BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780874|ref|YP_003065287.1| peptide chain release factor 1
[Candidatus Liberibacter asiaticus str. psy62]
         (357 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|15890803|ref|NP_356475.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58]
 gi|22096038|sp|Q8U8B8|RF1_AGRT5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15159088|gb|AAK89260.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58]
          Length = 360

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 231/357 (64%), Positives = 293/357 (82%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P++ KI  Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPAADVYVKLASEYSELEPVVKKIRDYEKAISEAA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D  +D ++RDLA++E+  +E  IRELE ++  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DLEALLADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER+AA + WKVEVLS+S+ + GGYKEI+ATI+GRGVFS++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEIIATITGRGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEASGR+HTSAATVAVLPEA +IDV+I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTG++VTSSEKSQHQNR +AM+VLR+RLYD+ER+++ +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPTGLIVTSSEKSQHQNRAKAMQVLRSRLYDIERQKVDSERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G ID++++ L+  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGEIDELVDALIADYQAGQLAQLGE 357


>gi|84686944|ref|ZP_01014828.1| peptide chain release factor 1 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665141|gb|EAQ11621.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2654]
          Length = 351

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 192/354 (54%), Positives = 256/354 (72%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E +MS+  S D   ++  EYA + P++ +I+ + Q   + +D 
Sbjct: 1   MVPLDKLDAITQRFQFLEAKMSQGLSGDEIAEVGREYAELKPVVEEIAAFRQLLSDIEDA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD E+R+LA+ E+  + + +  +E  +   LLP+D  D +  ++EIR GTGG
Sbjct: 61  EAML----SDPEMRELAEDELPGLRERLPVMEQAMRVALLPRDAADARPAMVEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF GDL RMY+RYA  R WK + L  S  + GG KE+VA +SG GVF+R+KFESGV
Sbjct: 117 DEASLFAGDLLRMYQRYAEARGWKFDTLEQSLTEVGGVKEVVARVSGDGVFARLKFESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   DIRIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAEDVDIHIDPADIRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTGI+VTSSEKSQH+NR  AM+VL+ RL+D ER+R  +ER++ RK Q+GSGDR
Sbjct: 237 AVRITHIPTGIVVTSSEKSQHRNREIAMQVLKTRLFDAERQRAHDERASARKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLYKL  V+QG +D++I+ L+ A QA  +    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYKLGDVMQGDLDEVIDALIEADQAAKLAELE 350


>gi|332716892|ref|YP_004444358.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
 gi|325063577|gb|ADY67267.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
          Length = 360

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 229/357 (64%), Positives = 292/357 (81%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P++ K+  Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPAADVYVKLASEYSELEPVVKKVREYEKAVSEAA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D  +D ++RDLA++E+  +E  I ELE E+  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DLQALLADKTTDKDMRDLAEMELPEVEARIGELEKEMQVLLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER+A+ + WKVEVLS+S+ + GGYKEI+ATISGRGVFS++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERFASAKGWKVEVLSASEGEAGGYKEIIATISGRGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEASGR+HTSAATVAVLPEA +IDV+I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTG++VTSSEKSQHQNR +AM+VLR+RLYD+ER+++ +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPTGLIVTSSEKSQHQNRAKAMQVLRSRLYDIERQKVESERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ID++++ L+  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMIEGEIDELVDALIADYQAGQLAQLGE 357


>gi|119361587|sp|Q2K3T1|RF1_RHIEC RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 359

 Score =  311 bits (797), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 227/357 (63%), Positives = 289/357 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P+++KI  Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPAADVYVKLASEYSELQPVVTKIRAYEKAVAELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL T++ D + D E+RDLA++E+  +   I  LE E+  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DLETLLEDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER+A+ + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGI+VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPTGIVVTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 357


>gi|114768932|ref|ZP_01446558.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255]
 gi|114549849|gb|EAU52730.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255]
          Length = 351

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 185/354 (52%), Positives = 260/354 (73%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +S +++  +  RF  +E +M++  +VD   KL++EY+ + P++ +I  Y     +  + 
Sbjct: 1   MVSQEKLEQICARFDYLEAKMADGSAVDEIAKLSKEYSDLKPVVDQIENYKATLLDISEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E++ LA+ E+  +++++  LE+++   LLPKD  DDK  I+EIRAGTGG
Sbjct: 61  EEMLL----DPELKVLAEEELPNLKEKLPILEHKLLLSLLPKDEADDKPAIIEIRAGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY R+   + WK E++  ++ + GGYKE +  + G GVF+R+K+ESGV
Sbjct: 117 DEAALFAGDLLRMYNRFCEDQGWKFEIVEGNETELGGYKEAIINVKGVGVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GRVHTSAATVA++PEA  ID++IP  DIR+DT R+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPTTESGGRVHTSAATVAIMPEAENIDLEIPTTDIRLDTYRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM VLR RLYD++R++ A+ER+A RK Q+GSGDR
Sbjct: 237 AVRITHLPTGLIVTSSEKSQHRNREIAMNVLRTRLYDLQRQQAADERAATRKDQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR++DHRINLTLYKL+ V+QG +++ I+ L    QA  +   +
Sbjct: 297 SERIRTYNFPQGRVSDHRINLTLYKLDQVMQGDLNEFIDALTADDQATKLSELN 350


>gi|260888149|ref|ZP_05899412.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|330840016|ref|YP_004414596.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|260862178|gb|EEX76678.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|329747780|gb|AEC01137.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
          Length = 355

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 248/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ ++ E+E  +S+   +     + KL+ E+A ++P++ K   Y + ++   +
Sbjct: 1   MLDKLHAVEEKYRELESLISDPAVLADMPKWQKLSREHAQLAPVVEKYREYKKVREGLLE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  D N D+++R LA+ E+  +   +  LE E+  LLLPKD +D K+ I+EIR G G
Sbjct: 61  AKAIF-DDNPDADMRRLAEEEIAELRPRLEALERELPILLLPKDPNDAKNVIVEIRGGVG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  R W+V+V+  +  + GG+KEI  ++ G G +S +K+ESG
Sbjct: 120 GEEAALFAGDLFRMYARYAERRGWRVDVIDKNATEIGGFKEIAFSVDGAGAYSFLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+SGR+HTSA TVAVLPEA E++V+I   D+RIDT  ASG+GGQ+VN T+
Sbjct: 180 THRVQRVPVTESSGRIHTSAVTVAVLPEAEEVEVEIAPADLRIDTYCASGAGGQYVNRTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +A+RITH+PTGI+V    EKSQ +N+ +AM+VLRAR+ +  R+  A   +A+RK Q+GSG
Sbjct: 240 TAIRITHLPTGIVVQCQDEKSQLKNKEKAMRVLRARILEAAREEQAATVAADRKSQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTL+KL  VL G +D+++  L+TA QA+ +  A 
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLHKLAAVLDGDLDELLAALITADQAEKLRQAE 355


>gi|222149911|ref|YP_002550868.1| peptide chain release factor 1 [Agrobacterium vitis S4]
 gi|254790856|sp|B9JT13|RF1_AGRVS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221736893|gb|ACM37856.1| peptide chain release factor 1 [Agrobacterium vitis S4]
          Length = 359

 Score =  310 bits (793), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 223/357 (62%), Positives = 284/357 (79%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P++  I      ++E  
Sbjct: 1   MAKLPVDKMRELERRFGEIEARMSAGPAADVYVKLASEYSELQPVVKAIRELGLAEKEVA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D ++D E+RDLA++E+  +E  +  LE EI   LLPKD  D+KS ILEIRAGT
Sbjct: 61  DLKALLADKSTDREMRDLAEMELPDVEARLEGLEKEIQIQLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER+AA + WKVEVLSSS+ D GG+KEI+AT++GRGVFS++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIATVTGRGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPEA EID+++  EDIRIDTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEAEEIDIEVRAEDIRIDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTG++VTSSEKSQHQNR +AM+VLR+RL+D+ER+R  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPTGLVVTSSEKSQHQNRAKAMQVLRSRLFDMERQRADSERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ ++ G ID++++ L+  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMMMGEIDEVVDALIADYQAGQLAQLGE 357


>gi|259418822|ref|ZP_05742739.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
 gi|259345044|gb|EEW56898.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
          Length = 444

 Score =  309 bits (792), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 186/355 (52%), Positives = 259/355 (72%), Gaps = 5/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  R+  +E  M++        KL +EY+ + P+  +I  Y Q   +  + 
Sbjct: 95  MIPEDRLEQILQRYQYLEAAMADGAG-GDIAKLAKEYSDLRPVAEQIRAYRQLLSDLAEA 153

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D +++ LA+ E+  ++  + E E+ +   LLPKD  D ++ ILEIR GTGG
Sbjct: 154 EEMLA----DPDMKALAEEEIPTLKAALPEAEHALQLALLPKDEADSRAAILEIRPGTGG 209

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL+RMY RYA  + WK++V+    ++ GG KE+VA I+G GVF+R+K+ESGV
Sbjct: 210 DEAALFAGDLYRMYSRYAEAQGWKIDVIEEQVSELGGLKELVARINGDGVFARLKYESGV 269

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 270 HRVQRVPVTESGGRIHTSAATVAVLPEAEDVDIKIDANDLRIDTMRSSGAGGQHVNTTDS 329

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM+VL+ RLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 330 AVRITHLPTGLVVTSSEKSQHRNREIAMQVLKTRLYDLERQRIDSERSADRASQVGSGDR 389

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR++DHRINLTLYKLE ++ G +D+II+ L++ HQAK++    +
Sbjct: 390 SERIRTYNFPQGRMSDHRINLTLYKLEQIMGGDLDEIIDALISEHQAKLLAEMGQ 444


>gi|222087303|ref|YP_002545840.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
 gi|254790855|sp|B9JB75|RF1_AGRRK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221724751|gb|ACM27907.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
          Length = 359

 Score =  309 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 226/357 (63%), Positives = 288/357 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P+++KI  Y++   E  
Sbjct: 1   MANLPIEKMRELERRFGEIEARMSAGPAADVYVKLASEYSELQPVVAKIRDYEKAIAEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D + D E+RDLA +E+  +++ I  LE +I  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DLEAMLADKSVDREMRDLADMELPEVKERIEVLEQDIQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER+AA   WKVE+LS+SD + GGYKE++ATI+G+GVFSR+KFES
Sbjct: 121 GGSEAALFGGDLFRMYERFAANNGWKVEILSASDGEAGGYKEVIATITGKGVFSRLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+P+GI+VTSSEKSQHQNR +AM+VLR+RL+D+ER+R  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPSGIVVTSSEKSQHQNRAKAMQVLRSRLFDMERQRADSERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ID++++ L   +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGEIDEVVDALRADYQASQLAQLGE 357


>gi|159044282|ref|YP_001533076.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
 gi|189039970|sp|A8LLU7|RF1_DINSH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157912042|gb|ABV93475.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
          Length = 351

 Score =  309 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 195/354 (55%), Positives = 260/354 (73%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  IE RM+   + +    L  EYA + P++++I+ Y + + +  + 
Sbjct: 1   MVPTEKLAQITERFEYIEARMAAGAAGEDIAALGREYAELKPVVAEIAAYSRARADLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R LA+ E+ A++  I E+E  +   LLPKD  D +  ++EIR GTGG
Sbjct: 61  EAML----DDPEMRALAEEEIPALKARIPEMEQALRLALLPKDAADARPAMIEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  + W+ +++S S  + GG KE++A +SG GVF+++K+ESGV
Sbjct: 117 EEAALFAGDLLRMYQRYAEAQGWRFQIVSESLTELGGIKEVIAHVSGSGVFAKLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA  +D+DIP  DIRIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPVTESGGRIHTSAATVAVLPEAEAVDIDIPASDIRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTG++VTSSEKSQH+NR  AM+VLRARLYD+ER+R   ERSA RK Q+GSGDR
Sbjct: 237 AVRITHIPTGLVVTSSEKSQHRNRDIAMQVLRARLYDLERQRADAERSAARKGQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLYKL+ V+QG +D++I  L    QA+++    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYKLDQVMQGDLDEVIAALAADDQARLLAEVE 350


>gi|254488030|ref|ZP_05101235.1| peptide chain release factor 1 [Roseobacter sp. GAI101]
 gi|214044899|gb|EEB85537.1| peptide chain release factor 1 [Roseobacter sp. GAI101]
          Length = 371

 Score =  308 bits (789), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 192/356 (53%), Positives = 255/356 (71%), Gaps = 4/356 (1%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +   ++  +  RF  +E  MS       + KL +EYA + P++ +I  Y Q  Q+  D
Sbjct: 20  AMIPMDRLAQITQRFQFLEASMSAGSDGADFAKLAKEYADLRPVVEQIEGYRQLLQDMDD 79

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E+ +LA+ E+  ++ EI + E  +   LLPKD  D K  +LEIR GTG
Sbjct: 80  ARAMLK----DPEMAELAEEELPRLKAEIPKAEASLQLALLPKDAADTKPAMLEIRPGTG 135

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL RMY+RYA  + WK +++     + GG KE+VA I G+ VF+R+K+ESG
Sbjct: 136 GDEAALFAADLLRMYQRYAEAQGWKFDLIEEQLTELGGVKEVVAHIKGQNVFARLKYESG 195

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP+TE+ GR+HTSAATVAVLPEA ++D+ +   D+RIDTMR+SG+GGQHVNTTD
Sbjct: 196 VHRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHVDPNDLRIDTMRSSGAGGQHVNTTD 255

Query: 242 SAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           SAVRITHIPTGI+VTSSEKSQH+NR  AM+VL+ARLYD ER+R+ +ERSA+R  Q+GSGD
Sbjct: 256 SAVRITHIPTGIVVTSSEKSQHRNREIAMQVLKARLYDAERQRVDSERSADRAAQVGSGD 315

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGR+TDHRINLTLY+L+ +LQG +D+II+ L    QA+M+    +
Sbjct: 316 RSERIRTYNFPQGRMTDHRINLTLYRLDAILQGDLDEIIDALTADAQARMLAEMGQ 371


>gi|150397700|ref|YP_001328167.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
 gi|166223607|sp|A6UCF2|RF1_SINMW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150029215|gb|ABR61332.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
          Length = 360

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 231/357 (64%), Positives = 290/357 (81%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  PS D Y+KL  EY+ + P++SKI  Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPSADVYVKLASEYSELQPVVSKIRAYEKATAELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  ++ D  +D ++RDLA++E   IE+ +  LE EI  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DIGAMLADRATDKDMRDLAELEKPEIEERVEALEQEIQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYAA + W+VEVLS+S+ + GGYKEI+AT+SGRGVFSR+KFES
Sbjct: 121 GGSEAALFAGDLFRMYERYAAGKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID+DI  EDIR+DTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIDIRSEDIRVDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTG++VTSSEKSQHQNR +AM+VLR+RLYD+ER+R  +ERSA+R+ Q+GSG
Sbjct: 241 DSAVRITHLPTGLVVTSSEKSQHQNRAKAMQVLRSRLYDMERQRADSERSADRRNQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLT+YKL+ V++G ID+I++ LL  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRLTDHRINLTIYKLDRVMEGEIDEIVDALLADYQASQLALLGE 357


>gi|89054297|ref|YP_509748.1| peptide chain release factor 1 [Jannaschia sp. CCS1]
 gi|119361551|sp|Q28RD9|RF1_JANSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88863846|gb|ABD54723.1| bacterial peptide chain release factor 1 (bRF-1) [Jannaschia sp.
           CCS1]
          Length = 354

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 187/352 (53%), Positives = 250/352 (71%), Gaps = 4/352 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++  + +RF  +E +++  P      K++ EYA + P++++I+ Y+Q   +  +  
Sbjct: 5   LPRDRLRQITDRFEYLEAQLNGGPDPSDIAKISREYAELKPVVAEIAGYEQLLADMAEAQ 64

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D ++R LA+ E+  +E  I   E  +   LLPKD  D K  ++EIR GTGG 
Sbjct: 65  NMLA----DPDMRPLAEEELPRLEAAIPAAEQSLQLALLPKDAADAKPAMIEIRPGTGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL RMY RYA  R W++E++   ++D GG KE  A + G  VF+R+KFESGVH
Sbjct: 121 EAALFAGDLLRMYTRYAEARGWRLEIVDLQESDLGGIKECTARVEGENVFARLKFESGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTSAATVAVLPEA ++D+DIP  DIRIDTMRASG+GGQHVNTTDSA
Sbjct: 181 RVQRVPETESGGRIHTSAATVAVLPEAEDVDIDIPATDIRIDTMRASGAGGQHVNTTDSA 240

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+P+GI+V SSEKSQH+NR  AM+ LR RLYD+ER++  +  +A+RK QIGSGDRS
Sbjct: 241 VRITHVPSGIVVVSSEKSQHRNREIAMQTLRTRLYDLERQKADDAMAADRKAQIGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           ERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D+I++ L    QA  +   
Sbjct: 301 ERIRTYNFPQGRMTDHRINLTLYKLDAVMLGDLDEIVDALTAEDQAMKLAEM 352


>gi|310829178|ref|YP_003961535.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
 gi|308740912|gb|ADO38572.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
          Length = 357

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 173/357 (48%), Positives = 258/357 (72%), Gaps = 4/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L +++ E+  ++++   +     + KL +E+A I PII++ + Y +  +  ++
Sbjct: 1   MLEKLDFLSSKYQELNEKIADPDIIADQAQWQKLMKEHAHIEPIINRYNEYKKTLEGIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D +  ++ + E+  + +    LE+E+  LLLPKD +DDK+ I+EIRAG G
Sbjct: 61  SKEMLSDKSIDKDFEEMCKAELDELTERKAALEDELKVLLLPKDPNDDKNVIVEIRAGAG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           GSEAALF GDLFRM+ RYA  + WK E+++S+  D GG KEI  +I GRG +SR+K+ESG
Sbjct: 121 GSEAALFAGDLFRMFTRYAERQGWKSEIMNSNIPDIGGIKEITFSIEGRGAYSRLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P+TE+ GR+HTS ATVAVLPEA ++++DI   D+RID  R+SG+GGQ VNTTD
Sbjct: 181 VHRVQRIPSTESGGRIHTSTATVAVLPEAEDVEIDINPNDLRIDVYRSSGNGGQCVNTTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH PTG++V    EKSQ +N+ +AMKVL+ARL+++E ++  +E + NRK Q+G+G
Sbjct: 241 SAVRITHEPTGMVVTCQDEKSQLKNKEKAMKVLKARLFEIEMQKQQSEIAENRKSQVGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRI +T+Y+LE  L G ID++++ L+T+ QA+ +    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRIGMTVYQLEAFLDGEIDEMVDALITSDQAEKLKQQGE 357


>gi|209551100|ref|YP_002283017.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|238054472|sp|B5ZRR4|RF1_RHILW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209536856|gb|ACI56791.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 359

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 227/357 (63%), Positives = 292/357 (81%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P+++KI  Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPAADVYVKLASEYSELQPVVTKIRAYEKAIAELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL T++ D + D E+RDLA++E+  ++++I  LE E+  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DLETLLEDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER++A + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+P+GI+VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPSGIVVTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGRITDHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRITDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 357


>gi|307321056|ref|ZP_07600462.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
 gi|306893331|gb|EFN24111.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
          Length = 360

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 233/357 (65%), Positives = 292/357 (81%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  PS D Y+KL  EY+ + P++SKI  Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPSADVYVKLASEYSELQPVVSKIRAYEKATAELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  ++ D  +D ++RDLA++E   +E++I  LE EI  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DIAAMLADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF G+LFRMYERYAA + W+VEVLS+S+ + GGYKEI+AT+SGRGVFSR+KFES
Sbjct: 121 GGSEAALFAGNLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEASGR+HTSAATVAVLPEA EID+D+  EDIR+DTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIDVRPEDIRVDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGI+VTSSEKSQHQNR +AM+VLR+RLYD+ER+R  +ERSA+R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIVVTSSEKSQHQNRAKAMQVLRSRLYDMERQRADSERSADRRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G IDD+++ LL  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGEIDDVVDALLADYQASQLALLGE 357


>gi|241206502|ref|YP_002977598.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860392|gb|ACS58059.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 359

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 226/357 (63%), Positives = 293/357 (82%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P+++KI +Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPAADVYVKLASEYSELQPVVTKIRVYEKAVAELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL T++ D + D E+R+LA++E+  ++++I  LE E+  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DLETLLEDRSVDREMRELAELELPEVKEQIEVLEQEMQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER+AA + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+P+GI+VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPSGIVVTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 357


>gi|116254019|ref|YP_769857.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|119361588|sp|Q1MBB2|RF1_RHIL3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115258667|emb|CAK09771.1| putative peptide chain release factor 1 [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 359

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 226/357 (63%), Positives = 293/357 (82%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P+++KI +Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPAADVYVKLASEYSELQPVVTKIRVYEKAVTELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL T++ D + D E+RDLA++E+  ++++I  LE E+  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DLETLLEDRSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER+AA + WKVEVLS+S+ + GGYKEI+ATI+G+GVF+++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGKGVFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+P+GI+VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPSGIVVTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 357


>gi|15966364|ref|NP_386717.1| peptide chain release factor 1 [Sinorhizobium meliloti 1021]
 gi|307313049|ref|ZP_07592676.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
 gi|20139338|sp|Q92MK5|RF1_RHIME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15075635|emb|CAC47190.1| Probable peptide chain release factor 1 (RF-1) protein
           [Sinorhizobium meliloti 1021]
 gi|306899368|gb|EFN30002.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
          Length = 360

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 234/357 (65%), Positives = 292/357 (81%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  PS D Y+KL  EY+ + P++SKI  Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFGEIEARMSAGPSADVYVKLASEYSELQPVVSKIRAYEKATAELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  ++ D  +D ++RDLA++E   +E++I  LE EI  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DIAAMLADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYAA + W+VEVLS+S+ + GGYKEI+AT+SGRGVFSR+KFES
Sbjct: 121 GGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEASGR+HTSAATVAVLPEA EID+D+  EDIR+DTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIDVRPEDIRVDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGI+VTSSEKSQHQNR +AM+VLR+RLYD+ER+R  +ERSA+R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIVVTSSEKSQHQNRAKAMQVLRSRLYDMERQRADSERSADRRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G IDD+++ LL  +QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGEIDDVVDALLADYQASQLALLGE 357


>gi|83942386|ref|ZP_00954847.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
 gi|83846479|gb|EAP84355.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
          Length = 351

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 190/355 (53%), Positives = 256/355 (72%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E  MS       + KL +EYA + P++ +I  Y Q  Q+  D 
Sbjct: 1   MIPMDRLAQITQRFQFLEASMSAGSDGADFAKLAKEYADLRPVVEQIDAYRQLLQDMDDA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+ +LA+ E+  ++  + + E ++   LLP+D  D K  +LEIR GTGG
Sbjct: 61  RAMLK----DPEMAELAEEELPRLKAALPQAEADLQLALLPRDEADKKPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL RMY+RYA  R WKVE++     + GG KE+VA I G  VF+R+K+ESGV
Sbjct: 117 DEAALFAADLLRMYQRYAEARGWKVELIEQQFTELGGVKEVVAHIKGENVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP+TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM+VL+ARLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHLPTGLVVTSSEKSQHRNREIAMQVLKARLYDMERQRVDSERSASRAAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLY+LE V+QG +D+I++ L    QA+++    +
Sbjct: 297 SERIRTYNFPQGRLTDHRINLTLYRLEAVMQGDLDEIVDALTADAQAQLLAEMGQ 351


>gi|306844842|ref|ZP_07477425.1| peptide chain release factor 1 [Brucella sp. BO1]
 gi|306274774|gb|EFM56555.1| peptide chain release factor 1 [Brucella sp. BO1]
          Length = 359

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 280/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      ++E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARKEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 357


>gi|163759877|ref|ZP_02166961.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
 gi|162282835|gb|EDQ33122.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
          Length = 361

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 225/357 (63%), Positives = 288/357 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  ++I +L+ RF E+E RM+  P  +AY+KL  EY+ + P++ +I   D    E  
Sbjct: 1   MARLPTEKIRELERRFGEVEARMAAGPDPEAYVKLASEYSDLQPLVDQIRALDAALAERS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D  +D E+RDLA+ E+ + +  I ELE +I  +LLPKD  D++S ILEIRAGT
Sbjct: 61  DLEAMLQDTANDKEMRDLAESELRSTKVRIGELEEQIEIMLLPKDAADERSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYA+ RKWKVEVLS+S+ + GGYKEI+ATISG+GVF+R+KFES
Sbjct: 121 GGSEAALFAGDLFRMYERYASSRKWKVEVLSASEGEAGGYKEIIATISGKGVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSAATVAVLPEA +ID+++  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETESGGRIHTSAATVAVLPEAEDIDIEVRSEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTG++VTSSEKSQHQNR RAM+VLRARLYD+ER+R  +ERS +R+ Q+GSG
Sbjct: 241 DSAVRITHLPTGLVVTSSEKSQHQNRARAMQVLRARLYDMERQRADDERSQSRRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ ++ G ID++++ L++ HQA  + +  +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMMMGEIDEVVDALISDHQAGQLATLGD 357


>gi|83953606|ref|ZP_00962327.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
 gi|83841551|gb|EAP80720.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
          Length = 351

 Score =  305 bits (782), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 189/355 (53%), Positives = 256/355 (72%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E  MS       + KL +EYA + P++ +I  Y Q  Q+  D 
Sbjct: 1   MIPMDRLAQITQRFQFLEASMSAGSDGADFAKLAKEYADLRPVVEQIDAYRQLLQDMDDA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D+E+ +LA+ E+  ++  + + E ++   LLP+D  D K  +LEIR GTGG
Sbjct: 61  RAMLK----DTEMAELAEEELPRLKAALPQAEADLQLALLPRDEADKKPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL RMY+RYA  R WK E++     + GG KE+VA I G  VF+R+K+ESGV
Sbjct: 117 DEAALFAADLLRMYQRYAEARGWKFELIEQQFTELGGVKEVVAHIKGENVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP+TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM+VL+ARLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHLPTGLVVTSSEKSQHRNREIAMQVLKARLYDMERQRVDSERSASRAAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLY+LE V+QG +D+I++ L    QA+++    +
Sbjct: 297 SERIRTYNFPQGRLTDHRINLTLYRLEAVMQGDLDEIVDALTADAQAQLLAEMGQ 351


>gi|260433480|ref|ZP_05787451.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417308|gb|EEX10567.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 351

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 187/355 (52%), Positives = 259/355 (72%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  +E  MS+  S      L +EY+ + P++ +I+ + Q + +  + 
Sbjct: 1   MIPEERLEQITQRFQYLEAAMSDGASGGDIAALAKEYSDLKPVVEQIAAWRQLRADLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++G    D ++++LA+ E+  ++  I E E+ +   LLPKD  D +  +LEIR GTGG
Sbjct: 61  EAMLG----DPDMKELAEEEIPQLKARIPEAEHALQLALLPKDAADARPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R W+ E++     + GG KE+VA I G  VF+R+K+ESGV
Sbjct: 117 DEAALFAGDLLRMYQRYAEARGWQFEIIEEQHTELGGIKEVVAHIKGDNVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQIDPNDIRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VL+ RLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHLPTGIVVTSSEKSQHRNREIAMQVLKTRLYDLERQRIDSERSADRASQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLYKL+ ++QG +D++I+ L    QA+++   ++
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYKLDQIMQGDLDEVIDALTADDQARLLAEMAQ 351


>gi|163746457|ref|ZP_02153815.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
 gi|161380342|gb|EDQ04753.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
          Length = 351

 Score =  305 bits (781), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 190/354 (53%), Positives = 258/354 (72%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E  MS       +  L +EY+ + P++ +I +Y Q +++ ++ 
Sbjct: 1   MIPMHRLAQISQRFQFLEASMSAGSDGADFAALAKEYSDLKPVVDQIDLYQQLQRDLEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+ +LA+ E+  +   + E+E  +   LLP+D  D K  +LEIR GTGG
Sbjct: 61  QEMLK----DPEMAELAREELPRLRARLPEVEGALQLALLPRDAADAKPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R W  +++ S   + GG KE+VA I+G+ VF+R+KFESGV
Sbjct: 117 DEAALFAGDLLRMYQRYAEARGWGFDLIESQMTELGGVKEVVAHITGQNVFARLKFESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP+TE+ GR+HTSAATVAVLPEA ++D++I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIEINANDLRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTGI+VTSSEKSQH+NR +AM+VL+ARLYD+ER R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHIPTGIVVTSSEKSQHRNRDKAMQVLKARLYDMERGRIDSERSADRAAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY+LE V+QG +D+II+ L    QA+ +    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYRLEAVMQGDLDEIIDALTADAQARQLSEME 350


>gi|304438485|ref|ZP_07398425.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304368568|gb|EFM22253.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 354

 Score =  305 bits (781), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 173/358 (48%), Positives = 248/358 (69%), Gaps = 8/358 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  +++++ E+E  +S+   +     + + T E+AA++PI+     Y +     
Sbjct: 1   MLS--KLAAVEDKYRELETLLSDPSVMADMAVWQRYTREHAALTPIVEAYQSYRRALATI 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   ++ +   D+E++ +   E+   E E   L  E+  LLLP+D +DDK+ I+EIR G
Sbjct: 59  DEDKEMLAEA--DAEMKAMLTEEIAEAEAERDRLAAELPILLLPRDPNDDKNVIVEIRGG 116

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF   LFRMY RYA  + W+ EVLSS+  + GG+KEI   +SG G +S++K+E
Sbjct: 117 VGGEEAALFAASLFRMYARYAERQGWRTEVLSSNPTEIGGFKEITFLVSGAGAYSKLKYE 176

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQR+P TE+ GR+HTSA TVAVLPEA E++V I   D+RIDT  ASG+GGQ+VN 
Sbjct: 177 SGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEEVEVTIDPNDLRIDTYCASGAGGQYVNR 236

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T++A+RITHIPTGI+V    EKSQ +NR +AMKVLRARLYD  ++  A+  +A+R+ Q+G
Sbjct: 237 TETAIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQEQADAVAADRRSQVG 296

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHRI LTLYK++ V+ G +D+++  L+TA QA+ +  A+
Sbjct: 297 SGDRSERIRTYNFPQGRVTDHRIGLTLYKIDAVMDGELDELLAGLITADQAERLKQAN 354


>gi|265982882|ref|ZP_06095617.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306838261|ref|ZP_07471111.1| peptide chain release factor 1 [Brucella sp. NF 2653]
 gi|264661474|gb|EEZ31735.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306406664|gb|EFM62893.1| peptide chain release factor 1 [Brucella sp. NF 2653]
          Length = 359

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 219/357 (61%), Positives = 280/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      ++E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARKEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D+++N L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVNALISDHQTALLAELGE 357


>gi|149914649|ref|ZP_01903179.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
 gi|149811442|gb|EDM71277.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
          Length = 351

 Score =  305 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 193/356 (54%), Positives = 255/356 (71%), Gaps = 6/356 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  +   ++ ++  RF  +E +MS         KL  EYA + P++ +I  Y Q   + +
Sbjct: 1   MTMVPLDRLNEILQRFEYLEAQMSAGGG--DIAKLGREYAELRPVVEEIRAYRQVLDDLE 58

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++     D E+RDLA+ E+ A++    +LE ++   LLPKD  D +  ILEIR GT
Sbjct: 59  AARAMLA----DPEMRDLAEEELTALQARKPKLEEQLQLALLPKDKADARPAILEIRPGT 114

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDL RMY RYA  R W  E++  ++ + GG KE++A ++G  VF+R+KFES
Sbjct: 115 GGEEAALFAGDLLRMYHRYAEARGWSFEIIEQNETELGGIKEVIARVAGDHVFARLKFES 174

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSAATVAVLPEA ++DV I   D+RIDTMR+SG+GGQHVNTT
Sbjct: 175 GVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDVQIDPGDLRIDTMRSSGAGGQHVNTT 234

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGI+VTSSEKSQH+NR  AM+VL+ RLYD+ER+R A+ERSA+R  Q+G+G
Sbjct: 235 DSAVRITHLPTGIVVTSSEKSQHRNREIAMQVLKTRLYDLERQRAADERSASRAAQVGTG 294

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V+QG +D++I+ L    QA ++    
Sbjct: 295 DRSERIRTYNFPQGRMTDHRINLTLYKLDQVMQGDLDEVIDALRADAQATLLAEMG 350


>gi|260467160|ref|ZP_05813338.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
 gi|259029084|gb|EEW30382.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
          Length = 359

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 219/356 (61%), Positives = 277/356 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  +  RF  +E +MS  P+ DAY+K+  EYA +  +++K+      + E+ 
Sbjct: 1   MVNLPRDRMDQVVKRFEMLEAQMSAGPAPDAYVKMASEYAELQEMVAKVRALRSAEHEQA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D  +D+E+R LA+ ++  +E+ I  L+ +I  LLLP+D  DDK+ ILEIRAGT
Sbjct: 61  DLEAMLADKGTDAEMRALAEADLPGVEERIEALQKDIQLLLLPRDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA   W+ E +S+SD D GG+KEI+ATISGRGVF+ +KFES
Sbjct: 121 GGDEAALFAGDLFRMYERYAAEHGWRFETVSASDGDAGGFKEIIATISGRGVFAHLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEASGR+HTSAATVAVLPEA E+D+DI  EDIRIDTMRASGSGGQHVNTT
Sbjct: 181 GVHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIDIRAEDIRIDTMRASGSGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGIMV  +EKSQHQNR +AM++LRARLYD+ER +   ERS  RK Q+GSG
Sbjct: 241 DSAVRITHLPTGIMVVQAEKSQHQNRAKAMQILRARLYDMERSKADEERSEARKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D++I+ L+  HQ+K++    
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGELDEVIDALIADHQSKLLADIG 356


>gi|254780874|ref|YP_003065287.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040551|gb|ACT57347.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 357

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 357/357 (100%), Positives = 357/357 (100%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ
Sbjct: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT
Sbjct: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES
Sbjct: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT
Sbjct: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG
Sbjct: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE
Sbjct: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357


>gi|265993634|ref|ZP_06106191.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764615|gb|EEZ10536.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 372

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 280/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D+Y+KL  EY+ +  ++ KI      + E  
Sbjct: 14  MIALPQDRMDQLLKRFSMIESQMANNPDSDSYVKLASEYSELQDVVGKIRELSDARMEAS 73

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 74  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 133

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 134 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 193

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 194 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 253

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 254 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 313

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 314 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQTALLAELGE 370


>gi|62290730|ref|YP_222523.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941]
 gi|82700642|ref|YP_415216.1| peptide chain release factor 1 [Brucella melitensis biovar Abortus
           2308]
 gi|189024940|ref|YP_001935708.1| peptide chain release factor 1 [Brucella abortus S19]
 gi|254694507|ref|ZP_05156335.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|254696132|ref|ZP_05157960.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254707598|ref|ZP_05169426.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|256258272|ref|ZP_05463808.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|260545992|ref|ZP_05821732.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260760500|ref|ZP_05872843.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261214824|ref|ZP_05929105.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261315085|ref|ZP_05954282.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|75496230|sp|Q57B22|RF1_BRUAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361513|sp|Q2YLN8|RF1_BRUA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689404|sp|B2S825|RF1_BRUA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62196862|gb|AAX75162.1| PrfA, peptide chain release factor 1 [Brucella abortus bv. 1 str.
           9-941]
 gi|82616743|emb|CAJ11828.1| Class I peptide chain release factor domain:Peptide chain release
           factor 1:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189020512|gb|ACD73234.1| Class I peptide chain release factor domain protein [Brucella
           abortus S19]
 gi|260096099|gb|EEW79975.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260670932|gb|EEX57753.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260916431|gb|EEX83292.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261304111|gb|EEY07608.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
          Length = 359

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 217/357 (60%), Positives = 278/357 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA LF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 357


>gi|265996886|ref|ZP_06109443.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|262551354|gb|EEZ07344.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
          Length = 372

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 278/357 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 14  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 73

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 74  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 133

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS +KFES
Sbjct: 134 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFES 193

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 194 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 253

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 254 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 313

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 314 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 370


>gi|163843895|ref|YP_001628299.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
 gi|189039961|sp|B0CIC3|RF1_BRUSI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163674618|gb|ABY38729.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
          Length = 359

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 217/357 (60%), Positives = 278/357 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+ T+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIITTVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 357


>gi|256158374|ref|ZP_05456272.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|256253793|ref|ZP_05459329.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|260169300|ref|ZP_05756111.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261758813|ref|ZP_06002522.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261738797|gb|EEY26793.1| peptide chain release factor 1 [Brucella sp. F5/99]
          Length = 359

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 278/357 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS +KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 357


>gi|23502722|ref|NP_698849.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161619787|ref|YP_001593674.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|254700516|ref|ZP_05162344.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|254704887|ref|ZP_05166715.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|254708865|ref|ZP_05170676.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|254713712|ref|ZP_05175523.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|254715938|ref|ZP_05177749.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|256030391|ref|ZP_05444005.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|256370269|ref|YP_003107780.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260567639|ref|ZP_05838109.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|261217701|ref|ZP_05931982.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261316358|ref|ZP_05955555.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261321452|ref|ZP_05960649.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261751020|ref|ZP_05994729.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261755581|ref|ZP_05999290.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|32171563|sp|Q8FYK3|RF1_BRUSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039960|sp|A9M8K5|RF1_BRUC2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23348737|gb|AAN30764.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161336598|gb|ABX62903.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|256000432|gb|ACU48831.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260157157|gb|EEW92237.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|260922790|gb|EEX89358.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261294142|gb|EEX97638.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261295581|gb|EEX99077.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261740773|gb|EEY28699.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261745334|gb|EEY33260.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
          Length = 359

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 279/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 357


>gi|294851112|ref|ZP_06791785.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
 gi|294819701|gb|EFG36700.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
          Length = 377

 Score =  304 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 279/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 19  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 78

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 79  DLAAMSDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 138

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 139 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 198

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 199 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 258

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 259 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 318

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 319 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 375


>gi|126725348|ref|ZP_01741190.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
 gi|126704552|gb|EBA03643.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
          Length = 421

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 187/353 (52%), Positives = 254/353 (71%), Gaps = 5/353 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E +++   + D  ++L+ EY+ + P+  +I  +    Q+    
Sbjct: 72  MVPMDKLYQITARFEFLEAKLASGET-DNIVELSREYSELKPVADQIMAFQTLVQDIDAA 130

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R+LA  E+  +   + + EN I  +LLPKDT D +  I+EIR GTGG
Sbjct: 131 EAML----DDPEMRELAAEELKELRDSLPDAENAIKLVLLPKDTADARPAIIEIRPGTGG 186

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA    WK E++    ++ GG KEI+A I G  VF ++KFESGV
Sbjct: 187 DEAALFAGDLLRMYQRYAESNGWKFEIIEEQVSELGGIKEIIANIKGTNVFGKLKFESGV 246

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+DIP  D+RIDTMRASG+GGQHVNTTDS
Sbjct: 247 HRVQRVPTTESGGRIHTSAATVAVLPEAEEVDLDIPASDLRIDTMRASGAGGQHVNTTDS 306

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++V S EKSQH+NR  AM+V+R+RLY++ER+++A+ER+A+RK Q+GSGDR
Sbjct: 307 AVRITHLPTGMIVVSMEKSQHRNREIAMQVMRSRLYEMERQKVADERAADRKSQVGSGDR 366

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D+II+ L    QA+ +   
Sbjct: 367 SERIRTYNFPQGRMTDHRINLTLYKLDQVMSGELDEIIDALHADDQAQKLAEL 419


>gi|316984833|gb|EFV63790.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
 gi|325140851|gb|EGC63361.1| peptide chain release factor 1 [Neisseria meningitidis CU385]
 gi|325144920|gb|EGC67204.1| peptide chain release factor 1 [Neisseria meningitidis M01-240013]
          Length = 385

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 28  MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 87

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +EIR
Sbjct: 88  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIR 143

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 144 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 203

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 204 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 263

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 264 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 323

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 324 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 383

Query: 356 SE 357
            +
Sbjct: 384 GD 385


>gi|260576769|ref|ZP_05844754.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
 gi|259021021|gb|EEW24332.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
          Length = 351

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 184/354 (51%), Positives = 248/354 (70%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  +E +++          L+ EY  + P++++IS Y +   +    
Sbjct: 1   MVPMEKLDQISRRFEFLEAKLAAGAGHAEIASLSREYTDLKPVVAEISAYRRALDDLAQA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R LA+ E+ +++  I ELE  +   LLPKD  D +  ILEIR GTGG
Sbjct: 61  EALLA----DPEMRPLAEEELPSLKARIPELEQALRLALLPKDAADARPAILEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL RMY+RYA  + W+ E++   D+D GG +++   + G GVF+++K+ESGV
Sbjct: 117 DEAALFAADLLRMYQRYAESQGWRFEIIDQQDSDLGGIRDVTVHVQGAGVFAKLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GRVHTSAATVAVLPEA E+D+DIP  DIRIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETESQGRVHTSAATVAVLPEAEEVDLDIPASDIRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTS++KSQH+NR  AM+VLRARLYD+ER R+   R+A+RK Q+GSGDR
Sbjct: 237 AVRITHLPTGIIVTSAQKSQHRNRDLAMQVLRARLYDLERARVDGARAADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY L  ++ G +  +I+ L+   QA  +    
Sbjct: 297 SERIRTYNFPQGRLTDHRINLTLYALPQIMAGDLGGVIDALVAQDQADKLAEME 350


>gi|256112206|ref|ZP_05453127.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 359

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 280/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D+Y+KL  EY+ +  ++ KI      + E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDSYVKLASEYSELQDVVGKIRELSDARMEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQTALLAELGE 357


>gi|237816235|ref|ZP_04595228.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260758776|ref|ZP_05871124.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260884577|ref|ZP_05896191.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297247116|ref|ZP_06930834.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
 gi|237788302|gb|EEP62517.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260669094|gb|EEX56034.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260874105|gb|EEX81174.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297174285|gb|EFH33632.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
          Length = 377

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 217/357 (60%), Positives = 278/357 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 19  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 78

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 79  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 138

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA LF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 139 GGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 198

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 199 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 258

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 259 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 318

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 319 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 375


>gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254790905|sp|B8GLA1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 361

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +  RF E+   +SE   +     + +L+ EY+ + P++     Y+  + 
Sbjct: 1   MKPSLLHRLEGVSERFQELAGLLSEPEVISDNARFRRLSMEYSQLEPVVEAFRRYEGAQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  D   D ++R +A+ E     + +  LE E+  LL+PKD  D  +  LEIR
Sbjct: 61  DLTAAREMQKDP--DPDLRAMAEDEAATAAERLETLELELQKLLIPKDPHDHSNLFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VE+LS S+ + GGYKE++A + G G +SR+K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAENQGWQVEILSQSEGEHGGYKEVIARLIGAGAYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVAV+PE  E++  +I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSAATVAVMPEPDEVEAPEINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+TH+PTGI+V    E+SQH+NR RAM +L A+L++ E+ R   E+SA RK 
Sbjct: 239 VNKTDSAIRLTHLPTGIVVECQDERSQHKNRARAMSLLAAKLFEAEQARQQAEQSATRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGRITDHRINLTLYKL+ V+ G +D +I PL+  HQA+ + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDAVMAGDLDPVIEPLINEHQAEKLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|148558947|ref|YP_001259697.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|265987430|ref|ZP_06099987.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|148370204|gb|ABQ60183.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|264659627|gb|EEZ29888.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
          Length = 377

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 279/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 19  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 78

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 79  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 138

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 139 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 198

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 199 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 258

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 259 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 318

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 319 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 375


>gi|86359340|ref|YP_471232.1| peptide chain release factor 1 [Rhizobium etli CFN 42]
 gi|86283442|gb|ABC92505.1| peptide chain release factor 1 protein [Rhizobium etli CFN 42]
          Length = 351

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 225/347 (64%), Positives = 284/347 (81%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +L+ RF EIE RMS  P+ D Y+KL  EY+ + P+++KI  Y++   E  DL T++ D +
Sbjct: 3   ELERRFGEIEARMSAGPAADVYVKLASEYSELQPVVTKIRAYEKAVAELADLETLLEDKS 62

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D E+RDLA++E+  +   I  LE E+  LLLPKD  D+KS ILEIRAGTGGSEAALF G
Sbjct: 63  VDREMRDLAELELPEVRARIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAALFAG 122

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           DLFRMYER+A+ + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFESGVHRVQRVP 
Sbjct: 123 DLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPE 182

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTTDSAVRITH+P
Sbjct: 183 TEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLP 242

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           TGI+VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSGDRSERIRTYN
Sbjct: 243 TGIVVTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSGDRSERIRTYN 302

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           F QGR+TDHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 303 FPQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 349


>gi|225628073|ref|ZP_03786108.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|261220926|ref|ZP_05935207.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|225616898|gb|EEH13945.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|260919510|gb|EEX86163.1| peptide chain release factor 1 [Brucella ceti B1/94]
          Length = 377

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 278/357 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 19  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 78

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 79  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 138

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS +KFES
Sbjct: 139 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFES 198

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 199 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 258

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 259 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 318

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 319 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 375


>gi|99080782|ref|YP_612936.1| peptide chain release factor 1 [Ruegeria sp. TM1040]
 gi|119361610|sp|Q1GI42|RF1_SILST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|99037062|gb|ABF63674.1| bacterial peptide chain release factor 1 (bRF-1) [Ruegeria sp.
           TM1040]
          Length = 350

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 186/355 (52%), Positives = 259/355 (72%), Gaps = 5/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  R+  +E  M++        KL +EY+ + P++ +IS Y Q   +  + 
Sbjct: 1   MIPEDRLQQILQRYQYLEAAMADGAG-GDIAKLAKEYSDLRPVVEQISAYQQLLSDLAEA 59

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D +++ LA+ E+  ++  + + E+ +   LLPKD  D ++ ILEIR GTGG
Sbjct: 60  EEMLA----DPDMKALAEEEIPTLKAALPQAEHALQLALLPKDEADSRAAILEIRPGTGG 115

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL+RMY RYA  + WKV+V+    ++ GG KE+VA I+G GVF+R+K+ESGV
Sbjct: 116 DEAALFAADLYRMYSRYAETQGWKVDVIEEQASELGGLKELVARINGDGVFARLKYESGV 175

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMRASG+GGQHVNTTDS
Sbjct: 176 HRVQRVPVTESGGRIHTSAATVAVLPEAEDVDIKIDANDLRIDTMRASGAGGQHVNTTDS 235

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM+VL+ RLYD+ER+R+  ERSA+R  Q+GSGDR
Sbjct: 236 AVRITHLPTGLVVTSSEKSQHRNREIAMQVLKTRLYDLERQRIDTERSADRASQVGSGDR 295

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR++DHRINLTLYKL+ ++ G +D+II+ L++ HQAK++    +
Sbjct: 296 SERIRTYNFPQGRMSDHRINLTLYKLDQIMGGDLDEIIDALISEHQAKLLAEMGQ 350


>gi|83644569|ref|YP_433004.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
 gi|119361548|sp|Q2SL95|RF1_HAHCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83632612|gb|ABC28579.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
          Length = 360

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 183/362 (50%), Positives = 258/362 (71%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK+R+ E+   +S+   +   + + +L++EYA + P++     Y     
Sbjct: 1   MKESIKLKLDLLKDRYEEVGALLSDPDIISVQEKFKELSKEYAELEPVVQCYQEYQNALN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++ D  SD+++R++A+ E+ A E+   +LE ++  LLLP+D  D  +  LEIR
Sbjct: 61  AIEESKLLLND--SDADMREMAKEELAAAEESSEQLEKDLQILLLPRDPRDGSNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA L+KWKVE++S S  + GGYKE+++ ++G  VF+ +K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAELKKWKVEIVSESPGEHGGYKEVISRVAGDNVFNLLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA+LPE  E+ DVDI   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAILPEVEEVGDVDINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR +AM +L+A+L    +++ A E++  RK 
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQDERSQHKNRAKAMSLLKAKLLSSAQEKQAKEQAQTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGRITDHRINLTLYKLE V+QG +D +I PLL  +QA+M+ S 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRITDHRINLTLYKLEEVVQGDLDPVIQPLLQEYQAEMLASI 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|161511164|ref|NP_539109.2| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|225853308|ref|YP_002733541.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260562790|ref|ZP_05833276.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|20139330|sp|Q8YJ95|RF1_BRUME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790867|sp|C0RFB5|RF1_BRUMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225641673|gb|ACO01587.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260152806|gb|EEW87898.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
          Length = 359

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 279/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQTALLAELGE 357


>gi|225023585|ref|ZP_03712777.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
 gi|224943680|gb|EEG24889.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
          Length = 358

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +S       ++ + +L +E+A ++P++     Y Q + 
Sbjct: 1   MKPSVLDKLQSLSERLEEVTALLSTPEATVDINRFRQLNQEHAELTPVVEAYRQYRQAES 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++     D E++D A  E+ A + +I  L+ E+  LLLPKD DD K+  LE+R
Sbjct: 61  DLADAEDMLA----DPEMKDFAAEEIEAAKAKIETLDTELQKLLLPKDEDDGKNIFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  DL RMY RYA   +W+VE++S++++D GGYKE++A I+G G + R+K
Sbjct: 117 AGTGGDEAALFAADLLRMYTRYAERNRWQVEIVSANESDLGGYKEVIARIAGIGAYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  ++ +   ++RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPAELRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|254504878|ref|ZP_05117029.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
 gi|222440949|gb|EEE47628.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
          Length = 357

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 198/356 (55%), Positives = 271/356 (76%), Gaps = 2/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L+  ++ +L +RFAE+E  MS +P   +Y+KL+ EYA + P++ KI    + +++ +  
Sbjct: 1   MLARHKLDNLLDRFAELEHMMSANPDPASYVKLSREYAGLEPLVLKIRALVKAEEDLKGA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I D  +D E+R+LA++E   + + +  L  ++   LLPKD  D    ILE+RAGTGG
Sbjct: 61  EDLIEDPATDPEMRELAELERDELSENVERLTQDVRIGLLPKDEADTNDAILEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYA LR WKVE+LS+S+ + GG+KE++A++SG  VF+R+KFESGV
Sbjct: 121 DEAALFAGDLFRMYQRYAELRGWKVEILSASEGEVGGFKEVIASVSGENVFARLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTSAATVAVLP+A  +D+D+   D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPATESGGRIHTSAATVAVLPQAENVDIDVQDSDLRIDTFRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI+V    E+SQH+N+ RAM++LRAR+YD ER+R A+ER+  R+LQ+GSGD
Sbjct: 241 AVRITHIPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERERAASERTEARRLQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRI LTLYKL+ ++ G  +D++I  L+  +QA ++ S  
Sbjct: 301 RSERIRTYNFPQGRVTDHRIGLTLYKLDQIIAGESLDEVIEALILDYQANLLASEE 356


>gi|313667936|ref|YP_004048220.1| peptide chain release factor I [Neisseria lactamica ST-640]
 gi|313005398|emb|CBN86832.1| peptide chain release factor I [Neisseria lactamica 020-06]
          Length = 358

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A +SP++     Y + + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDALDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|114766145|ref|ZP_01445149.1| peptide chain release factor 1 [Pelagibaca bermudensis HTCC2601]
 gi|114541605|gb|EAU44647.1| peptide chain release factor 1 [Roseovarius sp. HTCC2601]
          Length = 349

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 186/354 (52%), Positives = 245/354 (69%), Gaps = 6/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  ++ RF  +E RM+E         L  EYA + P++ +I  +   + +  + 
Sbjct: 1   MIPSDRLQQIRERFEYLEARMAEGSG--DIAALGREYAELRPVVDQIHDWTSLQADLAEA 58

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+++LA+ E+  +   + E E  +   LLPKD  D +  +LEIR GTGG
Sbjct: 59  EAML----DDPEMKELAEEELPGLRARLPEAEKALQLALLPKDAADARPAMLEIRPGTGG 114

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R W+ EV+     + GG +E+V  I G  VF+R+K+ESGV
Sbjct: 115 EEAALFAGDLARMYQRYAEARGWRWEVIEEQPTELGGLRELVVRIEGDNVFARLKYESGV 174

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA  +D+DI   DIRIDTMRASG+GGQHVNTTDS
Sbjct: 175 HRVQRVPETESGGRIHTSAATVAVLPEAEAVDIDIAAADIRIDTMRASGAGGQHVNTTDS 234

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTGI+VTSSEKSQH+NR  AM VLR RL+D+ER++ A+ R+++RK Q+GSGDR
Sbjct: 235 AVRITHIPTGIVVTSSEKSQHRNREIAMNVLRTRLFDLERQKAADARASDRKAQVGSGDR 294

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRI LTLY+LE +L G +D+II+ L    QA  +    
Sbjct: 295 SERIRTYNFPQGRMTDHRIGLTLYRLEQILAGDLDEIIDALTADAQAAQLAEMG 348


>gi|254671653|emb|CBA09383.1| peptide chain release factor 1 [Neisseria meningitidis alpha153]
          Length = 372

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 15  MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 74

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 75  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVR 130

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 131 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 190

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 191 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQH 250

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 251 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 310

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 311 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 370

Query: 356 SE 357
            +
Sbjct: 371 GD 372


>gi|261323819|ref|ZP_05963016.1| peptide chain release factor 1 [Brucella neotomae 5K33]
 gi|261299799|gb|EEY03296.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 372

 Score =  302 bits (773), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 217/357 (60%), Positives = 279/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 14  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 73

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 74  DVAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 133

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 134 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 193

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 194 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 253

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 254 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 313

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 314 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 370


>gi|256059849|ref|ZP_05450036.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 359

 Score =  302 bits (773), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 217/357 (60%), Positives = 279/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DVAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 357


>gi|187930213|ref|YP_001900700.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
 gi|238691828|sp|B2UDM7|RF1_RALPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187727103|gb|ACD28268.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
          Length = 360

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  EI   ++      ++D Y KLT E+A + P++++ + + Q ++
Sbjct: 1   MKPSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +      D +++  A+ E+ A  + +  LE E+  LLLPKD +D ++  +EIR
Sbjct: 61  DIATAQELAA----DPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++A + G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESPSDLGGYKEVIARLVGEGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA    D+ I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G ID+++  L   HQA+ + + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDAIMDGDIDELVGALAAEHQAEQLAAL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|254511294|ref|ZP_05123361.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
 gi|221535005|gb|EEE37993.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
          Length = 357

 Score =  302 bits (772), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 186/355 (52%), Positives = 257/355 (72%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  +E  M++  S      L +EY+ + P++ +I  + Q   +  + 
Sbjct: 7   MIPEERLEQITQRFQYLEAAMADGASGGDIAALAKEYSDLKPVVDQILGWRQLVADLAEA 66

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD ++++LA+ E+  ++  I E E+ +   LLP+D  D +  +LEIR GTGG
Sbjct: 67  EAML----SDPDMKELAEEEIPQLQARIPEAEHALQLALLPRDAADARPAMLEIRPGTGG 122

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R W+ E++    +D GG KE+VA I G  VF+RMK+ESGV
Sbjct: 123 DEAALFAGDLLRMYQRYAEGRGWQFEIIEEQASDLGGIKEVVAHIKGDNVFARMKYESGV 182

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 183 HRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQIDANDIRIDTMRSSGAGGQHVNTTDS 242

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+P+GI+VTSSEKSQH+NR  AM+VL+ RLYD+ER+R+ + RSA+R  Q+GSGDR
Sbjct: 243 AVRITHLPSGIVVTSSEKSQHRNREIAMQVLKTRLYDLERQRIDSARSADRASQVGSGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLYKL+ V+QG +D++I+ L    QA+++   ++
Sbjct: 303 SERIRTYNFPQGRMTDHRINLTLYKLDQVMQGDLDEVIDALTADDQARLLAEMAQ 357


>gi|261378877|ref|ZP_05983450.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
 gi|269144693|gb|EEZ71111.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
          Length = 358

 Score =  302 bits (772), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|265999301|ref|ZP_05465736.2| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|17982074|gb|AAL51373.1| bacterial peptide chain release factor 1 (rf-1) [Brucella
           melitensis bv. 1 str. 16M]
 gi|263093126|gb|EEZ17261.1| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|326409872|gb|ADZ66937.1| peptide chain release factor 1 [Brucella melitensis M28]
 gi|326539585|gb|ADZ87800.1| peptide chain release factor 1 [Brucella melitensis M5-90]
          Length = 377

 Score =  302 bits (772), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 218/357 (61%), Positives = 279/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 19  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 78

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 79  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 138

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 139 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 198

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 199 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 258

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 259 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 318

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 319 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQTALLAELGE 375


>gi|298369801|ref|ZP_06981117.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281261|gb|EFI22750.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 358

 Score =  302 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|261379805|ref|ZP_05984378.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
 gi|284797490|gb|EFC52837.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
          Length = 358

 Score =  302 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL A L D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAALLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|296313476|ref|ZP_06863417.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
 gi|296839995|gb|EFH23933.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
          Length = 358

 Score =  302 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|190893591|ref|YP_001980133.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
 gi|190698870|gb|ACE92955.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
          Length = 351

 Score =  302 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 225/347 (64%), Positives = 285/347 (82%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +L+ RF EIE RMS  P+ D Y+KL  EY+ + P+++KI  Y++   E  DL T++ D  
Sbjct: 3   ELERRFDEIEARMSAGPAADVYVKLASEYSELQPVVTKIRAYEKAVAELADLDTLLEDKA 62

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D E+RDLA++E+  +++ I  LE E+  LLLPKD  D+KS ILEIRAGTGGSEAALF G
Sbjct: 63  VDREMRDLAELELPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAALFAG 122

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           DLFRMYER+AA + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFESGVHRVQRVP 
Sbjct: 123 DLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPE 182

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTTDSAVRITH+P
Sbjct: 183 TEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLP 242

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           +GI+VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSGDRSERIRTYN
Sbjct: 243 SGIVVTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSGDRSERIRTYN 302

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           F QGR+TDHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 303 FPQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 349


>gi|255065586|ref|ZP_05317441.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
 gi|255050411|gb|EET45875.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
          Length = 358

 Score =  302 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y Q + 
Sbjct: 1   MKPSIIEKLQQLSDRLEEVTSLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQQAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKVKIDTLDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|319637760|ref|ZP_07992526.1| peptide chain release factor 1 [Neisseria mucosa C102]
 gi|317400915|gb|EFV81570.1| peptide chain release factor 1 [Neisseria mucosa C102]
          Length = 358

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|254476963|ref|ZP_05090349.1| peptide chain release factor 1 [Ruegeria sp. R11]
 gi|214031206|gb|EEB72041.1| peptide chain release factor 1 [Ruegeria sp. R11]
          Length = 351

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 185/355 (52%), Positives = 247/355 (69%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E  MS+  S +    L +EY+ + P+  +I  Y +   +  + 
Sbjct: 1   MIPEDRLEQILQRFQYLEAAMSDGASGEDIAALAKEYSDLRPVAEQIISYRRLLADLDEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D ++  LA+ E+  +   + E E  +   LLP+D  D K  +LEIR GTGG
Sbjct: 61  EQMLA----DPDMAALAEEELPGLRAALPEAEQALQLALLPRDAADSKPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  + W  E++     + GG KE+VA + G  VF+R+K+ESGV
Sbjct: 117 DEAALFAGDLLRMYQRYAEAQGWTFEIIEEQSTELGGLKEVVAHVKGNNVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I   D+RIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPVTESGGRIHTSAATVAVLPEAEEVDLRIDPADLRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTGI+V SSEKSQH+NR  AM+VLR RLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHIPTGIIVVSSEKSQHRNREIAMQVLRTRLYDLERQRIDSERSADRASQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR++DHRINLTLYKL+ ++QG +D+II+ L    QA+ +    +
Sbjct: 297 SERIRTYNFPQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQARRLAEMGQ 351


>gi|325128768|gb|EGC51631.1| peptide chain release factor 1 [Neisseria meningitidis N1568]
          Length = 358

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A +SP++     Y + + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELSPVVEVFQHYRRAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|261399946|ref|ZP_05986071.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
 gi|269210396|gb|EEZ76851.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
          Length = 358

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|260881387|ref|ZP_05404264.2| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
 gi|260849258|gb|EEX69265.1| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
          Length = 360

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 251/354 (70%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  +++++ E+E  +S+      +  +   T+E+AA++PII+K   Y +  +  ++  
Sbjct: 6   EKLQAVEDKYRELESLISDPETMADMAKWQAYTKEHAALTPIITKFRRYKEVLKGIEEAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++G+   D E+    + E+  + ++   L+ E+  LLLPKD +D+K+ I+EIR G GG 
Sbjct: 66  SMLGEA-LDHEMHAFVESELADLMEQKEALDKELPILLLPKDPNDEKNVIVEIRGGVGGE 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA  + WKVE++ ++  + GG+KE+   ++G G +S +K+ESG H
Sbjct: 125 EAALFAGDLFRMYSRYAEKKGWKVELMDANATEIGGFKEVTFMVTGYGAYSYLKYESGTH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTSAATVAVLPEA ++DV I   D+RIDT  ASG+GGQ+VN T++A
Sbjct: 185 RVQRVPVTESGGRIHTSAATVAVLPEAEDVDVAINPADLRIDTYCASGAGGQYVNRTETA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    EKSQ +N+ +AMKVLRAR+ D  R+      +A+R+ Q+GSGDR
Sbjct: 245 IRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARILDKARQEQEAAVAADRRSQVGSGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRI LTL+K++ +L G +D+++  L+TA QA+ +   +
Sbjct: 305 SERIRTYNFPQGRVTDHRIGLTLHKIDAILDGDLDELLAALITADQAERLKKVN 358


>gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
 gi|259585220|sp|C4XIQ1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
          Length = 357

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 179/354 (50%), Positives = 258/354 (72%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ ++E ++S    V     + KL++ ++ +S +++    Y +  Q+ +D   
Sbjct: 4   KLESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLEDNQE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   D EIR+LAQ E  A+++   ELE  +  LLLPKD  D+K+ +LEIRAGTGG E
Sbjct: 64  MAQDP--DPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGDE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  ++WKVE++S S+   GG+KE++A+ISG  V+SR+K+ESG HR
Sbjct: 122 AALFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSA TVA++PEA E+DV I   ++RID  R+SG GGQ VNTTDSAV
Sbjct: 182 VQRVPATESQGRIHTSAVTVAIMPEAEEVDVAIDPNELRIDVYRSSGPGGQSVNTTDSAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIP+G++V    EKSQH+N+ +A+KVLR+RL  VE+ +   E+ A R+ Q+G+GDRS
Sbjct: 242 RVTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQVEQDKQRAEQEAARRSQVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR+TDHRINLTLY+L+ VL+G +D++   L+  +QA+ + + ++
Sbjct: 302 ERIRTYNFPQGRVTDHRINLTLYRLDAVLEGDLDELCGALIGHYQAEALKAQAD 355


>gi|309378429|emb|CBX22924.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 358

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A +SP++     Y + + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D ++     + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKHEAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|218672481|ref|ZP_03522150.1| peptide chain release factor 1 [Rhizobium etli GR56]
          Length = 352

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 226/352 (64%), Positives = 290/352 (82%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + P+++KI  Y++   E  
Sbjct: 1   MAKLPVEKMRELERRFDEIEARMSAGPAADVYVKLASEYSELQPVVTKIRAYEKAVAELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL T++ D + D E+RDLA++E+  +++ I  LE E+  LLLPKD  D+KS ILEIRAGT
Sbjct: 61  DLDTLLEDKSVDREMRDLAELELPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYER+AA + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERFAAEKSWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+P+GI+VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHLPSGIVVTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G I+++++ L+  +QA  +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQL 352


>gi|304321558|ref|YP_003855201.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
 gi|303300460|gb|ADM10059.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
          Length = 360

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 195/356 (54%), Positives = 260/356 (73%), Gaps = 4/356 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  LK RFAE+E +M+++   D  ++L++E+A + P+     +    +Q   D 
Sbjct: 1   MIPQDKLNALKTRFAEVEAKMAKATEADEIVRLSKEHAELKPVAEAALLLTDARQGLLDA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +    ++D E+ ++A+ E+ ++  +I  LE ++  +LLPKD  D    ILE+RAGTGG
Sbjct: 61  EGLTK--STDPEMAEMAKEEIASLTGQIERLEADLQLMLLPKDKADQAPVILEVRAGTGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYAA R W+VE+LS++++  GGYKEI A +SG  VF R+KFESGV
Sbjct: 119 DEAALFAGDLFRMYQRYAATRGWRVEILSATESGVGGYKEIQANVSGDNVFGRLKFESGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAATVAVLPE  +ID+DI   D+RID  RASG GGQ VNTTDS
Sbjct: 179 HRVQRVPETETQGRIHTSAATVAVLPEPEDIDIDIQESDLRIDVFRASGPGGQSVNTTDS 238

Query: 243 AVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTG++V+  + KSQH+NR +AMKVLRARLY+ ER R+A ER+A RK Q+GSGD
Sbjct: 239 AVRITHIPTGVVVSQQDEKSQHKNRAKAMKVLRARLYEAERSRVAAERAAERKGQVGSGD 298

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLTLYKL+ V+ G  +DD+I+ L+   QA+ + +  
Sbjct: 299 RSERIRTYNFPQGRVTDHRINLTLYKLDKVIAGEAVDDLIDALIVEDQAERLAAME 354


>gi|53804790|ref|YP_113526.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
 gi|61214591|sp|Q60A21|RF1_METCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|53758551|gb|AAU92842.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
          Length = 360

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 177/355 (49%), Positives = 251/355 (70%), Gaps = 6/355 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +++ +L +RF EI   ++     +    +  L+ EYA + P ++    Y +  +     
Sbjct: 6   QQKLENLSHRFEEITGLLATPEVQNDQNRFKALSREYAQLEPCVACFRRYRETLEGLDHA 65

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D   D E+R LA+ E+    K    LE E+  LLLP+D +D+++  LE+RAGTGG
Sbjct: 66  QALLQDP--DPEVRSLAREELETGRKRCDALEQELQILLLPRDPNDERNVFLEVRAGTGG 123

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EAA+F GDL RMY RYA  + W+ E++S S+ + GGYKE+V  ISG+ V+SR+KFE+G 
Sbjct: 124 AEAAIFAGDLQRMYSRYAERQGWRAEIVSESEGEHGGYKEVVMRISGQNVYSRLKFEAGT 183

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GR+HTSA TVA+LPE  ++++DI   D+RIDT RASG+GGQHVN TDS
Sbjct: 184 HRVQRVPTTEAQGRIHTSACTVAILPEFDDVEIDINPADLRIDTFRASGAGGQHVNRTDS 243

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITHIPTG +V    E+SQH+NR RAM +L+AR+    +++  +E +A+RKLQ+GSGD
Sbjct: 244 AIRITHIPTGTVVECQDERSQHKNRARAMSLLQARILAAAQEKQNSEIAASRKLQVGSGD 303

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLT+Y+L+ +++G +D +I+PLL  HQA M+ S +
Sbjct: 304 RSERIRTYNFPQGRLTDHRINLTIYRLDAIMEGDLDPVIDPLLQEHQADMLASLA 358


>gi|163735803|ref|ZP_02143232.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
 gi|161390889|gb|EDQ15229.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
          Length = 351

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 190/355 (53%), Positives = 256/355 (72%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E  MS          L +EY+ + P++ +IS Y Q   + +D 
Sbjct: 1   MIPLDRLRQITERFQYLEAAMSTGDGGGDIATLAKEYSDLRPVVEQISAYQQLLNDLEDA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++G    D ++  LA+ E+  ++  + + E  +   LLPKD  D K  +LEIR GTGG
Sbjct: 61  AEMLG----DPDMAPLAEEEIPRLKSALPQAEAALQLALLPKDKADAKPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYA  + WKV+V+   + + GG KE+VA I G  VF+R+K+ESGV
Sbjct: 117 DEAALFAGDLFRMYQRYAETQGWKVDVIELQETELGGIKEVVAHIKGADVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP+TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHIEANDLRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM+VL+ARLYD+ER R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHLPTGLVVTSSEKSQHRNREIAMQVLKARLYDLERSRVDDERSADRAAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLY+L+ +LQG +D+II+ L    QA+++    +
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYRLDAILQGDLDEIIDALTAHAQAQLMADMGQ 351


>gi|15677534|ref|NP_274690.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
 gi|20139351|sp|Q9JY93|RF1_NEIMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|7226940|gb|AAF42034.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
 gi|325134780|gb|EGC57417.1| peptide chain release factor 1 [Neisseria meningitidis M13399]
 gi|325199720|gb|ADY95175.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
 gi|325205597|gb|ADZ01050.1| peptide chain release factor 1 [Neisseria meningitidis M04-240196]
          Length = 358

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|56697312|ref|YP_167678.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
 gi|81558450|sp|Q5LQM7|RF1_SILPO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56679049|gb|AAV95715.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
          Length = 351

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 187/355 (52%), Positives = 257/355 (72%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  +E  M++  S      L +EY+ + P++ +I+ + Q   +  + 
Sbjct: 1   MIPEERLDQITQRFQYLEAAMADGASGSDIAALAKEYSDLRPVVEQIAAWRQLCADMDEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD +++ LA+ E+  ++  + E E  +   LLPKD  D +  +LEIR GTGG
Sbjct: 61  RAML----SDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R WK+E++   + + GG KE+VA ISG  VF+R+K+ESGV
Sbjct: 117 DEAALFAGDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQIDPGDIRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+P+GI+VTSSEKSQH+NR  AM+VL+ RLYD+ER+R+  ERSA+R  Q+G+GDR
Sbjct: 237 AVRITHLPSGIVVTSSEKSQHRNREIAMQVLKTRLYDLERQRLDRERSASRSAQVGTGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLYKL+ V+QG +D++I+ L    QA+M+    +
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYKLDAVMQGDLDEVIDALAADGQARMLAEMGQ 351


>gi|188587462|ref|YP_001919007.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|229470350|sp|B2A3J0|RF1_NATTJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179352149|gb|ACB86419.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 357

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 175/356 (49%), Positives = 254/356 (71%), Gaps = 4/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ E+E  MS+   ++   KL   ++E+A++  I++K   Y + KQE ++
Sbjct: 1   MLDKLEGIEKRYQELEDLMSDPEVINDPEKLKQYSKEHASLEEIVNKYRQYLETKQEFEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +++ D ++ +  + E+  +E +++E+ + +  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  AKEMLEENDEDPDMEEFLKDEIPRLENQMQEIYDSLKILLLPKDPNDEKNVIVEIRAGAG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA +  WK E++ S + D GG+KEIV  I G+  +SR+KFESG
Sbjct: 121 GDEAALFAADLYRMYTRYAEIMNWKTEIMDSHEKDMGGFKEIVFMIEGKNAYSRLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP+TE+SGR+HTS ATVAVLPEA +++++I   ++RIDT  A+G GGQ VNTT 
Sbjct: 181 VHRVQRVPSTESSGRIHTSTATVAVLPEAEDVEIEIDTNELRIDTFCATGPGGQSVNTTQ 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH PTG++V    EKSQH+NR +AMKVLRAR+YD+  +    + +  RK Q+GSG
Sbjct: 241 SAVRITHEPTGVVVSCQDEKSQHKNRDKAMKVLRARIYDMYLEEQQQQEAEERKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGRITDHRIN T ++LE VL+G ID++I+ L+T  QA+ +    
Sbjct: 301 DRSERIRTYNFPQGRITDHRINFTTHRLEQVLEGEIDELIDALITTEQAEQLKKMG 356


>gi|304394129|ref|ZP_07376052.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
 gi|303293569|gb|EFL87946.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
          Length = 358

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 211/356 (59%), Positives = 277/356 (77%), Gaps = 1/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L  ++I  L +R AE+   MSE+P  + Y+KL +EYA + P++ KI      + E  DL
Sbjct: 1   MLPPEKIEQLVSRHAEVARLMSENPDQETYVKLAKEYAELDPVVIKIGEMQAAQSEFADL 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D ++D+E++++AQ E+  ++  I E E E+  LLLP+D  D K+ ILEIRAGTGG
Sbjct: 61  AGMLADGDTDAEMKEMAQAEMEPLKAAIEEHEAELQILLLPRDEADAKNAILEIRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           SEAALF GDLFRMY+R+A    WKV+VLS S  + GGYKEI+A+I+G GVF+R+KFESGV
Sbjct: 121 SEAALFAGDLFRMYQRHAETSGWKVDVLSESAGEVGGYKEIIASINGTGVFARLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GRVHTSAATVAVLPEA ++D++I  EDIRIDTMRASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESGGRVHTSAATVAVLPEAEDVDIEIRNEDIRIDTMRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTG++V S+EKSQHQNR  AMK LR RLYD+ER+++  ER+ +RK Q+GSGDR
Sbjct: 241 AVRITHIPTGVVVLSTEKSQHQNRANAMKELRTRLYDMERQKVDQERADSRKGQVGSGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR++DHRINLTLYKL+ ++ G  +D++++ L+T HQA ++ S  +
Sbjct: 301 SERIRTYNFPQGRVSDHRINLTLYKLDKMIAGEGLDEMLDALITDHQANLLASLGD 356


>gi|161870534|ref|YP_001599706.1| peptide chain release factor 1 [Neisseria meningitidis 053442]
 gi|189039981|sp|A9M1Q8|RF1_NEIM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161596087|gb|ABX73747.1| peptide chain release factor I [Neisseria meningitidis 053442]
          Length = 358

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|119383645|ref|YP_914701.1| peptide chain release factor 1 [Paracoccus denitrificans PD1222]
 gi|166223583|sp|A1B0G1|RF1_PARDP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119373412|gb|ABL69005.1| bacterial peptide chain release factor 1 (bRF-1) [Paracoccus
           denitrificans PD1222]
          Length = 351

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 191/355 (53%), Positives = 252/355 (70%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L   ++  +  RF  +E R++  P+ +    ++ EYA + P++++I+ +   +++ +  
Sbjct: 1   MLPEDRLIQIVERFEYLEARLNAGPAAEEIAAISREYAELKPVVAQIAQWRSVQEDIRQA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R+LAQ E+  +   +  LE+ +   LLP+D  D +  ILEIR GTGG
Sbjct: 61  QAMLA----DHEMRELAQDELSRLRAGLPALEHALRVALLPRDAADARPAILEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL  MY R+A  + W+ ++L    +D GG +E +A I G GVF+R+K+ESGV
Sbjct: 117 EEAALFAGDLLDMYRRFAESQGWQFQMLELVRSDLGGVREAMARIEGEGVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+DVDIP  DIRIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAEEVDVDIPAADIRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQHQNR  AM VLRARLYD+ER R   ER+A+RK Q+GSGDR
Sbjct: 237 AVRITHLPTGIVVTSSEKSQHQNRANAMAVLRARLYDMERSRADAERAADRKSQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLY L+ ++QG I +I+  L    QA  + +  E
Sbjct: 297 SERIRTYNFPQGRMTDHRIGLTLYALDRIMQGEIGEIVEALAAHDQAARLAAQGE 351


>gi|13472970|ref|NP_104537.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
 gi|20139342|sp|Q98G93|RF1_RHILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14023718|dbj|BAB50323.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
          Length = 359

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 218/356 (61%), Positives = 279/356 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  +  RF  +E +MS  P+ DAY+K+  EYA +  +++K+      + E+ 
Sbjct: 1   MVNLPRDRMDQVVKRFEMLEAQMSAGPAPDAYVKMASEYAELQDMVAKVRQLRSAEHEQA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D  +D+E+R LA+ ++  +E+ I  L+ +I  LLLPKD  DDK+ ILEIRAGT
Sbjct: 61  DLEAMLADKGTDAEMRALAEADLPDVEERIEALQKDIQILLLPKDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA R W+ E +S+SD D GG+KEI+AT+SG+GVF+ +KFES
Sbjct: 121 GGDEAALFAGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIATVSGKGVFAHLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEASGR+HTSAATVAVLPEA E+D++I  EDIRIDTMRASGSGGQHVNTT
Sbjct: 181 GVHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIEIRAEDIRIDTMRASGSGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGIMV  +EKSQHQNR +AM++LRARLYD+ER +   ERS +RK Q+GSG
Sbjct: 241 DSAVRITHLPTGIMVVQAEKSQHQNRAKAMQILRARLYDLERSKADEERSESRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D+I++ L+  HQ+K++    
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGELDEIVDALIADHQSKLLADIG 356


>gi|315122704|ref|YP_004063193.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496106|gb|ADR52705.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 357

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 311/357 (87%), Positives = 331/357 (92%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MVFLSHKQ+C+LKNRF+EIELRMSESPSVD YIKLTEEYAAISPIISKI IY++KK EEQ
Sbjct: 1   MVFLSHKQVCNLKNRFSEIELRMSESPSVDVYIKLTEEYAAISPIISKIDIYEKKKGEEQ 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL T+I D +SD  IRDLA+ E+  +EKEI+ LE EI+ LLLPKDTDDDKSCILEIRAGT
Sbjct: 61  DLRTIIDDQDSDLGIRDLAKAEIGEVEKEIKALEYEISCLLLPKDTDDDKSCILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALFVGDLFRMYERYA  +KWKVE+LSSSDNDDGGYKEIVATISG GVF RMKFES
Sbjct: 121 GGSEAALFVGDLFRMYERYATYQKWKVEILSSSDNDDGGYKEIVATISGNGVFYRMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEASGRVHTSAATVAVLPEA EIDV I  EDIRIDTMRASGSGGQHVNTT
Sbjct: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAEEIDVAIATEDIRIDTMRASGSGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMVTSSEKSQHQNRL+AMKVLRARLYD+ERKRMA+ERS NRK QIGSG
Sbjct: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLQAMKVLRARLYDIERKRMAHERSENRKAQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGRITDHRINLTLYKLEYVLQGY+D+I+N LLTAHQAKMIGSASE
Sbjct: 301 DRSERIRTYNFPQGRITDHRINLTLYKLEYVLQGYLDEIVNALLTAHQAKMIGSASE 357


>gi|78044074|ref|YP_361356.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|119361519|sp|Q3A928|RF1_CARHZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77996189|gb|ABB15088.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 180/352 (51%), Positives = 246/352 (69%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L+ ++ E+   +S+   +    +     + +A I  I+     Y +  +E +D  
Sbjct: 3   DKLDQLEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIEDAE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D + R+L Q E+  +++   ELE ++  LLLPKD +D+K+ I+EIRAG GG 
Sbjct: 63  RML-DEKLDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA    WKVE++ S   D GG+KE++ TI G+GV+SRMKFESGVH
Sbjct: 122 EAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++V+I   D+RID   ASG+GGQHVN T+SA
Sbjct: 182 RVQRVPTTESGGRIHTSTATVAVLPEAEEVEVEINPNDLRIDVFCASGAGGQHVNKTESA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V    EKSQH+N+ RAMK+LRARL D  R+    E ++ RK Q+G+GDR
Sbjct: 242 VRITHIPTGIVVTCQDEKSQHKNKERAMKILRARLLDKARQEQEAELASARKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYNF Q R+TDHRI LTL++L+ VL+G +D+II+ L+T  QA+ +  
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTLHRLDAVLEGDLDEIIDALITTDQAERLKQ 353


>gi|260427219|ref|ZP_05781198.1| peptide chain release factor 1 [Citreicella sp. SE45]
 gi|260421711|gb|EEX14962.1| peptide chain release factor 1 [Citreicella sp. SE45]
          Length = 349

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 184/354 (51%), Positives = 249/354 (70%), Gaps = 6/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  ++ RF  +E RM+E         L  EYA + P++ +I+ +++ + +  + 
Sbjct: 1   MIPADRLQQIRERFEYLEARMAEGGG--DIAALGREYAELKPVVDQIAEWNRLQADLTEA 58

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E++ LA+ E+ A+   + E E  +   LLP+D  D +  ILEIR GTGG
Sbjct: 59  EEMLA----DPEMKALAEEELPALRARLPEAEKALQLALLPRDAADARPAILEIRPGTGG 114

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RY+  R W+ EV+   D + GG KE+V  I G  VF+R+KFESGV
Sbjct: 115 EEAALFAGDLARMYQRYSEARGWRWEVIEEQDTELGGLKELVVRIEGENVFARLKFESGV 174

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA  +D+DI   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 175 HRVQRVPETESGGRIHTSAATVAVLPEAEAVDIDIASGDLRIDTMRSSGAGGQHVNTTDS 234

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM VLRARLYD+ER++  + R+++R+ Q+GSGDR
Sbjct: 235 AVRITHLPTGLVVTSSEKSQHRNREIAMNVLRARLYDMERQKADDARASDRRAQVGSGDR 294

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRI LTLY+LE +L G +D+I++ L    QA  +    
Sbjct: 295 SERIRTYNFPQGRMTDHRIGLTLYRLEAILSGDLDEIVDALTANAQAAQLAEMG 348


>gi|119361511|sp|Q2KZZ3|RF1_BORA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E++  +++      +D + +L+ E A + P++   + +   + 
Sbjct: 1   MKSSMLGRLEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E++ +A+ E+ A  + I  LE E+  LLLP+D +D +S  LEIR
Sbjct: 61  DLATAQEMLA----DPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  + W+VE++S S ++ GGYKE++A I G G + R+K
Sbjct: 117 AGTGGDESALFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA E++  +    D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ RAM+VL ARL D E +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +L+G ++++   LL  HQA+ + + 
Sbjct: 297 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLQQILEGDLNELTGALLAEHQAEQLAAL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|126736399|ref|ZP_01752141.1| peptide chain release factor 1 [Roseobacter sp. CCS2]
 gi|126714220|gb|EBA11089.1| peptide chain release factor 1 [Roseobacter sp. CCS2]
          Length = 351

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 184/354 (51%), Positives = 255/354 (72%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            ++  +I  L +RF  +E +M++  + +    L +EYA + P++  ++ Y    Q+  + 
Sbjct: 1   MIAADRIEQLIDRFQFLEAKMADGSAGNEIAALGKEYADLRPVVETVTAYKDLVQQIDEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+++LA+ E+  ++  +   E+++   LLPKD  D +  +LEIR GTGG
Sbjct: 61  EAMLA----DPEMKELAEAELPDLKAALAASEHDVQLALLPKDAADARPALLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA LF  DL RMY+RYA  + W+ E+L  S ++ GG KE+VA I G GVF++MK+ESGV
Sbjct: 117 DEAGLFAADLLRMYQRYAEGQGWRFEILEESLSELGGVKEVVARIVGDGVFAKMKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D++I   D+RIDTMRASGSGGQHVNTTDS
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAEDVDIEINANDLRIDTMRASGSGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRI HIPTG++V SSEKSQH+NR  AM+VL+ RL+D+ER+++ +ERSA+RK Q+GSGDR
Sbjct: 237 AVRILHIPTGMIVVSSEKSQHRNREIAMQVLKTRLFDLERQKVDDERSADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY L  V+QG +++I+N L    QA ++    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYSLNQVMQGDLEEIVNALQADAQATLLAEMG 350


>gi|254805442|ref|YP_003083663.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
 gi|254668984|emb|CBA07320.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
          Length = 358

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|293398675|ref|ZP_06642853.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
 gi|291611146|gb|EFF40243.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
          Length = 358

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++ +  + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|254674224|emb|CBA10008.1| peptide chain release factor 1 [Neisseria meningitidis alpha275]
          Length = 358

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKDTDDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDTDDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|291278533|ref|YP_003495368.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
           SSM1]
 gi|290753235|dbj|BAI79612.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
           SSM1]
          Length = 355

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 251/353 (71%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ ++  ++  +  ++S+   +     Y ++ +E+A + PI+ K   Y +  ++ ++   
Sbjct: 4   KLEEVLEKYNILTEKLSDPNIMSDNKTYQQIAKEHAELKPIVEKYQEYKKINEDIEEAKQ 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++   + D E+++LA++E+   ++++ ++ENE+  LL+PKD  D+K+  LEIRAGTGG E
Sbjct: 64  IL--ESGDKELKELAEMELEEGKEKLEKIENELKLLLVPKDPYDEKNIYLEIRAGTGGDE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF  DL RMY RYA   +WK E++  +D   GGYKE+V  I G+G +SR+KFE G HR
Sbjct: 122 ATLFAADLLRMYMRYAEKHRWKTEIVDYNDTGVGGYKEVVLLIKGKGAYSRLKFEGGGHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GR+HTSA TVAVLPEA +++V+I   D+RID  RASG+GGQHVNTTDSAV
Sbjct: 182 VQRIPVTESGGRIHTSACTVAVLPEADDVEVEIDPSDLRIDVFRASGAGGQHVNTTDSAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQ +N+ +AMK+L+A++ ++E ++     ++NRKLQ+GSGDRS
Sbjct: 242 RITHIPTGIVVSCQDERSQIKNKEKAMKLLKAKILEMEIRKQQEAIASNRKLQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q R+TDHRINLTLY L+ V++G +D+II+ L+   QA+ +    
Sbjct: 302 ERIRTYNFPQNRVTDHRINLTLYNLDQVMEGELDEIIDALIAYDQAEKLKEIG 354


>gi|308389808|gb|ADO32128.1| peptide chain release factor I [Neisseria meningitidis alpha710]
 gi|325130724|gb|EGC53462.1| peptide chain release factor 1 [Neisseria meningitidis OX99.30304]
 gi|325136665|gb|EGC59265.1| peptide chain release factor 1 [Neisseria meningitidis M0579]
 gi|325201657|gb|ADY97111.1| peptide chain release factor 1 [Neisseria meningitidis M01-240149]
 gi|325208608|gb|ADZ04060.1| peptide chain release factor 1 [Neisseria meningitidis NZ-05/33]
          Length = 358

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|114704325|ref|ZP_01437233.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
 gi|114539110|gb|EAU42230.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
          Length = 359

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 209/356 (58%), Positives = 275/356 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L    + ++  RF  +E+ M++ P  + Y KL  EYA++  +++ I  +   + E  
Sbjct: 1   MANLPTAALDEILARFTRLEMDMAKGPDHEVYSKLAAEYASLEEVVAAIREFRALETELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  +++ D  SD E+R+LA +EV  +      L   I  LLLPKD+ D+K  ILEIRAGT
Sbjct: 61  DAESLLDDPESDREMRNLAGVEVDDLRSRREGLRGRIQILLLPKDSADEKGAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEA LF GDL+RMY+RYA L +WKVE+LS+S+ + GG+KE++A I G GVFSR+KFES
Sbjct: 121 GGSEAGLFAGDLYRMYQRYAELNRWKVELLSASEGEVGGFKEVIAAIKGNGVFSRLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSAATVAVLPEA +ID+D+  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETESGGRIHTSAATVAVLPEAEDIDIDVRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGI+VTSSEKSQHQNR +AM+VL+A+LYD+ER++  +ERSA RK Q+GSG
Sbjct: 241 DSAVRITHLPTGIVVTSSEKSQHQNRAQAMQVLKAKLYDMERQKYDDERSAARKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G ++++++ L+  HQAK++ +  
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDKVIEGEMEELVDALVADHQAKLLAAVG 356


>gi|292669720|ref|ZP_06603146.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541]
 gi|292648517|gb|EFF66489.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541]
          Length = 354

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 173/358 (48%), Positives = 251/358 (70%), Gaps = 8/358 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  + +++ E+E  +S+      ++ + + T E+AA++PI+   S Y Q     
Sbjct: 1   MLS--KLNAVADKYRELEALLSDPAVMADMEKWQRYTREHAALTPIVEAYSAYQQALLTI 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++   ++ +   D+E++ + + E+   E+   +L  E+  LLLP+D +DDK+ I+EIR G
Sbjct: 59  EEDQGLLAEA--DAEMKAMLEEEIAEAEERRDQLAQELPILLLPRDPNDDKNVIVEIRGG 116

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF   LFRMY RYA  + W+ E+LSS+  + GG+KEI   ++G G +SR+K+E
Sbjct: 117 VGGEEAALFAASLFRMYARYAERQGWRTEILSSNPTEIGGFKEISFLVNGAGAYSRLKYE 176

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQR+P TE+ GR+HTSA TVAVLPEA +++V I   D+RIDT  ASG+GGQ+VN 
Sbjct: 177 SGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEDVEVTIDPNDLRIDTYCASGAGGQYVNR 236

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T++A+RITHIP+GI+V    EKSQ +NR +AMKVLRARLYD  R+  A+  +A+R+ Q+G
Sbjct: 237 TETAIRITHIPSGIVVQCQDEKSQLKNREKAMKVLRARLYDRARQEQADAVAADRRSQVG 296

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHRI LTLYK++ VL G +D+I+  L+TA QA+ +   +
Sbjct: 297 SGDRSERIRTYNFPQGRVTDHRIGLTLYKIDAVLDGELDEILAGLITADQAERLKQVN 354


>gi|158321600|ref|YP_001514107.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
 gi|166977358|sp|A8MJX9|RF1_ALKOO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158141799|gb|ABW20111.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
          Length = 357

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 174/356 (48%), Positives = 250/356 (70%), Gaps = 4/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L+ ++ ++  ++SE   ++    + KL +E++ +  I+ K   Y + +Q   D
Sbjct: 1   MLDKLAFLEEKYEDLSEKISEPEIINDQPQWKKLVKEHSDLEEIVMKYREYKKTEQGLND 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D  +D E R++A++E+  +E++I  LE E+  LLLPKD +DDK  I+EIRAG G
Sbjct: 61  AKEILRDKTADEEFREMAKMEIAELEEKIEVLEGELKILLLPKDPNDDKDVIVEIRAGAG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  DLFRMY RYA    WKVE++S++D   GGYKE++  I G G +SR+K+ESG
Sbjct: 121 GDEAGLFAADLFRMYTRYAENVGWKVEMMSANDTGIGGYKEVIFMIKGHGAYSRLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P+TE+ GR+HTS  TVAVLPEA ++D ++ + DIR+D  R+SG+GGQ VNTTD
Sbjct: 181 VHRVQRIPSTESGGRIHTSTITVAVLPEADDVDFELDMNDIRVDVFRSSGNGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG +V    EKSQ +N+ +A+K+LRARL DV  +    E + +RK Q+G+G
Sbjct: 241 SAVRVTHIPTGTVVSCQDEKSQLKNKEKALKILRARLLDVLIQEQQAEIAQDRKSQVGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGRITDHRIN+TLY+L+  L G I ++I+ L+T  QA+ +   +
Sbjct: 301 DRSERIRTYNFPQGRITDHRINVTLYRLDSFLNGDIQEMIDALITTDQAEKLKEVN 356


>gi|326203238|ref|ZP_08193103.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
 gi|325986496|gb|EGD47327.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
          Length = 359

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 258/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++   ++R+ EI  ++S+   ++    Y K  +EY+ +  I+ K   Y +  +E ++  
Sbjct: 3   DKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVSKEIEEAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D + R++ Q E    ++++  ++ ++  L++PKD +DDK+ I+EIR G GG 
Sbjct: 63  ELL-DQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFR   +YA  ++WK E++ S+  + GG+KE+V +I G+G +SR+KFESGVH
Sbjct: 122 EAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+SGR+HTS  TVAVLPE  E+DVDI   D+RIDT RASG+GGQH+N TDSA
Sbjct: 182 RVQRVPSTESSGRIHTSTITVAVLPEVEEVDVDINPNDLRIDTYRASGAGGQHINKTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+P+GI+V    E+SQH+N+ RAMK+LR++LY++ +++  NE + +RK Q+G+GDR
Sbjct: 242 IRITHMPSGIVVSCQDERSQHKNKDRAMKILRSKLYEIAQEQQINEVAQDRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR+TDHRINLTLYKLE VL G +D++I+ L+T  Q++ +GS ++
Sbjct: 302 SERIRTYNYPQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQSEKLGSGAD 356


>gi|110635328|ref|YP_675536.1| peptide chain release factor 1 [Mesorhizobium sp. BNC1]
 gi|119361558|sp|Q11E04|RF1_MESSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110286312|gb|ABG64371.1| bacterial peptide chain release factor 1 (bRF-1) [Chelativorans sp.
           BNC1]
          Length = 359

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 221/356 (62%), Positives = 286/356 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L  +++  +  RF  IE +M+  PS DAY+KL  EY+ +  + + I    + + E +
Sbjct: 1   MAELPRERMDQVLKRFELIETQMAAGPSPDAYVKLASEYSELQEVANSIRALRKAEAELE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL T++ D + D EIR+LA+I+   +E  + +++ ++  LLLPKD  D+K+ ILEIRAGT
Sbjct: 61  DLDTMLADKSIDREIRELAEIDREEVESRVEDMQQKLQVLLLPKDEADEKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYA+ R W+VEV+S+S+ + GGYKEI+A+++GRGVFSR+KFES
Sbjct: 121 GGDEAALFAGDLFRMYERYASERGWRVEVVSASEGEAGGYKEIIASVTGRGVFSRLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEA GR+HTSAATVAVLPEA +IDVDI  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPATEAQGRIHTSAATVAVLPEAEDIDVDIKPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGIMV S+EKSQHQNR RAM++LRARL+D+ER R ANERS  R+LQ+G+G
Sbjct: 241 DSAVRITHLPTGIMVVSAEKSQHQNRARAMQILRARLFDMERSRAANERSEARRLQVGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++I+ L+  HQ+K++ +  
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGELDEVIDALIADHQSKLLAAEG 356


>gi|261363763|ref|ZP_05976646.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
 gi|288568341|gb|EFC89901.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
          Length = 358

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|325204648|gb|ADZ00102.1| peptide chain release factor 1 [Neisseria meningitidis M01-240355]
          Length = 358

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|309782949|ref|ZP_07677669.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
 gi|308918373|gb|EFP64050.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
          Length = 360

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  EI   ++      ++D Y KLT E+A + P++++ + + Q ++
Sbjct: 1   MKPSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +      D +++  A+ E+ A  + +  LE E+  LLLPKD +D ++  +EIR
Sbjct: 61  DIATAQELAA----DPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++A + G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVA++PEA    D+ I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N T+SAVRITH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK 
Sbjct: 237 INKTESAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G ID+++  L   HQA+ + + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDAIMDGDIDELVGALAAEHQAEQLAAL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|297618446|ref|YP_003703605.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146283|gb|ADI03040.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 355

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 174/356 (48%), Positives = 249/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L+ +F EI   +S+   +     + K  + +A +S ++     Y + +Q++ D
Sbjct: 1   MLEKLDKLEEKFEEITALLSQPEVIADQARFQKYAKAHAELSELVDTYREYKRVRQDKTD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D ++R++   E+  +  +  +LE  +  LLLPKD +D+K+ I+EIRAGTG
Sbjct: 61  ARAMLEEEEDD-DLRNMLVEEIRVLSDKEEKLEQRLKLLLLPKDPNDEKNVIMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY RYA  + WKV+++ +S +D GG+KEI+  + GRG +S++KFESG
Sbjct: 120 GEEAALFAADLFRMYSRYAEKQGWKVDIMDTSYSDLGGFKEIIFIVEGRGAYSKLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE+ GR+HTSAATVAVLPEA E++VDI   D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRIPVTESGGRIHTSAATVAVLPEAEEVEVDINPNDLRIDVFCSSGPGGQSVNTTQ 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+V    EKSQH+N+ +AM+VLR+RL +++R     E +  R+ Q+GSG
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQHKNKDKAMRVLRSRLLELKRAEHEAEIADARRSQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTL+KL+ VL+G +D+II  L+T  QA+ +    
Sbjct: 300 DRSERIRTYNFPQGRVTDHRINLTLHKLDVVLEGELDEIIEALITHDQAEKMRQVE 355


>gi|121635327|ref|YP_975572.1| peptide chain release factor 1 [Neisseria meningitidis FAM18]
 gi|166223577|sp|A1KV95|RF1_NEIMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120867033|emb|CAM10796.1| peptide chain release factor I [Neisseria meningitidis FAM18]
 gi|325132818|gb|EGC55498.1| peptide chain release factor 1 [Neisseria meningitidis M6190]
 gi|325138721|gb|EGC61273.1| peptide chain release factor 1 [Neisseria meningitidis ES14902]
 gi|325198784|gb|ADY94240.1| peptide chain release factor 1 [Neisseria meningitidis G2136]
          Length = 358

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|319410939|emb|CBY91334.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE
           2594]
          Length = 358

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|187476811|ref|YP_784835.1| peptide chain release factor 1 [Bordetella avium 197N]
 gi|115421397|emb|CAJ47902.1| peptide chain release factor 1 [Bordetella avium 197N]
          Length = 356

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 246/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L +R  E++  +++      +D + +L+ E A + P++   + +   + +      
Sbjct: 4   RLEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++ +A+ E+ A  + I  LE E+  LLLP+D +D +S  LEIRAGTGG E
Sbjct: 64  MLA----DPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTGGDE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +ALF GDL RMY RYA  + W+VE++S S ++ GGYKE++A I G G + R+KFESG HR
Sbjct: 120 SALFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATEA GR+HTSA TVAV+PEA E++  +    D+RIDT RASG+GGQH+N TDSA
Sbjct: 180 VQRVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSA 239

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG++V    ++SQH+N+ RAM+VL ARL D E +   ++ +A RK  +GSGDR
Sbjct: 240 VRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGSGDR 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR+TDHRINLTLYKL+ +L+G ++++   LL  HQA+ + +  E
Sbjct: 300 SERIRTYNYPQGRVTDHRINLTLYKLQQILEGDLNELTGALLAEHQAEQLAALGE 354


>gi|225075789|ref|ZP_03718988.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
           NRL30031/H210]
 gi|224952871|gb|EEG34080.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
           NRL30031/H210]
          Length = 358

 Score =  299 bits (765), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGRITDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRITDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|194099102|ref|YP_002002187.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
 gi|239999408|ref|ZP_04719332.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|240014585|ref|ZP_04721498.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI18]
 gi|240081334|ref|ZP_04725877.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|240113543|ref|ZP_04728033.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|240116107|ref|ZP_04730169.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|240121107|ref|ZP_04734069.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID24-1]
 gi|240123936|ref|ZP_04736892.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|240126136|ref|ZP_04739022.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|240128613|ref|ZP_04741274.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494127|ref|ZP_05107298.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
 gi|260440083|ref|ZP_05793899.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|268595228|ref|ZP_06129395.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|268597436|ref|ZP_06131603.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|268599608|ref|ZP_06133775.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|268601773|ref|ZP_06135940.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|268682561|ref|ZP_06149423.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|268684722|ref|ZP_06151584.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|268687001|ref|ZP_06153863.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|291043371|ref|ZP_06569094.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|238690206|sp|B4RN52|RF1_NEIG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193934392|gb|ACF30216.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
 gi|226513167|gb|EEH62512.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
 gi|268548617|gb|EEZ44035.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|268551224|gb|EEZ46243.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|268583739|gb|EEZ48415.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|268585904|gb|EEZ50580.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|268622845|gb|EEZ55245.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|268625006|gb|EEZ57406.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|268627285|gb|EEZ59685.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|291012977|gb|EFE04960.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|317164656|gb|ADV08197.1| peptide chain release factor 1 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 358

 Score =  299 bits (764), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+R DT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++ +  + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|304386835|ref|ZP_07369099.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
           13091]
 gi|304339089|gb|EFM05179.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
           13091]
          Length = 358

 Score =  299 bits (764), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|33595093|ref|NP_882736.1| peptide chain release factor 1 [Bordetella parapertussis 12822]
 gi|46576758|sp|Q7WCE3|RF1_BORPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33565170|emb|CAE35966.1| peptide chain release factor 1 [Bordetella parapertussis]
          Length = 360

 Score =  299 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 172/361 (47%), Positives = 243/361 (67%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E++  ++E      +D + KL+ E A + P++   + +   + 
Sbjct: 1   MKPSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    SD +++ +A+ E+      I E+E  +  LLLP+D DD +S  LEIR
Sbjct: 61  DVATAQEML----SDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  R W+VE++S S+++ GGYKE++  I G G + R+K
Sbjct: 117 AGTGGDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA  +    I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ +AM+VL ARL D E +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G +D++   LL  HQA+ + + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQAEQLAAL 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|238927406|ref|ZP_04659166.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
 gi|238884688|gb|EEQ48326.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
          Length = 354

 Score =  299 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 171/356 (48%), Positives = 245/356 (68%), Gaps = 8/356 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  + +++ E+E  +S+   +     + + T E+AA++PI+     Y +     
Sbjct: 1   MLS--KLAAVADKYRELETLLSDPSVMADMEAWQRYTREHAALTPIVEAYQAYRRALAII 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   ++ +   D+E++ +   E+ A E E   L  E+  LLLP+D +D+K+ I+EIR G
Sbjct: 59  DEDKEMLSEA--DAEMKAMLTEEIAAAEAERDRLAAELPILLLPRDPNDEKNVIVEIRGG 116

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF   LFRMY RYA  + W+ EVLSS+  + GG+KEI   +SG   +S++K+E
Sbjct: 117 VGGEEAALFAASLFRMYVRYAERQGWRTEVLSSNPTEIGGFKEITFLVSGTAAYSKLKYE 176

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQR+P TE+ GR+HTSA TVAVLPEA E++V I   D+RIDT  ASG+GGQ+VN 
Sbjct: 177 SGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEEVEVTIDPNDLRIDTYCASGAGGQYVNR 236

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T++A+RITHIPTGI+V    EKSQ +NR +AMKVLRARLYD  ++  A+  +A+R+ Q+G
Sbjct: 237 TETAIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQEQADAVAADRRSQVG 296

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SGDRSERIRTYNF QGR+TDHRI LTLYK++ V+ G +D+++  L+TA QA+ +  
Sbjct: 297 SGDRSERIRTYNFPQGRVTDHRIGLTLYKIDAVMDGELDELLAGLITADQAQRLKQ 352


>gi|241664381|ref|YP_002982741.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
 gi|240866408|gb|ACS64069.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
          Length = 360

 Score =  299 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  EI   ++      ++D Y KLT E+A + P++++ + + + ++
Sbjct: 1   MKPSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKRAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +      D +++   + E+ A  + +  LE E+  LLLPK+ +D ++  +EIR
Sbjct: 61  DIATAQELAA----DPDMKAFGEDELRAARERMESLEGELQRLLLPKNPNDHRNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++A + G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVA++PEA    D+ I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D+++  L   HQA+ + + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDAIMDGDLDELVGALAAEHQAEQLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|296134391|ref|YP_003641638.1| peptide chain release factor 1 [Thermincola sp. JR]
 gi|296032969|gb|ADG83737.1| peptide chain release factor 1 [Thermincola potens JR]
          Length = 355

 Score =  299 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 246/351 (70%), Gaps = 5/351 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ E+   +++   +     + +  + +AA++ I+S    Y    +   +   
Sbjct: 4   KLQSLEEKYEELSKLIADPEIIADQSQWQRHAKAHAALTEIVSTYREYKSVLKGIDEAKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   DSE R++ + E+  ++++  +L  ++  LLLPKD +D+K+ I+EIR G GG E
Sbjct: 64  LLKDQ-LDSEFREMVEQELAELKEKEEKLSVQLKILLLPKDPNDEKNVIMEIRGGAGGEE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  + WK E+LSS+  D GG+KEI+  I G+G +SR+KFESGVHR
Sbjct: 123 AALFAGDLFRMYSRYAEAKGWKTEILSSNPTDIGGFKEIIFLIEGQGAYSRLKFESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+SGR+HTS  TVAVLPEA E+DVDI   D+RID   +SG GGQ VNTT SAV
Sbjct: 183 VQRVPTTESSGRIHTSTVTVAVLPEAEEVDVDIDPNDLRIDVFCSSGPGGQSVNTTQSAV 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V    EKSQH+N+ +A++VLRARL D  ++   N+ ++ RK Q+G+GDRS
Sbjct: 243 RVTHIPTGIVVSCQDEKSQHKNKEKALRVLRARLLDKAQEEQRNQLASTRKSQVGTGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ERIRTYNF QGR+TDHRI LTL+KL+ VL+G +D+II  L+T  QA+ +  
Sbjct: 303 ERIRTYNFPQGRVTDHRIGLTLHKLDMVLEGDLDEIIEALITTDQAEKLKE 353


>gi|16125109|ref|NP_419673.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
 gi|13422113|gb|AAK22841.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
          Length = 385

 Score =  299 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 195/355 (54%), Positives = 265/355 (74%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++  + +RF E+E RM  +      +KL++E+A + P+   +    +   E  +L 
Sbjct: 32  LPQARLDQVLDRFREVEARMGAATDGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELD 91

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +     SD E+ ++ + E+ A+++++  +E E+  +L PKD D++ S ILE+RAGTGG 
Sbjct: 92  VMA----SDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGD 147

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY+RYA  + W+VE+ S S+ + GG+KEIVA+I+G GVF R+KFESGVH
Sbjct: 148 EAALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVH 207

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTSAATVAVLPEA +++++I   D+RIDT R+SG+GGQHVN TDSA
Sbjct: 208 RVQRVPATEAQGRIHTSAATVAVLPEAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSA 267

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++VTSSEKSQHQNR RAMK L+ARLYD++R+ + + RS  RK Q+GSGDRS
Sbjct: 268 VRITHLPTGVVVTSSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRS 327

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR+TDHRINLTLY L  +++G  +DD+INPL+   QA+ + S  E
Sbjct: 328 ERIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQAERLASLEE 382


>gi|218768706|ref|YP_002343218.1| peptide chain release factor 1 [Neisseria meningitidis Z2491]
 gi|20139350|sp|Q9JT75|RF1_NEIMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121052714|emb|CAM09057.1| peptide chain release factor I [Neisseria meningitidis Z2491]
          Length = 358

 Score =  299 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|33591871|ref|NP_879515.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
 gi|33599373|ref|NP_886933.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
 gi|46576754|sp|Q7W023|RF1_BORPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576762|sp|Q7WQE9|RF1_BORBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33566969|emb|CAE30882.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
 gi|33571515|emb|CAE40989.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
 gi|332381288|gb|AEE66135.1| peptide chain release factor 1 [Bordetella pertussis CS]
          Length = 360

 Score =  299 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 173/361 (47%), Positives = 244/361 (67%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E++  ++E      +D + KL+ E A + P++   + +   + 
Sbjct: 1   MKPSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    SD +++ +A+ E+      I E+E  +  LLLP+D DD +S  LEIR
Sbjct: 61  DVATAQEML----SDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  R W+VE++S S+++ GGYKE++A I G G + R+K
Sbjct: 117 AGTGGDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA  +    I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ +AM+VL ARL D E +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G +D++   LL  HQA+ + + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQAEQLAAL 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|262274708|ref|ZP_06052519.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
 gi|262221271|gb|EEY72585.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
          Length = 362

 Score =  299 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 252/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +I   S Y Q + 
Sbjct: 1   MKPSILAKLEALSERYEEVQHLLGDPSVISDQDRFRSLSKEYSQLEEVIKCFSAYKQAES 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  +   D E+R++AQ EV A +++I  L +E+  LLLPKD +D+++C LEIR
Sbjct: 61  DLEAAQEMANE--DDPEMREMAQEEVKAAKEDIERLTDELQVLLLPKDPNDERNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY R+A  + W+VEV++++  + GGYKE++A ++G G +  MK
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRFAESKGWRVEVINANHGEHGGYKEMIAKVNGDGAYGVMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL ARL   E ++ A E+++ R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARLIKAEEEKRAAEQASTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L+ V++G +D +I P++   QA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLDEVMEGDLDSLIQPIIHEFQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|254472406|ref|ZP_05085806.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
 gi|211958689|gb|EEA93889.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
          Length = 357

 Score =  299 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 198/356 (55%), Positives = 263/356 (73%), Gaps = 2/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L+ +++  L  RF  IE  M+  P+ D YIKL+ +YA + PI+  I    + + + +  
Sbjct: 1   MLAPEKLDTLLARFEGIEAEMASGPAPDVYIKLSRDYAELEPIVMSIRELRKAEGDLEGA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D +SD+E+++LAQ+E   +   + EL  ++   LLPKD  D    ILE+RAGTGG
Sbjct: 61  EALLSDPDSDAEMKELAQLERDELTGVVEELTQKVRIGLLPKDKADSHDVILEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+R+A    WKVEV+SSS+ D GG+KEIVA ++G+ VF ++KFESGV
Sbjct: 121 DEAALFAGDLFRMYQRFADNNGWKVEVMSSSEGDMGGFKEIVAAVTGQEVFGKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLP+A E+DVDI   D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESGGRIHTSAATVAVLPQAEEVDVDINPADLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH PTGI+V    E+SQH+N+ RAMK+LRA++YDVER+R ANER+  R++Q+GSGD
Sbjct: 241 AVRITHNPTGIVVAVQDERSQHKNKDRAMKLLRAKIYDVERERAANERTEARRVQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRI LTLYKL+ ++ G    ++I+ L   HQA ++ +  
Sbjct: 301 RSERIRTYNFPQGRVTDHRIGLTLYKLDQMMTGEATGEVIDALTMDHQANLLAAEG 356


>gi|32033818|ref|ZP_00134103.1| COG0216: Protein chain release factor A [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307249197|ref|ZP_07531194.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307260449|ref|ZP_07542144.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306858721|gb|EFM90780.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869852|gb|EFN01634.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 360

 Score =  298 bits (763), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + +   ++    +   ++EY+ +  +++  + + +   
Sbjct: 1   MKDSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++D+A  E+   + EI  LE  +  LLLPKD +D+ +  LEIR
Sbjct: 61  DIEEAQILL----DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RY   ++W++E +S+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|74318511|ref|YP_316251.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
           25259]
 gi|119361634|sp|Q3SG10|RF1_THIDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74058006|gb|AAZ98446.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
           25259]
          Length = 360

 Score =  298 bits (763), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 178/361 (49%), Positives = 249/361 (68%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++     R  E++  +++      +D+Y KLT E+A +SP++     Y Q + 
Sbjct: 1   MKATLADKLARADERLEELDALLAQPEVAADMDSYRKLTREHAELSPVVGLYRQYKQVEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +++    ++     D+++R+LA+ E+      I ELENE+   LLP+D +D+++  LEIR
Sbjct: 61  DQKTAQEMLA----DADMRELAEAELADGAARITELENELQTALLPRDPNDERNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF G+L RMY RYA  ++WKVE++S S  + GGYKE++  I G G +SR+K
Sbjct: 117 AGTGGDESALFAGNLLRMYTRYAERQRWKVEIVSESPGEVGGYKEVIVRIVGEGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PEAAE+ +VDI   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPEAAEVGEVDINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+NR +AM VL ARL D E +      ++ RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDDRSQHRNRAQAMSVLAARLKDREIQAQQASEASTRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGRITDHRINLTLYK++ V+ G + ++++ L   HQA  + + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRITDHRINLTLYKIDAVMDGDLGELLDALAAEHQAAQLATL 356

Query: 356 S 356
           S
Sbjct: 357 S 357


>gi|307244800|ref|ZP_07526899.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253754|ref|ZP_07535608.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258211|ref|ZP_07539954.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854245|gb|EFM86451.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863238|gb|EFM95178.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867671|gb|EFM99516.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 360

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + +   ++    +   ++EY+ +  +++  + + +   
Sbjct: 1   MKDSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++D+A  E+   + EI  LE  +  LLLPKD +D+ +  LEIR
Sbjct: 61  DIEEAQILL----DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RY   ++W++E +S+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|163743155|ref|ZP_02150537.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
 gi|161383572|gb|EDQ07959.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
          Length = 351

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 183/355 (51%), Positives = 252/355 (70%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E  M+E  +      L +EY+ + P+  +IS Y +   + ++ 
Sbjct: 1   MIPEDRLEQILQRFQYLEAAMAEGVAGADIAALAKEYSDLRPVAEQISAYRRLLSDLEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D ++ +LA+ E+  +   + E E+ +   LLP+D  D +  +LEIR GTGG
Sbjct: 61  EQMLA----DPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R W +E++     + GG KE+VA + G  VF+R+K+ESGV
Sbjct: 117 DEAALFAGDLLRMYQRYAEARGWGIEIIEEQTTELGGLKEVVAHVKGENVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPVTESGGRIHTSAATVAVLPEAEDVDLRIDPGDLRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTGI+V SSEKSQH+NR  AM+V+R RLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHIPTGIIVVSSEKSQHRNREIAMQVMRTRLYDLERQRIDSERSADRASQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR++DHRINLTLYKL+ ++QG +D+II+ L    QA+++    +
Sbjct: 297 SERIRTYNFPQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQARLLAEMGQ 351


>gi|59801687|ref|YP_208399.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA 1090]
 gi|240017030|ref|ZP_04723570.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA6140]
 gi|240118391|ref|ZP_04732453.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|268604103|ref|ZP_06138270.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|75432438|sp|Q5F750|RF1_NEIG1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59718582|gb|AAW89987.1| putative peptide chain release factor I [Neisseria gonorrhoeae FA
           1090]
 gi|268588234|gb|EEZ52910.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
          Length = 358

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+R DT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++ +  + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|56476056|ref|YP_157645.1| peptide chain release factor 1 [Aromatoleum aromaticum EbN1]
 gi|81598974|sp|Q5P7G7|RF1_AZOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56312099|emb|CAI06744.1| peptide chain release factor 1 (RF-1) [Aromatoleum aromaticum EbN1]
          Length = 359

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 173/361 (47%), Positives = 244/361 (67%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R AE++  +S       +D +  L  E A I P+++    Y Q + 
Sbjct: 1   MKQSIRDKLELLTHRLAELDRELSSGDAVRDMDGFRSLGRERAEIEPVVALYGAYRQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D+E+R+LA+ E+      ++ LE E+   LLP D  D+++  LE+R
Sbjct: 61  DCESARAMLA----DAEMRELAESELETGAVRLQALEAELQCALLPCDPSDERNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA+LF GDL RMY RYA  ++WKVE++SSS +D GGYKE++  I+G G +S++K
Sbjct: 117 AGTGGDEASLFAGDLLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILRIAGAGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQR+P TE  GR+HTSA TVAV+PEA E++  +I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRIPVTETQGRIHTSACTVAVMPEADEVEAVNINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+V    ++SQH+NR +AM VL AR+ D + +      +A RK 
Sbjct: 237 INKTDSAVRITHLPTGIVVECQDDRSQHRNRAQAMSVLAARIQDRQLREQQAREAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V+QG +D++++ L   HQA  + + 
Sbjct: 297 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDAVMQGDLDELVDALTREHQADQLAAL 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|190151400|ref|YP_001969925.1| peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303250479|ref|ZP_07336676.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303251821|ref|ZP_07337992.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307249121|ref|ZP_07531128.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251520|ref|ZP_07533427.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256019|ref|ZP_07537807.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307262579|ref|ZP_07544210.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|238692365|sp|B3GZJ0|RF1_ACTP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189916531|gb|ACE62783.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649251|gb|EFL79436.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302650467|gb|EFL80626.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306854409|gb|EFM86605.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860984|gb|EFM92990.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865441|gb|EFM97336.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306872077|gb|EFN03790.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 360

 Score =  298 bits (762), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 162/362 (44%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + +   ++    +   ++EY+ +  +++  + + +   
Sbjct: 1   MKDSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++++A  E+   + EI  LE  +  LLLPKD +D+ +  LEIR
Sbjct: 61  DIEEAQILL----DDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RY   ++W++E +S+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|163739713|ref|ZP_02147121.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107]
 gi|161386943|gb|EDQ11304.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107]
          Length = 351

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 182/355 (51%), Positives = 251/355 (70%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E  M+E  +      L +EY+ + P+  +I+ Y +   + ++ 
Sbjct: 1   MIPEDRLEQILQRFQYLEAAMAEGVAGADIAALAKEYSDLRPVAEQITAYRRLLCDLEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D ++ +LA+ E+  +   + E E+ +   LLP+D  D +  +LEIR GTGG
Sbjct: 61  EQMLA----DPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R W  E++     + GG KE+VA + G  VF+R+K+ESGV
Sbjct: 117 DEAALFAGDLLRMYQRYAEARGWGFEIIEEQTTELGGLKEVVAHVKGENVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPVTESGGRIHTSAATVAVLPEAEDVDLRIDPGDLRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTGI+V SSEKSQH+NR  AM+V+R RLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHIPTGIIVVSSEKSQHRNREIAMQVMRTRLYDLERQRIDSERSADRASQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR++DHRINLTLYKL+ ++QG +D+II+ L    QA+++    +
Sbjct: 297 SERIRTYNFPQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQARLLAEMGQ 351


>gi|84516322|ref|ZP_01003682.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
 gi|84510018|gb|EAQ06475.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
          Length = 351

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 185/354 (52%), Positives = 248/354 (70%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            ++  +I  + +RF  +E +MS++        L  EYA + P++  ++ Y     +  D 
Sbjct: 1   MIAADKIEQIIDRFRFLEAKMSDAAHGGDIAALGREYAELRPVVDTVTAYKDLLAQMIDT 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R LA+ E+  ++  +   E+ +   LLPKD  D +  +LEIR GTGG
Sbjct: 61  QALLK----DPEMRALAEDELPELKAALAASEHAVQLALLPKDAADARPALLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF GDL RMY+RYA    W+ E+L  S  + GG KE+VA ++G GVF+R+K+ESGV
Sbjct: 117 DEASLFAGDLLRMYQRYAENMGWRFEILEQSQTELGGIKEVVARVAGEGVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMRASGSGGQHVNTTDS
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQINPNDLRIDTMRASGSGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRI HIPTG++V S+EKSQH+NR  AM+VL+ RL+D+ER+R+  ERSA+RK Q+GSGDR
Sbjct: 237 AVRILHIPTGLIVVSAEKSQHRNREIAMQVLKTRLFDLERQRIDGERSADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY L  V+ G +D II+ L +  QA ++    
Sbjct: 297 SERIRTYNFPQGRLTDHRINLTLYSLGQVMAGDLDTIIDALQSEAQAALLAEMG 350


>gi|153008371|ref|YP_001369586.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
 gi|166223580|sp|A6WXQ3|RF1_OCHA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151560259|gb|ABS13757.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
          Length = 357

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 216/356 (60%), Positives = 279/356 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  + Y+KL  EY+ +  ++ KI      ++E  
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSETYVKLASEYSELQEVVGKIRELTDSRKEAV 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE E+  LLLPKD  D+K+ ILEIRAGT
Sbjct: 61  DLAAMRDDASTDAEMRALALEELPGVEKRIEGLEQEVQILLLPKDAADEKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++   ERS +R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKADTERSESRRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLTELG 356


>gi|295688344|ref|YP_003592037.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
 gi|295430247|gb|ADG09419.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
          Length = 356

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 197/355 (55%), Positives = 263/355 (74%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++  + +RF E+E RM  +      +KL++E+A + P+   +    +   E  +L 
Sbjct: 3   LPQARLDQVLDRFREVEARMGAATDGTEIVKLSKEHAELKPVAEAVERLAKLSAERAELD 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +      D E+ D+ + E+  +++++  LE ++  +L PKD D++ S ILE+RAGTGG 
Sbjct: 63  VMAA----DPEMADMVRDEMAELDEKLPVLERDLALMLAPKDKDENASAILEVRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY+RYA L  W+VE+ S S+ + GGYKEIVA+I+G GVF R+KFESGVH
Sbjct: 119 EAALFAGDLFRMYQRYAQLHGWRVEIDSISEGEMGGYKEIVASITGDGVFGRLKFESGVH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTSAATVAVLPEA ++++DI   D+RIDT R+SG+GGQHVN TDSA
Sbjct: 179 RVQRVPATEAQGRIHTSAATVAVLPEAEDVEIDIKESDLRIDTYRSSGAGGQHVNKTDSA 238

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++VTSSEKSQHQNR RAMK L+ARLYD++R+ + + RS  RK Q+GSGDRS
Sbjct: 239 VRITHLPTGVVVTSSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRS 298

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR+TDHRINLTLY L  +++G  +DD+INPL+   QA+ + S  E
Sbjct: 299 ERIRTYNFPQGRVTDHRINLTLYNLSRIMEGDALDDVINPLIAEDQAERLASLEE 353


>gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
          Length = 371

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   ++      ++D Y KL+ E+A +SP+  +   Y Q + 
Sbjct: 12  MKASISTKLDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQD 71

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+++ A  E+ A  + ++ LEN +  LLLPKD +DD++ +LEIR
Sbjct: 72  DLATAQALL----DDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIR 127

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL RMY RYA  R+W+VE++S S +D GGYKE++  I+G   FSR+K
Sbjct: 128 AGTGGEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLK 187

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E+ +V+I   D+R+DT RASG+GGQH
Sbjct: 188 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQH 247

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+PTGI+V    ++SQH+N+ +AMKVL AR+ D++ +    + +  R+ 
Sbjct: 248 VNKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEANTRRN 307

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D++I+ L   HQA  + + 
Sbjct: 308 LIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDMIMDGDLDELISALSAEHQADQLAAL 367

Query: 356 SE 357
            E
Sbjct: 368 GE 369


>gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
 gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
          Length = 364

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 255/362 (70%), Gaps = 5/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  RF E+   +S++  +   + + +L+ EYA I P++     +     
Sbjct: 1   MKPSIQSRLEQLVERFEEVSALLSDAGVIANQNKFRELSREYAEIEPVVQCFQAWQHSLV 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   +  D ++D+++R++A+ E+   ++   EL+ E+  L+LPKD +D K+  LE+R
Sbjct: 61  DINEARELSKDGDADADMREMAEEELHTAQQASEELDAELQGLMLPKDPNDGKNVFLEVR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY R+A  R+W+VE+LS+S+ + GGYKE++A ++G GV+  +K
Sbjct: 121 AGTGGDEAAIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARVAGSGVYGTLK 180

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GR+HTSA TVAV+PEA E + V+I   D+R+DT RASG+GGQH
Sbjct: 181 FESGVHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQH 240

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+G++V    E+SQH+NR +AM +L +RL ++E +R     +  RK 
Sbjct: 241 VNKTDSAIRITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERAHQSMAETRKS 300

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF Q R+TDHRINLTLYKL+ V+ G +D ++ PLL  HQA+++ + 
Sbjct: 301 LVGSGDRSERIRTYNFPQSRVTDHRINLTLYKLDEVIAGDLDSVVKPLLQEHQAELLAAL 360

Query: 356 SE 357
           ++
Sbjct: 361 AD 362


>gi|227823188|ref|YP_002827160.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
 gi|227342189|gb|ACP26407.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
          Length = 352

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 233/347 (67%), Positives = 287/347 (82%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +L+ RFAEIE RMS  PS D Y+KL  EY+ + P+++KI  Y++   E  D+  ++ D  
Sbjct: 3   ELERRFAEIEARMSAGPSADVYVKLASEYSELQPVVTKIRAYEKATAELADIEVLLSDRA 62

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D E+RDLA++E   +E+ I  LE EI  LLLPKD  D+KS ILEIRAGTGGSEAALF G
Sbjct: 63  TDKEMRDLAEMERPEVEERIEALEEEIQILLLPKDAADEKSAILEIRAGTGGSEAALFAG 122

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           DLFRMYERYAA + W+VEVLS+S+ + GGYKEI+AT+SGRGVFSR+KFESGVHRVQRVP 
Sbjct: 123 DLFRMYERYAAAKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQRVPE 182

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TEASGR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTTDSAVRITH+P
Sbjct: 183 TEASGRIHTSAATVAVLPEAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVRITHLP 242

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           TGI+VTSSEKSQHQNR +AM+VLR+RL+D+ER+R  +ERSA+RK Q+GSGDRSERIRTYN
Sbjct: 243 TGIVVTSSEKSQHQNRAKAMQVLRSRLFDMERQRADSERSADRKSQVGSGDRSERIRTYN 302

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           F QGR+TDHRINLTLYKL+ +++G ID++++ LL  HQA  +    E
Sbjct: 303 FPQGRLTDHRINLTLYKLDRMMEGEIDEVVDALLADHQASQLALLGE 349


>gi|300690281|ref|YP_003751276.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
 gi|299077341|emb|CBJ49966.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
          Length = 356

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 172/360 (47%), Positives = 247/360 (68%), Gaps = 11/360 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  L  R  EI   ++      ++D Y KLT E+A + P++++ + + Q + + 
Sbjct: 1   MLS--KLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDV 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                ++     D +++  A+ E+ A  + +  LE E+  LLLP++ +D ++  LEIRAG
Sbjct: 59  ATAQELLA----DPDMKAFAEDEIRAARERMTTLEAELQRLLLPRNPNDHRNIFLEIRAG 114

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++A + G G +SR+KFE
Sbjct: 115 AGGDESALFAGDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARLVGEGAYSRLKFE 174

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVN 238
           SG HRVQRVPATEA GR+HTSA TVAV+PEA    D+ I   D+RIDT RASG+GGQH+N
Sbjct: 175 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHIN 234

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVR+TH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK  I
Sbjct: 235 KTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLI 294

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GSGDRS+RIRTYNF QGRITDHRINLTLYK++ ++ G +D+++  L   HQA+ + +  E
Sbjct: 295 GSGDRSDRIRTYNFPQGRITDHRINLTLYKIDAIMDGDLDELLGALAAEHQAEQLAALGE 354


>gi|332290276|ref|YP_004421128.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
 gi|330433172|gb|AEC18231.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
          Length = 360

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   ++    +   ++EY+ +  ++   + + Q   
Sbjct: 1   MKASIISKLETLDERYEELQALLGDPSVINDQEKFRAYSKEYSQLEDVVKCFARWKQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q+   ++     D  ++++A+ E+    + I E E ++  LLLPKD +D+ +C LEIR
Sbjct: 61  DLQEAQILL----DDPSMKEMAEEEIAHCTQGIEESEQQLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+ EVLS+++++ GGYKEI+  ISG  V+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRTEVLSANESEQGGYKEIIVKISGENVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E    +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESALPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +RL   E +R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRLVQAEEERKAAEQADTRRS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLTLY+L+ ++ G IDD+I P++T +QA+ + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTLYRLDEIMNGKIDDLIQPIITEYQAEQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|163858862|ref|YP_001633160.1| peptide chain release factor 1 [Bordetella petrii DSM 12804]
 gi|229470349|sp|A9IER8|RF1_BORPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163262590|emb|CAP44893.1| peptide chain release factor 1 [Bordetella petrii]
          Length = 360

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E++  ++E      ++ + KL+ E A + P++   + + + + 
Sbjct: 1   MKSSMRSRLEQLSHRLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFARTED 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D +++ +A+ E+    + + +LE+E+  LLLP+D +D +S  LEIR
Sbjct: 61  DLATAQEMLA----DPDMKAMAEDEIKTGRERLEKLESELQVLLLPRDPNDGRSLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  R W+VE++S S ++ GGYKE++A I G G + R+K
Sbjct: 117 AGTGGDESALFSGDLLRMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA  +   +    D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ +AM+VL ARL D E +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQSKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ++++   L+  HQA+ + + 
Sbjct: 297 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQAEQLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|319781345|ref|YP_004140821.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167233|gb|ADV10771.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 359

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 222/356 (62%), Positives = 277/356 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  +  RF  +E +MS  P+ DAY+++  EYA I  +++K+      + E+ 
Sbjct: 1   MVNLPRDRMDQVVKRFEMLEAQMSAGPAPDAYVRMASEYAEIQDMVAKVRALRAAEHEQA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D  +D+E+R LA+ E+  +E  I  L+ +I  LLLP+D  DDK+ ILEIRAGT
Sbjct: 61  DLEAMLADRGTDAEMRALAEAELPGVEDRIEALQKDIQILLLPRDAADDKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA R W+ E  S+SD D GGYKEI+AT+SG+GVF+ +KFES
Sbjct: 121 GGDEAALFAGDLFRMYERYAAERGWRFETASASDGDAGGYKEIIATVSGKGVFAHLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEASGR+HTSAATVAVLPEA E+D+DI  EDIRIDTMRASGSGGQHVNTT
Sbjct: 181 GVHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIDIRAEDIRIDTMRASGSGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGIMV  +EKSQHQNR +AM++LRARLYD+ER +   ERS +RK Q+GSG
Sbjct: 241 DSAVRITHLPTGIMVVQAEKSQHQNRAKAMQILRARLYDLERGKADEERSESRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D+IIN L+  HQ+K++    
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGELDEIINALIADHQSKLLADIG 356


>gi|302390589|ref|YP_003826410.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
 gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
          Length = 364

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 169/357 (47%), Positives = 251/357 (70%), Gaps = 4/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ E+   +SE   +   + + KL +E+A++  I+S    Y +   E ++
Sbjct: 1   MLDKLDAIEERYEELTREISEPAVIARQEEWRKLAKEHASLEEIVSCYREYKKVVSEIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ + ++D E+ +  + E+  ++K  +EL+  +  LLLPKD +D+K  I+EIRAG G
Sbjct: 61  SRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIRAGAG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  + WKVE++SSS  + GG+KE++  + GRG +SR+K+ESG
Sbjct: 121 GEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TEA GR+HTS ATVAVLPEA E+DV+I   ++RID  R+SG GGQ VNTTD
Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLPEAEEVDVEINPNELRIDVFRSSGHGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+V    E+SQ +NR +AMK+LRA+L +++++    + + +R+ Q+G+G
Sbjct: 241 SAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKLLEMKQREQNEKIAQSRRSQVGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRI  T ++LE +L G +D++I  L+   QA+ +  A +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRIGFTTHQLENILDGELDELIERLIAEDQARRLAEADD 357


>gi|197104299|ref|YP_002129676.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
 gi|196477719|gb|ACG77247.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
          Length = 377

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 198/355 (55%), Positives = 268/355 (75%), Gaps = 3/355 (0%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++  + +RF EIE RM  +      ++L++E+A + P+   +   ++ + E+ +L 
Sbjct: 22  LPQARLDQVLDRFREIEARMGAASDGAEIVRLSKEHAELKPVADAVQALERARAEQPELE 81

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +    + D+E+  LA+ E+ A+++ + ELE E+  LL PKD D++ S ILE+RAGTGG 
Sbjct: 82  EMAA--SGDAEMAALARDELEALKERLPELEREVALLLAPKDKDENASAILEVRAGTGGD 139

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY+RYA  R W+VE+ S S+ D GGYKEI+A+I+G GVF R+KFESGVH
Sbjct: 140 EAALFAGDLFRMYQRYAQTRGWRVEIDSISEGDAGGYKEIIASITGEGVFGRLKFESGVH 199

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTSAATVAVLPE  ++++++  +DIRIDT R+SG+GGQHVN TDSA
Sbjct: 200 RVQRVPATEAQGRIHTSAATVAVLPEVEDVEIEVRDQDIRIDTYRSSGAGGQHVNKTDSA 259

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTGI+VTSSEKSQHQNR RAMKVL+ARLY+ +R+ + + R+ +RK Q+GSGDRS
Sbjct: 260 VRITHLPTGIVVTSSEKSQHQNRARAMKVLKARLYEQQREALDSARAESRKSQVGSGDRS 319

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR+TDHRINLTLY L  V++G  +DD+I PL+   QA  + +  +
Sbjct: 320 ERIRTYNFPQGRVTDHRINLTLYNLAKVMEGEALDDVIEPLIAEDQAARLAALED 374


>gi|49475009|ref|YP_033050.1| peptide chain release factor 1 [Bartonella henselae str. Houston-1]
 gi|61214620|sp|Q6G5T7|RF1_BARHE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49237814|emb|CAF27009.1| Peptide chain release factor 1 [Bartonella henselae str. Houston-1]
          Length = 359

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 225/355 (63%), Positives = 284/355 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  L+ RF  IE +M+++P+ + Y+KL  EYA + PI+S I   +    E  
Sbjct: 1   MVSLPQDRMRQLEKRFEIIESQMAKNPNAEIYVKLASEYAELQPIVSSIRALNALYGEIT 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL T+I D  +D E+R LAQ E+  + +++ +LE ++  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  DLETIISDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLLPKDVADEKSAIVEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYAA R WKVEV+S ++ + GGYKEI+ATISGRGVFS++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIATISGRGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE  GR+HTSAATVAVLPEA EID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+ER++  NERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIERQKAENERSASRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTLYKL+ VL+G +D++I+ L++ HQ  ++   
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVLEGDLDELIHALISDHQTALLMEM 355


>gi|220927713|ref|YP_002504622.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
 gi|254790874|sp|B8I562|RF1_CLOCE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219998041|gb|ACL74642.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
          Length = 359

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 257/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++   ++R+ EI  ++S+   ++    Y K  +E + +  I+ K   Y +  +E ++  
Sbjct: 3   DKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKECSDLEEIVQKYREYTKVTKEIEEAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D + R++ Q E    ++++  ++ ++  L++PKD +DDK+ I+EIR G GG 
Sbjct: 63  ELL-EQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFR   +YA  ++WK E+L S+  + GG+KE+V TI G+G +SR+KFESGVH
Sbjct: 122 EAALFAGVLFRAMAKYAEKKRWKYEILDSNPTELGGFKEVVFTIEGKGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+SGR+HTS  TVAVLPE  E+DVDI   D+RIDT RASG+GGQH+N TDSA
Sbjct: 182 RVQRVPSTESSGRIHTSTITVAVLPEVEEVDVDINPSDLRIDTYRASGAGGQHINKTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AMK+LR++LY++ +++  NE + +RK Q+G+GDR
Sbjct: 242 IRITHMPTGIVVSCQDERSQHKNKDKAMKILRSKLYEIAQEQQINEVAQDRKNQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR+TDHRINLTLYKLE VL G +D++I+ L+T  Q++ +GS S+
Sbjct: 302 SERIRTYNYPQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQSEKLGSGSD 356


>gi|261392089|emb|CAX49586.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013]
          Length = 358

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +S     +D Y KLT E+A ++P++     Y   + 
Sbjct: 1   MKPSILEKLQQLGDRLEEVTHLLGQSEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DLADAEEML----SDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G + +I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|90022891|ref|YP_528718.1| peptide chain release factor 1 [Saccharophagus degradans 2-40]
 gi|119361599|sp|Q21FM3|RF1_SACD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89952491|gb|ABD82506.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharophagus
           degradans 2-40]
          Length = 360

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 183/362 (50%), Positives = 248/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  RF E+   M +   +   D +  L  EYA + P+I   + Y+    
Sbjct: 1   MKASILEKLEHLAERFTEVGALMGDPDVISNQDKFRDLGREYAELEPVIKCYNEYNTVLG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   +I D  SD ++R + Q E+   E  +  LE E+  LLLPKD +D K+  LEIR
Sbjct: 61  NIAEAKVLISD--SDPDMRAMGQDELKENEAALEPLELELQKLLLPKDPNDGKNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE++S +  + GGYKEI+  + G+GV+S +K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAESKGWKVEIISENQGEHGGYKEIITRVVGQGVYSELK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PEA E+ +V+I   D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVMPEADEMAEVNINKADLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+THIPTG++V    E+SQH+NR +AM +L +RL   + ++ A E+++ RK 
Sbjct: 239 VNKTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSLLASRLSMAQEEKAAAEQASARKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V+QG + D+I PL+  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVMQGALGDVIQPLVNEYQADQLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|119897272|ref|YP_932485.1| peptide chain release factor 1 [Azoarcus sp. BH72]
 gi|166223529|sp|A1K443|RF1_AZOSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119669685|emb|CAL93598.1| peptide chain release factor [Azoarcus sp. BH72]
          Length = 361

 Score =  297 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE++  +S       ++A+  L+ E A + P+++    Y Q +Q
Sbjct: 1   MKQSIRDKLEHLAGRLAELDRELSSEDATRDMNAFRDLSRERAELEPVVALYGAYRQAEQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+++L + E+ A E  I  L+ ++   LLP+D +D+++  LEIR
Sbjct: 61  DCATARELL----DDPEMQELGRSELEAGEARIAALDGDLQRALLPRDPNDERNLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA  ++W+VE++SS+ +D GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERQRWRVEIVSSNPSDLGGYKEVIARIVGAGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQR+P TE  GR+HTSA TVAV+PEA E   V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRIPVTETQGRIHTSACTVAVMPEADELAAVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ +AM VL ARL D + +   +  +A R+ 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDDRSQHRNKAQAMAVLAARLNDAQLRARQSAEAATRRS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V+QG +D+++  L+  HQA+ + + 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDAVMQGELDELLAALVLEHQAEQLAAL 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|301156075|emb|CBW15546.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1]
          Length = 360

 Score =  297 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + ++  +   D +   ++EY+ +  ++   + ++Q   
Sbjct: 1   MKDSIIAKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   ++     D E++++A++E+   + EI ++E ++  LLLPKD +D+ +C LEIR
Sbjct: 61  NIAEAELML----DDPEMKEMAEMEIEESKVEIEDVEQQLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  +SG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLTLY+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTLYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|219856616|ref|YP_002473738.1| hypothetical protein CKR_3273 [Clostridium kluyveri NBRC 12016]
 gi|219570340|dbj|BAH08324.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 367

 Score =  297 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 170/357 (47%), Positives = 248/357 (69%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++  ++N++ E+ +++S+   +     + KL +E+A +  I+ K   Y +  Q+ +
Sbjct: 10  IMLERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLE 69

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++ +  +D ++R++ Q E+  +   I + E+E+  LLLPKD +DDK+  +EIR G 
Sbjct: 70  DNKEMLREE-TDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGA 128

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L RMY RYA ++ WKVE +S S  D GG+KEIV  + G+  +SR+K+ES
Sbjct: 129 GGEEAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYES 188

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+SGR+HTS ATVAVLPE  ++D+ +   DIRID  RASG GGQ VNTT
Sbjct: 189 GTHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIVVNQNDIRIDVFRASGHGGQCVNTT 248

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V    EKSQ +N+ +AMKVL++RLY+  ++      + +RK Q+G+
Sbjct: 249 DSAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERNASIAEDRKNQVGT 308

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRI +TLYKL+  L G ID+II+ L+T  QA+ + S  
Sbjct: 309 GDRSERIRTYNYPQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALITEDQAQKMKSIG 365


>gi|221135300|ref|ZP_03561603.1| peptide chain release factor 1 [Glaciecola sp. HTCC2999]
          Length = 361

 Score =  297 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 248/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  RF E++  + +   +   + +  L++EYA +  ++     Y   ++
Sbjct: 1   MKPSVVQKLETLVERFEEVQALLGDPDVIGDQNRFRSLSKEYAQLEDVVKSFRDYQGAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +    + ++ +   D+E+R++AQ E+ A +  I  LE  +  LLLP+D  DD +C LEIR
Sbjct: 61  DLASANEMMQE--DDAEMREMAQEEIKAAKASIETLEQALQILLLPRDPQDDSNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDL+RMY RYA  + W+V+++S+++ + GGYKE++A I G G +  MK
Sbjct: 119 AGAGGDEAAIFAGDLYRMYSRYAETKGWRVDLVSANEGEHGGYKEVIANIIGDGAYGVMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVL   A    +DI   D+R+DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVAVLAEVAESEAIDINPADLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIP+G++V    E+SQH+NR +AM VL++RL ++E+++   E ++ RK 
Sbjct: 239 VNKTDSAIRITHIPSGVVVECQDERSQHKNRAKAMSVLQSRLNNIEKEKRDAEEASTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V+ G +D ++ P+   HQA M+ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDDVVAGDVDALLEPIRQEHQADMLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|86138685|ref|ZP_01057258.1| peptide chain release factor 1 [Roseobacter sp. MED193]
 gi|85824745|gb|EAQ44947.1| peptide chain release factor 1 [Roseobacter sp. MED193]
          Length = 361

 Score =  297 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 195/355 (54%), Positives = 254/355 (71%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  +E  M+E  S      L  EY+ I P+  +I+ Y Q   + +D 
Sbjct: 11  MIPEERLEQILQRFQYLEAAMAEGASGAEIANLAREYSEIKPVAEQITAYRQLLTDLEDA 70

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD ++++LA  E+  ++  +   E  +   LLPKD  D +  +LEIR GTGG
Sbjct: 71  EAML----SDPDMKELAAEEIPELKAALPGAEEALQLALLPKDAADARPAMLEIRPGTGG 126

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R WK EV+     + GG KE+VA I G  VF+RMK+ESGV
Sbjct: 127 DEAALFAGDLLRMYQRYAEARGWKFEVIEEQATELGGIKEVVAHIKGENVFARMKYESGV 186

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+DV I   DIRIDTMRASG+GGQHVNTTDS
Sbjct: 187 HRVQRVPVTESGGRIHTSAATVAVLPEAQEVDVQIDPSDIRIDTMRASGAGGQHVNTTDS 246

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTG+MV S+EKSQH+NR  AM+VLRARLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 247 AVRITHIPTGVMVVSAEKSQHRNREIAMQVLRARLYDLERQRVDSERSADRASQVGSGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR++DHRINLTLYKL+ ++QG +D+II+ L   +QA+++    +
Sbjct: 307 SERIRTYNFPQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADNQARLLAEMGQ 361


>gi|322421625|ref|YP_004200848.1| peptide chain release factor 1 [Geobacter sp. M18]
 gi|320128012|gb|ADW15572.1| peptide chain release factor 1 [Geobacter sp. M18]
          Length = 359

 Score =  297 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 178/359 (49%), Positives = 259/359 (72%), Gaps = 6/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
                +I DL+ RF E+E  +S+   +     + KL++E++ ++ +I+    Y +   + 
Sbjct: 1   MSMFDRIADLETRFEELESLLSDPEVLANQGEFRKLSKEHSGLAELIAAYREYKKVLADI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   ++ +   D E+R++AQ E+ ++E+   +LE+EI  LLLPKD +DDK+ +LEIRAG
Sbjct: 61  GDNRELLKEP--DQEMREMAQAELESLEERREQLESEIKVLLLPKDPNDDKNVVLEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG E+ALF GDLFRMY R+A + +W+VEV+S+S+++ GG+KE++A + G GVF+++K+E
Sbjct: 119 TGGDESALFAGDLFRMYSRFAEVNRWRVEVISASESEKGGFKEVIALVEGAGVFAKLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TEA GR+HTSA TVAV+PEA ++D+DI   D++ID  R+SG+GGQHVNT
Sbjct: 179 SGTHRVQRVPETEAQGRIHTSACTVAVMPEAEDVDIDINPADLKIDVYRSSGAGGQHVNT 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIPTG +V    E+SQ +NR +AMKVL++R+ D        + +A+RK Q+G
Sbjct: 239 TDSAVRITHIPTGTVVACQEERSQIKNRAKAMKVLKSRILDNILMEQNAKLAADRKSQVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF QGR+TDHRI LTLY+L+ ++ G I +I + L   +Q + + + SE
Sbjct: 299 SGDRSERIRTYNFPQGRMTDHRIGLTLYRLDAIMAGDIGEIADSLRAHYQMEALQAQSE 357


>gi|90420193|ref|ZP_01228101.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335527|gb|EAS49277.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 359

 Score =  297 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 210/356 (58%), Positives = 279/356 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L    + ++ NRFA +E  MS+ P  + Y KL  EY+ +  +++ I  Y + +QE  
Sbjct: 1   MATLPKSSLDEILNRFALLEHEMSKGPEHEVYTKLAAEYSGLEEVVAAIRTYQKAEQELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++ +  +  ++R+LA+IE+  +++++  L  EI  LLLPKD  D+K  ILEIRAGT
Sbjct: 61  EARAILDEPAAGRDMRELAEIEIDELKEQLETLTAEIRILLLPKDAADEKGAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEA LF GDLFRMY+RYA + +WKVE++S+S+ + GGY+E++A I G GVFSR+KFES
Sbjct: 121 GGSEAGLFAGDLFRMYQRYAEMNRWKVEIISASEGEVGGYREVIAAIRGVGVFSRLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSAATVAVLPEA +IDV++  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETESGGRIHTSAATVAVLPEAEDIDVEVKTEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGI+VTSSEKSQHQNR RAM+VL+ARL+D+ER+R  +ERSA RK Q+GSG
Sbjct: 241 DSAVRITHLPTGIVVTSSEKSQHQNRARAMQVLKARLFDMERQRADDERSAARKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L+  HQA ++ +  
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGEMDELVDALIADHQAHLLAAVG 356


>gi|307719604|ref|YP_003875136.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
 gi|306533329|gb|ADN02863.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
          Length = 357

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 177/357 (49%), Positives = 254/357 (71%), Gaps = 5/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            +  ++I +L  RF E+E  +++    +    Y +L +E+A +S ++     Y + +   
Sbjct: 1   MIPERRIEELITRFKELEEALADPSIFNDQKRYRELAQEHAHLSQVVRTAEEYRRLEARL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++  TV+ +   D E++++A+ E+ A+E +I   E  +  LL+P D  D K+ ILEIRAG
Sbjct: 61  EEAKTVL-EEEDDHELKEMAREEIKALEDQILHTEQRLKLLLVPPDPLDGKNIILEIRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  DL+RMY RYA  + WK+E++ +S+ + GG++E+V  ISG+ V+  ++FE
Sbjct: 120 TGGEEAALFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQR+P TE+ GR+HTSA TVAVLPE  E +V+I  EDIR+D  R+SG GGQ VNT
Sbjct: 180 SGGHRVQRIPVTESGGRIHTSAVTVAVLPEPEETEVEIRPEDIRVDVFRSSGPGGQSVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    EKSQH+N+ +A+K+LRARLY++E++R  +ER+A R+ QIG
Sbjct: 240 TDSAVRITHLPTGLVVTCQDEKSQHKNKAKALKILRARLYEMEKQRQESERAAMRRSQIG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SGDRSERIRTYNF Q R+TDHRINLTLYKLE V+ G +D+II+ L  A Q + + + 
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRINLTLYKLEAVMDGDLDEIIDALRLAVQEEALSTM 356


>gi|313896150|ref|ZP_07829704.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312975575|gb|EFR41036.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 354

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 168/356 (47%), Positives = 251/356 (70%), Gaps = 8/356 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  + +++ E+E  +S+   +     + + T E+AA++PI++    Y + ++  
Sbjct: 1   MLS--KLTAVADKYRELEALLSDPAVMADMARWQRYTREHAALTPIVTAYEAYRKAEETV 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   ++ +   D+E+++L   E+ A E E   L  E+  LLLP+D +DDK+ I+EIR G
Sbjct: 59  AEDKEMLAEA--DAEMKELLLEEIAAAEAERERLAEELPILLLPRDPNDDKNVIVEIRGG 116

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF   LFRMY RYA  + W+ E+LSS++ + GG+KEI   ++G G +S++K+E
Sbjct: 117 VGGEEAALFAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYE 176

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQR+P TE+ GR+HTSA TVAVLPEA +++V I   D+RIDT  ASG+GGQ+VN 
Sbjct: 177 SGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEDVEVTIDPNDLRIDTYCASGAGGQYVNR 236

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T++A+RITH+PTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++  A+  +A+R+ Q+G
Sbjct: 237 TETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYDRAQQEQADAVAADRRSQVG 296

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SGDRSERIRTYNF QGR+TDHRI LTLYK++ VL G +++++  L+TA QA+ +  
Sbjct: 297 SGDRSERIRTYNFPQGRVTDHRIGLTLYKIDAVLDGELEELLAALITADQAERLKQ 352


>gi|313893571|ref|ZP_07827140.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441842|gb|EFR60265.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 360

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 172/357 (48%), Positives = 251/357 (70%), Gaps = 4/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++++F ++E R+S+   +   D + KLT +++ +S  +     Y +      
Sbjct: 1   MLVDKLQVIEDKFMDLEQRISDPEIIARQDEWRKLTRQHSQLSETVETFRTYKKVLAGLD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   VI D + D E R++AQ E+  ++ +  ELE ++  LLLPKD +DDK+ I+EIR G 
Sbjct: 61  EAMEVIEDKSLDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGA 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY +YA  + W+ E++ +++ + GG+KE+V ++ G  V+S+MKFES
Sbjct: 121 GGDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVEGENVYSKMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE  GRVHTS  TVAVLPE  ++D+++  +D++IDT RASG+GGQH+N T
Sbjct: 181 GVHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITH+PTGI+V    ++SQ +N+ +AM+VLRA+L D   +      +A+RK Q+G+
Sbjct: 241 ESAVRITHLPTGIVVACQDQRSQLKNKDKAMRVLRAKLQDQAEQEAQASMAADRKSQVGT 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRINLTLYKL+ VL G +D+II  L  A QA  +  A+
Sbjct: 301 GDRSERIRTYNYPQGRVTDHRINLTLYKLDAVLNGDLDEIIQALNAADQAAKMQEAN 357


>gi|254461785|ref|ZP_05075201.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2083]
 gi|206678374|gb|EDZ42861.1| peptide chain release factor 1 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 351

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 184/354 (51%), Positives = 247/354 (69%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E +M+          L  EY+ + P++ +++ Y Q   + +D 
Sbjct: 1   MVPMDRLMQITQRFEFLEAKMAGGADPGEIADLAREYSDMKPVVEQVAAYRQLLSDIEDA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+++LA+ E+ A++  + + E  +   LLPKD  D +  ++EIR GTGG
Sbjct: 61  EAML----DDPEMKELAEEELPALKAAMPKAEAALQLALLPKDEADARPAMIEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL RMY+RY+  R WK E++     + GG KE+   I G  VF+R+K+ESGV
Sbjct: 117 DEAALFAADLLRMYQRYSEARGWKFEIIEEQLTELGGIKEVTGHIKGENVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I   DIRIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPTTESGGRIHTSAATVAVLPEAQEVDLVIAANDIRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIPTGI+V S+EKSQH+NR  AM+VLR RLYD ER+R+  ERSA+RK Q+GSGDR
Sbjct: 237 AVRITHIPTGIIVVSAEKSQHRNREIAMQVLRTRLYDAERQRIDEERSADRKSQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR++DHRINLTLYKL+ V++G +D+II+ L    QA  +   +
Sbjct: 297 SERIRTYNFPQGRMSDHRINLTLYKLDQVMEGDLDEIIDALTADDQATKLAEMN 350


>gi|85705322|ref|ZP_01036421.1| peptide chain release factor 1 [Roseovarius sp. 217]
 gi|85670195|gb|EAQ25057.1| peptide chain release factor 1 [Roseovarius sp. 217]
          Length = 426

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 189/354 (53%), Positives = 250/354 (70%), Gaps = 6/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  IE +M +        +L  EY+ + P++ +I  Y Q   + +  
Sbjct: 79  MVPLDRLQQIAERFEFIEAQMMQGGG--DIARLGREYSELRPLVEEIRAYRQILADIEGA 136

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++G    D E+RDLA+ E+  +E  +  +E  +   LLP+D  + +  ILEIR GTGG
Sbjct: 137 RAMLG----DPEMRDLARDELEVLEARLPGMEAALQLALLPRDEANARPAILEIRPGTGG 192

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL RMY+RYA  R W  +V+    ++ GG +E+V  I G GVF+R+KFESGV
Sbjct: 193 EEAALFAADLMRMYQRYAEARGWVFDVIEEQQSELGGIRELVVHIKGEGVFARLKFESGV 252

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++DV I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 253 HRVQRVPETESGGRIHTSAATVAVLPEAEDVDVQINPNDLRIDTMRSSGAGGQHVNTTDS 312

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIP+GI+VTSSEKSQH+NR  AM+VL++RL+D+ER R+ +ERSANR  Q+GSGDR
Sbjct: 313 AVRITHIPSGIVVTSSEKSQHRNREIAMQVLKSRLFDMERSRVDSERSANRAAQVGSGDR 372

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLYKLE V+ G +D++I+ L    QA ++   S
Sbjct: 373 SERIRTYNFPQGRMTDHRINLTLYKLEQVMGGDLDEVIDALTADAQATLLAEMS 426


>gi|206558779|ref|YP_002229539.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
 gi|238693068|sp|B4E6U6|RF1_BURCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|198034816|emb|CAR50684.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
          Length = 360

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 183/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D  +RD A+ E+ +  + +  LE E+  +LLPKD +DD++  LEIR
Sbjct: 61  DEAAAQELLA----DPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L+T HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIGALVTEHQAELLASL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|121534882|ref|ZP_01666701.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
 gi|121306481|gb|EAX47404.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
          Length = 356

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 171/357 (47%), Positives = 248/357 (69%), Gaps = 6/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++++ E+E  +S+   +     + K  + +A ++ I++K   Y +  Q   D
Sbjct: 1   MLDKLQAIEDKYLELENLISDPDIIANQSEWQKHAKAHAKLTEIVTKFREYKKVLQGMDD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D + R++ + E+  ++ +   LE E+  L+LPKD +D+K+ I+EIRAG G
Sbjct: 61  AREMLKEKLDD-DFREMVEAELAELKAKCVRLEEELRILMLPKDPNDEKNVIIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  + W+VE+L ++ +D GG+KE+V +I G G +SR K+ESG
Sbjct: 120 GDEAALFAGDLFRMYTRYAEAQGWRVELLDANSSDLGGFKEVVFSIQGDGAYSRFKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTT 240
           VHRVQRVP TEASGR+HTS  TVAVLPEA ++D   I   D+RIDT  ASG+GGQHVN T
Sbjct: 180 VHRVQRVPETEASGRIHTSTVTVAVLPEADDVDDVVINPSDLRIDTYCASGAGGQHVNKT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITH+PTGI+V    EKSQ +NR +AM+VLRA+L +  ++    + +  RK Q+G+
Sbjct: 240 ESAVRITHLPTGIVVQCQDEKSQIKNREKAMRVLRAKLLEAAQEEQRAQLAQTRKSQVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRI LTL+KL+++L G +D++IN L+TA QA+ +    
Sbjct: 300 GDRSERIRTYNFPQGRVTDHRIGLTLHKLDFILNGDLDELINALVTADQAERLKQVG 356


>gi|294787740|ref|ZP_06752984.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
 gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
          Length = 358

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +R  E+   +       ++D Y KL +E+A ++PI+     Y Q + 
Sbjct: 1   MKPSLLDKLQNLAHRLEEVTALLGSPEATANMDNYRKLNQEHAELTPIVETYQQYRQAES 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+   + +I +L+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAQEML----SDPEMKDFAAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY R+A   +W+ E++S+S++D GGYKE++  + G G +S++K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PEA E  ++ +   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPTTESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMEEITSALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|315186593|gb|EFU20352.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           thermophila DSM 6578]
          Length = 357

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 178/357 (49%), Positives = 254/357 (71%), Gaps = 5/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            +  ++I +L  RF E+E  +++    +    Y +L +E+A +S ++     Y + +   
Sbjct: 1   MIPERRIEELTTRFKELETALADPSVFNDQKRYRELAQEHAHLSQVVRTAEHYRRLEARL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++  TV+ +   D E++++A+ E+ A+E EI   E  +  LL+P D  D K+ ILEIRAG
Sbjct: 61  EEAKTVL-EEEDDHELKEMAREEIKALEGEIARTEQRLKLLLVPPDPLDGKNIILEIRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  DL+RMY RYA  + WK+E++ +S+ + GG++E+V  ISG+ V+  ++FE
Sbjct: 120 TGGEEAALFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQR+P TE+ GR+HTSA TVAVLPE  E +V+I  EDIR+D  R+SG GGQ VNT
Sbjct: 180 SGGHRVQRIPVTESGGRIHTSAVTVAVLPEPEETEVEIRPEDIRVDVFRSSGPGGQSVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    EKSQH+N+ +A+K+LRARLY++E++R  +ER+A R+ QIG
Sbjct: 240 TDSAVRITHLPTGLVVSCQDEKSQHKNKAKALKILRARLYEMEKQRQESERAAMRRSQIG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SGDRSERIRTYNF Q R+TDHRINLTLYKLE V+ G +D+II+ L  A Q + + + 
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRINLTLYKLEAVMDGDLDEIIDALRLAVQEEALSTM 356


>gi|319408172|emb|CBI81825.1| peptide chain release factor 1 [Bartonella schoenbuchensis R1]
          Length = 359

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 224/357 (62%), Positives = 282/357 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   +I  ++ RF  IE +M+ SP+ + YIKL  EYA +  I++ I   +   +E +
Sbjct: 1   MVSLPQNRIKQIEKRFEIIESQMAGSPNAETYIKLASEYAELQLIVTPIRTLNALYKEIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +I D  +D E+R+LAQ E+  + ++I +LE E+  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  ELKNIISDKQTDVEMRNLAQEELSLLCQKIEQLERELQILLLPKDIADEKSAIIEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYA    WKVE++S SD D GGYKEIVAT+SG+GVFS++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERYANTHNWKVEIISLSDGDVGGYKEIVATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TEA GR+HTSAATVAVLPEA EID+ I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRIPETEAGGRIHTSAATVAVLPEAEEIDIAIHPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+ER++  NERS +RK QIGSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRTRALQILRARLFDIERQKAENERSESRKTQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++I+ L++ HQ  ++    +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELIHALISNHQTGLLTEMDD 357


>gi|325578168|ref|ZP_08148303.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159904|gb|EGC72033.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 360

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + ++  +   D +   ++EY+ +  ++   + ++Q   
Sbjct: 1   MKDSIIAKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   ++     D E++++A++E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 61  NIAEAELML----DDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  +SG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLTLY+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTLYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|293392123|ref|ZP_06636457.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952657|gb|EFE02776.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 360

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 257/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + ++  +   D +   ++EYA +  ++   + ++Q   
Sbjct: 1   MKPSIINKLDSLKERYEELEALLGDAAVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + E+ ++E  +  LLLPKD +D+ +C LEIR
Sbjct: 61  NLEEAQLLL----DDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W VEVLS ++++ GG+KEI+A +SG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAETKRWHVEVLSENESEQGGFKEIIALVSGDGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG++V    E+SQH+N+ +A+ VL +RL   E++++A E++  R+ 
Sbjct: 237 INKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G IDD+I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|83747499|ref|ZP_00944537.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
           solanacearum UW551]
 gi|83725813|gb|EAP72953.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
           solanacearum UW551]
          Length = 374

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  EI   ++      ++D Y KLT E+A + P++++ +++ Q + 
Sbjct: 15  MKPSMLSKLDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAEN 74

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D +++  A+ E+      +  LE E+  LLLPKD +D ++  LEIR
Sbjct: 75  DVATAQELLA----DPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIR 130

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++A + G G +SR+K
Sbjct: 131 AGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLK 190

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA    D+ I   D+RIDT RASG+GGQH
Sbjct: 191 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQH 250

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK 
Sbjct: 251 INKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKS 310

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D+++  L   HQA+ + + 
Sbjct: 311 LIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQAEQLAAL 370

Query: 356 SE 357
            E
Sbjct: 371 GE 372


>gi|153956299|ref|YP_001397064.1| peptide chain release factor 1 [Clostridium kluyveri DSM 555]
 gi|189039965|sp|A5N3J7|RF1_CLOK5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146349157|gb|EDK35693.1| PrfA [Clostridium kluyveri DSM 555]
          Length = 357

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 170/356 (47%), Positives = 247/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+ +++S+   +     + KL +E+A +  I+ K   Y +  Q+ +D
Sbjct: 1   MLERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D ++R++ Q E+  +   I + E+E+  LLLPKD +DDK+  +EIR G G
Sbjct: 61  NKEMLREE-TDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA ++ WKVE +S S  D GG+KEIV  + G+  +SR+K+ESG
Sbjct: 120 GEEAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+SGR+HTS ATVAVLPE  ++D+ +   DIRID  RASG GGQ VNTTD
Sbjct: 180 THRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIVVNQNDIRIDVFRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AMKVL++RLY+  ++      + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERNASIAEDRKNQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+TDHRI +TLYKL+  L G ID+II+ L+T  QA+ + S  
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALITEDQAQKMKSIG 355


>gi|126739408|ref|ZP_01755101.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
 gi|126719508|gb|EBA16217.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
          Length = 351

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 187/355 (52%), Positives = 255/355 (71%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  +E  M+E  S      L  EY+ I P+  +I  Y Q   + ++ 
Sbjct: 1   MIPEERLEQILQRFQYLEAAMAEGASGAEIADLAREYSEIKPVAEQICAYRQLLADLEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D ++++LA+ E+  ++  + + E+ +   LLPKD  D +  +LEIR GTGG
Sbjct: 61  EVMLA----DPDMKELAEEEIPTLKAALPDAEHALQLALLPKDAADTRPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF GDL RMY+RYA  R WK EV+     + GG KE+V  I G  VF+RMK+ESGV
Sbjct: 117 DEASLFAGDLLRMYQRYAEARGWKFEVIEEQATELGGIKEVVVHIKGENVFARMKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPVTESGGRIHTSAATVAVLPEAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM+VL+ RLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHLPTGLVVTSSEKSQHRNREIAMQVLKTRLYDLERQRIDSERSADRASQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR++DHRINLTLYKL+ ++QG +D+II+ L   HQA+++   S+
Sbjct: 297 SERIRTYNFPQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADHQARLLSEMSQ 351


>gi|163867491|ref|YP_001608690.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
 gi|189039959|sp|A9IMM3|RF1_BART1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161017137|emb|CAK00695.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
          Length = 358

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 223/355 (62%), Positives = 283/355 (79%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   +I  L+ RF  IE +M+ +P+ + Y+KL  EYA + P+I+ I   +    E  
Sbjct: 1   MVSLPQDRIKQLEKRFEIIESQMTTNPNAETYVKLASEYAELQPVIASIRALNALYGEIT 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L T+I D  +D E+R LAQ E+ ++ K++ +LE E+  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  ELETIINDKQTDIEMRHLAQEELPSLHKKVEQLEKELQILLLPKDVADEKSAIVEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYA    WKVEV+S S+ + GGYKEI+ATISG+GVFS++K+ES
Sbjct: 121 GGSEAALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE  GR+HTSAATVAVLPEA EID+DI  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIDIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+ER+++ +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIERQKVESERSASRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +L+G +D+II+ L++ HQ  ++   
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRILEGDLDEIIHALISDHQTALLMEM 355


>gi|107024140|ref|YP_622467.1| peptide chain release factor 1 [Burkholderia cenocepacia AU 1054]
 gi|116688534|ref|YP_834157.1| peptide chain release factor 1 [Burkholderia cenocepacia HI2424]
 gi|170731835|ref|YP_001763782.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
 gi|254246465|ref|ZP_04939786.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|119361514|sp|Q1BSB1|RF1_BURCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223531|sp|A0K437|RF1_BURCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688554|sp|B1JUS4|RF1_BURCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|105894329|gb|ABF77494.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia AU 1054]
 gi|116646623|gb|ABK07264.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia HI2424]
 gi|124871241|gb|EAY62957.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|169815077|gb|ACA89660.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
          Length = 360

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 183/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D  +RD A+ E+ +  + +  LE E+  +LLPKD +DD++  LEIR
Sbjct: 61  DETAAQELLA----DPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L+T HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIGALVTEHQAELLASL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|126728795|ref|ZP_01744610.1| peptide chain release factor 1 [Sagittula stellata E-37]
 gi|126710725|gb|EBA09776.1| peptide chain release factor 1 [Sagittula stellata E-37]
          Length = 349

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 183/353 (51%), Positives = 249/353 (70%), Gaps = 6/353 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +K R   +E +M+        + L  E+A +SP++ +I+ +++   + ++ 
Sbjct: 1   MIPSDRLHQIKARLEYVEAQMATGGG--DIVALGREFAELSPVVRQIAEWERLTSDIEEA 58

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R LA+ E+  +   +   E  +   LLPKD  D +  +LEIR GTGG
Sbjct: 59  EAMLA----DPEMRALAEEELPDLRAALPAAEKAVQLALLPKDAADARPAVLEIRPGTGG 114

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA    W+ +V+    ++ GG KE+V  + G GVF+R+KFESGV
Sbjct: 115 DEAALFAGDLARMYQRYAEAHGWRWDVIEEQMSELGGVKELVVRVVGEGVFARLKFESGV 174

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I   DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 175 HRVQRVPETESGGRIHTSAATVAVLPEAEEVDIAIAAADIRIDTMRSSGAGGQHVNTTDS 234

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VLR RL+D+ER +    RSA+RK Q+GSGDR
Sbjct: 235 AVRITHLPTGIVVTSSEKSQHRNREIAMQVLRTRLFDLERSKADAARSADRKAQVGSGDR 294

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF QGR+TDHRI LTLYKL+ ++ G +D+II+ L++ HQA ++   
Sbjct: 295 SERIRTYNFPQGRMTDHRIGLTLYKLDAIMGGDLDEIIDALISEHQAALLAEM 347


>gi|118588514|ref|ZP_01545923.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
 gi|118439220|gb|EAV45852.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
          Length = 357

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 201/353 (56%), Positives = 273/353 (77%), Gaps = 2/353 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L+  ++  L +RFAE+E  MS +P   AY+KL+ EYA + P++ KI    + +Q+    
Sbjct: 1   MLARHKLDTLLDRFAELEHMMSANPDPGAYVKLSREYAGLEPLVGKIRALIKAEQDLAGA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D +SD+E+R+LA++E   +E+ + EL  ++   LLPKD  D    ILE+RAGTGG
Sbjct: 61  KALLQDPSSDAEMRELAEMERDELEERVEELAQDVRIGLLPKDEADSNDAILEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYA L+ WKVE+LS+S+ + GGYKE++A++SG  VF+++KFESGV
Sbjct: 121 DEAALFAGDLFRMYQRYAELQGWKVEILSASEGEVGGYKEVIASVSGENVFAKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTSAATVAVLP+A ++D+D+   D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPATESGGRIHTSAATVAVLPQAEDVDIDVQESDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQH+N+ RAM++LRAR+YD ER+R A+ER+  R+LQ+GSGD
Sbjct: 241 AVRITHLPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERERAASERTEARRLQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIG 353
           RSERIRTYN+ QGR+TDHRI LTLYKLE +L G  + ++I PL+  HQA ++ 
Sbjct: 301 RSERIRTYNYPQGRVTDHRIGLTLYKLEQILSGEALGEVIEPLILDHQASLLA 353


>gi|320529373|ref|ZP_08030461.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
 gi|320138339|gb|EFW30233.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
          Length = 354

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 168/356 (47%), Positives = 251/356 (70%), Gaps = 8/356 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  + +++ E+E  +S+   +     + + T E+AA++PI++    Y + ++  
Sbjct: 1   MLS--KLTAVADKYRELEALLSDPTVMADMARWQRYTREHAALTPIVTAYEAYRKAEETV 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   ++ +   D+E+++L   E+ A E E   L  E+  LLLP+D +DDK+ I+EIR G
Sbjct: 59  AEDKEMLAEA--DAEMKELLLEEIAAAEAERERLAKELPILLLPRDPNDDKNVIVEIRGG 116

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF   LFRMY RYA  + W+ E+LSS++ + GG+KEI   ++G G +S++K+E
Sbjct: 117 VGGEEAALFAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYE 176

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQR+P TE+ GR+HTSA TVAVLPEA +++V I   D+RIDT  ASG+GGQ+VN 
Sbjct: 177 SGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEDVEVTIDPNDLRIDTYCASGAGGQYVNR 236

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T++A+RITH+PTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++  A+  +A+R+ Q+G
Sbjct: 237 TETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYDRAQQEQADAVAADRRSQVG 296

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SGDRSERIRTYNF QGR+TDHRI LTLYK++ VL G +++++  L+TA QA+ +  
Sbjct: 297 SGDRSERIRTYNFPQGRVTDHRIGLTLYKIDAVLDGELEELLAALITADQAERLKQ 352


>gi|239832947|ref|ZP_04681276.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
 gi|239825214|gb|EEQ96782.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
          Length = 357

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 216/357 (60%), Positives = 278/357 (77%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L  RF+ IE +M+ +P  + Y+KL  EY+ +  ++ KI      ++E  
Sbjct: 1   MTALPQDRMDQLLKRFSMIESQMANNPDSETYVKLASEYSELQEVVGKIRELTDARREAV 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D  +D+E+R LA  E+  +EK I  LE E+  LLLPKD  D+K+ ILEIRAGT
Sbjct: 61  DLAAMRDDAATDAEMRALALEELPEVEKRIGTLEQEVQILLLPKDAADEKNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 121 GGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++   ERS +R+ Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAETERSESRRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLTELGQ 357


>gi|319899228|ref|YP_004159321.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
 gi|319403192|emb|CBI76751.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
          Length = 357

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 221/356 (62%), Positives = 286/356 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  L+ RF  IE +M+E+P+ + Y+KL  EYA + PII  I   +   +E  
Sbjct: 1   MVSLPKDRMKQLEKRFETIESQMAENPNAETYVKLASEYAELQPIIVLIRALNSLCKEIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L T+I D  +D+E+R+LAQ E+ ++ +++++LE E+  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  ELETIISDTQTDTEMRNLAQEELSSLYQKVQQLEQELQILLLPKDIADEKSVIIEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF G+LFRMYERYA    WKVEV+S SD + GGYKEI+ATISG+GVFS++KFES
Sbjct: 121 GGSEAALFAGNLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATISGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE  GR+HTSAATVAVLPEA EID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+ER++  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKTQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ++++IN L++ HQ  ++    
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQTTLLIELE 356


>gi|225175858|ref|ZP_03729851.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
 gi|225168782|gb|EEG77583.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
          Length = 356

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 178/352 (50%), Positives = 253/352 (71%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++   + RF E+E  +S+   +   D + KLT+E++ +S +++    Y Q +Q+  +  
Sbjct: 3   DKLKATEERFDELEKLISDPEVIARQDEWRKLTKEHSRLSEVVNAYREYQQVEQDLAEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+    + E+ A  ++  EL  ++  LLLP+D +DDK+ I+E+RAGTGG 
Sbjct: 63  EMLRD-GGDEEMSRFLKDEITANTEKKEELTEKLRLLLLPRDPNDDKNVIVEVRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA  + WK EVL +++ D GG+KE+V  I G G +SR+KFESGVH
Sbjct: 122 EAALFAGDLFRMYTRYAERQGWKTEVLDANETDIGGFKEVVFAIEGDGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTSAATVAVLPEA +++VDI   D+RID   +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSAATVAVLPEAEDVEVDINQNDLRIDVFCSSGPGGQSVNTTQSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+P+GI+V    EKSQH+N+ +AM+VLRARL++  ++  A E++A RK Q+GSGDR
Sbjct: 242 VRITHLPSGIVVSCQDEKSQHKNKDKAMRVLRARLFEKAQEEAAAEQAAARKTQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYNF QGR++DHRI +TLYKL+  L G +D++++ L+T+ QA+++  
Sbjct: 302 SERIRTYNFPQGRVSDHRIGMTLYKLDQFLDGDLDEMVDALITSEQAELLKQ 353


>gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|119361504|sp|Q0VS77|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 361

 Score =  295 bits (755), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   +S+   +   + +  L+ EYA I P++     Y Q  +
Sbjct: 1   MKASLQGKLDKLADRFEELAGLLSDPDVISNQNQFRDLSREYAEIDPVVKCYRQYQQAVE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +    +SD+++R++   E    ++ +  L  E+  L+LPKD  D  +  LE+R
Sbjct: 61  DHGAAKAM--QDDSDADMREMGAEEARDAQERMEALAAELQKLMLPKDPRDGANVFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  R WKVE++S+S+ + GGYKE++A + G GV+SRMK
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVA++ EA ++    I  ED+RIDT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG++V    E+SQH+N+ RAM +L A+LYD ++     E++A RK 
Sbjct: 239 VNTTDSAVRITHLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY+L  +++G +D+I+  LL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYRLNEIVEGDLDEILGALLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|73542728|ref|YP_297248.1| peptide chain release factor 1 [Ralstonia eutropha JMP134]
 gi|119361585|sp|Q46WS9|RF1_RALEJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72120141|gb|AAZ62404.1| bacterial peptide chain release factor 1 (bRF-1) [Ralstonia
           eutropha JMP134]
          Length = 360

 Score =  295 bits (755), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   ++      ++D Y KL+ E+A +SP+  +   Y Q + 
Sbjct: 1   MKASMLAKLDQLAERLEEVNALLAREDATANIDQYRKLSREHAELSPVAEQYGFYRQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E++D A  E+ +  + +  LE  +  LLLPKD +DD++ ILEIR
Sbjct: 61  DLATAQALL----DDPEMKDFAADEIASARERLESLEGSLQKLLLPKDPNDDRNLILEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S++D GGYKE++  I+G   FSR+K
Sbjct: 117 AGTGGEESALFAGDLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA E+ DV+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+PTGI+V    ++SQH+N+ +AMKVL AR+ D + +    + ++ R+ 
Sbjct: 237 VNKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQMRAAQAKEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G ++++++ L   HQA  + + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDMIMDGDLEELVSALAAEHQADQLAAL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|254253376|ref|ZP_04946694.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
 gi|124895985|gb|EAY69865.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
          Length = 360

 Score =  295 bits (755), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNELLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D  +RD A+ E+ +    +  LE E+  +LLPKD +DD++  LEIR
Sbjct: 61  DETAAQELLA----DPSMRDFAEDEIRSARDRMARLELELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|322513486|ref|ZP_08066596.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
 gi|322120705|gb|EFX92589.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
          Length = 360

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + +   ++    +   ++EY+ +  +++  + + +   
Sbjct: 1   MKESIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++D+A  E+   + EI  LE  +  LLLPKD +D+ +  LEIR
Sbjct: 61  DIEEAQILL----DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RY   ++W++E +S+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIVQVEQERQAAEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGRITDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRITDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           S+
Sbjct: 357 SD 358


>gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619]
 gi|229470352|sp|B1JEP6|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619]
          Length = 360

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EY+ + P+I     + + + 
Sbjct: 1   MKASLLNKLDTLQDRFEELTALLGDAEVISDQARFRAYSREYSEVEPVIGAYKEWRKVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D   D ++R++A  EV   ++++  LE+++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKDA--DPDMREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W++E+LS ++ + GGYKEI+A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR RAM  L A+L D++     N  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|303228461|ref|ZP_07315294.1| peptide chain release factor 1 [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303230754|ref|ZP_07317501.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514514|gb|EFL56509.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
 gi|302516963|gb|EFL58872.1| peptide chain release factor 1 [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 360

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 175/357 (49%), Positives = 250/357 (70%), Gaps = 4/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++++F ++E R+S+   +   D + KLT ++A +S  +     Y +      
Sbjct: 1   MLVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVEAFREYKKVLAGID 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   VI D   D E R++AQ E+  ++ +  ELE ++  LLLPKD +DDK+ I+EIR G 
Sbjct: 61  EAMEVIEDKTMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGA 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY +YA  + W+ E++ +++ + GG+KE+V ++ G  V+S+MKFES
Sbjct: 121 GGDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVDGENVYSKMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE  GRVHTS  TVAVLPE  ++D++I  +D++IDT RASG+GGQH+N T
Sbjct: 181 GVHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEINDKDLKIDTYRASGAGGQHINKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITH+PTGI+V    ++SQ QNR +AM+VLRA+L D   +      +A+RK Q+G+
Sbjct: 241 ESAVRITHLPTGIVVACQDQRSQLQNREKAMRVLRAKLQDKAEQEATASMAADRKSQVGT 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRINLTLYKL+ +L G +D+II  L  A QA  +  A+
Sbjct: 301 GDRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQEAN 357


>gi|83951817|ref|ZP_00960549.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
 gi|83836823|gb|EAP76120.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
          Length = 349

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 191/353 (54%), Positives = 246/353 (69%), Gaps = 6/353 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L   ++  +  RF  IE +MS         +L  EYA + P++ +I  Y       +  
Sbjct: 1   MLPQDRLDQILQRFEFIEAQMSAGSG--DIAQLGREYAELRPVVEEIRAYRAALDAAEQA 58

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++G    D E+R+LA+ E+  ++ E+   E  +   LLPKD  D +  I+EIR GTGG
Sbjct: 59  EAMLG----DPEMRELAEDELRTLKAELPGREKALQLALLPKDEADARPAIIEIRPGTGG 114

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY RYA  R W+ EV+  +  + GG KE V  + G  VF+R+K+ESGV
Sbjct: 115 EEAALFAGDLLRMYARYAEARGWQFEVIEEAQTELGGIKEAVVHVKGAHVFARLKYESGV 174

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   DIRIDTMRASG+GGQHVNTTDS
Sbjct: 175 HRVQRVPETESGGRIHTSAATVAVLPEAEDVDIHIDPSDIRIDTMRASGAGGQHVNTTDS 234

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIP+GI+VTSSEKSQH+NR  AM+VL+ RLYD+ER+++ + RSA+R  Q+GSGDR
Sbjct: 235 AVRITHIPSGIVVTSSEKSQHRNREIAMQVLKTRLYDLERQKVHDARSADRAAQVGSGDR 294

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF QGR+TDHRINLTLYKL+ V+ G +DDII+ L T  QA ++   
Sbjct: 295 SERIRTYNFPQGRMTDHRINLTLYKLDQVMAGDLDDIIDALTTDAQAALLAEM 347


>gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
 gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
          Length = 358

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 185/358 (51%), Positives = 253/358 (70%), Gaps = 6/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
                ++ ++ +RF E+E  +S+       + + +LT E+A +S  +     Y Q +QE 
Sbjct: 1   MAIFDKLEEVVDRFQEVEGLLSDPTVLSDQNKFRELTREHAELSEPVEVYRRYRQIQQEI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   ++ D   D ++R++A+ E+ A+E E   L  ++  L+LPKD +D K+ ILEIRAG
Sbjct: 61  EDNRELMRD--DDPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNIILEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFR Y RYA   +WKVE++SSS++  GG+KE++A ISG  V+SR+K+E
Sbjct: 119 TGGDEAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENVYSRLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE  GR+HTSA TVAVLPEA E+D++I   D+RID  RASG+GGQHVN 
Sbjct: 179 SGTHRVQRVPETETQGRIHTSACTVAVLPEAEEVDLEINPSDLRIDLYRASGAGGQHVNK 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRITHIPTG++V    EKSQH+N+ RAMKVLR+R+ D        E +A+RK Q+G
Sbjct: 239 TESAVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRILDAMEAEKHAEMAADRKSQVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR TDHRI LTLYKL+ ++QG +D++ + L T +QA+++    
Sbjct: 299 SGDRSERIRTYNFPQGRCTDHRIGLTLYKLDAIMQGDLDEVFDALTTHYQAELMAGQE 356


>gi|167769908|ref|ZP_02441961.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
           17241]
 gi|167667899|gb|EDS12029.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
           17241]
          Length = 358

 Score =  295 bits (754), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 242/355 (68%), Gaps = 4/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +  R+ EI  R+ E       + Y  L +EY+ ++PI+ K   Y   K    +  
Sbjct: 3   DKLDSVAARYEEISRRLMEPDVTGDPEQYASLMKEYSRLTPIVEKYRAYRTAKDACDEAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V+ +   D E+R+LAQ ++      + +   E+  LLLP+D +DDK+ I+EIR G GG 
Sbjct: 63  EVLDESGVDREMRELAQEQLDENRAVLDQTAQELKILLLPRDPNDDKNVIVEIRGGAGGE 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G L+RMY  YA    W+ EV+S+++ + GGYKEI  +I+G G +SR+K+ESGVH
Sbjct: 123 EAALFAGVLYRMYTMYAEGLGWQCEVISANETELGGYKEICFSITGEGAYSRLKYESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTS  TVAVLPEA E++ ++   D++ID  R+SG+GGQHVN T SA
Sbjct: 183 RVQRVPETETQGRIHTSTVTVAVLPEAEEVEFELDPRDLQIDVFRSSGAGGQHVNKTSSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +R+TH+PTG++V    E+SQ++N+ RA+KVLRARL D++ +   ++ +  R+LQ+G+GDR
Sbjct: 243 IRVTHLPTGMVVECQDERSQYKNKDRALKVLRARLLDIKVREQNDKIATERRLQVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR+TDHRI LTLYKL+ VL G + ++ + L+T  QA+ + SA E
Sbjct: 303 SERIRTYNYPQGRVTDHRIGLTLYKLDSVLNGDLAELFDALMTFDQAEKLKSAEE 357


>gi|229542476|ref|ZP_04431536.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
 gi|229326896|gb|EEN92571.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
          Length = 356

 Score =  295 bits (754), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 246/354 (69%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ ++   +S+   V+   KL   ++E + +   +     Y + +++ QD  
Sbjct: 3   DRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDLQETVQVYREYKEVQKQLQDAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ +   D E++D+ + E+  +E +I E E  +  LLLPKD +D+K+ I+EIR   GG 
Sbjct: 63  SLLSEK-LDPEMKDMVKEEIHELESKIPEYEERLKILLLPKDPNDEKNVIVEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK++V+ ++    GGYKEIV  ++G+G +S++KFE+G H
Sbjct: 122 EAALFAGDLYRMYMRYAESQGWKIDVIEANVTGIGGYKEIVFMVNGKGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++VDI  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEAEEVEVDINEKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ VL G +D+II+ L+   Q+K + S +
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQVLDGKLDEIIDALILEDQSKKLESVN 355


>gi|312115445|ref|YP_004013041.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220574|gb|ADP71942.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 361

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 208/355 (58%), Positives = 273/355 (76%), Gaps = 1/355 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  +   ++  L  R+  I+ ++SE    + + KL++E++ + P+++ I   +  ++E  
Sbjct: 1   MASIPKDKLKRLVGRWETIQAQLSEGCDQETFKKLSKEFSDLDPLVAAIKTLEAAEEERD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            L  +I D  ++ ++ +LA+ E+ A E  + +LE+E+  +LLPKD  D+KS ILE+RAGT
Sbjct: 61  SLRQMIEDPAAEPDMAELAREELEAAEPRVEQLEHELQIMLLPKDAADEKSAILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLFRMY+RYA L+ WKV VLS SD D GG++EIVA+ISG+GVF+RMKFES
Sbjct: 121 GGEEAALFAADLFRMYQRYADLKGWKVNVLSVSDADAGGFREIVASISGKGVFARMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPEA E+DV+I  +DIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETENQGRIHTSAATVAVLPEAEEVDVEIREQDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGI+VTSSEKSQHQNR RAM+VLRARL+D+ER R+   R+A RK QIGSG
Sbjct: 241 DSAVRITHIPTGIIVTSSEKSQHQNRARAMQVLRARLFDMERTRIDEARAAERKDQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGS 354
           DRS+RIRTYNF QGR+TDHR+N+TLY L  +++G  +D II+ L+T  QA  + +
Sbjct: 301 DRSQRIRTYNFPQGRVTDHRVNVTLYNLPQIMEGEGLDTIIDALITERQAGQLAA 355


>gi|153007050|ref|YP_001381375.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
 gi|166223527|sp|A7HI45|RF1_ANADF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152030623|gb|ABS28391.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
          Length = 372

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 162/361 (44%), Positives = 235/361 (65%), Gaps = 9/361 (2%)

Query: 3   FLSHK---QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKK 56
            LS +   ++  ++ RF E+   +S+       D + K+++E A++ P +  +  Y +  
Sbjct: 1   MLSQEVLKKLEAIEQRFEELTALLSDPSVASNGDRFRKVSKERASLEPTVEALRAYRKLV 60

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
            +  D   ++ +   D ++R++A+ E+  +  ++   E ++   L+PKD  D+K  ILEI
Sbjct: 61  TDIGDNEALLEEK--DPDLREMAKEELAQLRPQVDPAEEQLKLYLVPKDPADEKDVILEI 118

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           RAG GG EA LF  +L RMY RYA  R W+ EV  +S  + GG K++   I+G  V+S +
Sbjct: 119 RAGAGGDEAGLFAAELLRMYLRYAERRGWRTEVADTSAGNLGGVKDVTVNIAGDSVYSWL 178

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           KFESGVHRVQRVPATEA GR+HTS  TVAV+PEA +ID+ +   DI +D  R++GSGGQ 
Sbjct: 179 KFESGVHRVQRVPATEAQGRIHTSTVTVAVMPEAEDIDIQVSPADIEMDVFRSTGSGGQS 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVR+TH PTGI+V    EKSQ +NR  AM++LRA+LY++E +R  + R A RK 
Sbjct: 239 VNTTDSAVRLTHKPTGIIVKCQQEKSQLKNRNMAMRMLRAKLYEIELERQRSARDAARKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+G+GDRSE+IRTYNF Q R+TDHRIN T + L  V+ G + D+I+   T + A+ +  A
Sbjct: 299 QVGTGDRSEKIRTYNFPQDRLTDHRINYTRHNLPAVMDGDVQDVIDACRTFYAAQALREA 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|241760302|ref|ZP_04758397.1| peptide chain release factor 1 [Neisseria flavescens SK114]
 gi|241319180|gb|EER55658.1| peptide chain release factor 1 [Neisseria flavescens SK114]
          Length = 358

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   + +      +D Y KLT E+A I+P++     Y Q + 
Sbjct: 1   MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAEITPVVETFHQYMQAQN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++    SD E++D A  E+ A + +I EL+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DMAEAQEML----SDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATENQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|192360464|ref|YP_001981172.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
 gi|238692456|sp|B3PJP4|RF1_CELJU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190686629|gb|ACE84307.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
          Length = 360

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 252/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  LK R+ E+   +SE+  ++    +  L++EYA + P++     Y Q   
Sbjct: 1   MKSSILEKLERLKERYEEVSALLSEADVINNQARFRDLSKEYAELEPVVVAYKGYLQLLA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   +I +   D+++R++A+ E+   E  +   E E+  LLLPKD +D+K+C LE+R
Sbjct: 61  DIEEAKHLIAE--GDADMREMAEEELEGCEARLEPTELELQKLLLPKDPNDEKNCYLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VE+LS S+ + GG+KEI++ +SG GV+S++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAETQGWRVEILSQSEGEHGGFKEIISLVSGSGVYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PEA E  +V+I   D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVMPEADELEEVNINKADLRIDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    E+SQH+NR RAM +L  +L  ++ +      S  R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDERSQHKNRARAMSLLATKLKTMQEEAAHKSISEERRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY L+ V+QG ++ +I PL   +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDAVMQGDLEPVIGPLANEYQADQLAAI 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|254717939|ref|ZP_05179750.1| peptide chain release factor 1 [Brucella sp. 83/13]
          Length = 351

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 217/349 (62%), Positives = 276/349 (79%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      ++E  DL  +  D
Sbjct: 1   MDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAMRDD 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGTGG EAALF
Sbjct: 61  ASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALF 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFESGVHRVQRV
Sbjct: 121 AGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRV 180

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTTDSAVRITH
Sbjct: 181 PETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITH 240

Query: 249 IPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           IPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSGDRSERIRT
Sbjct: 241 IPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRSERIRT 300

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           YNF QGR+TDHRINLTLYKL+ V++G +D+++N L++ HQ  ++    E
Sbjct: 301 YNFPQGRVTDHRINLTLYKLDRVMEGDLDELVNALISDHQTALLAELGE 349


>gi|158426116|ref|YP_001527408.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
 gi|158333005|dbj|BAF90490.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
          Length = 357

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 196/358 (54%), Positives = 260/358 (72%), Gaps = 6/358 (1%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           + L   ++  L  R AE+E  ++     + Y++L  E++ +SP++ ++      +++  D
Sbjct: 3   IELPTAKLDQLVARHAEVEALLAAGAEGEEYVRLGREFSDLSPVVEQVRALRAAERDLAD 62

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E+RDLAQ EV  +E E+  L  E+   LLPKD  D++  ILE+RAGTG
Sbjct: 63  ARELLA----DPEMRDLAQSEVTRLEAELETLAKEVRLALLPKDAMDERGVILEVRAGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYAA + W VE+LS S+   GGYKE+VA + GRG ++R+KFESG
Sbjct: 119 GDEAALFAGDLFRMYARYAAEKGWSVELLSESEGTVGGYKEVVAAVHGRGAYARLKFESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE SGR+HTSAATVAVLPEA ++DVDI   D+RID  RA G+GGQHVN T+
Sbjct: 179 VHRVQRVPDTETSGRIHTSAATVAVLPEAEDVDVDINESDLRIDVYRAQGAGGQHVNKTE 238

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG++V    E+SQH+N+ RAM +LR+R+ D ER++    R+A+RK Q+GSG
Sbjct: 239 SAVRITHIPTGMVVAVQDERSQHRNKARAMALLRSRMLDEERQKADANRAADRKGQVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G  +D+II+PLLT HQA ++ +A E
Sbjct: 299 DRSERIRTYNFPQGRVTDHRINLTLYKLDEVMTGQALDEIIDPLLTEHQASLMAAADE 356


>gi|146306094|ref|YP_001186559.1| peptide chain release factor 1 [Pseudomonas mendocina ymp]
 gi|166223589|sp|A4XR61|RF1_PSEMY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145574295|gb|ABP83827.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           mendocina ymp]
          Length = 360

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +RF E+   + ++  +     +   ++EYA I P+I+      + + 
Sbjct: 1   MKASLLNKLDNLSDRFEELTALLGDAEVISKQTQFRAYSKEYAEIEPVIATFRELRKVQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ +  SD ++R++A+ EV   ++ +  LE+++  +LLPKD +D ++  LE+R
Sbjct: 61  DLEGAQALLKE--SDPDLREMAEEEVAQAKEALTTLEDKLQRMLLPKDPNDGRNVYLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VEVLS+++ + GG+KE++A + G  V++++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTG +V    E+SQH+NR +AM  L A+L D +      E S  RKL
Sbjct: 239 VNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQEAAAHKEISETRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY L  V+ G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLSEVMAGGVEAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|332969013|gb|EGK08053.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330]
          Length = 375

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 252/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   +       ++D Y KL +E+A ++PI+     Y Q + 
Sbjct: 18  MKPSILDKLQTLADRLEEVTALLGSPEATANMDTYRKLNQEHAELTPIVETYQQYRQAES 77

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD ++++ A  E+ A + +I +L+ E+  LLLPKD DDDK+  +EIR
Sbjct: 78  DLTDAQEML----SDPDMKEFAAEEIEATKIKIEQLDFELQKLLLPKDADDDKNIFIEIR 133

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY R+A   +W+ E++S+S++D GGYKE++  + G G +S++K
Sbjct: 134 AGTGGDEAALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLK 193

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  ++ +   D+RIDT RASG+GGQH
Sbjct: 194 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQH 253

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 254 INKTDSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKS 313

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I + L+  HQA+++ + 
Sbjct: 314 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMEEITSALIAEHQAELLAAM 373

Query: 356 SE 357
            +
Sbjct: 374 GD 375


>gi|300025029|ref|YP_003757640.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526850|gb|ADJ25319.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 359

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 209/357 (58%), Positives = 271/357 (75%), Gaps = 1/357 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L  R+  I+  ++   S   Y+KLT+E+A +SP  ++I    + + E  
Sbjct: 1   MTSLPRDKLDRLFERWMAIQDELNHGVSQAQYVKLTKEFAELSPAAAQIEALRKAEAESA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D ++D ++ DLA  E  A+ + I  LE ++   LLPKD  D+KS ILE+RAGT
Sbjct: 61  DLEQLLRDPSADKDMADLAYAERAALAERIGGLEQQLRIALLPKDAADEKSAILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLFRMY RYA LR WKVEV+S+S+ND GGYKEIVA+I+G GVF+R+KFES
Sbjct: 121 GGDEAALFAADLFRMYSRYADLRGWKVEVISASENDLGGYKEIVASITGEGVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEASGR+HTSAATVAVLPEA ++++DI  +DIRIDTMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPATEASGRIHTSAATVAVLPEAEDVEIDIKPDDIRIDTMRAGGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +SAVRITH+PTGI+V S+EKSQHQNR  AM VL+AR+Y++ER++ A ERS  RK Q+GSG
Sbjct: 241 ESAVRITHLPTGIVVVSAEKSQHQNRRLAMNVLKARVYELEREKAATERSDARKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           DRS+RIRTYNF QGR+TDHRINLTLY L+ V+ G  +D +++ L+T HQA M+   +
Sbjct: 301 DRSQRIRTYNFPQGRVTDHRINLTLYNLDEVMVGNGLDALVDALITDHQATMLAELN 357


>gi|161621297|ref|YP_585342.2| peptide chain release factor 1 [Cupriavidus metallidurans CH34]
 gi|119361586|sp|Q1LIF3|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   ++      ++D Y KL+ E+A +SP+  +   Y Q + 
Sbjct: 1   MKASISTKLDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+++ A  E+ A  + ++ LEN +  LLLPKD +DD++ +LEIR
Sbjct: 61  DLATAQALL----DDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL RMY RYA  R+W+VE++S S +D GGYKE++  I+G   FSR+K
Sbjct: 117 AGTGGEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E+ +V+I   D+R+DT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+PTGI+V    ++SQH+N+ +AMKVL AR+ D++ +    + +  R+ 
Sbjct: 237 VNKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEANTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D++I+ L   HQA  + + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDMIMDGDLDELISALSAEHQADQLAAL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|83859678|ref|ZP_00953198.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633]
 gi|83852037|gb|EAP89891.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633]
          Length = 357

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 199/357 (55%), Positives = 266/357 (74%), Gaps = 2/357 (0%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           + +   ++  + +RF ++E R+S +   D  +KL++E+A +  +  K       ++  ++
Sbjct: 1   MSIQDAKLDQVIDRFDQVEARLSAAADPDEIVKLSKEHAELKLVAEKARELKTARESFEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD ++ +LA+ E   ++K +  LE E+  LL+PKD DDD S +LEIRAGTG
Sbjct: 61  AEAIIED-GSDRDMVELAEEERQELKKRLPGLERELQLLLIPKDRDDDASIMLEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMYERYA+   WKV+V+ +S+ + GGYKEIVA++SG+GVF +MKFESG
Sbjct: 120 GDEAALFAGDLFRMYERYASNHGWKVDVVEASEAEVGGYKEIVASVSGKGVFGKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTSAATVAVLPE   +++DI  EDIRIDTMRASG+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESGGRIHTSAATVAVLPEPENVEIDIKDEDIRIDTMRASGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           SAVR+THIPTGI+V SSEKSQHQNR  AM+VL+ARLY+ ER+     R+A RK Q+GSGD
Sbjct: 240 SAVRMTHIPTGIVVVSSEKSQHQNRAIAMQVLKARLYEKERREKDEARAAERKGQVGSGD 299

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGR++DHRINLTLYKL+ +L G  +D++I+ LL+  QA  + +  E
Sbjct: 300 RSERIRTYNFPQGRVSDHRINLTLYKLDEILSGDALDEVIDALLSEDQAAKLAAMEE 356


>gi|329119839|ref|ZP_08248513.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327463995|gb|EGF10306.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 362

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +R  E+   +        +D Y +L +E+A ++P++     Y + + 
Sbjct: 5   MKPSILDKLQNLAHRLEEVTALLGSPEAVADMDNYRRLNQEHAELTPVVETYRAYTRAQS 64

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD +++D A  E  A + +I  L+ E+  LLLPKD DDDK+  +EIR
Sbjct: 65  DLADAQEML----SDPDMKDFAAEETEAAKAKIDALDLELQKLLLPKDADDDKNIFIEIR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S++++D GGYKE++  + G G +S++K
Sbjct: 121 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESDLGGYKEVIVRLIGLGAYSKLK 180

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 181 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 240

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 241 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 300

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I   L+  HQA+++ + 
Sbjct: 301 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMEEITAALIAEHQAELLAAM 360

Query: 356 SE 357
            +
Sbjct: 361 GD 362


>gi|282850388|ref|ZP_06259767.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
 gi|294792026|ref|ZP_06757174.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
 gi|294793891|ref|ZP_06759028.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
 gi|282579881|gb|EFB85285.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
 gi|294455461|gb|EFG23833.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
 gi|294457256|gb|EFG25618.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 172/357 (48%), Positives = 252/357 (70%), Gaps = 4/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++++F ++E R+S+   +   D + KLT ++A +S  +     Y +      
Sbjct: 1   MLVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGID 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   VI D + D E R++AQ E+  ++ +  ELE ++  LLLPKD +DDK+ I+EIR G 
Sbjct: 61  EAMEVIEDKSMDEEFREMAQEELKDLKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGA 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY +YA  + W+ E++ +++ + GG+KE++ ++ G  V+S+MKFES
Sbjct: 121 GGDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE  GRVHTS  TVAVLPE  ++D+++  +D++IDT RASG+GGQH+N T
Sbjct: 181 GVHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITH+P+GI+V    ++SQ QNR +AM+VLRA+L D   +   +  +A+RK Q+G+
Sbjct: 241 ESAVRITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQDQAEQEAISSMAADRKSQVGT 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRINLTLYKL+ +L G +D+II  L  A QA  +  A+
Sbjct: 301 GDRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQEAN 357


>gi|221201722|ref|ZP_03574760.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
 gi|221207203|ref|ZP_03580213.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221213331|ref|ZP_03586306.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221166783|gb|EED99254.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221172791|gb|EEE05228.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221178538|gb|EEE10947.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D  +RD A+ E+ +  + +  LE E+  +LLPKD +DD++  +EIR
Sbjct: 61  DETAAQELLA----DPSMRDFAEEEIRSARERMARLEVELQKMLLPKDPNDDRNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|261867616|ref|YP_003255538.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412948|gb|ACX82319.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + ++  +   D +   ++EYA +  ++   + ++Q   
Sbjct: 1   MKPSIINKLDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + E+ ++E  +  LLLPKD +D+ +C LEIR
Sbjct: 61  NLEEAQLLL----DDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VEVLS ++++ GG+KEI+A +SG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG++V    E+SQH+N+ +A+ VL +RL   E++++A E++  R+ 
Sbjct: 237 INKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G IDD+I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|332558342|ref|ZP_08412664.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
 gi|332276054|gb|EGJ21369.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
          Length = 351

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 192/354 (54%), Positives = 252/354 (71%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E R+S   +      L+ EYA + P++++IS Y    ++  + 
Sbjct: 1   MVPMDRLLQIVRRFEFLEARLSAGAAPAEIAALSREYAELKPVVAEISAYRTALEDLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD E+R LA+ E+ A+   I  +E  +   LLPKD  D +  ILEIR GTGG
Sbjct: 61  EAML----SDPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  + W+ E+L  + ++ GG +E  A I G G F+R+K+ESGV
Sbjct: 117 EEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GR+HTSAATVAVLPEA E+D++IP  DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VLRARLYD+ER+R+A+ RSA+RK Q+GSGDR
Sbjct: 237 AVRITHLPTGIIVTSSEKSQHRNREIAMQVLRARLYDLERQRLADARSADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY L  ++ G + ++I+ L    QA  +    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQAARLAEME 350


>gi|323142096|ref|ZP_08076944.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT
           12067]
 gi|322413483|gb|EFY04354.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT
           12067]
          Length = 355

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L++R+ ++E ++S+   +       K T+ +A + PI++    Y    +   +
Sbjct: 1   MLDKLQALEDRYLDLEAKISDPEVIADQTNWLKATKAHAKLEPIVTAYREYRDMIKARDE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E+ ++A+ E+  ++ +I E E ++  LLLP D +DDK+ I+EIR G G
Sbjct: 61  AEELLA-AGDDEELVEMAKEELKELKPQIEEYEEKLTILLLPSDPNDDKNVIVEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G LFRMY RYA  R W+VEV+ S+  + GG+KE+V  ISG  V+SRMKFESG
Sbjct: 120 GDEAALFAGVLFRMYLRYAETRGWRVEVMDSNPTELGGFKEVVFQISGDSVYSRMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GRVHTS  TVAVLPEA E+DV+I   D+R+DT RA G+GGQ+VN T+
Sbjct: 180 VHRVQRVPETESQGRVHTSTVTVAVLPEAEEVDVEINPADLRVDTYRAGGAGGQYVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTGI+     EKSQ +NR + M+VLRAR+ +  ++      + +RK Q+G+G
Sbjct: 240 SAVRITHIPTGIVAQCQDEKSQLKNREKCMRVLRARILEQAQEEQRAATAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYN+ QGR+TDHRI LTL+KL+ ++ G +D+++  L+TA Q++ +  
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLHKLDSIVNGDLDELLGALITAKQSEQLRQ 353


>gi|49473852|ref|YP_031894.1| peptide chain release factor 1 [Bartonella quintana str. Toulouse]
 gi|61214617|sp|Q6G0R0|RF1_BARQU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49239355|emb|CAF25688.1| Peptide chain release factor 1 [Bartonella quintana str. Toulouse]
          Length = 359

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 222/355 (62%), Positives = 283/355 (79%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  L+ RF  IE +M+++P    Y+KL  EYA + PI++ I   +    E  
Sbjct: 1   MVSLPKDRMRQLEKRFEIIESQMAKNPDSGTYVKLASEYADLQPIVTSIRTLNALSIEIT 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L T+I D  +D E+R+LAQ E+  + +++ +LE E+  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  ELETIISDKLTDVEMRNLAQEELPPLFQKMEKLEKELQILLLPKDITDEKSAIIEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALFVGDLFRMYERYA    WKVEV+S ++ + GGYKEI+ATISG+GVFS++KFES
Sbjct: 121 GGSEAALFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEIIATISGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE SGR+HTSAATVAVLPEA EID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+E+K+  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIEQKKAESERSASRKNQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +L+G +D++IN L++ +Q  ++   
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRILEGDLDELINALISDYQTALLTEM 355


>gi|315497942|ref|YP_004086746.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
 gi|315415954|gb|ADU12595.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
          Length = 358

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 195/357 (54%), Positives = 258/357 (72%), Gaps = 2/357 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  + +RF  IE RM  +      +KL++E+A + P++  ++   + +    
Sbjct: 1   MIRLPQAKLDQVVDRFRMIEARMESATDGTEIVKLSKEHAELKPVVDAVTALLKARASGP 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +I    +D E+  LAQ E   +++ + ELE  +  LL PKD D++ S ILE+RAGT
Sbjct: 61  ELEELIAL--NDPELSPLAQEEFQELKERLPELERGVALLLAPKDKDENASAILEVRAGT 118

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY RYAA + W+VE+ S S+ D GGYKEI+A+++G GVF ++KFES
Sbjct: 119 GGDEAALFAGDLFRMYSRYAASQGWRVEIDSISEGDAGGYKEIIASVTGDGVFGKLKFES 178

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEA GR+HTSAATVAVLPEA ++++DI  +DIRIDT RASGSGGQHVN T
Sbjct: 179 GVHRVQRVPATEAGGRIHTSAATVAVLPEAEDVEIDIQDKDIRIDTYRASGSGGQHVNKT 238

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGI+ TSSEKSQH NR  AM+ L+ARLYD++R+ +   RS  RK Q+GSG
Sbjct: 239 DSAVRITHLPTGIVATSSEKSQHMNRQIAMRNLKARLYDIQRQALDAARSDARKSQVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYN+ QGR++DHRINLTLY L   ++G +D +IN L+   QA  +    E
Sbjct: 299 DRSERIRTYNYPQGRVSDHRINLTLYNLSQFMEGEMDQMINALIADDQAARLAMLEE 355


>gi|254362308|ref|ZP_04978420.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
 gi|153093888|gb|EDN74816.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
          Length = 360

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++  +   D +   ++EY+ +  ++   + + +   
Sbjct: 1   MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++D+A  E+   + EI  LE  +  LLLPKD +D+ +  LEIR
Sbjct: 61  DIEEAQLLL----DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RY   ++W++E +S+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|146277160|ref|YP_001167319.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17025]
 gi|166223594|sp|A4WRK0|RF1_RHOS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145555401|gb|ABP70014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 351

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 189/354 (53%), Positives = 248/354 (70%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E R+S   +      L+ EYA + P++++I+ Y    ++  + 
Sbjct: 1   MVPMDRLLQIVRRFEFLEARLSAGAAPAEIAALSREYAELKPVVAEIAAYRTALEDLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R LA+ E+  +   I E+E  +   LLP+D  D +  ILEIR GTGG
Sbjct: 61  EAMLA----DPEMRALAEDELPRLRARIPEMEQALRLALLPRDAADARPAILEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  + W+ E+L  + ++ GG +E  A I G G F+R+K+ESGV
Sbjct: 117 EEAALFAGDLLRMYQRYAEAQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GR+HTSAATVAVLPEA E+D+ IP  DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETEAQGRIHTSAATVAVLPEAEEVDIAIPAADIRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VLRARLYD+ER+R+A  RSA+RK Q+GSGDR
Sbjct: 237 AVRITHLPTGIVVTSSEKSQHRNREIAMQVLRARLYDLERQRLAEARSADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY L  ++ G + ++I  L    QA  +    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYALPQIMAGDLAEVIAALTAHDQAARLAEME 350


>gi|212213424|ref|YP_002304360.1| peptide chain release factor 1 [Coxiella burnetii CbuG_Q212]
 gi|238058711|sp|B6J390|RF1_COXB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|212011834|gb|ACJ19215.1| bacterial peptide chain release factor 1 [Coxiella burnetii
           CbuG_Q212]
          Length = 361

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 172/361 (47%), Positives = 251/361 (69%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R++EI   +S+S  ++    Y +L +EYA + PI+     + Q ++
Sbjct: 1   MKPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +    +  +   D E+R LA+ E+  +  +  ELE+++  LL+PKD +D+ +  LEIR
Sbjct: 61  AIESAEEMQQEK--DPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDELNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG+EAA+F GDLFRMY RYA  + W+V ++S+ + + GG+KE++A + G GV+S++K
Sbjct: 119 AGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PE  EID       ++RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+N+ RAM +L+++L   ER +   E++A RK 
Sbjct: 239 VNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I PL+   QA+ +   
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIRELQAEQLAEL 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|319407578|emb|CBI81228.1| peptide chain release factor 1 [Bartonella sp. 1-1C]
          Length = 359

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 222/355 (62%), Positives = 288/355 (81%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  L+ RF  IE +M+E+P+ + Y+KL  EYA + PII+ I   +  ++E  
Sbjct: 1   MVSLPQDRMKQLEKRFKIIESQMAENPNAETYVKLASEYAELQPIIAPIRTLNSLRKEIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L T+I D  +D+E+R+LAQ E+ ++ ++I+ELE E+  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  ELETIISDIQTDTEMRNLAQEELSSLSQKIQELEKELQILLLPKDIADEKSVIIEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF G+LFRMYERYA    WKVE++S SD + GGYKEI+ATISG+GVFS++KFES
Sbjct: 121 GGSEAALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATISGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE  GR+HTSAATVAVLPEA EID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRSEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+ER++  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKTQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ++++IN L++ HQ  ++   
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQTTLLTEM 355


>gi|126462320|ref|YP_001043434.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17029]
 gi|166223593|sp|A3PJZ6|RF1_RHOS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126103984|gb|ABN76662.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 351

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 191/354 (53%), Positives = 252/354 (71%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E R+S   +      L+ EYA + P++++IS Y    ++  + 
Sbjct: 1   MVPMDRLLQIVRRFEFLEARLSAGAAPAEIAALSREYAELKPVVAEISAYRTALEDLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD E+R LA+ E+ A+   I  +E  +   LLPKD  D +  ILEIR GTGG
Sbjct: 61  EAML----SDPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  + W+ E+L  + ++ GG +E  A + G G F+R+K+ESGV
Sbjct: 117 EEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GR+HTSAATVAVLPEA E+D++IP  DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VLRARLYD+ER+R+A+ RSA+RK Q+GSGDR
Sbjct: 237 AVRITHLPTGIIVTSSEKSQHRNREIAMQVLRARLYDLERQRLADARSADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY L  ++ G + ++I+ L    QA  +    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQAARLAEME 350


>gi|304570793|ref|YP_002516272.2| peptide chain release factor 1 [Caulobacter crescentus NA1000]
 gi|22096040|sp|Q9A9V5|RF1_CAUCR RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 356

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 195/355 (54%), Positives = 265/355 (74%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++  + +RF E+E RM  +      +KL++E+A + P+   +    +   E  +L 
Sbjct: 3   LPQARLDQVLDRFREVEARMGAATDGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELD 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +     SD E+ ++ + E+ A+++++  +E E+  +L PKD D++ S ILE+RAGTGG 
Sbjct: 63  VMA----SDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY+RYA  + W+VE+ S S+ + GG+KEIVA+I+G GVF R+KFESGVH
Sbjct: 119 EAALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTSAATVAVLPEA +++++I   D+RIDT R+SG+GGQHVN TDSA
Sbjct: 179 RVQRVPATEAQGRIHTSAATVAVLPEAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSA 238

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++VTSSEKSQHQNR RAMK L+ARLYD++R+ + + RS  RK Q+GSGDRS
Sbjct: 239 VRITHLPTGVVVTSSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRS 298

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR+TDHRINLTLY L  +++G  +DD+INPL+   QA+ + S  E
Sbjct: 299 ERIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQAERLASLEE 353


>gi|29655248|ref|NP_820940.1| peptide chain release factor 1 [Coxiella burnetii RSA 493]
 gi|154706179|ref|YP_001425370.1| peptide chain release factor 1 [Coxiella burnetii Dugway 5J108-111]
 gi|161830069|ref|YP_001596008.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
 gi|165924041|ref|ZP_02219873.1| peptide chain release factor 1 [Coxiella burnetii RSA 334]
 gi|212219474|ref|YP_002306261.1| peptide chain release factor 1 [Coxiella burnetii CbuK_Q154]
 gi|30581025|sp|P47849|RF1_COXBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039967|sp|A9KGY3|RF1_COXBN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039968|sp|A9N9K2|RF1_COXBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058710|sp|B6J625|RF1_COXB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29542520|gb|AAO91454.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
           RSA 493]
 gi|154355465|gb|ABS76927.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
           Dugway 5J108-111]
 gi|161761936|gb|ABX77578.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
 gi|165916526|gb|EDR35130.1| peptide chain release factor 1 [Coxiella burnetii RSA 334]
 gi|212013736|gb|ACJ21116.1| bacterial Peptide Chain Release Factor 1 (RF-1) [Coxiella burnetii
           CbuK_Q154]
          Length = 361

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 172/361 (47%), Positives = 252/361 (69%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R++EI   +S+S  ++    Y +L +EYA + PI+     + Q ++
Sbjct: 1   MKPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +    +  +   D E+R LA+ E+  +  +  ELE+++  LL+PKD +D+++  LEIR
Sbjct: 61  AIESAEEMQQEK--DPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG+EAA+F GDLFRMY RYA  + W+V ++S+ + + GG+KE++A + G GV+S++K
Sbjct: 119 AGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PE  EID       ++RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+N+ RAM +L+++L   ER +   E++A RK 
Sbjct: 239 VNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I PL+   QA+ +   
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIRELQAEQLAEL 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 360

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++      + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLIKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++RD+A  EV   ++++ +LE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMRDMAVEEVRETKQQLVDLEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|303239757|ref|ZP_07326281.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
 gi|302592694|gb|EFL62418.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
          Length = 360

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 175/354 (49%), Positives = 253/354 (71%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++   +NR+ E+  ++S+   +   D Y KL +E+A +  ++ K   Y +  QE  D  
Sbjct: 3   DRLQAAENRYEEMNHKLSDPAVIENQDEYRKLMKEHAELQELVGKYGEYKKVTQEIADAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D + R++ ++E+   E+ + +++ E+  LLLPKD +D+K  I+EIR G GG 
Sbjct: 63  ELLNDK-LDKDFREMVEMELKEAEEGLEKIKKELKILLLPKDPNDEKDVIVEIRGGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFRMY RYA    WK E+L S+  + GG+KE+V  I G G FS++KFESGVH
Sbjct: 122 EAALFAGVLFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TEA+GR+HTS  TVAVLPE  E+DVDI   D+RIDT RASG+GGQH+N TDSA
Sbjct: 182 RVQRIPETEANGRIHTSTVTVAVLPEVEEVDVDINPNDLRIDTYRASGAGGQHINKTDSA 241

Query: 244 VRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTG++V    ++SQ++N+ +AM+VLR++LY++ +++  +E +  RK Q+G+GDR
Sbjct: 242 IRITHIPTGLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQNSEIAQARKGQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ QGR+TDHRI LTLYKLE +L+G +D++I+ L+T  QA+ +GS  
Sbjct: 302 SERIRTYNYPQGRMTDHRIGLTLYKLESILEGDMDEVIDALITTDQAERLGSGG 355


>gi|269798159|ref|YP_003312059.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
 gi|269094788|gb|ACZ24779.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
          Length = 360

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 172/357 (48%), Positives = 252/357 (70%), Gaps = 4/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++++F ++E R+S+   +   D + KLT ++A +S  +     Y +      
Sbjct: 1   MLVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGID 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   VI D + D E R++AQ E+  ++ +  ELE ++  LLLPKD +DDK+ I+EIR G 
Sbjct: 61  EAMEVIEDKSMDEEFREMAQEELKELKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGA 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY +YA  + W+ E++ +++ + GG+KE++ ++ G  V+S+MKFES
Sbjct: 121 GGDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE  GRVHTS  TVAVLPE  ++D+++  +D++IDT RASG+GGQH+N T
Sbjct: 181 GVHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITH+P+GI+V    ++SQ QNR +AM+VLRA+L D   +   +  +A+RK Q+G+
Sbjct: 241 ESAVRITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQDQAEQEAISSMAADRKSQVGT 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRINLTLYKL+ +L G +D+II  L  A QA  +  A+
Sbjct: 301 GDRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQEAN 357


>gi|254787712|ref|YP_003075141.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
 gi|259585256|sp|C5BSZ6|RF1_TERTT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237684441|gb|ACR11705.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
          Length = 360

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 169/361 (46%), Positives = 250/361 (69%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M     +++ +L  R+ E+   + +   +    K   L +EY+ + P++     Y    +
Sbjct: 1   MKDSIKQKLENLVERYDEVGALLGDPDIIADQKKFRDLGKEYSELEPVVICYQEYRTVIE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   ++ D   D+++R++AQ E+   E ++  LE ++  LLLPKD +D+K+  LEIR
Sbjct: 61  NIAEAKMLMND--GDADMREMAQEELKTAEAQLEPLETQLQKLLLPKDPNDEKNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA    W++E++S +  + GGYKE++  + G+GV+S++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERAGWRIEIISENAGEHGGYKELITRVVGQGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PEA E +  ++   D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAIMPEADESEEVELNKGDLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    E+SQH+NR +AM +L AR+   + ++ A E+++ RK 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDERSQHKNRAKAMSLLAARINSAQAEQFAAEQASERKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G +D++I PL+  HQA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEIMEGSLDEVIQPLVNEHQADQLAAL 358

Query: 356 S 356
           +
Sbjct: 359 A 359


>gi|238022362|ref|ZP_04602788.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
 gi|237866976|gb|EEP68018.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
          Length = 358

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +R  E+   +       ++D+Y +L +E+A ++PI+     Y Q + 
Sbjct: 1   MKPSIQSKLQNLSHRLEEVTALLGSPEATANMDSYRRLNQEHAELTPIVDTYHAYTQAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++D A  E+ A +  I  L+ E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLADAQEML----SDPEMKDFAFEEIQAAKDTIERLDLELQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+ E++S+S++D GGYKE++  + G G +S++K
Sbjct: 117 AGTGGDEAALFAGDLLRMYTRYAERNRWQTEIVSASESDLGGYKEVIVRLVGLGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E   +++  +D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +A+KVL ARL D++++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLNDIQKREAHAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +D+I + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMDEITSALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT]
 gi|119361559|sp|Q1GYE8|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus
           flagellatus KT]
          Length = 360

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 250/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L  R  E+   +S       +D Y K+T E+A I+PI+ +   Y+Q + 
Sbjct: 1   MKPSMIKKLATLSERLDELNRLLSSEDVTNDIDNYRKITREHAEITPIVEQFRAYEQAEI 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D E+++ AQ E  A ++++ ++E ++  LLLPKD +D+++  LEIR
Sbjct: 61  DIKEAQAMLA----DPEMKEFAQEETEAGKQKLDDIEKQLQKLLLPKDPNDERNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDLFRMY RYA  + WKVE++S+++++ GGYKEI+A I G G +S++K
Sbjct: 117 AGTGGDESALFAGDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAVLPE  E  DV I   DIRIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH PTGI+V     +SQH N+ +AM+VL AR+   +     ++ ++ R+ 
Sbjct: 237 INKTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVDEQQSKIASERRS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGRITDHRINLTLYK++ + +G +D++IN L   HQA ++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELINALAAEHQADLLATL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T]
 gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T]
          Length = 360

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 248/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L NR  E++  ++       ++A+ +L+ E A I P+++    +   + 
Sbjct: 1   MKQSIRDKLEHLANRLEELDRTLASEEGARDMNAFRELSRERAEIEPVVALYREHRLAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+R+L ++E+   E  I  LE E+   LLP+D +D ++  LEIR
Sbjct: 61  DCATARELLA----DPEMRELGELELAEGEARIEALEAELQRALLPRDPNDARNLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA  ++WKVE++S+S++D GGYKE++A + G G +S++K
Sbjct: 117 AGTGGDEAALFAGDLLRMYTRYAERQRWKVEIVSASESDLGGYKEVIARVVGNGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAVLPEA E++  DI   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPVTETQGRIHTSACTVAVLPEADEVEAVDINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTGI+V    ++SQH+N+ +AM VL ARLYD   +   +  +A RK 
Sbjct: 237 INKTDSAVRITHIPTGIVVECQDDRSQHRNKAQAMAVLAARLYDARVRAQQSAEAAQRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V+QG +D+I++ L   HQA ++ + 
Sbjct: 297 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDAVMQGELDEIVDALTLEHQADLLAAL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|225019405|ref|ZP_03708597.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
           DSM 5476]
 gi|224947822|gb|EEG29031.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
           DSM 5476]
          Length = 361

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 241/355 (67%), Gaps = 4/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++   + RF EI  ++ +   V+    Y  L  E   ++PII K   Y   K   ++  
Sbjct: 6   DKLSLTEKRFDEINEKLMDPNVVNDQHAYRDLMRELKHLTPIIDKYREYKAAKDNLEEAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E +++ Q +    ++ I +L  E+  LLLP D +DDK  I+EIR G GG 
Sbjct: 66  EMLSEGGLDKEFKEMVQEQYSESQQAIEDLGEELKILLLPTDPNDDKDVIIEIRGGAGGE 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  YA  + WK E+LS+++ + GG+KE+   +SG G +SR+KFESGVH
Sbjct: 126 EAALFAYNLYRMYTMYAEAKGWKTEILSANETELGGFKEVSFEVSGEGAYSRLKFESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEASGR+HTS  TVAVLPEA E++ DI   DI++DT RASG+GGQHVN T+SA
Sbjct: 186 RVQRVPETEASGRIHTSTVTVAVLPEAEEVEFDINPTDIQVDTFRASGAGGQHVNKTESA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +R+T++PTG++V    E+SQH+N+ +AMK+LR RLY+   K   ++ ++ RK Q+G+GDR
Sbjct: 246 IRLTYLPTGLVVECQDERSQHKNKDKAMKILRTRLYEQAMKEATDKIASERKAQVGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGRITDHRI LTLY LE  + G ID+II+ L+TA QA  + + SE
Sbjct: 306 SERIRTYNYPQGRITDHRIGLTLYHLEQNMNGDIDEIIDALITADQAAKLAAESE 360


>gi|332800047|ref|YP_004461546.1| peptide chain release factor 1 [Tepidanaerobacter sp. Re1]
 gi|332697782|gb|AEE92239.1| Peptide chain release factor 1 [Tepidanaerobacter sp. Re1]
          Length = 356

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 176/356 (49%), Positives = 258/356 (72%), Gaps = 4/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+  ++++   +    +   LT+E+A++  I++    Y +  ++ ++
Sbjct: 1   MIEKLEIIEKKYDELTKKIADPEIIARQEEWIGLTKEHASLEEIVTNFREYKEVLKQLEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D E+  L + E+ A+E++  +L+ ++  LLLP+D +DD++ I+EIRAGTG
Sbjct: 61  NSELLEDAAGDIEMEQLIKSELEALEEKKSKLQEQLRILLLPQDPNDDRNVIMEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  + WKVE++ S+  + GG+KE++  I+G+G +SR+K+ESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEKQGWKVEIIDSNPTELGGFKEVIFEINGKGAYSRLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP+TEA GR+HTSAATVAVLPEA E+D++I  +D+RID  RASG GGQ VNTTD
Sbjct: 181 VHRVQRVPSTEAGGRIHTSAATVAVLPEAHEVDIEINPDDLRIDIYRASGHGGQGVNTTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG++V    E+SQ +N+ +AMKVLRARL +  ++    E + NR+ Q+GSG
Sbjct: 241 SAVRITHIPTGLVVTCQDERSQLKNKDKAMKVLRARLLEKVQEEQEREIAQNRRSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGRITDHRINLT ++L  VLQG +D++I+ L+   QAK +  A 
Sbjct: 301 DRSERIRTYNFPQGRITDHRINLTTHQLTNVLQGELDELIDALVAEDQAKKLAQAE 356


>gi|623028|emb|CAA55563.1| unnamed protein product [Coxiella burnetii]
          Length = 361

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 173/361 (47%), Positives = 253/361 (70%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R++EI   +S+S  ++    Y +L +EYA + PI+     + Q ++
Sbjct: 1   MKPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +    +  +   D E+R LA+ E+  +  +  ELE+++N LL+PKD +D+++  LEIR
Sbjct: 61  AIESAEEMQQEK--DPELRKLAEEELEQLTLKKEELEDQLNLLLVPKDPNDERNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG+EAA+F GDLFRMY RYA  + W+V ++S+ + + GG+KE++A + G GV+S++K
Sbjct: 119 AGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PE  EID       ++RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+N+ RAM +L+++L   ER +   E++A RK 
Sbjct: 239 VNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I PL+   QA+ +   
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIRELQAEQLAEL 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 360

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++      + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLLKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ +LE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKEQLVDLEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|254731050|ref|ZP_05189628.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
          Length = 351

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 215/349 (61%), Positives = 274/349 (78%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  DL  +  D
Sbjct: 1   MDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAMRDD 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGTGG EA LF
Sbjct: 61  ASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLF 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFESGVHRVQRV
Sbjct: 121 AGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRV 180

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTTDSAVRITH
Sbjct: 181 PETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITH 240

Query: 249 IPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           IPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSGDRSERIRT
Sbjct: 241 IPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRSERIRT 300

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           YNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 301 YNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQTALLAELGE 349


>gi|310816145|ref|YP_003964109.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
 gi|308754880|gb|ADO42809.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
          Length = 352

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 183/355 (51%), Positives = 248/355 (69%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  L +RF  +E +M    S      L  EY+ + P++  ++ Y   + +    
Sbjct: 1   MIPAEKLAQLTDRFQFLEAKMQSGLSGAEIAALGREYSELKPVVDTLARYQALEADLASA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              +     D ++R  A+ E+  +     E E E+   LLP+D  D +  +LEIR GTGG
Sbjct: 61  EEWLA----DPDMRAFAEEELPRLRTAFAEAEIEMQKALLPRDAADGRPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF  DL RMY+RY+  + W+ E++  ++ + GG KE+V  I G GVF+RMK+ESGV
Sbjct: 117 DEASLFAADLLRMYQRYSESKGWRFEIIEEAETELGGIKEVVVRIEGEGVFARMKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA  +D++I   DIRIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAEAVDIEINPGDIRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSS+KSQH+NR  AM VLRARLYD+ER R+   RSA+RK Q+GSGDR
Sbjct: 237 AVRITHLPTGIIVTSSQKSQHRNRELAMDVLRARLYDMERSRVDGARSADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRIN+TLY+L+ +LQG +D+I++ L+   QA ++   +E
Sbjct: 297 SERIRTYNFPQGRMTDHRINMTLYRLDQILQGDLDEIVDALVADAQATLLAEMAE 351


>gi|302872094|ref|YP_003840730.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574953|gb|ADL42744.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 355

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 247/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+E ++++   +     + KL +E++ + PI+ K   Y +     ++
Sbjct: 1   MIEKLQVIEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKKILNTIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D +   L + E+   +++   +E ++  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  AEELL-DTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA  + WKVEV+S+S++D  G+KE++  ISG+G +SR+K+ESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPE  +++V+I  ED+ IDT RA G+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H PTGI+V    E+SQH NR RAMK+LRARLYD  +     E  + R+ Q+G+G
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTLYKLE VL G +D+II+ L+T  Q + +    
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALITHFQTEKLKEVG 355


>gi|294678208|ref|YP_003578823.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
 gi|294477028|gb|ADE86416.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
          Length = 351

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 190/355 (53%), Positives = 250/355 (70%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E +++ +        L+ EY+ + P++++I+ Y Q   +  + 
Sbjct: 1   MVPLDKLAQITARFEFLEAKLNTALPPAEIATLSREYSDLRPVVTEIAAYRQSLDDLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              +    SD E++ LA+ E+  ++  I  +E  +   LLPKD  D +  ILEIR GTGG
Sbjct: 61  EGWL----SDPEMKTLAEEELPRLKARIPAMEQALRLALLPKDAADARPAILEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL+RMYER+A    W+ E L  +  + GG KE +A I G GVF+R+K+ESGV
Sbjct: 117 EEAALFAHDLWRMYERHAEKMGWRFERLEFTATELGGVKEAMARIEGEGVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GR+HTSAATVAVLPEA E+D+DIP  DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETEAGGRIHTSAATVAVLPEAEEVDIDIPAADIRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQHQNR  AM VLRARLY++ER+R+A ER+ NR+ Q+GSGDR
Sbjct: 237 AVRITHLPTGIIVTSSEKSQHQNRANAMAVLRARLYEIERERLATERAENRRSQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLY L  +L G + ++I+ L+   QA  +    E
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYALPQILAGDLGEVIDALVAHDQAAKLAEMDE 351


>gi|238019080|ref|ZP_04599506.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
 gi|237864335|gb|EEP65625.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
          Length = 360

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 172/357 (48%), Positives = 252/357 (70%), Gaps = 4/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++++F ++E R+S+   +   D + KLT ++A +S  +     Y +      
Sbjct: 1   MLVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLAGID 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   VI D + D E R++AQ E+  ++ +  ELE ++  LLLPKD +DDK+ I+EIR G 
Sbjct: 61  EAMEVIEDKSMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGA 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY +YA  + W+ E++ +++ + GG+KE++ ++ G  V+S+MKFES
Sbjct: 121 GGDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE  GRVHTS  TVAVLPE  ++D+++  +D++IDT RASG+GGQH+N T
Sbjct: 181 GVHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITH+P+GI+V    ++SQ QNR +AM+VLRA+L D   +   +  +A+RK Q+G+
Sbjct: 241 ESAVRITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQDQAEQEAISSMAADRKSQVGT 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRINLTLYKL+ +L G +D+II  L  A QA  +  A+
Sbjct: 301 GDRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQEAN 357


>gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
 gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
          Length = 355

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 166/357 (46%), Positives = 250/357 (70%), Gaps = 9/357 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R  E++  ++E      +D Y K++ E A + P+++  + +   + + + 
Sbjct: 1   MRDRLEQLAHRLIEVDALLAEPEIAGDMDRYRKISRERAELDPVVAVFNSFLATEGDIKT 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D ++R +A+ E++  ++++ +LE ++  LLLP+D DD +S  LEIRAGTG
Sbjct: 61  AQEMMA----DPDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E+ALF GDL RMY RYA    W+VE++S+SD++ GGYKE++A + G GV+ R+KFESG
Sbjct: 117 GDESALFAGDLLRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTT 240
            HRVQRVPATE  GR+HTSA TVAVLPEA E    +    D+RIDT RASG+GGQH+N T
Sbjct: 177 AHRVQRVPATETQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKT 236

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+TH+PTG++V    ++SQH+N+ +A++VL ARL D +++   ++ +A RK  +G+
Sbjct: 237 DSAVRVTHLPTGLVVECQDDRSQHRNKDKALQVLAARLKDKQQQEQHDKEAAQRKSLVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRINLTLYKL +++ G ++++ N LL  HQA+ + +  
Sbjct: 297 GDRSERIRTYNYPQGRVTDHRINLTLYKLGHIMDGDLNELTNALLAEHQAEQLAALG 353


>gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1]
 gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 359

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 257/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +++     S+D + K+T E+A + P+++    Y Q  +
Sbjct: 1   MKPSMLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D +++  AQ E+   +  +  LE ++  +LLPKD +D+++  LEIR
Sbjct: 61  DIRTAQELLA----DPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S+S+++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA E+ DV+I   DIRIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+V    ++SQH+N+ +AMKVL AR+ DV+ ++  +E +A RK 
Sbjct: 237 INKTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL++++ G +D++ N L+T HQA+++   
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|182420270|ref|ZP_02951499.1| peptide chain release factor 1 [Clostridium butyricum 5521]
 gi|237666557|ref|ZP_04526542.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182375865|gb|EDT73457.1| peptide chain release factor 1 [Clostridium butyricum 5521]
 gi|237657756|gb|EEP55311.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 360

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 171/357 (47%), Positives = 253/357 (70%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N++ E+ +++S+   +   + + KL +E+A +  I++    Y +  ++ +
Sbjct: 1   MLLDKLEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYKEYKKVTEDLE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++ + N D E+R++   E+  + K   ELEN I  LLLPKD +DDK+  +EIR G 
Sbjct: 61  ANKEMLSEEN-DKEMREMLSEEISDLTKREVELENHIQILLLPKDPNDDKNVFVEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMY RYA  ++W VE++S ++ D GG+KE+V  I G G +S++K+ES
Sbjct: 120 GGEEAALFAYNLFRMYTRYAETQRWAVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTS +TVAVLPE  +++++I  +D+RID  RASG+GGQ VNTT
Sbjct: 180 GVHRVQRVPDTESSGRIHTSTSTVAVLPEVDDVEIEISEKDLRIDVFRASGNGGQCVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+G++V    EKSQ +N+ +AMKVL++RLY+   +  A   + +RK Q+G+
Sbjct: 240 DSAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLKSRLYEQAERERAEGIAEDRKSQVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRI LTLYKLE  L G ID++IN L+TA QA+ + +  
Sbjct: 300 GDRSERIRTYNYPQGRVTDHRIGLTLYKLETFLNGDIDEMINALITADQAEKMKAMG 356


>gi|257464821|ref|ZP_05629192.1| peptide chain release factor 1 [Actinobacillus minor 202]
 gi|257450481|gb|EEV24524.1| peptide chain release factor 1 [Actinobacillus minor 202]
          Length = 360

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 256/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++  ++    +   ++EYA +  ++S  + + +   
Sbjct: 1   MKDSIINKLESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++D+A  E+ A + EI +LE  +  LLLPKD +D+ +C LEIR
Sbjct: 61  DIEEAQILL----DDPDMKDMAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RYA  ++W++E LS+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE+++ A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           S+
Sbjct: 357 SD 358


>gi|325527071|gb|EGD04495.1| peptide chain release factor 1 [Burkholderia sp. TJI49]
          Length = 360

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 182/362 (50%), Positives = 256/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++G    D  +RD A+ E+ +  + +  LE E+  +LLPKD +DD++  LEIR
Sbjct: 61  DETAAQELLG----DPSMRDFAEDEIRSARERMVRLEVELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
 gi|166223588|sp|Q1IEX1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
          Length = 360

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EYA + P+I+    + + + 
Sbjct: 1   MKASLLNKLDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIACYVGWRKVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D   D ++R++A  EV   ++++  LE+++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKDA--DPDLREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W++E+LS ++ + GGYKEI+A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR RAM  L A+L D++     N  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
 gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           K40]
 gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
          Length = 360

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++      + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|254447802|ref|ZP_05061267.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
 gi|198262582|gb|EDY86862.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++ +L  R  E+ + +S+   ++    +  L++EYA + P+    S Y  +  
Sbjct: 1   MKDSIRQKLENLVARHEEVGMLLSDPDVINDQNRFRDLSKEYAELEPVTKTFSEYQTQSD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  ++     D +++++AQ E+ +   EI  LE E+  LLLP D  D+ +  +EIR
Sbjct: 61  NLSTAEEML----DDPDMKEMAQEEIDSARVEIERLEQELQILLLPSDPHDNSNIYVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDL RMY RYA  + W+VE+ + S+ + GGYKE++A I G+G FS+MK
Sbjct: 117 AGTGGDEAAIFAGDLLRMYTRYAENQGWRVELQAESEGEHGGYKEVIARIIGQGAFSKMK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSAATVA++PE  E++  DI   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPETESQGRIHTSAATVAIMPEIDEVEAPDINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V + +E+SQH+NR RAM  L++++   ER + A E++A RK 
Sbjct: 237 VNKTDSAIRITHVPTGIVVESQAERSQHKNRARAMSQLQSKIIQGERDKQAQEQAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G ++ +I+PL++ +QA  + + 
Sbjct: 297 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDDVMGGGLEQVIDPLVSEYQADQLAAL 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|295697770|ref|YP_003591008.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912]
 gi|295413372|gb|ADG07864.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912]
          Length = 355

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 163/351 (46%), Positives = 234/351 (66%), Gaps = 5/351 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ ++  R+ +   +    KL   ++E A +   +     Y Q     ++  
Sbjct: 3   DKLQAIEERYEDLGRRLCDPDVLADPEKLRTYSKEQADLEETVQTYREYKQVVSALREAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D E+R+  + E+ A+     ELE ++  LLLP+D +DDK+ I+EIR   GG 
Sbjct: 63  EMF-EERLDEEMREWVKSEIAALGHRREELEAKLQILLLPRDPNDDKNVIVEIRGAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DLFRMY RYA  + W+VE++ S   D GG+KE+V ++ GRG +SR+KFESG H
Sbjct: 122 EASLFAADLFRMYTRYAERQGWRVEMIDSHPTDLGGFKEVVFSVQGRGAYSRLKFESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAV+PE  E++V+I  +D+RIDT  ++G GGQ VNTT SA
Sbjct: 182 RVQRVPTTESGGRIHTSTATVAVMPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    EKSQ +NR +AM+VLRARLY+  R+    E +  RK  +G+GDR
Sbjct: 242 VRITHLPTGIVVSCQDEKSQLKNREKAMRVLRARLYEKYRREQQEELAQTRKSLVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           SERIRTYNF Q R+TDHRI LTL++L+ VL G +D+II+ L+ A + + + 
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTLHRLDAVLDGDLDEIIHALIAADRVEKLS 352


>gi|161526057|ref|YP_001581069.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|189349228|ref|YP_001944856.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|238687082|sp|A9AJ68|RF1_BURM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160343486|gb|ABX16572.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|189333250|dbj|BAG42320.1| peptide chain release factor RF-1 [Burkholderia multivorans ATCC
           17616]
          Length = 360

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 256/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D  +RD A+ E+ +  + +  LE E+  +LLPKD +DD++  +EIR
Sbjct: 61  DETAAQELLA----DPSMRDFAEEEIRSARERMARLEVELQKMLLPKDPNDDRNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I L D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINLADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|75503325|sp|Q4ZXW7|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63254909|gb|AAY36005.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 360

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++  +   + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|167587636|ref|ZP_02380024.1| peptide chain release factor 1 [Burkholderia ubonensis Bu]
          Length = 360

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q   
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELDPVVGQYALWRQSLS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++G    D+ +RD A+ E+ +    + +LE E+  +LLPKD +DD++  LEIR
Sbjct: 61  DEAAAQELLG----DASMRDFAEDEIRSARDRMVQLEVELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L++ HQA+ + S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIAALVSEHQAEQLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|149204050|ref|ZP_01881018.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
 gi|149142492|gb|EDM30537.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
          Length = 417

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 190/354 (53%), Positives = 247/354 (69%), Gaps = 6/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E +M +        +L  EY+ + P++ +I  Y     +    
Sbjct: 70  MIPLDRLQQIVERFDYVEAQMMQGGG--DIARLGREYSELRPVVEEIRAYRLAVNDLDGA 127

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+RDLA+ EV  +E  + E+E  +   LLP+D  D +  ILEIR GTGG
Sbjct: 128 RAMLA----DPEMRDLAREEVAVLEARLPEMEQRLQLALLPRDEADARPAILEIRPGTGG 183

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL RMY+RY+  R W  EV+    ++ GG +E+V  I G GVF+R+KFESGV
Sbjct: 184 EEAALFGADLMRMYQRYSEARGWSFEVIEEQQSELGGIRELVVRIGGEGVFARLKFESGV 243

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 244 HRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQINANDLRIDTMRSSGAGGQHVNTTDS 303

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VL+ RLYD+ER R+ +ERSANR  Q+GSGDR
Sbjct: 304 AVRITHLPTGIVVTSSEKSQHRNREIAMQVLKTRLYDLERNRVDSERSANRAAQVGSGDR 363

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLYKLE VL G +D++I+ L    QA ++   S
Sbjct: 364 SERIRTYNFPQGRMTDHRINLTLYKLEQVLGGDLDEVIDALTADAQASLLAEMS 417


>gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 360

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++  +   + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV    +++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|326389251|ref|ZP_08210819.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994614|gb|EGD53038.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 356

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 173/356 (48%), Positives = 254/356 (71%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ E+  ++S+   +   + + K  +E+AAI  I+ K   Y +  ++ + 
Sbjct: 1   MIDKLQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++   ++D E++++A+ E+  +E++  +L  EI  LL+PKD +D+K+ I+EIRAG G
Sbjct: 61  TKELLS--SNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  + WKVE++SS++ D GG+KE++  ISG+G +SR+K+ESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+HTS ATVAVLPE  E+DV+I   DI++D  R+ G GGQ VNTTD
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIKVDVFRSGGHGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    E+SQ QNR RA+K+LRA+LY++  +    E +  RK Q+G+G
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKSQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSERIRTYNF QGR+TDHRI LTLY+L+ VL G +D+II+ L+   QA+ + + +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNMN 354


>gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|298485681|ref|ZP_07003760.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|119361578|sp|Q48MV4|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 360

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++      + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYQQLIRVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 360

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++  +   + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|312795903|ref|YP_004028825.1| peptide Chain Release Factor 1 (RF-1) [Burkholderia rhizoxinica HKI
           454]
 gi|312167678|emb|CBW74681.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Burkholderia
           rhizoxinica HKI 454]
          Length = 365

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +S       +D Y KLT E+A ++P++ + + +   + 
Sbjct: 6   MKPSMQAKLEQLTKRLPELNELLSREDVTSDLDQYRKLTREHAELAPVVEQYAQWKTARN 65

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++    +D  +RD A+ E+      + +LE ++  +LLPKD +D+++  +EIR
Sbjct: 66  DEATAQELL----TDPSMRDFAEDELNTARSRMEQLERDLQKMLLPKDPNDERNIFVEIR 121

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA   +W+VE++S S +D GGYKE++  I G+G +SR+K
Sbjct: 122 AGTGGDESALFAGDLLRMYLRYAERHRWQVEMMSESASDLGGYKEVIVRIIGQGAYSRLK 181

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI ++++   D+RIDT RASG+GGQH
Sbjct: 182 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEIELNPADLRIDTFRASGAGGQH 241

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+V    ++SQH+N+ RAMKVL AR+ D + +    + +A RK 
Sbjct: 242 INKTDSAVRITHLPTGIVVECQDDRSQHKNKDRAMKVLAARIKDKQYQEQHAKEAATRKS 301

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRIN+TLYKLE ++ G +D +I+ L++ HQA+++ + 
Sbjct: 302 LVGSGDRSERIRTYNFPQGRLTDHRINVTLYKLEQMMDGDLDALIDALVSEHQAELLAAM 361

Query: 356 SE 357
            E
Sbjct: 362 GE 363


>gi|330502033|ref|YP_004378902.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
 gi|328916319|gb|AEB57150.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
          Length = 360

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +RF E+   + ++  +     +   ++EYA I P+I+      + + 
Sbjct: 1   MKASLLNKLDNLSDRFEELTALLGDAEVISKQSQFRAYSKEYAEIEPVIATFRELRKVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A++EV   ++ +  LE+++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDLREMAELEVDQAKEALVGLEDKLQRMLLPKDPNDGRNVYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VEVLS+++ + GG+KE++A + G  V++++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTG +V    E+SQH+NR +AM  L A+L D +      E S  RKL
Sbjct: 239 VNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQDAAAHKEISETRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY L  V+ G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLNEVIAGGVEAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|261493250|ref|ZP_05989777.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496507|ref|ZP_05992887.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261307710|gb|EEY09033.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261311100|gb|EEY12276.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 360

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++  +   D +   ++EY+ +  ++   + + +   
Sbjct: 1   MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++D+A  E+   + EI  LE  +  LLLPKD +D+ +  LEIR
Sbjct: 61  DIEEAQLLL----DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RY   ++W++E +S+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           S+
Sbjct: 357 SD 358


>gi|328473485|gb|EGF44333.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329]
          Length = 362

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q + 
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLAAAEEMAKE--DDEEMREMAQEEIKDAKEAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++EV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E++R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVVQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|221639323|ref|YP_002525585.1| peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
 gi|254790895|sp|B9KST8|RF1_RHOSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221160104|gb|ACM01084.1| Peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
          Length = 351

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 190/354 (53%), Positives = 251/354 (70%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E R+S   +      L+ EYA + P++ +IS Y    ++  + 
Sbjct: 1   MVPMDRLLQIVRRFEFLEARLSAGAAPAEIAALSREYAELKPVVVEISAYRTALEDLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD E+R LA+ E+ A+   I  +E  +   LLPKD  D +  ILEIR GTGG
Sbjct: 61  EAML----SDPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  + W+ E+L  + ++ GG +E  A + G G F+R+K+ESGV
Sbjct: 117 EEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GR+HTSAATVAVLPEA E+D++IP  D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAADLRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VLRARLYD+ER+R+A+ RSA+RK Q+GSGDR
Sbjct: 237 AVRITHLPTGIIVTSSEKSQHRNREIAMQVLRARLYDLERQRLADARSADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY L  ++ G + ++I+ L    QA  +    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQAARLAEME 350


>gi|319404588|emb|CBI78194.1| peptide chain release factor 1 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 359

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 222/355 (62%), Positives = 287/355 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  L+ RF  IE +M+E+P+ + Y+KL  EYA + PII+ I   +   +E  
Sbjct: 1   MVSLPQDRMKQLEKRFKIIESQMAENPNAETYVKLASEYAELQPIIAPIRTLNSLHKEIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L T+I D  +D+E+R+LAQ E+ ++ ++I+ELE E+  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  ELETIISDTQTDTEMRNLAQEELSSLSQKIQELEQELQILLLPKDIADEKSVIIEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF G+LFRMYERYA    WKVE++S SD + GGYKEI+ATISG+GVFS++KFES
Sbjct: 121 GGSEAALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATISGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE  GR+HTSAATVAVLPEA EID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+ER++  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKTQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ++++IN L++ HQ  ++   
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQTTLLTEM 355


>gi|300853434|ref|YP_003778418.1| peptide chain release factor 1 [Clostridium ljungdahlii DSM 13528]
 gi|300433549|gb|ADK13316.1| peptide chain release factor 1 (RF-1) [Clostridium ljungdahlii DSM
           13528]
          Length = 357

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 174/356 (48%), Positives = 248/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+ +++S+   +     + KL +E A +  I++K   Y + +QE +D
Sbjct: 1   MLERLNFIENKYEELSIKISDPQVMADQKEWQKLCKENAELEEIVTKYREYKKAQQELED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D E++++ Q E+  + + I E EN++  LLLPKD +DDK+  +EIRAG G
Sbjct: 61  NKEMLKEE-TDREMKEMEQEEIKRLTEVIEESENDLRVLLLPKDPNDDKNVFVEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA  + W +E +S +  D GG+KEIV  + G+G +SR+K+ESG
Sbjct: 120 GEEAALFAANLTRMYTRYAERQAWNIETMSINATDIGGFKEIVFMVKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+SGR+HTS ATVAVLPE  ++DV I   DIRID  RASG GGQ VNTTD
Sbjct: 180 THRVQRVPDTESSGRIHTSTATVAVLPEVDDVDVVINPNDIRIDVFRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ + MKVL++RLY+   K  +   + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKGMKVLKSRLYERAEKERSASIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+TDHRI LTLYKL+  L G ID+II+ L+TA QA+ +    
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLYKLDSFLDGNIDEIIDALITADQAEKMKEMG 355


>gi|17547620|ref|NP_521022.1| peptide chain release factor 1 [Ralstonia solanacearum GMI1000]
 gi|20139328|sp|Q8XVD0|RF1_RALSO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|17429924|emb|CAD16608.1| probable peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum GMI1000]
          Length = 360

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 245/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  EI   ++      ++D Y KLT E+A + P++++ + + Q + 
Sbjct: 1   MKPSMLSKLDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAED 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D +++  A+ E+ A  + +  LE E+  LLLPKD +D ++  LEIR
Sbjct: 61  DVTTAQELLA----DPDMKAFAEDEIRAARERMTTLEAELQRLLLPKDPNDHRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  + G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA    D+ I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK 
Sbjct: 237 INKTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGRITDHRINLTLYK++ ++ G + +++  L   HQA+ + + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRITDHRINLTLYKIDALMDGDLGELLGALAAEHQAEQLAAL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|224827212|ref|ZP_03700307.1| peptide chain release factor 1 [Lutiella nitroferrum 2002]
 gi|224600605|gb|EEG06793.1| peptide chain release factor 1 [Lutiella nitroferrum 2002]
          Length = 358

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 244/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++       +DA+ KLT E+A ++P++     Y Q + 
Sbjct: 1   MKPSIATKLSQLADRLEEVTHLLASEAATRDMDAFRKLTREHAELTPVVETYQAYRQCES 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++++ AQ E+   ++ +  L+ E+  LLLPKD +D+K+  LEIR
Sbjct: 61  DLATATEMLA----DPDMKEFAQAEIDEGKERMASLDVELQKLLLPKDPNDEKNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY R+A   +W+ E++SSS++D GGYKE++  + G G FSR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRLVGFGAFSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI   +    D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+      +SQH N+  AM+VL AR+YD++ +      +A RK 
Sbjct: 237 INKTDSAVRITHLPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLRAQQQSVAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGRITDHRINLTLYKL+ V+ G + ++ + L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRITDHRINLTLYKLDQVMDGDLFELTDALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|77463465|ref|YP_352969.1| peptide chain release factor 1 [Rhodobacter sphaeroides 2.4.1]
 gi|119361594|sp|Q3J2B6|RF1_RHOS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77387883|gb|ABA79068.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides 2.4.1]
          Length = 351

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 191/354 (53%), Positives = 251/354 (70%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E R+S   +      L+ EYA + P++ +IS Y    ++  + 
Sbjct: 1   MVPMDRLLQIVRRFEFLEARLSAGAAPAEIAALSREYAELKPVVVEISAYRTALEDLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD E+R LA+ E+ A+   I  +E  +   LLPKD  D +  ILEIR GTGG
Sbjct: 61  EAML----SDPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  + W+ E+L  + ++ GG +E  A + G G F+R+K+ESGV
Sbjct: 117 EEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GR+HTSAATVAVLPEA E+D++IP  DIRIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VLRARLYD+ER+R+A+ RSA+RK Q+GSGDR
Sbjct: 237 AVRITHLPTGIIVTSSEKSQHRNREIAMQVLRARLYDLERQRLADARSADRKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY L  ++ G + ++I+ L    QA  +    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQAARLAEME 350


>gi|52425247|ref|YP_088384.1| peptide chain release factor 1 [Mannheimia succiniciproducens
           MBEL55E]
 gi|61214602|sp|Q65TB1|RF1_MANSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52307299|gb|AAU37799.1| PrfA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 360

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E+E  + ++  +   D +   ++EY+ +  ++   S + Q   
Sbjct: 1   MKPSIISKLDSLNERYEELEALLGDASVISDQDKFRAYSKEYSQLEEVVKTFSRWKQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + E+ E+E  +  LLLP+D +D+ +  LEIR
Sbjct: 61  NIEEAELLL----DDPEMKEMAQMEIEESKNELEEVEQHLQILLLPRDPNDEYNAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA +++W+VEVLS ++++ GGYKEI+A +SG  V+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAEMKRWRVEVLSENESEQGGYKEIIALVSGDNVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG++V    E+SQH+N+ +A+ VL +RL   E+ ++A E++  R+ 
Sbjct: 237 INKTDSAVRITHIPTGMVVECQDERSQHKNKAKALAVLASRLVQAEQDKLAAEQATTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           S+
Sbjct: 357 SD 358


>gi|269961569|ref|ZP_06175931.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
 gi|269833610|gb|EEZ87707.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
          Length = 362

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  + +    Y Q + 
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTNCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLIAAEDMANE--DDEEMREMAQEEIKEAKDAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++EV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E++R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVVQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|312877228|ref|ZP_07737197.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796037|gb|EFR12397.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 355

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 247/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+E ++++   +     + KL +E++ + PI+ K   Y +     ++
Sbjct: 1   MIEKLQVIEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D +   L + E+   +++   +E ++  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  AEELL-DTDLDEDFEKLVKEELNHAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA  + WKVEV+S+S++D  G+KE++  ISG+G +SR+K+ESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPE  +++V+I  ED+ IDT RA G+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H PTGI+V    E+SQH NR RAMK+LRARLYD  +     E  + R+ Q+G+G
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTLYKLE VL G +D+II+ L+T  Q + +    
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGELDEIIDALITHFQTERLKEVG 355


>gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           642]
          Length = 360

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++  +   + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|302671177|ref|YP_003831137.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
           B316]
 gi|302395650|gb|ADL34555.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
           B316]
          Length = 357

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 246/354 (69%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +I D+  +F +I + +++   +     + KL +E   + P++   + Y + K+   +  
Sbjct: 3   DKIEDILRKFEDITMELNDPSVIADQERFRKLMKEQKNLEPLVECYNEYKKCKETIDESL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E++++ + E+   + +I ELE+++  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  AML-DEESDPEMKEMLKDELQTAKDKIPELEDKLKILLLPKDPNDDKNVIVEIRAGVGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  D++R+Y RYA  + W+VE +S  D   GG K +   I G G +SR+KFESGVH
Sbjct: 122 EAALFAADMYRVYTRYAERQNWRVETMSVEDIGIGGIKTVSFMIKGNGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE+ GR+HTSA TVA++PE  +++V+I + D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPATESGGRIHTSAITVAIMPEVEDVEVEIDMNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++    EKSQ QN+ +A++VLRA+LY++E+++  N  +  R+ Q+GSGDR
Sbjct: 242 VRLTHFPTGIVISCQDEKSQQQNKAKALRVLRAKLYELEQEKKHNNEAELRRSQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF QGR+TDHRI LTLYK++ ++ G ID+II+ L+ A QA+ +    
Sbjct: 302 SEKIRTYNFHQGRVTDHRIGLTLYKIDQIMDGDIDEIIDSLIAADQAEKLSKVE 355


>gi|146296536|ref|YP_001180307.1| peptide chain release factor 1 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166223538|sp|A4XJN1|RF1_CALS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145410112|gb|ABP67116.1| bacterial peptide chain release factor 1 (bRF-1)
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 355

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 175/356 (49%), Positives = 250/356 (70%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+E ++S+   ++    + KL +E++ + PI+ K   Y +  +  ++
Sbjct: 1   MIEKLQVIEEKYLELEKKISDPEIINNNQEWQKLMKEHSNLQPIVEKFREYKRIIKTIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D N D +   L + E+   +++   +E E+  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  AEELL-DTNLDEDFEKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA  + WKVEV+S+S++D  G+KE++  ISG+G +SR+K+ESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPE  +++V+I  ED+ I+T RA G+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIETFRAGGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH PTGI+V    E+SQH NR RAMK+LRARLYD  +     E  + R+ Q+G+G
Sbjct: 240 SAVRITHKPTGIVVSCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTLYKLE VL G +D+II+ L+T  Q + +    
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALITHFQTERLKEVG 355


>gi|126701107|ref|YP_001090004.1| peptide chain release factor 1 [Clostridium difficile 630]
 gi|254977108|ref|ZP_05273580.1| peptide chain release factor 1 [Clostridium difficile QCD-66c26]
 gi|255094436|ref|ZP_05323914.1| peptide chain release factor 1 [Clostridium difficile CIP 107932]
 gi|255102693|ref|ZP_05331670.1| peptide chain release factor 1 [Clostridium difficile QCD-63q42]
 gi|255308514|ref|ZP_05352685.1| peptide chain release factor 1 [Clostridium difficile ATCC 43255]
 gi|255316188|ref|ZP_05357771.1| peptide chain release factor 1 [Clostridium difficile QCD-76w55]
 gi|255518849|ref|ZP_05386525.1| peptide chain release factor 1 [Clostridium difficile QCD-97b34]
 gi|255652028|ref|ZP_05398930.1| peptide chain release factor 1 [Clostridium difficile QCD-37x79]
 gi|255657438|ref|ZP_05402847.1| peptide chain release factor 1 [Clostridium difficile QCD-23m63]
 gi|260685003|ref|YP_003216288.1| peptide chain release factor 1 [Clostridium difficile CD196]
 gi|260688661|ref|YP_003219795.1| peptide chain release factor 1 [Clostridium difficile R20291]
 gi|296449035|ref|ZP_06890825.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
 gi|296879858|ref|ZP_06903831.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
 gi|306521770|ref|ZP_07408117.1| peptide chain release factor 1 [Clostridium difficile QCD-32g58]
 gi|119361524|sp|Q180Y2|RF1_CLOD6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115252544|emb|CAJ70387.1| Peptide chain release factor 1 (RF-1) [Clostridium difficile]
 gi|260211166|emb|CBA66621.1| peptide chain release factor 1 [Clostridium difficile CD196]
 gi|260214678|emb|CBE07314.1| peptide chain release factor 1 [Clostridium difficile R20291]
 gi|296262128|gb|EFH08933.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
 gi|296429147|gb|EFH15021.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
          Length = 354

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 175/354 (49%), Positives = 251/354 (70%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             K++  L++ + ++  ++ +   ++    + K  +E+A + PI+ K   Y       ++
Sbjct: 1   MLKKLEVLEDTYKDLSEKIGDPDVINDQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E+R+LA++E+  +E+++  LE EI  LLLPKD +DDK+ I+EIR G G
Sbjct: 61  SKEILQEE-SDEELRELAKMELAEMEEKVAPLEEEIKILLLPKDPNDDKNVIVEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  R+WK+E+LS+SD   GGYKE+   I G+G +SR+K+ESG
Sbjct: 120 GDEAALFAGDLFRMYSRYAERRRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P+TE+ GR+HTS +TVAVLPE  +++V+I   D+RID  R+SG+GGQ VNTTD
Sbjct: 180 VHRVQRIPSTESGGRIHTSTSTVAVLPEVEDVEVEINPNDLRIDVFRSSGNGGQSVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG +V     KSQ +N+ +A+K+L+ARLYD        + +A RK Q+G+G
Sbjct: 240 SAVRVTHIPTGEVVSCQDGKSQLKNKEQALKILKARLYDKALAEQHKDIAAERKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGRI+DHRINLTLYKL+  L G ID++I+ L+T  Q + + +
Sbjct: 300 DRSERIRTYNFPQGRISDHRINLTLYKLDAFLDGDIDEMIDALITVDQTEKMTA 353


>gi|28897517|ref|NP_797122.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153840439|ref|ZP_01993106.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|260364112|ref|ZP_05776832.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
 gi|260897557|ref|ZP_05906053.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|260903527|ref|ZP_05911922.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|31076863|sp|Q87RN4|RF1_VIBPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28805729|dbj|BAC59006.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149745897|gb|EDM57027.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|308086350|gb|EFO36045.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|308110855|gb|EFO48395.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|308114221|gb|EFO51761.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
          Length = 362

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q + 
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLAAAEEMAKE--DDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++EV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E++R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVVQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|237748574|ref|ZP_04579054.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
 gi|229379936|gb|EEO30027.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
          Length = 360

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L NR  EI+  + +       D Y KL++E+A + P+++  + Y Q + 
Sbjct: 1   MKPSMLAKLEQLANRLTEIDELLMQPDVASDQDNYRKLSKEHAELGPVVALYNDYVQVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+++ AQ E+ A E ++  +E+++  +LLPKD +DDK+  LEIR
Sbjct: 61  DVDAAQEMLA----DPEMKEFAQEEISAAEGKMTAIEDDLQLMLLPKDPNDDKNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL RMY R+A   +WKVE++S+S+++ GGY+E++  + G  V+SR+K
Sbjct: 117 AGTGGDESALFAADLLRMYSRFAEKNRWKVEIVSASESELGGYREVIVRLIGNDVYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAV+PEA +  DV I   DIRIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITH PTGI+V    ++SQH+N+ +AM+VL AR+ D + +    + +A RK 
Sbjct: 237 INKTDSAIRITHFPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTLYKLE+++ G +D+++N L   H+A+++   
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLYKLEFIMDGDMDELVNALAAEHRAELLAEM 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
 gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
          Length = 356

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 177/353 (50%), Positives = 254/353 (71%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ +F ++E  +++       D Y KLT+ ++ + P++     Y + KQ   D   
Sbjct: 4   KLESLERKFLDLEQELADPTVFNDQDRYRKLTKAHSDLKPVVDIFRQYRELKQNLADNQE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D +IR++A  E+ +IE+++ ELE+++  LLLP D  D+K+ ILEIRAGTGG E
Sbjct: 64  LLNDA--DPDIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA    WKVE++S S++D+GGYKE++A ISG  V+SR+KFESG HR
Sbjct: 122 AALFGGDLFRMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSAATVA++PEA E+D+D+  ED+R D  R+SG GGQ VNTTDSAV
Sbjct: 182 VQRVPATESQGRIHTSAATVAIMPEAEEVDLDLKPEDLRFDVYRSSGPGGQSVNTTDSAV 241

Query: 245 RITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG++V   + KSQH+N+ + +K+L +RL  +++       +  R+ Q+G+GDRS
Sbjct: 242 RVTHIPTGLVVCCQDEKSQHKNKAKGLKILCSRLLQMKQDEQNAALADQRRAQVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF QGR+TDHRINLTLY L  VL+G I ++++ L+T  Q + + + +
Sbjct: 302 ERIRTYNFPQGRVTDHRINLTLYSLGKVLEGEIQELVDALVTHAQTEALKAQA 354


>gi|240950074|ref|ZP_04754376.1| peptide chain release factor 1 [Actinobacillus minor NM305]
 gi|240295449|gb|EER46204.1| peptide chain release factor 1 [Actinobacillus minor NM305]
          Length = 360

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++  ++    +   ++EYA +  ++S  + + +   
Sbjct: 1   MKDSIINKLESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++D+A  E+   + EI +LE  +  LLLPKD +D+ +C LEIR
Sbjct: 61  DIEEAQILL----DDPDMKDMAAEEIEENKAEIEQLEQNLQILLLPKDPNDEYNCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RYA  ++W++E LS+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE+++ A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           S+
Sbjct: 357 SD 358


>gi|119361546|sp|Q4QKS1|RF1_HAEI8 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 257/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 1   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 61  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W VE+LS+++++ GGYKE++  +SG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|182677881|ref|YP_001832027.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|238691232|sp|B2IHL7|RF1_BEII9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182633764|gb|ACB94538.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 358

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 186/356 (52%), Positives = 255/356 (71%), Gaps = 2/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L   ++  +  R  EI  R++E+P    ++ L+ E A +  +   I  Y  +  E   +
Sbjct: 1   MLPQDKLDLILRRHEEISARLTENPDAATFVSLSRELAGLDEVAQAIRAYRDEMTEISGM 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D  ++ E+  LA+ E+    + +   E  +   LLPKD DD+KS ILEIRAGTGG
Sbjct: 61  EAMLADPATEPELLALAEEELQDARQRLGAFEQHLRIALLPKDADDEKSAILEIRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYA  + W VE+LS S+   GGYKEIVA I+G+GVF+++KFESG 
Sbjct: 121 DEAALFAGDLFRMYQRYAEAKGWGVEILSVSEGTAGGYKEIVAEITGKGVFAKLKFESGT 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAATVAVLP+A E+DV+I   D++IDTMRA G+GGQHVN T+S
Sbjct: 181 HRVQRVPDTETQGRIHTSAATVAVLPQAEEVDVEINEADLKIDTMRAQGAGGQHVNKTES 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITH+PTG ++    E+SQH+NR RAM +LR+R+YD +R+++  ER+A+RK Q+GSGD
Sbjct: 241 AIRITHLPTGTVIFVQDERSQHKNRARAMSLLRSRIYDAKRQQLEAERAADRKAQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLTLYKL+ V+ G  +D++I+ L+T +QA  + ++ 
Sbjct: 301 RSERIRTYNFPQGRLTDHRINLTLYKLDKVMTGEALDEVIDALITDYQAAQLAASE 356


>gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 360

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++  +   + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
 gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
          Length = 361

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   +S+   +   + +  L+ EYA I P++     Y Q   
Sbjct: 1   MKASLQGKLDKLADRFEELAGLLSDPDVIGNQNQFRDLSREYAEIDPVVKCYQAYLQAAD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  +    +SD ++R++   E    +  + EL  E+  L+LPKD  D  +  LE+R
Sbjct: 61  NLDAARAM--QDDSDPDMREMGAEEARDAQARMEELAEELQKLMLPKDPRDGANVFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  R WKVE++S+S+ + GGYKE++A + G GV+SRMK
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVA++ EA +  D+ I  ED+RIDT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG++V    E+SQH+N+ RAM +L A+LYD ++     E++A RK 
Sbjct: 239 VNTTDSAVRITHLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR++DHRINLTLY+L  +++G +D+++  LL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVSDHRINLTLYRLGELMEGDMDELLGALLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
 gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
          Length = 364

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 252/355 (70%), Gaps = 7/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L +R  EI   + +   +   + +  L++EY+ +  +++    Y++ ++  +   
Sbjct: 8   EKLQGLVDRHEEISALLGDPDVIGDQNKFRDLSKEYSQLEEVVNTFQRYEEAEESLKAAE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D ++R++AQ E+   + +I  LE E+  LLLP+D +DDK+  LEIRAGTGG 
Sbjct: 68  EMLKDE--DPDMREMAQEELKDAKGQIELLEVEMQKLLLPRDPNDDKNTFLEIRAGTGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +YA  ++W+VEV+S SD + GGYKEI+  ISG  V+S +KFESG H
Sbjct: 126 EAAIFAGDLFRMYSKYAEKKRWQVEVISQSDGEHGGYKEIIVRISGDSVYSHLKFESGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TE+ GR+HTSA TVAV+PEA E   ++I   D++IDT RASG+GGQHVN TDS
Sbjct: 186 RVQRVPETESQGRIHTSACTVAVMPEADELDAIEINPADLKIDTFRASGAGGQHVNKTDS 245

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITH+PTG++V    E+SQH+N+ +AM VL+ARL   E+ +  +E++  R+  +G+GD
Sbjct: 246 AIRITHLPTGVVVECQDERSQHKNKAKAMSVLQARLTAAEQAKAQSEQTEMRRNLVGTGD 305

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RS+RIRTYNF QGR+TDHRINLTLYKL+ +++G ID I+ PL+  HQA  + + S
Sbjct: 306 RSDRIRTYNFPQGRMTDHRINLTLYKLDEIMEGDIDQIVGPLIQEHQADQLAALS 360


>gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5]
 gi|119361580|sp|Q4K695|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5]
          Length = 360

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 249/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   ++EYA + PI++      + + 
Sbjct: 1   MKASLLSKLDILQDRFEELTALLGDAEVISDQAKFRAYSKEYAEVEPIVATYKQVLKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  +D ++R++A  EV   ++++ ELE+ +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--NDPDLREMAAEEVREAKEQLAELESSLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W++E+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGESVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAVLPE  E + ++I   D+RIDT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIP+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY L+ +L G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLDEILAGGVEAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|312793258|ref|YP_004026181.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180398|gb|ADQ40568.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 355

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 247/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+E ++++   +     + KL +E++ + PI+ K   Y +     ++
Sbjct: 1   MIEKLQVIEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D +   L + E+   +++   +E ++  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  AEELL-DTDLDEDFEKLVKEELNQAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA  + WKVEV+S+S++D  G+KE++  ISG+G +SR+K+ESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPE  +++V+I  ED+ IDT RA G+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H PTGI+V    E+SQH NR RAMK+LRARLYD  +     E  + R+ Q+G+G
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTLYKLE VL G +D+II+ L+T  Q + +    
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGELDEIIDALITHFQTERLKEVG 355


>gi|293602161|ref|ZP_06684612.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
           43553]
 gi|292819431|gb|EFF78461.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
           43553]
          Length = 356

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 168/358 (46%), Positives = 246/358 (68%), Gaps = 9/358 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L NR  E++  +++      +D + KL+ E A + P++   + + + +++   
Sbjct: 1   MRSRLEHLCNRLTEVDALLAQPETASDMDRFRKLSRERAELEPVVEAFTAFARTEEDLAT 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    SD +++ +A+ E+     ++  LE+ +  LLLP+D +D +S  LEIRAGTG
Sbjct: 61  AQEML----SDPDMKAMAEDEIKTGRVKLESLESALQLLLLPRDPNDGRSVFLEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E+ALF GDL RMY RYA  R W+VE++S S ++ GGYKE++A I G G + R+KFESG
Sbjct: 117 GDESALFSGDLLRMYTRYAETRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTT 240
            HRVQRVPATEA GR+HTSA TVAV+ EA E+    I   D+RIDT RASG+GGQH+N T
Sbjct: 177 AHRVQRVPATEAQGRIHTSACTVAVMAEADEMSEIVINANDLRIDTFRASGAGGQHINKT 236

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V    ++SQH+N+ +AM+VL ARL D E +   ++ +A RK  IG+
Sbjct: 237 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQSKEAAERKSLIGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ++++   L+  HQA+ + +  +
Sbjct: 297 GDRSERIRTYNFPQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQAEQLAALGD 354


>gi|260914191|ref|ZP_05920664.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
 gi|260631824|gb|EEX50002.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
          Length = 360

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R  E+E  + ++  +     +   ++EYA +  ++   + ++Q   
Sbjct: 1   MKPSIISKLDSLKERHEELEALLGDASVISDQEKFRAYSKEYAQLEDVVKCFARWNQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D  ++++AQ E+   + E+ ++E ++  LLLPKD +D+ +C LEIR
Sbjct: 61  NIEEAQLLL----DDLSMKEMAQEEIEECKAELEQVEQQLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W++EVLS+++++ GGYKEI+  +SG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAEGKRWRIEVLSANESEQGGYKEIIVKVSGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+   E++R   +++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIVQAEKERQEQQQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16]
 gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16]
          Length = 356

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 175/355 (49%), Positives = 248/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E+   ++   +   +D Y KL+ E+A +SP+  +   Y Q + +      
Sbjct: 4   KLDQLAERLDEVNALLAREDATAKIDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQA 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++D A  E+ +    +  LE  +  LLLPKD +DD++ +LEIRAGTGG E
Sbjct: 64  LL----DDPEMKDFAADEIASARARLEGLEASLQRLLLPKDPNDDRNLLLEIRAGTGGEE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +ALF GDL RMY RYA  ++W+VEV+S S +D GGYKE++  I+G   FSR+KFESG HR
Sbjct: 120 SALFAGDLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIVRIAGDAAFSRLKFESGGHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATEA GR+HTSA TVAV+PEA E+ +V+I   D+RIDT RASG+GGQHVN TDSA
Sbjct: 180 VQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSA 239

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    ++SQH+N+ +AMKVL AR+ D++ +    + ++ R+  IGSGDR
Sbjct: 240 VRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQAKEASTRRNLIGSGDR 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D++++ L + HQA  + +  E
Sbjct: 300 SDRIRTYNFPQGRVTDHRINLTLYKIDMIMDGDMDELLSALASEHQADQLAALGE 354


>gi|91228927|ref|ZP_01262825.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269965455|ref|ZP_06179574.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
 gi|91187510|gb|EAS73844.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269829934|gb|EEZ84164.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
          Length = 362

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L+ EY+ +  +      Y Q ++
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSREYSQLEEVTKCFQAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMANE--DDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++EV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E +R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|325267755|ref|ZP_08134406.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
           33394]
 gi|324980879|gb|EGC16540.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
           33394]
          Length = 358

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 250/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +R  E+   +        +D Y +L +E+A ++PI+     Y Q + 
Sbjct: 1   MKPSILDKLQNLAHRLEEVTALLGSPEATSDMDNYRRLNQEHAELTPIVETYRAYTQAES 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++    SD E++D A  E+ A + +I  L+  +  LLLPKD DDDK+  +EIR
Sbjct: 61  DLAEAQEML----SDPEMKDFAAEEIEAAKAKIEMLDLALQKLLLPKDADDDKNIFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+ E++S++++D GGYKE++  + G G +S++K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQTEIVSANESDLGGYKEVIVRLVGLGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E   +++  +D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +A+KVL ARL D++++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLNDMQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I   L+  HQA+ + + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMEEITAALMAEHQAEQLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 358

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 175/354 (49%), Positives = 253/354 (71%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ DL+ ++ E+E ++S+   +       +L +E++ +S ++ K   Y Q ++  ++  
Sbjct: 6   EKLDDLERKYQELETKLSDPDVISNPAVLQRLAKEHSEMSKVVEKYREYRQAQKRLEEA- 64

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +      D ++R+LA+ E   ++  + ELE E+  LLLPKD +D++S I+EIRAG GG 
Sbjct: 65  -LALTEEDDEDLRELAREEANQLKNIVEELEEELALLLLPKDPNDERSVIVEIRAGAGGE 123

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DL+RMY RYA  ++WKVE+L++++   GGYKEIV  + G+  +S +K+ESGVH
Sbjct: 124 EAALFAADLYRMYVRYAERKRWKVELLTANETGIGGYKEIVFRVEGQDAYSVLKYESGVH 183

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEASGR+HTS ATVAVLPE  E+DV+I  ED++IDT RASG+GGQ+VN TDSA
Sbjct: 184 RVQRVPVTEASGRIHTSTATVAVLPEPDEVDVEIRPEDLKIDTFRASGAGGQYVNMTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V    E+SQ +NR +AM++LRA+LYD+E +R     ++ R+ QIGSGDR
Sbjct: 244 VRITHIPTGIVVTCQDERSQLKNRAKAMQLLRAKLYDMEIRRQQEAMASERRGQIGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL+ L+ +L+G +D+++  L TA Q + +    
Sbjct: 304 SERIRTYNFPQNRVTDHRIGLTLHNLDEILEGDLDELLYALATADQMEKLKLLG 357


>gi|145632952|ref|ZP_01788685.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
 gi|144986608|gb|EDJ93174.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
          Length = 361

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 259/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + ++  +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  +SG GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 298 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLAAL 357

Query: 356 SE 357
           SE
Sbjct: 358 SE 359


>gi|254230550|ref|ZP_04923918.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262394972|ref|YP_003286826.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|151936922|gb|EDN55812.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262338566|gb|ACY52361.1| peptide chain release factor 1 [Vibrio sp. Ex25]
          Length = 362

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L+ EY+ +  +      Y Q ++
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSREYSQLEEVTKCFQAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMANE--DDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++EV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E +R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 360

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++  +   + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|239996062|ref|ZP_04716586.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126]
          Length = 361

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 256/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  RF E++  + +   +   D +  L++E++ +  +++  + Y Q ++
Sbjct: 1   MKESVVRKLEHLVERFEEVQALLGDPGVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  ++ +   D+E+R++AQ E+   + EI  LE E+  LLLPKD +DD +C LEIR
Sbjct: 61  NLASAQEMLNE--DDAEMREMAQEEMKDAKAEIERLETELQVLLLPKDPNDDNNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  R W+VE++++++ + GGYKE++A +SG GV+  +K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   ++RIDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM VL+ARL  +E ++ A E ++ RK 
Sbjct: 239 VNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLT+Y+L+ V++G +  +I+P+L  HQA ++ S 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTIYRLDEVVEGDLKQLIDPILQEHQADLLASL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|315924395|ref|ZP_07920617.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622274|gb|EFV02233.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 364

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 179/356 (50%), Positives = 247/356 (69%), Gaps = 4/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L+ ++ ++   +S+   +    K   L +E+A + PII K   Y +  Q   D
Sbjct: 9   MLEKLDFLEEKYQKLNQEISDPAVIADQAKWQDLMKEHAHMEPIIQKYKAYREADQAIAD 68

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D E + + + E+     ++  LE E+  LLLPKD +D+++ I+EIRAG G
Sbjct: 69  SKEMLADKSIDPEFKAMCEDELAEQTAQLATLEEELKILLLPKDPNDERNVIVEIRAGAG 128

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  + WK+E+LSS+  D GG KEI   I G+G +SR+K+ESG
Sbjct: 129 GDEAALFAGDLFRMYSRYAERQSWKIEILSSNILDLGGIKEINFAIQGQGAYSRLKYESG 188

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPEA +++VD+   DIR+D  R+SG+GGQ VNTTD
Sbjct: 189 VHRVQRVPETESGGRIHTSTATVAVLPEADDVEVDLNPNDIRVDVYRSSGNGGQCVNTTD 248

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIP+G++V    EKSQ +N+ +AMKVL+ARLYD+E ++  +  S  RK Q+G+G
Sbjct: 249 SAVRLTHIPSGLVVTCQDEKSQIKNKAKAMKVLKARLYDLEMQKQQSAISEERKSQVGTG 308

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGRITDHRI  T+++LE  L G ID++IN L+T  QAK +  A 
Sbjct: 309 DRSERIRTYNFPQGRITDHRIGQTVHQLEAFLDGEIDEMINALITTDQAKKLEQAG 364


>gi|238026092|ref|YP_002910323.1| peptide chain release factor 1 [Burkholderia glumae BGR1]
 gi|237875286|gb|ACR27619.1| Peptide chain release factor 1 [Burkholderia glumae BGR1]
          Length = 360

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 250/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R AE+   +S       +D Y KLT E+A I P++ + + +   + 
Sbjct: 1   MKTSMQSKLDQLSSRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEQYAQWRLARG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +R+ A+ E+    + +  LE E+  +LLPKD +DD++  +EIR
Sbjct: 61  DEAAAQELLA----DASMREFAEEEIREARERMARLEAELQTMLLPKDPNDDRNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESGSDLGGYKEVIVRIAGHGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +        +A RK 
Sbjct: 237 INKTDSAVRITHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAREAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L + HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIASLASEHQAELLASL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|167855820|ref|ZP_02478572.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219871001|ref|YP_002475376.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
 gi|254790883|sp|B8F526|RF1_HAEPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167853033|gb|EDS24295.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219691205|gb|ACL32428.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
          Length = 360

 Score =  292 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++  +    K    ++EY+ +  ++S  + + +   
Sbjct: 1   MKASIINKLDSLSERHEELQALLGDATIISDQEKFCAYSKEYSQLEEVVSTFNRWKKLHS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++++A  E+ A + EI +LE  +  LLLPKD +D+ +C LEIR
Sbjct: 61  DIEEAQILL----DDPDMKEIAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RYA  ++W++E LS+++++ GGYKEI+  ISG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYAESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+  VE+++ A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           S+
Sbjct: 357 SD 358


>gi|89070966|ref|ZP_01158192.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516]
 gi|89043473|gb|EAR49687.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516]
          Length = 351

 Score =  292 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 183/354 (51%), Positives = 250/354 (70%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            + +  +  +  R   +E RM+E       I +  EY+ + P++  I+ Y     E ++ 
Sbjct: 1   MIPNDTLDQIVARQQYLEARMAEGAPGAEMIAIAREYSDLKPVVETIARYRALTAELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ +     E+R LA+ E+  +++ + E E  +   LLP+D  D +  ++EIR GTGG
Sbjct: 61  QAMLAE----PEMRGLAEEEIARLKEALPEAEQALRLALLPRDAADARPAMIEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL RMY+RYA  + W  E++     + GG +E+ A ++G GVF+R+KFESGV
Sbjct: 117 EEAALFAADLLRMYQRYADAKGWSFEIIDEQATELGGIRELTARVAGDGVFARLKFESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEAA++D+DI   DIRIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAADVDIDIAPADIRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM+VL+ RL+D+ER+R ++ERSA RK Q+GSGDR
Sbjct: 237 AVRITHLPTGLVVTSSEKSQHRNREIAMQVLKTRLFDMERQRASDERSAARKAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY+LE +L G +D+ I+ L+   QA+ +    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYRLEEILGGDLDETIDALIAETQARQLAEME 350


>gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 357

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 170/358 (47%), Positives = 244/358 (68%), Gaps = 6/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
               K++ ++++ F +IE RM++     +V     L+  ++ + P++     Y +  +  
Sbjct: 1   MDFLKKLEEIESAFQDIESRMADPEISNNVQEMQSLSRRHSELYPVVQAFREYRKVMRSL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++   ++     D E+R LA+ EV  +   +  LE ++  LLLP+D +D K+ I+EIRAG
Sbjct: 61  EEAQELL--EQDDEEMRQLAKEEVQRLSDMLPGLEQDLKVLLLPRDPNDHKNVIIEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF  DLFRMY RY   + W+ E++  ++   GGYKE+V  + G G +S++KFE
Sbjct: 119 AGGDEAALFAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQR+P TEASGR+HTS ATVAVLPEA ++DV I  ED++IDT RASG+GGQ+VN 
Sbjct: 179 SGVHRVQRIPVTEASGRIHTSTATVAVLPEAEDVDVQIRPEDLKIDTYRASGAGGQYVNM 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIPTG++V    E+SQ +NR +AM++LRARLYD E ++   + +A RK Q+G
Sbjct: 239 TDSAVRITHIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDQELQKQQAQMAAERKGQVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYN+ Q R+TDHRI  TLYKL+ VL G + ++I  L  A QA+ + + +
Sbjct: 299 TGDRSERIRTYNYPQNRLTDHRIGFTLYKLDQVLDGDLYELIEALRVADQAEKLKTLA 356


>gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
 gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
          Length = 360

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EYA + P+ +    + + + 
Sbjct: 1   MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++  LE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W++E+LS ++ + GGYKEI+A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPE  E   ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR RAM  L A+L D++     N  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|254465069|ref|ZP_05078480.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
 gi|206685977|gb|EDZ46459.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
          Length = 351

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 186/355 (52%), Positives = 257/355 (72%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  +E  M++         L +EY+ + P+  +++ Y + + + ++ 
Sbjct: 1   MVPEERLEQILQRFQYLEAAMADGAGGGDIAALAKEYSDLRPVAEQVAAYRKLQSDLREA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D ++++LA  E+ A++  I E E+ +   LLPKD  D +  +LEIR GTGG
Sbjct: 61  ELMLA----DPDMKELAAEEIPALKAAIPEAEHALQLALLPKDAADSRPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  + WK +++     + GG KE+VA I G  VF+R+K+ESGV
Sbjct: 117 DEAALFAGDLLRMYQRYAEGQGWKFDIIEEQMTELGGIKEVVAHIKGDNVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTSAATVAVLPEA ++D+ I   DIRIDTMRASG+GGQHVNTTDS
Sbjct: 177 HRVQRVPATESGGRIHTSAATVAVLPEAEDVDIHIDANDIRIDTMRASGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+VTSSEKSQH+NR  AM+VL+ RLYD+ER+R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHLPTGIIVTSSEKSQHRNREIAMQVLKTRLYDLERQRIDSERSADRASQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D+II+ L   +QA+++    +
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYKLDQVMGGDLDEIIDALTADNQARLLAEMGQ 351


>gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691540|sp|B2SFF6|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 361

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 257/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+   LLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|134294603|ref|YP_001118338.1| peptide chain release factor 1 [Burkholderia vietnamiensis G4]
 gi|166223537|sp|A4JB50|RF1_BURVG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134137760|gb|ABO53503.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           vietnamiensis G4]
          Length = 360

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSVRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+  + +  + +  LE E+  +LLPKD +DD++  LEIR
Sbjct: 61  DEAAAQELLA----DASMRDFAEEAIRSARERMTRLEGELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEALMDGDLDELIGALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|237745909|ref|ZP_04576389.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
 gi|229377260|gb|EEO27351.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
          Length = 360

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R AEI+  + +   V     Y KL  E+A ++P+++    + Q +Q
Sbjct: 1   MKPSMLAKLEHLSDRLAEIDELLMQPEVVSDQENYRKLNREHAELAPVVALYRDFSQVRQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+++ AQ E+   EK+I  +E E+  +LLPKD DD K+  LEIR
Sbjct: 61  DIDTAREMLA----DPEMKEFAQQEIDGAEKKIAGIEEELQLMLLPKDPDDGKNIYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A   +WK E++S+S ++ GGY+E++  + G+ V+SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRFAEKNRWKAEIVSASMSELGGYREVIVRLVGKDVYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAV+PEA +  DV I   DIR+DT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRVDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+V    ++SQH+N+ +AM+VL AR+ D + +    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQEQQAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTLYKLE+++ G +D++++ L+  H+A ++   
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLYKLEFIMDGDMDELVSALVAEHRAGLLAEL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|206890162|ref|YP_002248216.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|238054474|sp|B5YIQ7|RF1_THEYD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206742100|gb|ACI21157.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 353

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 183/355 (51%), Positives = 257/355 (72%), Gaps = 6/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ +++N++ +I   +S+       D Y+K + E A + PI++K   Y +  ++ ++
Sbjct: 1   MLEKLMEVENKYEKITQTLSDPKVFSNKDEYMKYSREQAELEPIVTKFREYKRILKQIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I   + D ++++LA+ E+  ++K   ++E E+  LLLPKD  D+K+ ILEIRAGTG
Sbjct: 61  AEEMIK--SGDPDLKELAEEELQQLKKIKPQIEQELKVLLLPKDPRDEKNVILEIRAGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY +YA  + WKVE++ S     GG+KEI+ATISG+G FS++K+ESG
Sbjct: 119 GEEAALFAANLFRMYAKYAESKGWKVEIIDSHPTGLGGFKEIIATISGKGAFSKLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TEASGR+HTS ATVAVLPEA E+D+ I  +D+RIDT  +SG GGQ VNT  
Sbjct: 179 VHRVQRIPVTEASGRIHTSTATVAVLPEAEEVDIKIDEKDLRIDTFCSSGPGGQSVNTAY 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI HIPTGI+V    E+SQ +NR +AMKVLRARL ++ER++   ER+A RK Q+G+G
Sbjct: 239 SAVRIVHIPTGIIVQCQDERSQIKNREKAMKVLRARLLEIERQKKEAERAAERKGQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +RSERIRTYNF Q R+TDHRI LTLYKLE VL G ID+II+ L++ +QA+ +   
Sbjct: 299 ERSERIRTYNFPQNRVTDHRIGLTLYKLEQVLNGNIDEIIDALISYYQAEKLKEM 353


>gi|68249924|ref|YP_249036.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
 gi|68058123|gb|AAX88376.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
          Length = 361

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 257/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W VE+LS+++++ GGYKE++  +SG GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 298 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLAAL 357

Query: 356 SE 357
           SE
Sbjct: 358 SE 359


>gi|226942019|ref|YP_002797093.1| PrfA [Laribacter hongkongensis HLHK9]
 gi|254790885|sp|C1D5R7|RF1_LARHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226716946|gb|ACO76084.1| PrfA [Laribacter hongkongensis HLHK9]
          Length = 359

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 173/361 (47%), Positives = 251/361 (69%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   + +      +DAY +LT E+A ++P++ +   + Q + 
Sbjct: 1   MKPSILTKLAQLSDRLDEVTGLLGDPDVTRDMDAYRRLTREHAELTPVVEQYLAWRQTEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++++LA+ E+   ++ +  LE E+  LLLPKD +D+++  LE+R
Sbjct: 61  DLASARDLL----DDPDMKELAEAELSDGQERLAVLELELQKLLLPKDPNDERNIFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  DLFRMY RYA   +W+VE++S+S+ND GG+KE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAADLFRMYSRYAERNRWQVEIVSASENDLGGFKEVIARIVGFGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA E   V++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADELAAVELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+ VL AR+ DV+++    + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKARALAVLAARIQDVQQRARQQKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+L+ V+ G + ++ + L   HQA+++   
Sbjct: 297 LIGSGDRSERIRTYNFPQGRVTDHRINLTLYRLDAVMDGDLAELTDALTAEHQAELLAQL 356

Query: 356 S 356
           +
Sbjct: 357 A 357


>gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549]
          Length = 361

 Score =  292 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 258/362 (71%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+  LLLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|156973549|ref|YP_001444456.1| peptide chain release factor 1 [Vibrio harveyi ATCC BAA-1116]
 gi|166223617|sp|A7MY68|RF1_VIBHB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156525143|gb|ABU70229.1| hypothetical protein VIBHAR_01250 [Vibrio harveyi ATCC BAA-1116]
          Length = 362

 Score =  292 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q + 
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLAAAEDMANE--DDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++EV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E +R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVVQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|110680314|ref|YP_683321.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
 gi|119361597|sp|Q164F8|RF1_ROSDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109456430|gb|ABG32635.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
          Length = 351

 Score =  292 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 189/355 (53%), Positives = 256/355 (72%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E  M+          L +EY+ + P++ +IS Y Q   + +D 
Sbjct: 1   MIPLDRLRQITERFQYLEAAMAAGDGAADIAALAKEYSDLRPVVEQISAYQQLLSDLEDA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++G    D ++  LA+ E+  ++  + + E  +   LLPKD  D K  +LEIR GTGG
Sbjct: 61  AEMLG----DPDMAPLAEEEIPRLKSALPQAEAALQLALLPKDKADAKPAMLEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYA  + WKV+++   + + GG KE+VA I G  VF+R+K+ESGV
Sbjct: 117 DEAALFAGDLFRMYQRYAETQGWKVDLIELQETELGGIKEVVAHIKGADVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP+TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMR+SG+GGQHVNTTDS
Sbjct: 177 HRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTG++VTSSEKSQH+NR  AM+VL+ARLYD+ER R+ +ERSA+R  Q+GSGDR
Sbjct: 237 AVRITHLPTGLVVTSSEKSQHRNREIAMQVLKARLYDLERSRVDDERSADRAAQVGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLY+L+ VLQG +D+II+ L    QA+++    +
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYRLDAVLQGDLDEIIDALTAHAQAQLMADMGQ 351


>gi|61252075|sp|P43917|RF1_HAEIN RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  292 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 1   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 61  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  ++G GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|328542097|ref|YP_004302206.1| peptide chain release factor 1 [polymorphum gilvum SL003B-26A1]
 gi|326411847|gb|ADZ68910.1| Peptide chain release factor 1 [Polymorphum gilvum SL003B-26A1]
          Length = 357

 Score =  292 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 192/356 (53%), Positives = 267/356 (75%), Gaps = 2/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L+  ++  L  RFAEIE RMS +P    Y++L+ EY+ + P+++++    + + E  D 
Sbjct: 1   MLAQAKLDTLLARFAEIEHRMSSNPDAATYVRLSREYSDLEPLVARVRALRRAEAELADA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D   D ++ +LA+ E  A+   +  L  E+   LLPKD+ D    ILE+RAGTGG
Sbjct: 61  EALLEDSVGDPDMAELAEAEREALAARVEALTQEVRIGLLPKDSADTNDAILEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYA L+ WKVE+LS+S+ + GG+KE++A++SG  VF+R+KFESGV
Sbjct: 121 DEAALFAGDLFRMYQRYADLKGWKVEILSASEGEMGGFKEVIASVSGENVFARLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLP+A ++D+D+   D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESGGRIHTSAATVAVLPQAEDVDIDVHDSDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQH+N+ +AM++LRA++YD ER++ A+ER+  R+LQ+GSGD
Sbjct: 241 AVRITHLPTGIVVAVQDERSQHKNKAKAMQLLRAKIYDAEREKAASERTEARRLQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRI LTLYKL+ V+ G  +D++I+ L   HQA ++ +  
Sbjct: 301 RSERIRTYNFPQGRVTDHRIGLTLYKLDQVISGEALDEVIDALTMDHQASLLAAEE 356


>gi|312134918|ref|YP_004002256.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
 gi|311774969|gb|ADQ04456.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
          Length = 355

 Score =  292 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 173/354 (48%), Positives = 247/354 (69%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+E ++++   +     + KL +E++ + PI+ K   Y +     ++
Sbjct: 1   MIEKLQVIEEKYLELEKKIADPDIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D +   L + E+   +++   +E ++  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  AEELL-DTDIDEDFEKLVKEELNWAKEQKEIVERDLKILLLPKDPNDEKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA  + WKVEV+S+S++D  G+KE++  ISG+G +SR+K+ESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPE  +I+V+I  ED+ IDT RA G+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDIEVEIREEDLEIDTFRAGGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H PTGI+V    E+SQH NR RAMK+LRARLYD  +     E  + R+ Q+G+G
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGR+TDHRI LTLYKLE VL G +D+II+ L+T  Q + +  
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGELDEIIDALITHFQTERLKE 353


>gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1]
          Length = 360

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EYA + P+ +    + + + 
Sbjct: 1   MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++  LE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W++E+LS ++ + GGYKEI+A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPE  E   ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR RAM  L A+L D++     N  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|134301001|ref|YP_001114497.1| peptide chain release factor 1 [Desulfotomaculum reducens MI-1]
 gi|134053701|gb|ABO51672.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfotomaculum
           reducens MI-1]
          Length = 356

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 250/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L++RF ++E ++S+   +     + +L + ++ ++ ++     Y + K++ Q+  
Sbjct: 3   DKLQALEDRFEQLESQISDPEVMADRAKWQQLVKSHSDLAEVVDVFRQYKKAKEDLQENK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   + + R++ ++E+  +  +I E EN++  LLLPKD +DDK+ I+EIR GTGG 
Sbjct: 63  QMLEDK-LEPDFREMVELEIEELTSKIEEQENKLKILLLPKDPNDDKNVIMEIRGGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA  + W+ E++ +++ D GG+KE+   I G+G FS +KFESGVH
Sbjct: 122 EAALFAGDLFRMYSRYAEKKGWRTEIIDANETDLGGFKEVTFVIEGKGAFSTLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTSAATVAVLPEA E+D+DI   DIRID   ASG GGQ VNTT SA
Sbjct: 182 RVQRVPATESGGRIHTSAATVAVLPEAEEVDIDINANDIRIDLFCASGPGGQCVNTTQSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG +V    EKSQH+N+ +AM+VLRARL D  +       +  RK  +GSGDR
Sbjct: 242 VRITHIPTGTVVSCQDEKSQHKNKDKAMRVLRARLLDKAQDEQQKAIAGARKSMVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF Q RITDHRI LTL++LEYVLQG +D++I+ L+T  QA+ + +  E
Sbjct: 302 SERIRTYNFPQNRITDHRIGLTLHRLEYVLQGDLDELIDALITTDQAERLKAVEE 356


>gi|254520297|ref|ZP_05132353.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
 gi|226914046|gb|EEH99247.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
          Length = 361

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 171/357 (47%), Positives = 246/357 (68%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N++ E+ +++S+   +   + + KL +E+A +  I++    Y     +  
Sbjct: 1   MLLDKLAFIENKYDELSVKISDPSIMANQNEWRKLCKEHADLEVIVTAYKEYRTVIDDLA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++ +  SD E+R++   E+  +     ELE  I  LLLPKD +DDK+  +EIR G 
Sbjct: 61  ANKEMLAEE-SDREMREMLSEEISDLTAREGELEKHIQILLLPKDPNDDKNVFVEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMY RYA  ++W VE++S+++ D GG+KE+V  I G G +S++K+ES
Sbjct: 120 GGDEAALFAANLFRMYTRYAETQRWSVELMSANETDIGGFKEVVFMIKGSGAYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTS ATVAVLPE  +++++I  +D+RID  R+SG+GGQ VNTT
Sbjct: 180 GVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINEKDLRIDVYRSSGNGGQCVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTG++V    EKSQ +N+ +AMKVLR+RLY+          + +RK Q+GS
Sbjct: 240 DSAVRITHIPTGVVVACQDEKSQLKNKEKAMKVLRSRLYEAAEAERNAGIAEDRKSQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRI LTLYKLE  L G I+++IN L+TA QA+ +    
Sbjct: 300 GDRSERIRTYNYPQGRVTDHRIGLTLYKLESYLNGDIEEVINALITADQAEKMKKMG 356


>gi|253997606|ref|YP_003049670.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
 gi|253984285|gb|ACT49143.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
          Length = 360

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 245/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L  R  EI+  MS      ++D Y KLT E+A I+PI+ +   ++Q + 
Sbjct: 1   MKPSMITKLANLSERLDEIDRLMSSEGITDNMDNYRKLTREHAEITPIVEQYRAFEQTEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +  T++    +D E++  AQ E+ A + ++  +E  +  LLLPKD +DDK+  LEIR
Sbjct: 61  DINEAQTML----NDPEMKAFAQEEIEAGKAKLEAIEAALQTLLLPKDPNDDKNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ LF GDL+RMY RYA  + WKVEV+S+++ + GGYKEI+A I G G +S++K
Sbjct: 117 AGTGGDESGLFAGDLYRMYSRYAERQGWKVEVMSANEGEMGGYKEIIAKIEGYGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVA+LPEA E+   +    D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPDTETQGRIHTSACTVAILPEADEVSDVVINPADVRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH PTGI+V     +SQH N+ +A  VL AR+   +     ++ ++ RK 
Sbjct: 237 INKTDSAVRLTHAPTGIVVECQEGRSQHANKAQAFAVLAARIKAKQVDEQQSKIASERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGRITDHRINLTLYK++ + +G +D++I  L   HQA ++ S 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELIGALAAEHQADLLASL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
          Length = 361

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 258/362 (71%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+  LLLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANETIEKLESELQILLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|323702617|ref|ZP_08114279.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532436|gb|EGB22313.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM
           574]
          Length = 356

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 247/353 (69%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+++F ++E ++S+   +    K   L + +A ++ ++     Y + + + ++   
Sbjct: 4   KLQALEDKFEQLEGQISDPEIIADQAKWKQLVKAHADLTEVVDVFRQYKKVRSDLEESKL 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   + + R++ ++E+  + K   ELE ++  LLLPKD +D+K+ I+EIR GTGG E
Sbjct: 64  ML-EEKLEPDFREMVELEIEELSKRKEELEQKLKILLLPKDPNDEKNVIVEIRGGTGGEE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY R+A  + W+ E++ +++ D GG+KEI   + G+G +S +KFESGVHR
Sbjct: 123 AALFAGDLFRMYSRFAERKGWRTEIIDANETDLGGFKEITFVVEGKGAYSTLKFESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSAATVAVLPEA E+D++I   DIRID   ASG GGQ VNTT SAV
Sbjct: 183 VQRVPATESGGRIHTSAATVAVLPEAEEVDIEINPNDIRIDLFCASGPGGQCVNTTQSAV 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    EKSQH+N+ +AM+VLRARL D  ++      ++ RK  +G+GDRS
Sbjct: 243 RITHIPTGIVVSCQDEKSQHKNKDKAMRVLRARLLDKAQQEQQQAIASTRKSMVGTGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q R+TDHRI LTL++L+ VL+G +D+II  L+T  QA+ + +  
Sbjct: 303 ERIRTYNFPQNRVTDHRIGLTLHRLDQVLEGDLDEIIEALITTDQAERLKAVE 355


>gi|329904245|ref|ZP_08273720.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548069|gb|EGF32798.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 360

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 244/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   +++      +D Y KLT E+A + P++     +   + 
Sbjct: 1   MKPSMLVKLDQLADRLGELNELLTQEDLASDMDNYRKLTREHAELGPLVELYDSFRVAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +    H ++     D +++D AQ E+LA      ++E ++  +LLPKD +D+++  LEIR
Sbjct: 61  DIATAHDMLA----DPDMKDFAQEEILAARARTEQIEADLQTMLLPKDPNDERNLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA   +W+VE++S S +D GGYKE++  + G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYAERNRWQVEMVSESSSDVGGYKEVIVRVIGNGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAV+PE  EI   DI   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPTTETQGRIHTSACTVAVMPEVDEISDVDINPSDLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+V    ++SQH+N+  A+KVL AR+ D + +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHLPTGIVVECQDDRSQHKNKASALKVLAARIKDAQVREQQSKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL++++ G ++D+   L   HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLNDLTGALAAEHQAELLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|251792741|ref|YP_003007467.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
 gi|247534134|gb|ACS97380.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 259/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + ++  +   D +   ++EY+ +  ++   + ++Q   
Sbjct: 1   MKPSIITKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   E E+ E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 61  NLEEAKILL----DDPEMKEMAQMEIEESEAELTEVEQQLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA L++W+VEVLS ++++ GG+KEI+A +SG GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAELKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG++V    E+SQH+N+ +A+ VL +RL   E+ ++A E++  R+ 
Sbjct: 237 INKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQDKLAQEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLATL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG]
 gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG]
          Length = 361

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 258/362 (71%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+  LLLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|121602027|ref|YP_988678.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
 gi|166223530|sp|A1URS5|RF1_BARBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120614204|gb|ABM44805.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
          Length = 359

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 220/357 (61%), Positives = 286/357 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV LS  ++  ++ RF  IE +M+++P+ + Y+KL  EYA +  I++ I   +   +E  
Sbjct: 1   MVSLSQDRMKQIEKRFEIIESQMAQNPNAETYVKLASEYAELQQIVTPIRTLNALYKEVT 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +      D+++  LAQ E++ + ++I +LE EI  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  ELEAMANTTQIDADMYALAQEELVLLRQKIEQLEQEIQILLLPKDIADEKSAIIEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYA   KWKVEV+S SD++ GGYKEI+ATISG+GVFS++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEIIATISGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE SGR+HTSAATVAVLPEA EID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LR+RL+D+ER++  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRSRLFDIERQKAESERSASRKTQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +++G +D++INPL++ HQ  ++   ++
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEGDLDELINPLISNHQTALLTEIND 357


>gi|312127875|ref|YP_003992749.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777894|gb|ADQ07380.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
          Length = 355

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 173/356 (48%), Positives = 248/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+E ++++   +     + KL +E++ + PI+ K   Y +     ++
Sbjct: 1   MIEKLQVIEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D +   L + E+   +++   +E ++  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  AEELL-DTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA  + WKVEV+S+S++D  G+KE++  ISG+G +SR+K+ESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPE  +++V+I  ED+ IDT RA G+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H PTGI+V    E+SQH NR RAMK+LRARLYD  +     E  + R+ Q+G+G
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTLYKLE VL G +D+II+ L+T  Q + +   S
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGELDEIIDALITHFQTERLKEVS 355


>gi|326423672|ref|NP_759262.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
 gi|32171537|sp|Q8DFF9|RF1_VIBVU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576703|sp|Q7MMY6|RF1_VIBVY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|319999027|gb|AAO08789.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
          Length = 362

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +    + Y Q ++
Sbjct: 1   MKASILTKLEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I +L  E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAKE--DDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY ++A  R W++EV+S+++ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA++PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|307942489|ref|ZP_07657838.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
 gi|307774310|gb|EFO33522.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
          Length = 359

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 192/356 (53%), Positives = 268/356 (75%), Gaps = 2/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L+ +++  L +RFAE+E +MS +P    Y+KL+ EY+ + P++ KI    + ++E  + 
Sbjct: 1   MLARQKLNTLLDRFAELEHQMSANPDPSTYVKLSREYSGLEPLVHKIRTLIKAEEELAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D ++D E+R+LA+ E   +   +  L  ++   LLPKD+ D    ILE+RAGTGG
Sbjct: 61  EAMLDDADTDPEMRELAEAERDELAASLETLTQDVRIGLLPKDSADANDAILEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+R+A L  WKVEVLS+S+ + GG+KE++A++SG  VF+R+KFESGV
Sbjct: 121 DEAALFAGDLFRMYQRFAELNGWKVEVLSASEGEVGGFKEVIASVSGENVFARLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTSAATVAVLP+A ++D++I   D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPATESGGRIHTSAATVAVLPQAEDVDIEINESDLRIDTFRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH PTGI+V    E+SQH+N+ RAM++LRAR+YD ER R A+ER+  R++Q+GSGD
Sbjct: 241 AVRITHEPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERARAASERTEARRVQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRI LTLYKLE ++ G  + +++  L+  +QA ++ +  
Sbjct: 301 RSERIRTYNFPQGRVTDHRIGLTLYKLEQIIAGEGLAEVVEALILDYQATLLAAEE 356


>gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009371|ref|ZP_02274302.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312095|ref|ZP_06802908.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|119361542|sp|Q2A1Q0|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361543|sp|Q0BKE8|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223558|sp|A7NE96|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223560|sp|A4IWC1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 361

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 257/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+   LLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|15602420|ref|NP_245492.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|13431785|sp|P57852|RF1_PASMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12720821|gb|AAK02639.1| PrfA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R  E+E  + E+  +   D +   ++EYA +  ++   + ++Q   
Sbjct: 1   MKPTIISKLESLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D  ++++AQ E+ A + EI ++E ++  LLLPKD +D+ +C LEIR
Sbjct: 61  NMEEAQLLL----DDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++WKVEVLS+++++ GGYKEI+  ++G GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R    ++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|207721782|ref|YP_002252220.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum MolK2]
 gi|206586946|emb|CAQ17530.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum MolK2]
          Length = 356

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 174/360 (48%), Positives = 247/360 (68%), Gaps = 11/360 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  L  R  EI   ++      ++D Y KLT E+A + P++++ +++ Q + + 
Sbjct: 1   MLS--KLDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVAQYAVWKQAENDV 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                ++     D +++  A+ E+      +  LE E+  LLLPKD +D ++  LEIRAG
Sbjct: 59  ATAQELLA----DPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAG 114

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++A + G G +SR+KFE
Sbjct: 115 TGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFE 174

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVN 238
           SG HRVQRVPATEA GR+HTSA TVAV+PEA    D+ I   D+RIDT RASG+GGQH+N
Sbjct: 175 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHIN 234

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRITH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK  I
Sbjct: 235 KTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLI 294

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D+++  L   HQA+ + +  E
Sbjct: 295 GSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQAEQLAALGE 354


>gi|152979102|ref|YP_001344731.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
 gi|150840825|gb|ABR74796.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
          Length = 374

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++  ++   K    ++EYA +  ++   + + +  Q
Sbjct: 15  MKDSIISKLDSLAERHEELQALLGDASVINDQDKFRTYSKEYAQLEEVVGAFTRWKKLNQ 74

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +D   ++    +D +++D+AQ E+   + EI +LE ++  LLLPKD  D+ +  LEIR
Sbjct: 75  DIEDAQLLL----NDPDMKDMAQEEIEQNKAEIEQLEQQLQILLLPKDPHDEYNAYLEIR 130

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W++E LS+++++ GGYKEI+  + G GV+ ++K
Sbjct: 131 AGTGGDEAGIFAGDLFRMYSRYAESKRWRIETLSANESEQGGYKEIIVKVIGEGVYGQLK 190

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D+RIDT R+SG+GGQH
Sbjct: 191 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPETELPEINPTDLRIDTYRSSGAGGQH 250

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E+++ A E++  R+ 
Sbjct: 251 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIAQAEQEKQAREQADTRRN 310

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 311 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 370

Query: 356 SE 357
           SE
Sbjct: 371 SE 372


>gi|222529063|ref|YP_002572945.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312622681|ref|YP_004024294.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254790859|sp|B9MR68|RF1_ANATD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222455910|gb|ACM60172.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312203148|gb|ADQ46475.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 355

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 247/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+E ++S+   +     + KL +E++ + PI+ K   Y +     ++
Sbjct: 1   MIEKLQVIEEKYLELEKKISDPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILDTIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D +   L + E+   +++   +E ++  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  AEELL-DTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA  + WKVEV+S+S++D  G+KE++  ISG+G +SR+K+ESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPE  +++V+I  ED+ IDT RA G+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H PTGI+V    E+SQH NR RAMK+LRARLYD  +     E  + R+ Q+G+G
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTLYKLE +L G +D+II+ L+T  Q + +    
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQILDGELDEIIDALITHFQTERLKEIG 355


>gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1]
 gi|166223590|sp|A5VYG5|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           putida F1]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EYA + P+ +    + + + 
Sbjct: 1   MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++  LE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W++E+LS ++ + GGYKEI+A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPE  E   ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR RAM  L A+L D++     N  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|260767753|ref|ZP_05876688.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|260617262|gb|EEX42446.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|315179416|gb|ADT86330.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218]
          Length = 362

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  I      Y Q + 
Sbjct: 1   MKASILVKLESLVERYEEVQHLLGDPAVIGDQDKFRALSKEYSQLEEITHCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+   + EI  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLSAAEEMAKE--DDAEMREMAQDEIKVAKAEIERLSDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  R W++EV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEVPEAEIPEIRTADLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E ++ A   S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAKAEEEKRAAAISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +++P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLSEVMEGDLQSLVDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456401|ref|ZP_03664874.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|61214577|sp|Q5NIA8|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361541|sp|Q14JR1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct]
 gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 361

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 257/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKKYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+   LLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida U112]
 gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
 gi|166223559|sp|A0Q844|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112]
 gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
          Length = 361

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 258/362 (71%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+  LLLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMLMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|33152002|ref|NP_873355.1| peptide chain release factor 1 [Haemophilus ducreyi 35000HP]
 gi|46576749|sp|Q7VMV9|RF1_HAEDU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33148224|gb|AAP95744.1| peptide chain release factor 1 (RF-1) [Haemophilus ducreyi 35000HP]
          Length = 360

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 160/362 (44%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++  +   D +   ++EYA +  +++  + + +   
Sbjct: 1   MKASIIHKLDCLSERHEELQALLGDASVIADQDKFRAYSKEYAQLEEVVATFNRWKKLNS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++     D +++++A  E+   + EI  LE  +  LLLPKD +D+ +  LEIR
Sbjct: 61  DIEEAELLL----DDPDMKEMATEEITQNKAEIECLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDL+RMY RYA  ++W++E +S+++++ GGYKEI+  ISG  V+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYAESKRWRIEEMSANESEQGGYKEIIVKISGESVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V    E+SQH+N+ +A+ VL +R+  VE++R A  ++  R+ 
Sbjct: 237 VNTTDSAVRITHLPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAMAQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 297 LLGTGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAAL 356

Query: 356 SE 357
           S+
Sbjct: 357 SD 358


>gi|207744458|ref|YP_002260850.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum IPO1609]
 gi|206595864|emb|CAQ62791.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum IPO1609]
          Length = 356

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 174/360 (48%), Positives = 247/360 (68%), Gaps = 11/360 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  L  R  EI   ++      ++D Y KLT E+A + P++++ +++ Q + + 
Sbjct: 1   MLS--KLDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAENDV 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                ++     D +++  A+ E+      +  LE E+  LLLPKD +D ++  LEIRAG
Sbjct: 59  ATAQELLA----DPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAG 114

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++A + G G +SR+KFE
Sbjct: 115 TGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFE 174

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVN 238
           SG HRVQRVPATEA GR+HTSA TVAV+PEA    D+ I   D+RIDT RASG+GGQH+N
Sbjct: 175 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHIN 234

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRITH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK  I
Sbjct: 235 KTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLI 294

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D+++  L   HQA+ + +  E
Sbjct: 295 GSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQAEQLAALGE 354


>gi|294669176|ref|ZP_06734256.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308808|gb|EFE50051.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 358

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  E+   +        +  Y KLT E+A I+P++     Y Q + 
Sbjct: 1   MKPTIIEKLQQLSDRLEEVTALLGSPEATSDMGNYRKLTREHAEITPVVETFHQYMQAQN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++    SD E++D A  E+ A + +I  L+ E+  LLLPKD DDDK+  +E+R
Sbjct: 61  DMAEAQEML----SDPEMKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA   +W+VE++S+++++ GGYKE++A I G G +SR+K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E  D+++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V     +SQH N+ +AMKVL ARL D +++    + +A RK 
Sbjct: 237 INKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMEEITNALIAEHQAELLAAM 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|284039842|ref|YP_003389772.1| peptide chain release factor 1 [Spirosoma linguale DSM 74]
 gi|283819135|gb|ADB40973.1| peptide chain release factor 1 [Spirosoma linguale DSM 74]
          Length = 357

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 158/356 (44%), Positives = 234/356 (65%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              Q+  ++ RF E+  ++ +  +V     ++KL++EY  +  I+ +   Y Q  +E  +
Sbjct: 1   MLDQLEAIRERFNEVAQQIVQPEAVSDQKRFMKLSKEYKDLEKIVVQYQAYQQLLEEIDN 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I     D + R++A+ E+  +      LE  +  +L+PKD +D K+ ILEIR GTG
Sbjct: 61  AKKIIA-TEKDEDFREMAKGELDELLPRRETLEETLKEMLMPKDPNDSKNVILEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GD+FRMY+R+     W++ ++  ++   GGYKEI+  I G  V+ ++KFESG
Sbjct: 120 GDEAAIFAGDIFRMYQRFCEKMGWRMSLVDFTEGTSGGYKEIITEIEGEDVYGKLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTSAA+VAVLPEA E+DV+I + DIR DT  +SG+GGQ VNTT 
Sbjct: 180 VHRVQRVPATETQGRIHTSAASVAVLPEAEEVDVEINMNDIRKDTFCSSGAGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++V    E+SQ +N  +A+ VLR+RLY++E ++  +  ++ RK  +GSG
Sbjct: 240 SAVRLTHIPTGLVVQCQDERSQLKNFDKALTVLRSRLYEIELQKHNDAIASQRKTMVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS++IRTYN+ Q R+TDHRI LT+Y L  V+ G I + I  L  A  A+ +   +
Sbjct: 300 DRSDKIRTYNYPQSRVTDHRIGLTVYNLPSVMDGGIGEFIEQLRIAENAERLKEGA 355


>gi|170746587|ref|YP_001752847.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
 gi|226739115|sp|B1M766|RF1_METRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170653109|gb|ACB22164.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
          Length = 361

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 180/359 (50%), Positives = 250/359 (69%), Gaps = 3/359 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M+    +++  +  R   +  +++      +  ++L+ E + + P+++ I  Y    +  
Sbjct: 1   MIPFPTERLDAILARHDIVTAQLASGEIDPETVVQLSRELSDLDPVVAAIRAYRAALENL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             +  +I +  +D E+R LA  E       +      +  LLLPKD  D+KS ILE+RAG
Sbjct: 61  AGVEALIDEPGTDPEMRALAAEEKPEALAALETAHRALQLLLLPKDAADEKSAILEVRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY +YA  + W+VEV+S S+   GG++E+VA + GRGVF+R+KFE
Sbjct: 121 TGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGFREVVAEVKGRGVFARLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE  GR+HTSAATVAVLPEA E+D+ +   D++IDTMRA G+GGQHVN 
Sbjct: 181 SGAHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDIHVNDADLKIDTMRAQGAGGQHVNK 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA+RITH+PTGI+V    E+SQH+NR RAM +LRARLY+ ER    + R+A+RK Q+G
Sbjct: 241 TESAIRITHLPTGIVVFVQEERSQHKNRARAMALLRARLYEAERNAKDSARAADRKAQVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHRINLTLYKLE V+ G  +D++++ L+T HQA+++ +  
Sbjct: 301 SGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGTALDEVVDALITEHQAELLAAEG 359


>gi|16273461|ref|NP_439710.1| peptide chain release factor 1 [Haemophilus influenzae Rd KW20]
 gi|145631803|ref|ZP_01787563.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145637543|ref|ZP_01793200.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145642039|ref|ZP_01797610.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|148826083|ref|YP_001290836.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229844233|ref|ZP_04464374.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|229847123|ref|ZP_04467228.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|260580342|ref|ZP_05848171.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260583304|ref|ZP_05851079.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|319897179|ref|YP_004135374.1| peptide chain release factor rf-1 [Haemophilus influenzae F3031]
 gi|1574404|gb|AAC23209.1| peptide chain release factor 1 (prfA) [Haemophilus influenzae Rd
           KW20]
 gi|144982593|gb|EDJ90143.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145269229|gb|EDK09175.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145273219|gb|EDK13094.1| peptide chain release factor 1 [Haemophilus influenzae 22.4-21]
 gi|148716243|gb|ABQ98453.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229809952|gb|EEP45673.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|229813227|gb|EEP48915.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|260093019|gb|EEW76953.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260093664|gb|EEW77577.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|301170298|emb|CBW29904.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810]
 gi|317432683|emb|CBY81046.1| peptide chain release factor RF-1 [Haemophilus influenzae F3031]
          Length = 361

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  ++G GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 298 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLAAL 357

Query: 356 SE 357
           SE
Sbjct: 358 SE 359


>gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1]
          Length = 361

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 258/362 (71%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+  LLLP+D +DD +  LEIR
Sbjct: 61  DKQTAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|329848654|ref|ZP_08263682.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
 gi|328843717|gb|EGF93286.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 189/357 (52%), Positives = 261/357 (73%), Gaps = 2/357 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  + +RF  IE RM  +      ++L++E+A I P+   +    + + +  
Sbjct: 1   MIHLPQAKLDQVMDRFRMIEARMESTTDGAEIVRLSKEHAEIKPVCDAVERLLKARNQVP 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +I     D ++  LA+ E+ A+++ + +LE  +  LL PKD D++ S ILE+RAGT
Sbjct: 61  ELEEMIAL--GDPDLAPLAEEELGALKESLPDLERGVALLLAPKDKDENASAILELRAGT 118

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY RYAA + WKVEV S S+ + GG+KEI+A+++G GVF ++KFES
Sbjct: 119 GGDEAALFAGDLFRMYSRYAAAQGWKVEVDSLSEGEAGGFKEIIASVTGEGVFGKLKFES 178

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEA GR+HTSAATVAVLPEA +++++I  +D+RIDT R+SG+GGQHVN T
Sbjct: 179 GVHRVQRVPATEAGGRIHTSAATVAVLPEAEDVEIEIHDKDLRIDTYRSSGAGGQHVNKT 238

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITH+PTGI+VTSSEKSQHQNR  AM+ L+AR+YD++R+ +   RS +RK Q+GSG
Sbjct: 239 DSAVRITHLPTGIVVTSSEKSQHQNRAIAMRNLKARMYDMQRQALDTARSDSRKSQVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYN+ QGR++DHRINLTLY L   ++G +  +IN L+   QA+ +    E
Sbjct: 299 DRSERIRTYNYPQGRVSDHRINLTLYNLPQFMEGDMGQMINALIAEDQAERLAQLEE 355


>gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440]
 gi|32171521|sp|Q88PW5|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440]
          Length = 360

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EYA + P+ +    + + + 
Sbjct: 1   MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++  LE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W++E+LS ++ + GGYKEI+A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPE  E   ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR RAM  L A+L D++     N  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNALASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424]
 gi|238692779|sp|B3R722|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG
           19424]
          Length = 360

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 248/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   ++      ++D Y KL+ E+A +SP+  + S Y Q + 
Sbjct: 1   MKASMLAKLDQLAERLDEVNALLAREDATANIDQYRKLSREHAELSPVAEQYSQYRQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E++D A  E+ A    +  L+  +  LLLPKD +DD++ +LEIR
Sbjct: 61  DLATAQALL----DDPEMKDFAADEIAAARDRLEALQASLQRLLLPKDPNDDRNLLLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL RMY RYA  ++W+VEV+S S++D GGYKE++  I+G   FSR+K
Sbjct: 117 AGTGGEESALFAADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAGDAAFSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PEA E+ +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+PTGI+V    ++SQH+N+ +AMKVL AR+ D++ +      ++ R+ 
Sbjct: 237 VNKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQAREASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D++++ L   HQA  + + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDMIMDGDMDELLSALSAEHQADQLAAL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 361

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 257/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+   LLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQR+PATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRIPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|300702903|ref|YP_003744504.1| peptide chain release factor rf-1 [Ralstonia solanacearum CFBP2957]
 gi|299070565|emb|CBJ41860.1| peptide chain release factor RF-1 [Ralstonia solanacearum CFBP2957]
          Length = 356

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 175/360 (48%), Positives = 248/360 (68%), Gaps = 11/360 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  L  R  EI   ++      ++D Y KLT E+A + P++++ + + Q + + 
Sbjct: 1   MLS--KLDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYATWKQAEDDV 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                ++     D +++  A+ E+ A  + +  LE E+  LLLPKD +D ++  LEIRAG
Sbjct: 59  ATAQELLA----DPDMKAFAEDELRAARERMTALEAELQRLLLPKDPNDHRNIFLEIRAG 114

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++A + G G +SR+KFE
Sbjct: 115 TGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFE 174

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVN 238
           SG HRVQRVPATEA GR+HTSA TVAV+PEA    D+ I   D+RIDT RASG+GGQH+N
Sbjct: 175 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHIN 234

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRITH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK  I
Sbjct: 235 KTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLI 294

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GSGDRS+RIRTYNF QGR+TDHRINLTLYK++ ++ G +D+++  L   HQA+ + +  E
Sbjct: 295 GSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQAEQLAALGE 354


>gi|150015294|ref|YP_001307548.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
           8052]
 gi|189039964|sp|A6LQG2|RF1_CLOB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149901759|gb|ABR32592.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
           8052]
          Length = 360

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 170/357 (47%), Positives = 250/357 (70%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N++ E+ +++S+   +   + + KL +E+A +  I++    Y +  ++ +
Sbjct: 1   MLLDKLEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEVIVNSYREYKKVVEDLK 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++    SD E+R++   E+  +     +LE EI  LLLPKD +DDK+  +EIR G 
Sbjct: 61  ANKEMLS-GESDKEMREMLNEEITDLTNREEQLETEIQILLLPKDPNDDKNVFVEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMY RYA  ++W VE++S ++ D GG+KE+V  I G G +S++K+ES
Sbjct: 120 GGEEAALFAYNLFRMYTRYAETQRWGVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTS ATVAVLPE  ++++++  +D+RID  RASG+GGQ VNTT
Sbjct: 180 GVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEVADKDVRIDVFRASGNGGQCVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V    EKSQ +N+ +AMKVL++RLY+   +  A   + +RK Q+G+
Sbjct: 240 DSAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEQAERERAQGIAEDRKSQVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGRITDHRI LTLYKL+  L G ID++IN L+TA QA+ +    
Sbjct: 300 GDRSERIRTYNYPQGRITDHRIGLTLYKLDTFLGGDIDEMINALITADQAEKMKLMG 356


>gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus sp. MC-1]
 gi|226739111|sp|A0LDT7|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus sp.
           MC-1]
          Length = 361

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 167/358 (46%), Positives = 251/358 (70%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
               +++  L +R AE+   +++  +V     +   ++E++ + P+++    +    Q+ 
Sbjct: 1   MAIEEKLESLTSRHAELSAHLADPTTVSDSKRFAAYSKEFSDLEPVVAAWQAHLAILQQL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   ++ +   D+E+R +A+ E   ++ ++ + +  ++ +LLPKD +DDK+ ILEIRAG
Sbjct: 61  AETDEMLAEAGDDAEMRQMAREERETLKNKLEQSQKHLHLMLLPKDPNDDKNVILEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALFV DLFRMY R+A ++ W++E+LSSS  D GGYKE++A + G+G +  +K+E
Sbjct: 121 TGGEEAALFVSDLFRMYGRFAEIKGWRIEMLSSSATDLGGYKELIAMVQGKGAYMGLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQR+P TE  GR+HTSA TVA+LPEA E+++ I  +D+RID  R+SG GGQ VNT
Sbjct: 181 SGVHRVQRIPVTETGGRIHTSAVTVAILPEADEVELHIEDKDLRIDVYRSSGPGGQSVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    EKSQH+N+ +AMKVL+ARL D +++   ++R+  RK Q+G
Sbjct: 241 TDSAVRITHLPTGLVVICQDEKSQHKNKAKAMKVLQARLLDAQQQAADSQRAEARKGQVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF Q R+TDHRINLTL+KL+ VLQG + ++++ L    QA  +    
Sbjct: 301 SGDRSERIRTYNFPQSRVTDHRINLTLHKLDQVLQGGLAEVVDALTAHDQASKLAHLG 358


>gi|319776412|ref|YP_004138900.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|329123576|ref|ZP_08252138.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
 gi|317451003|emb|CBY87233.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|327470318|gb|EGF15778.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
          Length = 361

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  ++G GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 298 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLAAL 357

Query: 356 SE 357
           SE
Sbjct: 358 SE 359


>gi|23100453|ref|NP_693920.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831]
 gi|32171555|sp|Q8EM60|RF1_OCEIH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22778686|dbj|BAC14954.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831]
          Length = 356

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 160/357 (44%), Positives = 237/357 (66%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L++R+ ++   +S+   ++   KL   ++E + +  ++     Y +  ++  D
Sbjct: 1   MLDRLQSLEDRYNKLNEMLSDPEVINDSKKLREYSKEQSGLEDVVQAYREYKEVTEQLND 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D E+ ++ + E+  +     ELE+ +  LLLPKD +DDK+  +EIR   G
Sbjct: 61  AKEMMEDKLDD-EMYEMVKAEIAELNGRKEELESSMKILLLPKDPNDDKNVFMEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY RYA  + WK++V+ +S    GGYKE++  I+G  V+S++K+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEHQGWKIDVMEASSTGVGGYKEVIFMINGSDVYSKLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E++V++  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEVEVHDKDIRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+V+   EKSQ +N+ +AMKVLRAR+YD  ++    E   NRK  +GSG
Sbjct: 240 SAVRLTHVPTGIVVSIQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDENRKSAVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF Q R+TDHRI LT+ KL+ ++QG +D+ I+ L+   Q   +    E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQIMQGKLDEFIDALVMEEQTNKLEQIGE 356


>gi|148826783|ref|YP_001291536.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
 gi|148718025|gb|ABQ99152.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
          Length = 361

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  +SG GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 298 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLAAL 357

Query: 356 SE 357
           SE
Sbjct: 358 SE 359


>gi|255525833|ref|ZP_05392762.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
 gi|255510476|gb|EET86787.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
          Length = 358

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 170/356 (47%), Positives = 244/356 (68%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+  ++S+   +     + KL +E+A +  ++ K   Y + ++E + 
Sbjct: 1   MLERLEFIENKYEELSAKISDPSIMADQKEWQKLCKEHAELETLVIKYRQYRKAEEELES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D  +D ++RD+ Q ++  +E  + E   E+  LLLPKD +DDK+  +EIR G G
Sbjct: 61  NKEMLKDE-TDKDMRDMIQEDIKELEASMDEARQELRILLLPKDPNDDKNVFVEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA  + WKVE +S +  D GG+KEIV  I G G +SR+K+ESG
Sbjct: 120 GEEAALFAANLTRMYTRYAERKGWKVETISLNATDIGGFKEIVFMIKGAGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D+ I   DIRID  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDLVINANDIRIDVFRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AMKVL++RL++      +   + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLFERAEAERSAGIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+TDHRI LTLYKL+  L G ID++I+ L+T  QA+ + +  
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLYKLDSYLDGDIDEVIDALITTDQAEKMKAMG 355


>gi|332993699|gb|AEF03754.1| peptide chain release factor 1 [Alteromonas sp. SN2]
          Length = 361

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 259/362 (71%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++ +L  RF E++  + +   +   D +  L++E++ +  ++   + Y Q ++
Sbjct: 1   MKDSVVRKLENLVERFEEVQALLGDPQVIGNQDKFRNLSKEFSQLESVVGGFNAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                + ++ +   D+E+R++AQ E+   + +I  LE E+  LLLPKD +DD +C LE+R
Sbjct: 61  NLDSANEMLKE--DDAEMREMAQEELKIAKADIERLETELQVLLLPKDPNDDSNCFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  + W+VE++++++ + GGYKE+VA ISG GV+  +K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAETKGWRVELINANEGEHGGYKEVVANISGDGVYGILK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E + +DI   D+RIDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPDTESQGRIHTSACTVAVLPEIPESEAIDINPADLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+G++V    E+SQH+NR +AM VL+ARL ++E ++ A E ++ RK 
Sbjct: 239 VNKTDSAIRITHLPSGLVVECQDERSQHKNRAKAMSVLQARLNNIEEEKRAAEEASTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLT+Y+L+ V++G +  +++P++  HQA ++ S 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTIYRLDEVIEGDLKQLLDPIMQEHQADLLASL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|37679115|ref|NP_933724.1| peptide chain release factor 1 [Vibrio vulnificus YJ016]
 gi|320157139|ref|YP_004189518.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
 gi|37197857|dbj|BAC93695.1| protein chain release factor A [Vibrio vulnificus YJ016]
 gi|319932451|gb|ADV87315.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
          Length = 363

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +    + Y Q ++
Sbjct: 2   MKASILTKLEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQE 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I +L  E+  LLLPKD +DD++C LEIR
Sbjct: 62  DLVAAEEMAKE--DDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY ++A  R W++EV+S+++ + GGYKE++A ++G G +  +K
Sbjct: 120 AGAGGDEAGIFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA++PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 180 FESGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 239

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 240 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAEVSDTRRN 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 300 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVIQEHQADQLAAL 359

Query: 356 SE 357
           +E
Sbjct: 360 AE 361


>gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4]
 gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4]
          Length = 360

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 248/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L  R  E+   +S       +D Y K++ E+A I+PI+ +   Y+Q + 
Sbjct: 1   MKPSMLKKLATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCEN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++ H ++     D E++  AQ E+ A +  + E+   +  LLLPKD +D+++  LEIR
Sbjct: 61  DLKEAHAMLA----DPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDLFRMY RYA  ++WKVEV+S+S+++ GGYKEI+A I G G +S++K
Sbjct: 117 AGTGGDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAVLPE  E  DV I   DIRIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH PTGI+V     +SQH N+ +AM+VL AR+   +     ++ ++ R+ 
Sbjct: 237 INKTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVNEQQSKIASERRS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGRITDHRINLTLYK++ + +G +D++IN L   HQA ++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELINALANEHQADLLATL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|20806672|ref|NP_621843.1| peptide chain release factor 1 [Thermoanaerobacter tengcongensis
           MB4]
 gi|22096035|sp|Q8RD98|RF1_THETN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|20515122|gb|AAM23447.1| Protein chain release factor A [Thermoanaerobacter tengcongensis
           MB4]
          Length = 356

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 254/355 (71%), Gaps = 6/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +++R+ E+  ++S+   +     + K  +E+AAI  I+ K   Y +  +E + 
Sbjct: 1   MIEKLQAIEDRYVELSQKISDPNVISNVEEWRKYVKEHAAIEDIVLKYREYKKVLEEIKA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++   + D E++++A+ E+  +E++  +L  EI  LLLPKD +D+K+ I+EIRAG G
Sbjct: 61  TEELLS--SQDEELKEMAEEELSQLEEKKEKLMEEIKILLLPKDPNDEKNVIMEIRAGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  + WKVE++S++  D GG+KE++ +ISG+G +SR+K+ESG
Sbjct: 119 GEEAALFAYDLFRMYTMYAEKKGWKVEIMSANKTDIGGFKEVIFSISGKGAYSRLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TEA GR+HTS ATVAVLPEA E+DV+I   DI+ID  R+SG GGQ VNTTD
Sbjct: 179 VHRVQRIPTTEAGGRIHTSTATVAVLPEAEEVDVEINPNDIKIDVFRSSGHGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    E+SQ QNR RA+K+LRA+LY++  K    E +  RK Q+G+G
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALKEQQREIAEARKSQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +RSERIRTYNF QGR+TDHRI LTLYKL+ VL G +D+II+ L+   QA+ + + 
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYKLQEVLDGELDEIIDALILNDQAEKLKNM 353


>gi|254419936|ref|ZP_05033660.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
 gi|196186113|gb|EDX81089.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
          Length = 355

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 186/353 (52%), Positives = 253/353 (71%), Gaps = 4/353 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++  + +RF E+E RM  +      ++L++E+A + P+   +    + + E  DL 
Sbjct: 3   LPQARLDQVLDRFHEVEARMGAATDGVEIVRLSKEHAELKPVADAVQGLARLRAEMADLE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +      D E+  +AQ E+  + + + ++E ++  LL P+D D++ S +LE+RAGTGG 
Sbjct: 63  VMAA----DPEMAAMAQDELRDLTERLPQMERDVALLLAPRDADENASAVLEVRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYAA R W++E+ S+++ D GGYKEI+AT++G GVF R+KFESGVH
Sbjct: 119 EAALFAGDLFRMYSRYAATRGWRIELDSATEGDAGGYKEIIATVTGDGVFGRLKFESGVH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSAATVAVLPE  +++++I  +DIRIDT RASGSGGQHVN TDSA
Sbjct: 179 RVQRVPTTEAGGRIHTSAATVAVLPEVEDVEIEILEKDIRIDTFRASGSGGQHVNKTDSA 238

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTGI+ TSSEKSQH NR +AMK LR RLYD++R+     R+ +RK Q+GSGDRS
Sbjct: 239 VRITHLPTGIVATSSEKSQHVNRDKAMKNLRVRLYDMQRQAKDLARADSRKSQVGSGDRS 298

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF QGR+TDHRI LTL+ L  +L+G +D ++N L+   QA  +    
Sbjct: 299 ERIRTYNFPQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIAEDQAARLADLE 351


>gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259411|gb|EDS73377.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
          Length = 355

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 249/352 (70%), Gaps = 5/352 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ RF E+   +S    ++    Y +L +E++ + PI+     Y    ++ + 
Sbjct: 1   MLDKLKSIEKRFNEVSEDISNPDIINNHELYTELIKEHSHLEPIVIAYKKYADVMEQLES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D + D + +++   ++ ++ ++   LE EI  LL+PKD +DDK+ I+EIRAG G
Sbjct: 61  NKEMLNDSDDD-DFKEMILEDISSLNEQKEGLEQEIKILLIPKDPNDDKNVIVEIRAGVG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL RMY RYA   +WKVE+LS+++   GGYKE V +I G+G +SR+K+ESG
Sbjct: 120 GDEAALFAGDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+P TE+SGR+HTSA TVAVLPEA +++V+I   D+RID  R+SG+GGQ VNTTD
Sbjct: 180 THRVQRIPDTESSGRIHTSAITVAVLPEAEDVEVNIDPNDLRIDVYRSSGNGGQSVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIP+G++V    EKSQ +N+ +A+K+L+ARL+++E+++     ++NRK QIGSG
Sbjct: 240 SAVRITHIPSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQEAIASNRKSQIGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           DRSERIRTYNF QGR+TDHR+ LTLYKL  VL G ID+ I+ L+   Q++ +
Sbjct: 300 DRSERIRTYNFPQGRVTDHRVGLTLYKLNDVLDGDIDEFIDTLIVQDQSEQM 351


>gi|167038490|ref|YP_001666068.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320116886|ref|YP_004187045.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|238687641|sp|B0K7G6|RF1_THEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166857324|gb|ABY95732.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929977|gb|ADV80662.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 356

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 173/356 (48%), Positives = 253/356 (71%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ ++  ++S+   +     + K  +E+AAI  I+ K   Y +  ++ + 
Sbjct: 1   MIDKLQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++   ++D E++++A+ E+  +E++  +L  EI  LL+PKD +D+K+ I+EIRAG G
Sbjct: 61  TKELLS--SNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  + WKVE++SS++ D GG+KE++  ISG+G +SR+K+ESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+HTS ATVAVLPE  E+DV+I   DI+ID  R+ G GGQ VNTTD
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIKIDVFRSGGHGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    E+SQ QNR RA+K+LRA+LY++  +    E +  RK Q+G+G
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKSQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSERIRTYNF QGR+TDHRI LTLY+L+ VL G +D+II+ L+   QA+ + + +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNMN 354


>gi|241667853|ref|ZP_04755431.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 361

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 257/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   + E+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +++  + ++ +   D+E+ ++A+ E+ +  + I  LE+E+  LLLP+D +DD +  LEIR
Sbjct: 61  DKEAAYEMLNEK--DAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13]
 gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13]
          Length = 358

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L  ++ E+  ++S       +D + K+++E+A ++PII   S Y +  +
Sbjct: 1   MKDSMKNKLENLILKYEELNNKLSSEGITSDLDLFKKISKEHADLTPIIETYSGYKKLVK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++    SD E+++ AQ E+   + EI   E+++  LL+PKD +DDK+  LEIR
Sbjct: 61  NIEEAKEML----SDPEMKEFAQEEIDNSKDEIINFESKLQTLLIPKDPNDDKNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL+RMY RYA    W VEV+SS+++  GGYKEI+A I+G G +S++K
Sbjct: 117 AGTGGDESALFAADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKINGDGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAVLPEA EI+  DI   DIRIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPDTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH PTGI+V    ++SQH+N+ +AM +L A++ D + +   ++R++ RK 
Sbjct: 237 INKTDSAVRITHEPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQIQAQQSQRASERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGRITDHRINLTLYK+++++ G ++++IN L   HQA ++   
Sbjct: 297 LIGSGDRSERIRTYNFPQGRITDHRINLTLYKIDFIMDGDLEEMINALSLEHQASLLAEE 356

Query: 356 SE 357
           +E
Sbjct: 357 NE 358


>gi|254451602|ref|ZP_05065039.1| peptide chain release factor 1 [Octadecabacter antarcticus 238]
 gi|198266008|gb|EDY90278.1| peptide chain release factor 1 [Octadecabacter antarcticus 238]
          Length = 344

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 189/346 (54%), Positives = 250/346 (72%), Gaps = 4/346 (1%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +  RF  +E +M E    +A++ ++ EYA + P++  +  Y     E +    ++    
Sbjct: 2   QITERFEFLEAQMGEGLGGEAFVAVSREYAELRPVVEVVRTYQDLTAEIEGAEAML---- 57

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           SD E+++LA++E+  + +++   E  +   L+PKD  D K  +LEIR GTGG EAALF  
Sbjct: 58  SDPEMKELAEMELPQLRQQLPAAEAAVKLALIPKDAADGKPALLEIRPGTGGDEAALFAA 117

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           DL RMY+RYA  R W  E+L  S ++ GG KE+ A I+G  VF+RMK+ESGVHRVQRVP 
Sbjct: 118 DLLRMYQRYAENRGWTFEILEESQSELGGIKEVTARIAGNNVFARMKYESGVHRVQRVPE 177

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TE+ GR+HTSAATVAVLPEA ++D+ I   DIRIDTMRASGSGGQHVNTTDSAVRITH+P
Sbjct: 178 TESGGRIHTSAATVAVLPEAEDVDIQINANDIRIDTMRASGSGGQHVNTTDSAVRITHMP 237

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           +GI+VTSSEKSQH+NR  AM+VL+ RLYD ER+++ +ERSA+R  Q+GSGDRSERIRTYN
Sbjct: 238 SGIVVTSSEKSQHRNREIAMQVLKTRLYDAERQKVHDERSADRAAQVGSGDRSERIRTYN 297

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           F QGR+TDHRINLTLYKL+ VLQG +D++I+ L+   QA  +    
Sbjct: 298 FPQGRMTDHRINLTLYKLDAVLQGDLDEVIDGLIQDAQASALAEMG 343


>gi|167038767|ref|YP_001661752.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300913648|ref|ZP_07130965.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307723337|ref|YP_003903088.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
 gi|238687578|sp|B0K1F7|RF1_THEPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166853007|gb|ABY91416.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300890333|gb|EFK85478.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307580398|gb|ADN53797.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
          Length = 356

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 254/356 (71%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ E+  ++S+   +   + + K  +E+AAI  I+ K   Y +  ++ + 
Sbjct: 1   MIDKLQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++   ++D E++++A+ E+  +E++  +L  EI  LL+PKD +D+K+ I+EIRAG G
Sbjct: 61  TKELLS--SNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  + WKVE++SS++ D GG+KE++  ISG+G +SR+K+ESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+HTS ATVAVLPE  E+DV+I   DI++D  R+ G GGQ VNTTD
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIKVDVFRSGGHGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    E+SQ QNR RA+K+LRA+LY++  +    E +  RK Q+G+G
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKSQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSERIRTYN+ QGR+TDHRI LTLY+L+ VL G +D+II+ L+   QA+ + + +
Sbjct: 299 ERSERIRTYNYPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNMN 354


>gi|226946181|ref|YP_002801254.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
 gi|259585215|sp|C1DEV0|RF1_AZOVD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226721108|gb|ACO80279.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
          Length = 360

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 162/362 (44%), Positives = 240/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R+ E+   + ++  +     +   ++EYA + P+++    + + + 
Sbjct: 1   MKASLLNKLDLLHDRYEELTALLGDAEVIAEQGRFRAYSKEYAEVEPVVAAYREFRKVRD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ D  SD ++R++A  EV    + +  LE+ +  +LLP+D +D ++  LEIR
Sbjct: 61  DLAGAQALLKD--SDPDLREMAAEEVAEARERLAGLEDRLQRMLLPRDPNDARNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W++E+LS +  + GGYKEI+  + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAEKQGWRIEILSENPGEHGGYKEIITRVEGDNVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   ++R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPAELRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR +AM  L A+L D +      E S  R+L
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHREISETRRL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+T+HRINLTLY L+ V+ G ++ +I PLL+ +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTEHRINLTLYALDEVMAGGVEAVIEPLLSEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|209516553|ref|ZP_03265407.1| peptide chain release factor 1 [Burkholderia sp. H160]
 gi|209502994|gb|EEA02996.1| peptide chain release factor 1 [Burkholderia sp. H160]
          Length = 360

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S      ++D Y KLT E+A + P++ +  ++ Q + 
Sbjct: 1   MKTSMQRKLDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVDQYGLWRQAQN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    +D+ +RD A+ E+ A    +  L  E+  +LLPKD +DD++  LEIR
Sbjct: 61  DAATAQELL----TDASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA   +W+VE++S+S++D GGY+E++  I+G   +S++K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQTHEQQTKEAATRKN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+L+ ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|317133626|ref|YP_004092940.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3]
 gi|315471605|gb|ADU28209.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3]
          Length = 356

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 178/354 (50%), Positives = 246/354 (69%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+ D  +R+ EI  R+S+  ++     Y KL  E+  ++P++     Y Q   +E +  
Sbjct: 3   EQLEDTCSRYTEIAARLSQPDALADRAAYAKLMREHKQLTPLVEAYHAYQQATADEMEAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++   N D+++R LA  E+     E   LE +++ LLLP+D +D+K+ I+EIRAG GG 
Sbjct: 63  ELL--ENGDADLRALAAEELADARAEKERLEQKLHLLLLPRDPNDEKNVIIEIRAGAGGE 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +LFRMY  YA  R WK E L+ ++ + GG KEI   + G G +SR+KFESGVH
Sbjct: 121 EAALFAAELFRMYSMYAERRGWKAETLNMNETELGGMKEISCMVEGEGAYSRLKFESGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTS  TVAVLPEA +++VDI  ED+RIDT R+SG+GGQH+N T+SA
Sbjct: 181 RVQRVPETEAGGRIHTSTVTVAVLPEAEDVEVDIAPEDLRIDTFRSSGAGGQHINKTESA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTG++V    E+SQH+NR RAMKVLR+RL D  +     E +  R+ Q+G+GDR
Sbjct: 241 IRITHLPTGLVVECQDERSQHKNRDRAMKVLRSRLLDRAQSAQDEEIATTRRTQVGTGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRI LTLY L+ VL G +D++I+PL+TA QA+ + +  
Sbjct: 301 SERIRTYNFPQGRVTDHRIGLTLYHLDAVLSGNLDEVIDPLITADQAEKLKAGE 354


>gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
 gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
          Length = 361

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 257/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +SE   +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLSEVGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++Q  + ++ +   D+E+ ++A+ E+    + I +LE+E+  LLLP+D +DD +  LEIR
Sbjct: 61  DKQAAYEMLNEK--DAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|146283509|ref|YP_001173662.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
 gi|166223591|sp|A4VPB9|RF1_PSEU5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145571714|gb|ABP80820.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
          Length = 360

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 241/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EYA + P+I       + +Q
Sbjct: 1   MKASLLNKLDILQDRFEELTALLGDAEVISDQSRFRAYSREYAEVEPVIVAYRQLCKVQQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A+ EV   + ++  LE  +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VE+LS S+ + GGYKE+++ + G  V++++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E    +I   ++RIDT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR +AM  L A+L D +      E S  RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L  V+ G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLNEVIGGAVEQVIEPLLQEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|218133361|ref|ZP_03462165.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992234|gb|EEC58238.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC
           43243]
          Length = 363

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 183/354 (51%), Positives = 250/354 (70%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ DL +R+ +I L +S    V+    +  L +E   I+PI++  + Y   KQ  +D  T
Sbjct: 10  RLEDLVHRYEDITLELSNPDVVNDQKRFRDLMKEQNDITPIVNAYNEYKSCKQNIEDSLT 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D  +D E+++LA+ E+   +K   ELENE+  LLLPKD +DDK  I+EIRAG GG E
Sbjct: 70  ML-DEENDEELKELAKEELNDSKKRAEELENELKILLLPKDPNDDKDIIVEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  +LFRMY  YA  R+WKVEV++S +   GG KEI   + G+G +S +K+ESGVHR
Sbjct: 129 AALFAAELFRMYTHYAESRRWKVEVVNSDETGIGGMKEIEFMVKGQGAYSVLKYESGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GR+HTS ATVAV+PEA E+DV I  +DIRID MRASG+GGQ VNTTDSAV
Sbjct: 189 VQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDEKDIRIDVMRASGNGGQCVNTTDSAV 248

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH PTGI++ + +EKSQ QN+ +A  +LRA+LYD+E ++  +  +  R+ QIG+GDRS
Sbjct: 249 RLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKAHDAEADARRSQIGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYNF QGR+TDHRI LTLYKL+ ++ G I +II+  + A QA  +    E
Sbjct: 309 EKIRTYNFPQGRVTDHRIGLTLYKLDKIMDGDIQEIIDACIAADQAAKLAKMGE 362


>gi|296445919|ref|ZP_06887870.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
 gi|296256587|gb|EFH03663.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
          Length = 356

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 188/356 (52%), Positives = 261/356 (73%), Gaps = 1/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +  ++  +  R  EI  R++  P   +++ L+ E A +  ++++I  +     E   L
Sbjct: 1   MFAQDKLDLILRRHDEIGARLAAGPDAASFVALSRELATLDDVVARIRTWRATSAEIAGL 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D   + E+R   + E+ A E  +   E E+   LLPKD+ D+K  ILE+RAGTGG
Sbjct: 61  GEMLADPALEPEMRAFVEGELDAAESALASAEQELKLALLPKDSADEKGVILEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFR Y++YA ++ W VE+LS+S+   GGYKEIVA ISGRGV++R+KFESGV
Sbjct: 121 DEAALFAGDLFRAYQKYAGVKGWGVEILSASEGALGGYKEIVAEISGRGVYARLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE  GR+HTSAATVAVLP+A E+DV I  +D++I+TMR+ G+GGQHVN T+S
Sbjct: 181 HRVQRVPATETQGRIHTSAATVAVLPQAEEVDVAIDDKDLQIETMRSGGAGGQHVNKTES 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITH+P+GI+V    E+SQH+NR +AM+VLR+RL+D ER+R+ + R+A+RK Q+GSGD
Sbjct: 241 AIRITHLPSGIVVMMQEERSQHRNRAKAMEVLRSRLFDAERQRLDSARAADRKAQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D+I + L T HQAK++  + E
Sbjct: 301 RSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGELDEIFDALTTDHQAKLLAQSEE 356


>gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
 gi|259585227|sp|C3KDC6|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
          Length = 360

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 249/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + +   +     +   ++EYA + PI++      + + 
Sbjct: 1   MKASLLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVATYKHLTKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAVLPE  E + ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF+QGR+TDHR+NLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAI 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|289577389|ref|YP_003476016.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
 gi|289527102|gb|ADD01454.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
          Length = 356

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 176/356 (49%), Positives = 251/356 (70%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ E+  ++S+   +     + K  +E+AAI  I+ K   Y +  ++   
Sbjct: 1   MIDKLQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINS 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++   + + E+R++A+ E+  +E++  EL  EI  LL+PKD +D+K+ I+EIRAG G
Sbjct: 61  TKELLS--SDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  + WKVE++SS++ D GG+KE++  ISG+G +SR+K+ESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+HTS ATVAVLPE  E+DV+I   DIRID  R+ G GGQ VNTTD
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIRIDVFRSGGHGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    E+SQ QNR RA+K+LRA+LY++  +    E +  RK Q+G+G
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKEIAEARKSQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSERIRTYNF QGR+TDHRI LTLY+L+ VL G +D+II+ L+   QA+ + + +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNVN 354


>gi|84394465|ref|ZP_00993179.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
 gi|84374906|gb|EAP91839.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
          Length = 362

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q ++
Sbjct: 1   MKASILIKLETLVERYEEVQHLLGDPGVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  +   D+E+R++AQ E+   +  I  L +E+  LL+PKD +D+++C LEIR
Sbjct: 61  DLEAAEEMANE--DDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F G+LFRMY R+A  + W+VEV+SS+ ++ GG+KE++A ISG  V+  MK
Sbjct: 119 AGAGGDEAGIFAGNLFRMYSRFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAV+PE  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E +R A   S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAAISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  VL+G +  +++P+L  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVLQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|309973234|gb|ADO96435.1| Peptide chain release factor 1 [Haemophilus influenzae R2846]
          Length = 361

 Score =  290 bits (741), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  ++G GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P+  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPKLPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ ++ G ID++I P++T +QA  + + 
Sbjct: 298 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEIMNGKIDELIQPIITEYQADQLAAL 357

Query: 356 SE 357
           SE
Sbjct: 358 SE 359


>gi|240849863|ref|YP_002971251.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
 gi|240266986|gb|ACS50574.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
          Length = 358

 Score =  290 bits (741), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 218/355 (61%), Positives = 282/355 (79%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  L+ RF  IE +M+ +P+ + Y+KL  EYA + P+I+ I   +   +E  
Sbjct: 1   MVSLPQDRMRQLEKRFEIIERQMTTNPNAETYVKLASEYAELQPVIASIRALNALYKEIT 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L T+I D  +D E+R+LAQ E+  + K++ + E E+  LLLPKD  D+K+ I+EIRAGT
Sbjct: 61  ELETIINDKQTDVEMRNLAQEELPLLYKKVEQFEKELQILLLPKDVADEKNAIVEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYA    WKVEV+S S+ + GGYKEI+ATISG+GVFS++K+ES
Sbjct: 121 GGSEAALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE  GR+HTSAATVAVLPEA EID+DI  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIDIRPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+ER++  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTLYKL+ +L+G +D++++ L++ HQ  ++   
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRILEGDLDELLHALISDHQTTLLMEM 355


>gi|260772290|ref|ZP_05881206.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
 gi|260611429|gb|EEX36632.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
          Length = 362

 Score =  290 bits (741), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 248/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  +      Y Q ++
Sbjct: 1   MKASILVKLESLVERYEEVQHLLGDPAVIGDQNKFRSLSKEYSQLEEVTKCFQAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A + EI  L  E+  LLLPKD +DD++C LEIR
Sbjct: 61  DFVAAEEMTKE--DDAEMREMAQDEMKAAKAEIERLSAELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+S+S+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSASEAEHGGYKEMIAKVNGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E K+ A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIVQAEEKKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ Q R++DHRINLT+Y+L  V++G +  +I+P++  HQA ++ + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQSRVSDHRINLTIYRLNEVMEGDLQALIDPVVQEHQADLLAAL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
 gi|226739100|sp|B8FEA2|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 355

 Score =  290 bits (741), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 186/356 (52%), Positives = 241/356 (67%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ RF E+E  +S+   V     Y K   E+A +S ++     Y Q  +  ++
Sbjct: 1   MLDRLEGVEQRFLEVESLLSDPKIVGDQKVYQKYVREHADLSKVVEAYREYKQVLEGLEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D +I+DLA+ E+  ++KE   LE+E+  LLLPKD +DDK+ ILEIRAGTG
Sbjct: 61  SKELLKDP--DPDIKDLAKEEIDRLDKEQVRLEDELKILLLPKDPNDDKNVILEIRAGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  DLFRMY RYA  R WKVE LS      GG KEI A I+G+GV+S  KFESG
Sbjct: 119 GDEAGLFAADLFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMITGQGVYSAFKFESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TEA GR+HTSA TVAVLPEA E+D+ I   +IR+D  R+ G+GGQHVNTTD
Sbjct: 179 THRVQRVPVTEAQGRIHTSACTVAVLPEAEEVDIQIDPSEIRVDVYRSQGAGGQHVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQH+N+ +AMKVLRARL D   +      SA RK Q+GSG
Sbjct: 239 SAVRLTHLPTGVVVTCQDEKSQHKNKAKAMKVLRARLLDHAVQEQNASISAERKSQVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+TDHRI LTLYKLE ++ G I +I++ L T + A+ +    
Sbjct: 299 DRSERIRTYNYPQGRVTDHRIGLTLYKLESIMAGQISEIVDALTTHYNAEALQEGG 354


>gi|291538249|emb|CBL11360.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
           intestinalis XB6B4]
          Length = 358

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 246/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF E+   +SE    +    + KL +E + ++PI++    Y Q KQ  +D  
Sbjct: 3   DKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R+LA+ E+   +  + ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  ALLEEESD-EEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R WK E++ + +   GG K +   +SG+G +S MK+ESGVH
Sbjct: 122 EAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEEVDVQIDDKDIRIDVCRASGAGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++ + +EKSQ QN+ +A  +LR +LYD+E+++  +  +  RK Q+G+GDR
Sbjct: 242 VRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQKAHDAEAELRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRINLTLYKL+ ++ G I +II+  + A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQAAKLAKMNE 356


>gi|148981991|ref|ZP_01816579.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
 gi|145960679|gb|EDK26023.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
          Length = 362

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  +      Y Q + 
Sbjct: 1   MKASILVKLETLVERYEEVQHLLGDPDVIGDQNKFRALSKEYSQLEEVTKCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +D+++C LEIR
Sbjct: 61  DLEAAEDMAQE--DDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDERNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F G+LFRMY ++A  + W+VEV+SS+D++ GGYKE++A +SG GV+  MK
Sbjct: 119 AGAGGDEAGIFAGNLFRMYSKFAEKKGWRVEVMSSNDSEQGGYKEMIAKVSGEGVYGVMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAV+PE  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E +R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLTLY+L  VL+G +  +I+P+L  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTLYRLNEVLEGDMQSLIDPVLQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|188580162|ref|YP_001923607.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
 gi|226739114|sp|B1Z914|RF1_METPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179343660|gb|ACB79072.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
          Length = 361

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 180/359 (50%), Positives = 251/359 (69%), Gaps = 3/359 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M  +   ++  +  R   +  ++++     ++ ++L+ E + +  +++ I  Y   +   
Sbjct: 1   MTPIPSDRLDAILARHEFVTAQLADGSADAESIVQLSRELSELDGVVAAIRHYRAAEANL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             +  +I +   D E+R LA  E    E+ + +    +  +LLPKD  D+KS ILEIRAG
Sbjct: 61  AGIRALIDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLMLLPKDAADEKSAILEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY +YA  + W+VEV+S S+   GGY+E+VA + GR VFSR+KFE
Sbjct: 121 TGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVKGRSVFSRLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE  GR+HTSAATVAVLPEA E+D+ I   D++IDTMRA G+GGQHVN 
Sbjct: 181 SGAHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDIAINEADLKIDTMRAQGAGGQHVNK 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA+RITH+PTG++V    E+SQH+NR RAM +LR++L+D ER    + R+A+RK Q+G
Sbjct: 241 TESAIRITHMPTGVVVFVQEERSQHKNRARAMALLRSKLFDAERTAKDSARAADRKAQVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHRINLTLYKLE V+ G  +D++I+ L+T HQA+++ +  
Sbjct: 301 SGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVTEHQAELLAAEG 359


>gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 360

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 249/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + +   +   + +   ++EYA + PI++      + + 
Sbjct: 1   MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVATYKQLLKVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   + ++ ELE+ +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVREAKDQLVELESSLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAVLPE  E + ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMAWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF+QGR+TDHR+NLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAI 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|217977729|ref|YP_002361876.1| peptide chain release factor 1 [Methylocella silvestris BL2]
 gi|254790890|sp|B8EI32|RF1_METSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217503105|gb|ACK50514.1| peptide chain release factor 1 [Methylocella silvestris BL2]
          Length = 360

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 188/356 (52%), Positives = 266/356 (74%), Gaps = 2/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L  +++  +  R+ E+  R++E+     Y++L+ E+A +  + + I  Y  + QE + L
Sbjct: 1   MLPQEKLDLILRRYDEVSARLNEAVEPALYVQLSREFAGLEQVAAAIRDYRSQMQEVEGL 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D  +DSE+R LA+ E+   ++ +  LE+++   LLPKD  D++S ILE+RAGTGG
Sbjct: 61  AAMLADPTTDSEMRGLAEEELRDAKERLEALEHQLKIALLPKDAADERSAILEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYA  + W VE++S+++   GG+KEI+A I+GRGVF+++KFESG 
Sbjct: 121 DEAALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEIIAEIAGRGVFAKLKFESGA 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAATVAVLPEA E+DV+I   D++IDTMRA G+GGQHVN T+S
Sbjct: 181 HRVQRVPDTETQGRIHTSAATVAVLPEAQEVDVEINEADLKIDTMRAQGAGGQHVNKTES 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITHIPTG +V    E+SQH+NR RAM +LR+R+YD +R+++  ER+A+R+ Q+GSGD
Sbjct: 241 AIRITHIPTGTIVFVQDERSQHKNRARAMALLRSRIYDEQRQKLDAERAADRRSQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLTLYKL+ V+ G  +D++I+ L T HQA ++  + 
Sbjct: 301 RSERIRTYNFPQGRVTDHRINLTLYKLDKVITGEALDEVIDALTTHHQAALLADSE 356


>gi|119477466|ref|ZP_01617657.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2143]
 gi|119449392|gb|EAW30631.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2143]
          Length = 361

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 167/361 (46%), Positives = 246/361 (68%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +R  E+   +S+   +   + Y  L++EYA + P++     Y Q   
Sbjct: 1   MKDSIKNKLDNLVDRHEELGALLSDGEVIGDQNKYRALSKEYAEVEPVVKCYENYCQTLD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++  +++ D   D+++R++AQ E+   + +   +  E+  LLLP+D +D  +  LEIR
Sbjct: 61  DIEEAKSLLKD--GDADMREMAQEELSGAQSQRDVMMEELQRLLLPRDPNDSHNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WK+E++S    D GGYKE+++ +SG+ V++ +K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYTRYAENKGWKIEIISERSGDHGGYKELISRVSGQDVYAHLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVA++PE   +D  +I   D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAIMPEVDSVDEVEINKSDLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIP+G++V    E+SQH+N+ RAM +L++RL    + +   E+S  R+ 
Sbjct: 239 VNKTDSAIRITHIPSGLVVECQDERSQHKNKARAMSLLQSRLLTGIQDKQQQEQSDERRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL  V++G + D+I+PL   +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLAEVMEGALGDVIDPLRNEYQADQLAAM 358

Query: 356 S 356
           +
Sbjct: 359 A 359


>gi|297543676|ref|YP_003675978.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841451|gb|ADH59967.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 356

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 176/356 (49%), Positives = 251/356 (70%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ E+  ++S+   +     + K  +E+AAI  I+ K   Y +  ++   
Sbjct: 1   MIDKLQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINS 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++   + + E+R++A+ E+  +E++  EL  EI  LL+PKD +D+K+ I+EIRAG G
Sbjct: 61  TKELLS--SDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  + WKVE++SS++ D GG+KE++  ISG+G +SR+K+ESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+HTS ATVAVLPE  E+DV+I   DIRID  R+ G GGQ VNTTD
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIRIDVFRSGGHGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    E+SQ QNR RA+K+LRA+LY++  +    E +  RK Q+G+G
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKEIAEVRKSQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSERIRTYNF QGR+TDHRI LTLY+L+ VL G +D+II+ L+   QA+ + + +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNVN 354


>gi|53717070|ref|YP_105275.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|67639917|ref|ZP_00438745.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|121597849|ref|YP_990282.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124382410|ref|YP_001024781.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126447218|ref|YP_001079120.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|251768001|ref|ZP_04820356.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
 gi|254175822|ref|ZP_04882481.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|254203239|ref|ZP_04909601.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|254208574|ref|ZP_04914923.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|254355790|ref|ZP_04972069.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|61214592|sp|Q62DF3|RF1_BURMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223532|sp|A3MFT4|RF1_BURM7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223533|sp|A2RYL2|RF1_BURM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223534|sp|A1UWC9|RF1_BURMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52423040|gb|AAU46610.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|121225647|gb|ABM49178.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124290430|gb|ABM99699.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126240072|gb|ABO03184.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|147746284|gb|EDK53362.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|147751261|gb|EDK58329.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|148024761|gb|EDK82944.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|160696865|gb|EDP86835.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|238520529|gb|EEP83988.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|243061104|gb|EES43290.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
          Length = 360

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S       +D Y KLT E+A I P++   + + Q + 
Sbjct: 1   MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+ E+      +  L  E+  +LLPKD +D+++  +EIR
Sbjct: 61  DELAAQELLA----DASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF G+L RMY RYA  ++W+VE++S S +D GGYKE++  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|171319081|ref|ZP_02908205.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
 gi|171095720|gb|EDT40676.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
          Length = 360

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 256/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y +LT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+ E+ +  + +  LE E+  +LLPKD +DD++  LEIR
Sbjct: 61  DETAAQELLA----DASMRDFAEDEIRSARERMVRLEGELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L+T HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEALMDGDLDELIGALVTEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|323136601|ref|ZP_08071682.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
 gi|322397918|gb|EFY00439.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
          Length = 356

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 187/355 (52%), Positives = 255/355 (71%), Gaps = 1/355 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +  ++  +  R+ EI  +++       ++ L+ E A +  ++  I  +   ++E  DL
Sbjct: 1   MFAQDKLDLILRRYDEIGEKLAGGADGQTFVALSRERATLDDVVDAIRAWRDAQREVDDL 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D + D E+R LA+ E     +++    N +   LLPKD  D+K  ILE+RAGTGG
Sbjct: 61  AAMLADSSLDPEMRALAESETDGAREKLEAAANTLRLALLPKDEADEKGVILEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFR Y++YAAL+ W+VE++S S    GG+KEIVA I GRGV+ R+KFESGV
Sbjct: 121 DEAALFAGDLFRAYQKYAALKGWRVELVSESPGALGGFKEIVAEIIGRGVYGRLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAATVAVLP+A ++D+DI  +D++IDTMRA G+GGQHVN T+S
Sbjct: 181 HRVQRVPETETQGRIHTSAATVAVLPQAEDVDIDIDEKDLQIDTMRAQGAGGQHVNKTES 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITHIP+GI+V    E+SQH+N+ +AM VLR+RLYD ER+R+  ERS +RK Q+GSGD
Sbjct: 241 AIRITHIPSGIVVMMQEERSQHRNKAKAMNVLRSRLYDAERQRLDKERSDDRKQQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLTLYKL+ V++G  D+II+ L T HQ K++  + 
Sbjct: 301 RSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGEFDEIIDALTTDHQQKLLAQSE 355


>gi|152986475|ref|YP_001350646.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
 gi|166223587|sp|A6VC61|RF1_PSEA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150961633|gb|ABR83658.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
          Length = 360

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 242/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L +R+ E+   + ++  +     +   + EYA + P+I     Y + + 
Sbjct: 1   MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD E+RDLA+ EV    + +  L + +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPELRDLAEEEVAEARERLAALGDSLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VE LS ++ + GGYKE++A + G  V++++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGENVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITH+P+GI+V    E+SQH+NR +AM  L A+L D ++       ++ RKL
Sbjct: 239 VNKTDSAVRITHLPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY L  V++G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLLQEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|317401193|gb|EFV81839.1| peptide chain release factor 1 [Achromobacter xylosoxidans C54]
          Length = 360

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E++  ++E      +D + KL+ E A + P++   + + + ++
Sbjct: 1   MKSSMRSRLEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFVRGEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E++ +A+ E+ +   ++  LE  +  LLLP+D +D +S  LEIR
Sbjct: 61  DLATAQEMLA----DPELKAMAEDEIKSGRVKLESLEAALQLLLLPRDPNDGRSVFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  R W+VE++S S ++ GGYKE++A I G G + R+K
Sbjct: 117 AGTGGDESALFSGDLLRMYTRYAEQRGWRVELMSESPSELGGYKEVIARIEGDGAYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVA++ EA E+    I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATEAQGRIHTSACTVAIMAEADEMSEIVINPSDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ +AM+VL ARL D E +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQSKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ++++   L+  HQA+ + + 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQAEQLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|240147055|ref|ZP_04745656.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
 gi|257200778|gb|EEU99062.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
 gi|291535754|emb|CBL08866.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
           intestinalis M50/1]
          Length = 357

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 246/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF E+   +SE    +    + KL +E + ++PI++    Y Q KQ  +D  
Sbjct: 3   DKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R+LA+ E+   +  + ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  ALLEEESD-EEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R WK E++ + +   GG K +   +SG+G +S MK+ESGVH
Sbjct: 122 EAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEEVDVQIDDKDIRIDVCRASGAGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++ + +EKSQ QN+ +A  +LR +LYD+E+++  +  +  RK Q+G+GDR
Sbjct: 242 VRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQKAHDAEAELRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRINLTLYKL+ ++ G I +II+  + A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQAAKLAKMNE 356


>gi|53720682|ref|YP_109668.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76809766|ref|YP_334968.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126440521|ref|YP_001060595.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126454756|ref|YP_001067845.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134283294|ref|ZP_01769995.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|167721407|ref|ZP_02404643.1| peptide chain release factor 1 [Burkholderia pseudomallei DM98]
 gi|167740375|ref|ZP_02413149.1| peptide chain release factor 1 [Burkholderia pseudomallei 14]
 gi|167817592|ref|ZP_02449272.1| peptide chain release factor 1 [Burkholderia pseudomallei 91]
 gi|167825994|ref|ZP_02457465.1| peptide chain release factor 1 [Burkholderia pseudomallei 9]
 gi|167847481|ref|ZP_02472989.1| peptide chain release factor 1 [Burkholderia pseudomallei B7210]
 gi|167896069|ref|ZP_02483471.1| peptide chain release factor 1 [Burkholderia pseudomallei 7894]
 gi|167904455|ref|ZP_02491660.1| peptide chain release factor 1 [Burkholderia pseudomallei NCTC
           13177]
 gi|167912716|ref|ZP_02499807.1| peptide chain release factor 1 [Burkholderia pseudomallei 112]
 gi|167920676|ref|ZP_02507767.1| peptide chain release factor 1 [Burkholderia pseudomallei BCC215]
 gi|217424712|ref|ZP_03456209.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|226198171|ref|ZP_03793742.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237813980|ref|YP_002898431.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242316197|ref|ZP_04815213.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254190473|ref|ZP_04896981.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|254198514|ref|ZP_04904935.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|254260133|ref|ZP_04951187.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
 gi|254300725|ref|ZP_04968170.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|61214599|sp|Q63QF0|RF1_BURPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361515|sp|Q3JN85|RF1_BURP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223535|sp|A3NZS4|RF1_BURP0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223536|sp|A3NE24|RF1_BURP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52211096|emb|CAH37084.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76579219|gb|ABA48694.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126220014|gb|ABN83520.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126228398|gb|ABN91938.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134245489|gb|EBA45582.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|157810508|gb|EDO87678.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|157938149|gb|EDO93819.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|169655254|gb|EDS87947.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|217392168|gb|EEC32193.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|225929691|gb|EEH25707.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237505256|gb|ACQ97574.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242139436|gb|EES25838.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254218822|gb|EET08206.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
          Length = 360

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S       +D Y KLT E+A I P++   + + Q + 
Sbjct: 1   MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+ E+      +  L  E+  +LLPKD +D+++  +EIR
Sbjct: 61  DELAAQELLA----DASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|254226890|ref|ZP_04920458.1| peptide chain release factor 1 [Vibrio cholerae V51]
 gi|125620572|gb|EAZ48938.1| peptide chain release factor 1 [Vibrio cholerae V51]
          Length = 362

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD DDD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPDDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|15642178|ref|NP_231810.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|147674456|ref|YP_001217695.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|153213234|ref|ZP_01948646.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|153801649|ref|ZP_01956235.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|153818801|ref|ZP_01971468.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|153823572|ref|ZP_01976239.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|153825583|ref|ZP_01978250.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|153828626|ref|ZP_01981293.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|227082304|ref|YP_002810855.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|229507743|ref|ZP_04397248.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229512021|ref|ZP_04401500.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229513825|ref|ZP_04403287.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229519157|ref|ZP_04408600.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229522130|ref|ZP_04411547.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229524175|ref|ZP_04413580.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229528814|ref|ZP_04418204.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229607288|ref|YP_002877936.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254291410|ref|ZP_04962203.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|254849258|ref|ZP_05238608.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255745092|ref|ZP_05419041.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262167528|ref|ZP_06035234.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|20139356|sp|Q9KQ25|RF1_VIBCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047628|sp|A5F696|RF1_VIBC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790906|sp|C3LPI4|RF1_VIBCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9656733|gb|AAF95324.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|124116034|gb|EAY34854.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|124122826|gb|EAY41569.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|126510644|gb|EAZ73238.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|126518907|gb|EAZ76130.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|146316339|gb|ABQ20878.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|148875897|gb|EDL74032.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|149740734|gb|EDM54833.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|150422740|gb|EDN14694.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|227010192|gb|ACP06404.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|227014075|gb|ACP10285.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|229332588|gb|EEN98074.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229337756|gb|EEO02773.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229341055|gb|EEO06060.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229343846|gb|EEO08821.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229349006|gb|EEO13963.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229351986|gb|EEO16927.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229355248|gb|EEO20169.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229369943|gb|ACQ60366.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254844963|gb|EET23377.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255736922|gb|EET92318.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262024100|gb|EEY42795.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|327484701|gb|AEA79108.1| Peptide chain release factor 1 [Vibrio cholerae LMA3894-4]
          Length = 362

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|78484734|ref|YP_390659.1| peptide chain release factor 1 [Thiomicrospira crunogena XCL-2]
 gi|119361633|sp|Q31IN8|RF1_THICR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78363020|gb|ABB40985.1| bacterial peptide chain release factor 1 (bRF-1) [Thiomicrospira
           crunogena XCL-2]
          Length = 363

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 252/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L  R  E+   +S+   ++    +  LT+E++ ++P++   + + Q + 
Sbjct: 1   MKESIRSKLENLVERLDEVNHLISDPEIINNQNKFRNLTKEHSQLTPVVETFNQFIQNQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q+   +I   + D +++++ Q E+  +EK+   LE E+  +LLPKD +DD +  LEIR
Sbjct: 61  DLQEAKDMIK--SGDPDLKEMGQEELPELEKQQATLEAELQKMLLPKDPNDDANIFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA   +W+VEV++S + + GGYKEI+A I G G +SR+K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAETMRWQVEVINSQEGEHGGYKEIIARIIGDGAYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GRVHTSAATV ++PEA +   +D+   D+++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATETQGRVHTSAATVVIMPEAQDVEQIDLNPADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG +V    E+SQH+NR RAM +L +R+ D  ++    E +  RK 
Sbjct: 239 VNKTDSAIRITHIPTGTVVECQDERSQHKNRARAMSLLASRIMDERQRIHDQEIAQERKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ ++QG +  +++PL+  +QA+ + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEIMQGGLQQVVDPLINEYQAEQLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|167838055|ref|ZP_02464914.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
          Length = 360

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S       +D Y KLT E+A I P++   + + Q + 
Sbjct: 1   MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+ E+      +  L  E+  +LLPKD +D+++  +EIR
Sbjct: 61  DELAAQELLA----DASMRDFAEDELRGARDRMSRLAAELQTMLLPKDPNDERNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|187925494|ref|YP_001897136.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
 gi|238689472|sp|B2SZ27|RF1_BURPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187716688|gb|ACD17912.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
          Length = 360

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S      ++D Y KLT E+A + P++   +++ Q   
Sbjct: 1   MKTSMQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVDHYALWRQAMN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+ +RD A+ E+ A  + + +L  E+  +LLPKD +DD++  LEIR
Sbjct: 61  DATTAQELLA----DASMRDFAEDEIRAARERMEKLGAELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A   +W+VE++S+S++D GGYKE++  I+G   +S++K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+L+ ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|83591213|ref|YP_431222.1| peptide chain release factor 1 [Moorella thermoacetica ATCC 39073]
 gi|119361560|sp|Q2RFW0|RF1_MOOTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83574127|gb|ABC20679.1| bacterial peptide chain release factor 1 (bRF-1) [Moorella
           thermoacetica ATCC 39073]
          Length = 356

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 242/356 (67%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEE---YAAISPIISKISIYDQKKQEEQD 61
             +++  ++ R+ E+   M +   +    +L +    +AA+  I++    Y Q   E  +
Sbjct: 1   MLEKLEQIEARYEELGRLMGDPEVIADPEQLQKHARAHAALEDIVTTFRRYRQVSNELAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D E ++L + E+  +  E   LE E+  LLLPKD +D+K  I+EIRAG G
Sbjct: 61  DKAML-EEEKDREFQELLKAEIERLTGEQERLEQELKILLLPKDPNDEKDIIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY+RYA  ++W+ E++SS   + GG+KEI+  + G+GV+SR+KFESG
Sbjct: 120 GEEAALFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQVEGQGVYSRLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE+ GR+HTS ATVAVLPEA E+DV+I  ED+R+D   +SG GGQ VNTT 
Sbjct: 180 VHRVQRIPTTESGGRIHTSTATVAVLPEAEEVDVEIKPEDLRVDIFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AM+VLRARL D+ R     E +  R+ Q+GSG
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAEREGELAEERRSQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LTL+ L+ VL G +D+II+ L+T  QA+ + +  
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTLHHLDQVLAGELDEIIDALVTTDQAERLKNME 355


>gi|115350468|ref|YP_772307.1| peptide chain release factor 1 [Burkholderia ambifaria AMMD]
 gi|170703671|ref|ZP_02894403.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|172059501|ref|YP_001807153.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
 gi|122324144|sp|Q0BIQ0|RF1_BURCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689166|sp|B1YSD5|RF1_BURA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115280456|gb|ABI85973.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           ambifaria AMMD]
 gi|170131417|gb|EDT00013.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|171992018|gb|ACB62937.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
          Length = 360

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y +LT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+ E+ +  + +  LE E+  +LLPKD +DD++  LEIR
Sbjct: 61  DETAAQELLA----DASMRDFAEDEIRSARERMVRLEAELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGAGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I  L+T HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEALMDGDLDELIGALVTEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|312958850|ref|ZP_07773369.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
 gi|311286620|gb|EFQ65182.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
          Length = 360

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + +   +     +   ++EYA + P+++    + +   
Sbjct: 1   MKASLLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPVVTTYGQWLKTHA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   + ++  LE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVREAKDKLIALEGDLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAVLPE  E + ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF+QGR+TDHR+NLTLY L+ +L G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAI 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|319406093|emb|CBI79723.1| peptide chain release factor 1 [Bartonella sp. AR 15-3]
          Length = 359

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 223/355 (62%), Positives = 286/355 (80%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV L   ++  L+ RF  IE +M+E+P+ + Y+KL  EYA + PII  I   +   +E  
Sbjct: 1   MVSLPQDRMKQLEKRFKIIESQMAENPNAETYVKLASEYAELQPIIVSIRALNSLCKEIT 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+ T+I D  +D+E+R+LAQ E+ ++ ++I+ELE E+  LLLPKD  D+KS I+EIRAGT
Sbjct: 61  DIETIISDTQTDTEMRNLAQEELSSLYQKIQELEQELQILLLPKDIADEKSVIIEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GGSEAALF GDLFRMYERYA    WKVEV+S SD + GGYKEI+ATISG+GVFS++KFES
Sbjct: 121 GGSEAALFAGDLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATISGKGVFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE  GR+HTSAATVAVLPEA EID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 181 GVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEICPEDIRIDTMRASGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RA+++LRARL+D+ER++  +ERSA+RK Q+GSG
Sbjct: 241 DSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKTQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRIN+TLYKL+ +++G ++++IN L++ HQ  ++   
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINMTLYKLDRIMEGDLNELINALISDHQTTLLTEM 355


>gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
 gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
          Length = 362

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ EI+  + +       + +  L++EY+ +  I      Y   K 
Sbjct: 1   MKSSILVKLETLVERYEEIQHLLGDPGILSDQNKFRALSKEYSQLEDITQCFQAYLGAKD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  +   D E+R++AQ EV   +  I  LE+E+  LL+PKD +DD++C +EIR
Sbjct: 61  DLEAAEEMAKE--DDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY RYA  R W++EV++ + ++ GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGILK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEINTGDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E ++   E ++ R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRI LTLY+L  V++G +D +I P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRITLTLYRLNEVMEGDLDSLIQPVIQEHQADELAAM 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR]
 gi|61214579|sp|Q5QUZ8|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR]
          Length = 364

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 178/357 (49%), Positives = 246/357 (68%), Gaps = 7/357 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +++  L  R+ E++  + E   +     +  L+ EY+ +  ++     Y Q + ++   
Sbjct: 7   ERKLEGLVERYQEVQALLGEPDVISDQNRFRSLSREYSQLEEVVGCFEEYRQNQDDQAAA 66

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +  D   D+E+R++A+ E+    K   ELEN +  LLLPKD +DD+SC LEIRAG GG
Sbjct: 67  KDMAED--DDAEMREMAEEELKEARKAEEELENRLQLLLLPKDPNDDRSCYLEIRAGAGG 124

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA++F GDLFRMY RYA    WKV ++S+SD + GGYKEI+A +SG GV+ RMKFESG 
Sbjct: 125 DEASIFAGDLFRMYSRYAEKNGWKVNIVSASDGEHGGYKEIIAHMSGDGVYGRMKFESGG 184

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTD 241
           HRVQRVP TE+ GR+HTSA TVAVLPE  E +  +I   D+R+DT RASG+GGQHVN TD
Sbjct: 185 HRVQRVPETESQGRIHTSACTVAVLPEIPEAEAVEINPADLRVDTYRASGAGGQHVNRTD 244

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+R+THIPTG++V    E+SQH+NR +AM VL+AR+  +E ++   E  + R+  +GSG
Sbjct: 245 SAIRLTHIPTGVVVECQEERSQHKNRAKAMSVLQARIQRLEDEKRQAEEDSTRRNLVGSG 304

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYN+ Q R+TDHRINLTLY+L+ VL G ID I++ ++T HQA  + + SE
Sbjct: 305 DRSERIRTYNYPQSRVTDHRINLTLYRLDEVLTGDIDLILDAIITEHQADQLAALSE 361


>gi|303248208|ref|ZP_07334471.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
 gi|302490346|gb|EFL50257.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
          Length = 357

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 179/354 (50%), Positives = 258/354 (72%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ ++E ++S+   V   + Y KL + +A ++ ++     + +  ++ ++   
Sbjct: 4   KLESLERKYVDLETQLSDPAVVGDQERYRKLAKAHADLAEVVEAFREHKRLSRDLEENTE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   D E+R+LA  EV  I + + ELE  +  LLLPKD  D+K+ +LEIRAGTGG E
Sbjct: 64  LAQDP--DPEMRELALAEVRTIREALPELEARLKLLLLPKDPMDEKNILLEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  ++WKVE++SSS+   GG+KE++A ISG  V+SR+K+ESG HR
Sbjct: 122 AALFAGDLFRMYSRYAETKRWKVEIMSSSETGSGGFKEVIANISGDKVYSRLKYESGAHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSA TVA++PEA E+DV I   D+RID  R+SG GGQ VNTTDSAV
Sbjct: 182 VQRVPATESQGRIHTSAVTVAIMPEAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDSAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG++V    EKSQH+N+ +A+KVLR+RL   E+++   E+ A+R+ Q+GSGDRS
Sbjct: 242 RVTHIPTGLVVICQDEKSQHKNKAKALKVLRSRLLQAEQEKQRLEQEASRRSQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF Q R+TDHRINLTLYKLE VL+G +D++ + L+  +Q++ + + ++
Sbjct: 302 ERIRTYNFPQSRVTDHRINLTLYKLEAVLEGDLDELFDGLIAHYQSEALKAQAD 355


>gi|262166266|ref|ZP_06034003.1| peptide chain release factor 1 [Vibrio mimicus VM223]
 gi|262025982|gb|EEY44650.1| peptide chain release factor 1 [Vibrio mimicus VM223]
          Length = 362

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|86148712|ref|ZP_01066989.1| peptide chain release factor 1 [Vibrio sp. MED222]
 gi|218708755|ref|YP_002416376.1| peptide chain release factor 1 [Vibrio splendidus LGP32]
 gi|254790907|sp|B7VKH3|RF1_VIBSL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85833505|gb|EAQ51686.1| peptide chain release factor 1 [Vibrio sp. MED222]
 gi|218321774|emb|CAV17730.1| Peptide chain release factor 1 [Vibrio splendidus LGP32]
          Length = 362

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q ++
Sbjct: 1   MKASILIKLETLVERYEEVQHLLGDPDVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  +   D+E+R++AQ E+   +  I  L +E+  LL+PKD +D+++C LEIR
Sbjct: 61  DLEAAEEMANE--DDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F G+LFRMY ++A  + W+VEV+SS+ ++ GG+KE++A ISG  V+  MK
Sbjct: 119 AGAGGDEAGIFAGNLFRMYSKFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAV+PE  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E +R A   S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAAISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  VL+G +  +++P+L  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVLQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|78065073|ref|YP_367842.1| peptide chain release factor 1 [Burkholderia sp. 383]
 gi|119361516|sp|Q39K18|RF1_BURS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77965818|gb|ABB07198.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia sp.
           383]
          Length = 360

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 257/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S       +D Y KLT E+A + P++ + +++ Q + 
Sbjct: 1   MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++G    D  +RD A+ E+ +  + +  LE E+  +LLPKD +D+++  LEIR
Sbjct: 61  DETAAQELLG----DLSMRDFAEDEIRSARESMSRLETELQKMLLPKDPNDERNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE ++ G +D++I+ L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEALMDGDLDELISALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|84503529|ref|ZP_01001580.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597]
 gi|84388019|gb|EAQ01067.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597]
          Length = 349

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 186/354 (52%), Positives = 255/354 (72%), Gaps = 6/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +S  ++  +  RF  +E RM+E      +  L+ EY+ + P+++ I+ ++Q +    + 
Sbjct: 1   MISADRLAQITQRFEYLEARMAEGGG--DFAALSREYSELRPVVATIAAWEQAQTALSEA 58

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      D E+R LA  E+  +  ++ ELE  +   LLPKD  D +  ++EIR GTGG
Sbjct: 59  EGL----RDDPEMRALADEEIQRLRHDLPELEQALQIALLPKDAADSRPAMIEIRPGTGG 114

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RY+  R W+ +V+  ++ + GG KE+VA + G  VF+R+KFESGV
Sbjct: 115 DEAALFAGDLLRMYQRYSEARGWRFQVVELNETELGGIKEVVANVQGENVFARLKFESGV 174

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   +IRIDTMRASG+GGQHVNTTDS
Sbjct: 175 HRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQIDPSEIRIDTMRASGAGGQHVNTTDS 234

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITH+PTGI+V SSEKSQHQNR  AM+VLR RL+D+ER++ A+ R+A+RK Q+G+GDR
Sbjct: 235 AVRITHVPTGIVVVSSEKSQHQNRAIAMQVLRTRLFDLERQKAADARAADRKAQVGTGDR 294

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLY+L+ V+QG +D++I+ L   HQA ++    
Sbjct: 295 SERIRTYNFPQGRVTDHRINLTLYRLDQVMQGDLDEVIDALTADHQAMLMAEME 348


>gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 362

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 166/355 (46%), Positives = 247/355 (69%), Gaps = 7/355 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ E++  + +   +   D +  L++EY+ +  +      Y Q + +      
Sbjct: 8   KLETLEERYEEVQHLLGDPSVISDQDKFRSLSKEYSQLEEVTKCFQAYKQAQDDLAAAEE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D+E+R++AQ E+   + EI  LE+E+  LL+PKD +D+++C LEIRAG GG E
Sbjct: 68  MANE--DDAEMREMAQEEIKEAKAEIERLEDELQVLLIPKDPNDERNCFLEIRAGAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A +F GDLFRMY RYA  R W++EV+S++D + GGYKE++A ++G G +  +KFESG HR
Sbjct: 126 AGIFAGDLFRMYSRYAERRGWRIEVMSANDAEHGGYKEMIAKVTGDGAYGVLKFESGGHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GRVHTSA TVAVLPE  E +  +I   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 186 VQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINPSDLKIDTYRSSGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E ++   E ++ R+  +GSGDR
Sbjct: 246 IRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYN+ QGR++DHRI LT+Y+L  V++G +D +I P+L  +QA  + + +E
Sbjct: 306 SDRIRTYNYPQGRVSDHRITLTIYRLNEVMEGDVDCLIQPVLVEYQADQLAAMAE 360


>gi|332140922|ref|YP_004426660.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332140929|ref|YP_004426667.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693241|sp|B4RSV6|RF1_ALTMD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|327550944|gb|AEA97662.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550951|gb|AEA97669.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 361

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 258/362 (71%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  RF E++  + +   +   D +  L++E++ +  +++  + Y Q ++
Sbjct: 1   MKESVVRKLEHLVERFEEVQALLGDPEVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  ++ +   D+E+R++AQ E+   + EI  LE E+  LLLPKD +DD +C LEIR
Sbjct: 61  NLASAQEMLNE--DDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  R W+VE++++++++ GGYKE+VA +SG GV+  +K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAESRGWRVELVNANESEHGGYKEVVANVSGDGVYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E + ++I   ++RIDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVAVLPEIPESEAIEINPAELRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM VL+ARL  +E ++ A E ++ RK 
Sbjct: 239 VNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLT+Y+L+ V++G +  +++P+L  HQA ++ S 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTIYRLDEVVEGDLKQLVDPILQEHQADLLASL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|307244007|ref|ZP_07526126.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
           17678]
 gi|306492531|gb|EFM64565.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
           17678]
          Length = 354

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 248/354 (70%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L++++ E+  ++++   +     + KL +E + I PI+ K   Y +  Q   +
Sbjct: 1   MLNKLKVLEDKYKELSQKVADPDIISDQPTWQKLMKETSEIEPIVMKYREYSKASQSIAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD ++R+LA++E+   E  + E ENE+  LL+PKD +D+K+ I+EIR G G
Sbjct: 61  SKQIL-EEESDEDLRELAKMELSESEALLEEYENELKILLVPKDPNDEKNVIIEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  R WK  ++SS++   GGYKE+   I G+G +SR+K+ESG
Sbjct: 120 GDEAALFAGDLFRMYSRYAERRGWKTSLMSSNETGVGGYKEVSFMIKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE+ GR+HTS ATVAVLPE  ++++DI  ED+R+D  RASG+GGQ VNTTD
Sbjct: 180 VHRVQRIPTTESGGRIHTSTATVAVLPEVEDVEIDINPEDVRVDVFRASGNGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG +V    EKSQ +N+ +AMKVL+ARLYD        + +A RK Q+G+G
Sbjct: 240 SAVRLTHIPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQQKDIAAERKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGR++DHRINLTLYKL+  + G +D++I+ L+T  Q + + S
Sbjct: 300 DRSERIRTYNFPQGRVSDHRINLTLYKLDSFIDGDLDEMIDALITVDQTEKMSS 353


>gi|313672261|ref|YP_004050372.1| bacterial peptide chain release factor 1 (brf-1) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 356

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 161/358 (44%), Positives = 254/358 (70%), Gaps = 7/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              H  + ++  ++ E+  ++++   +     Y +L++E++ + PI+ K   Y   ++  
Sbjct: 1   MFDH--LEEVLEKYNELTEKLADPNVMSDIKVYQQLSKEHSDLKPIVEKYLEYKDVQRSI 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++   ++ D   D ++ +LA+IE+   ++++ ++  E+  LLLPKD  D+K+  +EIRAG
Sbjct: 59  KEAEAILKD-GGDKDLIELAEIELAEGKEKLEKISEELKILLLPKDPFDEKNIYIEIRAG 117

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG E+ALF  DL RMY RYA    WK E++ +++   GGYKE++  + G+  +S++K+E
Sbjct: 118 TGGEESALFAADLLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYSKLKYE 177

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           +G HRVQR+P TE+SGR+HTSA TVAV+PEA ++DV I  +D+RID  R+SG+GGQHVNT
Sbjct: 178 AGGHRVQRIPETESSGRIHTSACTVAVIPEADDVDVHIDPKDLRIDVYRSSGAGGQHVNT 237

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIPTGI+V    E+SQ +N+ +AMK+L+++++++E +R   E++ NRK Q+G
Sbjct: 238 TDSAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQAENRKQQVG 297

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF Q R+TDHRINLT+Y L+ V++G +D+II+ L+T  QA+ + +  
Sbjct: 298 SGDRSERIRTYNFPQNRLTDHRINLTVYNLDMVMEGELDEIIDALITYDQAEKLKNIG 355


>gi|54309994|ref|YP_131014.1| peptide chain release factor 1 [Photobacterium profundum SS9]
 gi|61214628|sp|Q6LNB4|RF1_PHOPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46914433|emb|CAG21212.1| putative peptide chain release factor A [Photobacterium profundum
           SS9]
          Length = 362

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ EI+  + +   +   + +  L++EY+ +  I      Y   K 
Sbjct: 1   MKSSILVKLETLVERYEEIQHLLGDPGIIGDQNKFRALSKEYSQLEDITQCFQAYLGAKD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  D   D E+R++AQ EV   +  I  LE+E+  LL+PKD +DD++C +EIR
Sbjct: 61  DLEAAEEMAKD--DDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY RYA  R W++EV++ + ++ GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMPEVPEAEIPEINTGDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E ++   E ++ R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARITKAEEEKRHAEEASTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRI LTLY+L  V++G +D +I P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRITLTLYRLNEVMEGDMDSLIQPVIQEHQADELAAM 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|269138757|ref|YP_003295458.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|267984418|gb|ACY84247.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|304558750|gb|ADM41414.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60]
          Length = 360

 Score =  289 bits (738), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 247/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++  +   D +  L+ EYA ++ +      + Q + +      
Sbjct: 8   KLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLDWRQVQDDLATAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+ A    + +LE  +  LLLPKD DD++ C LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEEIKAARGRLADLEQHLQILLLPKDPDDERDCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W++E++S+S+ + GGYKE++A +SG G + R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIAKVSGDGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+P   E +   I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQEVASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R+RTYNF QGR+TDHRINLTLY+L+ V++G +D++I P++  HQA  + + +E
Sbjct: 304 SDRVRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDNLIEPIVQEHQADQLSALAE 358


>gi|261209906|ref|ZP_05924207.1| peptide chain release factor 1 [Vibrio sp. RC341]
 gi|260841092|gb|EEX67617.1| peptide chain release factor 1 [Vibrio sp. RC341]
          Length = 362

 Score =  289 bits (738), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|258621065|ref|ZP_05716099.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|258626137|ref|ZP_05720985.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|262170842|ref|ZP_06038520.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
 gi|258581492|gb|EEW06393.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|258586453|gb|EEW11168.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|261891918|gb|EEY37904.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
          Length = 362

 Score =  289 bits (738), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|75674575|ref|YP_316996.1| peptide chain release factor 1 [Nitrobacter winogradskyi Nb-255]
 gi|119361570|sp|Q3SVP7|RF1_NITWN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74419445|gb|ABA03644.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           winogradskyi Nb-255]
          Length = 358

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 198/356 (55%), Positives = 259/356 (72%), Gaps = 2/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L   ++  L  R A +E  +    S D Y+++T E A ++PI+  +  +     E   +
Sbjct: 1   MLPEAKLDLLLARHAALESELLSHVSADRYVQMTRELAELNPIVDAVKNWRAVTAEIAGI 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I D  +D+E+R +A+ E  A+E    EL  +I   LLPKD  D+++ +LE+RAGTGG
Sbjct: 61  DAMIADPATDAEMRAMAEAERPALEARNDELMQKIRVALLPKDAMDERNVMLEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF GDLFRMYER+AAL+ WKVEV+S+S+   GGYKEIVA + GRG ++RMKFESGV
Sbjct: 121 DEASLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAQVQGRGAYARMKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GRVHTSAATVAVLPEA E+DVDI  +D+RI+TMRA G+GGQHVN T+S
Sbjct: 181 HRVQRVPDTEAQGRVHTSAATVAVLPEAEEVDVDIRPDDLRIETMRAQGAGGQHVNKTES 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITHIPTGI+V+    +SQH+NR  AM +LR+R+YD ER+R+   RSA+RK Q+GSGD
Sbjct: 241 AIRITHIPTGIVVSMQDSRSQHKNRASAMNILRSRIYDAERQRINAARSADRKDQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQA  + +  
Sbjct: 301 RSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQAAQLAAEG 356


>gi|255037851|ref|YP_003088472.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
 gi|254950607|gb|ACT95307.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
          Length = 357

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 163/356 (45%), Positives = 241/356 (67%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+  ++ +   V     Y K+++EY  +  I+ + ++Y + +++   
Sbjct: 1   MIDKLEAIKERFEEVSQQIIQPEVVSDSTRYSKISKEYKDLGRIVEQYALYQKLQKDIAG 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I     D ++R++A+ E+  +  ++ ELE  I  LL+PKD +D ++ ILEIR GTG
Sbjct: 61  TKELIA-TEKDEDLREMAKEELDDLLPKLEELEQNIKELLIPKDPNDSRNIILEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDLFRMY+R+     W+  V+  ++  +GGYKEI+  + G  V+ +MKFESG
Sbjct: 120 GDEAAIFAGDLFRMYQRFIEKMGWRSSVMDYTEGTNGGYKEIICKVEGEDVYGKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE+ GR+HTSAA+VAVLPEA E+DV I + D+RIDT ++SG+GGQ VNTT 
Sbjct: 180 VHRVQRVPATESQGRIHTSAASVAVLPEAEEVDVQINMNDVRIDTFQSSGAGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIP+G++V    E+SQ +N+ RA+ VLR+RLY++E K+  +  S+ RK  +GSG
Sbjct: 240 SAVRLTHIPSGLVVSCQDERSQLKNKDRALSVLRSRLYEIELKKHNDAISSQRKSMVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS++IRTYN+ Q RITDHRI  T+Y L  V++G I D+I  L  A  A+ +    
Sbjct: 300 DRSDKIRTYNYPQSRITDHRIGYTVYNLPAVMEGDIADLIEKLRIAENAERMQEGE 355


>gi|145634872|ref|ZP_01790579.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
 gi|145267738|gb|EDK07735.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
          Length = 361

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 258/362 (71%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  +SG GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 298 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVINGKIDELIQPIITEYQADQLAAL 357

Query: 356 SE 357
           SE
Sbjct: 358 SE 359


>gi|167564255|ref|ZP_02357171.1| peptide chain release factor 1 [Burkholderia oklahomensis EO147]
 gi|167571406|ref|ZP_02364280.1| peptide chain release factor 1 [Burkholderia oklahomensis C6786]
          Length = 360

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 182/362 (50%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S       +D Y KLT E+A I P++   + + Q + 
Sbjct: 1   MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++G    D+ +RD A+ E+    + +  L  E+  +LLPKD +D+++  +EIR
Sbjct: 61  DELAAQELLG----DASMRDFAEDELRGARERMGRLAAELQTMLLPKDPNDERNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|302875888|ref|YP_003844521.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
 gi|307689321|ref|ZP_07631767.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
 gi|302578745|gb|ADL52757.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
          Length = 358

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 167/356 (46%), Positives = 244/356 (68%), Gaps = 4/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+ +++S+   +     + KL +E++ +  +++K   Y +  ++ +D
Sbjct: 1   MLERLNFIENKYDELSIKISDPSIMSNQKEWQKLCKEHSDLGIVVNKYKEYKKTIEDIED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D + D E+++LA  E+  +E    + E E+  LLLPKD +DDK+  +EIRAG G
Sbjct: 61  NKEMIQDGSLDPELKELASEEIKELEILKNKYEEELRILLLPKDPNDDKNVYVEIRAGAG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA     +VE +S +  D GG KEIV  I G G +S++K+ESG
Sbjct: 121 GEEAALFANNLTRMYARYAETHGCRVETISINPTDLGGIKEIVMMIKGTGAYSKLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVA++PE  +++++I   D+RID  RASG GGQ VNTTD
Sbjct: 181 VHRVQRVPDTESSGRIHTSTATVAIMPEVDDVEIEISANDLRIDVFRASGHGGQCVNTTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+V    EKSQ +N+ +A+ VL+ARL++      +   + +RK Q+G+G
Sbjct: 241 SAVRITHLPTGIVVSCQDEKSQLKNKEKALNVLKARLFEKAESERSASIAEDRKSQVGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+TDHRI LTLYKL+  L G ID++IN L+T  QAK + +  
Sbjct: 301 DRSERIRTYNYPQGRVTDHRIGLTLYKLDSFLDGAIDEVINALITEDQAKKMEAMG 356


>gi|91785343|ref|YP_560549.1| peptide chain release factor 1 [Burkholderia xenovorans LB400]
 gi|119361518|sp|Q13TU2|RF1_BURXL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91689297|gb|ABE32497.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           xenovorans LB400]
          Length = 360

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S      ++D Y KLT E+A + P++   +++ Q   
Sbjct: 1   MKTSMQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+ +RD A+ E+ A  + + +L  E+  +LLPKD +DD++  LEIR
Sbjct: 61  DAATAQELLA----DASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA   +W+VE++S+S++D GGYKE++  I+G   +S++K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+L+ ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|315634081|ref|ZP_07889370.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
           33393]
 gi|315477331|gb|EFU68074.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
           33393]
          Length = 360

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 256/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + ++  +   D +   ++EY+ +  ++   S ++Q   
Sbjct: 1   MKPSIINKLDSLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKSFSRWNQLNA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + E+ ++E  +  LLLPKD +D+ +C LEIR
Sbjct: 61  NLEEAQLLL----DDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W++EVLS ++++ GG+KEI+A +SG G + ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAETKRWRIEVLSENESEQGGFKEIIALVSGDGAYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG++V    E+SQH+N+ +A+ VL +RL   E++++  E++  R+ 
Sbjct: 237 INKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLEQEQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G IDD+I P++T +QA  + + 
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|32171519|sp|Q888C1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 360

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++      + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPKTESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    A+  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAASAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|307544472|ref|YP_003896951.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
 gi|307216496|emb|CBV41766.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
          Length = 363

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 171/363 (47%), Positives = 249/363 (68%), Gaps = 8/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++     RF E+   +++   +     +   + EYA +  +++    Y   ++
Sbjct: 1   MKASLRQRLDTFAERFEELAALLADPEVIADQPRFRDYSREYAELDDLVAAWRDYRAVEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +   ++  D   D+E+R+LA +E  +  +++  LE  +  LL+P+D DD  +  LEIR
Sbjct: 61  DIEAAESLADDA--DAEMRELASMERESGREKLEALETRLKQLLVPRDPDDAGNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA L  WKVE++S+S  D GGYKE+++ + G GV++R+K
Sbjct: 119 AGTGGDEAALFAGDLFRMYSRYAELHGWKVEIVSASHGDQGGYKELISRVKGEGVYARLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEAAE+ ++DI   ++R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEAAEVGEIDIDPNELRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+P+G++V    E+SQH+NR +AM +L ARL    +     +++  R+ 
Sbjct: 239 VNTTDSAIRITHLPSGVVVECQEERSQHKNRAKAMSLLAARLKQAAQDSQRQQQADERRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGS 354
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  +D++I PL+  +QA+ + +
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLSDVVGGEGLDEVIEPLINEYQAEQLAA 358

Query: 355 ASE 357
             +
Sbjct: 359 LQQ 361


>gi|83720975|ref|YP_443437.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|167582488|ref|ZP_02375362.1| peptide chain release factor 1 [Burkholderia thailandensis TXDOH]
 gi|257137781|ref|ZP_05586043.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|119361517|sp|Q2SUG2|RF1_BURTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83654800|gb|ABC38863.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
          Length = 360

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 250/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S       +D Y KLT E+A I P++   + + Q + 
Sbjct: 1   MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+ E+    + +  L  E+  +LLPKD +D+++  +EIR
Sbjct: 61  DELAAQELLA----DASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|154246564|ref|YP_001417522.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
 gi|226739122|sp|A7IIM2|RF1_XANP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154160649|gb|ABS67865.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
          Length = 360

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 191/350 (54%), Positives = 253/350 (72%), Gaps = 2/350 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L  R AEIE  +S     + Y++L  E++ +SP++ ++      +++ +
Sbjct: 1   MTALPTAKLDQLVARHAEIEAALSRGAEGEEYVRLGREFSDLSPVVEQVRALKDAERDLE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
             + ++ +  +D E+R++A+ EV  ++  I  L   +   LLPKD  D++  ILE+RAGT
Sbjct: 61  GANELLAESAADPEMREMAEAEVERLQDRIEALATAVRLALLPKDAMDERGIILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDL+RMY RYAA + W VE+LS S+   GGYKEIVA + GRG ++R+KFES
Sbjct: 121 GGDEAALFAGDLYRMYTRYAAEKGWSVEILSESEGTMGGYKEIVAALHGRGAYARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE SGR+HTSAATVAVLPEA ++DVDI   D+RID  RA G+GGQHVN T
Sbjct: 181 GVHRVQRVPATETSGRIHTSAATVAVLPEAEDVDVDINEADLRIDVYRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITH+PT  +V    E+SQH+N+ RAM +LRARL D ER++    R+A RK Q+GS
Sbjct: 241 ESAVRITHLPTNTVVAVQDERSQHRNKARAMALLRARLLDDERQKKEAGRAAERKGQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQ 348
           GDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G  +D+II+PLLT HQ
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIAGTALDEIIDPLLTEHQ 350


>gi|224368815|ref|YP_002602976.1| PrfA [Desulfobacterium autotrophicum HRM2]
 gi|223691531|gb|ACN14814.1| PrfA [Desulfobacterium autotrophicum HRM2]
          Length = 391

 Score =  289 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 167/356 (46%), Positives = 237/356 (66%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K R+ ++E  +S+   +   +K     +E+  ++ ++S  + Y    Q+  +
Sbjct: 38  MINKLQGIKERYIKLENLLSDPAVIADQVKYQRCLKEHGELTKVVSAFADYQAVLQQMGE 97

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  D   D +IR++A+ E   +  +   LE+++  LL+PKD  DDK+ ILEIRAGTG
Sbjct: 98  AKDLAKDP--DPDIREMAKEETADLRAQREGLESKLKLLLMPKDPRDDKNVILEIRAGTG 155

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  DLFRMY RYA ++ W V V+ SS +  GG+KE+++ I G G FS  K+ESG
Sbjct: 156 GEEAGLFAADLFRMYSRYAEIKGWTVNVIESSHSSAGGFKEVISMIKGNGAFSAFKYESG 215

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE  GRVHTSA TVAVLPEA ++++ I   ++++D  RASG GGQ VNTTD
Sbjct: 216 THRVQRVPETETQGRVHTSAVTVAVLPEAEDVELKIEPSELKVDVFRASGPGGQSVNTTD 275

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+     EKSQ +N++ A+KVL+AR+ D   +    +R+A RK Q+G+G
Sbjct: 276 SAVRITHLPTGIVATCQDEKSQIKNKIAALKVLKARILDAMVREQEAKRAAQRKGQVGTG 335

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS RIRTYNF QGR+TDHRI LTLY+L+ ++ G I DII+ L T  QA+ +  A+
Sbjct: 336 DRSGRIRTYNFPQGRMTDHRIGLTLYRLDNIMGGDIQDIIDELKTHAQAEALKEAN 391


>gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
 gi|238692126|sp|B3E628|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
          Length = 355

 Score =  289 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 175/355 (49%), Positives = 253/355 (71%), Gaps = 8/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +I DL+ RF E+E  +S+   +     + KL+ E+A ++P+I     Y +   E ++  
Sbjct: 3   DKIQDLEIRFQELESLLSDPTVIANQPEFRKLSREHADLAPLIEAFRRYKKVLDELEENQ 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E++++A+ E+  + +E   L+ EI  LLLPKD +D +  ILEIRAGTGG 
Sbjct: 63  ELLA----DPEMKEMAEEEISRLSQEKERLDAEIKILLLPKDPNDSRDVILEIRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF GDLFRMY R+A   +WKVE+LS S+++ GGYKE++A+I G+ V++++K+ESG H
Sbjct: 119 ESALFSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASIEGQDVYAKLKYESGTH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSA TVA++ EA ++D+DI   D++ID  R+SG+GGQHVNTTDSA
Sbjct: 179 RVQRVPETEAQGRIHTSACTVAIMAEAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSA 238

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG +V    E+SQ +NR +AMKVL+ R+ D  ++    + +A+RK Q+GSGDR
Sbjct: 239 VRITHIPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIQQEQNAKLAADRKQQVGSGDR 298

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLY+L+ ++ G I++I + L   +Q + + + SE
Sbjct: 299 SERIRTYNFPQGRMTDHRIGLTLYRLDSIMAGDIEEITDALRAHYQMEALKAQSE 353


>gi|288942095|ref|YP_003444335.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
 gi|288897467|gb|ADC63303.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
          Length = 359

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 176/360 (48%), Positives = 244/360 (67%), Gaps = 9/360 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +  RF E+   ++E  +      +  L+ EYA + P++     Y   ++
Sbjct: 1   MTPSIRAKLERIAERFGEVMALLAEPETQSDQGRFRDLSREYAQLQPLMECYERYRDAER 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    +D E+  LA+ E+ A  + +  LE E+  LL+P D +D  +  LEIR
Sbjct: 61  DLAAAEELL----TDPEMAALARDEIEAARERLDVLEPELQTLLIPPDPNDQCNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG+EAALF GDL RMY RYA L  W+ E +S+S+ + GGYKE+V  +SG GV+SR+K
Sbjct: 117 AGTGGAEAALFAGDLMRMYMRYAELLGWRTEQVSASEGELGGYKEVVIRVSGSGVYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FE G HRVQRVP TE+ GR+HTSA TVAVLPEA  ID ++I   D+RIDT R+SG+GGQH
Sbjct: 177 FEPGAHRVQRVPETESQGRIHTSACTVAVLPEAESIDAIEINSNDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR +AM +L A+L    R+  A+E+S +RKL
Sbjct: 237 VNKTDSAIRITHLPSGIVVECQEERSQHKNRAKAMSLLHAKLLAGARETQASEQSESRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+GSGDRSERIRTYNF Q R+TDHRINLTLYKL+ V+ G +D +I PLL  ++A+ + + 
Sbjct: 297 QVGSGDRSERIRTYNFPQNRLTDHRINLTLYKLDEVMTGQLDQVIEPLLAEYRAEQLAAM 356


>gi|52082235|ref|YP_081026.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|52787627|ref|YP_093456.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|319648109|ref|ZP_08002326.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
 gi|81608865|sp|Q65DV1|RF1_BACLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52005446|gb|AAU25388.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|52350129|gb|AAU42763.1| PrfA [Bacillus licheniformis ATCC 14580]
 gi|317389744|gb|EFV70554.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
          Length = 356

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 162/356 (45%), Positives = 241/356 (67%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ ++   +S+   V+   KL   ++E + +   +     Y    ++  D
Sbjct: 1   MLDRLKSIEDRYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRRYRSASEQLSD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   DS++R++ + E+  +++EI  L +++  LL+PKD +DDK+ I+EIR   G
Sbjct: 61  AKAML-EEKLDSDMREMVKEEISELQEEIESLTDQLKVLLIPKDPNDDKNVIMEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+L+RMY RYA L+ WK EV+ ++    GGYKEI+  I+G G +SR+K+E+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEANMTGTGGYKEIIFMINGNGAYSRLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVA LPEA E++VDI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E   NRK  +G+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQNRKSAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D++I+ L+   QA  +  A 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIVEDQASKLQQAE 355


>gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
 gi|189039985|sp|B0KNE4|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
          Length = 360

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EYA + P+ +    + + + 
Sbjct: 1   MKASLLNKLDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWCKVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++  LE+++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W++E+LS ++ + GGYKEI+A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPE  E   ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR RAM  L A+L D++     N  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLY L+ +L G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVEAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189039973|sp|B0TX37|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 361

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 257/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   + E+  +   + +  L++EY+ + PI+     Y Q  +
Sbjct: 1   MKDSIKAKLQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVMAFKEYTQALE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +++  + ++ +   D+E+ ++A+ E+ +  + I  LE+E+  LLLP+D +DD +  LEIR
Sbjct: 61  DKEAAYEMLNEK--DAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF+MY +YA  R WK+EV+S+S+ + GGYKEI++ I G GV+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PEA E++ +DI   DI++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR  AM +L+++L   E  +   E+S  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G +D II PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQADLLATM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|311109118|ref|YP_003981971.1| peptide chain release factor [Achromobacter xylosoxidans A8]
 gi|310763807|gb|ADP19256.1| peptide chain release factor 1 [Achromobacter xylosoxidans A8]
          Length = 360

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E++  ++E      +D + KL+ E A + P++   + + + + 
Sbjct: 1   MKSSMRSRLEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFARTED 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    SD +++ +A+ E+ +   ++ ELE  +  LLLP+D +D +S  LEIR
Sbjct: 61  DLAAAQEML----SDPDLKSMAEDEIKSGRAKLEELEAALQLLLLPRDPNDGRSLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  R W+VE++S S ++ GGYKE++A I G G + R+K
Sbjct: 117 AGTGGDESALFSGDLLRMYTRYAEQRGWRVELMSESASELGGYKEVIARIDGDGAYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVA++ EA E+    I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATEAQGRIHTSACTVAIMAEADEMSEIVINPNDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    ++SQH+N+ +AM+VL ARL D E +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQSKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G ++++   L+  HQA+ + + 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQAEQLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|254438684|ref|ZP_05052178.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
 gi|198254130|gb|EDY78444.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
          Length = 344

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 191/346 (55%), Positives = 252/346 (72%), Gaps = 4/346 (1%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +  RF  +E RM E    DA++ ++ EYA + P++  +  Y    +E +    ++    
Sbjct: 2   QITERFEFLEARMGEGLGGDAFVSVSREYAELRPVVEVVRHYQDLTEEIEGAQAML---- 57

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           SD E+++LA++E+  + + + + E  +   L+PKD  D K  +LEIR GTGG EAALF G
Sbjct: 58  SDPEMKELAEMELPQLRERLPDAEAAVKLALIPKDAADGKPALLEIRPGTGGDEAALFAG 117

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           DL RMY+RYA  R W  E+L  S ++ GG KE+ A I+G  VF+RMK+ESGVHRVQRVP 
Sbjct: 118 DLLRMYQRYAESRGWTFEILEESQSELGGIKEVTARIAGNNVFARMKYESGVHRVQRVPE 177

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TE+ GR+HTSAATVAVLPEA ++D+ I   DIRIDTMRASGSGGQHVNTTDSAVRITH+P
Sbjct: 178 TESGGRIHTSAATVAVLPEAEDVDIQINANDIRIDTMRASGSGGQHVNTTDSAVRITHMP 237

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           +GI+VTSSEKSQH+NR  AM+VL+ RLYD ER+++ +ERSA+R  Q+GSGDRSERIRTYN
Sbjct: 238 SGIVVTSSEKSQHRNREIAMQVLKTRLYDAERQKVHDERSADRAAQVGSGDRSERIRTYN 297

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           F QGR+TDHRINLTLYKL+ +LQG +D++I+ L+   QA  +    
Sbjct: 298 FPQGRMTDHRINLTLYKLDAILQGDLDEVIDGLIQDAQASALAEMG 343


>gi|317130773|ref|YP_004097055.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
 gi|315475721|gb|ADU32324.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
          Length = 357

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 246/355 (69%), Gaps = 4/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+  +   + +   +    KL   ++E + I   +     Y + K++  D  
Sbjct: 3   DRLEAVEERYERLNELLMDPDVISDTKKLRDYSKEQSDIEETVQTFREYKEIKKQYTDAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           T++ + + D E+ ++ ++E+  +E +I  LE ++  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  TMLKEEDLDDEMYEMVKMEMDELEDQIPPLEEKLRVLLLPKDPNDDKNVIVEIRGAAGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + W+ EV+ +S+ND GGYKEI+  I+G+G +S+MK+E+G H
Sbjct: 123 EAALFAGDLYRMYSRYAEAQGWRPEVIEASENDIGGYKEIIFMINGKGAYSKMKYENGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++VDI  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 183 RVQRVPTTESGGRIHTSTATVAVLPEAEEVEVDINEKDIRVDTFASSGPGGQSVNTTMSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTG++V    EKSQ +N+ +AMKVLRAR+YD  RK    E + NRK  +G+GDR
Sbjct: 243 VRLTHIPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFRKEAEAEYAQNRKSAVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF Q R+TDHRI LTL KL+ +L+G +D+I + L+   Q++M+  A E
Sbjct: 303 SERIRTYNFPQSRVTDHRIGLTLQKLDQILEGKLDEITDALIVEEQSRMMEEAGE 357


>gi|227824241|ref|ZP_03989073.1| peptide chain release factor [Acidaminococcus sp. D21]
 gi|226904740|gb|EEH90658.1| peptide chain release factor [Acidaminococcus sp. D21]
          Length = 359

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 167/357 (46%), Positives = 244/357 (68%), Gaps = 5/357 (1%)

Query: 3   FLSH-KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQE 58
              H  ++  L++R+ ++E ++S+   +     + K T+ +A ++ ++     Y + ++ 
Sbjct: 1   MFEHLDKLQALEDRYIDLEAKISDPSVISDQAQWQKYTKAHAKLTDVVETYRAYQKLQKT 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             D   ++    SD E+  +A++E+  +  ++ + E  +  LLLPKD +D+K+ I+EIRA
Sbjct: 61  YDDDQALLEMGESDEELAAMAEMEMKELAPQLEDYEKRLTILLLPKDPNDEKNIIMEIRA 120

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG EAALF GDLFRMY RYA  + W+VE++ SS    GG+KE++  +SG  V+S MKF
Sbjct: 121 GAGGDEAALFAGDLFRMYTRYAETKGWRVELMDSSPTGLGGFKEVIFMVSGSDVYSHMKF 180

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESGVHRVQRVP TEA GR+HTS ATVAV+PEA E+DVDI + DIRIDT RA G+GGQ+VN
Sbjct: 181 ESGVHRVQRVPETEAQGRIHTSTATVAVMPEAEEVDVDIKMSDIRIDTYRAGGAGGQYVN 240

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T+SAVR+THIPTGI+     EKSQ +NR + ++VLR+R+Y+  ++       + R+ Q+
Sbjct: 241 KTESAVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRIYEAAQEAQRAAEESERRSQV 300

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           G+GDRSERIRTYNF QGR+TDHRI LTL+KL  V+ G +D+++  L+T  Q K +  
Sbjct: 301 GTGDRSERIRTYNFPQGRVTDHRIGLTLHKLTDVMNGDLDELLGALMTEEQTKKLQQ 357


>gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 360

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++      + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM  L A+L D +    A+  ++ RKL
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAASAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|257092416|ref|YP_003166057.1| peptide chain release factor 1 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044940|gb|ACV34128.1| peptide chain release factor 1 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 360

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 171/356 (48%), Positives = 250/356 (70%), Gaps = 9/356 (2%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L  R  E++  ++       +D Y +L+ E+A I+P+++   I+ + + +     
Sbjct: 7   DKLEHLTGRLDELDRMLASGDATRDMDEYRRLSREHAEIAPVVALYQIWSRTRSDLAAAL 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G    D E+R+LA+ EV A ++ + ++E ++  LLLP+D  D+++  LEIRAGTGG 
Sbjct: 67  DMVG----DPEMRELAEAEVAASKERLPQIEKDLQKLLLPRDAKDERNVFLEIRAGTGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF G+LFRMY RYA  R+W+VEV+S+S +D GGY+EI+A I G  V++R+KFESG H
Sbjct: 123 ESALFAGNLFRMYTRYAERRRWQVEVISASASDLGGYREIIARIIGSDVYARLKFESGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEA GR+HTSA TVAV+PEA    +V +   DIRIDT RASG+GGQH+N TDS
Sbjct: 183 RVQRVPDTEAQGRIHTSACTVAVMPEADALEEVQVNPADIRIDTYRASGAGGQHINKTDS 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG++V    ++SQH+N+ +AM VL AR+ D++ +      ++ R+  +GSGD
Sbjct: 243 AVRITHLPTGVVVECQDDRSQHKNKAQAMSVLVARIRDMQEREQDASIASERRSLVGSGD 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGR+TDHRINLTLYK++ ++ G +D+++  L   HQA  +   +E
Sbjct: 303 RSERIRTYNFPQGRVTDHRINLTLYKIDAIMDGDLDELLGALTAEHQADQLAMLAE 358


>gi|163803585|ref|ZP_02197452.1| peptide chain release factor 1 [Vibrio sp. AND4]
 gi|159172627|gb|EDP57484.1| peptide chain release factor 1 [Vibrio sp. AND4]
          Length = 362

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q + 
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTQCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLAAAEDMANE--DDEEMREMAQEEIKEAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++EV+SS++++ GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNESEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA T+AV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTLAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E +R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLTLY+L  V++G +  +I+P++  H A  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTLYRLNEVMEGDLQSLIDPVVQEHHADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 356

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 180/358 (50%), Positives = 247/358 (68%), Gaps = 9/358 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             K++  L  R  E+   +S       +D Y K++ E+A I+PI+ +   Y+Q + + ++
Sbjct: 1   MLKKLATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            H ++     D E++  AQ E+ A +  + E+   +  LLLPKD +D+++  LEIRAGTG
Sbjct: 61  AHAMLA----DPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E+ALF GDLFRMY RYA  ++WKVEV+S+S+++ GGYKEI+A I G G +S++KFESG
Sbjct: 117 GDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HRVQRVP TE  GR+HTSA TVAVLPE  E  DV I   DIRIDT RASG+GGQH+N T
Sbjct: 177 GHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKT 236

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH PTGI+V     +SQH N+ +AM+VL AR+   +     ++ ++ R+  IGS
Sbjct: 237 DSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVNEQQSKIASERRSLIGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYN+ QGRITDHRINLTLYK++ + +G +D++IN L   HQA ++ +  E
Sbjct: 297 GDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELINALANEHQADLLATLGE 354


>gi|330445230|ref|ZP_08308882.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489421|dbj|GAA03379.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 362

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +       + +  L++EY+ +  +      Y Q K+
Sbjct: 1   MKQSILVKLETLVERYEEVQHLLGDPDVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+   + EI  L +E+  LLLPKD +DD++C +EIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQEEIKEAKAEIERLADELQVLLLPKDPNDDRNCFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W+VEV+S +  + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAERRGWRVEVISENRAEQGGYKEMIAKVNGDGAYGILK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAVLPE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVLPEVPEAEIPEINTGDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E ++   E ++ R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRI LTLY+L  V++G +D +I P+L  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRITLTLYRLNEVMEGDLDALIQPVLQEHQADQLAAM 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|331270451|ref|YP_004396943.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
 gi|329127001|gb|AEB76946.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
          Length = 357

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 174/356 (48%), Positives = 248/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++   +N++ E+ +++S+   +   + + KL +E+A +  I++K   Y   K+E   
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELVA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ + N D +++++ Q E+  +E+ I   E E+  LLLPKD +DDK+  +EIRAG G
Sbjct: 61  NKELLSEEN-DRDMKEMIQEEIKTLEESIVSDEEELKILLLPKDPNDDKNVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA    WK E++S+++ D GG+KE+V  + G   +S+MKFESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D+ I   DIRID  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRIDVFRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    EKSQ +N+ +A+KVL+ARLY+      A   SA+RK Q+G+G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAERAASISADRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+T+HRI +TLYKL+  L G +++II+ L+TA QA+ + +  
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGVTLYKLDAFLDGDMEEIIDALITAEQAEKMKAMG 355


>gi|299065550|emb|CBJ36721.1| peptide chain release factor RF-1 [Ralstonia solanacearum CMR15]
          Length = 356

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 173/359 (48%), Positives = 245/359 (68%), Gaps = 11/359 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++  L  R  EI   ++      ++D Y KLT E+A I P++++ + + Q + + 
Sbjct: 1   MLS--KLDQLAERTVEINALLAREDATANLDQYRKLTREHAEIEPVVAQYAAWKQAEDDV 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                ++     D +++  A+ E+ A  + +  LE E+  LLLPKD +D ++  LEIRAG
Sbjct: 59  TTAQELLA----DPDMKAFAEDEIRAAREHMTTLEAELQRLLLPKDPNDHRNIFLEIRAG 114

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  + G G +SR+KFE
Sbjct: 115 TGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFE 174

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVN 238
           SG HRVQRVPATEA GR+HTSA TVAV+PEA    D+ I   D+RIDT RASG+GGQH+N
Sbjct: 175 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHIN 234

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVR+TH+PTG++V    ++SQH+N+ RAM+VL ARL D + +    + ++ RK  I
Sbjct: 235 KTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLI 294

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GSGDRS+RIRTYNF QGRITDHRINLTLYK++ ++ G + +++  L   HQA+ + +  
Sbjct: 295 GSGDRSDRIRTYNFPQGRITDHRINLTLYKIDALMDGDLGELLGALAAEHQAEQLAALG 353


>gi|302381433|ref|YP_003817256.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192061|gb|ADK99632.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 367

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 187/353 (52%), Positives = 251/353 (71%), Gaps = 4/353 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++  + +RF ++E RM  +      ++L++E+A + P+   +    + + E ++L 
Sbjct: 15  LPQSKLDQVLDRFHQVEARMGAASDGQEIVRLSKEHAEMKPVADAVLALAKARTEIEELQ 74

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +      D E+  +   E+  +   + E+E ++  LL P+D D++ S +LE+RAGTGG 
Sbjct: 75  AMTA----DPEMAAMVADELETLNARLPEMERDVALLLAPRDADENASAVLEVRAGTGGD 130

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA+ R WKVE+ S+++ D GGYKEI+AT++G GVF R+KFESGVH
Sbjct: 131 EAALFAGDLFRMYSRYASTRGWKVELDSATEGDAGGYKEIIATVTGDGVFGRLKFESGVH 190

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSAATVAVLPE  ++++DI  +DIRIDT RASGSGGQHVN TDSA
Sbjct: 191 RVQRVPTTEAGGRIHTSAATVAVLPEVEDVEIDIQDKDIRIDTYRASGSGGQHVNKTDSA 250

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH P+GI+VTSSEKSQH NR +AMK LR RLYD++R+   N RS  RK Q+GSGDRS
Sbjct: 251 VRITHFPSGIVVTSSEKSQHVNRDKAMKNLRVRLYDMQRQMKDNARSDARKSQVGSGDRS 310

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF QGR+TDHRI LTL+ L  +L+G +D ++N L+   QA  +    
Sbjct: 311 ERIRTYNFPQGRVTDHRIGLTLHSLPQILEGDLDALLNALIAEDQAARLSDLE 363


>gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas
           arsenicoxydans]
          Length = 361

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 252/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+ + + +     ++D Y K+T E+A + P+++    Y Q   
Sbjct: 2   MKPSMLAKLDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADN 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +D   ++    SD ++++ AQ E+ A +  + +LE ++  +LLPKD +D+++  LEIR
Sbjct: 62  DIKDAQGML----SDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A   +W++E++S S ++ GGYKE++  I G G +S++K
Sbjct: 118 AGTGGDESALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA E  DV+I   D+RIDT RASG+GGQH
Sbjct: 178 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTGI+V    ++SQH+N+  A+KVL AR+ DV+ +   ++ +A RK 
Sbjct: 238 INKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSQEAATRKS 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL++++ G + ++ N L   HQA ++ + 
Sbjct: 298 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQADLLAAL 357

Query: 356 SE 357
            +
Sbjct: 358 GD 359


>gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
 gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
          Length = 357

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 175/355 (49%), Positives = 251/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF E+   ++E         + KL +E   + PI+     Y + K+  +D  
Sbjct: 3   DKLEDLLIRFEELLNELNEPGVASDPAHFQKLMKEQGNLQPIVDAYKEYKECKKTVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+R++ + E+   +  I ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  AML-DGESDEEMREMLKEELNTAKDRIAELETELKILLLPKDPNDDKNVIMEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++R+Y +YA  R+W+VE+L++ +   GG KE+   I+G+G +SR+K+ESGVH
Sbjct: 122 EAALFAAEMYRLYVKYAEKRRWRVELLNADEIGIGGMKEVNFMITGQGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTVTVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI+V + +EKSQ QN+ +A  +LRA+LYD+E+++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVVYSQTEKSQLQNKAKAFALLRAKLYDIEQQKAHDAEAQLRRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYKL+ ++ G ID++++ L+ A QA  + + +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLYKLDSIMDGDIDELLDSLIAADQAAKLTAMNE 356


>gi|254180490|ref|ZP_04887088.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
 gi|184211029|gb|EDU08072.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
          Length = 360

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 248/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S       +D Y KLT E+A I P++   + + Q + 
Sbjct: 1   MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+ E+      +  L  E+  +LLPKD +D+++  +EIR
Sbjct: 61  DELAAQELLA----DASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THI TGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHISTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|332980841|ref|YP_004462282.1| peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1
           BON]
 gi|332698519|gb|AEE95460.1| bacterial peptide chain release factor 1 (bRF-1) [Mahella
           australiensis 50-1 BON]
          Length = 356

 Score =  288 bits (736), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 171/356 (48%), Positives = 254/356 (71%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ ++ +++S+   +     + KL +E++ + PI++K   Y +  +++ D
Sbjct: 1   MLDKLDSIEERYEQLSVKISDPEVISQQDMWRKLVKEHSDLEPIVTKYREYKEVVRQKDD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +  +I +   D+E+++LAQ E+  +++   +LE E+  LLLPKD +D+++ I+EIRAG G
Sbjct: 61  VLAMIKET-GDAELKELAQQELDELKEREDKLEEELKRLLLPKDPNDERNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY  YA  R WK+EV+ S+  D GG KEIV  + G+G +SR+K+ESG
Sbjct: 120 GEEAALFAANLFRMYSLYAESRGWKIEVMDSNYTDLGGIKEIVFAVEGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+HTS ATVAVLPEA E++V+I   D+RID  R++G GGQ VNTTD
Sbjct: 180 VHRVQRVPVTEAGGRIHTSTATVAVLPEAEEVEVEINPNDLRIDVYRSTGHGGQSVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG++V    EKSQ +N+ +AM+VL++RL  + +     + +  R+ Q+G+G
Sbjct: 240 SAVRITHIPTGMVVTCQDEKSQLKNKDKAMRVLKSRLLAIAQAEQDAQLAQTRRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LT+Y+LE  L G +D++I+ L+TA QA+ +  A+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTIYQLEAFLNGDMDEMIDALITADQAERLSQAA 355


>gi|113461093|ref|YP_719161.1| peptide chain release factor 1 [Haemophilus somnus 129PT]
 gi|119361547|sp|Q0I3B5|RF1_HAES1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112823136|gb|ABI25225.1| bacterial peptide chain release factor 1 (bRF-1) [Haemophilus
           somnus 129PT]
          Length = 360

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 165/362 (45%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R  E+E  + E   ++    +   ++EYA +  ++   + ++    
Sbjct: 1   MKASIISKLESLKERHEELEALLGEPSVINDQDKFRAYSKEYAQLEDVVKCFARWNWLNN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D +++++A++E+   + EI   E ++  LLLPKD +D+ +  LEIR
Sbjct: 61  NIEETQLLL----DDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VEVL++++++ GGYKEI+  ++G GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+   E++R A  ++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  +   
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAML 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|225374519|ref|ZP_03751740.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
           16841]
 gi|225213757|gb|EEG96111.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
           16841]
          Length = 358

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 237/355 (66%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   +SE    +    + KL +E + I PI+     Y Q KQ  +D  
Sbjct: 3   DKLEDLLIRYEELMSELSEPDVANNPERFRKLMKEQSDILPIVEAYKEYKQCKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + + +       +    A  +    LENE+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  AMLEEESDEEMRELAKEELNDAKNRVAE-LENELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY+ YA  + WK E++   D   GG K +   I+G G +S MK+ESGVH
Sbjct: 122 EAALFAAEIYRMYQHYAETKNWKTEIMECDDTGIGGMKSVTFMITGAGAYSVMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA ++DV I  +DIRID  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEDVDVQIDEKDIRIDVCRASGAGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++ + +EKSQ QN+ +A  +LR +L+D+E+++  +  +  RK QIG+GDR
Sbjct: 242 VRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLFDLEQQKAHDAEAELRKSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRINLTLYKL+ ++ G I +II+  + A QA  + + ++
Sbjct: 302 SEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQAAKLANMNQ 356


>gi|291547175|emb|CBL20283.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
           SR1/5]
          Length = 358

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 245/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF E+   + E    D    + KL +E + + PI+     Y + K+  +D  
Sbjct: 3   DKLDDLLVRFEELLNELGEPGVTDDPAHFQKLMKEQSDLQPIVDAYKEYKKNKETIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ +   D E+R++ + E+   +K + ELE+E+  LLLPKD +D K+ I+EIR G GG 
Sbjct: 63  SML-ESEKDEEMREMLKEELSDAKKRVEELEHELKILLLPKDPNDSKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY +YA  R+WK E+LS ++N  GG+KE+   I G G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIKGEGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA EID  + L + + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTCTVAIMPEAEEIDFHLDLNECKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A++VLR+RLY++E  +  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKALRVLRSRLYEMELAKQHDAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL++LE +L G +D+II+ L+ A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHRLENILNGDLDEIIDSLIAADQAVKLTKLNE 356


>gi|297582072|ref|ZP_06943991.1| peptide chain release factor 1 [Vibrio cholerae RC385]
 gi|297533767|gb|EFH72609.1| peptide chain release factor 1 [Vibrio cholerae RC385]
          Length = 362

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +++P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLVDPVIHEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|262404524|ref|ZP_06081079.1| peptide chain release factor 1 [Vibrio sp. RC586]
 gi|262349556|gb|EEY98694.1| peptide chain release factor 1 [Vibrio sp. RC586]
          Length = 362

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKEAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille]
 gi|166223564|sp|A6SUF6|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 360

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 252/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+ + + +     ++D Y K+T E+A + P+++    Y Q   
Sbjct: 1   MKPSMLAKLDQLTERLDELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYRQADS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + QD   ++    SD ++++ AQ E+ A +  + +LE ++  +LLPKD +DD++  LEIR
Sbjct: 61  DIQDAQGML----SDPDMKEFAQEEIAAAKTRMEQLEIDLQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY R+A   +W++E++S S ++ GGYKE++  I G G +S++K
Sbjct: 117 AGTGGDEAALFAGDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRIIGFGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVA++PEA E  DV+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTGI+V    ++SQH+N+  A+KVL AR+ DV+ +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL++++ G + ++ N L   HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQAELLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|332188246|ref|ZP_08389974.1| peptide chain release factor 1 [Sphingomonas sp. S17]
 gi|332011745|gb|EGI53822.1| peptide chain release factor 1 [Sphingomonas sp. S17]
          Length = 357

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 185/357 (51%), Positives = 260/357 (72%), Gaps = 4/357 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M  +S ++I  ++ R  E++  M+      D ++ +++EYA + P+ +  +   + +QE 
Sbjct: 1   MKTISAERIAQIEARRDELQAMMATGDLPSDRFVAVSKEYAELEPVANAAAEVRRLRQEA 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  +  D   D E+R+LA  E+ A    +   +  +   LLP+D  D+++ +LEIRAG
Sbjct: 61  DSLTFMTQD--GDDELRELAAEELHANRTALAAADRHLALALLPRDAADERAAMLEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY+RYA  + W+VEV+S+S  D GGYKE+VA+++G GVF+++KFE
Sbjct: 119 TGGDEAALFAGDLFRMYQRYAERQGWRVEVISASIPDTGGYKEVVASVAGAGVFAKLKFE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RID  R+SG+GGQHVNT
Sbjct: 179 SGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDLQIDDKDLRIDIYRSSGAGGQHVNT 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSA+RITHIPTG++V    E+SQH+NR +AMKVLR RLY+ ER+R+A ER+  R+  +G
Sbjct: 239 TDSAIRITHIPTGLVVIQQDERSQHKNRAKAMKVLRTRLYEAERERLAAERAGTRRSMVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SGDRSERIRTYNF QGR+TDHRINLTL++L  +L+G +D++I  LL   +A+ + + 
Sbjct: 299 SGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGELDELIGALLAEDEAERLAAL 355


>gi|268592708|ref|ZP_06126929.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
 gi|291311851|gb|EFE52304.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
          Length = 360

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 248/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ EIE  ++++  +   D +  L++EYA +S +    S +   + + +    
Sbjct: 8   KLEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLSDVAKCFSAWRTVQDDIETAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++AQ E+   +    ELE ++  LLLPKD DD+ +C +EIRAG GG E
Sbjct: 68  LL----DDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA   +W+VE++S+SD + GG+KE++A ISG  V+ R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAENNRWRVELMSTSDGEHGGFKEVIAKISGDSVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVA+LPE  E +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQAAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDSLIQPIINEYQADQLSALSE 358


>gi|307823419|ref|ZP_07653648.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96]
 gi|307735404|gb|EFO06252.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96]
          Length = 361

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 256/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L  R+ EI   +SE       + +  L++EYA I+P++     Y Q  +
Sbjct: 1   MKQSIQHKLENLCERYDEIAALLSEPEVQGNQNKFRSLSQEYAQINPLVDCYKRYQQTLE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  +  D  SD E+R++A+ EV   E ++  +E+E+  LLLPKD +D+++  +EIR
Sbjct: 61  SLASAKEMAND--SDPELREMAKEEVNDAENQLEAIEHELQVLLLPKDPNDNRNIFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDL RMY+RYA  + W+ E+++ S  D GGYKE++  ++G+ V+S++K
Sbjct: 119 AGTGGDEAAIFSGDLARMYQRYAERKGWQTEIINESHGDHGGYKEVILRVAGKDVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PE  E+D +DI   D+++DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N T+SA+RITH+PTG++V    E+SQH+NR RAM +L +RL   E+++   E+SA RKL
Sbjct: 239 INKTESAIRITHVPTGVVVECQDERSQHKNRARAMSLLASRLLSAEQEKHHAEQSATRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ ++QG ++ +I PL++ HQA+++   
Sbjct: 299 QVGSGDRSERIRTYNYPQGRLTDHRINLTLYKLDDIMQGGLEQVIQPLISEHQAELLTQL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|71909299|ref|YP_286886.1| peptide chain release factor 1 [Dechloromonas aromatica RCB]
 gi|119361530|sp|Q479R5|RF1_DECAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71848920|gb|AAZ48416.1| bacterial peptide chain release factor 1 (bRF-1) [Dechloromonas
           aromatica RCB]
          Length = 360

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L +R  EI+  +S       +D + KL+ E A + P++ + + + Q + 
Sbjct: 1   MKSSIRQKLELLVDRLDEIDRMLSAPSTASDMDQFRKLSRERAEVEPVVVQFNAFRQAEN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++    SD ++R+ A+ E+ A +  + ELE E+  LLLPKD +D++S +LEIR
Sbjct: 61  DLAEAEAML----SDPDMREFAEEEMAAAKARLPELELELQKLLLPKDPNDERSVLLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF G LFRMY R+A  ++W+VEV+S+S+++ GGY+EI+  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGSLFRMYSRFAERQRWQVEVMSASESELGGYREIICRIAGNGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAV+PE  E  DV++   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPETETQGRIHTSACTVAVMPEVDEVEDVNLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+      +SQH N+  A+KVL AR+ DV+ +      S+ RK 
Sbjct: 237 INKTDSAVRITHLPTGIVAECQDGRSQHANKASALKVLAARIKDVQVRAQQAHISSTRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGRITDHRINLTLYK+  ++ G +D+++  L   HQA ++   
Sbjct: 297 LIGSGDRSERIRTYNFPQGRITDHRINLTLYKIAAIMDGDMDELLGALAAEHQADLLAEL 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|332532477|ref|ZP_08408355.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038120|gb|EGI74567.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 361

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    + ++  L  R+ E++  +S+   +     +  L++EY+ +  I+     Y + + 
Sbjct: 1   MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRALSKEYSELEEIVKTFLNYKETQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ D  SD E+R++AQ E    + +I  +E++I  L+LPKD  D+ +  +E+R
Sbjct: 61  DLASAEEMLKD--SDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  +KWKVEV+S+++ + GGYKE++A ISG GV+ ++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAENKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GRVHTSA TVAV+        + I   D+++DT RASG+GGQH
Sbjct: 179 FESGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+THIPTG++V    ++SQH+NR +AM VL ARL   E ++     ++ R+ 
Sbjct: 239 VNKTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRD 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGRITDHRINLTLY+L  V+ G +  II+PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRITDHRINLTLYRLNEVVAGDLSAIIDPLMQEHQADLLAAM 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|209883257|ref|YP_002287114.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
 gi|229470351|sp|B6JA06|RF1_OLICO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209871453|gb|ACI91249.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
          Length = 358

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 195/353 (55%), Positives = 261/353 (73%), Gaps = 2/353 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L   ++  L  R A +E  +    + +AY++ T E A ++P++  +  Y     E  DL
Sbjct: 1   MLPDAKLDILLARHAALEAELLGQLNAEAYVRATRELAELTPVVDAVKAYRAGASELSDL 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I D  +D+E+R +A+ E   +++    LE +I   LLPKD  D+++ +LE+RAGTGG
Sbjct: 61  DAMIDDPTTDAEMRAMAESERPVLQERQENLEQQIRIALLPKDAMDERNVVLEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF GDLFRMYER+AAL+ WKVEV+S+S+   GGYKEIVA + GRG F+++KFESGV
Sbjct: 121 DEASLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIVAQVQGRGAFAKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEASGR+HTSAATVAVLPEA EID+DI   D+RI+TMRA G+GGQHVN T+S
Sbjct: 181 HRVQRVPDTEASGRIHTSAATVAVLPEAEEIDIDIKDTDLRIETMRAQGAGGQHVNKTES 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITHIPTGI+V     +SQH+NR  AM +LR+R+ D ER+R A+ERSA+R+ Q+GSGD
Sbjct: 241 AIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRILDAERQRAASERSADRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIG 353
           RSER+RTYNF QGR+TDHRINLTLYKL  V+ G  ++++I+ L T HQA ++ 
Sbjct: 301 RSERVRTYNFPQGRVTDHRINLTLYKLPQVIAGEALNELIDALTTEHQAALLA 353


>gi|168177471|ref|ZP_02612135.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226947362|ref|YP_002802453.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
 gi|254790873|sp|C1FQ97|RF1_CLOBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182670538|gb|EDT82512.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226843349|gb|ACO86015.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 358

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 173/356 (48%), Positives = 245/356 (68%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+  ++S+   +     + KL +E+A +  I++    Y + +++ + 
Sbjct: 1   MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E+R++AQ E+  +   + +LE E+  LLLPKD +DDK   +EIRAG G
Sbjct: 61  DKEMLKEE-SDKELREMAQEEIKELTLRLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA  + WKVE +S +  D GG+KE+   I G+G +SR+K+ESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D++I   D+RID  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AMKVL+ARL++      A   + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGRITDHRI LTLYKLE  L G ID++I  L+T  QA+ +    
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLG 355


>gi|145639103|ref|ZP_01794711.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
 gi|145272075|gb|EDK11984.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
 gi|309751054|gb|ADO81038.1| Peptide chain release factor 1 [Haemophilus influenzae R2866]
          Length = 361

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 256/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W +EVLS ++++ GG+KEI+  +SG GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +AM VL +R+   E++R A E++  R+ 
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRN 297

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  + + 
Sbjct: 298 LLGSGDRSDKIRTYNYPQGRVTDHRINLTIYRLDEVINGKIDELIQPIITEYQADQLAAL 357

Query: 356 SE 357
           SE
Sbjct: 358 SE 359


>gi|331006967|ref|ZP_08330210.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
 gi|330419229|gb|EGG93652.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
          Length = 360

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 180/361 (49%), Positives = 252/361 (69%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L+ R+ E+   +S+  ++   + + +L+ EYA I P+++  + Y +   
Sbjct: 1   MKSSILEKLDLLQERYVEVGALLSDPGTIADQNRFRELSREYAEIEPVVNCYNEYRKILD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++ D  SD ++R + Q E+ + E+E   LE E+  LLLPKD +DDK+  LEIR
Sbjct: 61  NLEEAQVLLKD--SDPDMRAMGQEELKSAEEERAPLELELQKLLLPKDPNDDKNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  R+W+VE++S S ++ GGYKE++A I G+GV+S++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSKYAEKRRWQVEIVSESRSEQGGYKEVIARIVGQGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVA++PEA       I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAIMPEADAQAEVAINKADLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+THIPTG++V    E+SQH+NR RAM +L ARL   +    A E +  RK 
Sbjct: 239 VNKTDSAIRLTHIPTGVVVECQDERSQHKNRARAMSLLAARLQSAQDDVAAKEMADERKN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY+L  V++G +DD++ PL+  HQA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYRLNEVMEGDLDDVVQPLVNEHQADQLAAL 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|167620578|ref|ZP_02389209.1| peptide chain release factor 1 [Burkholderia thailandensis Bt4]
          Length = 360

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 250/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S       +D Y KLT E+A I P++   + + Q + 
Sbjct: 1   MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++     D+ +RD A+ E+    + +  L  E+  +LLPKD +D+++  +EIR
Sbjct: 61  DELAAQELLA----DASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGYGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+THIPTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|153939567|ref|YP_001389502.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|168182252|ref|ZP_02616916.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|170755459|ref|YP_001779766.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|166223550|sp|A7G9P2|RF1_CLOBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576659|sp|B1IE21|RF1_CLOBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152935463|gb|ABS40961.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|169120671|gb|ACA44507.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|182674565|gb|EDT86526.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|295317603|gb|ADF97980.1| peptide chain release factor 1 [Clostridium botulinum F str.
           230613]
 gi|322804409|emb|CBZ01959.1| peptide chain release factor 1 [Clostridium botulinum H04402 065]
          Length = 358

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 173/356 (48%), Positives = 246/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+  ++S+   +     + KL +E+A +  I++    Y + +++ + 
Sbjct: 1   MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E+R++AQ E+  +  ++ +LE E+  LLLPKD +DDK   +EIRAG G
Sbjct: 61  DKEMLKEE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA  + WKVE +S +  D GG+KE+   I G+G +SR+K+ESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D++I   D+RID  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AMKVL+ARL++      A   + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGRITDHRI LTLYKLE  L G ID++I  L+T  QA+ +    
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLG 355


>gi|237793457|ref|YP_002861009.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
 gi|259585216|sp|C3KYH5|RF1_CLOB6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229260673|gb|ACQ51706.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
          Length = 358

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 246/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+  ++S+   +     + KL +E+A +  I++    Y + +++ + 
Sbjct: 1   MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD ++R++AQ E+  +  ++ +LE E+  LLLPKD +DDK   +EIRAG G
Sbjct: 61  DKEMLKEE-SDKDLREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA  + WKVE +S +  D GG+KE+   I G+G +SR+K+ESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D++I   D+RID  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AMKVL+ARL++      A   + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGRITDHRI LTLYKLE  L G ID++I  L+T  QA+ +    
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLG 355


>gi|187777270|ref|ZP_02993743.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
           15579]
 gi|187774198|gb|EDU38000.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
           15579]
          Length = 358

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 246/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+  ++S+   +     + KL +E+A +  I++    Y + +++ + 
Sbjct: 1   MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E+R++AQ E+  +  ++ +LE E+  LLLPKD +DDK   +EIRAG G
Sbjct: 61  DKEMLREE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA  + WKVE +S +  D GG+KE+   + G+G +SR+K+ESG
Sbjct: 120 GDEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAVKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D++I   D+RID  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AMKVL+ARL++      A   + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGRITDHRI LTLYKLE  L G ID++I  L+T  QA+ +    
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLG 355


>gi|186477469|ref|YP_001858939.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
 gi|238691299|sp|B2JHK8|RF1_BURP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|184193928|gb|ACC71893.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
          Length = 360

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 179/362 (49%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S      ++D Y KLT E+A + P++ +  ++ Q   
Sbjct: 1   MKTSMQAKLDQLTTRLAELNDLLSREDITSNIDQYRKLTREHAELQPVVEQYGLWRQTMN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    SD+ ++D A+ E+ A  + +  LE+E+  +LLPKD +DD++  LEIR
Sbjct: 61  DAATAQELL----SDASMKDFAEEEIRASRERMETLESELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA   +W+VE++S+S++D GGYKE++  I+G   +S++K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+LE +++G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRLTDHRINLTLYRLESIMEGDLDELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|332971801|gb|EGK10749.1| peptide chain release factor RF1 [Desmospora sp. 8437]
          Length = 358

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 237/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ R+ E+   +S    +       K ++E + + P       Y +   + ++  
Sbjct: 6   ERLESIRQRYEELNQLLSNPEVIHNADLLRKYSKEQSDLEPKYHAYCEYKEVADQYEEAR 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+ DL + E+  +    + LE EI  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 66  IML-EEESDPEMLDLVKTELEQLSDRKKALEEEIRLLLLPKDPNDDKNVIVEIRGAAGGE 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DL+RMY RY     WK E+L ++    GG+KE+V ++ G+G +SR+K+ESG H
Sbjct: 125 EAALFAADLYRMYTRYGERMGWKSEILDTNTTGLGGFKEVVFSVQGQGAYSRLKYESGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+DV+I  +D+RIDT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPTTESGGRIHTSTATVAVLPEAEEVDVEIQDKDLRIDTFCSSGPGGQSVNTTKSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    EKSQ +N+ +AM+VLRARL D +++    + +  RK+Q+G+GDR
Sbjct: 245 VRITHLPTGIVVSCQDEKSQIKNKEKAMRVLRARLLDQKQQEEEAKMADARKVQVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL+KL+ V+ G +D+I++ L+   QAK++  A 
Sbjct: 305 SERIRTYNFPQSRVTDHRIGLTLHKLDLVMDGDLDEIVDALVLEEQAKLLKKAE 358


>gi|261253598|ref|ZP_05946171.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891]
 gi|260936989|gb|EEX92978.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891]
          Length = 362

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 165/362 (45%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q ++
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAKE--DDEEMREMAQEEIKDAKETIERLNDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY ++A  + W+VEV+SS++++ GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E +  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +++P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLNEVMEGDVSCLVDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|291612728|ref|YP_003522885.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
 gi|291582840|gb|ADE10498.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
          Length = 360

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 245/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +S       +DA+ +L  E A I P++     +   + 
Sbjct: 1   MKSNISSKLAQLSERLDEVTRLLSSEEATRDMDAFRRLNRERAEIEPVVDLYHAWQACEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      + G    D ++R+ A+ E+ A  + + +LE ++   LLPKD +D+++  LE+R
Sbjct: 61  DIATAQEMAG----DPDMREFAEAEIKAGRERLEQLEVDLQKQLLPKDPNDERNVFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY R+A  R+W+VE++S S  + GGYKE++A I G+G +S +K
Sbjct: 117 AGTGGDEAAIFAGDIFRMYVRFAERRRWQVEIISESPGEMGGYKEVIARIIGQGAYSVLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVA+LPEA E+ +V++   ++RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATETQGRIHTSACTVAILPEADEVGEVELNPAELRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG +V     +SQHQN+ +AM+VL AR+ D + +   ++ +A RK 
Sbjct: 237 INKTDSAVRITHLPTGTVVECQDGRSQHQNKAQAMRVLAARIKDKQEQEAHSKIAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYK++ ++ G I ++ N L+  HQA+ + + 
Sbjct: 297 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKMDQIMDGDISELTNALMAEHQAEQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|307731136|ref|YP_003908360.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
 gi|307585671|gb|ADN59069.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
          Length = 360

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   +S        D Y KLT E+A + P++ + +++ Q   
Sbjct: 1   MKTSMQHKLDQLTTRLAELNDLLSREDITSNRDQYRKLTREHAELGPVVEQYALWRQAMH 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+ +R+ A+ E+ A  + + +L  ++  +LLPKD +DD++  LEIR
Sbjct: 61  DAATAQELLA----DASMREFAEEEIRAARERMEQLGGKLQTMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA   +W+VE++S+S++D GGYKE++  I+G   +S++K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+L+ ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRLTDHRINLTLYRLDAIMDGDLDELIGALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|89095600|ref|ZP_01168494.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
 gi|89089346|gb|EAR68453.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
          Length = 357

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 240/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+  +   +S+   V+   KL   ++E + I   +     Y + + + QD  
Sbjct: 3   DRLQAVEDRYERLNELLSDPEIVNDTKKLREYSKEQSGIQETVEAYREYKEVRGQYQDAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+R++ + E+  +E  +  LE  +  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 63  AML-EEKLDAEMREMVKEEIGELEDRVEALEARLKILLIPKDPNDDKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY R+A ++ WK +V+ +S    GGYKEI+  I+G G FS++KFE+G H
Sbjct: 122 EAALFAGDLYRMYSRFAEVQGWKTDVIEASSTGVGGYKEIIFIINGNGAFSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++++I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG +V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 242 VRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQQRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +D++I+ L+   Q+  +  AS+
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIMEEQSAKLKEASD 356


>gi|325660746|ref|ZP_08149374.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472820|gb|EGC76030.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 356

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 177/355 (49%), Positives = 259/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ EI   + E    +    + KL +E A ++PI+   + Y + KQ   D  
Sbjct: 3   DKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIADSE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+R+LA+ E+ + +K + ELE+E+  LLLPKD +DDK+ ++EIRAG GG 
Sbjct: 63  EML-EIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF  +++RMY  YA  ++WK E++S ++N  GG+KE+V  +SG+GV+SRMK+ESGVH
Sbjct: 122 ESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LY++E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL+KL+ +L G +D++I+ L+ A QA  + + +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQAAKLSNMNE 356


>gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
 gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
          Length = 358

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 177/359 (49%), Positives = 257/359 (71%), Gaps = 5/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
                ++ DL  RF E+   + E    +    + KL +E + ++PI+   + Y   KQ  
Sbjct: 1   MDMFDKLDDLLIRFEELMSELQEPDVANDQNRFRKLMKEQSDLAPIVEAYNEYKSAKQAI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   ++ +  SD E+R+LA+ E+ + +K + ELE+E+  LLLPKD +DDK+ ++EIRAG
Sbjct: 61  TDSEEML-EMESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG E+ALF  +++RMY  YA  R WK E++S S+N  GG+KE+V  +SG+GV+SRMK+E
Sbjct: 120 AGGDESALFAAEVYRMYVHYAESRHWKTEMISFSENGIGGFKEVVFMVSGQGVYSRMKYE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID MRASG+GGQ VNT
Sbjct: 180 SGVHRVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH PTGI++ + +EKSQ QN+ +A ++LR++LY++E ++  +  +  R+ QIG
Sbjct: 240 TDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +GDRSE+IRTYNF QGR+T+HRI LTLYK++ ++ G +D+II+ L+ A QA  + + +E
Sbjct: 300 TGDRSEKIRTYNFPQGRVTEHRIKLTLYKIDNIMNGDLDEIIDSLIAADQAAKLANMNE 358


>gi|210623300|ref|ZP_03293717.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
 gi|210153701|gb|EEA84707.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
          Length = 355

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 179/356 (50%), Positives = 249/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             K++  L++ + ++  ++S+   ++    + K  +E+A + PII K   Y        +
Sbjct: 1   MLKKLGVLEDTYKDLTEKISDPEIINDQKVWQKYMKEHADLEPIIMKYREYKAVLDAIAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E+R+LA++E+  +E ++  LE E+  LL+PKD +D+K+ I+EIR G G
Sbjct: 61  SKEILQEE-SDEELRELAKMELSDMESQVEPLEEELKLLLVPKDPNDEKNVIVEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL RMY RYA  + WKV +LSS++   GGYKE+   I G+G +SR+K+ESG
Sbjct: 120 GDEAALFAGDLLRMYSRYAERKGWKVSMLSSNETGVGGYKEVSFMIKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P+TE+ GR+HTS ATVAVLPE  +++V+I   DIRID  RASG+GGQ VNTTD
Sbjct: 180 VHRVQRIPSTESGGRIHTSTATVAVLPEVEDVEVEINDNDIRIDVFRASGNGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG +V    EKSQ +N+ +AMKVL+ARLYD        E SA RK Q+G+G
Sbjct: 240 SAVRITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDRALADQQKEISAERKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGRI+DHRINLTLYKL+  L G ID++I+ L+T  Q + + + +
Sbjct: 300 DRSERIRTYNFPQGRISDHRINLTLYKLDSFLDGDIDEMIDALITVDQTEKMTAIN 355


>gi|313107327|ref|ZP_07793522.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
 gi|310880024|gb|EFQ38618.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
          Length = 360

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 241/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L +R+ E+   + ++  +     +   + EYA + P+I     Y + + 
Sbjct: 1   MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD E+RDLA+ EV      +  L + +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VE LS ++ + GGYKE++A + G  V++++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQATIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITHIP+GI+V    E+SQH+NR +AM  L A+L D ++       ++ RKL
Sbjct: 239 VNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY L  V++G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLLQEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|295677813|ref|YP_003606337.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
 gi|295437656|gb|ADG16826.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
          Length = 360

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 251/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S      ++D Y KLT E+A + P++    ++ Q + 
Sbjct: 1   MKTSMQRKLDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVEHYGLWRQAQN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+ +RD A+ E+ A    +  L  E+  +LLPKD +D+++  LEIR
Sbjct: 61  DAATAQELLA----DASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDERNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA   +W+VE++S+S++D GGY+E++  I+G   +S++K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQTHEQQTKEAATRKN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+L+ ++ G ++++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRLTDHRINLTLYRLDAIMDGDLEELIAALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|253580116|ref|ZP_04857383.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848635|gb|EES76598.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39BFAA]
          Length = 358

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 248/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF E+   + E    D    + KL +E + + PI+     Y + K+  QD  
Sbjct: 3   DKLDDLLIRFEEVLNELGEPGVTDNQEHFQKLMKEQSDLQPIVDAYREYKKNKETIQDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ +   D ++R++ + E+   +K + ELE+E+  LLLPKD +D+K+ I+EIRAG GG 
Sbjct: 63  SML-EEEKDEDMREMLKEELSEAKKNVEELEHELKILLLPKDPNDNKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY +YA  R+WK E++S ++N  GG+KE+   I+G G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMITGAGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA EID  + + D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTCTVAIMPEAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A+KVLR+RLY++E  +  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL++LE VL G +D+II+ L+ A QA  + +  +
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHRLENVLNGDLDEIIDSLIAADQAAKLSNLQD 356


>gi|116052810|ref|YP_793127.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893762|ref|YP_002442631.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
 gi|254244443|ref|ZP_04937765.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
 gi|296391486|ref|ZP_06880961.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAb1]
 gi|122257179|sp|Q02G09|RF1_PSEAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739119|sp|B7V0L1|RF1_PSEA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115588031|gb|ABJ14046.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197821|gb|EAZ61884.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
 gi|218773990|emb|CAW29805.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
          Length = 360

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 241/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L +R+ E+   + ++  +     +   + EYA + P+I     Y + + 
Sbjct: 1   MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD E+RDLA+ EV      +  L + +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VE LS ++ + GGYKE++A + G  V++++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITHIP+GI+V    E+SQH+NR +AM  L A+L D ++       ++ RKL
Sbjct: 239 VNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY L  V++G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLLQEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|170696251|ref|ZP_02887383.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
 gi|170138811|gb|EDT07007.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
          Length = 360

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 255/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R AE+   +S      ++D Y KLT E+A + P++ + +++ Q   
Sbjct: 1   MKTSMQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEQYALWRQAMH 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    +D  +R+ A+ E+ A  + + +L  E+  +LLPKD +DD++  LEIR
Sbjct: 61  DAATAQELL----TDISMREFAEEEIRAARERMEQLGGELQKMLLPKDPNDDRNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA   +W+VE++S+S++D GGYKE++  I+G   +S++K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLY+L+ ++ G +D++I+ L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRLTDHRINLTLYRLDAIMDGDLDELISALVSEHQAELLASL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|115522190|ref|YP_779101.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisA53]
 gi|122298096|sp|Q07VB3|RF1_RHOP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115516137|gb|ABJ04121.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisA53]
          Length = 359

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 188/359 (52%), Positives = 262/359 (72%), Gaps = 2/359 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L  R A +E ++    + + Y+K+T E A ++P++  +  Y Q + E  
Sbjct: 1   MSRLPETKLDILLARHAALEAQLLGPVNSEHYVKITRELAELNPLVDAVKAYRQVRDEIG 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+ ++I D +SD E+R +AQ E  A+E+   EL  +I   LLPKD  DD++ +LE+RAGT
Sbjct: 61  DIDSLIADPDSDPELRAMAQAEHAALEEHEAELAQQIRIALLPKDAMDDRNVMLEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYE++AAL+ W VEV+S+S+   GG+KEI+A + GRG F+++KFES
Sbjct: 121 GGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGAAGGFKEIIAEVKGRGAFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAV+PE  E+DV+I  +D++IDTMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVMPEVEEVDVEIKQDDLKIDTMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITH+PTGI+V     +SQH+NR  AM +LR+R+YD E++R+   RSA RK ++GS
Sbjct: 241 ESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLDAARSAERKEKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++++ L T +QA  + +  +
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELVDALTTDYQAAQLAAQGD 359


>gi|34495535|ref|NP_899750.1| peptide chain release factor 1 [Chromobacterium violaceum ATCC
           12472]
 gi|46576724|sp|Q7P1Y2|RF1_CHRVO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34101390|gb|AAQ57759.1| peptide chain release factor I [Chromobacterium violaceum ATCC
           12472]
          Length = 358

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 244/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++       ++A+ KLT E+A ++P++   S Y Q + 
Sbjct: 1   MKASIAARLAQLADRLEEVTHLLASETATQDMEAFKKLTREHAELTPVVETFSAYRQCEG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+++ AQ E+   + ++  L+ E+  LLLPKD +DDK+  LEIR
Sbjct: 61  DIAAAEDMLA----DPEMKEFAQAEIAEGKDKLEALDLELQKLLLPKDPNDDKNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  DL RMY RYA   +W+VE++S+S++D GGYKE++  + G+G +SR+K
Sbjct: 117 AGTGGDEAALFAADLLRMYTRYAERNRWQVEIVSASESDLGGYKEVIVRLVGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+       +V +   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMAEADEIAEVVLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTGI+      +SQH N+  AM+VL AR+YD++ +    + +A RK 
Sbjct: 237 INKTDSAVRITHIPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLREKNQKEAAERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGRITDHRINLTLYKL+YV+ G + ++ + L+   QA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRITDHRINLTLYKLDYVMDGDLAELTDALIAEQQAELLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|23012458|ref|ZP_00052537.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 361

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 183/359 (50%), Positives = 252/359 (70%), Gaps = 3/359 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M  +   ++  +  R   +  ++++  +  ++ ++L+ E + +  +++ I  Y   +   
Sbjct: 1   MTPIPSDRLDAILARHEIVTAQLADGSAEAESIVQLSRELSELDGVVAAIHAYRAAEANL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             +  +I +   D E+R LA  E    E+ + +    +  +LLPKD  D+KS ILEIRAG
Sbjct: 61  AGIRALIDEPGGDPEMRALAAEEKPDAEEALEQAHRALQLMLLPKDAADEKSAILEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY +YA  + W+VEV+S S+   GGY+E+VA + GR VFSR+KFE
Sbjct: 121 TGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVKGRSVFSRLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE  GR+HTSAATVAVLPEA E+DV I   D++IDTMRA G+GGQHVN 
Sbjct: 181 SGAHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDVVINEADLKIDTMRAQGAGGQHVNK 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA+RITH+PTG++V    E+SQH+NR RAM +LRARL+D ER    + R+A+RK Q+G
Sbjct: 241 TESAIRITHLPTGVVVFVQEERSQHKNRARAMALLRARLFDAERSAKDSARAADRKAQVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHRINLTLYKLE V+ G  +D++I+ L+T HQA+++ +  
Sbjct: 301 SGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVTEHQAELLAAEG 359


>gi|315127042|ref|YP_004069045.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
 gi|315015556|gb|ADT68894.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
          Length = 361

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    ++++  L  R+ E++  +S+   +     +  L++EY+ +  ++     Y Q ++
Sbjct: 1   MKESVYRKLETLVERYEEVQALLSDPSVISDQNRFRTLSKEYSELEEVVKTFLAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ D  SD E+R++AQ E    + +I  LE++I  L+LPKD  D+ +  LE+R
Sbjct: 61  DLSSAEEMLKD--SDPEMREMAQEEYKEAKAQISTLEDDIQVLMLPKDPKDNNNVFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  +KWKVEV+++++ + GGYKE++A ISG GV+ ++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAETKKWKVEVVTTNEGEHGGYKEVIANISGEGVYGQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GRVHTSA TVAV+        ++I   DI++DT RASG+GGQH
Sbjct: 179 FESGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIEINTADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM VL ARL   E ++     ++ R+ 
Sbjct: 239 VNKTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGRITDHRINLTLY+L  V+ G +  ++ PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRITDHRINLTLYRLNEVVAGDLGAVVEPLMQEHQADLLAAM 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|194016506|ref|ZP_03055120.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061]
 gi|194011979|gb|EDW21547.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061]
          Length = 355

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 162/355 (45%), Positives = 241/355 (67%), Gaps = 5/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ ++   +S+   V+   KL   ++E + I   +     Y     +  +
Sbjct: 1   MLDRLKSIEERYEKLNEYLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRAAYDQLSE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D+E+RD+ + E+  + +E   LE+E+  LL+PKD +D+K+ I+E+R   G
Sbjct: 61  AKAML-EEKLDAEMRDMVKEEISELTEETERLEDELKILLIPKDPNDNKNVIVEVRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+L+RMY RYA ++ WK EV+ ++    GGYKEI+  ISG+G +SR+KFE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAEMQGWKTEVMEANVTGTGGYKEIIFMISGKGAYSRLKFENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQREAQAEYDQTRKSAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D++I+ L+   QA+ + +A
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQARKLQNA 354


>gi|170761198|ref|YP_001785468.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|238688740|sp|B1KSR1|RF1_CLOBM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169408187|gb|ACA56598.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 358

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 246/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+  ++S+   +     + KL +E+A +  I++    Y + +++ + 
Sbjct: 1   MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E+R++AQ E+  +  ++ +LE E+  LLLPKD +DDK   +EIRAG G
Sbjct: 61  DKEMLKEE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA  + WKVE +S +  D GG+KE+   + G+G +SR+K+ESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D++I   D+RID  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AMKVL+ARL++      A   + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGRITDHRI LTLYKLE  L G ID+ I  L+T  QA+ + +  
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQAEKMKNLG 355


>gi|219670829|ref|YP_002461264.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
 gi|254790878|sp|B8FZ76|RF1_DESHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219541089|gb|ACL22828.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
          Length = 355

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 165/356 (46%), Positives = 246/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ +++ R+ E+   +S+   +     + K  +  A ++ I+     Y +  +  ++
Sbjct: 1   MQRKLIEIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D E +++A++E+  + ++  ELE ++  LLLPKD +DDK+ I+EIRAG G
Sbjct: 61  TQGLL-EEKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY +YA  + W+ E+LS+S  D GG+KEI+  I G+G +S++KFESG
Sbjct: 120 GEEAALFAGDLYRMYTKYAEHQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS  TVAVLPEA E+DV I   D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPTTESGGRIHTSTTTVAVLPEAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQ 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG +V    EKSQ +N+ +A++VLRARL +  ++    E ++ R+ Q+G+G
Sbjct: 240 SAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARLLERAQEEAMGELASERRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTL++L+ +L G +D++IN L+T  QA+ + S +
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQAERLKSEA 355


>gi|330815385|ref|YP_004359090.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
 gi|327367778|gb|AEA59134.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
          Length = 360

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 182/362 (50%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L NR AE+   +S       +D Y KLT E+A I P++   + +   + 
Sbjct: 1   MKTSMQSKLDQLSNRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRLARG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +E     ++    SD+ +R+ A+ E+    + +  LE E+  +LLP+D +D+++  LEIR
Sbjct: 61  DEATAQELL----SDAAMREFAEEEIREARERMARLEAELQKMLLPRDPNDERNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  ++W+VE++S S +D GGYKE++  I+G+G +SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGIVVECQDDRSQHKNKERALKVLAARIKDKQYHEQHAKEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I  L++ HQA+++ S 
Sbjct: 297 LIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEALMDGDLDEMIATLVSEHQAELLASL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans]
          Length = 356

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R AE+ + + +     ++D Y K+T E+A + P+++    Y Q   + +D   
Sbjct: 4   KLDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKDAQG 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    SD ++++ AQ E+ A +  + +LE ++  +LLPKD +D+++  LEIRAGTGG E
Sbjct: 64  ML----SDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +ALF GDL RMY R+A   +W++E++S S ++ GGYKE++  I G G +S++KFESG HR
Sbjct: 120 SALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE  GR+HTSA TVAV+PEA E  DV+I   D+RIDT RASG+GGQH+N TDSA
Sbjct: 180 VQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSA 239

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V    ++SQH+N+  A+KVL AR+ DV+ +   ++ +A RK  IGSGDR
Sbjct: 240 VRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSQEAATRKSLIGSGDR 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRINLTLYKL++++ G + ++ N L   HQA ++ +  +
Sbjct: 300 SERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQADLLAALGD 354


>gi|118581059|ref|YP_902309.1| peptide chain release factor 1 [Pelobacter propionicus DSM 2379]
 gi|166223584|sp|A1ASD1|RF1_PELPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118503769|gb|ABL00252.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
           propionicus DSM 2379]
          Length = 354

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 256/355 (72%), Gaps = 8/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +I +L+ R+ E+E  +S+   +     + KL+ E+A ++ +++    Y +  +E +   
Sbjct: 3   DKIEELERRYQELEALLSDPAVISNQPEFRKLSREHADLTGLVAAYRRYRRVLEEMEGNR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D +++++A+ E+  +E+E   LE EI  LLLP+D +DDKS ILEIRAGTGG 
Sbjct: 63  ELLA----DVDMKEMAEEELKVLEEEKERLEGEIQMLLLPRDPNDDKSVILEIRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF GDLFRMY R+A + +WKVE +S+S+++ GG+KEI+A++ G GVF+++K+ESG H
Sbjct: 119 ESALFAGDLFRMYSRFADVNRWKVETISASESERGGFKEIIASVEGEGVFAKLKYESGTH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSA TVA++ EA ++D+DI   D++ID  R+SG+GGQHVNTTDSA
Sbjct: 179 RVQRVPETEAQGRIHTSACTVAIMAEAEDVDIDINPTDLKIDVYRSSGAGGQHVNTTDSA 238

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG +V    E+SQ +NR +AMKVL+ R+ D  ++      +A+RK Q+GSGDR
Sbjct: 239 VRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRIMDSIQQEQNARMAADRKQQVGSGDR 298

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLY+L+ ++ G I +I++ L   +Q + + + SE
Sbjct: 299 SERIRTYNFPQGRMTDHRIGLTLYRLDAIMAGDIAEIVDALRAHYQMEALKAQSE 353


>gi|15599860|ref|NP_253354.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
 gi|107099668|ref|ZP_01363586.1| hypothetical protein PaerPA_01000686 [Pseudomonas aeruginosa PACS2]
 gi|12231016|sp|P42806|RF1_PSEAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9950920|gb|AAG08052.1|AE004880_8 peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
          Length = 360

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 241/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L +R+ E+   + ++  +     +   + EYA + P+I     Y + + 
Sbjct: 1   MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD E+RDLA+ EV      +  L + +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W++E LS ++ + GGYKE++A + G  V++++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERQGWRIETLSENEGEHGGYKEVIARVEGDNVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITHIP+GI+V    E+SQH+NR +AM  L A+L D ++       ++ RKL
Sbjct: 239 VNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY L  V++G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLLQEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|296159488|ref|ZP_06842312.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
 gi|295890196|gb|EFG69990.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
          Length = 356

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 176/358 (49%), Positives = 252/358 (70%), Gaps = 9/358 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L  R AE+   +S      ++D Y KLT E+A + P++   +++ Q   +   
Sbjct: 1   MQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMNDAAT 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D+ +RD A+ E+ A  + + +L  E+  +LLPKD +DD++  LEIRAGTG
Sbjct: 61  AQELLA----DASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E+ALF GDL RMY RYA   +W+VE++S+S++D GGYKE++  I+G   +S++KFESG
Sbjct: 117 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH+N T
Sbjct: 177 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 236

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK  IGS
Sbjct: 237 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF QGR+TDHRINLTLY+L+ ++ G +D++I  L++ HQA+++ S  +
Sbjct: 297 GDRSERIRTYNFPQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQAELLASLGD 354


>gi|229826190|ref|ZP_04452259.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC
           49176]
 gi|229789060|gb|EEP25174.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC
           49176]
          Length = 357

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 246/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + I  L  R+ E+   ++        + +  L +E + + PI+ K   Y    ++ +D  
Sbjct: 3   ESIETLAGRYKEVTDELASGMAAADPNKFRNLMKEQSDLQPIVEKYKAYKANNEQIEDCL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I +  SD E+++LA+ E+   +  + E E E+  LLLPKD +DDK+ I+EIRAGTGG 
Sbjct: 63  RMISEE-SDPELKELAREELAEAKAAVPEFEKELKVLLLPKDKNDDKNVIVEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F  +L+RMY +YA   +WK E+LS ++N  GG+KE+   I+G+G FS++K+ESG H
Sbjct: 122 EAAIFASELYRMYCKYAENNRWKPEILSFNENGLGGFKEVTFLINGKGAFSKLKYESGTH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++G++ TSAATVA+LPEA E+DV+I   DI+ D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPVTESNGKLQTSAATVAILPEAEEVDVNIDPNDIKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +AMKVLR+RLY++E ++   E +ANRK Q+GSGDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKAMKVLRSRLYELECEKAHAEEAANRKSQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI  T + ++ V+ G + +II  L+ A Q + + +  E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKFTTHNIDGVMGGDLTEIIENLIVADQTEKLAAMGE 356


>gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
 gi|259585239|sp|C4Z1S4|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
          Length = 357

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 246/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D  NR+ +I   +     V+    + KL +E ++++P+I   + Y   K+  +D  
Sbjct: 3   DRLEDTVNRYEDITAELGNPDVVNDQEKFKKLMKEQSSLAPLIETYTEYKNCKKNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  +D E++++A+ E+   +  + ELE+E+  LLLPKD +DDK  ++EIRAG GG 
Sbjct: 63  AIL-DEETDEELKEMAKEELNESKARVEELEHELKILLLPKDPNDDKDIVVEIRAGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +LFRMY  YA  R WKVEVLS  +   GG KE+   + G+G +S MK+ESGVH
Sbjct: 122 EAALFAAELFRMYVHYAQARGWKVEVLSGDETGIGGMKEVEFMVKGQGAYSIMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE++GR+ TS A+VAV+PEA E+D+ I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPVTESNGRIQTSTASVAVMPEAEEVDIHIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LRA+LYD+E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDIETQKAHDAEADARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +E+IRTYNF QGR+TDHRI LTLYKL+ ++ G I DII+  + A QA  +    E
Sbjct: 302 AEKIRTYNFPQGRVTDHRIGLTLYKLDKIMDGDIQDIIDACIAADQAAKLAKMGE 356


>gi|157273346|gb|ABV27245.1| peptide chain release factor 1 [Candidatus Chloracidobacterium
           thermophilum]
          Length = 357

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L+ ++  +  ++S+   V     Y KL ++++ ++ ++ K   Y   +       
Sbjct: 3   DKLKALEEKYEALTAQLSDPEVVADAARYAKLAKQHSELTEVVEKFREYQTIEANLASAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+  LA+ E+  +EK+  + + E+  LL PKD +D K+ +LEIRAGTGG+
Sbjct: 63  ELLNEAE-DAEMVALAREEIALLEKQRAQCQLELEQLLTPKDPNDRKNVLLEIRAGTGGN 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF G+L RMY RYA  R W+V++L  S ++ GG KE +  I G GV+SR+K ESGVH
Sbjct: 122 EASLFAGELLRMYLRYAERRGWRVQILDESLSEVGGLKEGIVLIEGTGVYSRLKHESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GR+HTS  TVAVLPEA E+D++I  +D+RIDT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPVTESAGRIHTSTVTVAVLPEAEEVDIEIDPKDVRIDTFCSSGPGGQSVNTTYSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V+   EKSQ +NR +A ++LRARL ++ER++     +  R+ Q+G+G+R
Sbjct: 242 VRLTHLPTGLVVSIQDEKSQIKNREKAFRILRARLLELERQKQHEAIAGERRAQVGTGER 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF + R+TDHRI LTL++L+ ++ G +D +I+PL+T  QA  + S +
Sbjct: 302 SEKIRTYNFKENRVTDHRIGLTLHQLDTIMDGELDGLIDPLITHFQALKMQSEA 355


>gi|296331340|ref|ZP_06873812.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676326|ref|YP_003867998.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296151455|gb|EFG92332.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414570|gb|ADM39689.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 356

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 163/356 (45%), Positives = 235/356 (66%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ ++   +S+   V+   KL   ++E + I   +     Y    ++  D
Sbjct: 1   MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D+E+RD+ + E+  ++KE   L   +  LL+PKD +DDK+ I+EIR   G
Sbjct: 61  AKAML-EEKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+L+RMY RYA L+ WK EV+ +S    GGYKEI+  I+G G +S++K+E+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVA LPEA E++VDI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +GSG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D+++  L+   QA  +  A 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASKLQQAE 355


>gi|85860527|ref|YP_462729.1| peptide chain release factor 1 [Syntrophus aciditrophicus SB]
 gi|119361624|sp|Q2LWU9|RF1_SYNAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85723618|gb|ABC78561.1| bacterial peptide chain release factor 1 (rf-1) [Syntrophus
           aciditrophicus SB]
          Length = 357

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 175/354 (49%), Positives = 250/354 (70%), Gaps = 7/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ ++++R+ E+E  +S+   V     Y K  +E+A +  ++     Y++     ++   
Sbjct: 4   KLKEVESRYLELEKLLSDPTVVTRQSLYQKYAKEHADLRDLVEVFRKYEKVGAAIEEAQQ 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++A+ E+  + + +  LE  +  LLLP+D +DD++  LEIRAGTGG E
Sbjct: 64  LLR--GDDEELKEIAREELPELRQHLAGLEERLKVLLLPRDLNDDRNVFLEIRAGTGGDE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDN-DDGGYKEIVATISGRGVFSRMKFESGVH 183
           A LFVGDLFRMY RYA +R+WKVEV+SS+ +   GG+KEI+A+I+G+G +S++K+ESGVH
Sbjct: 122 AGLFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIASIAGQGAYSQLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSA TVA++PEA E++V I   D+RID   +SG GGQ VNTTDSA
Sbjct: 182 RVQRVPVTEAQGRIHTSAVTVAIMPEADEVEVTIDPNDLRIDVFHSSGHGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG++V    EKSQ +N+ +A+KVLRARL D+  K+ ++E S  RK Q+GSGDR
Sbjct: 242 VRITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKKQSDEISEARKSQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHR+ LTLY LE +L G I + I+ L    QA+ +   S
Sbjct: 302 SERIRTYNFPQGRVTDHRVGLTLYSLENILGGDIQEFIDALTAYFQAESLKQQS 355


>gi|89897680|ref|YP_521167.1| peptide chain release factor 1 [Desulfitobacterium hafniense Y51]
 gi|89337128|dbj|BAE86723.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 360

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 166/357 (46%), Positives = 247/357 (69%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           L  +++ +++ R+ E+   +S+   +     + K  +  A ++ I+     Y +  +  +
Sbjct: 5   LMQRKLIEIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLE 64

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++ +   D E +++A++E+  + ++  ELE ++  LLLPKD +DDK+ I+EIRAG 
Sbjct: 65  ETQGLL-EEKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGA 123

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDL+RMY +YA  + W+ E+LS+S  D GG+KEI+  I G+G +S++KFES
Sbjct: 124 GGEEAALFAGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFES 183

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTS  TVAVLPEA E+DV I   D+RID   +SG GGQ VNTT
Sbjct: 184 GVHRVQRVPTTESGGRIHTSTTTVAVLPEAEEVDVAINPNDLRIDIFCSSGPGGQSVNTT 243

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
            SAVRITH+PTG +V    EKSQ +N+ +A++VLRARL +  ++    E ++ R+ Q+G+
Sbjct: 244 QSAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARLLERAQEEAMGELASERRSQVGT 303

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRI LTL++L+ +L G +D++IN L+T  QA+ + S +
Sbjct: 304 GDRSERIRTYNFPQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQAERLKSEA 360


>gi|157694096|ref|YP_001488558.1| peptide chain release factor 1 [Bacillus pumilus SAFR-032]
 gi|166977360|sp|A8FID1|RF1_BACP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157682854|gb|ABV63998.1| peptide chain release factor RF1 [Bacillus pumilus SAFR-032]
          Length = 355

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 241/355 (67%), Gaps = 5/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ ++   +S+   V+   KL   ++E + I   +     Y     +  +
Sbjct: 1   MLDRLKSIEERYEKLNEYLSDPEVVNDPTKLREYSKEQSDIQETVEVYRQYRAAYDQLSE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+E+RD+ + E+  + +E   LE+E+  LL+PKD +D+K+ I+E+R   G
Sbjct: 61  AKAMLEDK-LDAEMRDMVKEEISELTEETERLEDELKILLIPKDPNDNKNVIVEVRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+L+RMY RYA ++ WK EV+ +S    GGYKEI+  ISG+G +S++KFE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAEMQGWKTEVMEASVTGTGGYKEIIFMISGKGAYSKLKFENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQREAQAEYDQTRKSAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D++I+ L+   QA+ + +A
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQARKLQNA 354


>gi|307131078|ref|YP_003883094.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
 gi|306528607|gb|ADM98537.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
          Length = 361

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 176/355 (49%), Positives = 247/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + E   +   D +  L+ EYA ++ I      + Q + +      
Sbjct: 8   KLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQRWQQTQDDLATAEL 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+RDLAQ E+   +    ELE ++  LLLPKD DD++ C LEIRAGTGG E
Sbjct: 68  ML----DDPEMRDLAQDELKTAKAASEELEQQLQVLLLPKDPDDERGCFLEIRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+WKVE++S+SD + GGYKE++A ++G G + ++KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVAGDGAYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E ++   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + +E
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEAMEGKLDMLIQPIVQEYQADQLAALAE 358


>gi|271500557|ref|YP_003333582.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
 gi|270344112|gb|ACZ76877.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
          Length = 361

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 248/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E++  + E   +   D +  L+ EYA ++ I      + Q + 
Sbjct: 1   MKSSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFERWQQTQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+RDLAQ E+ A +    +LE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIETAELML----DDPEMRDLAQDELQAAKVASEDLEQQLQVLLLPKDPDDERGCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA  R+WKVE++S+SD + GGYKE++A + G G + ++K
Sbjct: 117 AGTGGDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEVIAKVVGDGAYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPSDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +   E ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMHKRQQEEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRIRTYNFPQGRVTDHRINLTLYRLDEAMEGKLDMLIQPIVQEYQADQLAAL 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|228470795|ref|ZP_04055643.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3]
 gi|228307468|gb|EEK16473.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3]
          Length = 368

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 151/361 (41%), Positives = 226/361 (62%), Gaps = 12/361 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           +I  L  R  E+E  +++   +     +  L++EY  +  I+   + Y Q   ++++  +
Sbjct: 7   RIEALVARHEELETLITDPSVIADGRRFATLSKEYTHLGEILKAGAQYKQLLTQQEEAES 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            + D +SD E++ +A+  +   ++E  ++E EI  LLLP D +DDK+ ILE+RAGTGG E
Sbjct: 67  TLQDSDSDEELKAMARELLAEAKEESPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RY   + W V V S ++   GGYKEIV  ++G GV+  +K+ESGVHR
Sbjct: 127 AALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GR+HTSAATVAVLPEA + +V+I   +I+ DT R+SG+GGQ+VN  +S V
Sbjct: 187 VQRVPQTETQGRIHTSAATVAVLPEADKFEVNINEGEIKWDTFRSSGAGGQNVNKVESGV 246

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ +              +  +  + Q +N+ RA+  LR  +YD E ++  +E ++ RK 
Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDEIASRRKT 306

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS +IRTYNF QGR+TDHRI LT++ L  VL G +  II+ L+ A   + +  A
Sbjct: 307 MVSTGDRSAKIRTYNFPQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAENTERLKEA 366

Query: 356 S 356
           +
Sbjct: 367 A 367


>gi|253681032|ref|ZP_04861835.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
 gi|253562881|gb|EES92327.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
          Length = 357

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 174/356 (48%), Positives = 249/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++   +N++ E+ +++S+   +   + + KL +E+A +  I++K   Y   K+E + 
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ + N D +++++ Q E+  +E+ I   E E+  LLLPKD +DDK+  +EIRAG G
Sbjct: 61  NKELLSEEN-DRDMKEMIQEEIKTLEENIVRDEEELKILLLPKDPNDDKNVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA    WK E++S+++ D GG+KE+V  + G   +S+MKFESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSTNETDIGGFKEVVFMLRGDSAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D+ I   DIR+D  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    EKSQ +N+ +A+KVL+ARLY+      A   SA+RK Q+G+G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAERAASISADRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+T+HRI +TLYKLE  L G +++II+ L+TA QA+ + +  
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGVTLYKLEAFLDGDMEEIIDALITAEQAEKMKAMG 355


>gi|331090678|ref|ZP_08339527.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400092|gb|EGG79743.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 356

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 258/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF EI   + E    +    + KL +E A ++PI+   + Y   KQ   D  
Sbjct: 3   DRLEDLIIRFEEIMGELQEPDVANDQNRFRKLMKEQADLTPIVDAYNEYKSAKQAIADSE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+R+LA+ E+ A +K + ELE+E+  LLLPKD +DDK+ ++EIRAG GG 
Sbjct: 63  EML-EMESDEEMRELAKEELSASKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF  +++RMY  YA  ++WK E++S ++N  GG+KE+V  +SG+ V+SRMK+ESGVH
Sbjct: 122 ESALFAAEVYRMYVHYAESKRWKTELISFNENGIGGFKEVVFMVSGQSVYSRMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDDKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LY++E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+T+HRI LTLYK++ ++ G +D+II+PL+ A QA  + + +E
Sbjct: 302 SEKIRTYNFPQGRVTEHRIKLTLYKIDNIMNGDLDEIIDPLIAADQAAKLANMNE 356


>gi|119361535|sp|Q24ML9|RF1_DESHY RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 355

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 165/356 (46%), Positives = 246/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ +++ R+ E+   +S+   +     + K  +  A ++ I+     Y +  +  ++
Sbjct: 1   MQRKLIEIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D E +++A++E+  + ++  ELE ++  LLLPKD +DDK+ I+EIRAG G
Sbjct: 61  TQGLL-EEKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY +YA  + W+ E+LS+S  D GG+KEI+  I G+G +S++KFESG
Sbjct: 120 GEEAALFAGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS  TVAVLPEA E+DV I   D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPTTESGGRIHTSTTTVAVLPEAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQ 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG +V    EKSQ +N+ +A++VLRARL +  ++    E ++ R+ Q+G+G
Sbjct: 240 SAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARLLERAQEEAMGELASERRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTL++L+ +L G +D++IN L+T  QA+ + S +
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQAERLKSEA 355


>gi|92113653|ref|YP_573581.1| peptide chain release factor 1 [Chromohalobacter salexigens DSM
           3043]
 gi|119361523|sp|Q1QXC6|RF1_CHRSD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91796743|gb|ABE58882.1| bacterial peptide chain release factor 1 (bRF-1) [Chromohalobacter
           salexigens DSM 3043]
          Length = 361

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 165/360 (45%), Positives = 239/360 (66%), Gaps = 7/360 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++   + RF E+   ++E   +     +   + EYA + P+I     Y + + 
Sbjct: 1   MKATLRTRLDGFQERFEELAALLAEPDVIADQARFRDYSREYAELEPLIEAWRSYRRTED 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  D  SD E+R+LA+ E    +  +  L+ ++  LL+P+D DD  +  LEIR
Sbjct: 61  DLEAAEQMRED--SDPEMRELAEEEWREAQARLEALDADVKRLLVPRDPDDASNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA    W++EV+++S  + GGYKE++A + G  V++R+K
Sbjct: 119 AGTGGDEAALFAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARVRGDNVYARLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+   +A  +V++   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMAEASAVGEVELNSNDLRVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+P+G++V    E+SQH+NR +AM +L ARL          +++  R+ 
Sbjct: 239 VNTTDSAIRITHLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQRQQQADTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGRITDHRINLTLYKL  V+ G + ++I+PL+  +QA+ + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRITDHRINLTLYKLGDVMAGELGEVIDPLIHEYQAEQLSAL 358


>gi|77460969|ref|YP_350476.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf0-1]
 gi|119361582|sp|Q3K6W9|RF1_PSEPF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77384972|gb|ABA76485.1| peptide chain release factor RF-1 [Pseudomonas fluorescens Pf0-1]
          Length = 360

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + +   +     +   ++EYA + P++         + 
Sbjct: 1   MKASLLNKLDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAELEPVVQGYKKLLGVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++ +  LE+++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A I G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAVLPE  E + ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTG +V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL
Sbjct: 239 VNTTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF+QGR+TDHR+NLTLY L+ +L G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVEAVIEPLLAEYQADQLAAI 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|255262532|ref|ZP_05341874.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
 gi|255104867|gb|EET47541.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
          Length = 351

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 186/354 (52%), Positives = 245/354 (69%), Gaps = 4/354 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +   ++  +  RF  +E +M+   + D    L +EY+ + P+I  I+ Y   + +  + 
Sbjct: 1   MIPQDKLEQILGRFQFLEAKMASGDAADDIAALAKEYSDLRPVIDVITEYQTLEADLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    SD ++++LA+ E+  +   + E+E  +   LLPKD  D +  ++EIR GTGG
Sbjct: 61  ELMM----SDPDMKELAEEELPMLRARLPEIEQNLQIALLPKDAADARPAMIEIRPGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL RMY+RYA  R W  E++     + GG KE+ A + G GVF+RMK+ESGV
Sbjct: 117 DEAALFAGDLLRMYQRYAEARGWTFEIIEEQSTELGGIKEVTAHVKGEGVFARMKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA ++D+ I   D+RIDTMRASGSGGQHVNTTDS
Sbjct: 177 HRVQRVPTTESGGRIHTSAATVAVLPEAEDVDIQIDPGDLRIDTMRASGSGGQHVNTTDS 236

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AVRITHIP+GI+V SSEKSQH+NR  AM  L+ RLYD ER+R+  ERSA+R  QIGSGDR
Sbjct: 237 AVRITHIPSGIVVVSSEKSQHRNREIAMLTLKTRLYDAERQRVDGERSADRAAQIGSGDR 296

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLYKL+ V+QG +D+ I  L    QA ++    
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYKLDQVMQGDLDETIEALTADAQATLMAEMG 350


>gi|77164037|ref|YP_342562.1| peptide chain release factor 1 [Nitrosococcus oceani ATCC 19707]
 gi|254436043|ref|ZP_05049550.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
 gi|119361569|sp|Q3JDR4|RF1_NITOC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76882351|gb|ABA57032.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosococcus
           oceani ATCC 19707]
 gi|207089154|gb|EDZ66426.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
          Length = 360

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 181/362 (50%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   ++E         + +L++EYA + P+I     ++Q + 
Sbjct: 1   MKDSIRSKLETLAERQQELTALLAEPEIASAQKKFRELSQEYAQLEPVIGCFRDFEQAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   ++ D   D E+R LAQ E+ A EK++  L+ E++ LLLP D +D ++  LEIR
Sbjct: 61  VLNESKALLQDQ--DPELRVLAQEEIAAAEKKLERLDRELHTLLLPSDPNDKRNIFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  DL RMY RYA  R W+ E++  S  + GG+KEI+  I G G +SR+K
Sbjct: 119 AGTGGDEAALFASDLLRMYLRYAEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PEA EID  DI   D+R+DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPQTESQGRIHTSACTVAIMPEAEEIDDIDINPADLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+ +GI+V    E+SQH+NR RAM +LR +L   E  ++  E +A R+ 
Sbjct: 239 VNKTDSAIRITHLASGIVVECQDERSQHKNRARAMSLLRTKLKSEEEAKLVAEETATRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +LQG +D II+PL+  HQA  + + 
Sbjct: 299 LIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEILQGNLDAIIDPLVAEHQADQLAAL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4]
 gi|61214640|sp|Q727E1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223554|sp|A1VAK8|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           vulgaris DP4]
 gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
          Length = 357

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 187/354 (52%), Positives = 258/354 (72%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +L+ +F ++E ++S +   +    Y KLT+ +A +  ++     Y + KQ   D   
Sbjct: 4   KLENLELKFEDLEQQLSSAEVFNDQDRYRKLTKAHADLKQVVDAFRRYKEMKQNLADNKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++GD  SD EIR +A  E+ AIE  + ++E E+  LLLP+D  DDK+ +LEIRAGTGG E
Sbjct: 64  LLGD--SDHEIRAMAHEEIKAIEAALPDIEQELKILLLPRDPMDDKNILLEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF  DLFRMY RYA +  WKVEVLS+SD+D GGYKEI+A I+G  V+SR+K+ESG HR
Sbjct: 122 ASLFAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALIAGDKVYSRLKYESGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATEA GR+HTSAATVAV+PEA E+DVDI  +D+RID  RASG+GGQHVN T+SAV
Sbjct: 182 VQRVPATEAQGRIHTSAATVAVMPEAEEVDVDIRPDDLRIDVYRASGAGGQHVNKTESAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V    EKSQH+N+ +AMKVL +R+   E++R  +  +  R+  +GSGDRS
Sbjct: 242 RITHLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQERAHSVIADARRALVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q RITDHRINLTLY L+ V++G +  +++ L+T  Q + + + ++
Sbjct: 302 ERIRTYNYPQSRITDHRINLTLYSLDKVMEGELAPLVDALVTHAQTEALKAQAD 355


>gi|289423330|ref|ZP_06425138.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
           653-L]
 gi|289156261|gb|EFD04918.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
           653-L]
          Length = 354

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 173/354 (48%), Positives = 249/354 (70%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L++++ E+  ++++   +     + KL +E + + PI+ K   Y +  +   +
Sbjct: 1   MLDKLMVLEDKYKELSEKVADPEIISDQPTWQKLMKENSELEPIVMKYREYRKVNETIAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD ++R+LA++E+   E +I ++E+E+  LL+PKD +D+K+ I+EIR G G
Sbjct: 61  SKQIL-EEESDEDLRELAKMELSEAESQIVDIEDELKLLLVPKDPNDEKNVIVEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  + WK  ++SS++   GGYKE+   I G+G +SR+K+ESG
Sbjct: 120 GDEAALFAGDLFRMYSRYAERKGWKTSLMSSNETGVGGYKEVSFLIKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE+ GR+HTS ATVAVLPE  +++V I  ED+R D  RASG+GGQ VNTTD
Sbjct: 180 VHRVQRIPTTESGGRIHTSTATVAVLPEVDDVEVQINPEDLRFDVFRASGNGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG +V    EKSQ +N+ +A+KVL+ARLYD        E SA RK Q+G+G
Sbjct: 240 SAVRLTHIPTGEVVSCQDEKSQLKNKEKALKVLKARLYDRALADQQKEISAERKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGR++DHRINLTLYKL+  + G ID++I+ L+T  QA+ + S
Sbjct: 300 DRSERIRTYNFPQGRVSDHRINLTLYKLDSFIDGDIDEMIDGLITVDQAEKMSS 353


>gi|148378145|ref|YP_001252686.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|153932228|ref|YP_001382546.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936703|ref|YP_001386098.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
 gi|166223548|sp|A7FQG2|RF1_CLOB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223549|sp|A5HY35|RF1_CLOBH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148287629|emb|CAL81694.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|152928272|gb|ABS33772.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|152932617|gb|ABS38116.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
          Length = 358

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 245/356 (68%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++N++ E+  ++S+   +     + KL +E+A +  I++    Y + +++ + 
Sbjct: 1   MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E+R++AQ E+  +  ++ +LE E+  LLLPKD +DDK   +EIRAG G
Sbjct: 61  DKEMLKEE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L RMY RYA  + WKVE +S +  D GG+KE+   + G+G +SR+K+ESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D++I   D+RID  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +N+ +AMKVL+ARL++      A   + +RK Q+G+G
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGRITDHRI LTLYKLE  L G ID+ I  L+T  QA+ +    
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQAEKMKDLG 355


>gi|85059854|ref|YP_455556.1| peptide chain release factor 1 [Sodalis glossinidius str.
           'morsitans']
 gi|119361611|sp|Q2NRS4|RF1_SODGM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84780374|dbj|BAE75151.1| peptide chain release factor RF-1 [Sodalis glossinidius str.
           'morsitans']
          Length = 360

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 248/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+E+ + +   +     +  L++EYA +S +      + Q ++
Sbjct: 1   MKSSIVAKLEALQERREEVEVLLGDPGVISDQIRFRALSKEYAQLSDVTRCFQHWWQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+RD+AQ E+LA    + +LE ++  LLLP+D DD++ C LE+R
Sbjct: 61  DIHTAEHLLQ----DPEMRDMAQEELLASGASLEQLEQQLQVLLLPRDPDDERGCFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA  R+WKVE++S+S  + GG+KE++A +S  G +  +K
Sbjct: 117 AGTGGDEAALFAGDLFRMYSRYAETRRWKVEIVSASYGEHGGFKEVIAKVSHEGAYGLLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG++V    E+SQH+N+ +A+ VL ARL   E +R   E S+ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGLVVECQDERSQHKNKAKALAVLGARLRAAEVQRRQQEESSTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYNF QGR+TDHRI LTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRIRTYNFPQGRVTDHRIGLTLYRLDEVIEGKLDMLIQPIMQEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|152977515|ref|YP_001377032.1| peptide chain release factor 1 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189039958|sp|A7GV79|RF1_BACCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152026267|gb|ABS24037.1| peptide chain release factor 1 [Bacillus cytotoxicus NVH 391-98]
          Length = 355

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 168/356 (47%), Positives = 246/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ ++   +S+   ++   KL   ++E + I   +     Y   +++ QD
Sbjct: 1   MLDRLQAVEDRYEKLNELLSDPAVINDSNKLREYSKEQSDIQETVEVYREYKDVREQLQD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+E+R++ + EV  +E + +EL + +  LL+PKD +DDK+ I+EIR   G
Sbjct: 61  AKAMLEDK-LDAEMREMVKEEVSDLEVQEKELSDRLKILLVPKDPNDDKNVIVEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY RYA ++ WK +++ +S  + GGYKEI+  I+G+G ++++KFE+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEMQGWKTDIIEASYTELGGYKEIIFMINGKGAYAKLKFENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFRQEAQAEYDQNRKQAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QAK + +A 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAKKMEAAE 355


>gi|296505754|ref|YP_003667454.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
 gi|46576766|sp|Q812I4|RF1_BACCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|296326806|gb|ADH09734.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
          Length = 355

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 166/356 (46%), Positives = 243/356 (68%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+E+R++ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   G
Sbjct: 61  AKAMLEDK-LDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 355


>gi|332299913|ref|YP_004441834.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176976|gb|AEE12666.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 368

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 152/360 (42%), Positives = 225/360 (62%), Gaps = 12/360 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           +I  L  R  E+E  +++   +     +  L++EY  +  I+     Y Q   ++++  +
Sbjct: 7   RIEALVARHEELETLITDPNVIADGRRFATLSKEYTHLGEILKAGGQYKQLLTQQEEAES 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            + D +SD E++ +A+  +   ++EI ++E EI  LLLP D +DDK+ ILE+RAGTGG E
Sbjct: 67  TLQDTDSDEELKAMARELLAEAKEEIPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RY   + W V V S ++   GGYKEIV  ++G GV+  +K+ESGVHR
Sbjct: 127 AALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GR+HTSAATVAVLPEA + +V+I   +I+ DT R+SG+GGQ+VN  +S V
Sbjct: 187 VQRVPQTETQGRIHTSAATVAVLPEADKFEVNINEGEIKWDTFRSSGAGGQNVNKVESGV 246

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ +              +  +  + Q +N+ RA+  LR  +YD E ++  +E ++ RK 
Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDEIASRRKT 306

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS +IRTYNF QGR+TDHRI LT++ L  VL G +  II+ L+ A   + +  A
Sbjct: 307 MVSTGDRSAKIRTYNFPQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAENTERLKEA 366


>gi|103488191|ref|YP_617752.1| peptide chain release factor 1 [Sphingopyxis alaskensis RB2256]
 gi|119361612|sp|Q1GPK3|RF1_SPHAL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|98978268|gb|ABF54419.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingopyxis
           alaskensis RB2256]
          Length = 355

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 181/359 (50%), Positives = 262/359 (72%), Gaps = 6/359 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M  +S +QI  +  R A ++ RM+    +   ++  ++E+A + P+ +      + ++E 
Sbjct: 1   MTSVSARQIDAIIERHAALQARMATGDMAPADFVAASKEFAELEPVATAAREVVRLREEL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L+ ++     D E++ +A  E+ A+E  +   E+++   LLPKD  D ++ +LEIRAG
Sbjct: 61  VALNEMLA----DPEMKAMAVEEIAAVEAALPAAEHDLALQLLPKDVADSRAAMLEIRAG 116

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDL RMY RYA  + WKVE++S+++ + GGYKE+VA++SG+GVF+++KFE
Sbjct: 117 TGGDEAALFAGDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVASVSGQGVFAKLKFE 176

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTSAATVAVLPEA E+DV I   D++ID  RASG+GGQHVNT
Sbjct: 177 SGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVAINDSDLKIDIYRASGAGGQHVNT 236

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSA+RITHIPTG++V    ++SQH+NR +AM+VLRARLYD+ER+++ +  ++ RK  +G
Sbjct: 237 TDSAIRITHIPTGLVVIQQDQRSQHKNRAKAMQVLRARLYDLEREKLHSAEASARKSMVG 296

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF QGR+TDHRINLTL++L  +L+G +D++I+ L+   QA+ +    E
Sbjct: 297 SGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGAMDELIDALIAEDQAQRLAGLGE 355


>gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12]
 gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12]
          Length = 361

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 162/362 (44%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S+   +   D +  L++EY+ +  +++    + Q  +
Sbjct: 1   MKDSVIRKLEGLLERNEEVLALLSDPGVISDQDRFRALSKEYSQLEDVVATFKAFQQATE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ +  +D EI+++AQ E+   +  I +LE+E+  LLLPKD +DD +  +EIR
Sbjct: 61  DLDAAKEMLSE--NDPEIKEMAQEEMKDAKSIIVKLEDELQILLLPKDPNDDNNAFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDL+RMY RY    +W+ E++++++ + GG+KE++  +SG GV+ R+K
Sbjct: 119 AGAGGDEAAIFAGDLYRMYTRYFETNRWQTEIMNANEGEHGGFKEVIIKVSGEGVYGRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVL E  E +       D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVLAEVPEAEAIKINPADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+THIP+GI+V    ++SQH+NR +AM VL AR+  VE ++  +     R+ 
Sbjct: 239 VNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSAEETTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR++DHRINLTLY+L  V++G +D +I PL+  +QA M+ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVSDHRINLTLYRLNDVMEGELDVLIVPLMQENQADMLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|323527482|ref|YP_004229635.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
 gi|323384484|gb|ADX56575.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
          Length = 356

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 176/358 (49%), Positives = 251/358 (70%), Gaps = 9/358 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L  R AE+   +S      ++D Y KLT E+A + P++   +++ Q   +   
Sbjct: 1   MQHKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMHDAAT 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    +D+ +RD A+ E+ A    + +L  E+  +LLPKD +DD++  LEIRAGTG
Sbjct: 61  AQELL----TDASMRDFAEEEIRAARDRMEQLGGELQTMLLPKDPNDDRNIFLEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E+ALF GDL RMY RYA   +W+VE++S+S++D GGYKE++  I+G   +S++KFESG
Sbjct: 117 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HRVQRVPATE  GR+HTSA TVAV+PEA EI +V+I   D+RIDT RASG+GGQH+N T
Sbjct: 177 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 236

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+TH+PTGI+V    ++SQH+N+ RA+KVL AR+ D +      + +A RK  IGS
Sbjct: 237 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF QGR+TDHRINLTLY+L+ ++ G +D++I  L++ HQA+++ S  +
Sbjct: 297 GDRSERIRTYNFPQGRLTDHRINLTLYRLDAIMDGDLDELIGALVSEHQAELLASLGD 354


>gi|313886402|ref|ZP_07820124.1| peptide chain release factor 1 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924148|gb|EFR34935.1| peptide chain release factor 1 [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 368

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 151/360 (41%), Positives = 225/360 (62%), Gaps = 12/360 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E+E  +++   +     +  L++EY  +  I+     Y Q   ++++  +
Sbjct: 7   RVEALVARHEELETLITDPNVIADGRRFATLSKEYTHLGEILKAGGQYKQLLTQQEEAES 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            + D +SD E++ +A+  +   ++EI ++E EI  LLLP D +DDK+ ILE+RAGTGG E
Sbjct: 67  TLQDADSDEELKAMARELLAEAKEEIPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RY   + W V V S ++   GGYKEIV  ++G GV+  +K+ESGVHR
Sbjct: 127 AALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GR+HTSAATVAVLPEA + +V+I   +I+ DT R+SG+GGQ+VN  +S V
Sbjct: 187 VQRVPQTETQGRIHTSAATVAVLPEADKFEVNINEGEIKWDTFRSSGAGGQNVNKVESGV 246

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ +              +  +  + Q +N+ RA+  LR  +YD E ++  +E ++ RK 
Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDEIASRRKT 306

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS +IRTYNF QGR+TDHRI LT++ L  VL G +  II+ L+ A   + +  A
Sbjct: 307 MVSTGDRSAKIRTYNFPQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAENTERLKEA 366


>gi|229064980|ref|ZP_04200278.1| Peptide chain release factor 1 [Bacillus cereus AH603]
 gi|228716281|gb|EEL67993.1| Peptide chain release factor 1 [Bacillus cereus AH603]
          Length = 358

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+++RD+ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++++I  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEINIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|229164277|ref|ZP_04292210.1| Peptide chain release factor 1 [Bacillus cereus R309803]
 gi|228619217|gb|EEK76110.1| Peptide chain release factor 1 [Bacillus cereus R309803]
          Length = 358

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+E+R++ + EV  +E + +EL   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDAEMREMVKEEVSELEGQDKELSARLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|119775698|ref|YP_928438.1| peptide chain release factor 1 [Shewanella amazonensis SB2B]
 gi|166223600|sp|A1S8R2|RF1_SHEAM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119768198|gb|ABM00769.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           amazonensis SB2B]
          Length = 363

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 165/362 (45%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S++  +   D +  L++EYA +  ++     Y Q   
Sbjct: 1   MKESVIRKLEGLLERNEEVLALLSDASIISDQDRFRALSKEYAQLEDVVKGFKAYQQAVA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E++++AQ E+ + +  +  LE E+  LLLPKD +D+ +  +EIR
Sbjct: 61  DLETAKEML--EEDDPELKEMAQEEIKSAKASLERLEAELQILLLPKDPNDEANAFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  ++W+VE++S+++ + GGYKE++A  SG  V+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAETQRWQVEIMSANEGEHGGYKEVIARFSGERVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVL E  E +  +I   ++RIDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVLHEVPEAEAVEINPSELRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG +V    E+SQH+N+ RAM VL ARL   E ++  +  +  R+ 
Sbjct: 239 VNKTDSAIRITHLPTGTVVECQDERSQHKNKARAMSVLVARLQAAEDEKRRSAEATTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR++DHRINLTLY+L  V++G ++ +I P++  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVSDHRINLTLYRLNEVMEGDLNALIEPIVQEHQADLLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|327481907|gb|AEA85217.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 4166]
          Length = 360

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 241/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++RF E+   + ++  +     +   + EYA + P+I       + +Q
Sbjct: 1   MKASLLNKLDILQDRFEELTALLGDAEVISDQNRFRAYSREYAEVEPVIVAYRQLCKVQQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A+ EV   + ++  LE  +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W+VE+LS S+ + GGYKE+++ + G  V++++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E    +I   D+RIDT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPADLRIDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR +A+  L A+L D +      E S  RKL
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALAWLAAKLQDRQDAAAHKEISETRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHR+NLTLY L  V+ G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLNEVIGGAVEQVIEPLLQEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|121997785|ref|YP_001002572.1| peptide chain release factor 1 [Halorhodospira halophila SL1]
 gi|166223563|sp|A1WVQ8|RF1_HALHL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121589190|gb|ABM61770.1| bacterial peptide chain release factor 1 (bRF-1) [Halorhodospira
           halophila SL1]
          Length = 363

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 248/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +  R  EI  ++++   V     + +L+ EYA + P++  ++ Y  +  
Sbjct: 1   MKATIRNKLERMAERHEEIGAQLADPDVVGDPSKFAELSREYARLEPVVQDLNAYRAEAD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  ++ D   D+EIR LA+ E+   ++ + ELE  +   L+P D +D ++  LE+R
Sbjct: 61  TVASAEAMLND--GDAEIRALAEQELAEAQRRLEELEGALQRHLVPTDPNDQRNIFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAALF GDL RMY RYA  + WK E+LS+ + + GGY+E++A +SGR V++R+K
Sbjct: 119 AGAGGDEAALFAGDLLRMYMRYAERQGWKTEILSAREGEHGGYREVIARVSGRSVYARLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVA+LPE      +++   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAILPELDEVSAIEVNTADLRVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+P+G++V    E+SQ++NR +A+ +L+ARL + ER +  +ERS  R+L
Sbjct: 239 VNTTDSAIRITHLPSGLVVECQDERSQNKNRAKAIALLQARLTEQERAKQQSERSEQRRL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRI LTLYKLE V++G +D++++ L   HQA+ +   
Sbjct: 299 AVGSGDRSERIRTYNFPQGRVTDHRIGLTLYKLEQVMEGGMDELLDGLTQEHQAEALAEI 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|197284958|ref|YP_002150830.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
 gi|238693176|sp|B4EVR7|RF1_PROMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194682445|emb|CAR42344.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
          Length = 360

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ EI+  ++E+  +   + +  L++EYA ++ I S    + + + + +    
Sbjct: 8   KLEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDITSCYRQWRKVQDDMEAAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++AQ E+   +    ELE ++  LLLPKD DD+ +C LEIRAGTGG E
Sbjct: 68  ML----DDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W++EV+++++ + GGYKEI+A + G G +  +KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAVLPE  E +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+  +GSGDR
Sbjct: 244 IRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQEAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++T +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDALIQPIVTEYQADQLSALSE 358


>gi|119472532|ref|ZP_01614580.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
           TW-7]
 gi|119444856|gb|EAW26156.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
           TW-7]
          Length = 361

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    + ++  L  R+ E++  +S+   +     +  L++EY+ +  I+     Y Q K+
Sbjct: 1   MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLAYQQTKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ D  SD ++R++AQ E    + +I  LE+EI  L+LPKD  D+ +  LE+R
Sbjct: 61  DLASAEEMLKD--SDPDMREMAQEEYKEAKAQILSLEDEIQVLMLPKDPKDNNNVFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY R+A  +KWK+EV+++++ + GGYKE++A ISG GV+ ++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANISGEGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GRVHTSA TVAV+        ++I   DI++DT RASG+GGQH
Sbjct: 179 FESGVHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM VL ARL   E ++     ++ R+ 
Sbjct: 239 VNKTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGRITDHRINLTLY+L  V+ G +  I++PL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRITDHRINLTLYRLNEVVAGDLGAIVDPLMQEHQADLLAAM 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|227355360|ref|ZP_03839761.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
 gi|227164584|gb|EEI49455.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
          Length = 360

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ EI+  ++E+  +   + +  L++EYA ++ + S    + + + + +    
Sbjct: 8   KLEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDVTSCYRQWRKVQDDMEAAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++AQ E+   +    ELE ++  LLLPKD DD+ +C LEIRAGTGG E
Sbjct: 68  ML----DDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W++EV+++++ + GGYKEI+A + G G +  +KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAVLPE  E +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+  +GSGDR
Sbjct: 244 IRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQEAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++T +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDALIQPIVTEYQADQLSALSE 358


>gi|229014499|ref|ZP_04171617.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048]
 gi|229136148|ref|ZP_04264901.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196]
 gi|229170037|ref|ZP_04297729.1| Peptide chain release factor 1 [Bacillus cereus AH621]
 gi|228613462|gb|EEK70595.1| Peptide chain release factor 1 [Bacillus cereus AH621]
 gi|228647307|gb|EEL03389.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196]
 gi|228746849|gb|EEL96734.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048]
          Length = 358

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+++RD+ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++++I  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEINIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
 gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
          Length = 361

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 251/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AEI   ++   + +      +L++EY+ + P+      +   + 
Sbjct: 1   MKASFRNKLEGLAERHAEIAQLLATPDAAEDADQLRRLSQEYSQLEPVAEAWKAWHDNQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++ +   D E+R +A+ E+  +  +   LE E++  L+PKD  D+ +  LEIR
Sbjct: 61  ALEEARAMLAE--DDPELRAMAEAEIETLADQAEALEAELHRHLIPKDPHDNANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDL RMY RYA  + WK+E+LS+S+ + GGY+E++A ++G+G +SR+K
Sbjct: 119 AGTGGDEAAIFAGDLLRMYTRYAEQQNWKLEILSASEGEHGGYREVIARLAGQGAYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSAATVA+LPE  E+++ DI   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSAATVAILPELDEVEMPDINPADLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+PTGI+V    E+SQH+NR +AM  L ARL++ ER+  A  +SA RK 
Sbjct: 239 VNKTDSAVRLTHLPTGIVVECQEERSQHKNRAKAMTYLAARLFEAEREAQAAAQSAERKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKLE V+ G +D +I+PL+  +QA+ + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEQVMAGDLDPVIDPLIHEYQAEQLATL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|187935755|ref|YP_001884696.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
           17B]
 gi|238691625|sp|B2TJY5|RF1_CLOBB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187723908|gb|ACD25129.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
           17B]
          Length = 360

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 170/357 (47%), Positives = 250/357 (70%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N++ E+ +++S+   +   + + KL +E A +  I++    Y Q  ++ Q
Sbjct: 1   MLLDKLAFIENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQ 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++ D  SD E++++   E+ ++ +   ELE EI  LLLPKD +DDK+  +EIR G 
Sbjct: 61  VNKEMLSDE-SDREMKEMLNEEIASLSQREVELEKEIQILLLPKDPNDDKNVFVEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMY RYA  ++W  E++S ++ D GG+KE+V  I G G +S++K+ES
Sbjct: 120 GGEEAALFAYNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTS  TVAVLPE  +++++I  +D+RID  RASG GGQ VNTT
Sbjct: 180 GVHRVQRVPDTESSGRIHTSTVTVAVLPEVDDVEIEIADKDVRIDVFRASGHGGQCVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+G++V    EKSQ +N+ +AMKVLR+RL++   +  A+  +A+RK Q+G+
Sbjct: 240 DSAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERADGIAADRKSQVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGRITDHRI LTLYKL+  L G + ++IN L+TA QA+ +    
Sbjct: 300 GDRSERIRTYNYPQGRITDHRIGLTLYKLDSFLDGDVQEMINALITADQAEKMQKMG 356


>gi|30023360|ref|NP_834991.1| peptide chain release factor 1 [Bacillus cereus ATCC 14579]
 gi|206970257|ref|ZP_03231210.1| peptide chain release factor 1 [Bacillus cereus AH1134]
 gi|218236058|ref|YP_002370106.1| peptide chain release factor 1 [Bacillus cereus B4264]
 gi|228924065|ref|ZP_04087341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955577|ref|ZP_04117579.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961593|ref|ZP_04123202.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229051000|ref|ZP_04194549.1| Peptide chain release factor 1 [Bacillus cereus AH676]
 gi|229072796|ref|ZP_04205995.1| Peptide chain release factor 1 [Bacillus cereus F65185]
 gi|229082544|ref|ZP_04215007.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
 gi|229112743|ref|ZP_04242276.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
 gi|229130579|ref|ZP_04259535.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
 gi|229147870|ref|ZP_04276211.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
 gi|229153493|ref|ZP_04281671.1| Peptide chain release factor 1 [Bacillus cereus m1550]
 gi|229181577|ref|ZP_04308903.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
 gi|229193581|ref|ZP_04320525.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
 gi|29898921|gb|AAP12192.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus cereus
           ATCC 14579]
 gi|206734834|gb|EDZ52003.1| peptide chain release factor 1 [Bacillus cereus AH1134]
 gi|218164015|gb|ACK64007.1| peptide chain release factor 1 [Bacillus cereus B4264]
 gi|228589886|gb|EEK47761.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
 gi|228601945|gb|EEK59440.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
 gi|228630097|gb|EEK86748.1| Peptide chain release factor 1 [Bacillus cereus m1550]
 gi|228635520|gb|EEK92009.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
 gi|228652918|gb|EEL08800.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
 gi|228670724|gb|EEL26035.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
 gi|228700976|gb|EEL53499.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
 gi|228710287|gb|EEL62262.1| Peptide chain release factor 1 [Bacillus cereus F65185]
 gi|228722377|gb|EEL73773.1| Peptide chain release factor 1 [Bacillus cereus AH676]
 gi|228798075|gb|EEM45079.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804105|gb|EEM50722.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228835555|gb|EEM80920.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 358

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+E+R++ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|92116091|ref|YP_575820.1| peptide chain release factor 1 [Nitrobacter hamburgensis X14]
 gi|119361567|sp|Q1QQY7|RF1_NITHX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91798985|gb|ABE61360.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           hamburgensis X14]
          Length = 361

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 192/358 (53%), Positives = 256/358 (71%), Gaps = 2/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L  R A +E  +    S + Y+++T E + ++P++  +  +   K E  
Sbjct: 1   MSSLPEAKLDILLARHAALENELLSQISAERYVQMTRELSELNPVVEAVKNWRAVKTEIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            +  +I D  +D+E+R +A+ E  A+     EL  +I   LLPKD  D+++ +LEIRAGT
Sbjct: 61  GIDAMIADPATDAEMRAMAEAERPALGARGDELAQKIRVALLPKDAMDERNVMLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYER+A L+ WKVE +S+S+   GGYKEIVA + GRG ++++KFES
Sbjct: 121 GGDEASLFAGDLFRMYERFAGLQGWKVEAISASEGTMGGYKEIVAEVRGRGAYAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GRVHTSAATVAVLPEA E+DVDI  +D+RI+TMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDVDIKTDDLRIETMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITHIPTGI+V     +SQH+NR  AM +LR+R+YD ER+R+   RSA+RK Q+GS
Sbjct: 241 ESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRINAARSADRKDQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQA  + +  
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQAAQLATEG 358


>gi|163943017|ref|YP_001647901.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4]
 gi|229470347|sp|A9VSC7|RF1_BACWK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163865214|gb|ABY46273.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4]
          Length = 355

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 165/356 (46%), Positives = 243/356 (68%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+++RD+ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   G
Sbjct: 61  AKAMLEDK-LDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E++++I  +D+R+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEINIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 355


>gi|88861344|ref|ZP_01135974.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
 gi|88816610|gb|EAR26435.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
          Length = 361

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 253/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M    ++++  L  R+ E+E  +SE+  +   D +  L++EYA +  +    + Y Q +Q
Sbjct: 1   MKESVYRKLETLVERYEEVEALLSEASVISDQDRFRALSKEYAELEDVSKVFNAYRQAEQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  D   D ++RD+AQ E  A + ++  L +E+  L+LPKD  D+ +  LE+R
Sbjct: 61  DLVAAEEMFKDE--DPDMRDMAQDEFKAAKAQLETLTDELQVLMLPKDPKDNNNVYLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY R+A  +KWKVE++S+++ + GGYKE++A ISG GV+ ++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYARFAETQKWKVEIVSANEGEHGGYKEVIANISGTGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GRVHTSA TVAV+PE  E + ++I   DI++DT RASG+GGQH
Sbjct: 179 FESGVHRVQRVPETESQGRVHTSACTVAVMPEIPEAEAIEINAADIKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    E+SQH+NR +AM VL +RL   E ++   E +  R+ 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSVLASRLQQAEDEKRHAEEATQRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGRITDHRINLTLYKL  ++ G +  IINPL+  HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRITDHRINLTLYKLNEIVSGDLLPIINPLVQEHQADLLAAM 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|197120814|ref|YP_002132765.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
 gi|238689845|sp|B4UAY8|RF1_ANASK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|196170663|gb|ACG71636.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
          Length = 370

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 236/354 (66%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++  ++ RF E+   +S+       D + K+ +E A+I   ++ +  Y +  ++ +   
Sbjct: 8   KKLEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLEDVEGNE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+R+LA+ E+  +  ++   E ++   L+PKD +D+K  I+EIRAG GG 
Sbjct: 68  ALLADK--DPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF  ++ RMY RYA  R W+VE++ +S    GG KE   T+SG  V+S +K+ESGVH
Sbjct: 126 EAGLFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTS  TVAV+PEA EIDV +   D+ +D  R++GSGGQ VNTTDSA
Sbjct: 186 RVQRVPATEAQGRIHTSTVTVAVMPEAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI+V    EKSQ +NR  AMK+LRA+L+++E++R  + R A RK Q+G+GDR
Sbjct: 246 VRLTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKSQVGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF Q R+TDHR+N T + L  V+ G + D+I+   T + A+ +  AS
Sbjct: 306 SEKIRTYNFPQDRLTDHRVNYTRHNLPAVMDGDVQDVIDACRTFYAAQALREAS 359


>gi|30265352|ref|NP_847729.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
 gi|42784501|ref|NP_981748.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
 gi|47530891|ref|YP_022240.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|222098801|ref|YP_002532859.1| peptide chain release factor 1 [Bacillus cereus Q1]
 gi|46576768|sp|Q81JX1|RF1_BACAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214595|sp|Q630R9|RF1_BACCZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214623|sp|Q6HAV4|RF1_BACHK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214641|sp|Q72XC2|RF1_BACC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790861|sp|B9IRW2|RF1_BACCQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|30260030|gb|AAP29215.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
 gi|42740433|gb|AAS44356.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
 gi|47506039|gb|AAT34715.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|221242860|gb|ACM15570.1| peptide chain release factor 1 [Bacillus cereus Q1]
          Length = 355

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 166/356 (46%), Positives = 243/356 (68%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+E+R++ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   G
Sbjct: 61  AKAMLEDK-LDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRMEAAE 355


>gi|242239290|ref|YP_002987471.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
 gi|242131347|gb|ACS85649.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
          Length = 361

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 245/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + +   +   D +  L+ EYA ++ I      + Q + +      
Sbjct: 8   KLEALQERHEEVQALLGDPSIISDMDRFRMLSREYAQLTDITRCFQRWQQAQDDIATAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+    +    LE ++  LLLP+D DD++ C LEIRAGTGG E
Sbjct: 68  LL----DDPEMREMAQDELKEAREAGDTLEQQLKVLLLPRDPDDERGCFLEIRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+SD + GGYKE++A + G G + ++KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEMVSASDGEHGGYKEVIAKVIGEGAYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPVDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E ++   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + +E
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEAIEGKLDMLIQPIVQEYQADQLAALAE 358


>gi|319650894|ref|ZP_08005031.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
 gi|317397492|gb|EFV78193.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
          Length = 357

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+  +   +S+   V+   KL   ++E + I   +     Y + K++ QD  
Sbjct: 3   DRLQSVEDRYERLNELLSDPEIVNDPKKLREYSKEQSGIQETVDTYREYKEVKEQYQDAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+R++ + E+  +E+   +LE  +  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 63  AML-EEKLDAEMREMVKEELAELEERKEDLEARLKILLIPKDPNDDKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK++V+ +S    GGYKEI+  I+G G +S++KFE+G H
Sbjct: 122 EAALFAGDLYRMYSRYAETQGWKIDVIEASSTGVGGYKEIIFMINGNGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG +V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 242 VRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQQRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +D++I+ L+   Q+  + SAS
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIVEEQSAKLDSAS 355


>gi|183598963|ref|ZP_02960456.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
 gi|188021179|gb|EDU59219.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
          Length = 360

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 248/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ EI+  ++++  +     +  L++EYA ++ +    + +   +++ +    
Sbjct: 8   KLEALQERYEEIQAHLADAGVIADQGRFRALSKEYAQLTDVAKCFTAWRTVQEDIETAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++AQ E+   +    ELE ++  LLLPKD DD+ +C LEIRAG GG E
Sbjct: 68  ML----DDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFLEIRAGAGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA   +W+VE++S+SD + GG+KE++A ISG  V+ R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAEANRWRVELMSTSDGEHGGFKEVIAKISGESVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVA+LPE  E +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAILPELPEAELPEINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQAAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDALIQPIINEYQADQLSALSE 358


>gi|302879738|ref|YP_003848302.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
 gi|302582527|gb|ADL56538.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
          Length = 362

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 237/355 (66%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E+   +S       +D Y KL  E A + P++     Y   + +      
Sbjct: 8   KLGQLSERLLEVNQLLSTEEATRDMDTYRKLNRERAELEPVVDLFHAYQACEGDIAAARE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D E+R+ A  E+   E ++  L+ E+   LLPKD +D++S  LE+RAGTGG E
Sbjct: 68  MAE----DPEMREFADTEIKEGEAKLALLDKELQTQLLPKDPNDERSVFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY R+A  R+W+VEV+S S  + GGYKEI+A I+G+G +S +KFESG HR
Sbjct: 124 AALFAGDLFRMYSRFAERRRWQVEVVSESPGEMGGYKEIIARIAGQGAYSVLKFESGAHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE  GRVHTSA TVA++PE  E++  +    D+RIDT RASG+GGQH+N TDSA
Sbjct: 184 VQRVPATETQGRVHTSACTVAIMPEVDEVNDVVLNNADLRIDTFRASGAGGQHINKTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG++V     +SQHQN+ +AM+VL AR+ D + +    E +A RK  +GSGDR
Sbjct: 244 VRITHIPTGVVVECQDGRSQHQNKAQAMRVLCARIKDAQVRAQNAETAATRKSLVGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR+TDHRINLTLYK++ ++ G I ++   L+  HQA+ + + +E
Sbjct: 304 SERIRTYNYPQGRVTDHRINLTLYKMDAIMDGEISELTGALMAEHQAEQLAAMAE 358


>gi|218900455|ref|YP_002448866.1| peptide chain release factor 1 [Bacillus cereus G9842]
 gi|228903804|ref|ZP_04067920.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
 gi|228911168|ref|ZP_04074974.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
 gi|228942476|ref|ZP_04105013.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228968458|ref|ZP_04129447.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228975408|ref|ZP_04135964.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982045|ref|ZP_04142338.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
 gi|218545538|gb|ACK97932.1| peptide chain release factor 1 [Bacillus cereus G9842]
 gi|228777709|gb|EEM25983.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
 gi|228784390|gb|EEM32413.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228791238|gb|EEM38851.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228817218|gb|EEM63306.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228848531|gb|EEM93379.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
 gi|228855831|gb|EEN00375.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
 gi|326943127|gb|AEA19023.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 358

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+RD+ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AML-EEKLDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRMEAAE 358


>gi|86156794|ref|YP_463579.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|119361506|sp|Q2IMW2|RF1_ANADE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85773305|gb|ABC80142.1| bacterial peptide chain release factor 1 (bRF-1) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 370

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 235/354 (66%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++  ++ RF E+   +S+       D + K+ +E A+I   ++ +  Y +   +     
Sbjct: 8   KKLEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLDDVAGNE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++GD   D E+R+LA+ E+  +  ++   E ++   L+PKD +D+K  I+EIRAG GG 
Sbjct: 68  ALLGDK--DPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF  ++ RMY RYA  R W+VE++ +S    GG KE   T+SG  V+S +K+ESGVH
Sbjct: 126 EAGLFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTS  TVAV+PEA EIDV +   D+ +D  R++GSGGQ VNTTDSA
Sbjct: 186 RVQRVPATEAQGRIHTSTVTVAVMPEAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI+V    EKSQ +NR  AMK+LRA+L+++E++R  + R A RK Q+G+GDR
Sbjct: 246 VRLTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKSQVGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF Q R+TDHR+N T + L  V+ G + D+I+   T + A+ +  AS
Sbjct: 306 SEKIRTYNFPQDRLTDHRVNYTRHNLPAVMDGDVQDVIDACRTFYAAQALREAS 359


>gi|170717669|ref|YP_001784745.1| peptide chain release factor 1 [Haemophilus somnus 2336]
 gi|189039976|sp|B0UUE6|RF1_HAES2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168825798|gb|ACA31169.1| peptide chain release factor 1 [Haemophilus somnus 2336]
          Length = 360

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 252/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R  E+E  + ES  ++    +   ++EYA +  ++   + ++    
Sbjct: 1   MKASIISKLESLKERHEELEALLGESSVINDQDKFRAYSKEYAQLEDVVKCFARWNWLNN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D +++++A++E+   + EI   E ++  LLLPKD +D+ +  LEIR
Sbjct: 61  NIEETQLLL----DDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W+VEVL++++++ GGYKEI+  ++G GV+ ++K
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+V    E+SQH+N+ +A+ VL +R+   E++R A  ++  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQADTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS++IRTYN+ QGR+TDHRINLT+Y+L+ V+ G ID++I P++T +QA  +   
Sbjct: 297 LLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAML 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|163850388|ref|YP_001638431.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218528948|ref|YP_002419764.1| peptide chain release factor 1 [Methylobacterium chloromethanicum
           CM4]
 gi|240137464|ref|YP_002961935.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254559642|ref|YP_003066737.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
 gi|226739112|sp|A9W1A4|RF1_METEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790888|sp|B7L246|RF1_METC4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163661993|gb|ABY29360.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218521251|gb|ACK81836.1| peptide chain release factor 1 [Methylobacterium chloromethanicum
           CM4]
 gi|240007432|gb|ACS38658.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254266920|emb|CAX22719.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
          Length = 361

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 181/359 (50%), Positives = 250/359 (69%), Gaps = 3/359 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M  +   ++  +  R   +  ++++      + ++L+ E + +  +++ I  Y   +   
Sbjct: 1   MTPIPSDRLDAILARHDIVTAQLADGSADAGSIVQLSRELSELDGVVAAIHHYRLAEANL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             +  +I +   D E+R LA  E    E+ + +    +  +LLPKD  D+KS ILEIRAG
Sbjct: 61  AGIRAMIDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLILLPKDAADEKSAILEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY RYA  + W+VEV+S S+   GGY+E+VA + GR VFSR+KFE
Sbjct: 121 TGGDEAALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVVAEVKGRSVFSRLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE  GR+HTSAATVAVLPEA E+D+ +   D++IDTMRA G+GGQHVN 
Sbjct: 181 SGAHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDIVVNEADLKIDTMRAQGAGGQHVNK 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA+RITHIPTG++V    E+SQH+NR RAM +LR++L+D ER    + R+A+RK Q+G
Sbjct: 241 TESAIRITHIPTGVVVFVQEERSQHKNRARAMSLLRSKLFDAERTAKDSARAADRKAQVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHRINLTLYKLE V+ G  +D++I+ L+T HQA+++ +  
Sbjct: 301 SGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGQALDEVIDALVTEHQAELLAAEG 359


>gi|119505822|ref|ZP_01627888.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2080]
 gi|119458320|gb|EAW39429.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2080]
          Length = 362

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 164/361 (45%), Positives = 239/361 (66%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   + +  + +    + +L+ EY+ +  ++   + Y     
Sbjct: 1   MKSSLTAKLASLVDRHEEVAALLGDPETAEDTNLFRELSREYSQLDEVVVAFTAYRTATA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD E+R++A  E+    + + ++E+++  LLLP+D  D  +  LEIR
Sbjct: 61  DVEAAQEMLSD--SDPELREMAADELAVSTELVAKIESDLQVLLLPRDKRDSNNVYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W++E +S    D GG+KEI++ + G  V++ +K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAESKGWRLETISDRAGDHGGFKEIISRVVGNDVYAYLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+        +DI  ED+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVMAEPDDVEAIDIRKEDLRVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG++V    E+SQH+NR RAM +L ARL      +  +E++A R+ 
Sbjct: 239 VNTTDSAVRITHLPTGVVVECQDERSQHKNRARAMSLLSARLLTAAEDKAHSEQAAERRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ ++QG +D ++ PL T HQA ++ + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEIVQGQLDALVQPLRTEHQADLLAAL 358

Query: 356 S 356
            
Sbjct: 359 G 359


>gi|292493886|ref|YP_003529325.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
 gi|291582481|gb|ADE16938.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
          Length = 363

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 249/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L  R  E+   ++E    +    + + ++EYA + P+I     +++ + 
Sbjct: 1   MKDSIRSKLENLAERQQELAALLAEPEIANDQKQFREFSQEYAQLEPVIGCFRDFEETQN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   ++ D   D E+R LAQ EV   E+++ +L+ E+  LLLP D +D ++  LEIR
Sbjct: 61  ALNEAKALLKDQ--DPELRTLAQEEVAEAERKLEQLDQELQTLLLPSDPNDKRNIFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAALF  DL RMY RYA  R W+ E++S S  + GG+KE++  I G G +SR+K
Sbjct: 119 AGIGGDEAALFASDLLRMYLRYAEQRGWRKEIISDSPGEYGGHKEVIIRIVGEGAYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PEA EID  DI L D+RIDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPQTESQGRIHTSACTVAIMPEAEEIDDIDINLSDLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR+RAM +LRA+L   E  ++A E +A R+ 
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQDERSQHKNRVRAMSLLRAKLKSKEETKLAAEEAATRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +L+G+++ +I+PL+  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEILEGHLNAVIDPLIAEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|212640540|ref|YP_002317060.1| peptide chain release factor 1 [Anoxybacillus flavithermus WK1]
 gi|212562020|gb|ACJ35075.1| Protein chain release factor A [Anoxybacillus flavithermus WK1]
          Length = 361

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 236/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ ++   + +   ++   KL   ++E + ++  +     Y   +++  D  
Sbjct: 6   DRLEAVEARYEKLNELLMDPEVLNDPKKLRDYSKEQSDLAETVQTYREYKSVREQLADAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D ++RD+ + E+  +E+   +L  ++  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 66  AML-EEKLDPDMRDMVKEEISELEEREEQLVEKLKVLLLPKDPNDDKNVIMEIRGAAGGE 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK EV+ +     GGYKEI+  I G+G +S++KFE+G H
Sbjct: 125 EAALFAGDLYRMYTRYAESQGWKTEVIEAHPTGLGGYKEIIFMIQGKGAYSKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPE  EI+++I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVACLPEMEEIEIEINEKDIRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 245 VRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKYQQEARAEYDQTRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ VL+G +D+II+ L+   Q+K +  A+
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQVLEGKLDEIIDALILDDQSKKLEQAN 358


>gi|49188164|ref|YP_031417.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
 gi|49480414|ref|YP_039322.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140231|ref|YP_086598.1| peptide chain release factor 1 [Bacillus cereus E33L]
 gi|118480364|ref|YP_897515.1| peptide chain release factor 1 [Bacillus thuringiensis str. Al
           Hakam]
 gi|165871326|ref|ZP_02215975.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
 gi|167636684|ref|ZP_02394972.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
 gi|170688145|ref|ZP_02879356.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
 gi|170709368|ref|ZP_02899781.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
 gi|177651841|ref|ZP_02934424.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
 gi|217962818|ref|YP_002341396.1| peptide chain release factor 1 [Bacillus cereus AH187]
 gi|218906507|ref|YP_002454341.1| peptide chain release factor 1 [Bacillus cereus AH820]
 gi|225867310|ref|YP_002752688.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
 gi|227818092|ref|YP_002818101.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
 gi|228917938|ref|ZP_04081474.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930337|ref|ZP_04093341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936614|ref|ZP_04099408.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228949050|ref|ZP_04111322.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229094441|ref|ZP_04225513.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
 gi|229124833|ref|ZP_04254011.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
 gi|229142072|ref|ZP_04270597.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
 gi|229187555|ref|ZP_04314695.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
 gi|229199455|ref|ZP_04326118.1| Peptide chain release factor 1 [Bacillus cereus m1293]
 gi|229601300|ref|YP_002869544.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
 gi|254686248|ref|ZP_05150107.1| peptide chain release factor 1 [Bacillus anthracis str. CNEVA-9066]
 gi|254724243|ref|ZP_05186027.1| peptide chain release factor 1 [Bacillus anthracis str. A1055]
 gi|254735257|ref|ZP_05192966.1| peptide chain release factor 1 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744460|ref|ZP_05202140.1| peptide chain release factor 1 [Bacillus anthracis str. Kruger B]
 gi|254755798|ref|ZP_05207830.1| peptide chain release factor 1 [Bacillus anthracis str. Vollum]
 gi|254762138|ref|ZP_05213984.1| peptide chain release factor 1 [Bacillus anthracis str. Australia
           94]
 gi|301056797|ref|YP_003795008.1| peptide chain release factor 1 [Bacillus anthracis CI]
 gi|49182091|gb|AAT57467.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
 gi|49331970|gb|AAT62616.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973700|gb|AAU15250.1| peptide chain release factor 1 [Bacillus cereus E33L]
 gi|118419589|gb|ABK88008.1| bacterial peptide chain release factor 1 (bRF-1) [Bacillus
           thuringiensis str. Al Hakam]
 gi|164712993|gb|EDR18521.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
 gi|167527884|gb|EDR90706.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
 gi|170125716|gb|EDS94630.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
 gi|170667838|gb|EDT18590.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
 gi|172082545|gb|EDT67609.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
 gi|217065190|gb|ACJ79440.1| peptide chain release factor 1 [Bacillus cereus AH187]
 gi|218537315|gb|ACK89713.1| peptide chain release factor 1 [Bacillus cereus AH820]
 gi|225787237|gb|ACO27454.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
 gi|227005978|gb|ACP15721.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
 gi|228584031|gb|EEK42186.1| Peptide chain release factor 1 [Bacillus cereus m1293]
 gi|228595922|gb|EEK53602.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
 gi|228641361|gb|EEK97667.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
 gi|228658624|gb|EEL14286.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
 gi|228688978|gb|EEL42805.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
 gi|228810623|gb|EEM56972.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823049|gb|EEM68887.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829323|gb|EEM74956.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841735|gb|EEM86846.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229265708|gb|ACQ47345.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
 gi|300378966|gb|ADK07870.1| peptide chain release factor 1 [Bacillus cereus biovar anthracis
           str. CI]
 gi|324329278|gb|ADY24538.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 358

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+E+R++ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRMEAAE 358


>gi|220915515|ref|YP_002490819.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|254790857|sp|B8JAU2|RF1_ANAD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219953369|gb|ACL63753.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 370

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 236/354 (66%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++  ++ RF E+   +S+       D + K+ +E A+I   ++ +  Y +  ++ +   
Sbjct: 8   KKLEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLEDVEGNE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+R+LA+ E+  +  ++   E ++   L+PKD +D+K  I+EIRAG GG 
Sbjct: 68  ALLADK--DPELRELAKEELAQLRPQVDPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF  ++ RMY RYA  R W+VE++ +S    GG KE   T+SG  V+S +K+ESGVH
Sbjct: 126 EAGLFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTS  TVAV+PEA EIDV +   D+ +D  R++GSGGQ VNTTDSA
Sbjct: 186 RVQRVPATEAQGRIHTSTVTVAVMPEAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI+V    EKSQ +NR  AMK+LRA+L+++E++R  + R A RK Q+G+GDR
Sbjct: 246 VRLTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKSQVGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF Q R+TDHR+N T + L  V+ G + D+I+   T + A+ +  AS
Sbjct: 306 SEKIRTYNFPQDRLTDHRVNYTRHNLPAVMDGDVQDVIDACRTFYAAQALREAS 359


>gi|110640072|ref|YP_680282.1| peptide chain release factor 1 [Cytophaga hutchinsonii ATCC 33406]
 gi|119361529|sp|Q11NS4|RF1_CYTH3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110282753|gb|ABG60939.1| bacterial peptide chain release factor 1 (bRF-1) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 359

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 158/357 (44%), Positives = 229/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K+RF E+   + +   +     Y  L +EY  ++ I+   + Y       + 
Sbjct: 1   MVDKLEAIKSRFDEVAEAILDPNIMSDMKRYASLNKEYKELNKIVEVYAQYKNILDNIES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              V+     D + R++A+ E+  +  +  ++E  I  LL+PKD +D K+ ILEIR GTG
Sbjct: 61  SKKVLSVEK-DPDFREMAKEELETLAVQKDDIELVIKELLIPKDPNDSKNIILEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GD+FRMY+RY     WK+E++ +++   GGYKEI+  ISG  V+ ++KFESG
Sbjct: 120 GDEASIFAGDIFRMYQRYCDRMGWKMELIDATEGTSGGYKEIICGISGEDVYGKLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTSAA+VAVLPE  E+DV + + DIR DT  +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPATETQGRIHTSAASVAVLPEVEELDVQLNMNDIRKDTFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+R+THIP+G +V    EKSQ +N  +A+KVLR+R+Y++E K+  +E    R   IGSG
Sbjct: 240 SAIRLTHIPSGTVVQCQDEKSQIKNFEKALKVLRSRIYEIEYKKQQDELGKERNSMIGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS++IRTYN+ Q R+TDHRI  T++ L  V+ G IDD I  L  A  A+ +   ++
Sbjct: 300 DRSDKIRTYNYPQSRVTDHRIGHTVHNLPAVMDGNIDDFIEELRLAENAERLKEGAQ 356


>gi|124004130|ref|ZP_01688976.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
 gi|123990200|gb|EAY29699.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
          Length = 356

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+   + +  ++     Y KLT+EY  +  ++ K + Y    +    
Sbjct: 1   MIDKLEAIKERFDEVGQLIVKPETIQDMDLYTKLTKEYKDLEKVVEKYNEYKIVLENIDT 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E++++A++E+  +  +  ++E E+  LL+PKD +D K+ ILEIR G G
Sbjct: 61  SKEILS-TEKDPEMKEMAKMELEELNPQKEKIEEELKTLLIPKDPNDSKNVILEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDL RMY+R+A  RKWK E++  +D   GG+KE+V +ISG  V+  MK+ESG
Sbjct: 120 GDEAAIFAGDLLRMYQRFAEKRKWKFELMDFTDGSSGGFKEVVCSISGEDVYGMMKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GRVHTSAA+VAVLPE  +++V+I   D+R D   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPATETQGRVHTSAASVAVLPEMEDVEVNIDPSDVRSDYFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    EKSQ +N+ +AMKVLR++LY++E  +   E  A RK  +GSG
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKAKAMKVLRSKLYEIELSKQQEELGAQRKSMVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRS++IRTYN+ QGR+TDHRI  T++ L  V+ G I D I  L  A  A+ + S
Sbjct: 300 DRSDKIRTYNYPQGRVTDHRIKYTVHNLPNVMDGEIADFIESLRLADNAEKMKS 353


>gi|47570471|ref|ZP_00241104.1| peptide chain release factor 1 [Bacillus cereus G9241]
 gi|228988555|ref|ZP_04148642.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158891|ref|ZP_04286948.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
 gi|47552867|gb|EAL11285.1| peptide chain release factor 1 [Bacillus cereus G9241]
 gi|228624502|gb|EEK81272.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
 gi|228771172|gb|EEM19651.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 358

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+E+R++ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRMEAAE 358


>gi|300117843|ref|ZP_07055610.1| peptide chain release factor 1 [Bacillus cereus SJ1]
 gi|298724707|gb|EFI65382.1| peptide chain release factor 1 [Bacillus cereus SJ1]
          Length = 358

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+++R++ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDADMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRMEAAE 358


>gi|168185914|ref|ZP_02620549.1| peptide chain release factor 1 [Clostridium botulinum C str.
           Eklund]
 gi|169296113|gb|EDS78246.1| peptide chain release factor 1 [Clostridium botulinum C str.
           Eklund]
          Length = 357

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 249/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++   +N++ E+ +++S+   +   + + KL +E++ +  I++K   Y   K+E + 
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHSELETIVTKYREYKGNKEELEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D +++++ Q E+  +E+ I   E E+  LLLPKD +DDK+  +EIRAG G
Sbjct: 61  NKEMLSEE-TDKDMKEMIQEEIKTLEENIVTDEEELKILLLPKDPNDDKNVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA    WK E++S+++ D GG+KE+V  + G   +S+MKFESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D+ I   DIR+D  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    EKSQ +N+ +AMKVL+ARLY+      +   SA+RK Q+G+G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAERSASISADRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+T+HRI LTLYKLE  L G ++++I+ L+TA QA+ + +  
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQAEKMKAMG 355


>gi|86570230|gb|ABD04787.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris HaA2]
          Length = 373

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 182/358 (50%), Positives = 257/358 (71%), Gaps = 2/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E ++    + + Y+++T E + ++P++  +  Y + + E  
Sbjct: 13  MSNLPEAKLDVLLAHHASLEAQLLGEVAANDYVRITRELSELNPLVEAVKAYREVRDELG 72

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  ++ D  +D E+R +A+ E  A++    +L  +I   LLPKD  D+++ +LEIRAGT
Sbjct: 73  DIDDLLEDPATDPEMRAMAEAERDALDAHREDLIQQIRVALLPKDAMDERNVMLEIRAGT 132

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYE++AAL+ W VEV+S+S+   GG+KEI+A + GRG F+++KFES
Sbjct: 133 GGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFES 192

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  E+DVDI  +D++IDTMRA G+GGQHVN T
Sbjct: 193 GVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKPDDLKIDTMRAQGAGGQHVNKT 252

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITH+PTGI+V     +SQH+NR  AM +LR+R+YD E++R+ + RSA RK ++GS
Sbjct: 253 ESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRIDSARSAERKQKVGS 312

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQ   + +  
Sbjct: 313 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQVAQLAAQG 370


>gi|89073091|ref|ZP_01159630.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
 gi|89051044|gb|EAR56501.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
          Length = 362

 Score =  285 bits (728), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 165/362 (45%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +       + +  L++EY+ +  +      Y Q K+
Sbjct: 1   MKQSILVKLETLVERYEEVQHLLGDPSVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+   + EI  L +E+  LL+PKD +DD++C +EIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++E+++ + ++ GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAERRGWRIEIINENRSEQGGYKEMIAKVNGDGAYGILK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAVLPE  E +  +I   D+RIDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLRIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E ++   E ++ R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRNAEEASTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRI LTLY+L  V++G +D +I P+ T +QA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRITLTLYRLNEVMEGDLDALIQPVFTEYQADQLAAM 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|85713812|ref|ZP_01044802.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
 gi|85699716|gb|EAQ37583.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
          Length = 358

 Score =  285 bits (728), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 197/356 (55%), Positives = 260/356 (73%), Gaps = 2/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L   ++  L  R A +E  +    S D Y+++T E A ++P++  +  +     E   +
Sbjct: 1   MLPEAKLDLLLARHAALENELLSHVSADRYVQMTRELAELNPVVEAVKDWRAITAEIAGI 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I D  +D+E+R +A+ E  A+E    EL  +I   LLPKD  D+++ +LE+RAGTGG
Sbjct: 61  DAMIADPATDAEMRAMAEAERPALEARNNELMQQIRIALLPKDAMDERNVMLEVRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF GDLFRMYER+AAL+ WKVEV+S+S+   GGYKEIVA + GRG +++MKFESGV
Sbjct: 121 DEASLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAEVQGRGAYAKMKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GRVHTSAATVAVLPEA E+DV+I  +D+RI+TMRA G+GGQHVN T+S
Sbjct: 181 HRVQRVPDTEAQGRVHTSAATVAVLPEAEEVDVEIKPDDLRIETMRAQGAGGQHVNKTES 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITHIPTGI+V     +SQH+NR  AM +LR+R+YDVER+R+   RSA+RK Q+GSGD
Sbjct: 241 AIRITHIPTGIVVNMQDSRSQHKNRASAMNILRSRIYDVERQRINAARSADRKDQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQA  + + S
Sbjct: 301 RSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQAAQLAAES 356


>gi|85709577|ref|ZP_01040642.1| protein chain release factor A [Erythrobacter sp. NAP1]
 gi|85688287|gb|EAQ28291.1| protein chain release factor A [Erythrobacter sp. NAP1]
          Length = 355

 Score =  285 bits (728), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 181/357 (50%), Positives = 250/357 (70%), Gaps = 7/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +  +++  + NRFAE+E RM+      + ++  + +YA + P+          ++E + L
Sbjct: 3   IPPERLDQIANRFAELEARMASGTLEGEEFVAASRDYAELEPVAKIAGEVKAMREEIEGL 62

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E++ +A+ E+ AI + + E E  +   LLP+D  D K  +LEIRAGTGG
Sbjct: 63  EEMLA----DPEMKAMAEEELSAIREALPEKERSLAIALLPRDRADAKPAMLEIRAGTGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMYE+YAA + W+VE +S S ++ GG+KEIVA +SG+GVF+++KFESGV
Sbjct: 119 DEAALFAGDLFRMYEKYAAEQGWRVEPVSMSASEVGGFKEIVANVSGQGVFAKLKFESGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPE  E+DV I   D++IDT RASG+GGQHVNTTDS
Sbjct: 179 HRVQRVPVTESGGRIHTSAATVAVLPEPDEVDVQIDPGDLKIDTYRASGAGGQHVNTTDS 238

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITH PTG++V     +SQH+NR +AM+VLRARLY+  R       +  RK  +GSGD
Sbjct: 239 AIRITHEPTGLVVTCQDGRSQHKNREKAMQVLRARLYEKTRDEAQGAEAEARKAMVGSGD 298

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGR+TDHRI LTL+KLE VL G  +D++++ L+   + K + + +E
Sbjct: 299 RSERIRTYNFPQGRVTDHRIGLTLHKLEEVLAGPGLDELVDALIAEDEGKRLAALAE 355


>gi|325263710|ref|ZP_08130443.1| peptide chain release factor 1 [Clostridium sp. D5]
 gi|324030748|gb|EGB92030.1| peptide chain release factor 1 [Clostridium sp. D5]
          Length = 357

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 253/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   + E    +    + KL +E + ++PI+     Y + KQ  +D  
Sbjct: 3   DRLEDLLIRYEEVMGELQEPDVANDPVRFRKLMKEQSDLNPIVEAYREYKKSKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R++A+ E+   +  + ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  AMLEEESD-EEMREMAKEELNDSKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R+WKVE++S ++N  GG+KE V  I+G+G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYAEGRRWKVEMISLNENGIGGFKECVFMITGQGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAIMPEAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++L+D+E ++     +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDLELEKQQASEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL+KL+ +L G +D+II+ L+ A QA  + + +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQAAKLANMNE 356


>gi|297539749|ref|YP_003675518.1| peptide chain release factor 1 [Methylotenera sp. 301]
 gi|297259096|gb|ADI30941.1| peptide chain release factor 1 [Methylotenera sp. 301]
          Length = 360

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 184/362 (50%), Positives = 254/362 (70%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  EI   MS      ++D Y KLT+E+A I+PI+ +  +++Q + 
Sbjct: 1   MKPSMIRKLATLSERLEEINRLMSSEGVTNNMDNYRKLTQEHAEITPIVEQYHLFEQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++  +++    SD ++++ AQ E+ A ++++ ++E  +  LLLPKD +DDK+  LEIR
Sbjct: 61  DIKEAQSML----SDPDMKEFAQEEIEAGKEKLEQVEKSLQVLLLPKDPNDDKNLFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ LF GDLFRMY RYA  +KWKVE++S+++++ GGYKEI+A I G G +S++K
Sbjct: 117 AGTGGDESGLFCGDLFRMYSRYAEKQKWKVEIMSANESEVGGYKEIIAKIEGYGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAVLPEA E  DV I   DIRIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPDTETQGRIHTSACTVAVLPEADEVSDVVINPADIRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH PTGI+V     +SQH N+ +AM VL AR+   +     ++ ++ RK 
Sbjct: 237 INKTDSAVRITHAPTGIVVECQEGRSQHANKAQAMAVLAARIKAKQVDEQNSKIASERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGRITDHRINLTLYK++ + +G +D++I  L   HQA ++ S 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELIGALSAEHQADLLASL 356

Query: 356 SE 357
            E
Sbjct: 357 GE 358


>gi|323704815|ref|ZP_08116392.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535741|gb|EGB25515.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 353

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 180/355 (50%), Positives = 252/355 (70%), Gaps = 7/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ E+  ++S+      +D + K+ +E A +  I+ K   Y + K + + 
Sbjct: 1   MIDKLKAIEDRYVELSQKLSDPESMKDMDEWKKMAKEQAGLEEIVQKYREYKKVKDDIES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I     D E++D+A+ E+ ++E++   L NEI  LLLPKD +D+K  I+EIRAG G
Sbjct: 61  TKELI---EMDDELKDMAEDELKSLEEKEESLLNEIKLLLLPKDPNDEKDVIMEIRAGAG 117

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  ++WK E++SS+  + GG+KE++ +I+G+G +SR+KFESG
Sbjct: 118 GEEAALFAYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFSIAGKGAYSRLKFESG 177

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TEA GR+HTS ATVAVLPE  ++D++I   DI+ID  R+ G GGQ VNTTD
Sbjct: 178 VHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTD 237

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI++    E+SQ QNR RAMK+LRA+LY++ R+    E S  RKLQ+G+G
Sbjct: 238 SAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKEREISMTRKLQVGTG 297

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRI LTLYKL+ VL G +D+II+ LL   QA+ + S 
Sbjct: 298 DRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQAERLESM 352


>gi|148555445|ref|YP_001263027.1| peptide chain release factor 1 [Sphingomonas wittichii RW1]
 gi|166223608|sp|A5V9C3|RF1_SPHWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148500635|gb|ABQ68889.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingomonas
           wittichii RW1]
          Length = 360

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 185/358 (51%), Positives = 255/358 (71%), Gaps = 3/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEE 59
           M  ++  +I  ++ R  E++  M+        +++L+++YA I P+        + + E 
Sbjct: 1   MAGITSARIAQIEARRDELQALMARGDLPSDQFVQLSKDYAEIEPVAQAAGEVRRLRAEL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  +  D   D+E+R +A  E   I   + E E  +   LLP+D  D++S +LEIRAG
Sbjct: 61  DVLKGMAEDEAGDAELRAMAIEEAEEIRARLPEAERALALKLLPRDAADERSAMLEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY+RYA  R W+VE++S+S  D GGYKE+VA+++G GVF+R+KFE
Sbjct: 121 TGGDEAALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVASVTGAGVFARLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTSAATVAVLPEA E+DV I  +D+RID  R+SG GGQ VNT
Sbjct: 181 SGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVHIDDKDLRIDVYRSSGPGGQSVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    EKSQH+N+ +A+KVLR RLY++ER+R+A+ER+  RK  +G
Sbjct: 241 TDSAVRITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEMERERLASERAGARKSMVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           SGDRSERIRTYNF QGR+TDHRINLTL++L  +L+G  +DD++  L+   +A+ +   
Sbjct: 301 SGDRSERIRTYNFPQGRVTDHRINLTLHRLSEILEGPGLDDLVGALIAEDEAERLAQL 358


>gi|284047800|ref|YP_003398139.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
 gi|283952021|gb|ADB46824.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
          Length = 358

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 164/352 (46%), Positives = 243/352 (69%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL++R+ ++E ++S+   +       K T+ +A ++ I++    Y +     +D  
Sbjct: 6   DKLQDLEDRYLDLEAKISDPEVIARQEEWLKYTKAHAKLTEIVTVYREYKKLVDTWKDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E+  +A+ E+  ++  +   E ++  LLLP+D +D+K+ I+EIRAG GG 
Sbjct: 66  AIVK-AREDQELTAMAEEEMQELQPRLEAYEEKLTLLLLPRDPNDEKNIIMEIRAGAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA  + WKVE++ SS    GG+KE+V  +SG  V+S MKFESGVH
Sbjct: 125 EAALFAGDLFRMYTRYAEQKGWKVELMDSSPTGLGGFKEVVFMVSGTDVYSHMKFESGVH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTS  TVAV+PEA E+D+++   DIR+DT RA G+GGQ+VN T+SA
Sbjct: 185 RVQRVPDTESQGRVHTSTVTVAVMPEAQEVDIELNPADIRVDTYRAGGAGGQYVNKTESA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+     EKSQ +NR + ++VLR+R+ + E+++     +A RK Q+G+GDR
Sbjct: 245 VRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRILEAEQEKQRAATAAERKSQVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYN+ QGR+TDHRI LTL+KL  ++ G +D++++ L+ A QAK +  
Sbjct: 305 SERIRTYNYPQGRVTDHRIGLTLHKLPDIINGDLDELLDALMMAEQAKKLQQ 356


>gi|288574777|ref|ZP_06393134.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570518|gb|EFC92075.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 358

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 178/359 (49%), Positives = 247/359 (68%), Gaps = 6/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEE 59
                ++ ++     EIE +M++        +L    +++A +S I+     Y + + E 
Sbjct: 1   MKLDDKLQEIAATHEEIEHKMADPSVTSNPKELQSLGKKHAELSEIVEAYEEYKRIRSEL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++   ++   + D E+  LA+ EV ++E  + E E ++  LLLPKD +DDKS ++EIRAG
Sbjct: 61  EEAKALL--DSDDPEMAQLAKEEVHSLEPLLEEQEKKVTLLLLPKDPNDDKSVMVEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  DLFRMY R+A  R+W VE+L +++ + GGYKEIV  + G+G +S +K+E
Sbjct: 119 TGGDEAALFASDLFRMYSRFAEQRRWSVEILDANETEIGGYKEIVFKVDGQGAYSDLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVPATE+ GR+HTSAATVAVLPEA E DV++  ED++IDT R+SG+GGQHVN 
Sbjct: 179 SGVHRVQRVPATESGGRIHTSAATVAVLPEAEEFDVEVRQEDLKIDTYRSSGAGGQHVNM 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V    E+SQ +NR RAM  LR +LYD+E+++  +  +  RK QIG
Sbjct: 239 TDSAVRITHLPTGIVVTCQDERSQIKNRARAMAFLRTKLYDMEQRKRQDAEAQERKGQIG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF Q RITDHRI LTLYKL+  + G I +++  L  A QA+ +    +
Sbjct: 299 SGDRSERIRTYNFPQNRITDHRIGLTLYKLDAAMGGSITELVEALRMAEQAERMKDLDD 357


>gi|222053788|ref|YP_002536150.1| peptide chain release factor 1 [Geobacter sp. FRC-32]
 gi|221563077|gb|ACM19049.1| peptide chain release factor 1 [Geobacter sp. FRC-32]
          Length = 356

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 255/355 (71%), Gaps = 8/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +I +L+ R+ E+E  +S+     +   + KL+ E+  +S ++     Y +   E +   
Sbjct: 4   DKIEELERRYQELEALLSDPVVLGNQPEFRKLSREHFDLSALVQAYRNYKRIISEIEGNR 63

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E++++A+ E+ ++EK+   LE+EI  LLLPKD +DDKS ILEIRAGTGG 
Sbjct: 64  ELLA----DPEMKEMAEAELESLEKQRDALESEIKLLLLPKDPNDDKSVILEIRAGTGGD 119

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY R+A   +W+VEV+SSS+++ GG+KE+VA++ G GVF+++K+ESG H
Sbjct: 120 EAALFAGDLFRMYSRFAETNRWRVEVISSSESEKGGFKEVVASVEGEGVFAKLKYESGTH 179

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSA TVA++PEA ++D+DI   D++ID  R+SG+GGQHVNTTDSA
Sbjct: 180 RVQRVPETEAQGRIHTSACTVAIMPEAEDVDIDINPTDLKIDVYRSSGAGGQHVNTTDSA 239

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG +V    E+SQ +NR +AMKVL+ R+ D   +    + +A+RK Q+GSGDR
Sbjct: 240 VRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDNILQEQNAKLAADRKQQVGSGDR 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLY+L+ ++ G I +I + L   +Q + + + SE
Sbjct: 300 SERIRTYNFPQGRMTDHRIGLTLYRLDAIMAGDIAEIADALRAHYQMEALQAQSE 354


>gi|261343909|ref|ZP_05971554.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
 gi|282568295|gb|EFB73830.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
          Length = 360

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ EI+  ++++  +   D +  L++EYA ++ + +  + +   +++ +    
Sbjct: 8   KLEALQERYEEIQAHLADAGVIADQDRFRALSKEYAQLTDVANCFTAWQAVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++AQ E+   ++   ELE ++  LLLPKD DD+ +C +EIRAG GG E
Sbjct: 68  LL----DDPEMKEMAQEELKDAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA   +W+VE++S+SD + GGYKE++A ISG  V+ R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA T+AVLPE  E +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTIAVLPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMAKRHEAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDTLIQPIINEYQADQLSALSE 358


>gi|212711979|ref|ZP_03320107.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
           30120]
 gi|212685501|gb|EEB45029.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
           30120]
          Length = 360

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 249/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ EIE  ++++  +   D +  L++EYA ++ +    + +   + + +    
Sbjct: 8   KLEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLTDVAKCFTAWRTVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++AQ E+   ++   ELE ++  LLLPKD DD+ +C +EIRAG GG E
Sbjct: 68  LL----DDPEMKEMAQEELKEAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA   +W+VE++S+SD + GGYKE++A ISG  V+ R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA T+A+LPE  E +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTIAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRHAAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDTLIQPIINEYQADQLSALSE 358


>gi|149377994|ref|ZP_01895719.1| peptide chain release factor 1 [Marinobacter algicola DG893]
 gi|149357703|gb|EDM46200.1| peptide chain release factor 1 [Marinobacter algicola DG893]
          Length = 361

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 251/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   +S+  ++   D +  L+ E+A I PI+     + + + 
Sbjct: 1   MKSSIQSRLEQLVDRFEEVSALLSDQGTIANQDKFRDLSREFAEIEPIVHCFQAWQKSRD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   +  D   D+++R +A+ E+   E++  EL+ E+  L+LPKD +D K+  LE+R
Sbjct: 61  DVKEATELARD--GDADMRAMAEEELGLAEQKGEELDEELQRLMLPKDPNDGKNVFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLF+MY RYA  ++W+VEV+S+S+ + GGYKE++A I+G  V+  +K
Sbjct: 119 AGTGGDEAAIFAGDLFKMYMRYAERQRWQVEVISASEGEHGGYKEVIARIAGSAVYGALK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PEA E +  +I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVMPEADETEAVEINKSDLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    E+SQH+NR +AM  L +RL + E +R     +A RK 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQEERSQHKNRAKAMSFLASRLQNEEIERQQKTMAATRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D +I PL   HQA ++ S 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVISGDLDAVIMPLQQEHQADLLASL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|323496829|ref|ZP_08101866.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
 gi|323318088|gb|EGA71062.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
          Length = 362

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q ++
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMANE--DDEEMREMAQEEIKEAKDAIERLSDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY ++A  + W+VEV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E +  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLTLY+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTLYRLNEVMEGDVSSLIDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|16080754|ref|NP_391582.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311662|ref|ZP_03593509.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315990|ref|ZP_03597795.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320901|ref|ZP_03602195.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325185|ref|ZP_03606479.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313251|ref|YP_004205538.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
 gi|1172909|sp|P45872|RF1_BACSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|853776|emb|CAA89884.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|2636226|emb|CAB15718.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291486285|dbj|BAI87360.1| peptide chain release factor 1 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019525|gb|ADV94511.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
          Length = 356

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 161/356 (45%), Positives = 235/356 (66%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ ++   +S+   V+   KL   ++E + I   +     Y    ++  D
Sbjct: 1   MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D+E+RD+ + E+  ++KE   L   +  LL+PKD +DDK+ I+EIR   G
Sbjct: 61  AKAML-EEKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+L+RMY RYA L+ WK EV+ ++    GGYKEI+  I+G G +S++K+E+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEANVTGTGGYKEIIFMITGSGAYSKLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVA LPEA E++VDI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +GSG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D+++  L+   QA  +  + 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASKLQQSE 355


>gi|254491165|ref|ZP_05104346.1| peptide chain release factor 1 [Methylophaga thiooxidans DMS010]
 gi|224463678|gb|EEF79946.1| peptide chain release factor 1 [Methylophaga thiooxydans DMS010]
          Length = 362

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 177/361 (49%), Positives = 248/361 (68%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  EI   +++       + +  L++EYA + P++S  + Y     
Sbjct: 1   MKESIKNKLESLVDRHEEIAGLLADPDTMADQNKFRTLSQEYAQLEPVVSNFTAYRHTLS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +D + ++     D+E+R++A+ E+   E+   ELE  +  LLLPKD +D ++  LEIR
Sbjct: 61  AIEDANLML--EEDDAEMREMAREELNQAEQTQEELELSLQKLLLPKDPNDQRNIFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA +R+WKVEV+++ + + GGYKE++  I G G +SR+K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSKYAEVRRWKVEVINAQEGEHGGYKEMICRIVGEGAYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA+LPE  EID  DI   DIR+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAILPEVDEIDAVDINPADIRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR +AM VL++R+   + ++   E++  RK 
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRAKAMSVLQSRIMAEQVQKQEAEQAETRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGRITDHRINLTLYKL  +++G +D +I PL+  +QA  +   
Sbjct: 299 LVGSGDRSERIRTYNYPQGRITDHRINLTLYKLNEIVEGDLDQVIEPLINEYQADQLALL 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|148266072|ref|YP_001232778.1| peptide chain release factor 1 [Geobacter uraniireducens Rf4]
 gi|189039974|sp|A5G8T7|RF1_GEOUR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146399572|gb|ABQ28205.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
           uraniireducens Rf4]
          Length = 355

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 177/355 (49%), Positives = 254/355 (71%), Gaps = 8/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           ++I +L+ R+ E+E  +++   +     + KL+ E++ +S ++     Y +   E     
Sbjct: 3   EKIEELERRYQELEALLADPAVLGNQPEFRKLSREHSDLSALVESYRNYKKVLVEITGNR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E++++A+ E+ A+E++   LE EI  LLLPKD +D+KS ILEIRAGTGG 
Sbjct: 63  ELLA----DPEMKEMAEAELEALEEQQAALEAEIKLLLLPKDPNDNKSVILEIRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA   +W+VEV+S+S+++ GG+KEIVA++ G GVF+++K+ESG H
Sbjct: 119 EAALFAGDLFRMYGRYAESNRWRVEVISASESEKGGFKEIVASVEGDGVFAKLKYESGTH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSA TVA++PEA ++D+DI   D++ID  R+SG+GGQHVNTTDSA
Sbjct: 179 RVQRVPETEAQGRIHTSACTVAIMPEAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSA 238

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG +V    E+SQ +NR +AMKVL+ R+ D   +  +   +A+RK Q+GSGDR
Sbjct: 239 VRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIMQEQSARLAADRKQQVGSGDR 298

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLY+L+ ++ G I +I + L   +Q + +   SE
Sbjct: 299 SERIRTYNFPQGRMTDHRIGLTLYRLDAIMAGDIGEITDSLRVYYQMEALKQQSE 353


>gi|114569197|ref|YP_755877.1| peptide chain release factor 1 [Maricaulis maris MCS10]
 gi|119361557|sp|Q0ARZ8|RF1_MARMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114339659|gb|ABI64939.1| bacterial peptide chain release factor 1 (bRF-1) [Maricaulis maris
           MCS10]
          Length = 357

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 178/354 (50%), Positives = 263/354 (74%), Gaps = 3/354 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
              ++  + +RF ++E R+  +   D  +KL++E+A + P+  K +     + E  +L  
Sbjct: 4   PEARLAQVIDRFDQVEARLGAAGDADEIVKLSKEHAELKPVAEKANALKSARAELAELAE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D+E+ ++A+ E  A+++ + ELE+ ++ +LLPKD DD  + ++EIRAGTGG E
Sbjct: 64  MM--EGDDAEMAEMAREEFYALKERLPELEHAMSLMLLPKDKDDSANAMIEIRAGTGGDE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F G+L+ MY+RYA L+ W  E++S+S+ + GGYKE+VA ISG GVF R+KFESGVHR
Sbjct: 122 AAIFAGNLYGMYQRYAQLQGWSWELVSASEGEHGGYKEVVAAISGNGVFGRLKFESGVHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSAATVA++P+  +ID+++ + D+R+DTMRASG+GGQHVN TDSAV
Sbjct: 182 VQRVPATESQGRIHTSAATVAIMPQPEDIDIELDMGDVRVDTMRASGAGGQHVNKTDSAV 241

Query: 245 RITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           R+THIPTG++V   EKSQHQNR RA ++L+A+LYD++R+    ER+A RK QIGSGDRSE
Sbjct: 242 RMTHIPTGLVVVCQEKSQHQNRARAQEILKAKLYDMQREAANAERAAERKGQIGSGDRSE 301

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           RIRTYN+ QGR++DHRINLTLYKL+ ++ G  +D+++  L+   QA  + +  +
Sbjct: 302 RIRTYNYPQGRVSDHRINLTLYKLDDIVAGDGLDEVVAALIAEDQAARLAALED 355


>gi|295111719|emb|CBL28469.1| bacterial peptide chain release factor 1 (bRF-1) [Synergistetes
           bacterium SGP1]
          Length = 357

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 170/359 (47%), Positives = 238/359 (66%), Gaps = 6/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEE 59
                ++  ++  F +IE RM +  +      L    ++ A + P++ K   Y       
Sbjct: 1   MNIEPKLQAIEKEFLDIEERMGDPATASDPRALQDLGKKRAQLEPVVEKYRAYRAAVASI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   ++     D EI +LA+ E+  +E +I   E E+  LLLPKD +D+KS I+EIRAG
Sbjct: 61  AEARDLLK--GGDPEIAELAREELSELEPQIENFEKELTILLLPKDPNDEKSVIVEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF  DL+RMY R+   ++WK+EV+ SS    GGYKE++  I   G +S MK+E
Sbjct: 119 VGGDEAALFAADLYRMYTRFCERQRWKIEVIDSSLIGLGGYKEVIFRIDSHGAYSMMKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TEASGR+HTS+ATVAV+PE  +I+++I  ED+++DT R+SG+GGQHVN 
Sbjct: 179 SGGHRVQRVPVTEASGRIHTSSATVAVMPEVEDIEIEIRPEDLKVDTYRSSGAGGQHVNM 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+     E+SQ +NR RAM  L+ARLY +E+++   E+++ R+  IG
Sbjct: 239 TDSAVRITHLPTGIVATCQDERSQIKNRARAMAYLKARLYALEQEKQNAEQASERRGMIG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF Q RITDHRINLTLYKL+  L G + ++I+ ++ A Q + +    E
Sbjct: 299 SGDRSERIRTYNFPQNRITDHRINLTLYKLDNYLDGDLFEMIDAMILAEQTQKLEHLEE 357


>gi|229087819|ref|ZP_04219935.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
 gi|228695494|gb|EEL48363.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
          Length = 358

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVEDRYEKLNELLSDPEIISDSNKLREYSKEQSDIQDTVEVYREYKDVREQLRDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+RD+ + EV  +E + +EL   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AML-EEKLDAEMRDMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|188590258|ref|YP_001919883.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
           Alaska E43]
 gi|238689644|sp|B2UZI5|RF1_CLOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188500539|gb|ACD53675.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 360

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 170/357 (47%), Positives = 250/357 (70%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N++ E+ +++S+   +   + + KL +E A +  I++    Y Q  ++ Q
Sbjct: 1   MLLDKLAFIENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQ 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++ D  SD E++++   E+ ++ +   ELE EI  LLLPKD +DDK+  +EIR G 
Sbjct: 61  VNKEMLSDE-SDREMKEMLNEEISSLAEREIELEKEIQILLLPKDPNDDKNVFVEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMY RYA  ++W  E++S ++ D GG+KE+V  I G G +S++K+ES
Sbjct: 120 GGDEAALFAYNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTS  TVAVLPE  +++++I  +D+RID  RASG GGQ VNTT
Sbjct: 180 GVHRVQRVPDTESSGRIHTSTVTVAVLPEVDDVEIEIADKDVRIDVFRASGHGGQCVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+G++V    EKSQ +N+ +AMKVLR+RL++   +  A+  +A+RK Q+G+
Sbjct: 240 DSAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERADGIAADRKSQVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGRITDHRI LTLYKL+  L G + ++IN L+TA QA+ +    
Sbjct: 300 GDRSERIRTYNYPQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQAEKMQKMG 356


>gi|114319440|ref|YP_741123.1| peptide chain release factor 1 [Alkalilimnicola ehrlichii MLHE-1]
 gi|119361505|sp|Q0AC04|RF1_ALHEH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114225834|gb|ABI55633.1| bacterial peptide chain release factor 1 (bRF-1) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 361

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 173/361 (47%), Positives = 244/361 (67%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  EI   ++E         +  L+ EYA + P+I++++ Y + +Q
Sbjct: 1   MKASIRNKLERLRERHEEISALLAEPDTASDQKRFAALSREYAQLEPVIAELNHYQETEQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  +  D   D EIR++A+ E+   +  +  LE E+  LLLP D +D ++  LEIR
Sbjct: 61  ALASAREMARD--DDLEIREMAEEEISQAQARLEALEAELQVLLLPPDPNDGRNLYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA    W++E +S+S+ + GGYKE++  ISG G +SR+K
Sbjct: 119 AGTGGDEAALFAGDLLRMYARYAERHGWRLEEISASEGEQGGYKEVITRISGEGAWSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE   ++       ++R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDAVEDITINPAELRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V   SE+SQH+NR +A+ +L+ARL + ++   + +++  R+ 
Sbjct: 239 VNKTDSAIRITHLPTGVVVECQSERSQHKNRAQALALLQARLKNAQQAEQSAQQTEQRRQ 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGRITDHRINLTLY+LE +LQG +D ++ PL T HQA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRITDHRINLTLYRLEEILQGDLDQLVEPLRTEHQADQLAAL 358

Query: 356 S 356
           +
Sbjct: 359 A 359


>gi|75762680|ref|ZP_00742519.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74489826|gb|EAO53203.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 358

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 241/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + I   +     Y   +++ +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+RD+ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AML-EEKLDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+  F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKRAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRXHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRMEAAE 358


>gi|332663960|ref|YP_004446748.1| peptide chain release factor 1 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332774|gb|AEE49875.1| Peptide chain release factor 1 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 358

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 154/357 (43%), Positives = 233/357 (65%), Gaps = 6/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  + +R+  +E +MS+      +D Y K+++ Y  + PI+    IY         
Sbjct: 1   MLEKLEAIYDRYLNLEEQMSDPDIIVDMDRYKKVSKNYKDLKPIVEAFLIYRNLVGNRDS 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               + D   D E+R++AQ E+ ++  +I ELE++I +LL+PKD +D +  I EIR+GTG
Sbjct: 61  AKQALSDE--DPEMREMAQEELESLNPQIEELEDKIKFLLIPKDPEDSRDVIFEIRSGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF GDL+RMY RY   + WKV  +  ++   GGY ++V  I+G  V+  +KFESG
Sbjct: 119 GDEASLFAGDLYRMYTRYFESKGWKVSAMEINEGSVGGYNKLVLEINGEDVYGTLKFESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GRVHTSAATV V+P+    D++I  ED++ DT R+SG+GGQHVN T+
Sbjct: 179 AHRVQRVPKTESQGRVHTSAATVVVMPKLEMEDLEIRKEDLKTDTFRSSGAGGQHVNKTE 238

Query: 242 SAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           S VR TH+PTG++  ++  +SQ QNR  A++ L  ++Y++ R+   +E++A RK  +GSG
Sbjct: 239 SGVRFTHLPTGVVSESTDGRSQIQNREIALQRLYQKIYEMRRQAHESEQAAKRKSLVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS++IRTYNF Q R+TDHRINLT+Y L+ VL+G ++ II  L      + + +  E
Sbjct: 299 DRSDKIRTYNFPQNRVTDHRINLTIYSLDKVLEGDLEAIIEGLQLYENTEKLKAGEE 355


>gi|34539945|ref|NP_904424.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
 gi|46576709|sp|Q7MXT5|RF1_PORGI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34396256|gb|AAQ65323.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
          Length = 361

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 227/354 (64%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L++RF EI   +++   +     + KL++EY  +  I +    Y       ++  
Sbjct: 8   DRLDGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEEAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +    SD E+R++A+  +    + +  LE EI  LL+P + +DDK+ I+EIR GTGG 
Sbjct: 68  HTMA-KESDEELREMAREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY +Y   + W+VEV   S+   GGYKEIV ++ G GV+  +K+ESGVH
Sbjct: 127 EAALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA E+DV+I   DI + T R+ G+GGQ+VN  ++ 
Sbjct: 187 RVQRVPATETQGRIHTSAATVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETK 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V++TH PTG++V     +SQ  NR  AM++LR++LYD+E  +     +A RK  + +GDR
Sbjct: 247 VQLTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEAIAARRKTMVSTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S +IRTYN+ QGR+TDHRIN+T+Y L  V+ G +   I+ L+ A   + +  A+
Sbjct: 307 SAKIRTYNYPQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAENVERMKEAA 360


>gi|312131222|ref|YP_003998562.1| bacterial peptide chain release factor 1 (brf-1) [Leadbetterella
           byssophila DSM 17132]
 gi|311907768|gb|ADQ18209.1| bacterial peptide chain release factor 1 (bRF-1) [Leadbetterella
           byssophila DSM 17132]
          Length = 358

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/355 (45%), Positives = 234/355 (65%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +Q+  +  RF E+  +++    V     + K+++EY  +  I+ + + Y        
Sbjct: 1   MLIEQLEGIVERFDEVSQQITMPEVVSDMEKFKKISKEYRDLEKIVQEYNAYKLILAHLD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++     D E+R++A++E+  +  +  E E  +  LL+PKD +D K  ILEIRAGT
Sbjct: 61  EAKEILA-TEKDEEMREMAKLELDELSPKKEEAEERLKELLIPKDPNDSKDSILEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA++F GDLFRMY+R+AA + W+  V+  +D   GGYKEIV ++ G  V+ ++K+ES
Sbjct: 120 GGDEASIFAGDLFRMYQRFAAQQGWQFTVMDFTDAPSGGYKEIVVSVKGEDVYGKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE+ GR+HTSAATVAVLPEA E+DV I + DIR DT  +SG+GGQ VNTT
Sbjct: 180 GVHRVQRVPATESQGRIHTSAATVAVLPEADEVDVQINMNDIRKDTFCSSGAGGQSVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
            SAVR+THIPTG++V    E+SQ +N  +A+ VLR+RLY++E  +     +  RK  +GS
Sbjct: 240 YSAVRVTHIPTGLVVQCQDERSQIKNFDKALTVLRSRLYEIELAKQNESIAGERKSLVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRS++IRTYN+ QGR+TDHRI  T+Y L +V++G I + I  L  A   + +  
Sbjct: 300 GDRSDKIRTYNYPQGRVTDHRIGFTVYNLPHVMEGNIGEFIEKLRLAENTEKMKE 354


>gi|308050535|ref|YP_003914101.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
           balearica DSM 9799]
 gi|307632725|gb|ADN77027.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
           balearica DSM 9799]
          Length = 360

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 164/355 (46%), Positives = 242/355 (68%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ E++  + E   +   D + +L++EY+ +  +++    Y Q +++      
Sbjct: 8   KLEGLQERYEEVQALLGEPDVIADQDRFRQLSKEYSQLEAVVNAFLAYQQNQEDIATATE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++A+ E+     +   LE E+  LLLPKD +DD+S  +EIRAG GG E
Sbjct: 68  MLA----DPEMKEMAEEELAEARAQTEALEQELQILLLPKDPNDDRSAFVEIRAGAGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDL RMY RYA  + W VE++S+SD + GGYKE++A  SG  V+  +KFESG HR
Sbjct: 124 AAIFAGDLLRMYSRYAEQKGWSVELMSASDGEHGGYKEVIAKFSGDSVYGELKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TV V+PE  E + ++I   D+++DT RASG+GGQHVN TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVVVMPEVPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG +V    E+SQH+NR +AM VL ARL   E ++   E ++ R+  + SGDR
Sbjct: 244 VRITHLPTGTVVECQDERSQHKNRAKAMAVLSARLQAAEDEKRKAEETSTRRSLVASGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR++DHRINLTLY+L  V++G +  ++ P+L  HQA ++ + +E
Sbjct: 304 SERIRTYNYPQGRVSDHRINLTLYRLTEVMEGELSALMQPILQEHQADLLAALAE 358


>gi|118443694|ref|YP_879014.1| peptide chain release factor 1 [Clostridium novyi NT]
 gi|166223551|sp|A0Q312|RF1_CLONN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118134150|gb|ABK61194.1| peptide chain release factor 1 [Clostridium novyi NT]
          Length = 357

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 250/356 (70%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++   +N++ E+ +++S+   +   + + KL +E+A +  I++K   Y   K+E + 
Sbjct: 1   MLDKLEFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKTNKEELEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D +++++ Q E+  +E+ I + + E+  LLLPKD +DDK+  +EIRAG G
Sbjct: 61  NKEMLSEE-TDKDMKEMIQEEIKTLEESIVKDQEELKILLLPKDPNDDKNVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA    WK E++S+++ D GG+KE+V  + G   +S+MKFESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDCAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++D+ I   DIR+D  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V    EKSQ +N+ +AMKVL+ARLY+      +   SA+RK Q+G+G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAERSASISADRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+T+HRI LTLYKLE  L G ++++I+ L+TA QA+ + +  
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQAEKMKAMG 355


>gi|251778025|ref|ZP_04820945.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243082340|gb|EES48230.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 360

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 170/357 (47%), Positives = 250/357 (70%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N++ E+ +++S+   +   + + KL +E A +  I++    Y Q  ++ Q
Sbjct: 1   MLLDKLAFIENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQ 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++ D  SD E++++   E+ ++ +   ELE EI  LLLPKD +DDK+  +EIR G 
Sbjct: 61  VNKEMLSDE-SDREMKEMLNEEISSLSEREIELEKEIQILLLPKDPNDDKNVFVEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMY RYA  ++W  E++S ++ D GG+KE+V  I G G +S++K+ES
Sbjct: 120 GGDEAALFAYNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTS  TVAVLPE  +++++I  +D+RID  RASG GGQ VNTT
Sbjct: 180 GVHRVQRVPDTESSGRIHTSTVTVAVLPEVDDVEIEIADKDVRIDVFRASGHGGQCVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+G++V    EKSQ +N+ +AMKVLR+RL++   +  A+  +A+RK Q+G+
Sbjct: 240 DSAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERADGIAADRKSQVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGRITDHRI LTLYKL+  L G + ++IN L+TA QA+ +    
Sbjct: 300 GDRSERIRTYNYPQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQAEKMQKMG 356


>gi|162138527|ref|YP_483698.2| peptide chain release factor 1 [Rhodopseudomonas palustris HaA2]
 gi|119361590|sp|Q2J423|RF1_RHOP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 361

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 182/358 (50%), Positives = 257/358 (71%), Gaps = 2/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E ++    + + Y+++T E + ++P++  +  Y + + E  
Sbjct: 1   MSNLPEAKLDVLLAHHASLEAQLLGEVAANDYVRITRELSELNPLVEAVKAYREVRDELG 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  ++ D  +D E+R +A+ E  A++    +L  +I   LLPKD  D+++ +LEIRAGT
Sbjct: 61  DIDDLLEDPATDPEMRAMAEAERDALDAHREDLIQQIRVALLPKDAMDERNVMLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYE++AAL+ W VEV+S+S+   GG+KEI+A + GRG F+++KFES
Sbjct: 121 GGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  E+DVDI  +D++IDTMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKPDDLKIDTMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITH+PTGI+V     +SQH+NR  AM +LR+R+YD E++R+ + RSA RK ++GS
Sbjct: 241 ESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRIDSARSAERKQKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQ   + +  
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQVAQLAAQG 358


>gi|59711375|ref|YP_204151.1| peptide chain release factor 1 [Vibrio fischeri ES114]
 gi|197334513|ref|YP_002155529.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
 gi|75431754|sp|Q5E6T3|RF1_VIBF1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690273|sp|B5FBX0|RF1_VIBFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59479476|gb|AAW85263.1| peptide chain release factor RF-1 [Vibrio fischeri ES114]
 gi|197316003|gb|ACH65450.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
          Length = 362

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 241/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L+ EY+ +  +      Y+Q ++
Sbjct: 1   MKASIRVKLETLVERYEEVQHLLGDPDVIGDQNKFRALSREYSQLEEVTQCFQAYEQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +D+++C LEIR
Sbjct: 61  DLVAAQEMAQE--DDEEMREMAQEEIKDAKEAIERLTDELQVLLLPKDPNDERNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F G+LFRMY R+A  + W+VEV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGNLFRMYSRFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGEGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  R A   S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEARRAAAVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I P++  +QA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLNEVMEGDLGCLIEPVVLEYQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|331085530|ref|ZP_08334614.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407417|gb|EGG86919.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 358

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 176/354 (49%), Positives = 256/354 (72%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ EI   + E    +    + KL +E A ++PI+   + Y + KQ   D  
Sbjct: 3   DKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIADSE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+R+LA+ E+ + +K + ELE+E+  LLLPKD +DDK+ ++EIRAG GG 
Sbjct: 63  EML-EIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF  +++RMY  YA  ++WK E++S ++N  GG+KE+V  +SG+GV+SRMK+ESGVH
Sbjct: 122 ESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LY++E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF QGR+TDHRI LTL+KL+ +L G +D++I+ L+ A QA  +    
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQAIRLSGLE 355


>gi|322832986|ref|YP_004213013.1| peptide chain release factor 1 [Rahnella sp. Y9602]
 gi|321168187|gb|ADW73886.1| peptide chain release factor 1 [Rahnella sp. Y9602]
          Length = 360

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 249/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++  +   D +  L+ EY+ ++ +      + Q +++ +    
Sbjct: 8   KLEALQERHEEVQAMLGDAGVIADQDKFRSLSREYSQLTAVSECFLAWRQAQEDLETAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +  I ELE ++  LLLPKD DD++ C LEIRAGTGG E
Sbjct: 68  ML----DDPEMREMAQDEIKECKANIEELEEKLQVLLLPKDPDDERGCFLEIRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA +R+W+VE++S+S+ + GGYKE++A ISG G + + KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAEMRRWRVEIVSASEGEHGGYKEVIAKISGEGAYGQFKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKRQAEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLT+Y+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTIYRLDEVMEGKLDSLIQPIVQEYQADQLAALSE 358


>gi|317048556|ref|YP_004116204.1| peptide chain release factor 1 [Pantoea sp. At-9b]
 gi|316950173|gb|ADU69648.1| peptide chain release factor 1 [Pantoea sp. At-9b]
          Length = 360

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 165/361 (45%), Positives = 246/361 (68%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+E  + ++  +     +  L+ EYA +S +      + Q ++
Sbjct: 1   MKTSIVAKLEALQERHEEVEALLGDAGVIADQERFRALSREYAQLSDVTRCFREWQQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+    ++   LE ++  LLLPKD DD++ C +E+R
Sbjct: 61  DVETAEMLL----DDPEMREMAQEELKTSREKREVLEQQLQVLLLPKDPDDERPCFVEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R+W+VE++SS+D + GGYKE++A ++G G + R K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYSRYAEARRWQVEIISSNDGEHGGYKEVIARVTGDGAYGRFK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +  DI   D++IDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPGDLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRHEAEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYNF QGR+TDHRINLT+Y+L+  ++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRIRTYNFPQGRVTDHRINLTIYRLDETMEGKLDSLIEPIVQEYQADQLAAL 356

Query: 356 S 356
           +
Sbjct: 357 A 357


>gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [marine bacterium HP15]
          Length = 362

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 251/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   +S+S  +   D +  L+ E+A I PI+     +     
Sbjct: 1   MKPSIQSRLEQLSDRFEEVSALLSDSSIISQQDKFRDLSREFAEIEPIVHCFQAWQHSLD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  D   D+++R++A+ E+   E++  EL+ E+  L+LPKD +D K+  LEIR
Sbjct: 61  DIEAARELAKD--GDADMREMAEEELQLAEQKSEELDEELQRLMLPKDPNDGKNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R+W+VEVLS S+ + GG+KE++A ++G GV+  +K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARVAGDGVYGALK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PEA E + +++   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR +A+ +L +RL + E +R     +  RK 
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAETERQQKSMAETRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D ++ PL   HQA+++ S 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIAGDLDAVVVPLQQEHQAELLASL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|238919470|ref|YP_002932985.1| peptide chain release factor 1 [Edwardsiella ictaluri 93-146]
 gi|259585221|sp|C5B814|RF1_EDWI9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238869039|gb|ACR68750.1| peptide chain release factor 1, putative [Edwardsiella ictaluri
           93-146]
          Length = 360

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 247/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++  +   D +  L+ EYA ++ +      + Q + +      
Sbjct: 8   KLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLAWRQVQDDLTTAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+RD+AQ E+      + ELE ++  LLLPKD DD++ C LE+RAGTGG E
Sbjct: 68  LL----DDPEMRDMAQEELKEARGRLAELEQQLQILLLPKDPDDERDCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W++E++S+S+ + GGYKE++A +SG G + R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIARVSGDGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+P   E +   I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R+RTYNF QGR+TDHRINLTLY+L+ V++G +D++I P++  HQA  + + +E
Sbjct: 304 SDRVRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDNLIEPIVQEHQADQLSALAE 358


>gi|18311184|ref|NP_563118.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
 gi|110799590|ref|YP_696880.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
 gi|110802815|ref|YP_699476.1| peptide chain release factor 1 [Clostridium perfringens SM101]
 gi|168205561|ref|ZP_02631566.1| peptide chain release factor 1 [Clostridium perfringens E str.
           JGS1987]
 gi|168210131|ref|ZP_02635756.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
           3626]
 gi|168213694|ref|ZP_02639319.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
           F4969]
 gi|168215831|ref|ZP_02641456.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
 gi|169344167|ref|ZP_02865149.1| peptide chain release factor 1 [Clostridium perfringens C str.
           JGS1495]
 gi|182624062|ref|ZP_02951850.1| peptide chain release factor 1 [Clostridium perfringens D str.
           JGS1721]
 gi|20139327|sp|Q8XIB9|RF1_CLOPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361525|sp|Q0TNB0|RF1_CLOP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361526|sp|Q0SQY1|RF1_CLOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|18145867|dbj|BAB81908.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
 gi|110674237|gb|ABG83224.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
 gi|110683316|gb|ABG86686.1| peptide chain release factor 1 [Clostridium perfringens SM101]
 gi|169297625|gb|EDS79725.1| peptide chain release factor 1 [Clostridium perfringens C str.
           JGS1495]
 gi|170662868|gb|EDT15551.1| peptide chain release factor 1 [Clostridium perfringens E str.
           JGS1987]
 gi|170711762|gb|EDT23944.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
           3626]
 gi|170714864|gb|EDT27046.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
           F4969]
 gi|177910955|gb|EDT73309.1| peptide chain release factor 1 [Clostridium perfringens D str.
           JGS1721]
 gi|182382220|gb|EDT79699.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
          Length = 360

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 170/357 (47%), Positives = 254/357 (71%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N++ E+ +++S+   +     + KL +E+A +  I++K   Y +  +E +
Sbjct: 1   MILDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++ +  SD E+R++   E+  + +  +ELE+EI  LLLPKD +DDK+  +EIR G 
Sbjct: 61  ANKEMLSEE-SDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMY +YA   +WKVE++S+++ D GG+KE+V  I G G +S++K+ES
Sbjct: 120 GGDEAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+SGR+HTS ATVAVLPE  +++++I  +DI+ID  RASG+GGQ VNTT
Sbjct: 180 GAHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINDKDIKIDVFRASGNGGQCVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+G++V    EKSQ +N+ +AMKVLRARL++          + +RK Q+G+
Sbjct: 240 DSAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLFEQAEAERLAGIAEDRKSQVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRIN+TLYKL+  L+G ID+I+N L+T  QA+ + +  
Sbjct: 300 GDRSERIRTYNYPQGRVTDHRINMTLYKLDSFLEGDIDEILNALITEDQAQKMKAMG 356


>gi|229828875|ref|ZP_04454944.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
           14600]
 gi|229792038|gb|EEP28152.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
           14600]
          Length = 357

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 176/354 (49%), Positives = 240/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ EI  +++E         + +L +E + ++PI+     Y ++KQ  +D  
Sbjct: 3   DKLEDLVARYEEIMRQIAEPDIASDGAKFTELMKEQSELAPIVETFRAYQKQKQSIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+R LA+ E+        ELEN++  LLLPKD++DD++ I+EIR G GG 
Sbjct: 63  ELL-DAESDEEMRQLAKEELAEARASAEELENQLKVLLLPKDSNDDRNVIIEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R W  EV+   +   GG K+I   + GRG +S +K+ESGVH
Sbjct: 122 EAALFAAEVYRMYRHYAESRGWACEVMELEETGIGGMKKINFMVRGRGAYSTLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTS  TVAV+PEA E+DV I   DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPATESGGRIHTSTVTVAVMPEAQEVDVVIDPADIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LRA+LY +E  R   E SA R  QIGSGDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKNKAFALLRAKLYTMEMLRQQEEASARRLAQIGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF QGR+TDHRINLTLYKL+ +L G + ++++ L+ A QA  +    
Sbjct: 302 SEKIRTYNFPQGRVTDHRINLTLYKLDKILNGDLQELLDALMAADQAAKLAQQE 355


>gi|251789676|ref|YP_003004397.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
 gi|247538297|gb|ACT06918.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
          Length = 360

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E++  + E   +   D +  L+ EYA ++ I      + Q + 
Sbjct: 1   MKSSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQCWQQTQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+RDLAQ E+ A +     LE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DLATAELML----DDPEMRDLAQEELKAAKAASETLEQQLQVLLLPKDPDDERGCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA  R+WKVE++S+SD + GGYKE++A + G G + ++K
Sbjct: 117 AGTGGDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVVGDGAYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E ++   E ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRIRTYNFPQGRVTDHRINLTLYRLDEAIEGKLDMLIQPIVQEYQADQLAAL 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|291543206|emb|CBL16315.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
           18P13]
          Length = 361

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 164/351 (46%), Positives = 245/351 (69%), Gaps = 4/351 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ +F EI  R+S+      +  Y +L +EY  + PI+ K   Y +  Q  Q+  
Sbjct: 3   EKLQIMEQKFEEISQRLSDPAVTTDIAVYTQLMKEYKNLEPIVQKYRAYKRSAQSMQEAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++   + D E+R++AQ E    ++++ E   ++  LLLPKD +DD++ I+EIR G GG 
Sbjct: 63  ELLDAGSEDPELREMAQAEFETEKEQLAEYAEQLKILLLPKDPNDDRNVIIEIRGGAGGE 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L+RMY  YA  R WK EVLS++  + GG+KEI  +I+G G +SR+K+ESGVH
Sbjct: 123 EAALFANSLYRMYTMYAESRGWKQEVLSANPTELGGFKEISFSITGEGAYSRLKYESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAVL EA E+++ I   D++ID  R+SG+GGQH+N T+SA
Sbjct: 183 RVQRVPETESQGRIHTSTVTVAVLVEADEVELAINPTDLKIDVFRSSGAGGQHINKTESA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG++V    E+SQ +N+ RAM +LR+RLY+  ++   ++ ++ R++Q+G+GDR
Sbjct: 243 VRITHLPTGLVVECQDERSQFKNKDRAMMILRSRLYERMQQEQQDKIASQRRMQVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           SERIRTYNF QGR+TDHRI LT+Y+LE V+ G +D++++ L TA QA  + 
Sbjct: 303 SERIRTYNFPQGRLTDHRIGLTIYRLEDVMNGNLDEVLDALATADQAAKLA 353


>gi|120555272|ref|YP_959623.1| peptide chain release factor 1 [Marinobacter aquaeolei VT8]
 gi|166223568|sp|A1U367|RF1_MARAV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120325121|gb|ABM19436.1| bacterial peptide chain release factor 1 (bRF-1) [Marinobacter
           aquaeolei VT8]
          Length = 363

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 173/361 (47%), Positives = 246/361 (68%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  RF E+   +S++  +   D +  L+ E+A I P++     + Q  +
Sbjct: 1   MKPSIQSRLEQLVERFEEVNALLSDASVIANQDKFRDLSREFAEIEPVVKCFQAWRQSLE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  D   D+++R++A+ E+ +      EL+ E+  L+LPKD +D K+  LEIR
Sbjct: 61  DIDAATELAKD--GDADMREMAEEELASARARSEELDEELQRLMLPKDPNDTKNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R+W+VEVLS ++ + GG+KEI+A +SG GV+  +K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARLSGDGVYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PEA E +  +I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR +A+ +L +RL + E ++     +  RK 
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQQKSMAETRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D ++ PL   HQA+++   
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIAGDLDAVVVPLQQEHQAELLADM 358

Query: 356 S 356
           +
Sbjct: 359 A 359


>gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
 gi|153796765|gb|EDN79185.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
          Length = 356

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 254/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   + E    +    + KL +E + ++PI+   + Y Q KQ  +D  
Sbjct: 3   DKLEDLLIRYEEVMGELQEPGVANDPERFRKLMKEQSDLAPIVEAYNEYKQCKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R+LA+ E+   +  + ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  MMLEEESD-EEMRELAKEELNESKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R+W+ E++S ++N  GG+KE V  I+G+G +SRMK+ESGVH
Sbjct: 122 EAALFAAEVYRMYLHYAESRRWRTEMISLNENGIGGFKECVFMITGQGAYSRMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA ++DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEDVDVVIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LY++E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL+KL+ +L G +D++I+ L+ A Q+  + + +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDTILNGDLDEVIDSLIAADQSAKLANMNE 356


>gi|88810851|ref|ZP_01126108.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
 gi|88792481|gb|EAR23591.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
          Length = 362

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 256/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M  L  +++  L  R+ EIE  +++   +     +  L++EYA + P++  +S Y + +Q
Sbjct: 1   MKGLLRQRLEQLGERYEEIEALLADPTVIGEQKQFTALSQEYARLHPVVQALSKYQEMEQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  +  D   D EIR LA+ E+ A + ++ EL  ++ +L+LP+D DD+K   LEIR
Sbjct: 61  VLTSTRALSEDP--DPEIRALAKDEIRAAQLQLEELGQQLQWLMLPQDPDDEKGIFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA  R+W++E+++ +  + GGYKEI++ + G GV+SR+K
Sbjct: 119 AGTGGDEAALFAGDLFRMYARYAERRRWRLEIINEAPGEHGGYKEIISRVEGAGVYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  +I+       ++R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPTTESQGRIHTSACTVAVLPEPEQIEEIETATAELRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM +L+A+L   ER+R   E+SA R+ 
Sbjct: 239 VNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMGLLQAKLTARERERQQQEQSATRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF Q R+T+HR+ LTLYKL+ +L+G +D II+PL+++H+A  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQSRVTEHRVGLTLYKLDEILEGDLDPIIDPLISSHRADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|254238595|ref|ZP_04931918.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
 gi|126170526|gb|EAZ56037.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
          Length = 360

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 240/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L +R+ E+   + ++  +     +   + EYA + P+I     Y + + 
Sbjct: 1   MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD E+RDLA+ EV      +  L + +  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGT G EAA+F GDLFRMY RYA  + W+VE LS ++ + GGYKE++A + G  V++++K
Sbjct: 119 AGTCGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITHIP+GI+V    E+SQH+NR +AM  L A+L D ++       ++ RKL
Sbjct: 239 VNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY L  V++G ++ +I PLL  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLLQEYQADQLAAL 358

Query: 356 SE 357
            +
Sbjct: 359 GD 360


>gi|166032746|ref|ZP_02235575.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
           27755]
 gi|166027103|gb|EDR45860.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
           27755]
          Length = 376

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 243/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R  EI   + E       + + KL +E + ++PI+     Y   KQ  ++  
Sbjct: 23  DKLEDLLIRLEEILSELQEPDVASDPNRFRKLMKEQSELTPIVEAYKEYKACKQNIEE-S 81

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +  SD ++R+LA+ E+   +  + ELE+E+  LLLPKD +DDK+ ++EIRAG GG 
Sbjct: 82  LELLNEESDEDMRELAKEELNESKARVEELEHELKILLLPKDPNDDKNVVVEIRAGAGGD 141

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  ++WKVE++   +   GG K +   I G+G +S MK+ESGVH
Sbjct: 142 EAALFAAEIYRMYLHYAESKRWKVELVECEEIGIGGMKNVTFMIDGQGAYSMMKYESGVH 201

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA ++DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 202 RVQRVPETESGGRIHTSTITVAVMPEAEDVDVHIDEKDIRIDVMRASGNGGQCVNTTDSA 261

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LRA+LYD+E ++  +  +  RK QIG+GDR
Sbjct: 262 VRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDLECQKQHDAEAEARKSQIGTGDR 321

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYKL+ ++ G I +II+  + A QAK + +  E
Sbjct: 322 SEKIRTYNFPQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQAKKLANMDE 376


>gi|298292694|ref|YP_003694633.1| peptide chain release factor 1 [Starkeya novella DSM 506]
 gi|296929205|gb|ADH90014.1| peptide chain release factor 1 [Starkeya novella DSM 506]
          Length = 365

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 181/350 (51%), Positives = 250/350 (71%), Gaps = 2/350 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L  R AEIE  +S +P  + Y++L+ E+A +SP+   +      +++  
Sbjct: 1   MTALPDARLDQLLARHAEIEHALSANPDAETYVRLSREFAELSPLTDSVKALRSAERQLT 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T+  +   D E+  LA+ EV ++E+++  L + +   LLPKD  D++  ILE+RAGT
Sbjct: 61  DARTLAAEAAGDKEMAALAEEEVASLEEQVETLTHAVRLALLPKDAMDERGVILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMYER+A L  W VEVLS ++   GG+KEIVA + G G ++++KFES
Sbjct: 121 GGDEAALFAGDLFRMYERFAGLNGWSVEVLSLTEGTAGGFKEIVAALHGSGAYAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE SGR+HTSAATVAVLPE  ++D+ I   D+RID  RASG+GGQHVN T
Sbjct: 181 GVHRVQRVPETEGSGRIHTSAATVAVLPEVEDVDIAINESDLRIDVFRASGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITH+PTG +V    E+SQH+N+ RAM +LRAR+Y+ ER++  + R++ RK+Q+GS
Sbjct: 241 ESAVRITHLPTGTVVAVQDERSQHKNKARAMGMLRARIYEAEREKRDSARASERKVQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQ 348
           GDRSERIRTYNF QGR+TDHRI LTL+KL  +L G  + ++++ L T +Q
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRIGLTLHKLPEILSGEGLGELVDALTTEYQ 350


>gi|323492377|ref|ZP_08097530.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
 gi|323313424|gb|EGA66535.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
          Length = 362

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q ++
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMANE--DDEEMREMAQEEIKEAKEAIERLSDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY ++A  + W+VEV+SS++++ GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E +  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDVASLIDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|51246578|ref|YP_066462.1| peptide chain release factor 1 [Desulfotalea psychrophila LSv54]
 gi|61214607|sp|Q6AJM5|RF1_DESPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50877615|emb|CAG37455.1| probable peptide chain release factor 1 (RF-1) [Desulfotalea
           psychrophila LSv54]
          Length = 357

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 177/354 (50%), Positives = 244/354 (68%), Gaps = 4/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +  DL NR   +E ++S+   V+    + K+  E+A +S + +    Y    Q+ +D  
Sbjct: 4   DKFDDLDNRIEHLEGKLSDPEIVNDQKEFQKVVREHAHLSKLNTVYKEYKTACQDVEDNK 63

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D ++++LA+ E+  +   I EL+  I  +LLPKD +D+K+  LEIRAG GG 
Sbjct: 64  AILHDDGEDPDLKELAKAELEELNVRIVELDKAIKIILLPKDPNDEKNTFLEIRAGAGGD 123

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFV DLFRMY R+A    WKVEV+SS+    GG+KEI+A ISG  VFS++K+ESGVH
Sbjct: 124 EAALFVADLFRMYTRFAETMGWKVEVMSSNPLGIGGFKEIIALISGEQVFSKLKYESGVH 183

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTSA TVA+LPEA E+++ I + +++ D  R+SG GGQ VNTTDSA
Sbjct: 184 RVQRVPETETQGRIHTSAVTVAILPEAEEVELHIDMNELKFDVFRSSGPGGQSVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG++V    EKSQH+N+++A+ VLRARL D        + S  R+ Q+G+GDR
Sbjct: 244 VRITHLPTGLVVICQDEKSQHKNKVKALTVLRARLLDKLESEHNAKISEARRSQVGTGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHRINLTLYKLE ++ G +D++I PL+T  QA+ +    
Sbjct: 304 SERIRTYNFPQGRVTDHRINLTLYKLETIMGGSLDEVIYPLITHDQAEKLKDLE 357


>gi|229020548|ref|ZP_04177293.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
 gi|229026769|ref|ZP_04183101.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
 gi|228734492|gb|EEL85154.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
 gi|228740768|gb|EEL91021.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
          Length = 358

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ ++   +S+   +    KL   ++E + +   +     Y   +++ +D  
Sbjct: 6   DRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+E+R++ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDAEMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++++I  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEINIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|297180848|gb|ADI17053.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_30A23]
          Length = 358

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 188/353 (53%), Positives = 250/353 (70%), Gaps = 4/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           ++  +  R  EI+  +++ P      Y KLT EYA ++PI+ ++  + +  Q+ +D   +
Sbjct: 7   KLETVVRRHEEIQALLADHPEPGSADYTKLTREYAEMNPIVEEMRAFQKSVQDLEDARAL 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D+++R +A+ E   ++ EI   E  +  LLLP+D  D ++ ILEIR GTGG EA
Sbjct: 67  AA-SEDDADMRAMAEDEARELQAEIDATEQRMKVLLLPRDEADSRNAILEIRPGTGGDEA 125

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            LF GDL  MY RYA L+ WK E+L  S+ND GG KE+ A I+G  VF+ +KFESGVHRV
Sbjct: 126 GLFAGDLLAMYRRYAELQGWKFEILEMSENDVGGLKEVSAKINGTNVFAALKFESGVHRV 185

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE+ GR+HTSAATVAVLPEA ++D++I  EDIRIDTMRASG+GGQHVNTTDSAVR
Sbjct: 186 QRVPMTESGGRIHTSAATVAVLPEAEDVDIEIKAEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 246 ITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           ITH+PTGI+VT S+KSQH+NR  AM+VLRARLY+  R+    ER+ANRK Q+GSGDRSER
Sbjct: 246 ITHLPTGIIVTQSQKSQHRNREEAMRVLRARLYEKAREEANAERAANRKGQVGSGDRSER 305

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           IRTYN+ QGR++DHRINLTL+KL+ ++ G  + ++I  L    QA  +    E
Sbjct: 306 IRTYNYPQGRVSDHRINLTLHKLDRIVAGDGLGEVIEALTAEDQAARLAELGE 358


>gi|329888688|ref|ZP_08267286.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
 gi|328847244|gb|EGF96806.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
          Length = 345

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 185/345 (53%), Positives = 247/345 (71%), Gaps = 4/345 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           + +RF ++E RM  +      ++L++E+A + P+   +    + + E  DL  +      
Sbjct: 1   MLDRFHQVEARMGAATDGAEIVRLSKEHAELKPVADAVQALARARAEADDLKAMAA---- 56

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D E+  LA  E+ A+ + +  LE E+  LL P+D D++ S +LE+RAGTGG EAALF GD
Sbjct: 57  DPEMAALASDELDALTERLPTLEREVALLLAPRDADENASAVLEVRAGTGGDEAALFAGD 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY RYA  R W+VE+ S+++ D GG+KEI+AT+SG GVF R+KFESGVHRVQRVP T
Sbjct: 117 LFRMYSRYAQSRGWRVEIDSAAEGDAGGFKEIIATVSGEGVFGRLKFESGVHRVQRVPTT 176

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           EA GR+HTSAAT+AVLPE  +++++I  +DIRIDT R+SG+GGQHVN TDSAVRITH+PT
Sbjct: 177 EAGGRIHTSAATIAVLPEVEDVEIEILDKDIRIDTYRSSGAGGQHVNKTDSAVRITHLPT 236

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+ TSSEKSQH NR +AMK LR RLYD++R+     RS  RK Q+GSGDRSERIRTYNF
Sbjct: 237 GIVATSSEKSQHVNRDKAMKNLRVRLYDMQRQAKDAARSDARKSQVGSGDRSERIRTYNF 296

Query: 312 SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            QGR+TDHRI LTL+ L  +L+G +D ++N L+   QA  +    
Sbjct: 297 PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIAEDQAARLADLE 341


>gi|78221601|ref|YP_383348.1| peptide chain release factor 1 [Geobacter metallireducens GS-15]
 gi|119361544|sp|Q39YQ1|RF1_GEOMG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78192856|gb|ABB30623.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
           metallireducens GS-15]
          Length = 355

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 255/355 (71%), Gaps = 8/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +I +L+ R+ E+E  ++    +     + KL+ E+  ++ ++     Y +   E +   
Sbjct: 3   DKIEELEIRYQELESLLAVPTVIANQPEFRKLSREHNDLTGLVEAYRRYKKVLAEIEGNR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E++++A+ E+  +E++  ELE EI  LLLPKD +DD++ ILEIRAGTGG 
Sbjct: 63  ELLA----DPEMKEMAEAELEDLERQQEELEGEIKLLLLPKDPNDDRNVILEIRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF GDLFRMY R+A   +WKVEV+S+S+++ GG+KE+VA I G+ VF+++K+ESG H
Sbjct: 119 ESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEVVALIEGQAVFAKLKYESGTH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSA TVAVLPEA +I++DI   D++ID  RASG+GGQHVN T+SA
Sbjct: 179 RVQRVPETEAQGRIHTSACTVAVLPEAEDIEIDINPVDLKIDVYRASGAGGQHVNKTESA 238

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    E+SQ +NR +AMKVL++R+ D  ++      +A+RK Q+GSGDR
Sbjct: 239 VRITHLPTGIVVECQDERSQIKNRSKAMKVLKSRILDGLQQEQNARIAADRKQQVGSGDR 298

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLY+L+ +++G I ++++ L   +Q + + + +E
Sbjct: 299 SERIRTYNFPQGRMTDHRIGLTLYRLDALMEGDIAEVVDSLRAHYQMEALKAQAE 353


>gi|311070220|ref|YP_003975143.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
 gi|310870737|gb|ADP34212.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
          Length = 356

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/357 (44%), Positives = 238/357 (66%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+  +   +S+   V+   KL   ++E + IS  +     Y    ++  D
Sbjct: 1   MLDRLKSIEERYERLNELLSDPEVVNDPNKLREYSKEQSDISETVEVYRRYRDASEQLAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+E+R++ + E+  ++ E   + +++  LL+PKD +DDK+ I+EIR   G
Sbjct: 61  AKAMLEDK-LDAEMREMVKEEISELQDETEAMTDQLKLLLVPKDPNDDKNVIMEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+L+RMY RYA L+ WK E++ +S    GGYKEI+  I+G+G +S++K+E+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEIMEASVTGTGGYKEIIIMINGKGAYSKLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVA LPEA E++VDI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQTRKSAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D+ ++ L+   Q+  +  A E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEFVDALIMEDQSSKLQKAEE 356


>gi|328555408|gb|AEB25900.1| peptide chain release factor 1 [Bacillus amyloliquefaciens TA208]
 gi|328913779|gb|AEB65375.1| peptide chain release factor 1 [Bacillus amyloliquefaciens LL3]
          Length = 356

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/356 (44%), Positives = 237/356 (66%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ ++   +S+   V+   KL   ++E + I   +     Y    ++  D
Sbjct: 1   MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+++R++ + E+  +++E   L   +  LL+PKD +DDK+ I+EIR   G
Sbjct: 61  AKAMLEDK-LDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+L+RMY RYA ++ WK EV+ +S    GGYKEI+  I+G+G +S++K+E+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVA LPEA E++VDI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E   NRK  +GSG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQNRKSAVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D+++  L+   Q+  +  A 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQSSKLQQAE 355


>gi|152997601|ref|YP_001342436.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
 gi|189039978|sp|A6W1C2|RF1_MARMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150838525|gb|ABR72501.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
          Length = 362

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 172/361 (47%), Positives = 247/361 (68%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R+ E+   +  +  +     +   ++EYA + P++   + + Q  +
Sbjct: 1   MKESIKLKLESLSDRYDELAALLGVAEVIMDQDLFRAYSKEYAELEPVVKCFNEFQQIDE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   ++ D   D +I+++   E  A   +  EL+  +  LLLPKD +D ++  LE+R
Sbjct: 61  NIAEAELMMTDA--DPDIKEMGVEEYKAGLAQKEELQLVLQKLLLPKDPNDSRNVFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLFRMY RYA  ++WKVE++S+SD + GGYKE++A I G G +S++K
Sbjct: 119 AGTGGDEASIFSGDLFRMYSRYAETQRWKVEIVSASDGEHGGYKEVIARIVGEGAYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PE  E  D+ I   D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEMDEVDDIIINKSDLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+THIPTG++V    E+SQH+NR +AM +L +RL   E ++ A+E+S  RK 
Sbjct: 239 VNKTDSAIRLTHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAELEKAASEQSETRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ ++ G +D +INPL+   QA+ + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEIVAGELDSLINPLVNEFQAEQLAAL 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|229176005|ref|ZP_04303501.1| Peptide chain release factor 1 [Bacillus cereus MM3]
 gi|228607498|gb|EEK64824.1| Peptide chain release factor 1 [Bacillus cereus MM3]
          Length = 358

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ ++   +S+   +    KL   ++E + +   +     Y   +++ +D  
Sbjct: 6   DRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+++RD+ + EV  +E + +EL   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDADMRDMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++ I  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEISIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|303256163|ref|ZP_07342179.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
 gi|331001217|ref|ZP_08324843.1| peptide chain release factor 1 [Parasutterella excrementihominis
           YIT 11859]
 gi|302860892|gb|EFL83967.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
 gi|329568944|gb|EGG50740.1| peptide chain release factor 1 [Parasutterella excrementihominis
           YIT 11859]
          Length = 360

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 183/362 (50%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  EI+  + +      +D +  L++E A I P++ K   Y+Q ++
Sbjct: 1   MKDTMRSKLTQLVRRLEEIDQNLQDPDVTSNMDQFRALSKERAEIEPVVLKAKEYEQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    SD E+++ A  E+ A +K I ++ +E+  LLLPKD +D+K+  LEIR
Sbjct: 61  DLAAAEEML----SDEEMKEFASEEIKATKKAIEQISSELEILLLPKDPNDEKNIYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDLFRMY RYA  +KW+VE +S+S +D GGYKEIV  I G+G +S++K
Sbjct: 117 AGTGGDESALFAGDLFRMYSRYAERQKWQVEFVSASPSDLGGYKEIVVKIVGQGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPEA EI DV I   ++RID  RASG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRVHTSACTVAVLPEADEIGDVVIDPSELRIDVYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +  T+SAVRITH+PTGI+V    E+SQH+N+ RAM VL +R++  +   +  + S+ RK 
Sbjct: 237 IQKTESAVRITHLPTGIVVECQDERSQHKNKERAMGVLISRIHAAQVAEVQAKESSMRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ ++ G +D +I+PL T HQA+++ + 
Sbjct: 297 LIGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDSIMDGDLDCLISPLTTEHQAELLAAL 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|310659436|ref|YP_003937157.1| peptide chain release factor rf-1 [Clostridium sticklandii DSM 519]
 gi|308826214|emb|CBH22252.1| peptide chain release factor RF-1 [Clostridium sticklandii]
          Length = 356

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 253/355 (71%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +I  ++ ++ E+  ++S+   ++    + KL +E+A I P++ K   Y   K + +   
Sbjct: 3   DKIEFVEEKYKELNQKISDPEVINNQSLWQKLMKEHAEIEPVVMKYREYKTVKSQFEGAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + ++D E+R+LA++E+  +E+ +  +  E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  EIL-ESSNDEEMRELAKMELSELEESLEAVSEELRVLLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFRMY  YA+ ++WKVE++SS+D   GGYKE+V  I G+G +SR+KFESGVH
Sbjct: 122 EAALFAGVLFRMYSMYASSKRWKVELMSSNDTGVGGYKEVVFMIIGKGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL-EDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TE++GR+HTS ATVAVLPE  E+        D+R+D  R+SG+GGQ VNTTDS
Sbjct: 182 RVQRVPETESAGRIHTSTATVAVLPEVEEVGEVELNLNDVRVDVFRSSGNGGQSVNTTDS 241

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH+PTGI+++   EKSQ +N+ +A K+LRA+LYD+E ++   E +  RK Q+G+GD
Sbjct: 242 AVRLTHVPTGIVISMQDEKSQLKNKEKAFKILRAKLYDIELEKAQKEVARERKSQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYN+ QGRITDHRI +TLYKL+  L G +D++++ L+T  Q + +  A 
Sbjct: 302 RSERIRTYNYPQGRITDHRIGVTLYKLDAFLNGDLDEMVDALITTDQTEKMQMAE 356


>gi|258542227|ref|YP_003187660.1| peptide chain release factor 1 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633305|dbj|BAH99280.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636364|dbj|BAI02333.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639417|dbj|BAI05379.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642473|dbj|BAI08428.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645528|dbj|BAI11476.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648581|dbj|BAI14522.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651634|dbj|BAI17568.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654625|dbj|BAI20552.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 352

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 164/355 (46%), Positives = 250/355 (70%), Gaps = 5/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
               +++  + +R  E+E +++   + +A+ + + EYA I P++++I+   + +   Q  
Sbjct: 1   MKFDERLDQIVSRALELEAQLASGLNGEAFTQASREYAEIEPVVARINALREVEDGIQQA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+++LA+ E+  + +++ +L+ ++   LLPKD  D +S ILE+R   GG
Sbjct: 61  EQLLA----DPEMKELAEAELAELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA LF  +LF MY RYA L  W+  V+   +++ GG +E +A I+G+GVF+R+K+ESGV
Sbjct: 117 DEAGLFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTS  TVAVLPEA E+DV++   D+R+D  RASG+GGQHVN T+S
Sbjct: 177 HRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVEVNETDLRVDVFRASGAGGQHVNKTES 236

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH+P+GI+V+   EKSQH+NR +AMK+LRARLY+ ER +    R+A+R+ Q+G+GD
Sbjct: 237 AVRLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLYERERAQAHANRAADRRSQVGTGD 296

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLTLYK++ V+ G +D+ ++ L    QA ++ +  
Sbjct: 297 RSERIRTYNFPQGRVTDHRINLTLYKIDRVMLGELDEFVDALTQEEQAALLAAEG 351


>gi|329296264|ref|ZP_08253600.1| peptide chain release factor 1 [Plautia stali symbiont]
          Length = 360

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 167/361 (46%), Positives = 247/361 (68%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+E  + ++  +   D +  L+ EYA +S +      + Q ++
Sbjct: 1   MKSSIVAKLEALQERHEEVEALLGDAGVIGDQDRFRALSREYAQLSDVTRCFREWQQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D+E+RD+AQ E+     +   LE ++  LLLPKD DD++ C +E+R
Sbjct: 61  DVETAEMLL----DDAEMRDMAQEELKLSRDKREVLEQQLQVLLLPKDPDDERPCFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R+W+VE++S++D + GGYKE++A I+G G + RMK
Sbjct: 117 AGTGGDEAAIFAGDLFRMYSRYAEARRWQVEIMSANDGEHGGYKEVIARITGDGAYGRMK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P+  E +  DI   D++IDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPKLPEAELPDINPGDLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRQAAEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGD S+RIRTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDSSDRIRTYNFPQGRVTDHRINLTLYRLDETMEGKLDTLIEPIVQEYQADQLAAL 356

Query: 356 S 356
           +
Sbjct: 357 A 357


>gi|319779045|ref|YP_004129958.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
 gi|317109069|gb|ADU91815.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
          Length = 355

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 167/357 (46%), Positives = 249/357 (69%), Gaps = 9/357 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L  R  E++  ++E      +D + KL+ E + I P++     ++  + +   
Sbjct: 1   MRSRLEQLSQRLIEVDALLAEPDVADDMDRFRKLSRERSEIDPVVELFKEFEAAEGDLNT 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    SD +++++ + E+ + ++ I +LE ++   LLPKD DD +S  LEIRAGTG
Sbjct: 61  AVEMM----SDPDLKEMGEEEMKSTKERIEQLEQKLQLELLPKDPDDGRSVFLEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E+A+F GDLFRMY RYA  + WKVE++S + ++ GGY+E++A I G GV+ ++K+ESG
Sbjct: 117 GDESAIFTGDLFRMYSRYAEQKGWKVELMSENPSELGGYREVIARIEGDGVYGQLKYESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HRVQRVP TE+ GRVHTSA TVAVLPEA E  +V +   D+RIDT RASG+GGQH+N T
Sbjct: 177 AHRVQRVPETESQGRVHTSACTVAVLPEADELAEVVLNPADLRIDTFRASGAGGQHINKT 236

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+     ++SQH+N+ RAM VL AR+ D++R+   ++ +A RK  +GS
Sbjct: 237 DSAVRITHLPTGIVAECQDDRSQHKNKARAMSVLAARINDIKRQEQQSKEAAERKSLVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G +D++ N L++  QA+++ +  
Sbjct: 297 GDRSERIRTYNYPQGRVTDHRINLTLYKLQQIMEGSLDELTNALISERQAELLAALG 353


>gi|228994048|ref|ZP_04153949.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
 gi|229000115|ref|ZP_04159685.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
 gi|229007635|ref|ZP_04165229.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
 gi|228753646|gb|EEM03090.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
 gi|228759652|gb|EEM08628.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
 gi|228765696|gb|EEM14349.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
          Length = 358

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   +S+   +    KL   ++E + +   +     Y   + + +D  
Sbjct: 6   DRLQAVENRYEKLNELLSDPEVISDSNKLREYSKEQSDMQETVEVYREYKDVRAQLRDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+++R++ + EV  +E + +EL   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AML-EEKLDADMREMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
 gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
          Length = 356

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 182/354 (51%), Positives = 248/354 (70%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ E+E  +++    +    Y KLT+ +A +  I+     +   +QE  +   
Sbjct: 4   KLEGLEKKYMELEEALAQPDVFNDQEHYRKLTKAHADLREIVDLFRRHRALQQEMAENKQ 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D +IRD+A  E+   E E+  +E  +   LLP D  D+K+ ILEIRAGTGG E
Sbjct: 64  LLHDE--DPDIRDMAHEEIRRAESELPRIEQALKVALLPTDPLDEKNTILEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY RYA L+ WKVE++S S ++ GGYKEI+  I+G  V+SR+KFE+G HR
Sbjct: 122 AALFAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLIAGDRVYSRLKFEAGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GR+HTSAATVAV+PEA E+DV+I  ED+RID  RASG+GGQHVN T+SAV
Sbjct: 182 VQRVPATETQGRIHTSAATVAVMPEAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PT  +V    E+SQH+N+ RAMKVL +R+   ER+R  +E SA+RK Q+GSGDRS
Sbjct: 242 RITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSELSADRKAQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR TDHRINLTLY L+ +++G +  + + L TA Q + + + +E
Sbjct: 302 ERIRTYNFPQGRCTDHRINLTLYSLDRIMEGELTPLFDALSTAAQTEALKAQAE 355


>gi|15896138|ref|NP_349487.1| peptide chain release factor 1 [Clostridium acetobutylicum ATCC
           824]
 gi|20139340|sp|Q97F68|RF1_CLOAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15025931|gb|AAK80827.1|AE007785_12 Protein chain release factor A [Clostridium acetobutylicum ATCC
           824]
 gi|325510292|gb|ADZ21928.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018]
          Length = 359

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 177/356 (49%), Positives = 248/356 (69%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +++++ E+ +++S+   +     + KL +E++ +  I+ K   Y + K++ + 
Sbjct: 1   MLERLEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+E++++ + E+  +EK + + E E+  +LLPKD +D K+  +EIR GTG
Sbjct: 61  DKEMLRDK-IDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY RYA  + W  EV+S+++ D GG+KEIV  + G G +SRMK+ESG
Sbjct: 120 GEEAALFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+SGR+HTSAATVAVLPE  ++D++I   DIRID  RASG GGQ VNTTD
Sbjct: 180 THRVQRVPNTESSGRIHTSAATVAVLPEVDDVDIEINPNDIRIDVFRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+V    EK Q +N+ +AMKVLRARLY+          + NR+ Q+GSG
Sbjct: 240 SAVRITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLYEKAEAERNAGIAENRRNQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGRITDHRI LT+YKLE  L G ID++IN L+TA QA+ +    
Sbjct: 300 DRSERIRTYNFPQGRITDHRIGLTIYKLEQFLDGDIDEVINGLITAEQAEKMKEMG 355


>gi|77920283|ref|YP_358098.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
 gi|119361572|sp|Q3A129|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77546366|gb|ABA89928.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
           carbinolicus DSM 2380]
          Length = 356

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 180/353 (50%), Positives = 256/353 (72%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ ++++RF E+E  +S+   V     +++LT E+A +S +++    Y +  ++ +    
Sbjct: 5   KLEEVEDRFREVEGLLSDPQVVSQQKRFLELTREHAELSSVVAVYREYKRVSEDIEGNRE 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D  SD E+R++A+ E+  +E    EL  ++  LLLPKD +DDK+ ILEIRAGTGG E
Sbjct: 65  LLQD--SDPEMREMAKAELPELEAHREELAQQLKVLLLPKDPNDDKNVILEIRAGTGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY R+A  + WKVE +S SD++ GG+KEI+A ISG  V+S++K+ESG HR
Sbjct: 123 AALFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMISGNRVYSQLKYESGTHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA GR+HTSA TVAVLPEA ++DVDI   D+RID  RASG+GGQHVN T+SAV
Sbjct: 183 VQRVPETEAQGRIHTSACTVAVLPEAEDVDVDIDPTDLRIDVYRASGAGGQHVNKTESAV 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTG++V    EKSQH+N+ +AMKVL++R+ D        + +A+RK Q+GSGDRS
Sbjct: 243 RITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRILDQVMADQQAQMAADRKSQVGSGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RIRTYNF QGR TDHRI LTLY+LE ++QG + +++ PL   +Q++ + +  
Sbjct: 303 QRIRTYNFPQGRCTDHRIGLTLYRLEGIMQGNLSELVEPLTLHYQSEAMAAQE 355


>gi|89094907|ref|ZP_01167839.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
 gi|89080864|gb|EAR60104.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
          Length = 362

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 251/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R+ E+   +S+   +     + + + EY+ + P++     Y Q ++
Sbjct: 1   MKESILSKLEKLSDRYEELAALLSDPEVISDQEKFREYSMEYSELEPVVKAFEAYTQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++   ++ D  SD ++R++A+ E   ++  I  LE E+  LLLPKD +D ++  LE+R
Sbjct: 61  DLEEAEMMMAD--SDPDMREMAKEEYPEVKARIESLEGELQILLLPKDPNDSRNVFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA ++ W+VEV+S+++ + GGYKEI++ I G  V+S++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAEVQGWRVEVVSANEGEHGGYKEIISRIVGTNVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++       +++I   D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAIMAEMDESAEIEINKADLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    E+SQH+NR +AM +L +RL   E +R A E ++ RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAEEERQAAELASTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V+ G +  ++ PL+  +QA+ +G+ 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLQEVISGELQHVVEPLMNEYQAEQLGAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|229033962|ref|ZP_04188916.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
 gi|228728388|gb|EEL79410.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
          Length = 358

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ ++   +S+   +    KL   ++E + +   +     Y   +++ +D  
Sbjct: 6   DRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+++R++ + EV  +E + +EL   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDADMREMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++ I  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEISIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|312879994|ref|ZP_07739794.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
           paucivorans DSM 12260]
 gi|310783285|gb|EFQ23683.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
           paucivorans DSM 12260]
          Length = 357

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 245/353 (69%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ ++++ F+EIE RM +        +   L + ++ +SPI++ +  Y    +  QD   
Sbjct: 6   KLEEIESTFSEIESRMVDPALSSNLQEMHALGKRHSELSPIVAALREYRGVLRRIQDARE 65

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D  +R+LA+ E+  +E+++  LE  I  LLLP+D +D K  ++EIRAG GG E
Sbjct: 66  LLSQE--DEGLRELAKEELSTLEEQVEPLEQRIKVLLLPQDPNDAKDVVIEIRAGAGGEE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY R+A    W  E+LS++D   GGYKE+V  + G GV+S++K+ESGVHR
Sbjct: 124 AALFAADLFRMYNRFAEREGWGSELLSTNDTGIGGYKEVVFHLKGTGVYSKLKYESGVHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TEA GR+HTS ATVAVLPEA E+DV +  ED++IDT RASG+GGQ+VN TDSAV
Sbjct: 184 VQRIPVTEAGGRIHTSTATVAVLPEAEEVDVQVRTEDLKIDTYRASGAGGQYVNMTDSAV 243

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTG++V    E+SQ +NR++AM++LR RLYD+E ++     +A RK Q+G+GDRS
Sbjct: 244 RITHVPTGLVVTCQDERSQLKNRVKAMQLLRTRLYDLELQKQQAVMAAERKGQVGTGDRS 303

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTY++ Q R+TDHRI  TLYKL+ VL G + +++  L  A Q + + + +
Sbjct: 304 ERIRTYSYPQNRLTDHRIGFTLYKLDQVLDGDLYELVEALTVAEQTEKLKTLA 356


>gi|212703639|ref|ZP_03311767.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
 gi|212672934|gb|EEB33417.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
          Length = 356

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 189/354 (53%), Positives = 255/354 (72%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ E+E  +++    +    Y KLT+ +A +  ++     +    QE ++   
Sbjct: 4   KLEGLEKKYMELEQALAQPDVYNDQDQYRKLTKAHADLRDVVELFRRHRSLTQELEENKQ 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D  SD +I+ +AQ E+ A E E+ ELE++I  LLLPKD  D+K+ ILEIRAGTGG E
Sbjct: 64  LLHD--SDPDIKAMAQEEIAAAEAELPELEHKIKVLLLPKDPLDEKNTILEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY RYA ++ WKVE++S S +D GGYKEI+  ISG  V+S +KFE+G HR
Sbjct: 122 AALFAADLFRMYTRYAEIKGWKVEIMSESPSDSGGYKEIICLISGDRVYSHLKFEAGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GR+HTSAATVAV+PEA E+DV+I  ED+RID  RASG+GGQHVN T+SAV
Sbjct: 182 VQRVPATETQGRIHTSAATVAVMPEAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTG +V    E+SQH+N+ RAMKVL +R+   ER+R  +E SA+RK Q+GSGDRS
Sbjct: 242 RITHIPTGTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSELSADRKAQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR TDHRINLTLY L+ +++G ++ +   L TA Q + + + +E
Sbjct: 302 ERIRTYNFPQGRCTDHRINLTLYSLDRIMEGEVEPLFEALATAAQTEALKAEAE 355


>gi|229076544|ref|ZP_04209504.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
 gi|229099762|ref|ZP_04230687.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
 gi|229105922|ref|ZP_04236546.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
 gi|229118825|ref|ZP_04248174.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
 gi|228664626|gb|EEL20119.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
 gi|228677496|gb|EEL31749.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
 gi|228683651|gb|EEL37604.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
 gi|228706577|gb|EEL58790.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
          Length = 358

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ ++   +S+   +    KL   ++E + +   +     Y   +++ +D  
Sbjct: 6   DRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRDAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+++R++ + EV  +E + + L   +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 66  AMLEDK-LDADMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA ++ WK E++ +S  + GGYKEI+  I+G+G F+++KFE+G H
Sbjct: 125 EAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E+++ I  +D+R+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVAVLPEAEEVEITIHEKDVRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  R+    E   NRK  +G+GDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD IN L+   QA+ + +A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKMEAAE 358


>gi|254509155|ref|ZP_05121254.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
 gi|219547906|gb|EED24932.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
          Length = 362

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 165/362 (45%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q ++
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDIIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAKE--DDEEMREMAQEEIKEAKETIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY ++A  + W+VEV+SS++++ GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKFAEKQGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E +  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +++P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDLASLVDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|114567903|ref|YP_755057.1| peptide chain release factor 1 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|119361631|sp|Q0AUB8|RF1_SYNWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114338838|gb|ABI69686.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 355

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 171/354 (48%), Positives = 245/354 (69%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L+ ++ E+   +S+   +     + KL + ++A+S I++    Y    ++ +D
Sbjct: 1   MLEKLDSLEEKYDELTHLLSQPEVLSDQARFQKLAKAHSALSDIVTMYREYKSLSRQLED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +     E R +   E+  ++++   LE E+  LLLP+D +D+KS I+EIRAGTG
Sbjct: 61  SKEMLVEEED-EEFRQMLADEIPQLQEKKASLEQELRILLLPQDPNDEKSVIMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  + WK+E++ +   D GG KEIV  + GRG +S++KFESG
Sbjct: 120 GEEAALFAGDLFRMYSRYAEEQGWKIEIMDTHYTDIGGIKEIVFVVDGRGAYSKLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE+ GR+HTSAATVAVLPEA E++V I   D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRIPVTESGGRIHTSAATVAVLPEAEEVEVAIDPNDLRIDVYCSSGPGGQSVNTTQ 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG +V    EKSQH+N+ +A++VLRARL ++  +    E +  RK Q+GSG
Sbjct: 240 SAVRITHVPTGEVVTCQDEKSQHKNKAKALRVLRARLKELLEEEKNAEMAGTRKNQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGR++DHRINLTL++LE VL+G +++IIN L+  +QA+ +  
Sbjct: 300 DRSERIRTYNFPQGRVSDHRINLTLHRLESVLEGRLEEIINALIAHYQAERLKQ 353


>gi|154687816|ref|YP_001422977.1| peptide chain release factor 1 [Bacillus amyloliquefaciens FZB42]
 gi|154353667|gb|ABS75746.1| PrfA [Bacillus amyloliquefaciens FZB42]
          Length = 359

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 157/354 (44%), Positives = 235/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ ++   +S+   V+   KL   ++E + I   +     Y    ++  D  
Sbjct: 6   DRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLADAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+++R++ + E+  ++ E   L   +  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 66  AML-EEKLDADMREMVKEEISELQGETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGE 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G+L+RMY RYA ++ WK EV+ ++    GGYKEI+  I+G+G +S++K+E+G H
Sbjct: 125 EAALFAGNLYRMYSRYAEIQGWKTEVMEANVTGTGGYKEIIFMITGKGAYSKLKYENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPEA E++VDI  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +GSGDR
Sbjct: 245 VRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D+++  L+   Q+  +  A 
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQSSKLQQAE 358


>gi|308175429|ref|YP_003922134.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
 gi|307608293|emb|CBI44664.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
          Length = 356

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 160/356 (44%), Positives = 237/356 (66%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ ++   +S+   V+   KL   ++E + I   +     Y    ++  D
Sbjct: 1   MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLTD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D+++R++ + E+  +++E   L   +  LL+PKD +DDK+ I+EIR   G
Sbjct: 61  AKAMLEDK-LDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+L+RMY RYA ++ WK EV+ +S    GGYKEI+  I+G+G +S++K+E+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVA LPEA E++VDI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++    E   NRK  +GSG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQNRKSAVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D+++  L+   Q+  +  A 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQSSKLQQAE 355


>gi|71065612|ref|YP_264339.1| peptide chain release factor 1 [Psychrobacter arcticus 273-4]
 gi|119361583|sp|Q4FSV3|RF1_PSYA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71038597|gb|AAZ18905.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
           arcticus 273-4]
          Length = 362

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 166/361 (45%), Positives = 245/361 (67%), Gaps = 6/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  + +R+ E+   +S+   ++    + +L+ E++ +  I +    Y   + 
Sbjct: 1   MKESLRLRLDQMVDRYEEVTALLSDPSVINDNNKFRELSVEHSDLMDITTLWQNYVGAET 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++ D   ++ +  SD +++++ Q E+ +    I E+E  +N ++LPKD +D     LEIR
Sbjct: 61  DQADAEAMLKEA-SDPDMKEMMQEEIDSARDTIVEMEEALNVMMLPKDPNDKVPAFLEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY++YA  + W +EVLS+++ + GGYKEI+  +SG  V+ R+K
Sbjct: 120 AGTGGDEAAIFSGDLFRMYQKYAQAQGWTLEVLSANEGEHGGYKEIITRVSGNSVYGRLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GRVHTSA TVAV+PE    D  ++   DIR DT R+SG+GGQH
Sbjct: 180 FESGVHRVQRVPDTESQGRVHTSACTVAVMPEVEIDDTVNLNPADIRFDTFRSSGAGGQH 239

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVR+THIPTG +V    E+SQH+NR +AMK+L +++  V+ +   +     R+ 
Sbjct: 240 VNTTDSAVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRD 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G +D+I++ LL  HQA ++ S 
Sbjct: 300 LVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDSIMEGDLDEILDALLREHQADLMASV 359

Query: 356 S 356
            
Sbjct: 360 G 360


>gi|332978486|gb|EGK15198.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)]
          Length = 362

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 173/361 (47%), Positives = 251/361 (69%), Gaps = 6/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  + +RF E+   +S+  ++   + + +L+ E++ +S I S    Y Q + 
Sbjct: 1   MKDSLRERLDQMVDRFEEVTALLSDPGTISDNNKFRELSMEHSELSEITSLWQRYRQAET 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++QD   +I +  SD E++ + Q E+ +   +I  +E E+N ++LPKD +D     LEIR
Sbjct: 61  DKQDALEMINEA-SDPEMKAMMQEEIDSAADDIAAMEEELNVMMLPKDPNDKVPAFLEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMYERYA+ + W +EVLS+++ + GGYKEI+  +SG  V+ R+K
Sbjct: 120 AGTGGDEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIITRVSGNDVYGRLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAV+PE    D  ++   DIR+DT R+SG+GGQH
Sbjct: 180 FESGAHRVQRVPETESQGRVHTSACTVAVMPEVKIDDTVELNPADIRMDTFRSSGAGGQH 239

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVR+THIPTG++     E+SQH+NR +AM++L AR+   + +   +   A R+ 
Sbjct: 240 VNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADALRRN 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G +D++++ L   HQA ++ S 
Sbjct: 300 LVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDAIMEGDLDELLDALTREHQADLMASV 359

Query: 356 S 356
           S
Sbjct: 360 S 360


>gi|260779385|ref|ZP_05888277.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605549|gb|EEX31844.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 362

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q ++
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAKE--DDAEMREMAQEEIKEAQETIERLNDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY ++A  + W+VEV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA++ E  E +  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEAKRAAEESDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +++P++  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTIYRLNEVMEGDLASLVDPVIQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|333029894|ref|ZP_08457955.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
 gi|332740491|gb|EGJ70973.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
          Length = 361

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 235/353 (66%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ DL  RF E+   +++   +     ++KLT+EY  +S +++    Y    Q   +   
Sbjct: 9   KLEDLVARFDEVSTLITDPAVIADQTRFVKLTKEYKELSDLMNARKEYIAALQGVTEAKE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  H SD E++++A+ E+   E  I ELE  I  LL+PKD  D+++ I+EIRAGTGG E
Sbjct: 69  IIA-HESDPEMKEMAREELEDCETRIPELEETIKLLLIPKDPQDERNAIMEIRAGTGGDE 127

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY +Y   + W VE+ + ++   GG+KEIV ++SG  V+  +K+ESGVHR
Sbjct: 128 AALFAGDLFRMYSKYCENKGWTVEINNFNEGTAGGFKEIVFSVSGDNVYGILKYESGVHR 187

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAVLPEA E+DV++   DI + T R+ G+GGQHVN  ++ V
Sbjct: 188 VQRVPETESQGRVHTSAITVAVLPEAEEVDVELNPADIELQTARSGGAGGQHVNKVETKV 247

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            +TH PTG++V     +SQH NR +AM++LR++LY++E ++   ERS  RK  + +GDRS
Sbjct: 248 MLTHKPTGLVVICQEGRSQHSNREKAMQILRSKLYEIEYEKANKERSEQRKSLVSTGDRS 307

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            +IRTYN+ QGRITDHRIN T+Y L+  + G I D I+ L+ A  A+ +  + 
Sbjct: 308 AKIRTYNYPQGRITDHRINYTIYNLQAFMDGDIQDCIDHLIVAENAERMKESE 360


>gi|304317929|ref|YP_003853074.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779431|gb|ADL69990.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 353

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 179/355 (50%), Positives = 251/355 (70%), Gaps = 7/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+ E+  ++S+      +D + K+ +E+A++  I+ K   Y +   + + 
Sbjct: 1   MIDKLKTIEDRYVELSRKLSDPESMKDMDEWKKMAKEHASLEEIVQKYREYKKVLDDIKS 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I     D +++D+AQ E+ ++E+   +L NEI  LLLPKD +D+K  I+EIRAG G
Sbjct: 61  TKEIIEL---DDDLKDMAQEELKSLEERENKLLNEIKLLLLPKDPNDEKDVIMEIRAGAG 117

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  + WK E++SS+  + GG+KE++  I+G+G +SR+KFESG
Sbjct: 118 GEEAALFAYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVILNIAGKGAYSRLKFESG 177

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TEA GR+HTS ATVAVLPE  ++D++I   DI+ID  R+ G GGQ VNTTD
Sbjct: 178 VHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTD 237

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI++    E+SQ QNR RAMK+LRA+LY++ R+    E S  RKLQ+G+G
Sbjct: 238 SAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKEKEISMTRKLQVGTG 297

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRI LTLYKL+ VL G +D+II+ LL   QA+ + S 
Sbjct: 298 DRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQAERLESM 352


>gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254790877|sp|B8J4R4|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 356

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 185/353 (52%), Positives = 254/353 (71%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ E+E  +++    +    Y KLT+ +A +S ++     +    +E  +   
Sbjct: 4   KLEGLEKKYLELEEALAQPDVFNDQDQYRKLTKAHADLSDVVELFRRHRAVSEELAENRL 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D EIR +AQ EV   E E+  LE+E+  +LLP D  D+K+ ILEIRAGTGG E
Sbjct: 64  LLHDE--DPEIRAMAQEEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY RYA L+ WKVE++S S +++GGYKEI+  I+G  V+S +KFE+G HR
Sbjct: 122 AALFAADLFRMYTRYAELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATEA GR+HTSAATVAV+PEA E+DV+I  ED+RID  RASG+GGQHVN T+SAV
Sbjct: 182 VQRVPATEAQGRIHTSAATVAVMPEAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PT  +V    E+SQH+N+ RAMKVL +R+   ER+R ++E SA+RK Q+GSGDRS
Sbjct: 242 RITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQSSELSADRKAQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF QGR TDHRINLTLY L+ +++G ++ ++  L TA QA+ + + +
Sbjct: 302 ERIRTYNFPQGRCTDHRINLTLYSLDRIMEGELESLVEALGTAAQAEALKAQA 354


>gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea sp. MED297]
 gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297]
          Length = 361

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 250/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    H+++ +L  R+ E+ L +S+   +     + + ++EYA +  ++   S Y   + 
Sbjct: 1   MKDSIHQKLTELTERYEELGLLLSQPDVISDQTAFRQYSQEYAELENVVQCFSRYTACEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D   D ++R++ + E+ + E    EL+ ++  LLLPKD +D K+  LE+R
Sbjct: 61  DIEAARGLLDDE--DPDMREMGKDELASAEALREELDEQLQILLLPKDPNDHKNVYLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA    W+VEVLS+S+ + GGYKEI++ +SG  V+S++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAEKMGWRVEVLSASEGEHGGYKEIISRLSGERVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PEA E   ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVMPEADELESIEIDKNDLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+TH+PTGI+V    E+SQH+N+ RAM +L A+L D +    A E++  RK 
Sbjct: 239 VNKTDSAIRLTHLPTGIVVECQDERSQHKNKARAMSLLAAKLKDAQESAAAREQADQRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G +D II PLL  HQA++    
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIGGQLDHIIQPLLQEHQAQLFAEM 358

Query: 356 SE 357
            +
Sbjct: 359 GQ 360


>gi|167759398|ref|ZP_02431525.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
 gi|167662955|gb|EDS07085.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
          Length = 356

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 243/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R  E+   + E    +    + KL +E   ++PI+     Y   KQ  +D  
Sbjct: 3   DKLEDLLIRLEEVLSELQEPNVANDQNRFRKLMKEQNELTPIVEAYKEYKACKQAIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R+LA+ E+   +  + ELE+E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  QMLEEESD-EEMRELAKEELNDSKARVEELEHELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R+WKVE++   +   GG K +   I+G+G +S MK+ESGVH
Sbjct: 122 EAALFAAEIYRMYLHYAESRRWKVELVECEEIGIGGMKNVTFMINGKGAYSVMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA ++D+ I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEDVDIQIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LRA+LYD+E ++  +  +  RK QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDMECQKRHDAEAEARKSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYKL+ ++ G I +II+  + A QA  + + +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQAAKLANMNE 356


>gi|39998194|ref|NP_954145.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
 gi|61214645|sp|Q748B1|RF1_GEOSL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39985140|gb|AAR36495.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
 gi|298507132|gb|ADI85855.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400]
          Length = 355

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 258/355 (72%), Gaps = 8/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           ++I +L+ R+ E+E  +++   +     + +L+ E+  ++P+I     Y +  +E +   
Sbjct: 3   EKIEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKKVLEEMEGNR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E++++AQ E+  +E+   ELE EI  LLLP+D +DD++ ILEIRAGTGG 
Sbjct: 63  ELLA----DPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF GDLFRMY R+A   +WKVEV+S+S+++ GG+KEIVA I G+GVF+++K+ESG H
Sbjct: 119 ESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESGTH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSA TVAVLPEA +I+VDI   D++ID  RASG+GGQHVN T+SA
Sbjct: 179 RVQRVPETEAQGRIHTSACTVAVLPEAEDIEVDINPADLKIDVYRASGAGGQHVNKTESA 238

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V    E+SQ +NR +AMKVL+ ++ D   +      +A+RK Q+GSGDR
Sbjct: 239 VRITHIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQNARIAADRKQQVGSGDR 298

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLY+L+ +++G I ++++ L T +Q + + + +E
Sbjct: 299 SERIRTYNFPQGRMTDHRIGLTLYRLDSLMEGDIAEVVDALRTHYQMEALKAQAE 353


>gi|160947003|ref|ZP_02094206.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
 gi|158447387|gb|EDP24382.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
          Length = 365

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 249/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L  +F E+E ++ +   +     + KL +E+  + PI+ K   Y + K+E ++  
Sbjct: 12  DKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEENK 71

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+++L + E+  +E  I + E ++  LLLPKD +D+K+  +E+RAGTGG 
Sbjct: 72  EMLKESLDD-EMKELVKEEISELEDSIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTGGD 130

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF  DL RMY  +A  +KWK E++S S+   GG KE+V  + G G +S++K+ESGVH
Sbjct: 131 EAGLFAEDLLRMYRMFADKQKWKTEIMSISEQGVGGIKEVVFLVKGHGAYSKLKYESGVH 190

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+SGR+HTSAATVAVLPE  ++DV I   D+RID  RASG+GGQ VNTTDSA
Sbjct: 191 RVQRVPATESSGRIHTSAATVAVLPEVEDVDVVINQNDLRIDVYRASGNGGQCVNTTDSA 250

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG++V    EKSQ +N+ +AMK+L++RLY+  ++    + +  RK QIGSGDR
Sbjct: 251 VRITHIPTGVVVTCQDEKSQLKNKEKAMKILKSRLYEKYQEEQNKDIADARKSQIGSGDR 310

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRIN+T+Y+L+  L G I ++I+ L+T+ QAK + + +E
Sbjct: 311 SERIRTYNFPQGRVTDHRINMTIYQLDSFLNGDISEMIDALITSDQAKKMLAIAE 365


>gi|114777343|ref|ZP_01452340.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
 gi|114552125|gb|EAU54627.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
          Length = 357

 Score =  282 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 183/355 (51%), Positives = 254/355 (71%), Gaps = 4/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + ++ ++ +R  EI + +++         Y  L+ E++ I P+  +   Y   +Q+  D
Sbjct: 1   MNNRLDNILHRREEIAVMLADPDVTSDNKRYTALSREFSEIEPVAEEAQHYLDLQQQLAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D + D+E++++A+ E   I++ I   +  ++ LLLPKD +D++  ILEIRAGTG
Sbjct: 61  NLELIADPDCDAELKEMAEAEAREIKQAISASDAALSMLLLPKDPNDNRDVILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY RYA  + +KVE+LS+SD   GGYKEI+A ISG GVFSR KFESG
Sbjct: 121 GDEAALFAADLFRMYSRYAETQGYKVEILSASDTGIGGYKEIIAQISGNGVFSRFKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTSA TVA+LP A E+D++I  ED+RID  RASG+GGQHVN T+
Sbjct: 181 AHRVQRVPETESGGRIHTSACTVAILPVAEEVDINIRPEDLRIDVYRASGAGGQHVNKTE 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIP+G++V    + SQH+N+ +AMKVL+ARL+D E+  +  ERS  RK  +GSG
Sbjct: 241 SAVRITHIPSGLVVTCQDQASQHKNKAQAMKVLQARLFDKEQSELDAERSQARKGMVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYN+ QGRITDHRI LTLYKLE +L G + ++++ L+T HQA+++ + 
Sbjct: 301 DRSERIRTYNYPQGRITDHRIGLTLYKLEQILGGDMGELLDALITYHQAELLAAQ 355


>gi|283798430|ref|ZP_06347583.1| peptide chain release factor 1 [Clostridium sp. M62/1]
 gi|291073835|gb|EFE11199.1| peptide chain release factor 1 [Clostridium sp. M62/1]
 gi|295090782|emb|CBK76889.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium cf.
           saccharolyticum K10]
 gi|295115024|emb|CBL35871.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SM4/1]
          Length = 358

 Score =  282 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 256/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   ++          + KL +E A ++PI+     Y Q  Q+ +D  
Sbjct: 3   DRLDDLLIRYEELMEELNNPYVVEDQKKFRKLMKEQADLAPIVEAYKNYKQAHQDVEDSV 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R+LA+ E+   +K I ELE E+  LLLPKD +D+K+ ++EIRAG GG 
Sbjct: 63  ALLEEESD-EEMRELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY RYA  ++WK E++S ++N  GG+KE+V  ++G+G +S++K+ESGVH
Sbjct: 122 EAALFASELYRMYVRYAERKRWKTEIVSLNENGIGGFKEVVFMVTGQGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAV+PEA E D++I + D RID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVMPEAEEFDIEIDMNDCRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI++ + +EKSQ QN+ +A ++LR++LYD+E +R  +E S  R+ QIG+GDR
Sbjct: 242 VRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELERRQSEESEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+T+HRI LTLYK++ V+ G +D++I+ L+ A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTEHRIKLTLYKIDSVMDGELDELIDSLIAADQAAKLAKLNE 356


>gi|323486285|ref|ZP_08091611.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
           WAL-14163]
 gi|323693924|ref|ZP_08108111.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
 gi|323400395|gb|EGA92767.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
           WAL-14163]
 gi|323502021|gb|EGB17896.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
          Length = 357

 Score =  282 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 255/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   ++        + + KL +E A ++P++     Y +  Q+ +D  
Sbjct: 3   DRLDDLLIRYEELLEELNSPDVAMDQNRFRKLMKEQADLTPLVDAYKEYKKANQDVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+RD+A+ E+   +K I E+E ++  LLLPKD +DDK+ ++EIRAG GG 
Sbjct: 63  ALL-EEESDEEMRDMAKEELADAKKRIEEMEQQLKILLLPKDPNDDKNVMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  +A   +WK E++S ++N  GG+KE+V  ++G+G +S+MK+ESGVH
Sbjct: 122 EAALFASELYRMYVHFAESNRWKTELVSVNENGIGGFKEVVFMVTGQGAYSKMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS A+VAV+PEA E DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTASVAVMPEAEEFDVVIDDKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++  N+ +  R+ QIG+GDR
Sbjct: 242 VRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQNQEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+T+HRI LTLYK++ V+ G ++++I+ L+ A QA  +    E
Sbjct: 302 SEKIRTYNFPQGRVTEHRIKLTLYKIDSVMNGELNELIDSLIAADQAAKLAKMGE 356


>gi|290969299|ref|ZP_06560824.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780805|gb|EFD93408.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
           28L]
          Length = 360

 Score =  282 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 166/358 (46%), Positives = 257/358 (71%), Gaps = 5/358 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N++ ++E R+S+   +     + KLT+E+A+++PII     Y +  +  +
Sbjct: 1   MFLDKVQAVENKYNDLEQRISDPAVIARQKEWQKLTKEHASLAPIIEAYRKYQEVCKTIR 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++ D ++D+E+  +A+ E+  + KE   LE +++ L+LPKD  DDK+ I+EIR G 
Sbjct: 61  GDRELLDDPSTDTELTAMAKEEIAELTKEQAALEEKLHILMLPKDPHDDKNVIMEIRGGA 120

Query: 121 GGSEAALFVGDLFRMYERYAALR-KWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           GG EAALF GDLFRMY +Y   +  WK E++S+++ + GGYKE+V ++ G GV+ ++K+E
Sbjct: 121 GGDEAALFAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFSVEGAGVYGKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TEA GR+HTS ATVAVLPEA ++++D+ ++D+R+D  RASG+GGQH+N 
Sbjct: 181 SGVHRVQRVPVTEAGGRIHTSTATVAVLPEADDVEIDLDMKDVRVDYFRASGAGGQHINK 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH+P+GI+V    E+SQ +NR +A++VL+ARL D  ++  A E +  R+ Q+G
Sbjct: 241 TSSAVRMTHMPSGIVVECQDERSQLENRTKALRVLKARLLDQAQQAAAQEVTEARRSQVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYN+ QGR+TDHRIN+TLYKL+ VL G +D+ I  L  A +A+++ +  
Sbjct: 301 TGDRSERIRTYNYPQGRVTDHRINVTLYKLDAVLNGDLDEFIQALAEARRAELMQAEE 358


>gi|209694372|ref|YP_002262300.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
 gi|238058709|sp|B6EHH5|RF1_ALISL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208008323|emb|CAQ78475.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
          Length = 362

 Score =  282 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 155/362 (42%), Positives = 239/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L+ EY+ +  +      Y++ ++
Sbjct: 1   MKASIRVKLETLVERYEEVQHLLGDPGVIGDQNKFRALSREYSQLEEVTQCFQAYEKVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+   ++    L +E+  LL+PKD +D+++C LEIR
Sbjct: 61  DLVAAQEMAQE--DDAEMREMAQDEIKEAKEASERLTDELQVLLIPKDPNDERNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F G+LFRMY R+A  + W++EV+SS  ++ GG+KE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGNLFRMYSRFAEKKGWRIEVMSSHASEQGGFKEMIAKVSGDGAYGILK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA T+AV+ E  E D  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTIAVMAEIPEADLPEIKSSDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  R A   S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEARRAAVVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ Q R++DHRINLT+Y+L  V++G +  +I P++  +QA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQSRVSDHRINLTIYRLNEVMEGDLAALIEPVVLEYQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|297181249|gb|ADI17443.1| protein chain release factor a [uncultured Rhodospirillales
           bacterium HF0070_31K06]
          Length = 357

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 187/355 (52%), Positives = 253/355 (71%), Gaps = 3/355 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
               +++  + +R AE+   M+        Y   ++EYA +SP++ K       ++E   
Sbjct: 1   MSVMERLDSVISRHAELAALMASGDLDAGQYADYSKEYAELSPVVEKAQELKSLREELGG 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D  +DSE+++LA+ E   +  ++ ++E  +  LLLPKD  D+KS ILEIRAGTG
Sbjct: 61  LEELLADPETDSEMKELAEAERQELRDQVPDIEESLRILLLPKDAADEKSAILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL RMY+RYA +  W+ E L  S+ + GG KE   +I+GRGVF+R+KFESG
Sbjct: 121 GDEAALFASDLMRMYQRYAEMHGWRTEFLDLSETELGGVKEAALSIAGRGVFARLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP T++ GR+HTSAATVAVLPEA E+D+ I   D+R+DT RASG+GGQHVN TD
Sbjct: 181 VHRVQRVPTTDSGGRIHTSAATVAVLPEAEEVDIQIDTSDLRVDTYRASGAGGQHVNKTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+RITH+PTGI+V    EKSQH+NR +AMKVLRARLYD ER+ +  ER+A+RK Q+GSG
Sbjct: 241 SAIRITHLPTGIVVQCQDEKSQHKNRAKAMKVLRARLYDHERQTLDAERAADRKTQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGR+TDHRINLTL+KL+ +L G  +D++++ L+   QA  +  
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLDRILAGDELDEVVDLLIAEDQAARLAE 355


>gi|316932075|ref|YP_004107057.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
 gi|315599789|gb|ADU42324.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
          Length = 361

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 184/358 (51%), Positives = 255/358 (71%), Gaps = 2/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E ++      + Y+++T E + ++P++  +  Y Q + E  
Sbjct: 1   MSSLPEAKLDVLLAHHAALEAQLMAQVGAEDYVRITRELSELNPLVEAVKSYRQVRDELG 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           ++  ++ D  ++ E+R +A+ E  A++    EL  +I   LLPKD  D+++ +LEIRAGT
Sbjct: 61  EIDELLEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPKDAMDERNVMLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYE++AAL+ W VEV+S+S+   GG+KEI+A + GRG F+++KFES
Sbjct: 121 GGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  ++DVDI  ED+RI+TMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKQEDLRIETMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITH+PTGI+V     +SQH+NR  AM +LR+R+YD ER+R+   RSA RK ++GS
Sbjct: 241 ESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRVDAARSAERKEKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQA  +    
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQAAQLAEQG 358


>gi|39933683|ref|NP_945959.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192289040|ref|YP_001989645.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
 gi|61214634|sp|Q6NC66|RF1_RHOPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229470355|sp|B3QCF6|RF1_RHOPT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39647529|emb|CAE26050.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192282789|gb|ACE99169.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
          Length = 361

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 183/358 (51%), Positives = 255/358 (71%), Gaps = 2/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E ++      + Y+++T E + ++P++  +  Y Q + E  
Sbjct: 1   MSTLPEAKLDVLLAHHAALEAQLMAQVGAEDYVRITRELSELNPLVEAVKSYRQVRDELG 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           ++  ++ D  ++ E+R +A+ E  A++    EL  +I   LLPKD  D+++ +LEIRAGT
Sbjct: 61  EIDELLEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPKDAMDERNVMLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYE++AAL+ W VEV+S+S+   GGYKEI+A + GRG F+++KFES
Sbjct: 121 GGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGYKEIIAEVKGRGAFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  ++DVDI  +D+RI+TMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKQDDLRIETMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITH+PTGI+V     +SQH+NR  AM +LR+R+YD E++R+   RSA RK ++GS
Sbjct: 241 ESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLDAARSAERKAKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQA  +    
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQAAQLAEQG 358


>gi|93006237|ref|YP_580674.1| peptide chain release factor 1 [Psychrobacter cryohalolentis K5]
 gi|119361584|sp|Q1QAW3|RF1_PSYCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|92393915|gb|ABE75190.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
           cryohalolentis K5]
          Length = 362

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 165/361 (45%), Positives = 246/361 (68%), Gaps = 6/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  + +R+ E+   +S+   +   + + +L+ E++ +  I +    Y   ++
Sbjct: 1   MKESLRLRLDQMVDRYEEVTALLSDPSVISDNNKFRELSVEHSDLMDITTLWQNYVGAEK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           ++ D   ++ +  SD +++++ Q E+ +    I E+E  +N ++LPKD +D     LEIR
Sbjct: 61  DQADAEAMLKEA-SDPDMKEMMQEEIDSARDTIVEMEEALNLMMLPKDPNDKVPAFLEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY+++A  + W +E+LS+++ + GGYKEI+  +SG  V+ R+K
Sbjct: 120 AGTGGDEAAIFSGDLFRMYQKFAQNQGWTLEILSANEGEHGGYKEIITRVSGNSVYGRLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GRVHTSA TVAV+PE    D  D+   DIR DT R+SG+GGQH
Sbjct: 180 FESGVHRVQRVPDTESQGRVHTSACTVAVMPEVEIDDTVDLNPADIRFDTFRSSGAGGQH 239

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVR+THIPTG +V    E+SQH+NR +AMK+L +++  V+ +   +     R+ 
Sbjct: 240 VNTTDSAVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRD 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G +D+I++ LL  HQA ++ S 
Sbjct: 300 LVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDSIMEGDLDEILDALLREHQADLMASI 359

Query: 356 S 356
            
Sbjct: 360 G 360


>gi|238923860|ref|YP_002937376.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656]
 gi|259585240|sp|C4Z911|RF1_EUBR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238875535|gb|ACR75242.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656]
          Length = 358

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 170/354 (48%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL + + E+   +SE    +    + KL +E + ++PI+     Y + KQ  +D  
Sbjct: 3   DKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+R+LA+ E+   ++++ ELE ++  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  AIL-DEESDEEMRELAKEELKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R WKVE L + +   GG K +   + G G +S +K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+ TS  +VAV+PEA ++DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LR +LYD+E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQDAEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +E+IRTYNF QGR+TDHRINLTLYKL+ +L G I +II+  + A QAK + +  
Sbjct: 302 AEKIRTYNFPQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQAKKLSNME 355


>gi|261855644|ref|YP_003262927.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
 gi|261836113|gb|ACX95880.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
          Length = 364

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 168/351 (47%), Positives = 230/351 (65%), Gaps = 10/351 (2%)

Query: 3   FLSH---KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKK 56
            L      ++  L  R+ E+   +S+   ++    +  L++E+A +  ++  +  Y + K
Sbjct: 1   MLPSALLNRLFALSERYDELNALLSDPEVINNQDRFRSLSKEHARLHDLVVVLDRYQKAK 60

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
            + Q    +  +   D E+  LA  E+  ++ EI  L+  +   LLP D  DD   ILEI
Sbjct: 61  ADLQAAEHMSKEP--DREMAALALEEMKELQTEIESLDEALKVHLLPHDPADDGDVILEI 118

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           RAGTGG EAA+F GDL RMY +YA  + W+ E+LS    + GGY+E++A ISG GV++ +
Sbjct: 119 RAGTGGDEAAIFAGDLLRMYLKYADTQGWRTEILSEQPGEHGGYREVIAQISGDGVYAAL 178

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQ 235
           KFESG HRVQRVP TE  GRVHTSAATVAV+P   E +        +RIDT RASG+GGQ
Sbjct: 179 KFESGAHRVQRVPTTETQGRVHTSAATVAVMPVVPESEAITLDPSTLRIDTFRASGAGGQ 238

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           H+N TDSA+R+TH+PTG++V    E+SQH+N+ RA+ VL ARL D ER++   E++A RK
Sbjct: 239 HINKTDSAIRVTHLPTGMVVECQDERSQHKNKARALSVLAARLADAERQKAHAEQAATRK 298

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +GSGDRSERIRTYNF QGR+TDHRINLTLY+L+ VL G +D II+PL  
Sbjct: 299 ALVGSGDRSERIRTYNFPQGRVTDHRINLTLYQLDRVLLGDLDPIIHPLRQ 349


>gi|163793919|ref|ZP_02187893.1| Protein chain release factor A [alpha proteobacterium BAL199]
 gi|159181030|gb|EDP65547.1| Protein chain release factor A [alpha proteobacterium BAL199]
          Length = 356

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 189/357 (52%), Positives = 260/357 (72%), Gaps = 6/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP--SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
               +++  +  R  E+E R++         + +L++E A ++P++  + +  + + E  
Sbjct: 1   MSLDEKLDRVLTRALELEARLASPDGFVQSDFQRLSKELAELTPVVETVGLLRRTRAELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +     SD E+R+LA+ E  AIE ++ +LE  +   LLP+D  D ++ ILE+RAGT
Sbjct: 61  DAQALA--EESDGEMRELAEEEAAAIEAKLPDLERAMMLHLLPRDEADARNAILEVRAGT 118

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLF MY+RYA  R W+ EV+  S+N+ GGYKE +ATISG+ VF+ +KFES
Sbjct: 119 GGDEAALFAADLFAMYQRYAQGRGWRFEVMEVSENEIGGYKEAIATISGQSVFAHLKFES 178

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE+ GR+HTSAATVAVLPEA E+DV I  +D+RID  R+SG+GGQHVNTT
Sbjct: 179 GVHRVQRVPATESQGRIHTSAATVAVLPEAEEVDVAIDDKDLRIDVYRSSGAGGQHVNTT 238

Query: 241 DSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++VT  + KSQH+NR +AMK+LRARL+D ER R  +ER+A+RK QIGS
Sbjct: 239 DSAVRITHLPTGVVVTQQDEKSQHKNRAKAMKILRARLFDQERTRRDSERAADRKSQIGS 298

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           GDRSERIRTYNF QGR+TDHRINLTLYK++ V+ G  +D+I++ L+   +A+ + + 
Sbjct: 299 GDRSERIRTYNFPQGRVTDHRINLTLYKIDKVMSGEALDEIVDALIAEDEAERLATL 355


>gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Vibrio angustum S14]
 gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14]
          Length = 362

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 247/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + ++      + +  L++EY+ +  +      Y Q K+
Sbjct: 1   MKQSILVKLETLVERYEEVQHLLGDASVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+   + EI  L +E+  LL+PKD +DD++C +EIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++E+++ + ++ GGYKE++A ++G GV+  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAESRGWRIEIINENRSEQGGYKEMIAKVNGDGVYGILK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAVLPE  E +  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E ++   E ++ R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRI LTLY+L  V++G +D +I P+ T +QA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRITLTLYRLNEVMEGDLDALIQPVFTEYQADQLAAM 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|299821847|ref|ZP_07053735.1| peptide chain release factor RF1 [Listeria grayi DSM 20601]
 gi|299817512|gb|EFI84748.1| peptide chain release factor RF1 [Listeria grayi DSM 20601]
          Length = 358

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 241/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ E+   +S+   V    +L   ++E ++IS  +     Y +   +  +  
Sbjct: 3   DRLQSVENRYEELNELLSDPDVVSDPKRLRDLSKEQSSISQTVETYRDYKEVTDQIAETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D ++R++A+ E+  +++    LE ++  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLNEKLDD-DMREMAKEELNELQENKTHLEEKLKLLLVPKDPNDDKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA  R WK E++ ++    GGYKE++  I+G G FSR+K+E+G H
Sbjct: 122 EAALFAGDLFRMYSRYAESRGWKAEIMDANPTGIGGYKEVIVMINGDGAFSRLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA ++++DI  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEDVEIDIQDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQIKNKEKAMKVLRARIYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF Q R+TDHRI LT+ KL+ V++G ID+II+ L+   Q   +   ++
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQVMEGKIDEIIDALIVEDQTSKLEHLND 356


>gi|288956982|ref|YP_003447323.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
 gi|288909290|dbj|BAI70779.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
          Length = 361

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 184/361 (50%), Positives = 251/361 (69%), Gaps = 7/361 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
               ++   +  R+ E+   ++   +    + +L++EYA ++PI + I+   + + E  D
Sbjct: 1   MSLDEKFDKVMARYDELRDTLAAGLAESGDFARLSKEYADLTPIAAAIAELKRGRAEAAD 60

Query: 62  LHTVIG----DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           L  +I     D  +D E+R +A+ E   + K I ELE ++   LLPKD  D+K+ ILE+R
Sbjct: 61  LAEMIAAMMGDSGADPEMRSMAEEEFHLLTKRIPELERKVQISLLPKDEADEKNAILEVR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  +LF MY RYA L  W+ E +  S+   GGYKE  A I+GRGVF+++K
Sbjct: 121 AGTGGDEAALFAAELFEMYRRYAGLHGWRFEAMDVSETGIGGYKEATANITGRGVFAKLK 180

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQRVPATEA GR+HTSAATVAVLPEA E+D+ I  +D+RID  R+SG GGQ V
Sbjct: 181 FESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEKDLRIDVFRSSGPGGQSV 240

Query: 238 NTTDSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTG++V+  + KSQH+N+ +A+KVLRARLYD ER      R+A+RK Q
Sbjct: 241 NTTDSAVRITHLPTGLVVSQQDEKSQHKNKAKALKVLRARLYDRERAEKDAARAADRKNQ 300

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           +GSGDRSERIRTYNF QGR+TDHRINLTLYK++ V+ G  +D++++ L+   +A  +   
Sbjct: 301 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDKVMAGEALDELVDALVAEDEAARLAEL 360

Query: 356 S 356
            
Sbjct: 361 G 361


>gi|283850912|ref|ZP_06368198.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
 gi|283573835|gb|EFC21809.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
          Length = 357

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 178/354 (50%), Positives = 261/354 (73%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ E+E ++S+   V+    Y KLT+ +A ++ +++    + Q  ++ ++   
Sbjct: 4   KLESLERKYVELEKQLSDPSVVNDQERYRKLTKAHADMADMMAAFREHKQLSRDLEENQE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   D E+R+LA  E+ AI++ + E+E  +  LLLPKD  DDK+ +LEIRAGTGG E
Sbjct: 64  MAQDP--DPEMRELALAEIKAIKEALPEIEARLKLLLLPKDPMDDKNILLEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+WKVE++S S+   GGYKE++A+I+G  V+SR+K+ESG HR
Sbjct: 122 AALFAGDLFRMYCRYAEARRWKVELMSQSETGSGGYKEVIASIAGDKVYSRLKYESGAHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSA TVA++PEA E+DV I   D+RID  R+SG GGQ VNTTDSAV
Sbjct: 182 VQRVPATESQGRIHTSAVTVAIMPEAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDSAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+P+G++V    EKSQH+N+ +A+KVLR+RL  +E+++   E+ A R+ Q+G+GDRS
Sbjct: 242 RVTHVPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQEKQRLEQEATRRSQVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF Q R+TDHRINLTLY+LE VL+G +D++   L+  +Q++ + + ++
Sbjct: 302 ERIRTYNFPQSRVTDHRINLTLYRLEAVLEGDLDELCEGLIAHYQSEALKAQAD 355


>gi|77360001|ref|YP_339576.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|119361581|sp|Q3IK95|RF1_PSEHT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76874912|emb|CAI86133.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 361

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 245/355 (69%), Gaps = 7/355 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R+ E++  +S+   +   + +  L++EY+ +  ++     Y Q +Q+      
Sbjct: 8   KLEILVERYEEVQALLSDPSVIRDQNRFRALSKEYSDLEEVVKTFLSYQQAQQDVISAEE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D  SD +IR++AQ E    + +I  +E+EI  L+LPKD  D+ +  LE+RAGTGG E
Sbjct: 68  MLKD--SDPDIREMAQEEYKEAKAQILTIEDEIQVLMLPKDPKDNNNVYLEVRAGTGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  +KWKV+V+++++ + GGYKEI+A ISG GVF ++KFESGVHR
Sbjct: 126 AAIFAGDLFRMYSRYAETKKWKVDVVTTNEGEHGGYKEIIANISGEGVFGQLKFESGVHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GRVHTSA TVAV+        ++I   D+++DT RASG+GGQHVN TDSA
Sbjct: 186 VQRVPETESQGRVHTSACTVAVMAEVPEAEAIEINSADLKVDTFRASGAGGQHVNKTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTG++V    ++SQH+NR +AM VL ARL   E ++     ++ R+  +GSGDR
Sbjct: 246 IRITHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRDAAEASERRNLVGSGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGRITDHRINLTLY+L  V+ G +  I+ PL+  HQA ++ +  +
Sbjct: 306 SERIRTYNYPQGRITDHRINLTLYRLNEVVAGDLSCIVEPLMQEHQADLLAAMGD 360


>gi|325285304|ref|YP_004261094.1| peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
 gi|324320758|gb|ADY28223.1| Peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
          Length = 358

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 161/357 (45%), Positives = 231/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+   + +   +     Y++L  EY  +  +  K  +Y +     ++
Sbjct: 1   MIDKLNIVKQRFDEVSDLIIQPDIISDQKRYVELNREYKDLKKLCDKRELYLEFTNNIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            + +I D  SD+E+ ++A++++   +  +  LE EI  LL+PKD +D K+ ++E+RAGTG
Sbjct: 61  ANEIIAD-GSDAEMVEMAKMQLEEAKAGLPPLEEEIKLLLIPKDPEDSKNVVVEVRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y   + WK  V+  SD   GGYKEI   ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYTKYCESKGWKTNVIDLSDGTSGGYKEIQFEVTGDEVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA + DV I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQIDPKDVRIDFFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++     +KSQH+N+ +A +VLR+RLYD+E  +   E +A R  Q+ SG
Sbjct: 240 SAVRLTHVPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYDLELAKKQEEDAAKRNSQVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+ QGR+TDHRI LTLY L+ ++ G I  II+ L      + +  ASE
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLQNIINGDIQKIIDELRLVENTEKLKEASE 356


>gi|329113396|ref|ZP_08242177.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
 gi|326697221|gb|EGE48881.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
          Length = 352

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 250/355 (70%), Gaps = 5/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
               +++  + +R  E+E +++   + +A+ + + EYA I P++++I+     +   +  
Sbjct: 1   MKFDERLDQIVSRALELEAQLASGLNGEAFTQASREYAEIEPVVARINALRGVEDGIRQA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+++LA+ E+  + +++ +L+ ++   LLPKD  D +S ILE+R   GG
Sbjct: 61  ELLLA----DPEMKELAEAELTELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  +LF MY RYA L  W+  V+   +++ GG +E +A I+G+GVF+R+K+ESGV
Sbjct: 117 DEAALFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTS  TVAVLPEA ++DV++   D+R+D  RASG+GGQHVN T+S
Sbjct: 177 HRVQRVPATESQGRIHTSTVTVAVLPEAEDVDVEVNETDLRVDVFRASGAGGQHVNKTES 236

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH+P+GI+V+   EKSQH+NR +AMK+LRARLY+ ER +    R+A+R+ Q+G+GD
Sbjct: 237 AVRLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLYERERAQAHANRAADRRSQVGTGD 296

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLTLYK++ V+ G +D+ ++ L    QA ++ +  
Sbjct: 297 RSERIRTYNFPQGRVTDHRINLTLYKIDRVMLGELDEFVDALTQEEQAALLAAEG 351


>gi|328952115|ref|YP_004369449.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
 gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
          Length = 357

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 175/357 (49%), Positives = 259/357 (72%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++  ++NR+ E+E R+SE  ++     Y +   E+A +SP+I     + Q ++E  
Sbjct: 1   MLIERLHAIENRYLELEARLSEPETIKNQELYQQYAREHAELSPLIQIFRQHQQVERECD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++    +D EI++LA+ E+  +++ +  LENE+ +LLLPKD +D K+ +LEIRAGT
Sbjct: 61  NNQALLK-TETDEEIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMY R+A    WKVE+LS +    GG KEI+A ISG+ V+S +K+ES
Sbjct: 120 GGEEAALFAAELFRMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSLLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSA TVA+LPEA ++DV I  E++RID  R+SG GGQ VNTT
Sbjct: 180 GVHRVQRVPTTESQGRIHTSAVTVAILPEAEDVDVQISPEELRIDVFRSSGPGGQSVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V    EKSQH+N+ +A+KVL+ARL D++++    + + +RK Q+GS
Sbjct: 240 DSAVRITHLPTGMVVTCQDEKSQHKNKAKALKVLQARLLDIKQQEQHQKMAQDRKSQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHR+ LTLY+LE  L+G +D++++ L++ ++ + +   +
Sbjct: 300 GDRSERIRTYNFPQGRVTDHRLGLTLYRLEAFLEGGLDELLDALVSYYRTEALKQQA 356


>gi|225568388|ref|ZP_03777413.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
           15053]
 gi|225162616|gb|EEG75235.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
           15053]
          Length = 357

 Score =  282 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 252/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   + E   V+    + +L +E   ++PI+     Y   +Q  +D  
Sbjct: 3   DKLEDLLIRYEELMSELQEPDVVNNQERFRRLMKEQNDLAPIVEAYKEYKACRQAIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R+LA+ E+   +  + ELE+E+  LLLPKD +DDK+ ++EIRAG GG 
Sbjct: 63  LMLEEESD-EEMRELAKDELNESKARVEELEHELKILLLPKDPNDDKNVMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R+WK E++S S+N  GG+KE+V  I+G+G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYAEGRRWKTEIISISENGIGGFKEVVFMITGQGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTVTVAIMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++     +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLEMEKKQASEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL+KL+ VL G +D++I+ L+ A QA  + +  +
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDSVLNGDLDEVIDSLIAADQAAKLSNLQD 356


>gi|253688500|ref|YP_003017690.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585241|sp|C6DHY1|RF1_PECCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|251755078|gb|ACT13154.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 360

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + E   +   D +  L+ EYA ++ I      + Q ++++Q    
Sbjct: 8   KLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+RD+AQ E+   +  I  LE ++  LLLPKD DD++ C LE+RAGTGG E
Sbjct: 68  ML----DDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VEV+S+SD + GGYKE++A ISG GV+ ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+ E  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E ++   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDTLIQPVVQEYQADQLAALSE 358


>gi|147679165|ref|YP_001213380.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
 gi|189039982|sp|A5CYC3|RF1_PELTS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146275262|dbj|BAF61011.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
          Length = 349

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 170/344 (49%), Positives = 244/344 (70%), Gaps = 5/344 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  ++ ++ E+E  +     +     + +  + +A ++ I++    Y +  +E QD
Sbjct: 1   MIEKLDSIEKKYEELENLIGNPEIIADIARWQEYVKAHAELADIVAVYRDYKKVVKEIQD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D ++R++AQ E+  + ++   LEN +  LLLPKD +D+K+ ILEIRAGTG
Sbjct: 61  TIALMKEEP-DEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKNVILEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY RYA  + W+ E+L ++  D GG+KE+++ I G+GV+SRMKFESG
Sbjct: 120 GEEAALFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKGVYSRMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE+ GR+HTSAATVAVLPEA E+DV I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRIPTTESGGRIHTSAATVAVLPEAEEVDVQIDPDDLRIDVFCSSGHGGQSVNTTQ 239

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTGI+V+   EKSQH+N+ +AMKVLRARL D  ++    + ++ RK  +G+G
Sbjct: 240 SAVRITHIPTGIVVSMQDEKSQHKNKEKAMKVLRARLLDRVQQEHQQKIASTRKSMVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           DRSERIRTYNF Q R+TDHR+ LTL++L+ VL G +D+II+ L+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRVGLTLHRLDSVLDGDLDEIIDTLI 343


>gi|50121117|ref|YP_050284.1| peptide chain release factor 1 [Pectobacterium atrosepticum
           SCRI1043]
 gi|61214611|sp|Q6D551|RF1_ERWCT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49611643|emb|CAG75092.1| peptide chain release factor 1 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 360

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 249/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + E   +   D +  L+ EYA ++ I      + Q ++++Q    
Sbjct: 8   KLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+RD+AQ E+   +  I  LE E+  LLLPKD DD++ C LE+RAGTGG E
Sbjct: 68  ML----DDPEMRDMAQEELKEGKAAIEALEQELQVLLLPKDPDDERGCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VEV+S+SD + GGYKE++A ISG GV+ ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+    E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMAAVPEAELPDINPSDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDALIQPVVQEYQADQLAALSE 358


>gi|227513055|ref|ZP_03943104.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
 gi|227083630|gb|EEI18942.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
          Length = 361

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 241/353 (68%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E   +   ++  + Y +  ++  D  
Sbjct: 6   DKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+++  + + E+   + +  +LE+++  +LLPKD +D+K+ I+EI    GG 
Sbjct: 66  EMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E +LF  DLF MY +YA  + WKVEV+  S+ + GG+KEIV  I+G  V+S++K+E+G H
Sbjct: 126 EGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 186 RVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTSSA 245

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AMK+L+AR+YD   ++  ++ +A RK  IG+GDR
Sbjct: 246 VRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSAIGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +DDI++ L+ + QAK + + 
Sbjct: 306 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQAKKLENL 358


>gi|291561383|emb|CBL40182.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SS3/4]
          Length = 357

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 254/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+   + E+ L ++     +    + KL +E A ++PI+     Y Q KQ+ +D  
Sbjct: 3   DRLDDMLRHYEELMLELNNPSVAEDQRKFRKLMKEQADLAPIVDAYKQYKQAKQDVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+++LA+ E+   +K I ELE E+  LLLPKD +D+K+ I+EIRAG GG 
Sbjct: 63  ALL-DEESDEEMKELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  YA  + WK E+++ S++  GG KE+   I+G G +S++K+ESGVH
Sbjct: 122 EAALFASELYRMYVHYAESQHWKTEMINVSESGIGGMKEVEFMITGHGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA++PEA E DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAIMPEAEEFDVVIDDKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++ + +EKSQ QN+ +A ++LR++LYD+E +R  NE +A R+ QIG+GDR
Sbjct: 242 VRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELERRQNEEAAERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYK++ ++ G I ++I+ L+ A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLYKIDAIMDGDIQELIDSLIAADQAAKLAKMNE 356


>gi|306820801|ref|ZP_07454426.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551191|gb|EFM39157.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 357

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 177/355 (49%), Positives = 263/355 (74%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  +K +F+E+E ++S+   ++    + KL +E+A +SP++ K   Y +   + +   
Sbjct: 3   ENLGAVKEKFSELEKKISDPEIINNQEQWQKLMKEHADLSPVVKKYEEYLKANDDIKGAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + SD ++RDLA+ E+  +E+++ ++ +E+  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 63  EIIA-NESDEDLRDLAKEELSGLEEDLTKIIDELKILLLPKDPNDDKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFRMY  YAA R+WKVE++SS++ + GGYKE+V  I+G+G +SR+KFESGVH
Sbjct: 122 EAALFAGVLFRMYSMYAANRRWKVELMSSNETEIGGYKEVVFMITGKGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAVLPEA +++V++ L D+R+D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESQGRIHTSTVTVAVLPEAEDVEVNLDLNDVRVDVFRSSGNGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+++   EKSQ +N+ +A K+L+A+LYD+E ++   E ++ RK Q+G+GDR
Sbjct: 242 VRLTHIPTGIVISMQDEKSQLKNKDKAFKILKAKLYDMELEKKQKEMASQRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +ERIRTYN+ QGR+++HRI L LYKLE  L G +D+II+ L+T  QA  + S  E
Sbjct: 302 AERIRTYNYPQGRVSEHRIGLNLYKLESFLNGDLDEIIDALITTDQADKLNSLEE 356


>gi|300814565|ref|ZP_07094819.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511333|gb|EFK38579.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 358

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 164/352 (46%), Positives = 244/352 (69%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++   ++R+ E+E  + +   ++    Y K   E+A + PI+SK   Y + K+   D  
Sbjct: 3   EKLSVFEDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D +++DL + ++   EK + ++E ++  LL+PKD +D K+ ++EIRAG GG 
Sbjct: 63  ALLAEKLDD-DMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFR Y RYA    WKV+++S+++   GGYKE+V  I GRG +SR+K+ESGVH
Sbjct: 122 EAALFAGTLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++V+I   +I+ D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ  N+ +AMK+LRA+LYD++ +    + SA R  Q+G+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQNEKNSAQRLSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYN+ QGR+TDHRIN T ++++ +  G +D++I+ L  A Q K + +
Sbjct: 302 SERIRTYNYPQGRVTDHRINYTTHQIDSINDGELDELIDALTAADQIKKLEN 353


>gi|291524540|emb|CBK90127.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           rectale DSM 17629]
          Length = 358

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 170/354 (48%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL + + E+   +SE    +    + KL +E + ++PI+     Y + KQ  +D  
Sbjct: 3   DKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+R+LA+ E+   ++++ ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  AILNEE-SDEEMRELAKEELKDSKEQVEELEKELKILLLPKDPNDDKNVIVEIRAGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R WKVE L + +   GG K +   + G G +S +K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+ TS  +VAV+PEA ++DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LR +LYD+E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQDAEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +E+IRTYNF QGR+TDHRINLTLYKL+ +L G I +II+  + A QAK + +  
Sbjct: 302 AEKIRTYNFPQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQAKKLSNME 355


>gi|294635783|ref|ZP_06714243.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
 gi|291090883|gb|EFE23444.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
          Length = 360

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 248/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++  +   D +  L+ EY  ++ +      + Q + + +    
Sbjct: 8   KLEALQERHEEVQALLGDAGVIADQDRFRALSREYVQLTDVSRCFLDWRQAQDDLETAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+    + + ELE ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEEIKETRERLNELEQQLQILLLPKDPDDERNCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF GDLFRMY RYA  R+W++EV+S+S+ + GGYKE++A +SG G + R+KFESG HR
Sbjct: 124 AGLFAGDLFRMYSRYAEARRWRIEVMSASEGEHGGYKEVIAKVSGEGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +   I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQREEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDSLIEPIVQEYQADQLSALSE 358


>gi|311745348|ref|ZP_07719133.1| peptide chain release factor 1 [Algoriphagus sp. PR1]
 gi|126577889|gb|EAZ82109.1| peptide chain release factor 1 [Algoriphagus sp. PR1]
          Length = 358

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 168/356 (47%), Positives = 233/356 (65%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  LK RF E+   +        +  Y KLT+EY  +  I+S    Y    Q    
Sbjct: 1   MLDKLQALKERFEEVGQLIILPDSMADMSKYAKLTKEYKDLEKIVSAYDEYSLVLQNITS 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D E R++A++E+  +     ELE E+  LL+PKD +D K CILEIR G+G
Sbjct: 61  SKEML-DKEKDPEFREMAKLEIDELRSRKDELEEELKQLLIPKDPNDSKDCILEIRGGSG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMYER+  ++ WK+ VL  +    GGYKEI+AT+SG  V+  +K+ESG
Sbjct: 120 GDEASIFAGDLFRMYERFCEMQGWKLTVLDLTFGSAGGYKEIIATVSGADVYGMLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE+ GRVHTSAA+VAVLPE  E++V + + D+R DT  +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPATESQGRVHTSAASVAVLPEMDEVEVHLDMNDVRKDTYCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTG++V    EKSQ +N  +A+KVLR+RLY++E  +      A RK  +GSG
Sbjct: 240 SAVRLTHNPTGLVVTCQDEKSQIKNFEKALKVLRSRLYEIELAKHNESVGAQRKSMVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS++IRTYN+SQ R+TDHRIN T+Y L  V+ G+I++ I+ L  A   + + ++ 
Sbjct: 300 DRSDKIRTYNYSQSRVTDHRINKTVYNLPDVMDGHIEEFISALRLAENLEKMQNSG 355


>gi|296101959|ref|YP_003612105.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295056418|gb|ADF61156.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 360

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    E+E ++  LLLPKD DD+++  +E+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+++ + GG+KE++A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIVQEYQADQLAALSE 358


>gi|304415271|ref|ZP_07395967.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
 gi|304282877|gb|EFL91344.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
          Length = 360

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M F    ++  L+ R+ E+E  + ++  +     +  L+ EYA +  I      +D  ++
Sbjct: 1   MKFSIVTKLQALQERYEEVEAHLGDAEVISDQLRFRTLSREYAQLKDISLCFKQWDGLQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R+LAQ E+   +     LE ++  LLLP+D DD++ C LEIR
Sbjct: 61  DIETAKKML----DDLEMRELAQDELKEAKIRSEALEQKLQVLLLPQDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WK+EV++ ++ + GGYKE++  I+G GV+ ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAETRRWKMEVININEGEKGGYKEVITKITGNGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E +V +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPVLPETEVLEISDNDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A  VL AR+ + ER++    +++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRSRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDILIEPIVQEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|193214860|ref|YP_001996059.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
           35110]
 gi|238692722|sp|B3QYI4|RF1_CHLT3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193088337|gb|ACF13612.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
           35110]
          Length = 358

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 232/354 (65%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +K+R+ EIE ++S+   +   D + +L +EY+ +S I+     Y + K   Q   
Sbjct: 3   DQLQSIKDRYKEIEKQLSDPGVISNQDKFRQLNKEYSGLSEIVKAYDEYRKAKDALQQSK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    SD E+++LAQ +     +++ ELE ++  LLLPK+  D ++ ++EIRAG GG 
Sbjct: 63  ELL-YTESDPEMKELAQADYDEYSEKVPELEQQLKILLLPKEEADSRNAMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDN-DDGGYKEIVATISGRGVFSRMKFESGV 182
           EAALF  DL RMY+R+A    WK EVL  +++   GG+KE   ++SG  V+  MKFESGV
Sbjct: 122 EAALFAADLLRMYQRFAERNGWKCEVLDYNESSGLGGFKEATISLSGDDVYGTMKFESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GRVHTSAA+VAVLPEA + D++I  ED+++DT R+ G GGQ+VN  ++
Sbjct: 182 HRVQRVPETETQGRVHTSAASVAVLPEAEDFDIEIRKEDLQMDTYRSGGKGGQNVNKVET 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+P+GI+V    E+SQ QNR RAMK+LR++LYD++      ER+  R+  + +GD
Sbjct: 242 AVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKLAEQQKERADLRRSMVSTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           RS +IRTYNF Q R+TDHRI  T + L  +L G + +II  L    Q + + + 
Sbjct: 302 RSAKIRTYNFPQSRVTDHRIGFTTHALPQLLDGDLFEIIEALRVHDQTERLKAQ 355


>gi|298497806|ref|ZP_07007613.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
 gi|297542139|gb|EFH78189.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
          Length = 362

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GS DRS+RIRTYN+ QGR++DHRI LT+Y+L  V++G +  +I+P++  HQA  + + 
Sbjct: 299 LLGSRDRSDRIRTYNYPQGRVSDHRIILTVYRLTEVMEGDMQSLIDPVIHEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|227328865|ref|ZP_03832889.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 360

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + E   +   D +  L+ EYA ++ I      + Q ++++Q    
Sbjct: 8   KLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+RD+AQ E+   +  I  LE ++  LLLPKD DD++ C LE+RAGTGG E
Sbjct: 68  ML----DDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VEV+S+SD + GGYKE++A ISG GV+ ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAEARRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+ E  E ++ DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E ++   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDTLIQPVVQEYQADQLAALSE 358


>gi|291527966|emb|CBK93552.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           rectale M104/1]
          Length = 358

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL + + E+   +SE    +    + KL +E + ++PI+     Y + KQ  +D  
Sbjct: 3   DKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+R+LA+ E+   ++++ ELE ++  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  AIL-DEESDEEMRELAKEELKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R WKVE L + +   GG K +   + G G +S +K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+ TS  +VAV+PEA ++DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH P+GI++ + +EKSQ QN+ +A  +LR +LYD+E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPSGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQDAEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +E+IRTYNF QGR+TDHRINLTLYKL+ +L G I +II+  + A QAK + +  
Sbjct: 302 AEKIRTYNFPQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQAKKLSNME 355


>gi|299537972|ref|ZP_07051258.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1]
 gi|298726554|gb|EFI67143.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1]
          Length = 358

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 238/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+  +   +S+   V+   KL   ++E + I   +     Y   K++  D  
Sbjct: 3   DRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKSVKEQLVDTR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D ++ ++ + E   ++ +  ELE  +  LL+PKD +D+K+ I+EIR   GG 
Sbjct: 63  EML-DSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDLFRMY RYA  + WK++++ ++ N  GGYKE++  I+G+G +S+ KFE+G H
Sbjct: 122 EANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTS ATVA LPE  E+DV+I  +DIR+DT  +SG+GGQ VNTT SA
Sbjct: 182 RVQRVPATESQGRIHTSTATVACLPEVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V+   E+SQ +NR +AMK+LRAR+ D+  +    E  A RK  +GSGDR
Sbjct: 242 VRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQKEIDATRKSAVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   QA  +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGRLDEIIDALILEEQASKLERLND 356


>gi|90416952|ref|ZP_01224881.1| Peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2207]
 gi|90331299|gb|EAS46543.1| Peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2207]
          Length = 360

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 177/362 (48%), Positives = 250/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E+   +S+   +     +  L++EY+ +  ++     Y    +
Sbjct: 1   MKASILSKLDHLSERYEEVGALLSDGDIISDQNRFRTLSKEYSELELLVKTYGSYKDVME 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++ D  SD+++RD+AQ E+ + E+  + LE EI  LLLPKD  D K+  LEIR
Sbjct: 61  NIEEAKLLLKD--SDTDMRDMAQEEMRSGEERRQVLELEIQKLLLPKDPKDSKNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA   +WKVE++S +  D GGYKE++A I G+GV+S++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSKYAETNRWKVEIISENSGDHGGYKEVIARIVGQGVYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVA++     +  ++I   D+R+DT RASGSGGQH
Sbjct: 179 FESGAHRVQRVPDTESQGRVHTSACTVAIMAEADEQDAIEINKGDLRVDTFRASGSGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+TH+P+G++V    E+SQH+NR +AM VL+ARL  ++ + +A E+S  RK 
Sbjct: 239 VNKTDSAIRLTHLPSGLVVECQDERSQHKNRAKAMSVLQARLTAMQDEAVAKEQSDQRKN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL  V++G +DD++ PL+   QA+ + S 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLGEVMEGSLDDVLGPLVNEFQAEQLASL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|51891211|ref|YP_073902.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
           14863]
 gi|81610729|sp|Q67TD5|RF1_SYMTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51854900|dbj|BAD39058.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
           14863]
          Length = 356

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 156/356 (43%), Positives = 239/356 (67%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +  R+ ++  ++ +   ++    Y ++  E+  + PI+ K   Y + ++E  D
Sbjct: 1   MKQKLEGVVQRYEDLTYKLGDPSVINNPTEYRQVAREHNRLGPIVEKFRAYQKTERELDD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +  ++ +   D E R L   E+  ++++++ L +E+  LLLP+D +DDK+ I+EIRAG G
Sbjct: 61  VLEML-EGPLDPEERALFNQELRDLKEKLQTLSDELRILLLPRDPNDDKNVIMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  +LFRMY R A   KWK EVLS S+N+ GG KE++  I+  G +SR+K+E G
Sbjct: 120 GDEASLFAAELFRMYTRLAERHKWKTEVLSISENEAGGIKEVLFQINAEGAYSRLKYEGG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS  TVAV+PE  E+D++I  ED++I+  RA G+GGQHVN T+
Sbjct: 180 VHRVQRVPVTESQGRIHTSTVTVAVMPEMEEVDIEIKPEDLKIEVQRAGGAGGQHVNKTE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+V  + E+SQ QNR +A++VLRAR+ D   ++  +E    R+ Q+G+G
Sbjct: 240 SAVRMTHLPTGIVVYCADERSQMQNREKALRVLRARVADYYAQQAKSEEEQLRRAQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSE+IRTYNF Q R+TDHRI LT++ +  V+ G ID II+ L    QA ++    
Sbjct: 300 ERSEKIRTYNFPQDRVTDHRIGLTVHNIAAVMDGEIDHIIDALAQHEQAALLAREE 355


>gi|189502103|ref|YP_001957820.1| peptide chain release factor 1 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|238692309|sp|B3ES89|RF1_AMOA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189497544|gb|ACE06091.1| hypothetical protein Aasi_0702 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 159/356 (44%), Positives = 233/356 (65%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ ++ E+  ++ +   +     Y  L + Y  +S I+   ++Y       + 
Sbjct: 1   MIDKLEAIEKKYEEVSKQIVDPSIMADMKQYASLNKTYKELSKIVDVYTVYKSNLANLES 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             T++     D+  RDLA+ E+ ++E +  +LE ++ +LLLPKD +D K+ ILEIRAGTG
Sbjct: 61  AKTLLSIEK-DAAFRDLAKEEIDSLELQKTQLEEDLKFLLLPKDPNDSKNVILEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA +F GDLFRMY R+A   +WK+ ++   ++  GGYKEI+ +I+G G +  +K+ESG
Sbjct: 120 GDEAGIFAGDLFRMYSRFAEKMQWKLSIIEEVESTSGGYKEIICSIAGEGAYGMLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTSAA+V VLPE  E++VD+ + DIR DT  +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPATETQGRIHTSAASVVVLPEMDEVEVDLDMNDIRKDTFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+R+THIPTGI+V    EKSQ +N  +A+KVLRARLY+ E K+  +   A R+  + SG
Sbjct: 240 SAIRLTHIPTGIVVSCQDEKSQIKNLEKALKVLRARLYEQELKKQQDAIGAERRSMVKSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS++IRTYNF QGR+TDHRI  T++ L  V+ G + D+I  L  A  A+ +   +
Sbjct: 300 DRSDKIRTYNFPQGRVTDHRIGYTIHNLPAVMDGAVGDLIEALQLADNAERLQQGA 355


>gi|150388171|ref|YP_001318220.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
 gi|166977357|sp|A6TK43|RF1_ALKMQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149948033|gb|ABR46561.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
          Length = 357

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 160/355 (45%), Positives = 249/355 (70%), Gaps = 5/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L+ ++ ++  ++S+   ++    + KL +E++ I PI+ K   Y   +Q   +
Sbjct: 1   MLDKLAFLQEKYEDLGEKISDPEIINDQVQWQKLIKEHSEIEPIVMKYREYKTTQQALGE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D  +D+E++++A++EV  +E+ I E+E ++  +LLP D +DDK+ I+EIR G G
Sbjct: 61  TKEIMHDKATDAELKEMAKMEVEELEESIVEMEEQLKVMLLPTDPNDDKNVIVEIRGGAG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF   LFRMY RYA    WKVE++S +++  GGYKE++  I G+G +S++K+ESG
Sbjct: 121 GDEAGLFAAVLFRMYTRYAERSGWKVEMMSLNESGVGGYKEVIFMIKGKGAYSQLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HRVQR+P TE+ GR+HTS ATV ++PEA ++ +V+I   ++RID  R+SG+GGQ VNTT
Sbjct: 181 AHRVQRIPTTESGGRIHTSTATVVIMPEAEDVGEVNIDTNELRIDVFRSSGNGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V     KSQ +N+ +AMKVL++RL D   +    E S +R+ ++G+
Sbjct: 241 DSAVRITHLPTGLVVSCQDGKSQLKNKEKAMKVLKSRLLDQMIQEQDAEISQDRRSKVGT 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF QGR+TDHRIN+T+YKL+  L G I+++I+ L+T+ QA+ +  
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINVTVYKLDAFLDGEINEMIDSLITSAQAEKMQE 355


>gi|299132853|ref|ZP_07026048.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
 gi|298592990|gb|EFI53190.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
          Length = 358

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 194/348 (55%), Positives = 254/348 (72%), Gaps = 2/348 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L   ++  L  R A +E  +    S + Y++ T E A ISP++  +  Y     E  DL
Sbjct: 1   MLPDAKLDILLARHAALEAELMAQVSAETYVRATRELAEISPVVEAVKAYRAGASEIADL 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I D  +D+++R +A+ E   + +    LE +I   LLPKD  D+++ +LEIRAGTGG
Sbjct: 61  EAMIADPATDADMRAMAESERPVLLERQESLEQQIRVALLPKDAMDERNVVLEIRAGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF GDLFRMYER+AAL+ WKVEV+S+S+   GGYKEIVA + GRG F+++KFESGV
Sbjct: 121 DEASLFAGDLFRMYERFAALQGWKVEVMSASEGTMGGYKEIVAEVQGRGAFAKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEASGR+HTSAATVAVLPEA ++D+DI   D+RI+TMRA G+GGQHVN T+S
Sbjct: 181 HRVQRVPDTEASGRIHTSAATVAVLPEAEDVDIDIKDSDLRIETMRAQGAGGQHVNKTES 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITHIPTGI+V     +SQH+NR  AM +LR+R+ D ER+R A ERSA+R+ Q+GSGD
Sbjct: 241 AIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRVLDGERQRAAAERSADRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQ 348
           RSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++++ L T HQ
Sbjct: 301 RSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELVDALTTEHQ 348


>gi|300727227|ref|ZP_07060643.1| peptide chain release factor 1 [Prevotella bryantii B14]
 gi|299775465|gb|EFI72059.1| peptide chain release factor 1 [Prevotella bryantii B14]
          Length = 370

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 145/360 (40%), Positives = 221/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++RF E+   +++   +     ++KLT+EY  +S I+     Y       ++  
Sbjct: 9   EKLEGLESRFEEVSTLITDPSVIADQPRFVKLTKEYKDLSDIMDARKRYIACLNSIKEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD +++++A+ E+   E    +LE EI   L+PKD +D K+  +EIRAG GG 
Sbjct: 69  DILA-NESDPDMKEMAREELSENEALQPKLEEEIKIALVPKDPEDAKNVQMEIRAGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++Y   R W + + S+S+   GG+KEI   ISG  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKKYCDKRGWTLSITSTSEGAVGGFKEIDCAISGDNVYGVLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   +YD E ++  ++ S+ RK
Sbjct: 248 VRLRYPWKNPNTGEIEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYLDDISSRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  L G I D+I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNFPQGRVTDHRIGYTTHDLQGFLNGDIQDMIDALTVAENAEKMKE 367


>gi|332306089|ref|YP_004433940.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173418|gb|AEE22672.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 362

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 252/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  RF E++  +S+   +   D Y  LT+EY+ +  ++   + Y   +Q
Sbjct: 1   MKESVQRKLESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQSAQQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ +  SD E+R++AQ E  + +  I + E+E+  LLLPKD +D+ +C +EIR
Sbjct: 61  DFESAQEMMQE--SDPEMREMAQEEYKSSKLAIEQYEDELQILLLPKDPNDESNCFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  R+WKVEV++ ++ D GGYKE++A I G G +  +K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGILK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TV V+PE AE + +++   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVVVMPEVAESEAIEVNKADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR +AM VL++RL  +E ++   E ++ R+ 
Sbjct: 239 VNKTDSAIRITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNQLEEEKRQAEETSTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYNF QGR+TDHRINLTLY+L+ V+ G +D ++ P+   HQA ++ S 
Sbjct: 299 LVASGDRSERIRTYNFPQGRVTDHRINLTLYRLDDVVAGDLDAVLEPIRQEHQADLLASL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|188995885|ref|YP_001930137.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
           33277]
 gi|188595565|dbj|BAG34540.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
           33277]
          Length = 352

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 154/352 (43%), Positives = 226/352 (64%), Gaps = 5/352 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L++RF EI   +++   +     + KL++EY  +  I +    Y       ++    
Sbjct: 1   MDGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEEAKHT 60

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +    SD E+R++A+  +    + +  LE EI  LL+P + +DDK+ I+EIR GTGG EA
Sbjct: 61  MA-KESDEELREMAREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGGDEA 119

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF GDL+RMY +Y   + W+VEV   S+   GGYKEIV ++ G GV+  +K+ESGVHRV
Sbjct: 120 ALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGVHRV 179

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVPATE  GR+HTSAATVAVLPEA E+DV+I   DI + T R+ G+GGQ+VN  ++ V+
Sbjct: 180 QRVPATETQGRIHTSAATVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 239

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +TH PTG++V     +SQ  NR  AM++LR++LYD+E  +     +A RK  + +GDRS 
Sbjct: 240 LTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEAIAARRKTMVSTGDRSA 299

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +IRTYN+ QGR+TDHRIN+T+Y L  V+ G +   I+ L+ A   + +  A+
Sbjct: 300 KIRTYNYPQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAENVERMKEAA 351


>gi|227111330|ref|ZP_03824986.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 360

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + E   +   D +  L+ EYA ++ I      + Q ++++Q    
Sbjct: 8   KLEALQERHEEVQALLGEPSVIADMDRFRTLSREYAQLTDITGCFQQWQQAQEDQQTAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+RD+AQ E+   +  I  LE ++  LLLPKD DD++ C LE+RAGTGG E
Sbjct: 68  ML----DDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VEV+S+SD + GGYKE++A ISG GV+ ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+ E  E ++ DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E ++   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDTLIQPVVQEYQADQLAALSE 358


>gi|49531479|emb|CAG69191.1| peptide chain release factor 1 [Acinetobacter sp. ADP1]
          Length = 376

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++++  +     + KL+ E++ ++ I+   S Y Q ++
Sbjct: 15  MKESLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEE 74

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +   +++    SD + +D+AQ E+      I +LE ++N L++PKD +D  +  LE+R
Sbjct: 75  DIETAESML----SDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVR 130

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  R W++EVLS ++ + GGYKE++  + G GV+ R+K
Sbjct: 131 AGTGGDEAAIFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLK 190

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   +  V+I   D+RIDT RASG+GGQH
Sbjct: 191 FESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQH 250

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 251 INKTDSAVRITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQETATSEMRRD 310

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 311 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 370

Query: 356 SE 357
           ++
Sbjct: 371 AQ 372


>gi|268610024|ref|ZP_06143751.1| peptide chain release factor 1 [Ruminococcus flavefaciens FD-1]
          Length = 357

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 158/355 (44%), Positives = 244/355 (68%), Gaps = 4/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ ++ EI  ++S+   V     Y +L +EY  ++PII K   Y   + + ++  
Sbjct: 3   EKLAAMETKYNEISDKLSQPDIVSDNKLYTQLMKEYKNMTPIIEKYREYKSAQAQNEEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D + +++ Q E+   ++ +  +  E+  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 63  ELLDGGGLDRDFKEMVQAELEESKEAMENVTQELKILLLPKDPNDDKNVIIEIRGGAGGE 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF   L+RMY  YA  R WK EVLS++  + GG+KEI  +I G G +SR+K+ESGVH
Sbjct: 123 EASLFANSLYRMYTMYAEARGWKQEVLSANPTELGGFKEISFSIEGEGAYSRLKYESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAVL EA +++++I   D++ID  RASG+GGQH+N T+SA
Sbjct: 183 RVQRVPETESQGRIHTSTVTVAVLVEADDVELEINPTDLKIDYFRASGAGGQHINKTESA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRIT++PT ++V    E+SQH+N+ +AMK+LR+R+Y+  ++   ++ ++ R+ Q+G+GDR
Sbjct: 243 VRITYLPTNVVVECQDERSQHKNKDKAMKILRSRIYEAMQQEQNDKIASERRSQVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR+TDHRI LT+Y+LE +L G +D++ + L TA QA  + S  E
Sbjct: 303 SERIRTYNYPQGRLTDHRIGLTIYRLEDILNGNLDEVFDSLATADQAAKLASQEE 357


>gi|227524270|ref|ZP_03954319.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
 gi|227088501|gb|EEI23813.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
          Length = 361

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 241/353 (68%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E   +   ++  + Y +  ++  D  
Sbjct: 6   DKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+++  + + E+   + +  +LE+++  +LLPKD +D+K+ I+EI    GG 
Sbjct: 66  EMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E +LF  DLF MY +YA  + WKVEV+  S+ + GG+KEIV  I+G  V+S++K+E+G H
Sbjct: 126 EGSLFAVDLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 186 RVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTSSA 245

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AMK+L+AR+YD   ++  ++ +A RK  IG+GDR
Sbjct: 246 VRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSAIGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +DDI++ L+ + QAK + + 
Sbjct: 306 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQAKKLENL 358


>gi|227510126|ref|ZP_03940175.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190331|gb|EEI70398.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 357

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 151/352 (42%), Positives = 241/352 (68%), Gaps = 4/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E   +   ++  + Y +  ++  D  
Sbjct: 6   DKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+++  + + E+   + +  +LE+++  +LLPKD +D+K+ I+EI    GG 
Sbjct: 66  EMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E +LF  DLF MY +YA  + WKVEV+  S+ + GG+KEIV  I+G  V+S++K+E+G H
Sbjct: 126 EGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 186 RVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTSSA 245

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AMK+L+AR+YD   ++  ++ +A RK  IG+GDR
Sbjct: 246 VRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSAIGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +DDI++ L+ + QAK + +
Sbjct: 306 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQAKKLEN 357


>gi|258513428|ref|YP_003189650.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777133|gb|ACV61027.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 355

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 172/352 (48%), Positives = 242/352 (68%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ R+ E+   M +   +     + +  + +A +  I++    Y Q  QE  D  
Sbjct: 3   ERLQKIEERYEELGDLMGDPEVMADHSRWQQYVKAHADMQDIVNVYREYRQLDQEVSDAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D + R++ ++E+  + ++  EL  ++  LLLPKD +DDK+ ILE+RAGTGG 
Sbjct: 63  ELLKDK-LDEDFREMVELELEELSEKKEELVQKLKLLLLPKDPNDDKNVILEVRAGTGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA  + W+ EVL ++  D GG+KE+V  I G+G +SR+KFESGVH
Sbjct: 122 EAALFAGDLFRMYTRYAEKQGWRTEVLDANYTDIGGFKEVVCMIEGKGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTSAATVAVLPEA E+++DI   D+RID   ++G GGQ VNTT SA
Sbjct: 182 RVQRVPSTESGGRIHTSAATVAVLPEAEEVEIDINPNDLRIDVFCSTGPGGQSVNTTQSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+P+G++V    EKSQH+N+ +AM+VLRARL D+      +E ++ RK  +GSGDR
Sbjct: 242 VRITHLPSGLVVSCQDEKSQHKNKDKAMRVLRARLKDLAESEQRSELASTRKSMVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYNF Q RITDHRI LT +++  VL G +D+II  L+T  QA  + S
Sbjct: 302 SERIRTYNFPQNRITDHRIGLTTHRMPAVLMGEMDEIIEALITTDQADRLRS 353


>gi|94496666|ref|ZP_01303242.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
 gi|94424026|gb|EAT09051.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
          Length = 361

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 182/355 (51%), Positives = 258/355 (72%), Gaps = 3/355 (0%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +S ++I  ++ R  E++  M+ +    D +++L++EYA I P+ +      + +QE   L
Sbjct: 3   ISAERIAQIEARRDEVQASMTRADLAPDQFVRLSKEYAEIEPVAAAARELRRLRQELAAL 62

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             + G   +D  +RD+AQ E+  ++ ++   E  +   LLP+D  D +  +LEIRAGTGG
Sbjct: 63  EMMTGGEEADPAMRDMAQEEMQLLKSQLPAAERALALQLLPRDAADARPAMLEIRAGTGG 122

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMY+RYA  + WK+E+LS++ ++ GG+KE+VA+I+G GVF+++KFESGV
Sbjct: 123 DEAALFAGDLFRMYQRYADTQGWKMEMLSANASEQGGFKEVVASINGAGVFAKLKFESGV 182

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPE  E+DV I   D++ID  RASG+GGQHVNTTDS
Sbjct: 183 HRVQRVPVTESGGRIHTSAATVAVLPEPEEVDVQIADADLKIDIYRASGAGGQHVNTTDS 242

Query: 243 AVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+VT  + +SQH+N+ +AM+VLRARLY+ ER+R  NE++  RK  +GSGD
Sbjct: 243 AVRITHVPTGIVVTQQDERSQHKNKAKAMQVLRARLYEAERERTQNEQAGARKAMVGSGD 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           RSERIRTYNF QGR+TDHRINLTL++L  +L+G  + ++I+ L    +A  +   
Sbjct: 303 RSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLSEVIDALTAEDEAARLAQL 357


>gi|226315063|ref|YP_002774959.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
 gi|254790866|sp|C0Z828|RF1_BREBN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226098013|dbj|BAH46455.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
          Length = 358

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 165/351 (47%), Positives = 240/351 (68%), Gaps = 5/351 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++ RF E+   + +   +       +L++E +++   ++    Y     +  D   
Sbjct: 4   RLSAVEERFEEVTNLLCDPDVISDTKRLRELSKEQSSLEETVTTYREYKSVVSQIDDAKA 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E+R++ ++E+  +     +LE+ +  LLLPKD +D+K+ I+EIR   GG E
Sbjct: 64  MLEEKLDD-EMREMVKLELNELSARKEQLEDRLKILLLPKDPNDEKNVIVEIRGAAGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF   LFRMY R+A    +K+EVL +S  D GGYKEIV ++SGRG +S+MKFESG HR
Sbjct: 123 AALFAAVLFRMYTRFAERNAFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESGAHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+PATE+ GR+HTS ATV VLPEA +++V++  +DIRIDT  +SG+GGQ VNTT SAV
Sbjct: 183 VQRIPATESGGRIHTSTATVLVLPEAEDVEVEVHEKDIRIDTFCSSGAGGQSVNTTKSAV 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGIMV    EKSQH N+ +A++VLRARLYD   ++   E  A RK  +G+GDRS
Sbjct: 243 RVTHIPTGIMVSCQDEKSQHSNKDKALRVLRARLYDFYMQQQNAEADATRKSLVGTGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ERIRTYN+ Q R+TDHRI LTL++LE VL+G +D++I+ L+   Q +++ S
Sbjct: 303 ERIRTYNYPQSRVTDHRIGLTLHRLESVLEGEMDEVIDNLIMHEQTELLKS 353


>gi|153814377|ref|ZP_01967045.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
 gi|317500091|ref|ZP_07958326.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087685|ref|ZP_08336611.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848773|gb|EDK25691.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
 gi|316898576|gb|EFV20612.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409666|gb|EGG89102.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 356

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 249/354 (70%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   + E    D    + KL +E + ++PI+   + Y Q +Q  +D  
Sbjct: 3   DRLEDLLIRYEEVMGELQEPGVADDPVRFRKLMKEQSDLAPIVEAYNEYKQCRQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R+LA+ E+    K + ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  AMLEEESD-EEMRELAKEELSDSRKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R+WK E++S ++N  GG+KE V  I+G+G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAIMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++     +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQASEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF QGR+TDHRI LTL+KL+ +L G +D+II+ L+ A Q   +    
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQTAKLAKME 355


>gi|329770544|ref|ZP_08261922.1| peptide chain release factor 1 [Gemella sanguinis M325]
 gi|328836293|gb|EGF85962.1| peptide chain release factor 1 [Gemella sanguinis M325]
          Length = 362

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 235/353 (66%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  ++ R+ ++   +S+   V    KL   ++E  +I   +S    Y    Q+  D   
Sbjct: 6   QLEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVSVFREYKDIVQQINDTKE 65

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E++++ Q E+  +E  +  +E E+  LLLPKD +D K+ ++E+R   GG E
Sbjct: 66  LL-EIEDDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF GDL RMY R+A  + WKV+VL  S+   GG KE +  ISG  V+S+MKFESG HR
Sbjct: 125 AQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+SGR+HTS ATV VLPEA E++++I   DIR+DT  +SG+GGQ VNTT SAV
Sbjct: 185 VQRVPTTESSGRIHTSTATVVVLPEAEEVEIEINENDIRVDTFASSGAGGQSVNTTMSAV 244

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG++V+   E+SQ +N+ +AMKVLRAR+YD  ++    +  A RK ++G+GDRS
Sbjct: 245 RLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQEEQAKFDAERKSKVGTGDRS 304

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+++  L  A QA+ +   +
Sbjct: 305 ERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQAEKMAELN 357


>gi|261821677|ref|YP_003259783.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
 gi|261605690|gb|ACX88176.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
          Length = 360

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 177/355 (49%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + E   +   D +  L+ EYA ++ I      + Q ++++Q    
Sbjct: 8   KLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+RD+AQ E+   +  I  LE ++  LLLPKD DD++ C LE+RAGTGG E
Sbjct: 68  ML----DDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VEV+S+S+ + GGYKE++A ISG GV+ ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWRVEVVSASEGEHGGYKEVIAKISGDGVYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+ E  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRIRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDTLIQPVVQEYQADQLAALSE 358


>gi|215486443|ref|YP_002328874.1| peptide chain release factor 1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312966451|ref|ZP_07780673.1| peptide chain release factor 1 [Escherichia coli 2362-75]
 gi|254790880|sp|B7UQ99|RF1_ECO27 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|215264515|emb|CAS08882.1| peptide chain release factor RF-1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312288904|gb|EFR16802.1| peptide chain release factor 1 [Escherichia coli 2362-75]
          Length = 360

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 253/355 (71%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE +++ LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLHVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|255533998|ref|YP_003094370.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
 gi|255346982|gb|ACU06308.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
          Length = 357

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 146/356 (41%), Positives = 230/356 (64%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K R+ ++E ++S       +  +  L +EY  +  I+ +  +Y       + 
Sbjct: 1   MLEKLEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKVYKNVMSNIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D+E+R++A+ E+  +  +  ELE ++  +L+P D +D K+ + EIR GTG
Sbjct: 61  NKEILS-TEKDAEMREMAKEELDLLLVQQEELEEKVRLMLIPVDPEDAKNAVFEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY R+   + WKVE +  ++   GGYKE++  +SG  V+ ++K+ESG
Sbjct: 120 GDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAA+VAVLPEA EID+ I   DI + T R+ G+GGQ+VN  +
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVAVLPEAEEIDLYINPADIDLQTSRSGGAGGQNVNKVE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           + V++TH P+GI+V    E+SQ  NR+ AM++LR++LYD+E ++   + +A RK  + +G
Sbjct: 240 TKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKNGDIAARRKTMVSTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS +IRTYN+ QGR+TDHRI LTLY L  ++ G + ++I+ L  A  A+ +   +
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYNLNSIMDGGVQELIDALQFAENAEKLKEGA 355


>gi|149280703|ref|ZP_01886814.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
 gi|149228568|gb|EDM33976.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
          Length = 380

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 149/356 (41%), Positives = 232/356 (65%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K R+ ++E ++S       +  +  L +EY  +  I+ +  IY       + 
Sbjct: 24  MLEKLEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKIYKNVMSNIEA 83

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++  +  D+E+R++A+ E+  + K+  E+E ++  +L+P D +D K+ + EIR GTG
Sbjct: 84  NKEILS-NEKDAELREMAKEELDLLLKQQEEMEEKVRLMLIPVDPEDAKNAVFEIRGGTG 142

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY R+   + WKVE +  ++   GGYKE++  +SG  V+ ++K+ESG
Sbjct: 143 GDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYESG 202

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAA+VAVLPEA EID+ I   DI + T R+ G+GGQ+VN  +
Sbjct: 203 VHRVQRVPDTETQGRVHTSAASVAVLPEAEEIDLYINPADIDLQTSRSGGAGGQNVNKVE 262

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           + V++TH P+GI+V    E+SQ  NR+ AM++LR++LYD+E ++   + +A RK  + +G
Sbjct: 263 TKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKNGDIAARRKTMVSTG 322

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS +IRTYN+ QGR+TDHRI LTLY L  V+ G + ++I+ L  A  A+ +   S
Sbjct: 323 DRSAKIRTYNYPQGRVTDHRIGLTLYNLSGVMDGGVQELIDALQFAENAEKMKEGS 378


>gi|288554407|ref|YP_003426342.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
 gi|288545567|gb|ADC49450.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
          Length = 356

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 162/357 (45%), Positives = 238/357 (66%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +++R+  +   +S+   +    KL   ++E + I   +     Y +   + +D
Sbjct: 1   MLDRLQSVEDRYNRLNELLSDPDIISDSKKLREFSKEQSDIEETVQAYREYKEVVSQYKD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D E+  + + E+  +     ELE  +  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKAMLEDKLDD-EMYAMVKEEMDELSTRQEELEARLKILLLPKDPNDDKNVIVEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF GDL++MY R+A  + WK EV+ ++  + GGYKEI+ +++G G +S++K+E+G
Sbjct: 120 GDEAQLFAGDLYKMYSRFAEAQGWKTEVIEATSTELGGYKEIIFSVNGAGAYSKLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E++V+I  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPQTESGGRIHTSTATVAVLPEAEEVEVEIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG +V    EKSQ +N+ +AMKVLRAR+YD  ++ +  E   NRKL +G+G
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKVQREVQAEYDQNRKLAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF Q R+TDHRI LT+ KLE +LQG +D++I+ L+   QA+ + +A E
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTIQKLEQILQGKLDEVIDALIVEEQAEAMQNAEE 356


>gi|94971498|ref|YP_593546.1| peptide chain release factor 1 [Candidatus Koribacter versatilis
           Ellin345]
 gi|119361503|sp|Q1II28|RF1_ACIBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94553548|gb|ABF43472.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 359

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 245/353 (69%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ ++ E+   ++    V+    Y K  + +A ++ ++ K   Y    +  +D  
Sbjct: 3   ERLDLMEAKYDELTQALASPEIVNDSAKYQKTAKAHAELTQLVQKYREYKDLTRGIKDSR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D+E++  AQ E+  +E+ +  +E ++  LLLP+D +DDK+ I+EIRAGTGG 
Sbjct: 63  QMVAEE-TDAEMKAYAQQELTELEQRLHAVEEDLKVLLLPRDPNDDKNIIVEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  +LFRMY RYA  ++WKVEVLSSS++  GG KE++A I GRG +S++K+ESGVH
Sbjct: 122 EASLFAAELFRMYNRYAETQRWKVEVLSSSESGVGGLKEVIAIIEGRGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTSA TVAVLPEA E+D+ I  +DIRIDT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPQTETQGRVHTSAVTVAVLPEAEEVDIKIEAKDIRIDTFCSSGPGGQSVNTTYSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PT  +V    EKSQ +NR + M+VLRARLY+VE+++ A+  +  RK Q+GSGDR
Sbjct: 242 VRITHLPTNTVVSCQDEKSQIKNREKGMRVLRARLYEVEQQKQADALAKERKQQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SE+IRTYNF Q R+TDHRI  T+++L   + G I+ +I  L T +QA+ +   
Sbjct: 302 SEKIRTYNFPQNRVTDHRIGYTVHQLSEFMDGKINALIEALTTHYQAEKLKEQ 354


>gi|56421913|ref|YP_149231.1| peptide chain release factor 1 [Geobacillus kaustophilus HTA426]
 gi|261420783|ref|YP_003254465.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
 gi|297531578|ref|YP_003672853.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
 gi|319768453|ref|YP_004133954.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
 gi|61214572|sp|Q5KUH3|RF1_GEOKA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56381755|dbj|BAD77663.1| peptide chain release factor 1 (RF-1) in translation [Geobacillus
           kaustophilus HTA426]
 gi|261377240|gb|ACX79983.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
 gi|297254830|gb|ADI28276.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
 gi|317113319|gb|ADU95811.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
          Length = 358

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 237/355 (66%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ ++   + +   ++   KL   ++E A +   +     Y   +++  +  
Sbjct: 3   DRLEAVEQRYEKLNELLMDPDVINDPKKLRDYSKEQADLEETVQTYREYKSVREQLAEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   + E+R++ + E+  +E+    L  ++  LLLPKD +D+K+ I+EIRA  GG 
Sbjct: 63  AML-EEKLEPELREMVKEEIGELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK EV+ +S    GGYKEI+  I+G+G +S++KFE+G H
Sbjct: 122 EAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMINGKGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPE  EI+V+I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVACLPEMEEIEVEINEKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQEARAEYDQTRKQAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF Q R+TDHRI LT+ KL+ VL G++D+II  L+   QAK +  A++
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQVLDGHLDEIIEALILDDQAKKLEQAND 356


>gi|331082607|ref|ZP_08331730.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400226|gb|EGG79868.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 358

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 245/354 (69%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+  R  EI   ++E    +    + KL +E + + PI    + Y   K+  +D  
Sbjct: 3   DKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+R++ + E+   +K I ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  MML-DEESDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY +YA  + W+ E+LS ++N  GG+KE+   I+G+G +S++K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA EID ++ L D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAIMPEAEEIDFELDLNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A+KVLR+RLYD+E ++  +  +  R+ Q+G+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAEAEARRSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF QGR+TDHRI LTL+KL+ ++ G I ++I+ L+ A QA  +    
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDSIMNGDIQEVIDNLIAADQAIRLSGLE 355


>gi|260589191|ref|ZP_05855104.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
 gi|260540272|gb|EEX20841.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
          Length = 358

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 245/354 (69%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+  R  EI   ++E    +    + KL +E + + PI    + Y   K+  +D  
Sbjct: 3   DKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+R++ + E+   +K I ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  MML-DEESDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY +YA  + W+ E+LS ++N  GG+KE+   I+G+G +S++K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA EID ++ L D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAIMPEAEEIDFELDLNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A+KVLR+RLYD+E ++  +  +  R+ Q+G+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAEAEARRSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF QGR+TDHRI LTL+KL+ ++ G I +II+ L+ A QA  +    
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDSIMNGDIQEIIDNLIAADQAIRLSGLE 355


>gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
 gi|226739103|sp|B8E003|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
          Length = 367

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 177/355 (49%), Positives = 255/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ +++ RF EIE  +++   +   + Y  L +E A I  I+ K   Y +  +E++DL 
Sbjct: 8   DKLEEIEKRFEEIEGLLAKEDVISDFNKYQSLLKERAKIEEIVDKFREYKRLLKEKEDLE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D ++R LA+ E+  I++++ ++E E+  LLLPKD +D+K+ I+EIRAGTGG 
Sbjct: 68  EMVKEE-QDEDLRSLAETELEDIQEKLEKVEFELKALLLPKDPNDEKNIIMEIRAGTGGE 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY  YA  + WKVE++SS+    GG+KEI+  + G+G +SR+KFESGVH
Sbjct: 127 EAALFAADLFRMYLGYAQKKGWKVEIVSSNPTGLGGFKEIIFIVEGKGAYSRLKFESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPE  EI+V+I  +D+RI+T R+ G+GGQHVN T+S 
Sbjct: 187 RVQRVPITESSGRIHTSTATVAVLPEMEEIEVEIDPKDLRIETFRSGGAGGQHVNKTESG 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIP+GI+V    E+SQHQNR +AMKVLRARLY+  ++   NE ++ R+ Q+G+G+R
Sbjct: 247 VRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYYQREKENEIASQRRQQVGTGER 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF Q R+TDHRIN + ++LE VL G +D+ I+ L+ A + + I    E
Sbjct: 307 SEKIRTYNFPQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEKEEQIKKLFE 361


>gi|164688895|ref|ZP_02212923.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
           16795]
 gi|164602099|gb|EDQ95564.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
           16795]
          Length = 354

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L++++ E+  ++S+   ++    + K  +E+A + PI+ K   Y +     ++
Sbjct: 1   MLNKLQVLEDKYKELTEKISDIEVINDQKTWQKYMKEHADLEPIVMKYREYKEVVDNIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ + + +              E  +  +E+E+  LLLPKD +D+K+ I+EIR G G
Sbjct: 61  SKEILEEESDEELRELAKMELSDL-ESRVEPIEDELKILLLPKDPNDEKNVIVEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLFRMY RYA  R+WK E+LS+SD   GGYKE+   I G+G +SR+K+ESG
Sbjct: 120 GDEAALFAGDLFRMYSRYAERRRWKTELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P+TE+ GR+HTS ATVAVLPE  +++++I   D+RID  RASG+GGQ VNTTD
Sbjct: 180 VHRVQRIPSTESGGRIHTSTATVAVLPEVEDVEIEINPNDLRIDVFRASGNGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG +V    EKSQ +N+ +AMKVL+ARLYD       ++ +A R+ Q+G+G
Sbjct: 240 SAVRITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQHDDIAAERRSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGR++DHRINLTLYKLE  L G +D++I+ L+T  Q K + +
Sbjct: 300 DRSERIRTYNFPQGRVSDHRINLTLYKLESFLDGDLDEMIDALITEDQTKKMSA 353


>gi|161349962|ref|YP_047013.2| peptide chain release factor 1 [Acinetobacter sp. ADP1]
 gi|61214614|sp|Q6F9S2|RF1_ACIAD RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 362

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++++  +     + KL+ E++ ++ I+   S Y Q ++
Sbjct: 1   MKESLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +   +++    SD + +D+AQ E+      I +LE ++N L++PKD +D  +  LE+R
Sbjct: 61  DIETAESML----SDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  R W++EVLS ++ + GGYKE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   +  V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQETATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|255319517|ref|ZP_05360731.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
 gi|262378460|ref|ZP_06071617.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
 gi|255303457|gb|EET82660.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
 gi|262299745|gb|EEY87657.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
          Length = 362

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 165/362 (45%), Positives = 244/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R+ E+   ++++  +     + KL+ E++ ++ I    + Y Q + 
Sbjct: 1   MKESLRLRLDQLSDRYEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWAKYRQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++    SD + +++AQ E+      I  LE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEAML----SDPDFKEMAQEEIRENRALIESLESQLNILMIPKDPNDANAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA    W++E+LS ++ + GGYKEI+  + G GV+ RMK
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAESCGWRLEILSENEGEHGGYKEIICRVDGDGVYGRMK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   +  VDI   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R    +  S  R+ 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMSLLVSRLENAKRAAQESATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G ++++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLNELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|319951972|ref|YP_004163239.1| bacterial peptide chain release factor 1 (brf-1) [Cellulophaga
           algicola DSM 14237]
 gi|319420632|gb|ADV47741.1| bacterial peptide chain release factor 1 (bRF-1) [Cellulophaga
           algicola DSM 14237]
          Length = 372

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 162/358 (45%), Positives = 234/358 (65%), Gaps = 5/358 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  +K RF E+   + +   +     Y++L +EY  +  ++ K  +Y +     +
Sbjct: 14  VMLDKLNIVKQRFDEVSDLIIQPDVISDQKRYVELNKEYKDLKSLVDKRDLYIEFTNNVE 73

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   +I D  SD+E+ ++A++++   +  + +LE EI  LL+PKD +D K+ ++E+RAGT
Sbjct: 74  EAQEIISD-GSDAEMVEMAKMQLEEAKVGLPKLEEEIKVLLIPKDPEDSKNVVVEVRAGT 132

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA++F GDLFRMY +Y   + WK  V+  S+   GGYKEI   ++G  V+  +KFE+
Sbjct: 133 GGDEASIFAGDLFRMYTKYCESKGWKTNVIDLSEGTSGGYKEIQFEVTGDNVYGTLKFEA 192

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GRVHTSAATV VLPEA + DV I  +D+RID   +SG GGQ VNTT
Sbjct: 193 GVHRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQIEPKDVRIDFFCSSGPGGQSVNTT 252

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
            SAVR+THIP+G++     +KSQH+N+ +A KVLR+RLYD E  +   E +A R  Q+ S
Sbjct: 253 YSAVRLTHIPSGLVAQCQDQKSQHKNKEKAFKVLRSRLYDQELAKKQEEDAAKRNSQVSS 312

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRS +IRTYN+SQGR+TDHRI LTLY L+ ++ G I  II+ L      + +  ASE
Sbjct: 313 GDRSAKIRTYNYSQGRVTDHRIGLTLYDLQNIMNGDIQRIIDELSLVENTEKLKEASE 370


>gi|154252199|ref|YP_001413023.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
 gi|171769599|sp|A7HTY3|RF1_PARL1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154156149|gb|ABS63366.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
          Length = 355

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 183/357 (51%), Positives = 264/357 (73%), Gaps = 6/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +  +++  +  RF  ++  M+     D ++ L++E++ + P+ + I     +++E  D 
Sbjct: 1   MIPEERLQSVIARFEAVQSEMNSDVPRDRFVALSKEFSELEPVAAAIGHLLARRREYADA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++       ++ ++A+ E+  + +E+  LE+E+  +LLPKD  DD++ ILE+RAGTGG
Sbjct: 61  EQLLR----VRDMAEMAKEEIARLNEELPRLEHEVQLMLLPKDAADDRNVILEVRAGTGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMYERYA+ + WKVE++++S+ + GGYKEI+A ISG GV++++KFESGV
Sbjct: 117 DEAALFAGDLFRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAATVAVLPEA E+DV+I  +D+RID  RASG+GGQHVN T+S
Sbjct: 177 HRVQRVPVTEGGGRIHTSAATVAVLPEAEEVDVEIEDKDLRIDVYRASGAGGQHVNKTES 236

Query: 243 AVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V   + KSQH+N+ RAM++LRAR++D ER+R+  ERSA RK Q+GSGD
Sbjct: 237 AVRITHLPTGIVVAQQDEKSQHKNKARAMQILRARIFDAERERLDRERSAARKGQVGSGD 296

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF Q R+TDHRINLTL+KL+ VL+G  + ++I+ L+   QA  + +  +
Sbjct: 297 RSERIRTYNFPQSRVTDHRINLTLHKLDQVLEGEALGELIDALIAEDQAARLAAMGD 353


>gi|237731780|ref|ZP_04562261.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
 gi|226907319|gb|EEH93237.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
          Length = 360

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++   D +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAGTIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE  +  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GG+KE++A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  R     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIVQEYQADQLAALSE 358


>gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99]
 gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99]
          Length = 361

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 161/362 (44%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S+   +     +  L++EY+ +  +++    + Q  +
Sbjct: 1   MKDSVIRKLEGLLERNEEVLALLSDPGIIADQTRFRALSKEYSQLEDVVAAFKGFQQATE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ +  +D EI+ +AQ E+   +  I++LE+E+  LLLPKD +DD +  +EIR
Sbjct: 61  DLDAAKEMLSE--NDPEIKQMAQEEMKEAKSLIKKLEDELQILLLPKDPNDDNNAFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDL+RMY RY    +W+ E++++++ + GG+KEI+  +SG GV+ R+K
Sbjct: 119 AGAGGDEAAIFAGDLYRMYSRYFESNRWQTEIMNANEGEHGGFKEIIIKVSGEGVYGRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVL E  E +       D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVLVEVPEAEAIKINPADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+THIP+GI+V    ++SQH+NR +AM VL AR+  VE ++  +     R+ 
Sbjct: 239 VNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSVEETTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR++DHRINLTLY+L  +++G +D +I PL+  +QA M+ + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVSDHRINLTLYRLNEIMEGELDVLIVPLMQENQADMLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|260062127|ref|YP_003195207.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501]
 gi|88783689|gb|EAR14860.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501]
          Length = 358

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 165/357 (46%), Positives = 228/357 (63%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+   + +   +     YI+L +EY  +  I+     Y Q +    +
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDIIADQKRYIQLNKEYKDLKEIVDMREKYIQLQNRISE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D  SD E+ ++A++++    + I  LE+ I   L+PKD +D K  ++EIRAGTG
Sbjct: 61  AEEILSD-GSDPEMAEMAKLQLEEAREAIPPLEDAIKMKLIPKDPEDAKDVVMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y   R WK  V+  S+   GG+KEI   +SG  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGFKEIHFEVSGEDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA + DV I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQIDPKDVRIDYFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+     EKSQH+N+ +A KVLR+RLYD+E  +   E +A R  Q+ SG
Sbjct: 240 SAVRLTHVPTGIVAQCQDEKSQHKNKDKAFKVLRSRLYDMELAKKQEEDAAKRNSQVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+ QGR+TDHRI LTLY L+ ++ G I  II+ L+     + +  ASE
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLQNIINGDIQKIIDELMLVENTEKLREASE 356


>gi|258592988|emb|CBE69299.1| peptide chain release factor 1 [NC10 bacterium 'Dutch sediment']
          Length = 358

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +++  ++ R  E+ L+M +   +     + +L + +A + P++     Y +  Q+ ++ 
Sbjct: 5   RERLDAIEQRSTEVLLQMGDPAIITDQARFQRLAKAHAELEPVVEAYQQYRKLLQDLEET 64

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D   D ++R+LA+ E+  +  +  +LE E+  LLLP+D  D+KS ILE+RAG GG
Sbjct: 65  KALLHDGTED-DVRELAEAELKELAVKREKLEEELTLLLLPRDPADEKSIILEVRAGAGG 123

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  +L RMY RYA LR WKVE+LSSS    GG KE + +I GRG +SR+KFESGV
Sbjct: 124 DEAALFAAELVRMYGRYAELRGWKVEMLSSSQTGVGGVKEAILSIEGRGAYSRLKFESGV 183

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+SGR+HTS  TVAVLPEA ++++ I  +D+RID  R++G GGQ VNTTDS
Sbjct: 184 HRVQRVPVTESSGRIHTSTVTVAVLPEAEDVEIQIDPKDLRIDVFRSTGPGGQSVNTTDS 243

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG++V    EKSQH+NR +AMKVLRARL +    + A E S  R+ Q+G+GD
Sbjct: 244 AVRITHLPTGMVVSCQDEKSQHKNRAKAMKVLRARLLEAATAQQAAEISQARRQQVGTGD 303

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           RSERIRTYNF QGR+TDHRI LTL+ L  +L+G I+++I  L  + QA  + + 
Sbjct: 304 RSERIRTYNFPQGRVTDHRIGLTLHSLPRILEGEIEELIGALAASDQAARLKAL 357


>gi|94500021|ref|ZP_01306556.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
 gi|94427879|gb|EAT12854.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
          Length = 363

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 182/361 (50%), Positives = 252/361 (69%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ EI   +S++  +   + + +L++EYA I P++   + Y Q ++
Sbjct: 1   MKESVKVKLQTLDERYEEIGHLLSDAGVISDQNKFRELSKEYAEIEPVVKAFAQYTQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   +  D   D ++R++ Q E  A ++EI  L+ E+  LLLPKD +D K+ ILEIR
Sbjct: 61  NLAEAEALAKD--DDPDMREMGQEEYSAAKEEIERLDGELQILLLPKDPNDGKNVILEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R WK EV+S+++ + GGYKE++  I+G GV+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYTRYAEKRGWKCEVMSANEGEHGGYKEVITRIAGDGVYGQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PE    D  DI   D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEIENEDDVDINKADLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM +L  RL D   ++   E++A RK 
Sbjct: 239 VNKTDSAIRITHLPTGLVVECQEERSQHKNRAKAMSILATRLNDAVVQKAQAEQAAERKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR++DHRINLT+YKL+ ++QG +D II PLL  HQA+++ S 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVSDHRINLTVYKLDELMQGDVDMIIQPLLQEHQAELLASM 358

Query: 356 S 356
            
Sbjct: 359 G 359


>gi|299144121|ref|ZP_07037201.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518606|gb|EFI42345.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 356

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 247/352 (70%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +     ++ E+E ++ +   ++    Y K+  E+A I P++ K   Y       +D  
Sbjct: 3   ENLQVFDEKYIELEQKLMDINVINDSKLYQKIAIEHAEIEPVVLKYREYKTLISNLEDNK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ ++  D ++RDL + ++   E++I  LE+EI  LL+PKD +D K+ I+EIRAG GG 
Sbjct: 63  EMLNENLDD-DMRDLIKEDIKDSEEKISVLEDEIKILLIPKDPNDSKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFR Y R+A    WKVE++S+++   GGYKE++  I GRG +SR+K+ESGVH
Sbjct: 122 EAALFAGVLFRQYVRFAERMGWKVEIMSTNEIGIGGYKEVIFMILGRGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPEA ++++DI   DI+ D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESSGRIHTSTATVAVLPEAEDVEIDIEPSDIKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +AMK+L+ +LYD++ +    E S  +K QIG+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLRNKEKAMKILKTKLYDLKLQEQNAELSMQKKSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYN+ QGR+TDHRI LTL+K++ ++ G +D+II+ L+ + QA  I +
Sbjct: 302 SERIRTYNYPQGRVTDHRIGLTLHKIDSIVDGDLDEIIDALIASDQASKIEN 353


>gi|91974579|ref|YP_567238.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB5]
 gi|119361592|sp|Q13F02|RF1_RHOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91681035|gb|ABE37337.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB5]
          Length = 361

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 186/358 (51%), Positives = 257/358 (71%), Gaps = 2/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E ++        Y+++T E + ++P++  +  Y + + E  
Sbjct: 1   MSKLPEAKLDVLLAHHASLEAQLLGEVGASEYVRITRELSELNPLVEAVKAYREVRDELG 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  ++ D ++DSE+R +A+ E  A++    EL  EI   LLPKD  D+++ +LEIRAGT
Sbjct: 61  DVDALLEDPDTDSEMRAMAEAERDALDAHRAELIQEIRVALLPKDAMDERNVMLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYE++AAL+ W VEV+S+S+   GG+KEI+A + GRG F+++KFES
Sbjct: 121 GGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGSMGGFKEIIAEVKGRGAFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  E+DVDI  +D++IDTMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKADDLKIDTMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITH+PTGI+V     +SQH+NR  AM +LR+R+YD E++R+   RSA RK ++GS
Sbjct: 241 ESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLDAARSAERKEKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQA  + +  
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQAAQLAAQG 358


>gi|154482489|ref|ZP_02024937.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC
           27560]
 gi|149736690|gb|EDM52576.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC
           27560]
          Length = 356

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 254/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +  R+ EI  ++++   V   + + KL +E + ++PI+     Y + KQ  +D  
Sbjct: 3   DKLDGILERYDEIMEQLNDPNVVSDQNNFRKLMKEQSDLAPIVEAYKAYKEAKQTVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I D  SD E+R+LA+ E+   +++I ELE ++  LLLPKD +DDK+ ++EIR G GG 
Sbjct: 63  -MILDEESDEEMRELAKEEMNEAKEQITELEEKLKILLLPKDENDDKNVVVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  YA  + WK E++S ++N  GG+KE+V  I+G+G +S++K+ESGVH
Sbjct: 122 EAALFAAELYRMYCMYAETQHWKTEMISVNENGLGGFKEVVFMINGQGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GR+HTS ATVA++PEA E+DV+I + D R D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPVTESGGRIHTSTATVAIMPEAEEVDVEIDMNDCRFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A+KVLRARLY++E ++  +  S  R+ QIG+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKALKVLRARLYELECQKKQDAESEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI  T ++L+ +L G++++II+  + A QA  + + ++
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKFTSHRLDEILNGHLEEIIDNCIAADQAAKLSNMND 356


>gi|330828702|ref|YP_004391654.1| peptide chain release factor 1 [Aeromonas veronii B565]
 gi|328803838|gb|AEB49037.1| Peptide chain release factor 1 [Aeromonas veronii B565]
          Length = 362

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 240/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  + E   V   D Y  LT EYA +  I+     Y Q + 
Sbjct: 1   MNPSLIRKLEGLIERHEEVQAMLGEPDVVSDQDRYRALTREYAQLEDIVHAFQRYRQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D+++R++AQ E+   +  +  LE E+  +LLPKD  DD +C LEIR
Sbjct: 61  DLETTQMML--EEDDADLREMAQEELPLAKANLEALEQELQLMLLPKDPKDDNNCYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY R+A  + W+V ++S +D + GGYKE++A I G  V+ R+K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRFAERQGWRVSIVSCNDGEYGGYKEVIAKIDGERVYGRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPE  E   ++I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM VL ARL   E +R      + R+ 
Sbjct: 239 VNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+++HRINLTLY+L  +L+G +D +I PL+  +QA  + S 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLSEILEGDLDCVITPLVQEYQADQLASL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|327441448|dbj|BAK17813.1| protein chain release factor A [Solibacillus silvestris StLB046]
          Length = 358

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 157/355 (44%), Positives = 238/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+  +   +S+   V    KL   ++E + I  ++    +Y   K++  D  
Sbjct: 3   DRLQAVEDRYERLNELLSDPDIVSDSNKLREYSKEQSDIQEMVDVYRVYKSVKEQLADTR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+ ++ + E   + K++ ELE  +  LL+PKD +D K+ I+EIR   GG 
Sbjct: 63  ELM-EIEKDAEMLEMMKEEFNDLNKQVPELEERLRILLIPKDPNDSKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDLFRMY RYA  + WKV+V+ ++ N  GGYKE++  I+G+G +S+ K+E+G H
Sbjct: 122 EANIFAGDLFRMYTRYAETQGWKVDVMEATPNPAGGYKEVILMINGQGAYSKFKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTS ATVA LPE    DV+I  +DIR+DT  +SG+GGQ VNTT SA
Sbjct: 182 RVQRVPATESQGRIHTSTATVACLPEVHVEDVEIHEKDIRVDTFASSGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V+   E+SQ +NR +AMK+L AR+ D  R+    E  A RK  +G+GDR
Sbjct: 242 VRMTHLPTGVVVSMQDERSQIKNREKAMKILVARVADKHRQEAQAEIDATRKTAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   QA  + + +E
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALILDEQATRLSNLNE 356


>gi|291617195|ref|YP_003519937.1| PrfA [Pantoea ananatis LMG 20103]
 gi|291152225|gb|ADD76809.1| PrfA [Pantoea ananatis LMG 20103]
 gi|327393650|dbj|BAK11072.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355]
          Length = 360

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 164/361 (45%), Positives = 246/361 (68%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+E  + ++  +   D +  L+ EYA ++ +      + Q + 
Sbjct: 1   MKTSIVAKLEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVTRCFRDWQQNQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+RD+AQ E+L   ++   LE ++  LLLPKD DD++ C +E+R
Sbjct: 61  DIETAKMLL----DDPEMRDMAQEELLEAREKSESLEQQLQLLLLPKDPDDERDCFVEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A + G G + R K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYSRYAESRRWRVEIVSANEGEHGGYKEVIARVMGEGAYGRFK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRHEAEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYNF QGR+TDHRINLT+Y+L+  ++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRIRTYNFPQGRVTDHRINLTIYRLDETMEGKLDSLIEPIVQEYQADQLAAL 356

Query: 356 S 356
           +
Sbjct: 357 A 357


>gi|291520820|emb|CBK79113.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus catus
           GD/7]
          Length = 357

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 251/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+  R+ +I   +++   V+    + KL +E + + P++ K + Y   KQ  +D  
Sbjct: 3   DRLDDILIRYQQIMEELNDPDVVNDQKHFRKLMKEQSDLQPLVEKYTEYKNTKQTIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E++++ + E+   +  I ++E E+  LL+PKD  D+K+ I+EIRAG GG 
Sbjct: 63  EML-EVEDDEEMKEMLKEELSEAKSNIAKIEQELKVLLIPKDPMDEKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +LFRMY +YA  ++WK+E++  S+N  GG+KE V  +SG  V+SRMKFESGVH
Sbjct: 122 EAALFAAELFRMYSKYAESKRWKIEMMDVSENGIGGFKECVFMVSGDHVYSRMKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA E+DV+I + D+RID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTVTVAIMPEAEEVDVEIDMNDVRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++L ++E ++   E +A RK Q+G+GDR
Sbjct: 242 VRLTHNPTGIVIYSQTEKSQLQNKEKAFRLLRSKLLEIEIEKKHAEEAALRKNQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR T+HRI LTLY+L  ++ G +D+II+ L+ A QA  + +  +
Sbjct: 302 SEKIRTYNFPQGRCTEHRIKLTLYRLGDIMNGDLDEIIDSLIAADQAAKLANMED 356


>gi|109898878|ref|YP_662133.1| peptide chain release factor 1 [Pseudoalteromonas atlantica T6c]
 gi|119361579|sp|Q15SQ9|RF1_PSEA6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109701159|gb|ABG41079.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudoalteromonas
           atlantica T6c]
          Length = 362

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 251/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  RF E++  +S+   +   D Y  LT+EY+ +  ++   + Y   + 
Sbjct: 1   MKESVQRKLESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQGAQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ +  SD E+R++AQ E  + ++ I + E+E+  LLLPKD +D+ +C +EIR
Sbjct: 61  DFESAQEMMQE--SDPEMREMAQEEYKSSKQAIEQYEDELQILLLPKDPNDESNCFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  R+WKVEV++ ++ D GGYKE++A I G G +  +K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TV V+PE  E + +++   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVVVMPEVPESEAIEVNKADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR +AM VL++RL  +E ++   E ++ R+ 
Sbjct: 239 VNKTDSAIRITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNKLEEEKRQAEETSTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYNF QGR+TDHRINLTLY+L+ V+ G +D ++ P+   HQA ++ S 
Sbjct: 299 LVASGDRSERIRTYNFPQGRVTDHRINLTLYRLDDVVAGDLDAVLEPIRQEHQADLLASL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|182415309|ref|YP_001820375.1| peptide chain release factor 1 [Opitutus terrae PB90-1]
 gi|177842523|gb|ACB76775.1| peptide chain release factor 1 [Opitutus terrae PB90-1]
          Length = 383

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 226/352 (64%), Gaps = 4/352 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   + R  E++ +M+E        +    + E   +  +++    YD+  +E  +   
Sbjct: 14  DLAPFQRRLDELDAQMAEPTFYANARRAAEVSREQQKLQQLVADYQEYDRLGREAAEAAA 73

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D  +D ++R+LAQ E+  +E+    L   +   ++P D  D ++ ++EIRAGTGG E
Sbjct: 74  LGKDPAADPDLRELAQAELPELERRRAALRQAVLLAMIPPDPTDSRNTVMEIRAGTGGDE 133

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF  DLFRMY RYA  + WK++ +SSS ++ GG+KE++  ISG  V+ R+KFESGVHR
Sbjct: 134 ASLFAADLFRMYSRYADGQGWKIQPMSSSMSERGGFKEVIFLISGTDVYKRLKFESGVHR 193

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA+GR+HTS  TVAVLPEA E+DV I  +++ I   RASG GGQ VNTTDSAV
Sbjct: 194 VQRVPVTEANGRIHTSTVTVAVLPEAEEVDVQIDPQELEITVTRASGPGGQGVNTTDSAV 253

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           +I H PTG++V  + E+SQ +N+ +A+ VLR+RL     +    + +A R+ QIGSGDRS
Sbjct: 254 QIVHKPTGLIVTCADERSQIKNKAKALTVLRSRLLQRREEEERAKYAATRRSQIGSGDRS 313

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           ERIRTYNF Q R+TDHRI LTLY L  VL+G ID II  L  A   + + + 
Sbjct: 314 ERIRTYNFPQNRLTDHRIGLTLYNLPQVLEGGIDPIIAALHKADYEEKLAAL 365


>gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
 gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
          Length = 361

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 180/362 (49%), Positives = 253/362 (69%), Gaps = 8/362 (2%)

Query: 1   MVFLSHKQ--ICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQK 55
           M      +  + +++ RF  +E  +++   V   + ++K ++E+A +S ++     Y++ 
Sbjct: 1   MAMSPDLKARLEEVEARFNAVERELADPNIVANQENFMKRSKEHAELSQLVECFRSYNKY 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           +QE +    ++ D   D E+  LA +EV   E  + +LE  +  LLLP+D  D+K+ +LE
Sbjct: 61  EQELEQNRLLMAD--DDEELAALAGVEVEQAETALVDLEQRMRLLLLPQDPRDEKNVVLE 118

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           IRAGTGG EAALF  +L RMY RYA L++WK E+LS    + GG+KE++A I+GRG +S+
Sbjct: 119 IRAGTGGDEAALFAAELLRMYLRYAELKRWKTEILSQHPTNAGGFKEVIALITGRGAYSQ 178

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           +K+ESG HRVQRVPATE+ GRVHTSA TVAVLPEA E++VDI  E++RID  R+SG GGQ
Sbjct: 179 LKYESGAHRVQRVPATESQGRVHTSAVTVAVLPEADEVEVDIKPEELRIDYFRSSGPGGQ 238

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTTDSAVRITH+PTG++V    EKSQH+N+ +A+KVL ARL +   +      +ANR+
Sbjct: 239 HVNTTDSAVRITHLPTGLVVSCQDEKSQHKNKAKALKVLAARLLEKMEQEQQAALAANRR 298

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            Q+GSGDRSERIRTYNF QGR+TDHRI LT+YKLE VL G ++ II  L+   QA+ + S
Sbjct: 299 SQVGSGDRSERIRTYNFPQGRVTDHRIGLTIYKLEEVLVGELELIIPHLVAYFQAEALKS 358

Query: 355 AS 356
           ++
Sbjct: 359 SA 360


>gi|158520489|ref|YP_001528359.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
 gi|238686878|sp|A8ZTL8|RF1_DESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158509315|gb|ABW66282.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
          Length = 356

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 174/353 (49%), Positives = 239/353 (67%), Gaps = 6/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D++ RF E+E  M++   V+    Y K + E+A ++ I+     Y     E +   
Sbjct: 3   DRLQDVERRFGELEGLMADPSIVNDREAYQKHSREHAELADIVDAYRRYKAVSDEIEKSR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D EIR+LA+ E+  ++ E   L+ E+  LL PKD +D+K+ ++EIRAGTGG 
Sbjct: 63  DLLED--RDPEIRELAKEEISRLKDERERLDGELQNLLTPKDPNDNKNVLVEIRAGTGGE 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DLFRMY RYA    WK E++SSS    GG+KE++  + G+G +S +KFESG+H
Sbjct: 121 EASLFAHDLFRMYWRYAETMGWKTEIMSSSVTGSGGFKEVIFMVYGKGAYSHLKFESGIH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTSA TVAVL EA E+++ I   +I+ D  R+SG GGQ VNTTDSA
Sbjct: 181 RVQRVPETEAQGRIHTSAVTVAVLAEAEEVELHIDPSEIKTDVFRSSGPGGQSVNTTDSA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQ +N+ +AMKVLRARL D   +    + + NRK Q+GSGDR
Sbjct: 241 VRLTHLPTGVVVICQDEKSQLKNKNKAMKVLRARLLDRMIQDQNEKIAQNRKDQVGSGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           S RIRTYNF QGR+TDHR  +TLYKLE VLQG + +++N L T  QA+ +  A
Sbjct: 301 SGRIRTYNFPQGRVTDHRAGITLYKLESVLQGDLSELVNGLATYFQAERLKQA 353


>gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake]
 gi|119361538|sp|Q3YS23|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis
           str. Jake]
          Length = 359

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 183/357 (51%), Positives = 258/357 (72%), Gaps = 4/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP--SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 + +L  +F +++  + +    SVD+++  ++EY+ + P+IS I  Y+  +++  
Sbjct: 1   MSFDSNLEELYQKFCKLKSILEDPSQLSVDSFVAASKEYSELLPVISVIDQYNSLQKDIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +I +  +D E++ LA+ E    +K++ +++N++   L+PKD DD ++ ILEIRAGT
Sbjct: 61  DLEELINNPETDHELKSLAKEEFYERQKQLPKIKNKLKLSLIPKDRDDARNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFV DL+RMY +YA  + WK E ++SS    GG+KE+   ISG  VF+R+KFES
Sbjct: 121 GGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEVSLCISGSNVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEASGR+HTSAATVAVLPE  E+D+ I  +D+RID  R+SG GGQ VNTT
Sbjct: 181 GVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+GI+V    EKSQH+N+ +A+KVLRARLY++E+++  +E S  RK QIGS
Sbjct: 241 DSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYNLEKQKRDSEISQMRKSQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSA 355
           GDRSERIRTYNF Q RITDHRINLTLY+LE ++ +G +D+ I+ L+   +A  + + 
Sbjct: 301 GDRSERIRTYNFPQSRITDHRINLTLYRLEDIMKEGNLDEFIDALIAEDEANKLKNL 357


>gi|296282001|ref|ZP_06859999.1| peptide chain release factor 1 [Citromicrobium bathyomarinum JL354]
          Length = 355

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 178/357 (49%), Positives = 252/357 (70%), Gaps = 7/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +  +++  + NRFAEIE RM+      + +++ + +YA + P+          ++E   L
Sbjct: 3   IPPERLDQIANRFAEIEARMASGQLEGEEFVQASRDYAELEPVAKLALELKAAREEVAGL 62

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+RD+A+ E+ A+ + I ELE ++   +LP+D+ D K  +LEIRAGTGG
Sbjct: 63  DEMLA----DPEMRDMAEEELEALNQRIPELEQQLAVAMLPRDSADAKPAMLEIRAGTGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL+RMYER+A  + WKVE +S S ++ GG+KEIVA ++G GVF+++KFESGV
Sbjct: 119 DEAALFAGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVAHVTGTGVFAKLKFESGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPE  E+DV +   D++IDT RASG+GGQHVNTTDS
Sbjct: 179 HRVQRVPETESGGRIHTSAATVAVLPEPDEVDVQVDPGDLKIDTYRASGAGGQHVNTTDS 238

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITH+PTG++V     +SQH+NR +AM+VLRARLY+ +R       +  RK  +GSGD
Sbjct: 239 AIRITHLPTGLVVTCQDGRSQHKNREQAMQVLRARLYEQQRDAAQGAEAEARKAMVGSGD 298

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGR+TDHRI LTL KL  ++ G  + ++++ L+   +AK + + +E
Sbjct: 299 RSERIRTYNFPQGRVTDHRIGLTLQKLPQIIAGPGLGELVDALIAEDEAKRLAAMNE 355


>gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
 gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
          Length = 358

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 172/357 (48%), Positives = 247/357 (69%), Gaps = 6/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
                ++ +L+  +AE+E +M++      +     L  +++ +  ++     Y Q + E 
Sbjct: 1   MNLEPKLRELEAIYAELEKKMADPAVVSDIKEMQNLGRKHSELEEVVGDYRRYRQVRDEI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   ++G    D E+ +LA++E+   E  + ++E ++   LLPKD +D+K  I+EIRAG
Sbjct: 61  AEAKELVG--GGDHELAELAKMELEEKEPLLGKIEEQLRVALLPKDPNDEKDVIMEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA+LF  DLFRMY RYA    WK+E++  ++ + GGYKEIV  I GRGV+S++K+E
Sbjct: 119 TGGDEASLFAADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRGVYSQLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVPATEA GR+HTSAATV V+P A +ID++I  ED++IDT R+SG+GGQHVN 
Sbjct: 179 SGVHRVQRVPATEAGGRIHTSAATVVVMPVADDIDIEIRPEDLKIDTYRSSGAGGQHVNM 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ +NR +A++VL+ RLYD E ++  +  SA RK  IG
Sbjct: 239 TDSAVRITHLPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQRSAESAERKGMIG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SGDRSERIRTYN+ Q R+TDHRI LTLYKLEY++ G + ++I  L+ A QA  + + 
Sbjct: 299 SGDRSERIRTYNYPQNRVTDHRIGLTLYKLEYMMDGDLYEMIKALVMAEQAAKLEAL 355


>gi|221632126|ref|YP_002521347.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
 gi|221155596|gb|ACM04723.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
          Length = 363

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 234/354 (66%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ +L+ RF E+E ++++        +   L  E A +  I++         ++     
Sbjct: 10  DKLAELEQRFDEVERQLADPDVATDPQRVAQLARERAELEEIVALYRQLKDIDRQVAQAE 69

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D ++ +LA  E+  + +    +  E+   L+P+D +D+K  I+EIRAGTGG 
Sbjct: 70  ELL--EAEDPDLVELAAEEIDRLREYRETIYQELRRRLVPRDPNDEKDVIVEIRAGTGGE 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  + WKVEVLSSS  + GG+KEI+  + G+G +S  K ESGVH
Sbjct: 128 EAALFAADLFRMYTRYAERQGWKVEVLSSSPTELGGFKEIIFEVRGKGAYSHFKHESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPEA E++V I  +D+RI+  R+SG GGQ VNTTDSA
Sbjct: 188 RVQRVPITESSGRIHTSTATVAVLPEADEVEVHIDEDDLRIEVFRSSGHGGQSVNTTDSA 247

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    E+SQ +NRL+AM VLRARLY+++R+++  ER+  R+ Q+G+G+R
Sbjct: 248 VRITHLPTGIVVSCQDERSQLKNRLKAMAVLRARLYELQRRKLEEERTGLRRQQVGTGER 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +E+IRTYNF Q R+TDHR+ LT+  L  VL G ID  I  L     A+ + +A 
Sbjct: 308 AEKIRTYNFPQDRVTDHRLKLTVNNLPAVLDGEIDIFIQELQALEMAERLRAAG 361


>gi|153809900|ref|ZP_01962568.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174]
 gi|149834078|gb|EDM89158.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174]
          Length = 359

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 245/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF E+   + E    D    + KL +E + + PI+     Y   K+  QD  
Sbjct: 3   DKLEDLLVRFEEVLNELGEPGVTDNQERFQKLMKEQSELQPIVDAYKEYKDNKETIQDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ +     E+R++ + E+   +K + ELE E+  LLLPKD +D K+ I+EIRAG GG 
Sbjct: 63  SMLEEEKD-EEMREMLKEELSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY +YA  R+WK E++S ++N  GG+KE+   I G+G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA EID  + + D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTCTVAIMPEAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A+KVLR+RLY++E  +  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL++L+ VL G +D+I++ L+ A QA  + S +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHRLDAVLGGDLDEILDSLIAADQAAKLSSLNE 356


>gi|255993956|ref|ZP_05427091.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
 gi|255993624|gb|EEU03713.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
          Length = 357

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 173/357 (48%), Positives = 242/357 (67%), Gaps = 4/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +  ++ E+E  +S+   +     + K  +E + + PI+   S + + KQE  D
Sbjct: 1   MLDKLDFIVEKYKELEAAVSKPEIIGNQPLWQKYIKEMSDMEPIVKTYSSFKKHKQELSD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E++DLA++E+  +E EI + E ++  LL+PKD  D+K+ ILEIRAGTG
Sbjct: 61  AKELLAGAGGDEEMKDLAKLEISGLEDEINKEEEQLKILLIPKDPRDEKNVILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL RMY  YA  + WK E++  ++    G KE V  I G+G FSR+K+ESG
Sbjct: 121 GEEAALFGSDLLRMYSMYADSKNWKTEIIELNETGLNGIKEAVMLIKGKGAFSRLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGRVHTSAATVAVLPE  +++VD+   D+R+D  R+SG+GGQ VNTTD
Sbjct: 181 VHRVQRVPTTESSGRVHTSAATVAVLPEMDDVEVDLNPNDVRVDVYRSSGNGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTGI+V    EKSQ +N+ +A KVL++RLY+++ +    + S  RK Q+GSG
Sbjct: 241 SAVRLTHEPTGIVVTCQDEKSQIKNKDKAFKVLKSRLYNLKMEEQNKQLSDERKSQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR++DHRI LT+YKL+  + G ID++I  L+TA QA  +    E
Sbjct: 301 DRSERIRTYNFPQGRVSDHRIGLTIYKLDNFMNGDIDEVIEGLITADQAAKMSKFGE 357


>gi|156933676|ref|YP_001437592.1| peptide chain release factor 1 [Cronobacter sakazakii ATCC BAA-894]
 gi|166223556|sp|A7MKC1|RF1_ENTS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156531930|gb|ABU76756.1| hypothetical protein ESA_01498 [Cronobacter sakazakii ATCC BAA-894]
          Length = 360

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++      + +  L+ EYA +S +      + Q +++ +    
Sbjct: 8   KLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQEDMETARL 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    SD E+RD+AQ E+L  + +   LE E+  LLLPKD DD+++  +E+RAGTGG E
Sbjct: 68  ML----SDPEMRDMAQDELLEAKAKSEALEQELQLLLLPKDPDDERNAFVEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKE++A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + +E
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDALIEPIIQEHQADQLAALAE 358


>gi|46908715|ref|YP_015104.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093870|ref|ZP_00231612.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
           H7858]
 gi|217963353|ref|YP_002349031.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
 gi|226225091|ref|YP_002759198.1| peptide chain release factor 1 [Listeria monocytogenes Clip81459]
 gi|254825334|ref|ZP_05230335.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
 gi|254828119|ref|ZP_05232806.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
 gi|254831034|ref|ZP_05235689.1| peptide chain release factor 1 [Listeria monocytogenes 10403S]
 gi|254853928|ref|ZP_05243276.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
 gi|254900318|ref|ZP_05260242.1| peptide chain release factor 1 [Listeria monocytogenes J0161]
 gi|254913443|ref|ZP_05263455.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
 gi|254932215|ref|ZP_05265574.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
 gi|254937824|ref|ZP_05269521.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
 gi|254993429|ref|ZP_05275619.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-064]
 gi|255026493|ref|ZP_05298479.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-003]
 gi|255519761|ref|ZP_05386998.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-175]
 gi|284802981|ref|YP_003414846.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
 gi|284996122|ref|YP_003417890.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
 gi|290892706|ref|ZP_06555698.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
 gi|300764957|ref|ZP_07074945.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
 gi|61214637|sp|Q71WN5|RF1_LISMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790886|sp|B8DBG6|RF1_LISMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585225|sp|C1KYW0|RF1_LISMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46881987|gb|AAT05281.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017744|gb|EAL08535.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
           H7858]
 gi|217332623|gb|ACK38417.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
 gi|225877553|emb|CAS06267.1| Putative peptide chain release factor 1 [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258600504|gb|EEW13829.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
 gi|258607316|gb|EEW19924.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
 gi|258610428|gb|EEW23036.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
 gi|284058543|gb|ADB69484.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
 gi|284061589|gb|ADB72528.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
 gi|290557766|gb|EFD91288.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
 gi|293583770|gb|EFF95802.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
 gi|293591450|gb|EFF99784.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
 gi|293594577|gb|EFG02338.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
 gi|300514257|gb|EFK41316.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
 gi|307572070|emb|CAR85249.1| peptide chain release factor 1 [Listeria monocytogenes L99]
 gi|332312973|gb|EGJ26068.1| Peptide chain release factor 1 [Listeria monocytogenes str. Scott
           A]
          Length = 358

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 242/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y    ++  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+R++A+ E   ++KE  +LE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLGEKLDD-EMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLND 356


>gi|332829242|gb|EGK01896.1| peptide chain release factor 1 [Dysgonomonas gadei ATCC BAA-286]
          Length = 361

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF EI   +++   +     Y+KL +EY  +  I    + Y Q     ++  
Sbjct: 8   EKLDTLVMRFEEIGKLITDPSVIADMKRYVKLNKEYRDLEKISIARNEYKQLLTNVEEAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  +D+E+R++A+ E+      + ELE EI  LL+P D +D K+ I+EIR GTGG 
Sbjct: 68  NIL-DSENDAELREMAREELDTANVRLPELEEEIKLLLVPADPEDSKNAIVEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL+RMY +Y  L+ W+ E+ S ++   GGYKE++ T++G GV+  +K+ESGVH
Sbjct: 127 EAAIFAGDLYRMYIKYCELKGWRTEITSLTEGTSGGYKEVIFTVTGEGVYGILKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAATVAVLPEA E+DV+I   DI + T R+SG+GGQ+VN  ++ 
Sbjct: 187 RVQRVPATETQGRVHTSAATVAVLPEAEEVDVEINPADIEMQTARSSGAGGQNVNKVETK 246

Query: 244 VRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V++TH P+G ++V    +SQ  NR  AM++LR +LYD+E  +   E ++ RK  + +GDR
Sbjct: 247 VQLTHKPSGLVVVCQQARSQLANRELAMQMLRTKLYDIELSKYQAEIASKRKTMVSTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S +IRTYN+ QGR+TDHRINLTLY L  V+ G I  II+ L+ A   + +  + 
Sbjct: 307 SAKIRTYNYPQGRVTDHRINLTLYNLSGVMDGEIQPIIDQLIIAENTERLKESE 360


>gi|237737785|ref|ZP_04568266.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
 gi|229419665|gb|EEO34712.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
          Length = 358

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 176/355 (49%), Positives = 247/355 (69%), Gaps = 6/355 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ ++  RF E+   +     +    K+    +  A I+P++ K   Y    ++ Q +  
Sbjct: 4   KLEEVVRRFDELNEMLGSPEILSDPKKMMECNKALADITPLVEKYKEYKTLSEDLQFIKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            I  +  D ++R++   E   +E+++ E E E+  LLLPKD +DDK+ I+EIR G GG E
Sbjct: 64  NIR-NEKDHDMREMMNEEQKELEEKLPEYEKELKILLLPKDENDDKNVIVEIRGGAGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  RKWKVE++   +   GG KE V +I+G G +SR+KFESGVHR
Sbjct: 123 AALFAGDLFRMYNRYAERRKWKVEIIEKQEIGIGGIKEAVFSINGLGAYSRLKFESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE++GRVHTS ATVAVLPE  +  +V I  +D++IDT R+ G+GGQHVN TDSA
Sbjct: 183 VQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPKDLKIDTYRSGGAGGQHVNMTDSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    E+SQ +NR +AMK L ++LY++E ++  ++  + RKLQ+G+GDR
Sbjct: 243 VRITHLPTGIVVQCQDERSQLKNREKAMKHLVSKLYEMECEKQRSQVESERKLQVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGRITDHRI  T+Y+L+  L G ID++I+ L+T +QA+M+ SASE
Sbjct: 303 SEKIRTYNFPQGRITDHRIKFTVYQLDAFLDGDIDEMIDALITFNQAEMLASASE 357


>gi|157825817|ref|YP_001493537.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
 gi|166223595|sp|A8GNQ4|RF1_RICAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157799775|gb|ABV75029.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
          Length = 355

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 178/354 (50%), Positives = 247/354 (69%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  ++ KI  Y++ K E ++ 
Sbjct: 1   MSFSDNLAKILDKYDNLGKKLSSGIMGDEFVKASKEYAELEDVVVKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+    + + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLELGFDNATLAMIEDEIHILENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER+    ER+ +R+ QIGSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRNKEQERADSRRGQIGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ I  L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFIEALIAEDEAKKLSE 354


>gi|260584605|ref|ZP_05852351.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633]
 gi|260157628|gb|EEW92698.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633]
          Length = 359

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+     R+ E+   +S+   +     +++LT+E + + P +     Y Q  +E  D  
Sbjct: 3   DQLDSFIIRYDELSELLSDPDVISDTKRFMELTKEESNLRPKVETFKRYQQVVEEIGDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   DSE+ ++A+ E+ +++KE  ELE +I +LLLP+D +D K+ I+EIR   GG 
Sbjct: 63  EMLGE-GLDSEMAEMAKEELASLKKEKVELEEKIKFLLLPEDPNDGKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL  MY++YA  + W+VEV+ ++    GGYKE++  I+G  VFS++K+ESG H
Sbjct: 122 EAALFAGDLLSMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GRVHTS ATV V+PEA E+++++  +DIR+D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRVHTSTATVVVMPEAEEVEIELEDKDIRVDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMKVLRAR+YD   +   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL KL+ VL G ID+I++ L+     + +   +
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALILYDHTEKLEQLN 355


>gi|260598215|ref|YP_003210786.1| peptide chain release factor 1 [Cronobacter turicensis z3032]
 gi|260217392|emb|CBA31449.1| Peptide chain release factor 1 [Cronobacter turicensis z3032]
          Length = 360

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++      + +  L+ EYA +S +      + Q +++ +    
Sbjct: 8   KLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQEDMETARL 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    SD E+RD+AQ E+L  + +   LE E+  LLLPKD DD+++  +E+RAGTGG E
Sbjct: 68  ML----SDPEMRDMAQDELLEAKAKGEALEQELQLLLLPKDPDDERNAYVEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKE++A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + +E
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDALIEPIIQEHQADQLAALAE 358


>gi|16804581|ref|NP_466066.1| peptide chain release factor 1 [Listeria monocytogenes EGD-e]
 gi|224500713|ref|ZP_03669062.1| peptide chain release factor 1 [Listeria monocytogenes Finland
           1988]
 gi|224503217|ref|ZP_03671524.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-561]
 gi|255029752|ref|ZP_05301703.1| peptide chain release factor 1 [Listeria monocytogenes LO28]
 gi|20139329|sp|Q8Y4A8|RF1_LISMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|16412031|emb|CAD00621.1| prf1 [Listeria monocytogenes EGD-e]
          Length = 358

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 242/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y    ++  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+R++A+ E   ++KE  +LE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLGEKLDD-EMREMAKEEFAELQKEKTDLEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLND 356


>gi|293375558|ref|ZP_06621832.1| peptide chain release factor 1 [Turicibacter sanguinis PC909]
 gi|325836776|ref|ZP_08166243.1| peptide chain release factor 1 [Turicibacter sp. HGF1]
 gi|292645775|gb|EFF63811.1| peptide chain release factor 1 [Turicibacter sanguinis PC909]
 gi|325491154|gb|EGC93443.1| peptide chain release factor 1 [Turicibacter sp. HGF1]
          Length = 354

 Score =  279 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 230/354 (64%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  +  R+ +I   M++   V    KL   ++E   +   ++  + Y       +DL 
Sbjct: 3   ERLEAILERYEKINEMMADPAIVTDIKKLTELSKEQRGLEETVNVYTEYKNIASSIEDLK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D  SD EI ++A++E+  ++  + ELE ++  LL+PKD +D+K+ I+EIR   GG 
Sbjct: 63  EMAKD--SDPEISEMAEMELEELKPRLPELEQQLEILLIPKDPNDEKNVIVEIRGAAGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F  DL+RMY +YA L+ WK++V++   ++ GG  ++   ISG  VFS MK+ESG H
Sbjct: 121 EANIFASDLYRMYTKYAELKGWKIQVMNVDYSESGGMSQVEFMISGESVFSHMKYESGAH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTS ATV V+PEA ++D+++ + DIR+DT  +SG GGQ VNTT SA
Sbjct: 181 RVQRVPATESQGRIHTSTATVLVMPEAEDVDIEVSMNDIRVDTFCSSGPGGQSVNTTKSA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V     KSQH+N+  A+KVL+AR+YD   +         R+ +IG+G+R
Sbjct: 241 VRLTHVPTGIVVSCQDGKSQHENKANALKVLKARIYDSILQERLEAEGEERRSKIGTGER 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+ Q R+TDHRI  T+ +L+ V++G ++ +I  L+T  Q + +    
Sbjct: 301 SEKIRTYNYPQNRVTDHRIGFTIQQLDRVMEGKLEPVIEALITEEQKRKLAHQE 354


>gi|320160374|ref|YP_004173598.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
 gi|319994227|dbj|BAJ62998.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
          Length = 357

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 161/355 (45%), Positives = 243/355 (68%), Gaps = 4/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSES-PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             +++  +++RF E+   + E+       I+L++E A + PI+ K   Y    ++ ++  
Sbjct: 1   MLEKLIAIESRFEELNRLLEENAGDYQKVIELSKERADLEPIVEKAQEYRTVLKQIEEAR 60

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           T++   + D E+R+LA+ ++  +E     LE E+  LL+PKD  D+++ I+EIRAGTGG 
Sbjct: 61  TLL--ESGDEELRELAEADLETLEPRQEVLEKELKTLLIPKDPRDERNVIVEIRAGTGGE 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA  R W VE++S ++   GGYKEI+  + G+G +SR+K+ESGVH
Sbjct: 119 EAALFAGDLFRMYSRYAEKRGWSVEIISQNETGIGGYKEIIFMVKGKGAYSRLKYESGVH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+SGR+HTS ATVAVL E  E+D++IP  D+ I+  R++G+GGQ+V    +A
Sbjct: 179 RVQRIPVTESSGRIHTSTATVAVLAEVDEVDINIPDSDLEIEVYRSAGAGGQNVQKNSTA 238

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    E+SQ QN+LRAM +LRA+LY++E ++   E  A R+ Q+G+G+R
Sbjct: 239 VRITHLPTGIVVACQDERSQLQNKLRAMSILRAKLYEIEEQKRQQELDATRRSQVGTGER 298

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +E+IRTYNF Q R+TDHRI ++ Y L  VL G ID  I+ L    + + + + ++
Sbjct: 299 AEKIRTYNFPQSRVTDHRIGISSYNLPAVLDGEIDLFIDELALRSETERLATGAD 353


>gi|82703754|ref|YP_413320.1| peptide chain release factor 1 [Nitrosospira multiformis ATCC
           25196]
 gi|119361568|sp|Q2Y5P3|RF1_NITMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82411819|gb|ABB75928.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosospira
           multiformis ATCC 25196]
          Length = 358

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 244/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +S      ++D Y KLT E A I+P++   + Y Q +Q
Sbjct: 1   MNKSMTAKLTQLSVRLEELNRLLSSESITVNLDQYRKLTRERAEIAPVVDLYNAYLQSEQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +     E+R+ A  E+   ++ +     E+   LLPKD +D+++  LEIR
Sbjct: 61  DIHTAQEMAAEA----EMREFADAEIRDAKERLVRYGAELQKQLLPKDPNDERNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DLFRMY R+A  ++W+VE++S S +D GGYKEI+A ISG G +S++K
Sbjct: 117 AGTGGDESALFAADLFRMYARFAERQRWQVEIISQSPSDVGGYKEIIAKISGEGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PEA EI+       ++RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIEDVALNPAELRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+V     +SQH+N+ +AM VL AR+ D + +   ++++A RK 
Sbjct: 237 INKTDSAVRITHLPTGIVVECQDGRSQHKNKAQAMSVLAARIRDKQMQEQQSKQAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+G+RS RIRTYNF QGRITDHRINLTLYK+E ++ G ++++ + LL  HQA+ + + 
Sbjct: 297 LVGTGNRSGRIRTYNFPQGRITDHRINLTLYKIEQIMDGDLNELCSALLAEHQAEQLAAM 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|326796200|ref|YP_004314020.1| peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
 gi|326546964|gb|ADZ92184.1| Peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
          Length = 362

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 168/361 (46%), Positives = 246/361 (68%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E+   +SE+  +     +   ++EY+ + P++     Y    +
Sbjct: 1   MKESIKFKLESLAERYEELAALLSEADVIMDQNLFRNYSKEYSELEPVVKCFEEYQVVLE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++ D  SD +I+++ Q E+ +  ++   L  ++  LLLPKD +D K+  LE+R
Sbjct: 61  NLEEAQLMLTD--SDPDIKEMGQEELKSGNEQKETLLLDLQKLLLPKDPNDSKNVFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLFRMY RYA  ++WKVE++S+++ + GGYKEI+A I G G +S++K
Sbjct: 119 AGTGGDEASIFSGDLFRMYSRYAETQRWKVEIVSANEGEHGGYKEIIARIVGEGAYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PE  E  D+DI   D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPATESQGRIHTSACTVAVMPEMDEVSDIDINKADLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RI H+PTG++V    E+SQH+NR +AM +L +RL   E  + A E+S  R+ 
Sbjct: 239 VNKTDSAIRIVHLPTGVVVECQDERSQHKNRAKAMALLASRLKAAEEDKAAAEQSETRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+RIRTYN+ QGR+TDHRINLTLYKL+ ++ G +D ++ PL+  HQA  + + 
Sbjct: 299 LVGTGDRSDRIRTYNYPQGRVTDHRINLTLYKLDEIVAGDLDVLVGPLVNEHQADQLATL 358

Query: 356 S 356
            
Sbjct: 359 G 359


>gi|291550093|emb|CBL26355.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           torques L2-14]
          Length = 356

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 251/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   + E    +    + KL +E + ++PI+     Y + KQ  ++  
Sbjct: 3   DRLEDLVIRYQEVMGELQEPDVANDPERFRKLMKEQSDLAPIVEAYQEYKKCKQNVEESL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I +  SD E+R+LA+ E+   +  I ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  -MILEEESDEEMRELAKEELNESKARIEELEQELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R+WK E++S ++N  GG+KE V  I+G+G +SRMK+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++     +A R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKKQASEAAERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL+KL+ +L G +D++I+ L+ A Q   +    E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQTAKLAKMEE 356


>gi|317499018|ref|ZP_07957299.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|291560728|emb|CBL39528.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SSC/2]
 gi|316893668|gb|EFV15869.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 357

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 165/355 (46%), Positives = 247/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L +R   +   +++       + +  L +E   ++PI+ K   Y  +KQ  +D  
Sbjct: 3   DKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+++LA+ E+   +  +  LE E+  LL+PKD  DDK+ I+E+RAG GG 
Sbjct: 63  -MLLEEESDEEMKELAKEELNESKANVERLEEELKILLIPKDPMDDKNIIVEMRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LFV D+ RMY  YA  ++WKV  LS +++  GG+KE+V  +SG+G +SR K+ESGVH
Sbjct: 122 EAGLFVADVARMYRNYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYSRFKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE+ GR+HTS  TVA++PE  +++V+I + D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPATESGGRIHTSTITVAIMPEVEDVEVEIDMNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +A+KVLR+RLY++E+++  +E +A RK QIG+GDR
Sbjct: 242 VRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDEEAAKRKSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+ QGR+TDHRI LTL+KL+ ++ G +D++I+ L  A QA  + +  E
Sbjct: 302 SEKIRTYNYPQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTAADQAAKLSNMEE 356


>gi|28210063|ref|NP_781007.1| peptide chain release factor 1 [Clostridium tetani E88]
 gi|32171526|sp|Q898Y5|RF1_CLOTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28202498|gb|AAO34944.1| bacterial peptide chain release factor 1 [Clostridium tetani E88]
          Length = 355

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 251/356 (70%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++N++ E+ +++S+   +     + KL +E++ +  I++    Y +  Q  +D
Sbjct: 1   MLDRLNFIENKYEELSIKISDPTVMQDQKEWQKLCKEHSDMETIVTTYKEYKEVLQSIED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ + + + E+RD+ Q ++  +E+ ++ELE E+  LL+PKD +D+K+  +EIRAG G
Sbjct: 61  NKEMLKE-DIEQELRDMVQEDIKELEQRVQELEQELKMLLVPKDPNDEKNVFIEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY RYA    WK E +S ++ D GG+KEIV  + G+G +SR+K+ESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHNWKTEAVSVNETDIGGFKEIVFMVRGKGAYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTS ATVAVLPE  ++DV+I   D+R+D  RASG GGQ VNTTD
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVEDVDVEINQNDLRVDVYRASGHGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+P+G++V    EKSQ +N+ +AMKVL++RLYD+     +   + +RK Q+G+G
Sbjct: 240 SAVRITHLPSGLVVTCQDEKSQLKNKEKAMKVLKSRLYDMLESERSASIAEDRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ QGR+TDHRI LTLYKLE  L G I+++I+ L+T  Q++ +   S
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLYKLESFLDGDIEEMIDGLITVEQSERMKDIS 355


>gi|313158318|gb|EFR57720.1| peptide chain release factor 1 [Alistipes sp. HGB5]
          Length = 361

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 230/353 (65%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  LK ++ E   ++++   +     +++L +EY  + PII     Y        +   
Sbjct: 9   RLDGLKLKYEETGQKLTDPEVIADVKQFVQLNKEYKELEPIIETSERYRTALANLAEAKD 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++  ++ D E+R++A+ E+  +E  I ++E +I  LL+PKD  D K+ I+EIR GTGG E
Sbjct: 69  ILA-NDKDEEMREMARGEITELEPAIEQMEEQIKLLLIPKDPQDSKNAIMEIRGGTGGDE 127

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDL RMY +Y   + W+ E+ S SD   GGYKE+V  ++G+ V+  +K+ESGVHR
Sbjct: 128 AAIFAGDLLRMYTKYIESKGWRYEMTSFSDGAAGGYKEVVLKVTGQNVYGTLKYESGVHR 187

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTSAA+VAVLPEA E DV+I + DIR D   ASG GGQ VNTT SA+
Sbjct: 188 VQRVPQTETQGRVHTSAASVAVLPEAEEFDVEISMNDIRKDIFCASGPGGQSVNTTYSAI 247

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V    +KSQ +N  +A + LR R++++E  +  +E ++ RK  + +GDRS
Sbjct: 248 RLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDEIASKRKTMVSTGDRS 307

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            +IRTYN+ QGRITDHRIN T+Y L   + G I D+I+ L+ A  A+ +  + 
Sbjct: 308 AKIRTYNYPQGRITDHRINYTIYNLSAFMDGDIQDVIDHLIVAENAERLKESE 360


>gi|226323866|ref|ZP_03799384.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
 gi|225207415|gb|EEG89769.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
          Length = 358

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 254/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ EI   + E   V+    + KL +E   ++PI+     Y   KQ  +D  
Sbjct: 3   DKLEDLLIRYEEIMGELQEPDVVNDQSRFRKLMKEQNDLTPIVEAYKEYKNCKQNIED-S 61

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +  SD E+++LA+ E+   +K + ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 62  LSLLEEESDEEMKELAKEELSESKKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R+WK E++S ++N  GG+KE+V  I+G+G +SRMK+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKEVVFMITGQGAYSRMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LY++E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQHSAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL+KL+ ++ G +D++I+ L+ A QA  + S +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDSIMNGDLDEVIDSLIAADQAAKLASMNE 356


>gi|323345650|ref|ZP_08085873.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269]
 gi|323093764|gb|EFZ36342.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269]
          Length = 370

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 143/360 (39%), Positives = 221/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++R+ E+   +++   ++      KLT+EY  +  I+     Y       Q+  
Sbjct: 9   EKLDGLESRYEEVSTLITDPDVINDQQRYVKLTKEYKDLGDIMEARRRYIACLNAIQEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD++++++A+ E+   E    +LE EI   L+PKD +D+K+  +EIRAGTGG 
Sbjct: 69  ELLA-NESDADMKEMAREELATNEALQPKLEEEIKLALVPKDPEDEKNVQMEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++Y   + W + V S S+   GG+KEI   +SG  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKKYCDSKGWTLSVTSESEGAVGGFKEIDFAVSGANVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ +  RK
Sbjct: 248 VRLRYPWRNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIANRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  L G I ++I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNFPQGRVTDHRIGFTTHDLQGFLGGNIQEMIDALTVAENAEKLKE 367


>gi|282882091|ref|ZP_06290732.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
 gi|281298121|gb|EFA90576.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
          Length = 358

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 164/352 (46%), Positives = 243/352 (69%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++   ++R+ E+E  + +   ++    Y K   E+A + PI+SK   Y + K+   D  
Sbjct: 3   EKLSVFEDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D +++DL + ++   EK + ++E ++  LL+PKD +D K+ ++EIRAG GG 
Sbjct: 63  ALLAEKLDD-DMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFR Y RYA    WKV+++S+++   GGYKE+V  I GRG +SR+K+ESGVH
Sbjct: 122 EAALFAGTLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++V+I   +I+ D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ  N+ +AMK+LRA+LYD++ +    + SA R  Q+G+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQNEKNSAQRLSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYN+ QGR+TDHRIN T +++  +  G +D++I+ L  A Q K + +
Sbjct: 302 SERIRTYNYPQGRVTDHRINYTTHQIVSINDGELDELIDALTAADQIKKLEN 353


>gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
 gi|189039992|sp|A8H7A5|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
          Length = 361

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 248/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S++  +     +  L++EY+ +  ++S    + Q ++
Sbjct: 1   MKDSVIRKLEGLLERNEEVLALLSDAGVIADQERFRALSKEYSQLEDVVSTFKSFQQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E++++AQ E    +  I  LE+E+  LLLPKD +DD +C +EIR
Sbjct: 61  DLESAKEMM--EEDDPELKEMAQEEYKVAKSAIAALEDELQILLLPKDPNDDNNCFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  ++W++EV+++++ + GG+KE++A ISG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VLPE  E + ++I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYNF QGR+++HRINLTLY+L   ++G ID ++ PL+  +QA M+ + 
Sbjct: 299 LVSSGDRSERIRTYNFPQGRVSEHRINLTLYRLGEFMEGDIDCVVEPLIQENQADMLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|300115109|ref|YP_003761684.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
 gi|299541046|gb|ADJ29363.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
          Length = 360

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 178/362 (49%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   ++E         + +L++EYA + P+IS    ++Q + 
Sbjct: 1   MKDSIRSKLETLAERQQELTALLAEPEIASAQKQFRELSQEYAQLEPVISCFRDFEQAQN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   ++ D   D E+R LAQ E+ A EK++  L+ E++ LLLP D +D ++  LEIR
Sbjct: 61  VLDESKALLQDQ--DPELRVLAQEEIAATEKKLERLDRELHTLLLPTDPNDKRNIFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  DL RMY RY   R W+ E++  S  + GG+KEI+  I G G +SR+K
Sbjct: 119 AGTGGDEAALFASDLLRMYLRYVEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PEA E  ++DI   D+R+DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPQTESQGRIHTSACTVAIMPEAEEIDEIDINPADLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+GI+V    E+SQH+NR RAM +LR +L   E +++  E +A R+ 
Sbjct: 239 VNKTDSAIRITHLPSGIVVECQDERSQHKNRARAMSLLRTKLKLEEEEKLVAEETATRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +LQG +D II+ L+  +QA  + + 
Sbjct: 299 LIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEILQGNLDAIIDLLVAEYQADQLAAL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|229917064|ref|YP_002885710.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
 gi|259585222|sp|C4KYV2|RF1_EXISA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229468493|gb|ACQ70265.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
          Length = 356

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 248/354 (70%), Gaps = 4/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L++R+ ++   +++   +    KL   ++E A +   +     Y +  Q  ++  
Sbjct: 3   DRLSVLEDRYMQLNEMLADPEVLSDSTKLRQYSKEQAQLEETVQMYRQYKETSQAFKEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ D   D+E+R+LA+ E+  +E E++ELE ++  LLLPKD +D+K+ I+E+R   GG 
Sbjct: 63  SMLEDRTLDAEMRELAKEEMNLLEPEVKELEAKLRILLLPKDPNDEKNVIVEVRGAAGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL++MY R+A  + WKVE++ ++  + GG+KE+   I+G G +S++KFE+G H
Sbjct: 123 EAALFAGDLYKMYTRFAERQNWKVELIDANYTELGGFKEVTFMINGAGAYSKLKFENGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATVAVLPEA +++V I ++D+R+DT  +SG GGQ VNTT SA
Sbjct: 183 RVQRVPSTESGGRIHTSTATVAVLPEAEDVEVHIDMKDVRVDTFTSSGPGGQSVNTTQSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIP+G++V    EKSQH+N+ +AMKVLRARLYD  +     E SA RK  +G+GDR
Sbjct: 243 VRLTHIPSGLVVSCQDEKSQHKNKDKAMKVLRARLYDKMQSEHMEELSAQRKSAVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL KL+ VL G ++DII+ L+   QA+++  A 
Sbjct: 303 SERIRTYNFPQSRVTDHRIGLTLQKLDRVLAGELEDIIDALIMDEQARLMEDAE 356


>gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
 gi|189039993|sp|A8FYZ0|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
          Length = 361

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 250/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S+   +     +  L++EY+ +  +++    + Q  +
Sbjct: 1   MKDSVIRKLEGLLERNEEVLALLSDPGVISDQERFRALSKEYSQLEDVVTSFKSFQQATE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  D   D E++++AQ E+   +  + +LE+E+  LLLPKD +DD +C +EIR
Sbjct: 61  DLEAAKEMASD--DDPELKEMAQEEMKEAKSLLEKLEDELQILLLPKDPNDDNNCFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY +Y   ++W++EV+++++ + GG+KE++A +SG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSKYVESKRWQLEVMNTNEGEHGGFKEVIAKVSGEGVYGQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VLPE  E + ++I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVVVLPEIPESEAIEINKGDLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+THIP+GI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSAEESTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  +QA M+ + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRVSEHRINLTLYRLNEVMEGELDAILEPLMLENQADMLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|317491752|ref|ZP_07950187.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920186|gb|EFV41510.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 360

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++  +   D +  L+ EYA ++ +      + Q +++      
Sbjct: 8   KLEALQERHEEVQAHLGDAGVIADQDRFRALSREYAQLTDVTRCFQTWQQVQEDLSTAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   + +I +LE ++  LLLPKD DD++SC LEIRAGTGG E
Sbjct: 68  ML----DDPEMREMAQEEIAEAKNQIADLEQQLQILLLPKDPDDERSCYLEIRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GD+FRMY RYA  R+WK+EV+S+++ + GGYKEI+A + G G + R+KFESG HR
Sbjct: 124 AALFAGDMFRMYSRYAESRRWKIEVMSANEGEHGGYKEIIAKVIGDGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEIPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMAKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLT+Y+L+ V++G +D +I P++  +QA  + S SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTIYRLDEVMEGKLDSLIEPIVQEYQADQLASLSE 358


>gi|90407674|ref|ZP_01215854.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
 gi|90311265|gb|EAS39370.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
          Length = 363

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 159/362 (43%), Positives = 238/362 (65%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +       D Y KLT+EY+ +  ++     Y    +
Sbjct: 1   MKASIVAKLEGLVERYEEVQALLGDPATLADQDKYRKLTKEYSQLEVVVLSFKGYQGAVE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D   D E++++A  EV   +  +  L +E+  LLLPKD +DD++C +EIR
Sbjct: 61  DLESAKMMLED--DDPEMQEMAVEEVKEAKATLETLSSELEILLLPKDPNDDRNCYIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F G+LFRMY +Y   +KW++E+++++ ++ GGYKE++A I G G +  MK
Sbjct: 119 AGAGGDEAAIFAGNLFRMYSKYIDSKKWRLEIMNTNASEQGGYKEVIAKIEGEGAYGIMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TV V+PE  E +  +    D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVVVMPEVPEAEAIVINPADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+THIPTG +V    ++SQH+NR +AM VL+ARL   E ++   E    R+ 
Sbjct: 239 VNKTDSAVRLTHIPTGTVVECQDQRSQHKNRAQAMSVLQARLQQAEDEKNHAEEQVIRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYN+ QGR++DHRINLTLY L  +L+G +D +++P+L   QA  + + 
Sbjct: 299 LVASGDRSERIRTYNYPQGRVSDHRINLTLYCLHDILEGELDALLDPILLEDQADKLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AQ 360


>gi|205375314|ref|ZP_03228104.1| peptide chain release factor 1 [Bacillus coahuilensis m4-4]
          Length = 356

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 237/355 (66%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ ++   +S+   V    KL   ++E +     +     Y   K++  D  
Sbjct: 3   DRLQAVEDRYDKLNELLSDPEVVSDPKKLREYSKEQSGHQATVEAYREYKDAKEQYNDAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+R++ + E+  +E++I  LE  +  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 63  QMLEDK-LDPEMREMVKEEISELEEQIESLEERMKILLIPKDPNDDKNVIMEVRGAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G L+RMY R+A ++ WK EV+ SS    GGYKEI+  I+G G FS+MK+E+G H
Sbjct: 122 EAALFAGTLYRMYSRFAEMQGWKTEVIESSPTGLGGYKEIIFMINGNGAFSKMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPEA E++++I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVACLPEAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG +V    EKSQ +N+ +AMKVLRAR+YD  ++    E  A RK  +GSGDR
Sbjct: 242 VRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDAQRKSAVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D++I+ L+   Q+  + S  +
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKMDEVIDALILEDQSSKLESMED 356


>gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
 gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
          Length = 386

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 238/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+  L  R+ E+E  MS+   +     Y+ L++E   +  +++    Y Q   + ++  
Sbjct: 33  EQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESE 92

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V+ + + D ++  LA+ ++  ++K+  +LE +I  L+LPKD +DDK+ I+EIR   GG 
Sbjct: 93  EVLRE-SKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAGGD 151

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF GDL  MY  YA  + WK E++ S+  + GGYKE+V  I+G  V+S++K+E+G H
Sbjct: 152 EASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENGAH 211

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  E+D+ I  +DIR D  R+SG+GGQHVN T SA
Sbjct: 212 RVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTSSA 271

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +NR RAM++LR+R+YD        +   NRK  IG+GDR
Sbjct: 272 VRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTGDR 331

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II+ L+   QA+ + S +
Sbjct: 332 SERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESLN 385


>gi|269837927|ref|YP_003320155.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
           20745]
 gi|269787190|gb|ACZ39333.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
           20745]
          Length = 361

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 171/357 (47%), Positives = 245/357 (68%), Gaps = 6/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  L+ RF E++  +++   V    KL     E A +  +++      +   E  
Sbjct: 3   ILTSKLDQLEARFEELDRLLADPEVVTNPEKLAEYGRERADLEEVVTTYRTRKRVDAEIA 62

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +  +++   + D ++ +LA+ E+  + +E   L+NEI  LL+PKD +D+K+ I+EIRAGT
Sbjct: 63  EAESLLR--SGDPDLEELAEEELKRLREERERLDNEIRMLLVPKDPNDEKNVIVEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLFRMY +YA  R WK++V+S+++   GG+KEI+  + GRG +S +K+ES
Sbjct: 121 GGEEAALFAADLFRMYSQYAEKRGWKIDVMSANETGIGGFKEIIFEVRGRGAYSELKYES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTS ATVAVLPEA E+D+ I  ED+RID  R++G GGQ VNTT
Sbjct: 181 GVHRVQRVPVTESGGRIHTSTATVAVLPEAEEVDIQINEEDLRIDVFRSTGHGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V    EKSQ +NR +AM VLRARLYD+E++R+  ERS  R+ Q+G+
Sbjct: 241 DSAVRITHLPTGLVVTCQDEKSQIKNRAKAMAVLRARLYDLEQRRLHEERSGMRRSQVGT 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+R+E+IRTYNF Q R+TDHR+ L+L  L  +L G ID  I  L  A QA+ + +A 
Sbjct: 301 GERAEKIRTYNFPQDRVTDHRLKLSLGNLPEILNGEIDTFIRELRAADQAERLKAAG 357


>gi|169826579|ref|YP_001696737.1| peptide chain release factor 1 [Lysinibacillus sphaericus C3-41]
 gi|238688208|sp|B1I069|RF1_LYSSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168991067|gb|ACA38607.1| Peptide chain release factor 1 (RF-1) [Lysinibacillus sphaericus
           C3-41]
          Length = 358

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 238/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+  +   +S+   V+   KL   ++E + I   +     Y   K++  D  
Sbjct: 3   DRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKNVKEQLVDTR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D ++ ++ + E   ++ +  ELE  +  LL+PKD +D+K+ I+EIR   GG 
Sbjct: 63  EML-DSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDLFRMY RYA  + WK++++ ++ N  GGYKE++  I+G+G +S+ KFE+G H
Sbjct: 122 EANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTS ATVA LPE  E+DV+I  +DIR+DT  +SG+GGQ VNTT SA
Sbjct: 182 RVQRVPATESQGRIHTSTATVACLPEVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V+   E+SQ +NR +AMK+LRAR+ D+  +    E  A RK  +GSGDR
Sbjct: 242 VRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQKEIDATRKSAVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   QA  +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGRLDEIIDTLILEEQASKLERLND 356


>gi|108759492|ref|YP_633064.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622]
 gi|20139339|sp|Q93NC7|RF1_MYXXA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361565|sp|Q1D2Q9|RF1_MYXXD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14517940|gb|AAK64443.1|AF377339_4 peptide chain release factor RF-1 [Myxococcus xanthus]
 gi|108463372|gb|ABF88557.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622]
          Length = 362

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 6/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++ D++ RF  +   +S    +       K+++E A +  ++     Y +   +  +
Sbjct: 1   MIDKLEDVERRFERLTADLSNPDVLADSARLQKVSKERAGLEKLVEAFRTYRKVLADLSE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +   +G  +SD++ +  A+  +  ++++  ELE  +  LLLPKD +D+K+ ILEIRAG G
Sbjct: 61  VEAWLG--SSDADEKAFARESLPGLKEQRDELEASLKILLLPKDPNDEKNVILEIRAGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  ++ +MY RYA  R WK ++L  S  + GG K+   T+SG  VFS MK+ESG
Sbjct: 119 GDEAALFAEEVMQMYLRYADRRGWKADILDMSPGNAGGVKDATVTLSGDAVFSSMKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTS  TV+V+PEA ++DV +   DI +  MR++GSGGQ VNTTD
Sbjct: 179 VHRVQRVPATETQGRIHTSTITVSVMPEAEDVDVQVNPADIEMQVMRSTGSGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H PTGI+V    EKSQ +NR  AM++LRA+LYD+E++R+ NER + R+ Q+G+G
Sbjct: 239 SAVRLIHHPTGIVVKCQQEKSQLKNRTMAMRMLRAKLYDIEQERIRNERDSARRAQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSE+IRTYNF Q R+TDHRI LT++ L  V+ G ++D+I    T +QA+ + + 
Sbjct: 299 DRSEKIRTYNFPQDRLTDHRIGLTVHNLPGVMAGDVEDVITACRTFYQAEALKAQ 353


>gi|332653076|ref|ZP_08418821.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16]
 gi|332518222|gb|EGJ47825.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16]
          Length = 354

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 239/354 (67%), Gaps = 8/354 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ ++++IE R+S S + +      KL +E   + P++     Y + +Q   +
Sbjct: 1   MQDKLAAIEAKYSQIEARLSASETYEDPALVAKLNKEQTELQPLVETYRTYLRTQQSHLE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             +++    SD E+++LAQ E    ++++  LE+++  LLLPKD +DDK+ I+EIRAG G
Sbjct: 61  AESLL----SDPEMKELAQEEWRQSKEDLERLEHQLKILLLPKDPNDDKNVIVEIRAGVG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF   L+RMY  +A    WK EV S S+ + GG KEI  TI G G +SR+KFESG
Sbjct: 117 GEEAALFAHSLYRMYSMFAEANHWKTEVDSVSETELGGVKEISFTIEGDGAYSRLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GRVHTS  TVAVLPE    DV I   DI +   R+SG+GGQHVN T 
Sbjct: 177 VHRVQRVPETESGGRVHTSTVTVAVLPEMETADVQINPADIEMQVFRSSGAGGQHVNKTS 236

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H PTG +V    E+SQ QNR +AM++L +RLY+ E++++++E +A R+ Q+GSG
Sbjct: 237 SAVRLIHKPTGTVVECQQERSQFQNRDKAMRILASRLYEAEQEKISSEYTAQRRSQVGSG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            R+ERIRTYNF QGR+TDHRI LTLYK++ ++ G ++++I+ L  A QA+ + S
Sbjct: 297 MRNERIRTYNFPQGRVTDHRIGLTLYKIDNIMNGDLNEVIDALAAADQAERLQS 350


>gi|160945367|ref|ZP_02092593.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443098|gb|EDP20103.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
           M21/2]
          Length = 361

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 230/354 (64%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  +  RF E+ +R+++  +      + KL  EY    P++     +            
Sbjct: 7   RMDAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTALDHLAQAKA 66

Query: 65  VIGDHNS-DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++ +  S D + + + Q E+    +++ +LEN +  LLLPKD +D K+ I+EIR+G GG 
Sbjct: 67  LLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIMEIRSGAGGE 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L RMY  YA  R W +E+L+ ++ + GG KE + ++ G G ++R+K+ESGVH
Sbjct: 127 EAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTS ATVAV+P+A E+D  + ++D+RIDT R+SG+GGQH+N T SA
Sbjct: 187 RVQRVPETETQGRIHTSTATVAVMPQAEEVDFALDMKDLRIDTFRSSGAGGQHINKTSSA 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +R+THIPTG +V   +E+SQ QN+ +A+++LR+RL   ++K   +  +A R+ Q+G+GDR
Sbjct: 247 IRVTHIPTGTVVECQNERSQFQNKDKALEILRSRLLAQKQKEQQDAINAQRQGQVGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF Q R TDHRI LT++ LE ++ G +D++I+ L T  Q + +    
Sbjct: 307 SEKIRTYNFPQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQTEKLQRLG 360


>gi|30249865|ref|NP_841935.1| peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718]
 gi|46576779|sp|Q82TH4|RF1_NITEU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|30180902|emb|CAD85824.1| prfA: peptide chain release factor 1 [Nitrosomonas europaea ATCC
           19718]
          Length = 359

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 180/356 (50%), Positives = 237/356 (66%), Gaps = 9/356 (2%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  L  R  E++  +S       +D Y KL+ E A I P+      Y Q +Q+     
Sbjct: 7   DQLTRLSMRLGELDKLLSTEKITADLDNYRKLSRERAEIEPVTELYRTYQQVEQDLATAR 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +    +SD + RD A+ E+ A  +++  +E EI   LLPKD +D+++  LEIRAGTGG 
Sbjct: 67  EM----SSDPQFRDFAEAEIEADRRKLTNIETEILRQLLPKDPNDERNIFLEIRAGTGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF GDLFRMY RYA    W+VEV+S + ++ GGYKEI+  I G G +SR+KFESG H
Sbjct: 123 ESALFAGDLFRMYSRYAEREGWQVEVVSQNPSEVGGYKEIIVRIIGHGAYSRLKFESGGH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVPATE  GRVHTS  TVAVLPEA EI        D+RIDT RASG+GGQH+N TDS
Sbjct: 183 RVQRVPATETQGRVHTSTCTVAVLPEADEIADITLNPADLRIDTFRASGAGGQHINKTDS 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+      +SQH+N+ +AM VL AR+ D + +    E++A RK  +GSG+
Sbjct: 243 AVRITHLPTGIVAECQEGRSQHKNKAQAMSVLIARILDKQVRAQQAEQAATRKSLVGSGE 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGRITDHRINLTLYK+E ++ G +D++ + L   HQA  + + +E
Sbjct: 303 RSERIRTYNFPQGRITDHRINLTLYKIEQIIDGELDELCSALAAEHQAAQLAAMTE 358


>gi|23015680|ref|ZP_00055449.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 354

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 175/358 (48%), Positives = 250/358 (69%), Gaps = 8/358 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAY--IKLTEEYAAISPIISKISIYDQKKQEEQ 60
                Q   +  R  E+  ++S    +D+    +L++E + + P+++ +  + + +++  
Sbjct: 1   MNLEPQFDKVLYRHDEVRAQLSSGDGLDSQTIQRLSKELSELDPVVTAVVAFRKAREDMV 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++    +D +++DLA+ E  A+++ +  LE E+  +LLPKD  D+K+ I+E+RAGT
Sbjct: 61  QAAEMM----NDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMYERYA++  W+ EV+  +D   GG KE  ATI+GR VF+R+KFES
Sbjct: 117 GGEEAALFAAELFRMYERYASVHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFES 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE+ GR+HTSAATVA++PEA E+D+ +   D+R D  R+ GSGGQ VNTT
Sbjct: 177 GVHRVQRVPATESQGRIHTSAATVAIMPEAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTT 236

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+THIPTG+ +    EKSQH+N+  A+K+LRARLY+ ER     ER+A RK Q+GS
Sbjct: 237 DSAVRVTHIPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTLYK++ V+ G  +D++I  L+ A QA+ +    
Sbjct: 297 GDRSERIRTYNFPQGRVTDHRINLTLYKIDAVMSGDALDELIEALVAADQAERLAEME 354


>gi|317495271|ref|ZP_07953641.1| peptide chain release 1 [Gemella moribillum M424]
 gi|316914693|gb|EFV36169.1| peptide chain release 1 [Gemella moribillum M424]
          Length = 362

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 234/353 (66%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  ++ R+ ++   +S+   V    KL   ++E  +I   ++    Y    Q+  D   
Sbjct: 6   QLEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKNIVQQIADTKE 65

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++ Q E+  +E  +  +E E+  LLLPKD +D K+ ++E+R   GG E
Sbjct: 66  LLEIEE-DKEMKEMMQEEIKELEPSLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF GDL RMY R+A  + WKV+VL  S+   GG KE +  ISG  V+S+MKFESG HR
Sbjct: 125 AQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+SGR+HTS ATV VLPEA EI++DI   DIR+DT  +SG+GGQ VNTT SAV
Sbjct: 185 VQRVPTTESSGRIHTSTATVVVLPEAEEIEIDINENDIRVDTFASSGAGGQSVNTTMSAV 244

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG++V+   E+SQ +N+ +AMKVLRAR+YD  ++    +  A RK ++G+GDRS
Sbjct: 245 RLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQEEQAKFDAERKSKVGTGDRS 304

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+++  L  A QA+ +   +
Sbjct: 305 ERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQAEKMAELN 357


>gi|167644945|ref|YP_001682608.1| peptide chain release factor 1 [Caulobacter sp. K31]
 gi|167347375|gb|ABZ70110.1| peptide chain release factor 1 [Caulobacter sp. K31]
          Length = 334

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 191/336 (56%), Positives = 247/336 (73%), Gaps = 5/336 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M  +      +KL++E+A + P+   +    +   E  DL  +      D E+  +   E
Sbjct: 1   MGAATDGAEIVKLSKEHAELRPVAEAVQALAKLAAERADLEEMTA----DPEMAAMVSDE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           + A+++++  +E E+  +L P+D D++ S ILE+RAGTGG EAALF GDLFRMY+RYA L
Sbjct: 57  IQALDEKLPVMERELALMLAPRDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQL 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + WKVEV S S+ + GGYKEI+A+++G GVF R KFESGVHRVQRVPATEA GR+HTSAA
Sbjct: 117 QGWKVEVDSVSEGEMGGYKEIIASVTGDGVFGRWKFESGVHRVQRVPATEAQGRIHTSAA 176

Query: 203 TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQ 262
           TVAVLPEA +++++I   DIRIDT R+SG+GGQHVN TDSAVRITH+PTG++VTSSEKSQ
Sbjct: 177 TVAVLPEAEDVEIEINDADIRIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVTSSEKSQ 236

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           HQNR RAMK L+ARLYD++R  +   RS  RK Q+GSGDRSERIRTYNF QGR+TDHRIN
Sbjct: 237 HQNRARAMKNLKARLYDLQRTALDTARSDARKSQVGSGDRSERIRTYNFPQGRVTDHRIN 296

Query: 323 LTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           LT+Y L  V++G  +DDII PL+   QA  + S  E
Sbjct: 297 LTVYNLPKVMEGDALDDIIKPLIAEDQAARLASLEE 332


>gi|56965632|ref|YP_177366.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
 gi|61214582|sp|Q5WB55|RF1_BACSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56911878|dbj|BAD66405.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
          Length = 356

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 162/357 (45%), Positives = 238/357 (66%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +++R+  +  ++S+   +    KL   ++E A I   +     Y Q  ++  D
Sbjct: 1   MLERLQAVEDRYEYLNEQLSDPNVISNATKLREYSKEQAQIEETVQTYRQYKQVTEQLAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D ++  + + E+  + +   ELE  +  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKAMLEEKLDD-DMYQMVKEELDELSERKAELEERLKILLLPKDPNDDKNVIVEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  DL++MY RYA ++ WK EV+ +   + GGYKEI+  ++G G +S++K+E+G
Sbjct: 120 GDEAQLFAADLYKMYHRYAEMQGWKTEVIEAHATELGGYKEIIFMVNGSGAYSKLKYENG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +DIR+DT  +SG GGQ VNTT 
Sbjct: 180 AHRVQRVPQTESGGRIHTSTATVAVLPEAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PT  +V    EKSQ +N+ +AMKVLRAR++D  ++    E + +RKL +G+G
Sbjct: 240 SAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARIFDKVQQEAQAEYAESRKLAVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF Q R+TDHRI LTL KLE VLQG +D+II+ L+ A Q++ +  A E
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLQKLEQVLQGKLDEIIDALVVADQSEAMKKAEE 356


>gi|218886539|ref|YP_002435860.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226739101|sp|B8DLL6|RF1_DESVM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63852197|dbj|BAD98449.1| peptide release factor 1 [Desulfovibrio vulgaris]
 gi|218757493|gb|ACL08392.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 357

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 188/354 (53%), Positives = 256/354 (72%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +L+ RF ++E +++ S   +    Y KLT+ +A +  ++     Y + +Q   D   
Sbjct: 4   KLENLERRFEDLEQQLASSEVFNDQDRYRKLTKAHADLKEVVDVFRRYKELRQNLADNKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D EIR +A  E  ++E  I E+E E+  LLLPKD  D+K+ I+EIRAGTGG E
Sbjct: 64  LLDDA--DPEIRSMAHEEAKSLESAIPEIEQELQLLLLPKDPLDEKNTIVEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY RYA +R WKVE+LS++++D GGYKE++A I G  V+SR+KFESG HR
Sbjct: 122 AALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVYSRLKFESGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSAATVA+LPEA E+DV+I  +DIRID  RASG+GGQHVN T+SAV
Sbjct: 182 VQRVPATESQGRIHTSAATVAILPEAEEVDVEIRPDDIRIDVFRASGAGGQHVNKTESAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+P+GI+V    EKSQH+N+ +AMKVL +RL   E+ R  NE +A+R+ Q+GSGDRS
Sbjct: 242 RITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHNEMAADRRSQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR+TDHRINLTLY L+ V++G    + + L T  Q + + + ++
Sbjct: 302 ERIRTYNFPQGRVTDHRINLTLYSLDRVMEGEAQALFDALSTHAQTEALKAQAD 355


>gi|295105440|emb|CBL02984.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
           prausnitzii SL3/3]
          Length = 361

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 230/354 (64%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  +  RF E+ +R+++  +      + KL  EY    P++     +            
Sbjct: 7   RMDAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTALDHLAQAKA 66

Query: 65  VIGDHNS-DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++ +  S D + + + Q E+    +++ +LEN +  LLLPKD +D K+ I+EIR+G GG 
Sbjct: 67  LLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIMEIRSGAGGE 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L RMY  YA  R W +E+L+ ++ + GG KE + ++ G G ++R+K+ESGVH
Sbjct: 127 EAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTS ATVAV+P+A E+D  + ++D+RIDT R+SG+GGQH+N T SA
Sbjct: 187 RVQRVPETETQGRIHTSTATVAVMPQAEEVDFALDMKDLRIDTFRSSGAGGQHINKTSSA 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +R+THIPTG +V   +E+SQ QN+ +A+++LR+RL   ++K   +  +A R+ Q+G+GDR
Sbjct: 247 IRVTHIPTGTVVECQNERSQFQNKDKALEILRSRLLAQKQKEQQDAINAQRQGQVGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF Q R TDHRI LT++ LE ++ G +D++I+ L T  Q + +    
Sbjct: 307 SEKIRTYNFPQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQTEKLQKLG 360


>gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
 gi|238688639|sp|B1KDU3|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
          Length = 361

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 249/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S+   +     +  L++EY+ +  ++   + + Q  +
Sbjct: 1   MKDSVIRKLEGLLERNEEVLALLSDPSVIADQERFRALSKEYSQLEDVVKSFTAFQQATE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ +   D E++++AQ E+   +  +  LE+E+  LLLPKD +DD +  +EIR
Sbjct: 61  DLEAAKEMLNE--DDPELKEMAQEEMKEAKSVLETLEDELQILLLPKDPNDDNNAFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY +Y+   +W++EV+++++ + GG+KE++A ISG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSKYSESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VLPE  E + ++I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +E  + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEEESTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYNF QGR++DHRINLTLY+L  V++G +D II PL+  +QA ++ + 
Sbjct: 299 LVSSGDRSERIRTYNFPQGRMSDHRINLTLYRLNEVMEGVLDVIIEPLILENQADLLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|259046347|ref|ZP_05736748.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175]
 gi|259036984|gb|EEW38239.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175]
          Length = 359

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+     R+ E+   +S+   +     +++LT+E A + P +     Y Q  +E  D  
Sbjct: 3   DQLDSFIIRYDELSELLSDPEVIGDTKRFMELTKEEANLRPKVETFKRYQQVVEEISDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+ + D+E+ ++A+ E+ +++KE  ELE++I +LLLP+D +D K+ I+EIR   GG 
Sbjct: 63  EMLGE-SLDAEMAEMAKEELSSLKKEKVELEDKIKFLLLPEDPNDGKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL  MY++YA  + W+VEV+ ++    GGYKE++  I+G  VFS++K+ESG H
Sbjct: 122 EAALFAGDLLTMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GRVHTS ATV V+PEA E+++++  +DIR+D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRVHTSTATVVVMPEAEEVEIELEDKDIRVDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMKVLRAR+YD   +   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL KL+ VL G ID+I++ L+     + +   +
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALILYDHTEKLEQLN 355


>gi|329766951|ref|ZP_08258479.1| peptide chain release factor 1 [Gemella haemolysans M341]
 gi|328837676|gb|EGF87301.1| peptide chain release factor 1 [Gemella haemolysans M341]
          Length = 362

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 236/353 (66%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  ++ R+ ++   +S+   V    KL   ++E  +I   ++    Y    Q+ +D   
Sbjct: 6   QLEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKE 65

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++ Q E+  +E  +  +E E+  LLLPKD +D K+ ++E+R   GG E
Sbjct: 66  LLEIEE-DKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF GDL RMY R+A  + WKV+VL  S+   GG KE++  ISG  V+S+MKFESG HR
Sbjct: 125 AQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEVIFIISGEDVYSKMKFESGAHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+SGR+HTS ATV VLPEA EI++DI   DIR+DT  +SG+GGQ VNTT SAV
Sbjct: 185 VQRVPTTESSGRIHTSTATVVVLPEAEEIEIDINENDIRVDTFASSGAGGQSVNTTMSAV 244

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG++V+   E+SQ +N+ +AMKVLRAR+YD  ++    +  A RK ++G+GDRS
Sbjct: 245 RLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQEEQAKFDAERKSKVGTGDRS 304

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+++  L  A QA+ +   +
Sbjct: 305 ERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQAEKMAELN 357


>gi|239828604|ref|YP_002951228.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
 gi|259585224|sp|C5D9N4|RF1_GEOSW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239808897|gb|ACS25962.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
          Length = 358

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 240/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ R+ ++   + +   ++   KL   ++E + +S  +     Y   +++  +  
Sbjct: 3   ERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLSETVQTYREYKSVRKQLDEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++ + E+  +E++  EL N++  LLLPKD +D+K+ I+EIRA  GG 
Sbjct: 63  AML-EEKLDPEMREMVKEEIDELEQKEEELVNKLKILLLPKDPNDEKNVIMEIRAAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK EV+ +S    GGYKEI+ TI G+G +S++K+E+G H
Sbjct: 122 EAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTIIGKGAYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPE  EI+V+I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVACLPEMEEIEVEINEKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQEARAEYDQTRKQAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ VL G +D+II  L+   Q+K +  A+
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQVLDGNLDEIIEALILDDQSKKLEQAN 355


>gi|87122989|ref|ZP_01078849.1| peptide chain release factor 1 [Marinomonas sp. MED121]
 gi|86161726|gb|EAQ63031.1| peptide chain release factor 1 [Marinomonas sp. MED121]
          Length = 363

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 253/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +R+ E+   +S++  +   D +   ++EYA + P++     + +  +
Sbjct: 1   MKESIKLKLENLADRYEELAALLSDAEIIMNQDLFRAYSKEYAELEPVVKCFEEFQENDE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++ D  SD +I+++   E+ A +    EL  ++  LLLPKD +D ++  +E+R
Sbjct: 61  NLEEAQLMMTD--SDPDIKEMGVEEMKASQIRKEELLLDLQKLLLPKDPNDGRNVFVEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLFRMY RYA  ++WKVE++S ++ + GGYKE++A I G G +S +K
Sbjct: 119 AGTGGDEASIFAGDLFRMYSRYAETQRWKVELISCNEGEHGGYKEVIARIVGEGAYSLLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVPATE+ GR+HTSA TVA++PE  E D ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGVHRVQRVPATESQGRIHTSACTVAIMPEMDEQDAIEINKADLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+THIPTG++V    E+SQH+NR +AM +L +RL   E ++ A E+S  RK 
Sbjct: 239 VNKTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMALLASRLQAAEEEKHAAEQSETRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ ++ G +D+++ PL+  HQA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRVTDHRINLTLYKLDEIITGDLDNLVQPLINEHQAGQLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|261340150|ref|ZP_05968008.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
 gi|288317665|gb|EFC56603.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
          Length = 360

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 247/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCYTDWRQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    E+E ++  LLLPKD DD+++  +E+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE+LS+++ + GG+KE++A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEYQADQLAALSE 358


>gi|295109135|emb|CBL23088.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           obeum A2-162]
          Length = 358

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 247/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF E+   + E     + D + KL +E + + PI+     Y + K+  QD  
Sbjct: 3   DKLEDLLVRFEEVLNELGEPGVTDNQDRFQKLMKEQSELQPIVDTYKEYKENKETIQDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ +     E+R++ + E+   +K + ELE E+  LLLPKD +D K+ I+EIRAG GG 
Sbjct: 63  SMLEEEKD-EEMREMLKEELSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY +YA  R+WK E++S ++N  GG+KE+   I G+G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA EID  + + D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTCTVAIMPEAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A+KVLR+RLY++E  +  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAEAEARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL++L+ +L G +D+I++ L+ A QA  + + +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHRLDAILGGDLDEILDSLIAADQAAKLSTLNE 356


>gi|241890031|ref|ZP_04777329.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
 gi|241863653|gb|EER68037.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
          Length = 362

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 235/353 (66%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  ++ R+ ++   +S+   V    KL   ++E  +I   ++    Y    Q+ +D   
Sbjct: 6   QLEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKE 65

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++ Q E+  +E  +  +E E+  LLLPKD +D K+ ++E+R   GG E
Sbjct: 66  LLEIEE-DKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF GDL RMY R+A  + WKV+VL  S+   GG KE +  ISG  V+S+MKFESG HR
Sbjct: 125 AQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+SGR+HTS ATV VLPEA EI++DI   DIR+DT  +SG+GGQ VNTT SAV
Sbjct: 185 VQRVPTTESSGRIHTSTATVVVLPEAEEIEIDINENDIRVDTFASSGAGGQSVNTTMSAV 244

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG++V+   E+SQ +N+ +AMKVLRAR+YD  ++    +  A RK ++G+GDRS
Sbjct: 245 RLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQEEQAKFDAERKSKVGTGDRS 304

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+++  L  A QA+ +   +
Sbjct: 305 ERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQAEKMAELN 357


>gi|118594305|ref|ZP_01551652.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
 gi|118440083|gb|EAV46710.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
          Length = 359

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 174/362 (48%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+NR  E+   +S       +D Y K+++E++ I P++     + +  +
Sbjct: 1   MKSSMQNKLNALQNRLEELNDELSSEEATKDMDRYKKISKEHSDILPVVDIYQEFTRHTK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  D   ++    SD E++  AQ E+ A + +I  LE ++  LLLPKD +D+K+  LEIR
Sbjct: 61  DMNDAKEML----SDPEMKSFAQDEIDANKAKIIMLEEQLQTLLLPKDPNDEKNIFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG E+ALF GD+FRMY RYA   +W++EV+SS++++ GG+KEI+A + G+G +S++K
Sbjct: 117 AGAGGDESALFAGDIFRMYSRYAERMRWQLEVISSNESEVGGFKEIIAKVIGQGAYSKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAVL       DVDI   DIRIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPDTETQGRIHTSACTVAVLAEADEISDVDINPADIRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH PTGI+V    ++SQH+N+ +AM +L AR+ D +     ++ +  RK 
Sbjct: 237 INKTDSAVRITHAPTGIVVECQDDRSQHRNKAQAMSILAARIKDAQINDQQSKIATERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRSERIRTYNF QGRITDHRINLTLYK+++V+ G + ++I+ L + HQA ++   
Sbjct: 297 LIGSGDRSERIRTYNFPQGRITDHRINLTLYKIDFVMDGDLTELIDNLTSEHQADLLAQL 356

Query: 356 SE 357
            E
Sbjct: 357 DE 358


>gi|171779352|ref|ZP_02920316.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281969|gb|EDT47400.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 359

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   +I D   D E+ ++A+ E+   +    + E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  EDAEEMIKDAGGDPELEEMAKEELKDSKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL +MY++YA  + WK +V+ +S N  GG KE++  +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVIVMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILFDQTKKLEELN 358


>gi|262038076|ref|ZP_06011481.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264]
 gi|261747896|gb|EEY35330.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264]
          Length = 359

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 244/356 (68%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ D+  +  E+   + +   +    K+    +   +I  ++ K + Y  +K+E + L 
Sbjct: 3   QKLDDVVLKHEELTRLLMDPEVISDPKKIMEYNKALNSIDEVVKKYTYYKSRKEEMESLK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +     D E++++   E+  IE+EI  LE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  EDLK-AEKDPEMKEMMLEEIHTIEEEIPGLEEELKILLLPKDPNDDKNVIMEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  D+FRM+ RYA   +WK E++  S+   GG KE+   I G G +SR+KFESGVH
Sbjct: 122 EAALFAADVFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGNGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVPATEASGR+HTS  TVAVLPE  +  +V+I   D++IDT R+SG+GGQHVNTTDS
Sbjct: 182 RVQRVPATEASGRIHTSTITVAVLPEIEDVNEVEINQSDLKIDTYRSSGAGGQHVNTTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG++V +   +SQ +NR  AMKVL ++LY++E ++   E  + R+ Q+GSGD
Sbjct: 242 AVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRKEVESERRSQVGSGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSE+IRTYNF QGR+TDHRI LTL++LE VL G +D++I+ L+   QA+++ +  +
Sbjct: 302 RSEKIRTYNFPQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYDQAELLKAVGD 357


>gi|294501881|ref|YP_003565581.1| peptide chain release factor 1 [Bacillus megaterium QM B1551]
 gi|294351818|gb|ADE72147.1| peptide chain release factor 1 [Bacillus megaterium QM B1551]
          Length = 355

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 240/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ ++   +S+   V+   KL   ++E + I   ++    Y   K++  +  
Sbjct: 3   DRLEAVEARYEKLNELLSDPEIVNNPSKLREYSKEQSDIQQTVAAYQEYKDVKEQLSEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           T++ D   D+++RD+ + E+  +E +  EL  ++  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 63  TMLEDK-LDADMRDMVKEEIAELETQQEELVEKLRILLIPKDPNDDKNVIMEVRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY R+A  + WK EV+ ++    GGYKEI+  I+G+G +S+MKFE+G H
Sbjct: 122 EAALFAANLYRMYSRFAESQGWKTEVMEATTTGVGGYKEIIFMINGKGAYSKMKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPEA E++VDI  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PT  +V    EKSQ +N+ +AMKVLRAR+YD  ++    E  A RK  +GSGDR
Sbjct: 242 VRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQREAQAEYDATRKQAVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D+II+ L+   QA+ +  ++
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEIIDALVMEDQARRMEDSN 355


>gi|302339534|ref|YP_003804740.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
 gi|301636719|gb|ADK82146.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
          Length = 355

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 251/354 (70%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  + +RF EIE R+ E  ++     Y +L++E+AA+   + +   Y +     ++
Sbjct: 1   MIDKLESIASRFTEIEERLGEPDTMKDMHLYKELSQEHAALKDTVEEFGHYKELLSGIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E+R++A++E+  ++  + + E  +  LL+PKD  D K+ I+EIRAGTG
Sbjct: 61  TKQLL-ESESDHEMREMAEVELEELKDHLEKSEKRLKTLLVPKDPLDGKNTIIEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  DL+RMY R++  + WK+E++ SSD + GG+KE++ +ISG+ V+  +++ESG
Sbjct: 120 GDEASLFAADLYRMYSRFSEQKGWKLEMMESSDTEVGGFKEVIFSISGKEVYGNLRYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP+TE+ GR+HTSA TVAVLPEA + D+DI  ED++ID  R+SG GGQ VNTTD
Sbjct: 180 VHRVQRVPSTESQGRIHTSAVTVAVLPEAEKTDIDISPEDLKIDVFRSSGPGGQSVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++V    EKSQ +N+ +A++VLRARLY+ E  +   ER   RK QIGSG
Sbjct: 240 SAVRVTHIPTGVVVTCQDEKSQLKNKAKALRVLRARLYEAEEMKQRKERDQARKSQIGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF Q R+TDHRINLTLYKL+ V++G ++++I+ L  +   +++  
Sbjct: 300 DRSERIRTYNFPQNRVTDHRINLTLYKLDQVMEGALNELIDALKLSITEELLKQ 353


>gi|146311983|ref|YP_001177057.1| peptide chain release factor 1 [Enterobacter sp. 638]
 gi|166977363|sp|A4WBC6|RF1_ENT38 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145318859|gb|ABP61006.1| bacterial peptide chain release factor 1 (bRF-1) [Enterobacter sp.
           638]
          Length = 360

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 165/355 (46%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++   D +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAATIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    E+E ++  LLLPKD DD+++  +E+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELQEAKARAEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL +R+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLT+Y+L+ +++G +D +I P++  +QA  + + ++
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTIYRLDEIMEGKLDSLIEPIVQEYQADQLAALAD 358


>gi|319942226|ref|ZP_08016542.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
 gi|319804279|gb|EFW01171.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 230/354 (64%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  EI+  ++       ++ +  L+ E   I PI+ ++  Y++ + +      
Sbjct: 9   KLSALSRRLEEIDRMLAAPETAADMNLFRDLSRERGEIEPIVGRLHAYERAESDLAAAQE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D E++  A  E  A   E+  +E E+   LLPKD +DD++  LEIRAGTGG E
Sbjct: 69  LAA----DPEMKAFAAEESAAATHELERIEQELRIALLPKDPNDDRNIFLEIRAGTGGDE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +ALF GDL RMY RYA    W+ E++S ++++ GGYKE++  I GRG +S++KFESG HR
Sbjct: 125 SALFAGDLLRMYLRYAEGHGWQTEIVSKNESELGGYKEVIVRIIGRGAYSKLKFESGGHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAVLPE     +V +   D+RID  RASG+GGQH+  TDSA
Sbjct: 185 VQRVPATESQGRIHTSACTVAVLPELDEIEEVKLNPADLRIDVFRASGAGGQHIQKTDSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG++V    E+SQ QN+ RAM VL +RLY  +        ++ RK  IGSGDR
Sbjct: 245 VRITHLPTGMVVECQDERSQTQNKARAMAVLASRLYAQQVAEQHEREASERKNLIGSGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ QGR+TDHRINLTLY+LE ++ G +++II  L T HQA  +   +
Sbjct: 305 SERIRTYNYPQGRVTDHRINLTLYRLEAIMNGDLEEIITALTTEHQAAALAELA 358


>gi|282859526|ref|ZP_06268631.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010]
 gi|282587754|gb|EFB92954.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010]
          Length = 370

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 138/361 (38%), Positives = 216/361 (59%), Gaps = 13/361 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L+ RF E+   +++   +     Y+KLT EY  +  I+     Y       ++  
Sbjct: 9   DKLDGLEARFEEVSTLITDPDVIGDQARYVKLTREYKDLGDIMDARKRYIACLSTIKEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD +++++A+ E+   E    +LE EI  LL+PKD +D K+  +E+RAGTGG 
Sbjct: 69  DILA-NESDPDMKEMAREELSENETLQPKLEEEIKILLVPKDPEDAKNVQMEVRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GD+F MY+R+   + W + V   ++   GG+KEI   +SG GV+  +K+ESGVH
Sbjct: 128 EAALFAGDIFNMYKRFCDKKGWTLSVTDVNEGAVGGFKEIDFAVSGDGVYGILKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+T+  GR+ TSAATVAVLPEA   +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPSTDTQGRMQTSAATVAVLPEADRFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ +  RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIANRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGR+TDHRI  T + L   + G I ++I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNYPQGRVTDHRIGYTTHDLPGFMNGNIQEMIDALTVAENAEKMKE 367

Query: 355 A 355
           A
Sbjct: 368 A 368


>gi|304397559|ref|ZP_07379436.1| peptide chain release factor 1 [Pantoea sp. aB]
 gi|304354731|gb|EFM19101.1| peptide chain release factor 1 [Pantoea sp. aB]
          Length = 360

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 162/361 (44%), Positives = 248/361 (68%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+E  + ++  +     +  L+ EYA ++ +      + Q ++
Sbjct: 1   MKTSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+RD+AQ E+    ++   LE ++  LLLPKD DD+++C +E+R
Sbjct: 61  DIETAQQML----DDPEMRDMAQEELQEAREKNDVLEQQLQVLLLPKDPDDERACFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A ++G G + R+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIARVTGDGAYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL +R++  E  R     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARRHAAEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLT+Y+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTIYRLDEVMEGKLDSLIEPIVQEYQADQLAAL 356

Query: 356 S 356
           +
Sbjct: 357 A 357


>gi|227529623|ref|ZP_03959672.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
 gi|227350413|gb|EEJ40704.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
          Length = 362

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 159/360 (44%), Positives = 240/360 (66%), Gaps = 6/360 (1%)

Query: 1   MVFLSH-KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKK 56
           M       ++  + +R+ E+   +S+   +     ++KL++E  ++   + K + Y +  
Sbjct: 1   MEMAEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKKVT 60

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           Q   D   ++ + + D ++ +L + E+ + + +  +LE E+  LL+PKD +DDK+ I+EI
Sbjct: 61  QTISDDEELLRE-SDDPDLTELTKDELSSAKDQQAKLEKELEILLIPKDPNDDKNIIMEI 119

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           R   GG EA+LF  DL+ MY  YA  + WKVEV+  S+ + GG+KEI   I+G  V+S++
Sbjct: 120 RGAAGGDEASLFAADLYNMYLHYAENQGWKVEVVDKSETEVGGFKEIALMITGDKVYSKL 179

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           KFE+G HRVQRVP TE++GRVHTS ATV V+PEA ++DVDI  +DIR+D  R+SG+GGQH
Sbjct: 180 KFENGAHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQH 239

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T SAVR+TH+PTGI+V    E+SQ QNR +AM++L++R+YD  +++  +   A RK 
Sbjct: 240 VNKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQSAYDAKRKD 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IG+GDRSERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II  L+ A Q K +   
Sbjct: 300 AIGTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMSGDLDEIIEALIVADQTKKLEQL 359


>gi|167750775|ref|ZP_02422902.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
 gi|167656210|gb|EDS00340.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
 gi|291530723|emb|CBK96308.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           siraeum 70/3]
 gi|291557765|emb|CBL34882.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           siraeum V10Sc8a]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 154/356 (43%), Positives = 235/356 (66%), Gaps = 4/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++   + RF EI  ++++   ++    Y  L +E   ++PII K  +Y   + + ++
Sbjct: 1   MTEKLEITEKRFDEINEKLTDINVINDQEQYKSLMKELKNLTPIIEKYRMYKTARSDFEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D + +++ Q +  + +K + E  +E+  LLLPKD DDD++ I+EIR G G
Sbjct: 61  AEQMLSDGGLDKDFKEIVQEQYESNKKLMDEYTDELKILLLPKDPDDDRNVIIEIRGGAG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF   +FRMY  YA  + WK EV+SS+  + GGYKEI  ++ G GV++++K+ESG
Sbjct: 121 GEEAALFANSMFRMYSMYAQTKGWKTEVISSNPTELGGYKEISFSVEGEGVYAKLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+ TS  TVAVLPE  E+DV+I   D+   T R+SG+GGQH+N T+
Sbjct: 181 VHRVQRVPETEAQGRIQTSTITVAVLPEVEEVDVEINPADLEFQTYRSSGAGGQHINKTE 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+RI H PTG++V    E+SQ++N+ +AMK+L ++LY+ +     ++ +A RK+Q+G+G
Sbjct: 241 SAIRIIHHPTGVVVECQEERSQYKNKDKAMKMLYSKLYEAKLNEQNSKIAAERKIQVGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ Q R+TDHRI LTLYKLE  + G  D++ + L  A +   + +  
Sbjct: 301 DRSERIRTYNYPQSRVTDHRIGLTLYKLEQFMNGDCDEVFDALAIADRTAKLAAGG 356


>gi|126653461|ref|ZP_01725557.1| peptide chain release factor 1 [Bacillus sp. B14905]
 gi|126589817|gb|EAZ83950.1| peptide chain release factor 1 [Bacillus sp. B14905]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 238/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+  +   +S+   V+   KL   ++E + I   +     Y   K++  D  
Sbjct: 3   DRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDSYREYKNVKEQLVDTR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D ++ ++ + E   ++ +  ELE  +  LL+PKD +D+K+ I+EIR   GG 
Sbjct: 63  EML-DSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDLFRMY RYA  + WK++++ ++ N  GGYKE++  I+G+G +S+ KFE+G H
Sbjct: 122 EANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTS ATVA LPE  E+DV+I  +DIR+DT  +SG+GGQ VNTT SA
Sbjct: 182 RVQRVPATESQGRIHTSTATVACLPEVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V+   E+SQ +NR +AMK+LRAR+ D+  +    E  A RK  +GSGDR
Sbjct: 242 VRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQKEIDATRKSAVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   QA  +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGRLDEIIDTLILEEQASKLERLND 356


>gi|56552405|ref|YP_163244.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761553|ref|ZP_04759640.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753918|ref|YP_003226811.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|81598182|sp|Q5NMC7|RF1_ZYMMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56543979|gb|AAV90133.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241373861|gb|EER63394.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258553281|gb|ACV76227.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 184/360 (51%), Positives = 254/360 (70%), Gaps = 5/360 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M+ +S  ++  +  R  E++  M+      +  + L+ EY+ + P+        + ++E 
Sbjct: 1   MIAISPDRLAAIIARREELQAEMARPDLDSNRLVALSREYSEVEPVALAAENVGRLREEG 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + L  +  D   D E++ +A  E+ A +  + E E  +   LLP+D  D++S ILEIRAG
Sbjct: 61  ETLEAMTKD--DDPELQAMAVEELEANKTALAEAERALALSLLPRDAADERSAILEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDL RMY RYA    W+VE++S+S  + GGYKE+V +I+G GVF+R+KFE
Sbjct: 119 TGGDEAALFGGDLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVISITGAGVFARLKFE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTSAATVAVLPEA E+DVDI   D+RID  R+SG GGQ VNT
Sbjct: 179 SGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVDIDERDLRIDIFRSSGPGGQSVNT 238

Query: 240 TDSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIP+GI+V+  + KSQH+N+ +AMKVLRARLY+ ER+R+ +ER+  RK  +G
Sbjct: 239 TDSAVRITHIPSGIVVSQQDEKSQHKNKAKAMKVLRARLYERERERLHSERAGQRKSMVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF QGR+TDHRINLTL++L  +L G  +D++I+ L+   +A+ + S  +
Sbjct: 299 SGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILAGPGLDEVISALIAEDEAERLASLDD 358


>gi|331701218|ref|YP_004398177.1| peptide chain release factor 1 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128561|gb|AEB73114.1| Peptide chain release factor 1 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 360

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 241/353 (68%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E A +   ++    Y +  ++  D  
Sbjct: 6   DKLQSVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAFKKYQKVSKQLDDDK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D ++  + + E+ ++  E  +LE+++  +LLPKD +DDK+ I+EI    GG 
Sbjct: 66  EMLREKIDD-DLEAMVKDEITSLTDEKDKLEDQMKVMLLPKDPNDDKNIIMEIHGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E +LF  DLF MY +YA  + WKVE++  ++ + GG+KEIV  I+G  V+S++K+E+G H
Sbjct: 125 EGSLFAADLFSMYSKYAERQGWKVEIIDKNETEVGGFKEIVLMITGDKVYSKLKYENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 185 RVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AMK+L+AR+YD   ++  ++ +A RK  IG+GDR
Sbjct: 245 VRMTHLPTGIVVAMQDERSQQQNRQKAMKILKARVYDYYAQQEQDQYNAERKSAIGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II+ L+ + QAK + + 
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVSDQAKKLENL 357


>gi|148653259|ref|YP_001280352.1| peptide chain release factor 1 [Psychrobacter sp. PRwf-1]
 gi|172048528|sp|A5WFG1|RF1_PSYWF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148572343|gb|ABQ94402.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter sp.
           PRwf-1]
          Length = 364

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 169/361 (46%), Positives = 252/361 (69%), Gaps = 6/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  + +RF E+   +S+  ++   + + +L+ E++ +S I +    Y Q + 
Sbjct: 1   MKDSLRERLDQMVDRFEEVTALLSDPDTISDNNKFRELSMEHSELSEITALWQRYRQAEI 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +++D   +I D  SD +++++ Q E+ +  ++I  +E E+N ++LPKD +D     LEIR
Sbjct: 61  DKKDAQEMINDA-SDPDMKEMMQEEIDSASRDIEAMEEELNVMMLPKDPNDKVPAFLEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMYERYA+ + W +EVLS+++ + GGYKEI++ +SG  V+ R+K
Sbjct: 120 AGTGGDEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIISRVSGNDVYGRLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAV+PE    D  ++   DIR+DT R+SG+GGQH
Sbjct: 180 FESGAHRVQRVPETESQGRVHTSACTVAVMPEVEIDDTVELNPADIRMDTFRSSGAGGQH 239

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVR+THIPTG++     E+SQH+NR +AM++L AR+   + +   +   A R+ 
Sbjct: 240 VNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADALRRN 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G + ++++ L   HQA ++ S 
Sbjct: 300 LVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDAIMEGDLTELLDALNREHQADLMASI 359

Query: 356 S 356
            
Sbjct: 360 G 360


>gi|88657945|ref|YP_507408.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
 gi|119361539|sp|Q2GGM5|RF1_EHRCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88599402|gb|ABD44871.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 359

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 182/357 (50%), Positives = 255/357 (71%), Gaps = 4/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP--SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 + +L  +F +++  + +    SVD+++  ++EY+ + P+IS I  Y+  +++  
Sbjct: 1   MSFDNSLEELSQKFYKLKSMLEDPSQLSVDSFVAASKEYSELLPVISVIDQYNILQKDIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            L  +I +  +D E++ LA+ E    +K++ ++++++   LLPKD DD ++ ILEIRAGT
Sbjct: 61  GLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFV DL+RMY +YA  + WK E ++SS    GG+KEI   ISG  VF+R+KFES
Sbjct: 121 GGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCISGSNVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEASGR+HTSAATVAVLPE  E+D+ I  +D+RID  R+SG GGQ VNTT
Sbjct: 181 GVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+GI+V    EKSQH+N+ +A+KVLRARLY++E+++   E S  RK QIGS
Sbjct: 241 DSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRDAEISQMRKSQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSA 355
           GDRSERIRTYNF Q RITDHRINLTLY+L+ ++ +G +D+ I  L+   +A  + + 
Sbjct: 301 GDRSERIRTYNFPQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIAEDEANKLKNL 357


>gi|73662075|ref|YP_300856.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|119361617|sp|Q49Z65|RF1_STAS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72494590|dbj|BAE17911.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 242/353 (68%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+      K ++E A +   +     Y Q K++  ++ 
Sbjct: 3   DQLDIVEERYEQLNEMLSDPDVVNNPDNLRKYSKEQAELQKTVDVYRDYKQTKEDISEVE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   + EI  L +       K  + LE E+ +LL+PKD +DDK  I+EIRA  GG 
Sbjct: 63  EMLRDTKDNDEIEMLKEEHQTLQNKVPK-LEEELKFLLIPKDPNDDKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +YA    +K +++  +++D GGYKEI  ++SG G FS++K+E+G H
Sbjct: 122 EAAIFAGDLFRMYSKYAETLNYKTDIVEVTESDHGGYKEISFSVSGNGAFSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  ++++++  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITHIPTG++ TSSEKSQ QNR +A+KVL+ARL+D++ +    + +A RK  +G+GDRS
Sbjct: 242 VRITHIPTGVIATSSEKSQIQNREKALKVLKARLFDMKLQEEQQKYAAQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL+ +++G +D+II+ L  A Q   +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLAEQTDKLKELN 354


>gi|224477106|ref|YP_002634712.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254790897|sp|B9DMD1|RF1_STACT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222421713|emb|CAL28527.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 246/353 (69%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V    KL   ++E + +   +     Y Q K++  ++ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPDVVSDSNKLREYSKEQSDLQKTVDVYRQYKQNKEDIDEIV 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E  D+ + ++  ++  +  LE E+  LL+PKD +DDK+ ++EIRA  GG 
Sbjct: 63  EMLSET-SDKEEVDMLKADMNELKDTLPGLEEELKMLLIPKDPNDDKNVVVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL+RMY R++    +K  V+  +D+D GG+KEI  TI+G+G +S++K+E+G H
Sbjct: 122 EAAIFAGDLYRMYTRFSEGLGYKTGVIEMNDSDHGGFKEISFTINGQGAYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA +++VDI   D++I+T R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEAEDVEVDIKDADLKIETYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTGI+ TSSEKSQ QNR +A+KVL+AR+YD++ +    +  + RK  +G+GDRS
Sbjct: 242 VRITHLPTGIIATSSEKSQIQNREKALKVLKARVYDMKLQEEQEKYDSERKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L  + Q + +   +
Sbjct: 302 ERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALTMSEQTEKLKELN 354


>gi|58038522|ref|YP_190486.1| peptide chain release factor 1 [Gluconobacter oxydans 621H]
 gi|81557234|sp|Q5FUR9|RF1_GLUOX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58000936|gb|AAW59830.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Gluconobacter
           oxydans 621H]
          Length = 353

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 247/356 (69%), Gaps = 6/356 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
                ++  +  R  E++  MS      + + +L++EYA + P+++ I  +   ++++  
Sbjct: 1   MAFDDRLERIVARSEEVQALMSSGELTGEDFTRLSQEYAELEPVVASIQAWKSAEEQKAG 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E+R+LAQ+E+  IE  + +L++ +   LLPKD  D++S ILEIR   G
Sbjct: 61  AQALL----DDPEMRELAQMELAEIEATLPDLQHALRLALLPKDAADERSAILEIRPAAG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  +LF  Y R++    W+ EV+  ++N+  G KE +ATISGR VF+R+K+ESG
Sbjct: 117 GDEAGLFAAELFDAYRRFSEQNGWRFEVMEYAENEVAGLKEGMATISGRSVFARLKYESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE+ GR+HTS  TVAVLPEA E+DV +  +D+RID  RASG+GGQHVN T+
Sbjct: 177 VHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVTVNDDDLRIDVYRASGAGGQHVNKTE 236

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+P+GI+V    EKSQH+N+ +AMK+LRARLY+ ER ++   R+A+RK Q+G+G
Sbjct: 237 SAVRVTHMPSGIVVAMQEEKSQHKNKAKAMKILRARLYERERAQLHATRAADRKSQVGTG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTLYK++ ++ G  D+II+ L    Q +++ +  
Sbjct: 297 DRSERIRTYNFPQGRVTDHRINLTLYKIDRIMGGEFDEIIDALTREEQTELLAAEG 352


>gi|300920409|ref|ZP_07136843.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
 gi|300412542|gb|EFJ95852.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
          Length = 360

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+ E++S+S+   GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRGEIMSASEGGHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|224538310|ref|ZP_03678849.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520095|gb|EEF89200.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 370

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 146/362 (40%), Positives = 224/362 (61%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMEARKEYIQVLNGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + +D E+R++A+ E+ A +    ELE  I  LL+P D  D K+ ILEIR GTGG 
Sbjct: 69  EIIS-NEADPEMREMAREELDACQARQPELEEHIKLLLVPADPQDSKNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + W++E+ S ++   GG+KE++ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYTKYCETKGWRMEISSVNEGAAGGFKEVICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ ++            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYVWRNPNTGASEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYLDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|254282871|ref|ZP_04957839.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
 gi|219679074|gb|EED35423.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
          Length = 360

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 161/362 (44%), Positives = 248/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L++R  E+   + ++  +     +  L++E++ +  ++     Y + + 
Sbjct: 1   MKASLVSKLEQLRDRHEEVSAMLGDADVISDQNQFRDLSKEFSQLDEVVRVFEAYQRCQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++ D  SD E++ +A+ E+ A E E+  +E ++  LLLP+D  D ++  LEIR
Sbjct: 61  DLSEAREMLKD--SDPEMQSMARDELDAGEPELAAMEEKLQLLLLPRDPRDSQNVYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY+RY+  R W++EV+S    + GG+KEI++ I G  +++ +K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYQRYSESRGWRIEVISERPGEHGGFKEIISRIQGDDIYAHLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA+LPE     D++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAILPEPDAVEDIEINKADLRVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+P+GI+V    E+SQH+NR RAM +L+A+L     ++ A E++  R+ 
Sbjct: 239 VNTTDSAVRITHLPSGIVVECQDERSQHKNRARAMSLLQAKLASASEQQAAAEQAEERRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+RIRTYNF QGR++DHRINLTLYKL+ V++G +D +I PL   +QA ++ + 
Sbjct: 299 LVGTGDRSDRIRTYNFPQGRVSDHRINLTLYKLDEVIEGDLDALIQPLRREYQADLLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|325291372|ref|YP_004267553.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966773|gb|ADY57552.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 356

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 172/352 (48%), Positives = 243/352 (69%), Gaps = 5/352 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +++ ++ EI   +S          Y K  +  AAI+ I+     Y +  ++ +D   
Sbjct: 4   RLEEIEKKYDEITELLSNPEIFSDQAAYQKNAKAQAAIAEIVEGFREYKEIFRQLKDAQA 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   DSE+R+ AQ E+  ++    E E ++  LLLPKD +D+K+ I+EIRAG GG E
Sbjct: 64  LL-EEELDSEMREFAQSEIDELQNRKEEYEEKLKILLLPKDPNDEKNVIMEIRAGAGGEE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDL++MY RYA  + WK E+LS+S  D GG+KEI+  + GRG +S +K+ESGVHR
Sbjct: 123 AALFAGDLYKMYSRYAEEQGWKTEMLSASYTDIGGFKEIIFMVEGRGAYSMLKYESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P+TE+ GR+HTS ATVAVLPEA ++D++I   +IRID   +SG GGQ VNTT SAV
Sbjct: 183 VQRIPSTESGGRIHTSTATVAVLPEAEDVDIEINPNEIRIDIFCSSGPGGQSVNTTQSAV 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V    EKSQH+N+ +A+KVLRARL +  ++    E +  RK Q+G+GDRS
Sbjct: 243 RVTHIPTGIVVSCQDEKSQHKNKDKALKVLRARLLEKAQQEAMGEIAQERKSQVGTGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           ERIRTYNF QGR++DHRI LTL+KLE +L G I +II+ L+   Q + + SA
Sbjct: 303 ERIRTYNFPQGRVSDHRIGLTLHKLENILLGDIQEIIDALIAKDQEERLKSA 354


>gi|330994789|ref|ZP_08318711.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
 gi|329758050|gb|EGG74572.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
          Length = 353

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 171/348 (49%), Positives = 245/348 (70%), Gaps = 5/348 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           ++  +  R  E++  ++E  S   + + + EYA + PI+++++     ++ E+D   ++ 
Sbjct: 7   RLDRIVARCDELQALLAEGLSGADFSQASREYAELEPIVARVNALRAAEEAERDASQMLA 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D E+R+LAQ E+ A+  +I  L ++I   +LP+D  D++S ILEIR   GG EA L
Sbjct: 67  ----DPEMRELAQAELDALRTQIPTLRHDIRLAMLPRDEADERSAILEIRPAAGGDEAGL 122

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F  +LF  Y+RYA LR W+ EVL    ++ GG +E +A+I+GRGVF+R+K+ESGVHRVQR
Sbjct: 123 FAAELFGAYQRYADLRGWRFEVLEYDQSELGGLREGIASITGRGVFARLKYESGVHRVQR 182

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           VPATE+ GR+HTS  TVAVLPEA E+DV++   D+RID  RASG+GGQHVN T+SAVRIT
Sbjct: 183 VPATESQGRIHTSTVTVAVLPEAEEVDVEVNEGDLRIDVYRASGAGGQHVNKTESAVRIT 242

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PT I+V    EKSQH+NR +AMK+LRARLY+  R      R+A+R+ Q+G+GDRSERI
Sbjct: 243 HLPTNIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAHETRAADRRAQVGTGDRSERI 302

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RTYNF QGR+TDHRI LTLYK++ V+ G +D+ ++ L    QA ++ +
Sbjct: 303 RTYNFPQGRVTDHRIGLTLYKIDRVMAGELDEFVDALTQEEQAALLAA 350


>gi|308186585|ref|YP_003930716.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
 gi|308057095|gb|ADO09267.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
          Length = 360

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 163/361 (45%), Positives = 248/361 (68%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+E  + ++  +     +  L+ EYA ++ +      + Q ++
Sbjct: 1   MKTSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+RD+AQ E+    ++   LE ++  LLLPKD DD+++C +E+R
Sbjct: 61  DIETAQQML----DDPEMRDMAQEELQEAREKSDVLEQQLQVLLLPKDPDDERACFIEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A ++G G + RMK
Sbjct: 117 AGTGGDEAAIFAGDLFRMYSRYAEARRWRVEIVSANEGEHGGYKEVIARVTGDGAYGRMK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL +R++  E  R     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARRHAAEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLT+Y+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTIYRLDEVMEGKLDSLIEPIVQEYQADQLAAL 356

Query: 356 S 356
           +
Sbjct: 357 A 357


>gi|225575054|ref|ZP_03783664.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037724|gb|EEG47970.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
           10507]
          Length = 357

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 238/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF E+   + E    D    + KL  E + + PI+     Y + +Q  QD  
Sbjct: 3   DKLEDLLIRFEEVLSELGEPGVADNQERFQKLMREQSELQPIVDTYKEYKENQQTIQDSV 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ + + +     L +    A  +    LENE+  LLLPKD +D K+ I+EIRAG GG 
Sbjct: 63  SMLEEESDEEMREMLKEELSDAKRRVGE-LENELKILLLPKDPNDSKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY +YA  R+WK E+LS ++N  GG+KE+   I G+G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVA++PEA EID  + L D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAIMPEAEEIDFHLDLNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A+KVLR+RLY++E ++  +  +  R+ Q+G+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELQKQHDAEAEARRSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SE+IRTYNF QGR+TDHRI LTL++LE  L G +D++I+ L+ A QA  + + 
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHRLEGTLNGDLDEVIDSLIAADQAAKLSNL 354


>gi|163756580|ref|ZP_02163692.1| peptide chain release factor 1 [Kordia algicida OT-1]
 gi|161323474|gb|EDP94811.1| peptide chain release factor 1 [Kordia algicida OT-1]
          Length = 357

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 156/357 (43%), Positives = 230/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K RF E+   + +   +     Y++L +EY  +  ++ K  +Y +      +
Sbjct: 1   MLEKLQIVKQRFDEVNDLIIQPDIIADQKRYVQLNKEYKDLKILVEKRDVYKELLDNISE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+E+ ++A+I++   +  +  LE EI  LL+PKD +D K+ ++E+RAGTG
Sbjct: 61  AEEIIAD-GSDAEMVEMAKIQMDEAKAALPALEEEIKVLLIPKDPEDSKNVVVEVRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDL RMY +Y   R W V V+  S+   GG+KEI+  +SG  V+  MKFE+G
Sbjct: 120 GDEASIFAGDLHRMYTKYCEGRGWNVSVVDYSEGTSGGFKEIIFEVSGEDVYGTMKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV++ + D+RI+   ++G GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVELDMNDVRIERTTSTGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+R+ H P+G++V    +KS H+N  +A+KVLR+RLY+ E ++     SA RK  + SG
Sbjct: 240 SAIRLHHGPSGLVVSCQDQKSSHKNLEKALKVLRSRLYEKELEKKLAADSARRKSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+ QGR+TDHRI LTLY L  ++ G I  II+ L+     + +  +SE
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLSNIMNGDIQKIIDELMLVENTEKLKESSE 356


>gi|313203258|ref|YP_004041915.1| bacterial peptide chain release factor 1 (brf-1) [Paludibacter
           propionicigenes WB4]
 gi|312442574|gb|ADQ78930.1| bacterial peptide chain release factor 1 (bRF-1) [Paludibacter
           propionicigenes WB4]
          Length = 361

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 235/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+++F EI   +++   +     ++KL +EY  +  I++  + Y+       +  
Sbjct: 8   EKLEGLQHKFEEISTLITDPSVITDQKRFVKLNKEYHDLEMILNAKNEYEMALAHLAEAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+R++A+ EV +IE  I E+E  I  LL+P D +D+K+ I+EIR GTGG 
Sbjct: 68  ELL-DTESDPEMREMAKAEVDSIEPIIPEMEENIKLLLIPADPEDNKNAIVEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLF+MY +Y   + W++E+ + S+   GGYKEI+ T++G  V+  +K+ESGVH
Sbjct: 127 EAAIFAGDLFKMYTKYCETKGWRLEITNISEGTAGGYKEIIFTVTGENVYGTLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTSAATVAVLPE  E D ++   D+R+DT  +SG+GGQ VNTT SA
Sbjct: 187 RVQRVPQTETQGRVHTSAATVAVLPEMEEFDYELKESDVRVDTFCSSGAGGQSVNTTYSA 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +R+ HIPTG  V    EKSQH+N+ +AM  LR+RLY +E ++  +E  + RK  + +GDR
Sbjct: 247 IRLVHIPTGTTVQCQDEKSQHKNKAKAMNELRSRLYAIEHQKYLDEIGSKRKTMVSTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S +IRTYN+ QGRITDHRIN T+Y L   + G I  +I+ L+ A  A+ +  + 
Sbjct: 307 SAKIRTYNYPQGRITDHRINFTIYNLSAFMGGDIQGVIDQLIVAENAERLKESE 360


>gi|297184082|gb|ADI20201.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 360

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 160/361 (44%), Positives = 239/361 (66%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M  +   ++  +  R+ E+   + +   +     Y++L  EY  + P++   S Y +   
Sbjct: 1   MAMI--DKLNVIFQRYNEVNDLIIQPDVISDSKRYVQLNREYKNLKPLVEVRSQYLELSS 58

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   V+ +   D++ R++A++E+  +E     LE E+  LLLPKD +DDK+ ++EIR
Sbjct: 59  RIEEAKGVLKEEK-DADFREMAKMELDELEPTFEALEEEVKLLLLPKDPEDDKNALVEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
            G GG E A+F GDLFRMY+RY   R WKV VL+ ++   GG+KE+   ++G  V+  +K
Sbjct: 118 QGAGGDEGAIFAGDLFRMYQRYCEGRGWKVAVLTMNEGSSGGFKEVSFEVNGESVYGILK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESGVHRVQRVPATE+ GRVHTSAA+V VLPEA E+DVD+ ++D++ DT R+ G+GGQHV
Sbjct: 178 YESGVHRVQRVPATESQGRVHTSAASVVVLPEAEEVDVDLDMKDVKKDTYRSQGAGGQHV 237

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N T+SAVR+TH+PTGI+V     +SQH+N  +A+KVLR+R++D+E K+   E++A RK  
Sbjct: 238 NKTESAVRLTHLPTGIVVECQDGRSQHKNYEQALKVLRSRMFDMEFKKKQEEQAAQRKTM 297

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + +GDRS +IRTYN+ QGR+TDHRI LT Y L  V+ G I   I+ L  A  A+ +   S
Sbjct: 298 VSTGDRSAKIRTYNYPQGRVTDHRIGLTSYNLNDVVNGDIQKFIDELHMAENAEKMKEGS 357

Query: 357 E 357
           +
Sbjct: 358 D 358


>gi|281420644|ref|ZP_06251643.1| peptide chain release factor 1 [Prevotella copri DSM 18205]
 gi|281405417|gb|EFB36097.1| peptide chain release factor 1 [Prevotella copri DSM 18205]
          Length = 369

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 142/360 (39%), Positives = 217/360 (60%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++R+ E+   +++   +     Y+KLT+E+  +  I+     Y       ++  
Sbjct: 8   QKLEGLESRYEEVSTLITDPDVIADQPRYVKLTKEWKDLGDIMDARKRYINCLNSIKEAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD E++++A+ E+   E    +LE EI   L+PKD +D K+  +EIR G GG 
Sbjct: 68  DILA-NESDPEMKEMAREELNENEALQPKLEEEIKIALVPKDPEDAKNVQMEIRGGAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++Y   + W V V S S+   GGYKEI   +SG  V+  +K+ESGVH
Sbjct: 127 EAALFAGDLFNMYKKYCESKGWTVSVTSVSEGAVGGYKEIDFAVSGTDVYGTLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 187 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 246

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   ++D E ++  ++ ++ RK
Sbjct: 247 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYVDDIASRRK 306

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L   L G I D+I+ L  A  A+ +  
Sbjct: 307 SLVSTGDRSAKIRTYNFPQGRVTDHRIGYTTHDLNGFLAGDIQDMIDALTVAENAEKLKE 366


>gi|124265716|ref|YP_001019720.1| peptide chain release factor 1 [Methylibium petroleiphilum PM1]
 gi|166223569|sp|A2SD46|RF1_METPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|124258491|gb|ABM93485.1| bacterial peptide chain release factor 1 (bRF-1) [Methylibium
           petroleiphilum PM1]
          Length = 359

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 168/361 (46%), Positives = 233/361 (64%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R AE++  +++   +     +  L+ E+  +S I+ +   + Q+++
Sbjct: 1   MKPALRLQLDRYVRRLAELDSLLADPAVMRDAGGFRALSREHVEVSGIVERQRRHAQRER 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     SD E+  +A  E  + + E+  L  E+  LLLP+D DD +S  LEIR
Sbjct: 61  DLAAAAEMA----SDPELAAMAAEEAASAQAELDRLATELQRLLLPRDPDDARSVFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  + W+VE+LS+SD++ GGYKE+VA I G  VF  +K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYAERKGWRVELLSASDSELGGYKEVVARIEGDAVFGHLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           +ESG HRVQRVPATE  GR+HTSA TVAVL       +V +   D+RIDT RASG+GGQH
Sbjct: 177 YESGGHRVQRVPATETQGRIHTSACTVAVLAEPDEAQEVTLNPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITH+PTG++     ++SQH+N+ +AM VL ARL D +R       +A RK 
Sbjct: 237 VNKTDSAVRITHLPTGLVAECQDDRSQHRNKAKAMAVLAARLRDKDRLERQAREAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLY+L  ++ G +D ++  L+ A +A+++   
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYQLGAIMDGDLDPVVKALVAAREAELLAEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|254482800|ref|ZP_05096037.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2148]
 gi|214036881|gb|EEB77551.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2148]
          Length = 361

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 167/361 (46%), Positives = 242/361 (67%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   + ++ ++   D +  L+ EY+ +  ++   + Y Q K 
Sbjct: 1   MKASLLTKLETLTDRHEEVSALLGDNETISDQDKFRDLSREYSELEAVVRCYADYSQVKG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++ D  SD ++R++AQ E+ +    + +LE ++  LLLP+D +D  +  LEIR
Sbjct: 61  DLDEARLMLED--SDPDLREMAQEEIDSGSGRLEQLEAQLQALLLPRDPNDSHNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA    WKVEVLS    + GGYKEI+  + GR V++ +K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAENMGWKVEVLSERHGEHGGYKEIITRVEGRDVYAHLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PEA  +D  +I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAIMPEAEAVDQVEINKADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+P+GI+V    E+SQH+NR RAM +L+A+L    + + A E++  R+ 
Sbjct: 239 VNKTDSAVRLTHLPSGIVVECQDERSQHKNRARAMSLLQAKLLTSAQDKAAEEQAEQRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+RIRTYNF QGR+TDHRINLTLYKL  V++G +  ++ PL   +QA  + + 
Sbjct: 299 LVGTGDRSDRIRTYNFPQGRLTDHRINLTLYKLAEVVEGDLGAVVGPLRQEYQADQLAAL 358

Query: 356 S 356
            
Sbjct: 359 G 359


>gi|317473032|ref|ZP_07932332.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899461|gb|EFV21475.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA]
          Length = 357

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 166/355 (46%), Positives = 248/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L  R   +  ++++       + +  L +E + ++PI+ K   Y Q+KQ  ++  
Sbjct: 3   DKLESLVERLDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEESL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +  SD E+++LA+ E+   +  +  LE E+  LL+PKD +DDK+ I+EIRAG GG 
Sbjct: 63  E-LLEEESDEEMKELAKEELSESKANVERLEEELKILLIPKDPNDDKNIIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  D+ RMY  YA  R+WKVE LS +++  GG+KE+V  ISG+G +SR K+ESGVH
Sbjct: 122 EAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE+ GR+HTS  TVA++PE  +++V++ L D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPATESGGRIHTSTITVAIMPEVEDVEVEVDLNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    EKSQ +N+ +A+KVLR+RLY++E+++  +  +  RK Q+G+GDR
Sbjct: 242 VRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDAEAEKRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+ QGR+TDHRI LTL+KL+ V+ G +D++I+ L  A QA  + +  E
Sbjct: 302 SEKIRTYNYPQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTAADQAAKLSNMEE 356


>gi|144897745|emb|CAM74609.1| peptide chain release factor RF-1 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 352

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 178/357 (49%), Positives = 255/357 (71%), Gaps = 7/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                Q+  +  R+ E+  +++       + +L++E++ I P++  +    + + +  + 
Sbjct: 1   MTLDAQLDKVLYRYDELREQLAAGDGGS-FARLSKEFSDIEPVVHAVQALKKARADMAEA 59

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D +++DLA  E  A+++ +  LE ++  +LLPKD  D+K+ ILE+RAGTGG
Sbjct: 60  EAMMA----DPDMKDLAAEEYYALKETLPGLERDVQLMLLPKDEADEKNAILEVRAGTGG 115

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  +LFRMYERYA++R W+ EV+  ++   GG KE  ATI+GRGVF+R+KFESGV
Sbjct: 116 EEAALFAAELFRMYERYASVRGWRFEVMDVNETGIGGMKEASATITGRGVFARLKFESGV 175

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTSAATVA++PEA E+D+ I  +D+R D  R+ GSGGQ VNTTDS
Sbjct: 176 HRVQRVPATESGGRIHTSAATVAIMPEAEEVDIQIDDKDLRFDVYRSQGSGGQSVNTTDS 235

Query: 243 AVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+THIPTG+ +    EKSQH+N+  AMK+LRARLY++ER   A ER+ANRK Q+GSGD
Sbjct: 236 AVRVTHIPTGLAVACQQEKSQHKNKATAMKLLRARLYEMERASKAAERAANRKSQVGSGD 295

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGR+TDHRINLTLYK++ ++ G  +D++ + L+ A QA+ +   +E
Sbjct: 296 RSERIRTYNFPQGRVTDHRINLTLYKIDDMMNGTALDEVADALIAADQAERLAEMAE 352


>gi|254515300|ref|ZP_05127361.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
 gi|219677543|gb|EED33908.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
          Length = 361

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 163/361 (45%), Positives = 233/361 (64%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   + +   +   D + +L+ EY+ +  ++     Y     
Sbjct: 1   MKPSLLLKLETLSERHEEVSALLGDPGVIADQDQFRQLSREYSELETVVKCFGEYQALLG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +   +++ D   D+++R++A+ E+   E     LE E+  LLLP+D  D  +  LEIR
Sbjct: 61  DIEAAQSMLAD--DDADMREMAKAEISEGEARREALEAELQVLLLPRDPRDSHNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDL RMY R+A  + W++EVLS    + GGYKEI++ I G  V++ +K
Sbjct: 119 AGTGGDEAAIFSGDLQRMYTRFAERQGWRLEVLSERPGEHGGYKEIISRIEGTDVYAYLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA+L E  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAILAEPEELEAIEINKADLRVDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+PTGI+V    E+SQH+NR RAM +L+A+L        A+E++  R+ 
Sbjct: 239 VNKTDSAVRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLTSSAEAAQASEQAEQRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+RIRTYNF QGR+TDHRINLTLYKL+ V+ G +  I+ PL   HQA  + + 
Sbjct: 299 LVGTGDRSDRIRTYNFPQGRVTDHRINLTLYKLDEVMAGDMVSIVGPLRQEHQADQLAAM 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|157803730|ref|YP_001492279.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
 gi|166223597|sp|A8EYR1|RF1_RICCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157784993|gb|ABV73494.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
          Length = 355

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 246/354 (69%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  ++ KI  Y++ K E ++ 
Sbjct: 1   MSFSDNLAKIVDKYENLGKKLSSGIMGDEFVKASKEYAELEEVVEKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDEADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W  E+L+  D   GGYKE  A+I G+ VFS++K ESGV
Sbjct: 121 EEAALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIKGKDVFSKLKCESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQR+P TE+ GR+HTSAATVAVLPE  ++D+ +  +D+RIDT R+SG+GGQHVNTT+S
Sbjct: 181 HRVQRIPETESHGRIHTSAATVAVLPEVEDVDIKLEDKDLRIDTYRSSGAGGQHVNTTNS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   +R+ NR+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQKRANNRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ ++ L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIADDEAKKLAE 354


>gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
 gi|226739102|sp|B5YDB2|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
          Length = 367

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 180/355 (50%), Positives = 253/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ +++ RF EIE  +++   +     Y  L +E A I  I+ K S Y +  +E +DL 
Sbjct: 8   DKLEEIEKRFKEIENLLTKEEIISDLSRYQSLLKERAKIEEIVEKFSEYKKLLKEREDLE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D ++R LA+ E+  IEK++ ++E ++  LLLPKD +D+K+ I+EIRAGTGG 
Sbjct: 68  VMTKEE-QDEDLRSLAEAELEEIEKKLEKIEFDLKALLLPKDPNDEKNIIMEIRAGTGGE 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY  YA  + WKVE++SS+    GGYKEI+  + G+G +SR+KFESGVH
Sbjct: 127 EAALFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGYKEIIFIVEGKGAYSRLKFESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPE  E+DV+I  +D+RI+T R+ G+GGQHVN T+S 
Sbjct: 187 RVQRVPITESSGRIHTSTATVAVLPEMEEVDVEIDPKDLRIETFRSGGAGGQHVNKTESG 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIP+GI+V    E+SQHQNR +AMKVLRARLY+  ++   NE ++ R+ Q+G+G+R
Sbjct: 247 VRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYYQREKENEIASQRRQQVGTGER 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF Q R+TDHRIN + ++LE VL G +D+ I+ L+ A + + I    E
Sbjct: 307 SEKIRTYNFPQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEKEEQIKKLFE 361


>gi|290580477|ref|YP_003484869.1| putative peptide chain release factor 1 [Streptococcus mutans
           NN2025]
 gi|254997376|dbj|BAH87977.1| putative peptide chain release factor 1 [Streptococcus mutans
           NN2025]
          Length = 359

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 232/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++KL+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDIVSDTKCFMKLSREEANSRETVAVYREYKQVVQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++ +LLLPKD +DDK+ ILEIR  
Sbjct: 61  ADAQEMIKDASDDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + WK EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEELN 358


>gi|297180646|gb|ADI16856.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_13E22]
          Length = 359

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 184/359 (51%), Positives = 250/359 (69%), Gaps = 4/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
               + +  +  R  E+E  ++++ S+  D    L+ E + + P+  +I +  + + +  
Sbjct: 1   MSIEQSMDKVLARRDEVESWLADAASMSPDELASLSRELSELRPVCEQIDLVRRLEGDRD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +  +   D+E+ ++AQ E+  IE  + E  N +  LLLP+D DD ++ ILE+RAGT
Sbjct: 61  AAVMLAEEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLF MY+R+AA   W+ EV+  S+   GGYKE  A I+G  VF+R+KFES
Sbjct: 121 GGDEAALFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA ++D+D+   D+RID  RASG GGQ VNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDVDIDVQDSDLRIDVFRASGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+V+  + KSQH+NR +AMK+LRARLYD ER R+  ER+A+RK Q+GS
Sbjct: 241 DSAVRITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAERAASRKGQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G  +D+++  L+   +A+ +    E
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDRAQRLAEGGE 359


>gi|315641825|ref|ZP_07896829.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
 gi|315482500|gb|EFU73039.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
          Length = 357

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 241/353 (68%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  + +R+ E+   +S+   V     +++L++E A     ++    Y +  Q   D  
Sbjct: 3   DQLQAIADRYEELGELLSDPAVVSDTKRFMELSKEEANTRETVATYRRYKEVVQGIADAE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+ N D+E+ +LA+ E+  ++KE   LE+ I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLGE-NLDAEMAELAKEELSDLKKEKEVLEDTIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+RYA  + W+VEV+ ++    GGYKE++  I+G  VFS++K+ESG H
Sbjct: 122 EAALFAGDLFNMYQRYAESQGWRVEVMDANITGIGGYKEVIMMITGDNVFSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++D+  +DIR+D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVELDLADKDIRVDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMKVLRAR+YD  +    +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQLQHEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L G +D+II+ L+   Q   +   
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEL 354


>gi|237807596|ref|YP_002892036.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
 gi|259585258|sp|C4LBL5|RF1_TOLAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237499857|gb|ACQ92450.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
          Length = 362

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 239/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R+ E++  + E   V   D +  LT EY+ +  +++    Y Q + 
Sbjct: 1   MKETVIRKLEGLMERYEEVQALLGEPNVVSDQDKFRALTREYSQLGEVVAGFQQYQQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q +  ++     D+E++ +AQ E+   ++ I  +E E+  LLLPKD  DD +C LEIR
Sbjct: 61  DLQAIEEMLS--GDDAEMKAMAQEELAEAKQLIERVEAELQVLLLPKDPKDDSNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY +Y+  R W++E++S+SD + GGYKEI+  + G  V+  MK
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSKYSERRGWRMEIMSTSDGEHGGYKEIIVRMEGDSVYGIMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VLPE  E +  +I   D+RIDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVMVLPEIPEKEIPEINPADLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITHIPTG +V    E+SQH+N+ RAM VL ARL   E  +   E  + R+ 
Sbjct: 239 INKTDSAIRITHIPTGTVVECQDERSQHKNKARAMSVLAARLAQQEEDKRRAEADSTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS+RIRTYN+ QGR++DHRINLTLY+L  V++G +D ++ PL   +QA  + + 
Sbjct: 299 ILSTGDRSDRIRTYNYPQGRVSDHRINLTLYRLSEVMEGDLDSLLKPLQQEYQADQLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|300770142|ref|ZP_07080021.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762618|gb|EFK59435.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 364

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 149/357 (41%), Positives = 227/357 (63%), Gaps = 5/357 (1%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQE 58
                 ++  +K R+ E+E  +S   ++     + KL +EY  +S I+ +  IY      
Sbjct: 5   FDFMLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLSKIVDQYHIYKNMVSN 64

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
                 ++  +  D E+R++A+ E+  +  +  E E EI  +L+PKD +D K+ I+EIR 
Sbjct: 65  IDANKDILA-NEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRG 123

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EAALF GDL+RMY R+   + W+ EV+  ++   GGYKE++  + G  V+ ++K+
Sbjct: 124 GTGGDEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGEDVYGQLKY 183

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESGVHRVQRVP TE  GRVHTSAA+VAVLPEA ++DV++   DI + T R+ G+GGQ+VN
Sbjct: 184 ESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEDVDVELNPGDIEMQTSRSGGAGGQNVN 243

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
             ++ V++TH P+GI+V    E+SQ  NR  AM++LR +LY++E ++   + +A RK  +
Sbjct: 244 KVETKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKKHGDIAAKRKTMV 303

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            +GDRS ++RTYN+ QGR+T+HRI LTLY L  V+ G I  II+ L  A  A+ +  
Sbjct: 304 STGDRSAKVRTYNYPQGRVTEHRIGLTLYNLPAVMDGDIQGIIDALQFAENAEKMKE 360


>gi|15604386|ref|NP_220902.1| peptide chain release factor 1 [Rickettsia prowazekii str. Madrid
           E]
 gi|6225942|sp|Q9ZD21|RF1_RICPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3861078|emb|CAA14978.1| PEPTIDE CHAIN RELEASE FACTOR 1 (prfA) [Rickettsia prowazekii]
 gi|292572142|gb|ADE30057.1| Peptide chain release factor RF-1 [Rickettsia prowazekii Rp22]
          Length = 355

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 175/355 (49%), Positives = 247/355 (69%), Gaps = 2/355 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  ++ KI  Y++ K E ++ 
Sbjct: 1   MSFSDNLVKILDKYENLGKKLSSGIIGDEFVKASKEYAELEDVVVKIKQYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++   E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFRLEMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RY+  + W+ E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQR+P TE+ GR+HTSAATVAVLPEA  ID+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRIPETESQGRIHTSAATVAVLPEAEGIDIKIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRARLY+ +R++   ERS +R+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQERSDSRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQ-GYIDDIINPLLTAHQAKMIGSA 355
           RSERIRTYNF QGR++DHRINLTLYK++ V++ G +D+ I  L+   +AK +   
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIANDEAKKLSEL 355


>gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
 gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
          Length = 361

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 250/356 (70%), Gaps = 6/356 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDL 62
            K++ +++  + EIE +M +        +   L +++A + P++     Y Q +    + 
Sbjct: 7   QKRLAEIEQAYREIEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQEYRQVEAGLAEA 66

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++  + + D+E+ +LA+ E  +  K + E+E E++  LLPKD +D+K  I+EIRAGTGG
Sbjct: 67  KSL--EDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKDPNDEKDVIVEIRAGTGG 124

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF  DL+RMY R+     W+ E++  ++ + GGYKEIV  + G G +S++KFESGV
Sbjct: 125 DEASLFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGAYSKLKFESGV 184

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATEASGR+HTSAATVAV+P+A +++++I  ED+ IDT R+SG+GGQHVN TDS
Sbjct: 185 HRVQRVPATEASGRIHTSAATVAVMPQAEDVEIEIRPEDLDIDTYRSSGAGGQHVNMTDS 244

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH PTG++V    E+SQ +NR +AM VLRARLYD+E ++  +E ++ R+  IGSGD
Sbjct: 245 AVRITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQSEEASTRRGMIGSGD 304

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF Q R+TDHRI LTLYKL+Y+L G I ++I+ L  A QA  + + +E
Sbjct: 305 RSERIRTYNFPQNRVTDHRIGLTLYKLDYMLDGDIYEMIDALTMADQAAKLQAQNE 360


>gi|212636630|ref|YP_002313155.1| peptide chain release factor 1 [Shewanella piezotolerans WP3]
 gi|226739120|sp|B8CQV2|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3]
          Length = 361

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 249/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S++  +     +  L++EY+ +  ++     + Q ++
Sbjct: 1   MKDSVIRKLEGLLERNEEVLALLSDAGIIADQERFRALSKEYSQLEDVVKAFKSFQQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D+E++++AQ E  A ++ I  LE+E+  LLLPKD +DD +C +EIR
Sbjct: 61  DLESAKEMM--EEDDAELKEMAQEEYKAAKETIETLESELQILLLPKDPNDDNNCFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY +YA   +W++EV+++++ + GG+KE++A ISG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSKYAESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VLPE  E + ++I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +E  + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEEDSTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYNF QGR+++HRINLTLY+L   ++G ID +I PL+   QA M+ + 
Sbjct: 299 LVSSGDRSERIRTYNFPQGRVSEHRINLTLYRLGEFMEGDIDVVIEPLIQETQADMLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|262041834|ref|ZP_06015019.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040826|gb|EEW41912.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++ ++   D +  L+ EYA +S +    + + Q ++
Sbjct: 1   MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  +E+R
Sbjct: 61  DIETAQMML----DDPEMREMAQEELRDAKEKGDQLEQQLQILLLPKDPDDERNAFVEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA  R+W+VE+LS+++ + GG+KE++A ISG GV+ R+K
Sbjct: 117 AGTGGDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PE  E ++ DI   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIVQEHQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|152970781|ref|YP_001335890.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238895295|ref|YP_002920030.1| peptide chain release factor 1 [Klebsiella pneumoniae NTUH-K2044]
 gi|330009867|ref|ZP_08306623.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
 gi|166223565|sp|A6TAN9|RF1_KLEP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150955630|gb|ABR77660.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238547612|dbj|BAH63963.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328534693|gb|EGF61258.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 253/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++ ++   D +  L+ EYA +S +    + + Q ++
Sbjct: 1   MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  +E+R
Sbjct: 61  DIETAQMML----DDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA  R+W+VE+LS+++ + GG+KE++A ISG GV+ R+K
Sbjct: 117 AGTGGDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PE  E ++ DI   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIVQEHQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|266621433|ref|ZP_06114368.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
 gi|288866872|gb|EFC99170.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
          Length = 358

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 255/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+   + E+ L +         + + +L +E A ++P++   + Y + K   +D  
Sbjct: 3   DKLDDILIHYEELMLELGNPSVTEDQNRFRRLMKEQADLAPLVETYTEYKKAKTAVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  +D E+R+LA+ E+   +K+I  LE E+  LLLPKD +DDK+ ILEIRAG GG 
Sbjct: 63  AIL-DEENDEEMRELAKEELSDAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  Y+  + WKVE++S ++N  GG+KE+VA ++G+G +S++K+ESGVH
Sbjct: 122 EAALFAAELYRMYVNYSESQHWKVELISVNENGIGGFKEVVAMVTGKGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAV+PEA ++DV I  +D RID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVMPEAEDVDVVIEDKDCRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++  N  +  R+ QIG+GDR
Sbjct: 242 VRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQNSEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYK++ ++ G I ++++ L+ A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDITELLDSLIAADQAAKLAKVNE 356


>gi|28378950|ref|NP_785842.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
 gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
 gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|32171522|sp|Q88UT2|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28271787|emb|CAD64693.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
 gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
 gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 239/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E   I   + K + Y +   + ++  
Sbjct: 6   DKLQAVADRYEELGELLSDPEVISDSQRFMKLSKEMGNIRETVEKYNHYKEVTSQIEEND 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+  + + ++  +  E  +LE+EI  L+LPKD +DDK+ I+EI    GG 
Sbjct: 66  ELLHEKLDD-EMNAMVKDDLKNLNAEKDQLEHEITLLMLPKDPNDDKNIIMEIHGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DLF MY +YA  + W+VEV   ++ + GG+KEIV  ISG  V+S++K+ESG H
Sbjct: 125 EASLFAADLFNMYSKYAERQGWQVEVADRNETEVGGFKEIVLIISGDKVYSKLKYESGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PEA ++D+DI  +DIR D  R+SG+GGQH+N T SA
Sbjct: 185 RVQRVPVTESAGRVHTSTATVGVMPEAQDVDIDIDQKDIRTDVFRSSGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V+   ++SQ QNR +AM++LRAR+YD  + R  NE  A RK  +G+GDR
Sbjct: 245 VRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRARVYDYYQSREQNEYDAERKSAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LTL KL+ V+ G +D++I+ L+ A QA+ +   
Sbjct: 305 SERIRTYNFPQNRVTDHRIGLTLNKLDRVMNGELDEVIDALVLADQAEKMERL 357


>gi|82544335|ref|YP_408282.1| peptide chain release factor 1 [Shigella boydii Sb227]
 gi|187734065|ref|YP_001879994.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
 gi|119361607|sp|Q31ZQ4|RF1_SHIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691757|sp|B2TZV9|RF1_SHIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81245746|gb|ABB66454.1| peptide chain release factor RF-1 [Shigella boydii Sb227]
 gi|187431057|gb|ACD10331.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
 gi|320185614|gb|EFW60376.1| Peptide chain release factor 1 [Shigella flexneri CDC 796-83]
 gi|332094801|gb|EGI99845.1| peptide chain release factor 1 [Shigella boydii 3594-74]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|297180269|gb|ADI16488.1| protein chain release factor a [uncultured bacterium HF4000_05M23]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 151/360 (41%), Positives = 239/360 (66%), Gaps = 5/360 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ ++ +R +E+E  MS+       +A  +L  EY+ +  ++   +   + + 
Sbjct: 1   MQQSIEDRLKEIADRHSEVERLMSQPETASDPNAIRRLGREYSQLQHVVELWNDITRAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D+E+ ++A++EV  +++ +  L  EI   LLPKD  +    ++E+R
Sbjct: 61  DMEGAREMLT-AEDDAEVLEMAKVEVEELQERLDSLTAEIRLELLPKDETELADAVVEVR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA LF  ++FRMY+RYA  RKWK+++LS +D   GG KE+   I+G   + R+ 
Sbjct: 120 AGAGGDEAGLFAAEVFRMYQRYAEARKWKLKILSQNDTGVGGIKEVTFEIAGERAYQRLH 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
            ESGVHRVQRVPATE+ GR+HTS ATV V+P+A E+D++I  +D+++D   +SG+GGQ V
Sbjct: 180 LESGVHRVQRVPATESQGRIHTSTATVVVMPKAEEVDIEISDKDLKVDVYHSSGAGGQSV 239

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N   +A+RITH+PTG++V   +E+SQ QNR++AM++LR+RL+D+E ++   E SANRK Q
Sbjct: 240 NKLATAIRITHLPTGLVVQCQNERSQLQNRMQAMEILRSRLWDMELRKQQEEISANRKAQ 299

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +G+GDRSE+IRTYNF Q RITDHRI  T ++++ VL G +D  ++ LL   QA+ + +A 
Sbjct: 300 VGTGDRSEKIRTYNFPQSRITDHRIGYTSHQMQQVLGGELDGFVDALLQEEQARKLAAAG 359


>gi|320174901|gb|EFW50020.1| Peptide chain release factor 1 [Shigella dysenteriae CDC 74-1112]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+  +KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGCLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|189467991|ref|ZP_03016776.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM
           17393]
 gi|189436255|gb|EDV05240.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM
           17393]
          Length = 370

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 147/362 (40%), Positives = 224/362 (61%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMEARKEYIQVLNGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + +D E+R++A+ E+ A +    ELE  I  LL+P D  D K+ ILEIR GTGG 
Sbjct: 69  EIIT-NEADPEMREMAREELDACQARQPELEEHIKLLLVPADPQDSKNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++   + WK+E+ S ++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYTKFCETKGWKMEISSVNEGAAGGFKEIICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ ++            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYLDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|146329088|ref|YP_001209002.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
 gi|146232558|gb|ABQ13536.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
          Length = 365

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 167/357 (46%), Positives = 236/357 (66%), Gaps = 9/357 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +++  +  R+ E+   +++           +  +E+A ++PI+      +  +QE  DL
Sbjct: 9   KEKLITICERYEELNALLADPSVAADPDLLRRYGQEHAQLAPIVEIFQEIEHLQQEANDL 68

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      D+E+ +    E     K+  E E ++  L++P+D  D+ +  LEIRAGTGG
Sbjct: 69  KEL----EDDAEMAEYVAAEQSENLKKTEECEQKLARLMIPQDPLDEANIFLEIRAGTGG 124

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAA+F GDL RMY R+A  R W++ VLS +  + GGY+EI+  +SG+ V+S +KFESG 
Sbjct: 125 DEAAIFAGDLMRMYARFAENRGWQISVLSENAGEFGGYREIICRVSGQRVYSTLKFESGA 184

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HRVQRVP TEASGR+HTSAATVAVLPE+ E  D++I   D+R+DT RASG+GGQHVN TD
Sbjct: 185 HRVQRVPETEASGRIHTSAATVAVLPESDEIEDIEINPADLRVDTFRASGAGGQHVNKTD 244

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+RITH+PTGI+V    E+SQH+NR +AM+ L A+L D ER+    E +A RK  +G+G
Sbjct: 245 SAIRITHLPTGIVVECQEERSQHKNRAKAMRWLYAKLMDRERQAAEKEIAAERKSLVGTG 304

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYN+ QGR+TDHRINLTLY L+ VL G +D ++ PL  A +   + +  E
Sbjct: 305 DRSERIRTYNYPQGRVTDHRINLTLYALDDVLNGQLDLLVIPLQQAQETNDLLALQE 361


>gi|138896954|ref|YP_001127407.1| peptide chain release factor 1 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249772|ref|ZP_03148468.1| peptide chain release factor 1 [Geobacillus sp. G11MC16]
 gi|166223561|sp|A4ITK8|RF1_GEOTN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134268467|gb|ABO68662.1| Peptide chain release factor 1 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210648|gb|EDY05411.1| peptide chain release factor 1 [Geobacillus sp. G11MC16]
          Length = 358

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 160/355 (45%), Positives = 236/355 (66%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ ++   + +   ++   KL   ++E A ++  +     Y   + +  +  
Sbjct: 3   DRLEAVEQRYEKLNELLMDPAVINDPKKLRDYSKEQADLTETVQTYREYKSVRSQLAEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   + E+R++ + E+  +E+    L  ++  LLLPKD +D+K+ I+EIRA  GG 
Sbjct: 63  AML-EEKLEPELREMVKEEIDELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK EV+ +S    GGYKEI+  ++G+G +S++KFE+G H
Sbjct: 122 EAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMVNGKGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPE  E++V+I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVACLPEMEEVEVEIHEKDIRVDTYASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQEARAEYDQTRKQAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF Q R+TDHRI LT+ KL+ VL G +D+II  L+   Q+K +  A++
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDLVLDGQLDEIIEALILDDQSKKLEQAND 356


>gi|117621299|ref|YP_857649.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223525|sp|A0KMZ8|RF1_AERHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117562706|gb|ABK39654.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 362

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 167/362 (46%), Positives = 237/362 (65%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  + E       D Y  LT EYA +  I+     + Q ++
Sbjct: 1   MNPSLIRKLEGLIERHEEVQAMLGEPDVAADQDRYRALTREYAQLEDIVHAFQQFRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  ++     D+++R++AQ E+   +    E E  +  +LLP+D  DD +C LEIR
Sbjct: 61  NLDATRQML--EEDDADLREMAQEELPLAKATFEEQEQALQVMLLPRDPKDDNNCYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  + W+V ++S +D + GGYKE++A + G  V+ R+K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIAKVEGEHVYGRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPE  E   ++I   +++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSELKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM VL ARL   E +R      + R+ 
Sbjct: 239 VNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+++HRINLTLY+L  +++G +D +I+P++  +QA  + S 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLGEIMEGDLDCVISPMIQEYQADQLASL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|256023112|ref|ZP_05436977.1| peptide chain release factor 1 [Escherichia sp. 4_1_40B]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIREHQADQLAALSE 358


>gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
 gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
          Length = 361

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   +S++ ++     + +L+ EY+ +  +++    Y   K 
Sbjct: 1   MKSSLLHKLELLVERHEEVSALLSDAETISNQERFRELSREYSELEEVVATFKRYQTAKD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D   D ++R++A+ E+ A ++ I  LE E+  LLLPKD  D  +  LEIR
Sbjct: 61  DMEAAQLMLLD--DDPDMREMAEEELDAAKEAIEALEIELQRLLLPKDPKDSANVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA   KW++EVLS    + GGYKEI+  + GR V++ +K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERMKWRLEVLSERAGEHGGYKEIITRVEGRDVYAHLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+   A    ++I   DIR+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVMAEAAEVDAIEINKADIRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTGI+V    E+SQH+NR RAM +L+A+L     ++ A+E++  R+ 
Sbjct: 239 VNKTDSAIRITHLPTGIVVECQDERSQHKNRARAMSLLQAKLDTAAEEKAASEQAQERRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+RIRTYNF QGR+TDHRINLTLYKL+ +++G +D ++ PL   +QA  + + 
Sbjct: 299 LVGTGDRSDRIRTYNFPQGRMTDHRINLTLYKLDEIMEGDLDSVVTPLRQEYQADQLAAL 358

Query: 356 SE 357
           S+
Sbjct: 359 SD 360


>gi|324113971|gb|EGC07945.1| peptide chain release [Escherichia fergusonii B253]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEGRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|15801440|ref|NP_287457.1| peptide chain release factor 1 [Escherichia coli O157:H7 EDL933]
 gi|12514924|gb|AAG56069.1|AE005338_9 peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           EDL933]
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSPCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor
           Methylation By Prmc
          Length = 360

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  D+   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|288905236|ref|YP_003430458.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
 gi|306831307|ref|ZP_07464467.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978212|ref|YP_004287928.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731962|emb|CBI13527.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
 gi|304426543|gb|EFM29655.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178140|emb|CBZ48184.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 359

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 159/359 (44%), Positives = 234/359 (65%), Gaps = 4/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   +I D   D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  EDAEEMIKDAGGDPELEEMAKEELKDSKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL +MY++YA  + WK +V+ +S N  GG KE+V  +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   NE+ A RK  IG
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K +   ++
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQTKKLEELNQ 359


>gi|153854177|ref|ZP_01995485.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
 gi|149753226|gb|EDM63157.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
          Length = 358

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 246/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL+ R  EI   + E    +    + KL +E   ++PI+   + Y + KQ  +D  
Sbjct: 3   DKLEDLRIRLDEILNELQEPDVANDQNRFRKLMKEQNDLTPIVEAYNEYKECKQAIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +  SD E+R+LA+ E+   +K + ELE E+  LLLPKD +D+K+ I+EIRAG GG 
Sbjct: 63  E-MLEEESDEEMRELAKEELNDNKKRVEELEQELKILLLPKDPNDEKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  ++WKVE++   +   GG K +   I G+G +S+MK+ESGVH
Sbjct: 122 EAALFAAEIYRMYMHYAESQRWKVELVECEEIGIGGMKNVTFMIDGKGAYSKMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA ++D+ I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEDVDIQIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LRA+LYD+E ++  +  +  RK QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKDKAFALLRAKLYDLECQKRHDAEAEARKSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYKL+ ++ G I +II+  + A QA  + + +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQAAKLANMNE 356


>gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|32171533|sp|Q8CNI7|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153098|sp|Q5HMA4|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144]
 gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045]
 gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028]
          Length = 358

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 249/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E QD+ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQDIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E  ++ + E  A++ E+ ++E E+  LL+PKD +DDK  I+EIRA  GG 
Sbjct: 63  DMLNET-SDKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA    +K E++ +S++D GGYKE+  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G +D+I+  L  + Q + +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGNLDEIVEALTLSEQTEKLKELN 354


>gi|313113834|ref|ZP_07799401.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623861|gb|EFQ07249.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 363

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 146/355 (41%), Positives = 236/355 (66%), Gaps = 5/355 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  + +RF E+ +R+++  +      + +L  EY    P++     +   +        
Sbjct: 7   QMDAVCHRFEELSIRLNQPDTAADPALFRRLMREYHDAEPVVQAYRAWQTAQDHLAQAKA 66

Query: 65  VIGDHNS-DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++ +  + D + + + Q E+    +++ +LEN +  LLLPKD +D K+ I+EIR G GG 
Sbjct: 67  LLEEPGALDPDFKQMIQQEISEKSQDVEKLENNLKILLLPKDVNDGKNVIVEIRGGAGGE 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L RMY  Y   R W++E+L+ ++ + GG KE + ++ G G ++R+K+ESGVH
Sbjct: 127 EAALFAHSLLRMYTMYVQSRGWQLEMLNLNETELGGVKEAIFSVDGAGAYNRLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTS ATVAV+P+A E+D  + ++D+RIDT R+SG+GGQH+N T SA
Sbjct: 187 RVQRVPETETQGRIHTSTATVAVMPQAEEVDFALDMKDLRIDTFRSSGAGGQHINKTSSA 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +R+TH+PTG++V   +E+SQ QN+ +A+++LR+RL   ++K+  +  +A+R+ Q+G+GDR
Sbjct: 247 IRVTHLPTGMVVECQNERSQFQNKDKALEILRSRLLAQKQKQQQDAINASRQGQVGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF Q R TDHRI LT++ L  ++ G +D++I+ L T  QA+ +   +E
Sbjct: 307 SEKIRTYNFPQDRCTDHRIGLTVHNLSKIMDGNLDEVIDALATREQAEKLQKLNE 361


>gi|42527989|ref|NP_973087.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
 gi|81570139|sp|Q73JU6|RF1_TREDE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41819034|gb|AAS13006.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
          Length = 361

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 176/355 (49%), Positives = 252/355 (70%), Gaps = 5/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ +L+ R  E+E  +     +     Y +   E++ +S ++ +   Y   +++ +D
Sbjct: 1   MKERLDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I +  SD+E++++A+ E+ ++E    + E ++  LL+P D  ++K+ I+EIR GTG
Sbjct: 61  SKLLIQEE-SDAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA ++ WK EVLS ++ + GGYKEI  +ISG+ V+  +++ESG
Sbjct: 120 GDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLRYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE SGR+HTSA TVAVLPEA E +++I  ED+RID MRA G GGQ VNTTD
Sbjct: 180 VHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG++V    EKSQ +N+ +AM+VLR+RLYD+E  +   ER+ NRK Q+GSG
Sbjct: 240 SAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAERAQNRKSQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF Q R+TDHRINLTLYKL+ V+QG +D++I+ L  A + +M+ +A
Sbjct: 300 DRSERIRTYNFPQNRVTDHRINLTLYKLDAVMQGSLDELIDALCIAAREEMMKAA 354


>gi|320546676|ref|ZP_08040988.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
 gi|320448731|gb|EFW89462.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
          Length = 359

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 159/358 (44%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVAVYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   +I D   D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  EDAEEMIKDAGGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL +MY++YA  + WK +V+ +S N  GG KE+V  +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMKV+RAR+ D   +   NE+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKVIRARVADHFAQIAQNEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+II+ L+   Q K +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEIIDALVLFDQTKKLEELN 358


>gi|167752375|ref|ZP_02424502.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216]
 gi|167660616|gb|EDS04746.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216]
          Length = 361

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 228/353 (64%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  LK ++ EI  ++++   +     +I+  +EY  + PII     Y        +   
Sbjct: 9   RLDGLKLKYEEIGQKLTDPEVIADVKQFIQFNKEYRELEPIIEASERYRTAIANLAEAKD 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++  ++ D E+R++A+ E+  +E +I  LE EI  LL+PKD  D K+ I+EIR GTGG E
Sbjct: 69  ILA-NDKDEEMREMARGEIAELEPKIETLEEEIKLLLIPKDPQDAKNAIVEIRGGTGGDE 127

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDL RMY +Y   + WK E+ S S+   GGYKE+V  ++G  V+  +K+ESGVHR
Sbjct: 128 AAIFAGDLMRMYTKYIESKGWKYEITSFSEGTAGGYKEVVMKVTGNNVYGTLKYESGVHR 187

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTSAA+VAVLPEA E DV+I + DIR D   ASG GGQ VNTT SA+
Sbjct: 188 VQRVPQTETQGRVHTSAASVAVLPEAEEFDVEISMNDIRKDIFCASGPGGQSVNTTYSAI 247

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V    +KSQ +N  +A + LR R++++E  +  +E ++ RK  + +GDRS
Sbjct: 248 RLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDEIASKRKTMVSTGDRS 307

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  + 
Sbjct: 308 AKIRTYNYPQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAENAERLKESE 360


>gi|288925782|ref|ZP_06419713.1| peptide chain release factor 1 [Prevotella buccae D17]
 gi|315608268|ref|ZP_07883258.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574]
 gi|288337437|gb|EFC75792.1| peptide chain release factor 1 [Prevotella buccae D17]
 gi|315250049|gb|EFU30048.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574]
          Length = 370

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 141/360 (39%), Positives = 218/360 (60%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++RF E+   +++   +       KLT+EY  +  I+     Y       ++  
Sbjct: 9   EKLDGLESRFEEVSTLITDPDVIADQQRYVKLTKEYKDLGDIMDVRKRYIACLNAIKESK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD++++++A+ E+   E    +LE EI   L+PKD +D K+  +EIRAG GG 
Sbjct: 69  DILA-NESDADMKEMAREELATNEDLQPKLEEEIKIALVPKDPEDAKNVQMEIRAGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++Y   + W + V S S+   GGYKEI   +SG  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKKYCDSKGWNLSVTSVSEGAVGGYKEIDFAVSGVDVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   ++D E ++  ++ ++ RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYIDDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  + G I D+I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNFPQGRVTDHRIGYTTHDLQGFMGGDIQDMIDALTVAENAEKLKE 367


>gi|225027777|ref|ZP_03716969.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
 gi|224954923|gb|EEG36132.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
          Length = 359

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 244/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R  E+   +SE   V     +  L +E   ++PI+ K   Y + KQ  +D  
Sbjct: 3   DKLEDLVKRLDEVMQELSEPDVVSDQNRFRNLMKEQNELAPIVEKYKEYKEAKQTIED-S 61

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +   D E+R+L + E+   +K + + E E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 62  VEMLEEEHDEEMRELLKEELSEAKKNVEQYEEELKVLLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY+ YA  ++WK E +  ++N  GG+KE+   I+G+G +SR+K+ESGVH
Sbjct: 122 EAALFAAEIYRMYKNYAESKRWKTEFIDVNENGIGGFKEVSFMINGQGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE+ GR+HTS  TVA++PEA E+DV + + D R D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPATESGGRIHTSTITVAIMPEAEEVDVQLDMNDCRFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +A+KVLRARLYD+E+ +  +  +  RK QIG+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLKNKDKAIKVLRARLYDLEQSKAHDAEAELRKSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +E+IRTYNF QGR+TDHRI LTL++L+ +L G +D+II+ L  A QA  +    E
Sbjct: 302 AEKIRTYNFPQGRVTDHRIKLTLHRLDDILNGDLDEIIDSLTAADQAAKLSKLQE 356


>gi|315651889|ref|ZP_07904892.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986]
 gi|315485891|gb|EFU76270.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986]
          Length = 356

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 252/355 (70%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             + D+   + EI   ++     +    + KL +E + ++P++     Y + KQ ++D  
Sbjct: 3   DNLEDIVVHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKAKQLQEDAL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    +D E++++A+ E+   ++   EL +++  LLLPKD +DDK+ +LEIRAG GG 
Sbjct: 63  EMLEM--NDEEMKEMAKEELAEGKRLEEELSDKLKILLLPKDPNDDKNIMLEIRAGAGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L+RMY  YA  + WKVE++  ++N  GGYKE+VA +SG+G +S++K+ESGVH
Sbjct: 121 EAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS A+VAV+PEA E+DV I + D+RID MRASG+GGQ VNTTDSA
Sbjct: 181 RVQRVPETESGGRIHTSTASVAVMPEAEEVDVQIDMNDVRIDVMRASGNGGQCVNTTDSA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LR++LY++E ++  +  +A+R+ QIG+GDR
Sbjct: 241 VRLTHYPTGIVIYSQTEKSQLQNKEKAFTLLRSKLYEIELEKKQSAEAADRRSQIGTGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRINLTLYKL+ ++ G I ++I+  + A QA  +   +E
Sbjct: 301 SEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQAAKLAKLNE 355


>gi|294085498|ref|YP_003552258.1| protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665073|gb|ADE40174.1| Protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 358

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 183/356 (51%), Positives = 252/356 (70%), Gaps = 4/356 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPS--VDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 +  +  R  E+E  ++++ S  VD       E + + P+  +I +  +   E  
Sbjct: 1   MSLDSTMDKVLARRTEVENILNDAASLSVDEMANFARELSELRPVCEQIELVQRLTSELS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++G+   D ++ ++A++E+  ++ +I + + ++  LLLPKD DD ++ ILE+RAGT
Sbjct: 61  DAEVMVGEAGDDPDMLEMARLEMQELQAQIPDEQQKLQLLLLPKDRDDARNAILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLF MY+R++A   WK EV+  S+   GGYKE  ATI+G  VF+R+KFES
Sbjct: 121 GGDEAALFASDLFGMYQRFSAKYGWKFEVMEVSETGIGGYKEATATITGSDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPEA ++DV++   D+RID  RASG GGQ VNTT
Sbjct: 181 GVHRVQRVPETETGGRIHTSAATVAVLPEAEDVDVEVVESDLRIDVFRASGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V+  + KSQH+NR +AMK+LRARLYD ER R+  ER+A+RK Q+GS
Sbjct: 241 DSAVRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVQAERAADRKGQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G  +D++I+ L++  QA+ +  
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLDRVIAGEALDEVIDALISEDQARRLAE 356


>gi|170768314|ref|ZP_02902767.1| peptide chain release factor 1 [Escherichia albertii TW07627]
 gi|170123080|gb|EDS92011.1| peptide chain release factor 1 [Escherichia albertii TW07627]
          Length = 360

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++   D +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD++   LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERDAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAETRRWQVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIVQEHQADQLAALSE 358


>gi|283785500|ref|YP_003365365.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
 gi|282948954|emb|CBG88557.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
          Length = 360

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAETIADQERFRALSREYAQLSDVSRCFTDWRQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELRDAKEKSEQLEQQLQLLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S ++ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAETRRWRVEIMSMNEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTYRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPVVQEYQADQLAALSE 358


>gi|323187441|gb|EFZ72750.1| peptide chain release factor 1 [Escherichia coli RN587/1]
          Length = 360

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLP+D DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPRDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|147567|gb|AAA24519.1| peptide chain release factor 1 [Escherichia coli]
          Length = 360

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTT SA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTGSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|145298193|ref|YP_001141034.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166223526|sp|A4SK64|RF1_AERS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|142850965|gb|ABO89286.1| Protein chain release factor A [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 362

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 239/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  + E       D Y  LT EYA +  I+     + Q ++
Sbjct: 1   MNPSLIRKLEGLIERHEEVQAMLGEPGVASDQDRYRALTREYAQLEDIVHAFQRFRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +    ++     D+++R++AQ E+   +  + E E  +  +LLP+D  DD +C LEIR
Sbjct: 61  NLEATKLML--EEDDADLREMAQEELPLAKSTLEEQEQALQVMLLPRDPKDDNNCYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  + W++ ++S +D + GGYKE++A + G  V+ R+K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAERQGWRISIVSCNDGEHGGYKEVIAKVDGEHVYGRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAVLPE  E   ++I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINANDLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+PTG++V    E+SQH+NR +AM VL ARL   E +R      + R+ 
Sbjct: 239 VNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+++HRINLTLY+L  +++G +D II+P++  +QA  + S 
Sbjct: 299 LVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLGEIMEGDLDCIISPMIQEYQADQLASL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|305664895|ref|YP_003861182.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
 gi|88707725|gb|EAQ99965.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
          Length = 358

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 165/357 (46%), Positives = 233/357 (65%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+   + +   +     Y++LT+EY  +  ++ K   Y +     Q+
Sbjct: 1   MIDKLNIVKQRFDEVSDLIIQPDVISDQKRYVQLTKEYKDLKDLMEKRDAYVELTNNIQE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+E+ ++A++++   +  + +LE +I  +L+PKD +D K  ++EIRAGTG
Sbjct: 61  AEEIISD-GSDAEMLEMAKMQLDEAKTALPKLEEDIKLMLIPKDPEDAKDVVVEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y   R WK  V+  S+   GGYKEI   +SG  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYTKYCEGRGWKTNVIDLSEGTSGGYKEIQFEVSGADVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA + DV I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQIDPKDVRIDFFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++     +KSQH+N+ +A +VLR+RLYD+E  R   E +A R  Q+ SG
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKAFRVLRSRLYDLELARKQEEDAAKRNSQVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN++QGR+TDHRI LTLY L+ ++ G I  II+ L      + +  ASE
Sbjct: 300 DRSAKIRTYNYAQGRVTDHRIGLTLYDLQNIINGDIQKIIDELSLVENTEKLKEASE 356


>gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
 gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
          Length = 361

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 163/361 (45%), Positives = 237/361 (65%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+   + +   +     + +L+ E++ +  ++     Y + + 
Sbjct: 1   MKPSLLLKLETLSERHEEVSALLGDPGVISDQDQFRRLSREFSELETVVKCFGEYQELQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +   +++ D   D+++R++A+ E+   E     LE E+  LLLP+D  D  +  LEIR
Sbjct: 61  DLEAAESMLAD--DDADMREMAKTEISEGEARREALEAELQLLLLPRDPKDSHNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDL RMY R+A  + W++EVLS    + GGYKEI++ I G  V++ +K
Sbjct: 119 AGTGGDEAAIFSGDLQRMYSRFAERQGWRIEVLSERPGEHGGYKEIISRIEGSDVYAYLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA+L E  E   V+I   D+R+DT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAILAEPEELEAVEINKADLRVDTYRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+PTGI+V    E+SQH+NR RAM +L+A+L  V  +  A+E++  R+ 
Sbjct: 239 VNKTDSAVRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLDSVAEESQASEQAEQRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+RIRTYNF QGR+TDHRINLTLYKL+ V+ G ++ ++ PL   HQA  + + 
Sbjct: 299 LVGTGDRSDRIRTYNFPQGRVTDHRINLTLYKLDEVMAGDMEAVLGPLRQEHQADQLAAM 358

Query: 356 S 356
           S
Sbjct: 359 S 359


>gi|257439051|ref|ZP_05614806.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
           A2-165]
 gi|257198541|gb|EEU96825.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
           A2-165]
          Length = 356

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 152/352 (43%), Positives = 233/352 (66%), Gaps = 4/352 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  + +RF E+ +R+++  +      + +L +EY    P++         +        +
Sbjct: 1   MEAVSHRFEELSIRLNQPETAADPALFRRLMQEYHEAEPVVQAYQALTTAQDHLAQAKAL 60

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D + +++ Q E+    +E+ +LEN +  LLLPKD +DDKS I+E+R G GG EA
Sbjct: 61  LEGETLDPDFKEMVQQEIGEKSQEVAQLENNLKILLLPKDVNDDKSVIMELRGGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF   L RMY  Y   R W++EVL+ ++ + GG KE +  ++G G ++R+K+ESGVHRV
Sbjct: 121 ALFAHSLMRMYTMYVQSRGWELEVLNLNETELGGVKEAILAVNGAGAYNRLKYESGVHRV 180

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE  GR+HTS ATVAV+P+A E+D+ I  +D+RIDT R+SG+GGQH+N T SA+R
Sbjct: 181 QRVPETETQGRIHTSTATVAVMPQAEEVDLVIDPKDLRIDTFRSSGAGGQHINKTSSAIR 240

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTG++V   +E+SQ QN+ +A++VLR+RL   ++K   +  +ANR  Q+G+GDRSE
Sbjct: 241 VTHIPTGMVVECQNERSQFQNKDKALEVLRSRLLAQKQKEQQDAINANRAGQVGTGDRSE 300

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +IRTYNF Q R TDHRI LT++ L+ ++ G +D+II+ L T  QA+ +   +
Sbjct: 301 KIRTYNFPQDRCTDHRIGLTVHNLDKIMDGNLDEIIDALATHEQAEKLRQLN 352


>gi|317475302|ref|ZP_07934568.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA]
 gi|316908556|gb|EFV30244.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA]
          Length = 370

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 145/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  +++    Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + +D+E+R++A+ E+ A +    ELE +I  LL+P D  D ++ ILEIR G GG 
Sbjct: 69  EIIA-NETDAEMREMAREELDACQTRQPELEEQIKLLLVPADPQDSRNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+++ S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|15830970|ref|NP_309743.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           Sakai]
 gi|16129174|ref|NP_415729.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. MG1655]
 gi|24112610|ref|NP_707120.1| peptide chain release factor 1 [Shigella flexneri 2a str. 301]
 gi|26247534|ref|NP_753574.1| peptide chain release factor 1 [Escherichia coli CFT073]
 gi|30062735|ref|NP_836906.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
 gi|74312449|ref|YP_310868.1| peptide chain release factor 1 [Shigella sonnei Ss046]
 gi|82776551|ref|YP_402900.1| peptide chain release factor 1 [Shigella dysenteriae Sd197]
 gi|89108056|ref|AP_001836.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. W3110]
 gi|91210432|ref|YP_540418.1| peptide chain release factor 1 [Escherichia coli UTI89]
 gi|110641441|ref|YP_669171.1| peptide chain release factor 1 [Escherichia coli 536]
 gi|110805216|ref|YP_688736.1| peptide chain release factor 1 [Shigella flexneri 5 str. 8401]
 gi|117623429|ref|YP_852342.1| peptide chain release factor 1 [Escherichia coli APEC O1]
 gi|157158410|ref|YP_001462464.1| peptide chain release factor 1 [Escherichia coli E24377A]
 gi|157160716|ref|YP_001458034.1| peptide chain release factor 1 [Escherichia coli HS]
 gi|168750771|ref|ZP_02775793.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758136|ref|ZP_02783143.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764382|ref|ZP_02789389.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4501]
 gi|168771100|ref|ZP_02796107.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776896|ref|ZP_02801903.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4196]
 gi|168782567|ref|ZP_02807574.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4076]
 gi|168787715|ref|ZP_02812722.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC869]
 gi|168801524|ref|ZP_02826531.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC508]
 gi|170020422|ref|YP_001725376.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
 gi|170080839|ref|YP_001730159.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682630|ref|YP_001743983.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
 gi|188494282|ref|ZP_03001552.1| peptide chain release factor 1 [Escherichia coli 53638]
 gi|191170894|ref|ZP_03032445.1| peptide chain release factor 1 [Escherichia coli F11]
 gi|193064852|ref|ZP_03045929.1| peptide chain release factor 1 [Escherichia coli E22]
 gi|193069953|ref|ZP_03050901.1| peptide chain release factor 1 [Escherichia coli E110019]
 gi|194426002|ref|ZP_03058558.1| peptide chain release factor 1 [Escherichia coli B171]
 gi|194434263|ref|ZP_03066529.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
 gi|194437123|ref|ZP_03069222.1| peptide chain release factor 1 [Escherichia coli 101-1]
 gi|195939099|ref|ZP_03084481.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807446|ref|ZP_03249783.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816069|ref|ZP_03257248.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822717|ref|ZP_03263036.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4042]
 gi|209398404|ref|YP_002270145.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209918452|ref|YP_002292536.1| peptide chain release factor 1 [Escherichia coli SE11]
 gi|217328218|ref|ZP_03444300.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14588]
 gi|218549098|ref|YP_002382889.1| peptide chain release factor 1 [Escherichia fergusonii ATCC 35469]
 gi|218553765|ref|YP_002386678.1| peptide chain release factor 1 [Escherichia coli IAI1]
 gi|218558140|ref|YP_002391053.1| peptide chain release factor 1 [Escherichia coli S88]
 gi|218694725|ref|YP_002402392.1| peptide chain release factor 1 [Escherichia coli 55989]
 gi|218699918|ref|YP_002407547.1| peptide chain release factor 1 [Escherichia coli IAI39]
 gi|218704733|ref|YP_002412252.1| peptide chain release factor 1 [Escherichia coli UMN026]
 gi|227886367|ref|ZP_04004172.1| peptide chain release factor 1 [Escherichia coli 83972]
 gi|237705173|ref|ZP_04535654.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
 gi|238900442|ref|YP_002926238.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
 gi|253773790|ref|YP_003036621.1| peptide chain release factor 1 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161293|ref|YP_003044401.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
 gi|254792681|ref|YP_003077518.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018539|ref|ZP_05432404.1| peptide chain release factor 1 [Shigella sp. D9]
 gi|260843503|ref|YP_003221281.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
           12009]
 gi|260854872|ref|YP_003228763.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
           11368]
 gi|260867616|ref|YP_003234018.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
           11128]
 gi|261224943|ref|ZP_05939224.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257200|ref|ZP_05949733.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291282236|ref|YP_003499054.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404754|ref|ZP_06648746.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
 gi|293409598|ref|ZP_06653174.1| peptide chain release factor 1 [Escherichia coli B354]
 gi|293414488|ref|ZP_06657137.1| peptide chain release factor 1 [Escherichia coli B185]
 gi|293433527|ref|ZP_06661955.1| peptide chain release factor 1 [Escherichia coli B088]
 gi|298380397|ref|ZP_06989996.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
 gi|300816902|ref|ZP_07097122.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
 gi|300821019|ref|ZP_07101168.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
 gi|300896599|ref|ZP_07115118.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
 gi|300906882|ref|ZP_07124556.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
 gi|300921823|ref|ZP_07137980.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
 gi|300928243|ref|ZP_07143780.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
 gi|300939553|ref|ZP_07154210.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
 gi|300951678|ref|ZP_07165502.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
 gi|300955611|ref|ZP_07167968.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
 gi|300971920|ref|ZP_07171708.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
 gi|300995966|ref|ZP_07181328.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
 gi|301017243|ref|ZP_07182024.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
 gi|301046860|ref|ZP_07193977.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
 gi|301305581|ref|ZP_07211672.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
 gi|301327073|ref|ZP_07220355.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
 gi|301648136|ref|ZP_07247889.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
 gi|306813891|ref|ZP_07448064.1| peptide chain release factor 1 [Escherichia coli NC101]
 gi|307137826|ref|ZP_07497182.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|307310034|ref|ZP_07589684.1| peptide chain release factor 1 [Escherichia coli W]
 gi|309789161|ref|ZP_07683754.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
 gi|309794302|ref|ZP_07688726.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
 gi|312971398|ref|ZP_07785573.1| peptide chain release factor 1 [Escherichia coli 1827-70]
 gi|331641741|ref|ZP_08342876.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|331646529|ref|ZP_08347632.1| peptide chain release factor 1 [Escherichia coli M605]
 gi|331662614|ref|ZP_08363537.1| peptide chain release factor 1 [Escherichia coli TA143]
 gi|331667595|ref|ZP_08368459.1| peptide chain release factor 1 [Escherichia coli TA271]
 gi|331676991|ref|ZP_08377687.1| peptide chain release factor 1 [Escherichia coli H591]
 gi|331682700|ref|ZP_08383319.1| peptide chain release factor 1 [Escherichia coli H299]
 gi|332279599|ref|ZP_08392012.1| peptide chain release factor RF-1 [Shigella sp. D9]
 gi|67471891|sp|P0A7I0|RF1_ECOLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471892|sp|P0A7I1|RF1_ECOL6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471893|sp|P0A7I2|RF1_ECO57 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471894|sp|P0A7I3|RF1_SHIFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361536|sp|Q0TIF9|RF1_ECOL5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361537|sp|Q1RCM7|RF1_ECOUT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361608|sp|Q32GZ6|RF1_SHIDS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361609|sp|Q3Z0S9|RF1_SHISS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122957490|sp|Q0T5I4|RF1_SHIF8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223555|sp|A1AAD8|RF1_ECOK1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977361|sp|A7ZKY5|RF1_ECO24 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977362|sp|A7ZZE7|RF1_ECOHS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039971|sp|B1IU82|RF1_ECOLC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739104|sp|B7MKB3|RF1_ECO45 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739105|sp|B7NUX7|RF1_ECO7I RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739106|sp|B7LXC6|RF1_ECO8A RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739107|sp|B7N422|RF1_ECOLU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739108|sp|B1LH89|RF1_ECOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739109|sp|B7LSH9|RF1_ESCF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576656|sp|B1XAQ2|RF1_ECODH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058712|sp|B5YXM9|RF1_ECO5E RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058713|sp|B6I9S6|RF1_ECOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790881|sp|B7LGX2|RF1_ECO55 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585238|sp|C4ZTQ2|RF1_ECOBW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|26107935|gb|AAN80134.1|AE016759_408 Peptide chain release factor 1 [Escherichia coli CFT073]
 gi|1651601|dbj|BAA36069.1| peptide chain release factor RF-1 [Escherichia coli str. K12
           substr. W3110]
 gi|1787462|gb|AAC74295.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13361181|dbj|BAB35139.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           Sakai]
 gi|24051515|gb|AAN42827.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 301]
 gi|30040983|gb|AAP16713.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 2457T]
 gi|73855926|gb|AAZ88633.1| peptide chain release factor RF-1 [Shigella sonnei Ss046]
 gi|81240699|gb|ABB61409.1| peptide chain release factor RF-1 [Shigella dysenteriae Sd197]
 gi|91072006|gb|ABE06887.1| peptide chain release factor RF-1 [Escherichia coli UTI89]
 gi|110343033|gb|ABG69270.1| peptide chain release factor 1 [Escherichia coli 536]
 gi|110614764|gb|ABF03431.1| peptide chain release factor RF-1 [Shigella flexneri 5 str. 8401]
 gi|115512553|gb|ABJ00628.1| peptide chain release factor 1 [Escherichia coli APEC O1]
 gi|157066396|gb|ABV05651.1| peptide chain release factor 1 [Escherichia coli HS]
 gi|157080440|gb|ABV20148.1| peptide chain release factor 1 [Escherichia coli E24377A]
 gi|169755350|gb|ACA78049.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
 gi|169888674|gb|ACB02381.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520348|gb|ACB18526.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
 gi|187767792|gb|EDU31636.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015105|gb|EDU53227.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4113]
 gi|188489481|gb|EDU64584.1| peptide chain release factor 1 [Escherichia coli 53638]
 gi|188999995|gb|EDU68981.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354981|gb|EDU73400.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4401]
 gi|189360046|gb|EDU78465.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365613|gb|EDU84029.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4501]
 gi|189372547|gb|EDU90963.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC869]
 gi|189376326|gb|EDU94742.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC508]
 gi|190908626|gb|EDV68214.1| peptide chain release factor 1 [Escherichia coli F11]
 gi|192927537|gb|EDV82154.1| peptide chain release factor 1 [Escherichia coli E22]
 gi|192956706|gb|EDV87161.1| peptide chain release factor 1 [Escherichia coli E110019]
 gi|194416057|gb|EDX32323.1| peptide chain release factor 1 [Escherichia coli B171]
 gi|194417494|gb|EDX33597.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
 gi|194424106|gb|EDX40094.1| peptide chain release factor 1 [Escherichia coli 101-1]
 gi|208727247|gb|EDZ76848.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4206]
 gi|208732717|gb|EDZ81405.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738202|gb|EDZ85885.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4042]
 gi|209159804|gb|ACI37237.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209772528|gb|ACI84576.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772530|gb|ACI84577.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772532|gb|ACI84578.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772534|gb|ACI84579.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772536|gb|ACI84580.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209911711|dbj|BAG76785.1| peptide chain release factor 1 [Escherichia coli SE11]
 gi|217318645|gb|EEC27071.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14588]
 gi|218351457|emb|CAU97165.1| peptide chain release factor RF-1 [Escherichia coli 55989]
 gi|218356639|emb|CAQ89265.1| peptide chain release factor RF-1 [Escherichia fergusonii ATCC
           35469]
 gi|218360533|emb|CAQ98091.1| peptide chain release factor RF-1 [Escherichia coli IAI1]
 gi|218364909|emb|CAR02605.1| peptide chain release factor RF-1 [Escherichia coli S88]
 gi|218369904|emb|CAR17679.1| peptide chain release factor RF-1 [Escherichia coli IAI39]
 gi|218431830|emb|CAR12715.1| peptide chain release factor RF-1 [Escherichia coli UMN026]
 gi|222033010|emb|CAP75750.1| Peptide chain release factor 1 [Escherichia coli LF82]
 gi|226899930|gb|EEH86189.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
 gi|227836571|gb|EEJ47037.1| peptide chain release factor 1 [Escherichia coli 83972]
 gi|238861984|gb|ACR63982.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
 gi|242376990|emb|CAQ31713.1| peptide chain release factor RF1 [Escherichia coli BL21(DE3)]
 gi|253324834|gb|ACT29436.1| peptide chain release factor 1 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973194|gb|ACT38865.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
 gi|253977408|gb|ACT43078.1| peptide chain release factor 1 [Escherichia coli BL21(DE3)]
 gi|254592081|gb|ACT71442.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257753521|dbj|BAI25023.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
           11368]
 gi|257758650|dbj|BAI30147.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
           12009]
 gi|257763972|dbj|BAI35467.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
           11128]
 gi|260449654|gb|ACX40076.1| peptide chain release factor 1 [Escherichia coli DH1]
 gi|281178397|dbj|BAI54727.1| peptide chain release factor 1 [Escherichia coli SE15]
 gi|281600635|gb|ADA73619.1| Peptide chain release factor 1 [Shigella flexneri 2002017]
 gi|284921023|emb|CBG34088.1| peptide chain release factor 1 [Escherichia coli 042]
 gi|290762109|gb|ADD56070.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324346|gb|EFE63768.1| peptide chain release factor 1 [Escherichia coli B088]
 gi|291426962|gb|EFE99988.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
 gi|291434546|gb|EFF07519.1| peptide chain release factor 1 [Escherichia coli B185]
 gi|291470066|gb|EFF12550.1| peptide chain release factor 1 [Escherichia coli B354]
 gi|294493866|gb|ADE92622.1| peptide chain release factor 1 [Escherichia coli IHE3034]
 gi|298277839|gb|EFI19353.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
 gi|300301228|gb|EFJ57613.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
 gi|300304663|gb|EFJ59183.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
 gi|300317504|gb|EFJ67288.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
 gi|300359542|gb|EFJ75412.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
 gi|300400374|gb|EFJ83912.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
 gi|300401315|gb|EFJ84853.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
 gi|300411045|gb|EFJ94583.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
 gi|300421749|gb|EFK05060.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
 gi|300449124|gb|EFK12744.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
 gi|300455557|gb|EFK19050.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
 gi|300463712|gb|EFK27205.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
 gi|300526318|gb|EFK47387.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
 gi|300530676|gb|EFK51738.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
 gi|300839170|gb|EFK66930.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
 gi|300846326|gb|EFK74086.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
 gi|301073722|gb|EFK88528.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
 gi|305852528|gb|EFM52976.1| peptide chain release factor 1 [Escherichia coli NC101]
 gi|306909752|gb|EFN40246.1| peptide chain release factor 1 [Escherichia coli W]
 gi|307553266|gb|ADN46041.1| peptide chain release factor 1 [Escherichia coli ABU 83972]
 gi|307627266|gb|ADN71570.1| peptide chain release factor 1 [Escherichia coli UM146]
 gi|308122207|gb|EFO59469.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
 gi|308922915|gb|EFP68429.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
 gi|309701510|emb|CBJ00817.1| peptide chain release factor 1 [Escherichia coli ETEC H10407]
 gi|310335995|gb|EFQ01195.1| peptide chain release factor 1 [Escherichia coli 1827-70]
 gi|312945841|gb|ADR26668.1| peptide chain release factor 1 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313649400|gb|EFS13831.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
 gi|315060462|gb|ADT74789.1| peptide chain release factor RF-1 [Escherichia coli W]
 gi|315135847|dbj|BAJ43006.1| peptide chain release factor 1 [Escherichia coli DH1]
 gi|315288568|gb|EFU47966.1| peptide chain release factor 1 [Escherichia coli MS 110-3]
 gi|315290789|gb|EFU50161.1| peptide chain release factor 1 [Escherichia coli MS 153-1]
 gi|315297345|gb|EFU56625.1| peptide chain release factor 1 [Escherichia coli MS 16-3]
 gi|315615947|gb|EFU96573.1| peptide chain release factor 1 [Escherichia coli 3431]
 gi|320181782|gb|EFW56692.1| Peptide chain release factor 1 [Shigella boydii ATCC 9905]
 gi|320188003|gb|EFW62670.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195779|gb|EFW70404.1| Peptide chain release factor 1 [Escherichia coli WV_060327]
 gi|320199250|gb|EFW73841.1| Peptide chain release factor 1 [Escherichia coli EC4100B]
 gi|320637363|gb|EFX07170.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           G5101]
 gi|320643225|gb|EFX12426.1| peptide chain release factor 1 [Escherichia coli O157:H- str.
           493-89]
 gi|320648162|gb|EFX16838.1| peptide chain release factor 1 [Escherichia coli O157:H- str. H
           2687]
 gi|320653996|gb|EFX22070.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659475|gb|EFX27044.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664612|gb|EFX31763.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153190|gb|EFZ39452.1| peptide chain release factor 1 [Escherichia coli EPECa14]
 gi|323162264|gb|EFZ48122.1| peptide chain release factor 1 [Escherichia coli E128010]
 gi|323168381|gb|EFZ54062.1| peptide chain release factor 1 [Shigella sonnei 53G]
 gi|323179274|gb|EFZ64844.1| peptide chain release factor 1 [Escherichia coli 1180]
 gi|323185627|gb|EFZ70988.1| peptide chain release factor 1 [Escherichia coli 1357]
 gi|323378974|gb|ADX51242.1| peptide chain release factor 1 [Escherichia coli KO11]
 gi|323937932|gb|EGB34196.1| peptide chain release 1 [Escherichia coli E1520]
 gi|323942490|gb|EGB38658.1| peptide chain release [Escherichia coli E482]
 gi|323947506|gb|EGB43510.1| peptide chain release 1 [Escherichia coli H120]
 gi|323949672|gb|EGB45558.1| peptide chain release [Escherichia coli H252]
 gi|323953934|gb|EGB49733.1| peptide chain release [Escherichia coli H263]
 gi|323962789|gb|EGB58367.1| peptide chain release [Escherichia coli H489]
 gi|323973391|gb|EGB68578.1| peptide chain release [Escherichia coli TA007]
 gi|323977218|gb|EGB72305.1| peptide chain release [Escherichia coli TW10509]
 gi|324006000|gb|EGB75219.1| peptide chain release factor 1 [Escherichia coli MS 57-2]
 gi|324015639|gb|EGB84858.1| peptide chain release factor 1 [Escherichia coli MS 60-1]
 gi|324017539|gb|EGB86758.1| peptide chain release factor 1 [Escherichia coli MS 117-3]
 gi|324117241|gb|EGC11148.1| peptide chain release [Escherichia coli E1167]
 gi|325497513|gb|EGC95372.1| peptide chain release factor 1 [Escherichia fergusonii ECD227]
 gi|326342759|gb|EGD66529.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1044]
 gi|326346388|gb|EGD70125.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1125]
 gi|330911076|gb|EGH39586.1| peptide chain release factor 1 [Escherichia coli AA86]
 gi|331038539|gb|EGI10759.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|331045281|gb|EGI17408.1| peptide chain release factor 1 [Escherichia coli M605]
 gi|331061036|gb|EGI33000.1| peptide chain release factor 1 [Escherichia coli TA143]
 gi|331065180|gb|EGI37075.1| peptide chain release factor 1 [Escherichia coli TA271]
 gi|331075680|gb|EGI46978.1| peptide chain release factor 1 [Escherichia coli H591]
 gi|331080331|gb|EGI51510.1| peptide chain release factor 1 [Escherichia coli H299]
 gi|332092251|gb|EGI97328.1| peptide chain release factor 1 [Shigella boydii 5216-82]
 gi|332098194|gb|EGJ03167.1| peptide chain release factor 1 [Shigella dysenteriae 155-74]
 gi|332101951|gb|EGJ05297.1| peptide chain release factor RF-1 [Shigella sp. D9]
 gi|332757864|gb|EGJ88191.1| peptide chain release factor 1 [Shigella flexneri 4343-70]
 gi|332759429|gb|EGJ89737.1| peptide chain release factor 1 [Shigella flexneri 2747-71]
 gi|332760305|gb|EGJ90595.1| peptide chain release factor 1 [Shigella flexneri K-671]
 gi|332767445|gb|EGJ97639.1| peptide chain release factor 1 [Shigella flexneri 2930-71]
 gi|333005050|gb|EGK24570.1| peptide chain release factor 1 [Shigella flexneri VA-6]
 gi|333005356|gb|EGK24874.1| peptide chain release factor 1 [Shigella flexneri K-218]
 gi|333007544|gb|EGK27022.1| peptide chain release factor 1 [Shigella flexneri K-272]
 gi|333019207|gb|EGK38494.1| peptide chain release factor 1 [Shigella flexneri K-304]
 gi|333019924|gb|EGK39196.1| peptide chain release factor 1 [Shigella flexneri K-227]
          Length = 360

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|91205113|ref|YP_537468.1| peptide chain release factor 1 [Rickettsia bellii RML369-C]
 gi|119361596|sp|Q1RJT5|RF1_RICBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91068657|gb|ABE04379.1| Peptide chain release factor RF-1 [Rickettsia bellii RML369-C]
          Length = 357

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 177/348 (50%), Positives = 247/348 (70%), Gaps = 1/348 (0%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +  +  ++ ++  ++S     + ++K ++EYA +  I+ KI  Y++ K E ++ +   
Sbjct: 8   DNLTKILGKYEDLSEKLSSGIGGEEFVKASKEYADLEDIVQKIKEYNKAKAELEEANNFK 67

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + D    ++ + E+  +E  +  LE  +   LLPKD  D KS I+EIRAGTGG EAA
Sbjct: 68  QEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEEAA 127

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF   LF MY+RYA L+ W+ E+LS  +   GGYKE+ A+I G+ VFS++KFESGVHRVQ
Sbjct: 128 LFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHRVQ 187

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TE+ GR+HTSAATVAVLPE  ++D+ +  +D+RIDT RASG+GGQHVNTTDSAVRI
Sbjct: 188 RVPETESQGRIHTSAATVAVLPEVEDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSAVRI 247

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ NR+ QIGSGDRSER
Sbjct: 248 THIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQERANNRRKQIGSGDRSER 307

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           IRTYNF QGR++DHRINLTLYK++ V+ G +D+ I  L+   +AK + 
Sbjct: 308 IRTYNFPQGRVSDHRINLTLYKIDEVINGQLDEFIEALIANDEAKKLS 355


>gi|224026398|ref|ZP_03644764.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM
           18228]
 gi|224019634|gb|EEF77632.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM
           18228]
          Length = 369

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 148/362 (40%), Positives = 227/362 (62%), Gaps = 14/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  I++    Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPNVIGDQKRYVKLTKEYKELGDIMAARKEYLQCLNGLEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D E++++A+ E  A E  I +LE EI  LL+P D  DD++ ILEIR GTGG 
Sbjct: 69  MMMAE--NDPEMKEMAREEAAACEARIPQLEEEIKLLLVPADPQDDRNAILEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+EV ++++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 127 EAAIFAGDLFRMYSKYCESKGWKLEVSNANEGAAGGFKEIICSVTGDKVYGTLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA   DV+I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 187 RVQRVPATETQGRVHTSAASVAVLPEAEPFDVEINEGEIKWDTFRSGGAGGQNVNKVESG 246

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 247 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 306

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 307 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 366

Query: 355 AS 356
           + 
Sbjct: 367 SE 368


>gi|312897943|ref|ZP_07757356.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
 gi|310620977|gb|EFQ04524.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
          Length = 361

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 171/359 (47%), Positives = 252/359 (70%), Gaps = 6/359 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  ++N+F ++E R+S+   +   D + KLT+E+A+++PII     Y        
Sbjct: 1   MFIDKVQAVENKFIDLEQRISDPSVIARQDEWQKLTKEHASLAPIIETFRKYKDVSATIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +I D  SD+E+  +A+ E+  + KE   LE E++ L+LPKD +DDK+ I+EIR G 
Sbjct: 61  DDKEIIAD-GSDAELTAMAKEELSELTKEQEALEEELHVLMLPKDPNDDKNVIMEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           GG EAA+F GDLFRMY +Y    + WK  ++SS+  + GGYKE++ ++ G GV+ ++K+E
Sbjct: 120 GGDEAAIFAGDLFRMYSKYIEKQKGWKASIISSNAPELGGYKEVIFSVEGDGVYGKLKYE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTS ATVAVLPEA ++++++ +ED+R+D  RASG+GGQHVN 
Sbjct: 180 SGVHRVQRVPVTESGGRIHTSTATVAVLPEAEDVEINLNMEDVRVDYFRASGAGGQHVNK 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+THIP+GI+V    E+SQ +NR +A++VL+ARL     +    E +  R+ Q+G
Sbjct: 240 TSSAVRMTHIPSGIVVECQDERSQLENRAKAVRVLKARLLAQAEEEANAEVTEARRSQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +GDRSER+RTYN+ QGR+TDHRINLTLYKLE ++ G ID+ I  L  A +A+++  A E
Sbjct: 300 TGDRSERVRTYNYPQGRVTDHRINLTLYKLENIMNGDIDEFIQALAEARRAELMKEAEE 358


>gi|325269739|ref|ZP_08136350.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608]
 gi|324987940|gb|EGC19912.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608]
          Length = 370

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 142/360 (39%), Positives = 219/360 (60%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+ R+ E+   +++   +     Y+KLT+EY  +  I+     Y       ++  
Sbjct: 9   QKLDGLEARYEEVSTLITDPSVIADQKRYVKLTKEYKDLGDIMDARRRYVNCLTTIKEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + SD+E++++A+ E+   E    ++E EI  LL+PKD +D K+  +EIR G GG 
Sbjct: 69  DIIA-NESDAEMKEMAREELSENEGLQPKIEEEIKLLLVPKDPEDGKNVQMEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+RY   + WK+ V S S+   GG+KEI   + G  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKRYCDKKGWKLSVTSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYIDDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  + G I ++I+ L  A  A+ +  
Sbjct: 308 TLVSTGDRSAKIRTYNFPQGRVTDHRIGFTTHDLQGFMNGDIQEMIDALTVAENAEKLKE 367


>gi|297585440|ref|YP_003701220.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10]
 gi|297143897|gb|ADI00655.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10]
          Length = 356

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 246/353 (69%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+ ++   + +   ++   KL   ++E + +   +     Y   K + +D  
Sbjct: 3   DRLESVENRYEQLNELLMDPAVMNDTDKLRDYSKEQSGLQETVEAYRQYKDIKSQVEDTK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ DH  D E+R++A++E+  +E E+ ELE ++  LL+PKD +DDK+ I+E+R   GG 
Sbjct: 63  EMLRDHLDD-EMREMAKMELDELETELGELEEKLRVLLIPKDPNDDKNVIVEVRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK +V+ +S+   GGYKEIV TI+G G +S+MKFE+G H
Sbjct: 122 EAALFAGDLYRMYHRYAESQGWKTDVIEASETGIGGYKEIVFTINGTGAYSKMKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTS ATVAVLPEA +++VDI  +DIR+D   +SG GGQ VNTT SA
Sbjct: 182 RVQRVPATESGGRIHTSTATVAVLPEAEDVEVDISEKDIRVDRFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E   NRK  +G+GDR
Sbjct: 242 VRLTHEPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKYQREAQAEYDENRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D+II  L+   Q++M+ +A
Sbjct: 302 SERIRTYNFPQSRVTDHRIGLTIQKLDQILEGKLDEIIEALIVEEQSRMMENA 354


>gi|312112637|ref|YP_003990953.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
 gi|311217738|gb|ADP76342.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
          Length = 358

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 239/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ R+ ++   + +   ++   KL   ++E + +   +     Y   +++  D  
Sbjct: 3   ERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVRKQLDDAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++ + E+  +E+   EL N++  LLLPKD +D+K+ I+EIRA  GG 
Sbjct: 63  AML-EEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK EV+ +S    GGYKEI+ TI+G+G +S++K+E+G H
Sbjct: 122 EAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPE  EI+V+I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVACLPEMEEIEVEINEKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQEARAEYDQTRKQAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ VL G +D+II  L+   QAK +  A+
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALILDDQAKKLEQAN 355


>gi|332342793|gb|AEE56127.1| peptide chain release factor protein PrfA [Escherichia coli UMNK88]
          Length = 360

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDIKPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|331002270|ref|ZP_08325789.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411364|gb|EGG90780.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 355

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 251/355 (70%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             + D+   + EI   ++     +    + KL +E + ++P++     Y + KQ ++D  
Sbjct: 3   DNLEDIVIHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKAKQLQEDAL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    +D E++++A+ E+   ++   EL  ++  LLLPKD +D+K+ +LEIRAG GG 
Sbjct: 63  EMLEM--NDDEMKEMAKEELAEGKRLEEELSEKLKILLLPKDPNDEKNIMLEIRAGAGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L+RMY  YA  + WKVE++  ++N  GGYKE+VA +SG+G +S++K+ESGVH
Sbjct: 121 EAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS A+VAV+PEA E+DV I + D+RID MRASG+GGQ VNTTDSA
Sbjct: 181 RVQRVPETESGGRIHTSTASVAVMPEAEEVDVQIDMNDVRIDVMRASGNGGQCVNTTDSA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LR++LY++E ++  +  +A+R+ QIG+GDR
Sbjct: 241 VRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRSKLYEIELEKKQSAEAADRRSQIGTGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRINLTLYKL+ ++ G I ++I+  + A QA  +   +E
Sbjct: 301 SEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQAAKLAKLNE 355


>gi|329965246|ref|ZP_08302176.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057]
 gi|328523266|gb|EGF50366.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057]
          Length = 370

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 148/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  +++    Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQILSGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + +D E+R++A+ E+   +    ELE +I  LL+P D  D ++ ILEIR GTGG 
Sbjct: 69  EIMA-NETDPEMREMAREELDTCQSRQPELEEQIKLLLVPADPQDSRNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + W++E+ S+++   GG+KEIV +I+G GV+  MK+ESGVH
Sbjct: 128 EAAIFAGDLFRMYTKYCETKGWRMEISSANEGSAGGFKEIVCSITGDGVYGTMKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|253702392|ref|YP_003023581.1| peptide chain release factor 1 [Geobacter sp. M21]
 gi|251777242|gb|ACT19823.1| peptide chain release factor 1 [Geobacter sp. M21]
          Length = 359

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 176/359 (49%), Positives = 258/359 (71%), Gaps = 6/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
               ++I +L+ RF E+E  +S+   +     + KL++E++ ++ +++    Y +   + 
Sbjct: 1   MSMFEKIAELERRFEELESLLSDPEVLANQTEFRKLSKEHSGLAELVAAYREYKKILSDI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   ++ +   D E+R++AQ E+L++E    ELE EI  LLLPKD +DDK+ +LEIRAG
Sbjct: 61  DDNKELLKEP--DQEMREMAQAELLSLEARREELEGEIKLLLLPKDPNDDKNVVLEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG E+ALF GDLFRMY R+A   +W+VE++S+S+++ GG+KE++A + G GVF+++K+E
Sbjct: 119 TGGDESALFAGDLFRMYSRFAETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TEA GR+HTSA TVAV+PEA ++D+DI   D++ID  R+SG+GGQHVNT
Sbjct: 179 SGTHRVQRVPETEAQGRIHTSACTVAVMPEAEDVDIDINPADLKIDVYRSSGAGGQHVNT 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG +V    E+SQ +NR +AMKVL++R+ D        + +A+RK Q+G
Sbjct: 239 TDSAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKSRILDNILMEQNAKLAADRKSQVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF QGR+TDHRI LTLY+L+ ++ G I +I + L   +Q + + + SE
Sbjct: 299 SGDRSERIRTYNFPQGRMTDHRIGLTLYRLDAIMAGDIAEIADSLRAHYQMEALQAQSE 357


>gi|189461883|ref|ZP_03010668.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136]
 gi|189431477|gb|EDV00462.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136]
          Length = 369

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 147/362 (40%), Positives = 226/362 (62%), Gaps = 14/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEEVSTLITDPNVISDQKRYVKLTKEYKELGDLMQARKEYLQCLNGLEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D E++++A+ E  A E  + +LE EI  LL+P D  DD++ ILEIR GTGG 
Sbjct: 69  MMMAE--NDPEMKEMAREEAAACEARLPQLEEEIKLLLVPADPQDDRNAILEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+EV S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 127 EAAIFAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA   DV+I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 187 RVQRVPATETQGRVHTSAASVAVLPEAEPFDVEINEGEIKWDTFRSGGAGGQNVNKVESG 246

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 247 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 306

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 307 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 366

Query: 355 AS 356
           + 
Sbjct: 367 SE 368


>gi|229823150|ref|ZP_04449219.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271]
 gi|229787316|gb|EEP23430.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271]
          Length = 359

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 241/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+  L  RF E+   +S+   +       +LT E A +SP ++KI  Y Q +QE +D  
Sbjct: 3   EQLDALIFRFEELHELLSDPEVISDSKRLRELTIEEADLSPKVAKIKRYKQVQQEIKDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D+++ +LA++E+  ++ E   LE EI  ++LP+D +D K+ I+EIR   GG 
Sbjct: 63  EMLGE-GLDADMAELAKMELAELKAEKPRLEEEIKVMMLPEDPNDGKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF GDL  MY RYA  + WKVEVL ++    GGYKE+   I+G  V+S++KFE+G H
Sbjct: 122 EAQLFAGDLLNMYTRYADSQGWKVEVLDANITGIGGYKEVSLMITGHKVYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTS ATV V+PEA E+D+D+   DIR+D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPETESQGRVHTSTATVVVMPEAEEVDLDLKDADIRVDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    E+SQ +NR +AMKVLRAR+YD+ +     E  +NRKL +G+GDR
Sbjct: 242 VRLTHLPTGVVVAMQDERSQLKNREKAMKVLRARVYDMLQSEAQAEYDSNRKLAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ Q R+TDHRI LT+ +L+ ++ G +D+II+ L+   Q + +   +
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQQLDAIMSGKLDEIIDGLVLFDQTQKLEELN 355


>gi|331652249|ref|ZP_08353268.1| peptide chain release factor 1 [Escherichia coli M718]
 gi|331050527|gb|EGI22585.1| peptide chain release factor 1 [Escherichia coli M718]
          Length = 360

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYADARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|968930|gb|AAC43437.1| peptide chain release factor 1 [Escherichia coli]
          Length = 360

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|312142772|ref|YP_003994218.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus']
 gi|311903423|gb|ADQ13864.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus']
          Length = 357

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 163/357 (45%), Positives = 242/357 (67%), Gaps = 6/357 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISP---IISKISIYDQKKQ 57
           M  L  +++  L +++ ++  ++S+   ++   K  +     +    I+ K   Y + KQ
Sbjct: 1   MFDLD-EKLDKLVDKYQDLNKKLSDPEVINDSSKYQKLLKKHAKLKKIVDKYKEYKEAKQ 59

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +D   +I +   D E+++LA++E+  ++    +LE E+  +LLP D +D+K+ I+EIR
Sbjct: 60  GIEDAEEMI-EMEDDPEMQELAELEIEELQPTKEKLEEELPIMLLPDDPNDEKNVIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           +G GG EAALF  DLFRMY RY+  + WKVEV++++ +  GGYKEI+ T+ G  V+  +K
Sbjct: 119 SGAGGDEAALFAADLFRMYSRYSENQGWKVEVMNANLSGVGGYKEIIFTVEGSEVYKYLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESGVHRVQRVP+TE+SGR+HTS ATVAVLPEA E+D+DI   D+RID  R+SG GGQ V
Sbjct: 179 YESGVHRVQRVPSTESSGRIHTSTATVAVLPEAEEVDIDIDPNDLRIDVYRSSGPGGQSV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH PT I V    EKSQH+N+ +AM++LRAR+ +        +R+  RK Q
Sbjct: 239 NTTDSAVRITHEPTEITVSCQDEKSQHKNKAKAMRILRARVQEKIESEKQAKRAEARKSQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +G+GDRSE+IRTYNF QGR++DHRINLT+++L+ +L G +  +I+ L+     K + 
Sbjct: 299 VGTGDRSEKIRTYNFPQGRVSDHRINLTVHQLDKILDGDLAPVIDALIEEDNIKRLE 355


>gi|119945323|ref|YP_943003.1| peptide chain release factor 1 [Psychromonas ingrahamii 37]
 gi|166223592|sp|A1SV89|RF1_PSYIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119863927|gb|ABM03404.1| bacterial peptide chain release factor 1 (bRF-1) [Psychromonas
           ingrahamii 37]
          Length = 363

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 158/362 (43%), Positives = 237/362 (65%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +  ++   + Y +LT+EYA +  ++     Y   + 
Sbjct: 1   MKASIVAKLEVLVERYEEVQALLGDPGTISDQNKYRELTKEYAQLEVVVLSFKKYQSAQN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +           + D ++R++A+ E+   +K + +L  ++  LLLPKD +DD++C LEIR
Sbjct: 61  DLAVAEM--MSDDDDPDMREMAKEEIKEAKKTVEKLAADLQILLLPKDPNDDRNCYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F G+LFRMY +YA  + W+VEV++S+ ++ GGYKE++A I G G +  MK
Sbjct: 119 AGAGGDEAAIFAGNLFRMYSKYAESKGWRVEVMNSNASEQGGYKELIAKIDGEGAYGIMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TV V+PE  E +       D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVVVMPEVPEAEAISINPADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+PTG +V    ++SQH+NR +AM VL++RL   E ++   E    R+ 
Sbjct: 239 VNKTDSAVRLTHLPTGTVVECQDQRSQHKNRAQAMSVLQSRLQQAEDEKSHAEEQTIRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYN+ QGR++DHRINLT+Y+L  VL+G ++ +  P+L   QA  + + 
Sbjct: 299 LVASGDRSERIRTYNYPQGRVSDHRINLTVYRLNEVLEGDLNALHEPILLEDQADKLAAL 358

Query: 356 SE 357
           S+
Sbjct: 359 SQ 360


>gi|325474790|gb|EGC77976.1| peptide chain release factor 1 [Treponema denticola F0402]
          Length = 361

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 176/355 (49%), Positives = 252/355 (70%), Gaps = 5/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ +L+ R  E+E  +     +     Y +   E++ +S ++ +   Y   +++ +D
Sbjct: 1   MKERLDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I +  SD+E++++A+ E+ ++E    + E ++  LL+P D  ++K+ I+EIR GTG
Sbjct: 61  SKLLIQEE-SDAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA ++ WK EVLS ++ + GGYKEI  +ISG+ V+  +++ESG
Sbjct: 120 GDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLRYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE SGR+HTSA TVAVLPEA E +++I  ED+RID MRA G GGQ VNTTD
Sbjct: 180 VHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG++V    EKSQ +N+ +AM+VLR+RLYD+E  +   ER+ NRK Q+GSG
Sbjct: 240 SAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAERAQNRKSQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF Q R+TDHRINLTLYKL+ V+QG +D++I+ L  A + +M+ +A
Sbjct: 300 DRSERIRTYNFPQNRVTDHRINLTLYKLDSVMQGSLDELIDALCIAAREEMMKAA 354


>gi|89900074|ref|YP_522545.1| peptide chain release factor 1 [Rhodoferax ferrireducens T118]
 gi|119361589|sp|Q21YY9|RF1_RHOFD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89344811|gb|ABD69014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodoferax
           ferrireducens T118]
          Length = 366

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 163/361 (45%), Positives = 229/361 (63%), Gaps = 5/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M     +Q+    +R  E+E  +S    +    +   L+ E+  +  + S+ + Y Q + 
Sbjct: 1   MKPFLRQQLARYTDRLGELEFLLSREDIMQDMKQFLLLSREHTEVGAVASRWARYQQLEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++  +AQ E+     E+++LENE+  +LLPKD DD ++  +EIR
Sbjct: 61  DLSGAQELLRGSVDDPDMTAMAQEEIDNASAELQKLENELQRMLLPKDPDDARNAFVEIR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL RMY RY   R WK E++S S ++ GGYKE+V  I G  V+  +K
Sbjct: 121 AGTGGDESALFAADLLRMYTRYCERRGWKAEIISESPSELGGYKEVVIKIEGDHVYGALK 180

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAVL      + + I   D+RIDT RASG+GGQH
Sbjct: 181 FESGGHRVQRVPVTETQGRIHTSACTVAVLAEPDEAVAIQINPADLRIDTYRASGAGGQH 240

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTGI+      +SQH N+ +A+KVL AR+++ +R   A + +A RK 
Sbjct: 241 INKTDSAVRITHLPTGIVAECQDGRSQHSNKAQALKVLTARIHEKDRSERAAKDAAERKG 300

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  +++G +DD++  L     A+ + + 
Sbjct: 301 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLTIMEGDLDDVVQALQAFEAAQQLAAL 360

Query: 356 S 356
            
Sbjct: 361 E 361


>gi|148656981|ref|YP_001277186.1| peptide chain release factor 1 [Roseiflexus sp. RS-1]
 gi|148569091|gb|ABQ91236.1| bacterial peptide chain release factor 1 (bRF-1) [Roseiflexus sp.
           RS-1]
          Length = 364

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 153/363 (42%), Positives = 224/363 (61%), Gaps = 8/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQ 57
           M      ++ ++  R+ E+   M++       ++L     E   + P++     Y   ++
Sbjct: 1   MALALIDKLANVAARYNELLDLMAQPEIATDPVRLQQYVREQRDLEPLVEAYQAYRDVER 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +D   ++  + +D E+R LAQ E+  + +    LE +I  LLLP+D +D K+ I+E+R
Sbjct: 61  QIEDTRFLLA-NETDPEVRQLAQEELDHLIERRARLETDIKVLLLPRDPNDSKNVIMELR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
            G GG EAALF  DLFRMY RYA  R W V+V+S+++N  GGYKEIV  I G G +SR+K
Sbjct: 120 QGEGGDEAALFAADLFRMYTRYAEQRGWDVDVISATENGPGGYKEIVFEIKGEGAYSRLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +E GVHRVQRVPATEA GR+HTS ATVAVLPE  E ++++   D R+D  R+SG GGQ V
Sbjct: 180 YEGGVHRVQRVPATEARGRIHTSTATVAVLPEIEETEIELNPSDYRVDVFRSSGHGGQGV 239

Query: 238 NTTDSAVRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           NTTDSAVRI + P      ++     +SQ +N+  A+ VLRARLY  E ++   E   +R
Sbjct: 240 NTTDSAVRIVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRRKELGESR 299

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
             Q+G+G+R+E+IRTYNF Q R+TDHRI      L  +L G +D +I+ L+ A  A+ + 
Sbjct: 300 LAQVGAGERAEKIRTYNFPQDRVTDHRIGQNFSNLPGILDGDLDRLIDALIIADNAERLE 359

Query: 354 SAS 356
           + +
Sbjct: 360 AVA 362


>gi|323698089|ref|ZP_08110001.1| peptide chain release factor 1 [Desulfovibrio sp. ND132]
 gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
          Length = 355

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 170/354 (48%), Positives = 256/354 (72%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +++ ++  +E  ++E    +    Y K+++ +A +S ++     Y Q  QE  D   
Sbjct: 4   KLEEIEEKYVLLEQELAEPDIFNDQERYKKVSKAHADLSEVVEAFRRYKQLSQELDDNRE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D EIR++A+ E+  +E E+ E+E ++  LLLPKD  D+K+ ILEIRAGTGG E
Sbjct: 64  MLNDA--DPEIREMAKAEIDDLEGELPEIEEQLKVLLLPKDPMDEKNIILEIRAGTGGDE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DL+RMY RYA +  WKVE +S++    GGYKE++A+ISG  V+S++K+ESG HR
Sbjct: 122 AALFAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASISGDKVYSKLKYESGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSA TVA++PEA E+D+D+  ED+R+D  R+SG GGQ VNTTDSA+
Sbjct: 182 VQRVPATESQGRIHTSAVTVAIMPEAEEVDIDLRPEDLRVDVFRSSGPGGQSVNTTDSAI 241

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIP+G+ ++   EKSQH+N+ +A+KVLR+RL  +E+ +   E+ ANR+ Q+GSGDRS
Sbjct: 242 RVTHIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKAKAEQEANRRSQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ QGR++DHRINLTL++L  +++G + D+ + L++  QA+ +    +
Sbjct: 302 ERIRTYNYPQGRVSDHRINLTLHQLPQIMEGELQDLTDALISYFQAEALKRQGD 355


>gi|16801748|ref|NP_472016.1| peptide chain release factor 1 [Listeria innocua Clip11262]
 gi|116873908|ref|YP_850689.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|20139333|sp|Q927V0|RF1_LISIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123466615|sp|A0ALM8|RF1_LISW6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|16415223|emb|CAC97913.1| prf1 [Listeria innocua Clip11262]
 gi|116742786|emb|CAK21910.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|313617102|gb|EFR89654.1| peptide chain release factor 1 [Listeria innocua FSL S4-378]
          Length = 358

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 164/355 (46%), Positives = 242/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y    ++  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQIDETR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+R++A+ E   ++KE  ELE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLGEKLDD-EMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLND 356


>gi|289435805|ref|YP_003465677.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172049|emb|CBH28595.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 358

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 240/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y     +  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++A+ E   ++KE  ELE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLSEKLDD-EMREMAKEEFTELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLND 356


>gi|313636275|gb|EFS02086.1| peptide chain release factor 1 [Listeria seeligeri FSL S4-171]
          Length = 358

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 162/355 (45%), Positives = 240/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y     +  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++A+ E   ++KE  ELE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLSEKLDD-EMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D++I+ L+   Q   +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEVIDALILEDQTSKLEHLND 356


>gi|295400673|ref|ZP_06810650.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294977254|gb|EFG52855.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 358

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 238/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ R+ ++   + +   ++   KL   ++E + +   +     Y    ++  D  
Sbjct: 3   ERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVCKQLDDAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++ + E+  +E+   EL N++  LLLPKD +D+K+ I+EIRA  GG 
Sbjct: 63  AML-EEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK EV+ +S    GGYKEI+ TI+G+G +S++K+E+G H
Sbjct: 122 EAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPE  EI+V+I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVACLPEMEEIEVEINEKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQEARAEYDQTRKQAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ VL G +D+II  L+   QAK +  A+
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALILDDQAKKLEQAN 355


>gi|218129333|ref|ZP_03458137.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697]
 gi|217988510|gb|EEC54831.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697]
          Length = 370

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 145/362 (40%), Positives = 225/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMKARKEYMQVLSGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + +D+E+R++A+ E+ A +    ELE +I  LL+P D  D ++ ILEIR G GG 
Sbjct: 69  EIIA-NETDAEMREMAREELDACQTRQPELEEQIKLLLVPADPQDSRNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+++ S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|256830555|ref|YP_003159283.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579731|gb|ACU90867.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
          Length = 353

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 180/354 (50%), Positives = 243/354 (68%), Gaps = 6/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L  ++ E+E  MS          Y K+ +++A +  I+    +Y    +E  +
Sbjct: 1   MVDKLESLAAKYRELEREMSTPEIFQDQERYRKIAKKHAELDEIVKAFELYKTLLREMAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  D  SD E+ ++AQ E++ ++  I E E  +  LL PKD  D+K+ ILEIRAGTG
Sbjct: 61  NQELAKD--SDPELCEMAQAEIVLLKAAIGEQEKVLKQLLTPKDPLDEKNIILEIRAGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFV D+FRMY RYA L  W+VEVLSSSD   GG+KEI+A++SG  V+S++K+ESG
Sbjct: 119 GEEAALFVADIFRMYSRYAELHSWRVEVLSSSDTGTGGFKEIIASVSGTNVYSKLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVPATE+ GR+HTSA TVA+LPEA E+DV I   DIR+D  R+SG GGQ VNTTD
Sbjct: 179 AHRVQRVPATESQGRIHTSAITVAILPEAEEVDVKIDPNDIRVDVFRSSGPGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+RITH+ TG++V    EKSQH+N+ +A+KVLR+RL    +         NRK Q+GSG
Sbjct: 239 SAIRITHLATGLVVICQDEKSQHKNKAKALKVLRSRLLQAAQDETKKAYDDNRKSQVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYN+ QGR+TDHRINLTLY L+  ++G+IDDII+ L+  +QA+ +  
Sbjct: 299 DRSERIRTYNYPQGRVTDHRINLTLYNLDQAMEGHIDDIIDGLVQHYQAEAMKE 352


>gi|157827554|ref|YP_001496618.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
 gi|166223596|sp|A8GXI1|RF1_RICB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157802858|gb|ABV79581.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
          Length = 357

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 177/348 (50%), Positives = 247/348 (70%), Gaps = 1/348 (0%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +  +  ++ ++  ++S     + ++K ++EYA +  I+ KI  Y++ K E ++ +   
Sbjct: 8   DNLTKILGKYEDLSEKLSSGIGGEEFVKASKEYADLEDIVQKIKEYNKAKAELEEANNFK 67

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + D    ++ + E+  +E  +  LE  +   LLPKD  D KS I+EIRAGTGG EAA
Sbjct: 68  QEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEEAA 127

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF   LF MY+RYA L+ W+ E+LS  +   GGYKE+ A+I G+ VFS++KFESGVHRVQ
Sbjct: 128 LFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHRVQ 187

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TE+ GR+HTSAATVAVLPE  ++D+ +  +D+RIDT RASG+GGQHVNTTDSAVRI
Sbjct: 188 RVPETESQGRIHTSAATVAVLPEVEDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSAVRI 247

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ NR+ QIGSGDRSER
Sbjct: 248 THIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQERANNRREQIGSGDRSER 307

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           IRTYNF QGR++DHRINLTLYK++ V+ G +D+ I  L+   +AK + 
Sbjct: 308 IRTYNFPQGRVSDHRINLTLYKIDEVINGQLDEFIEALIANDEAKKLS 355


>gi|306833419|ref|ZP_07466546.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
 gi|304424189|gb|EFM27328.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
          Length = 359

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 158/359 (44%), Positives = 232/359 (64%), Gaps = 4/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++ L++E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEANTRETVTVYREYKQILQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   +I D   D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  EDAEEMIKDAGGDPELEEMAKEELKDSKASKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF  DL +MY++YA  + WK +V+ +S N  GG KE+V  +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFASDLLQMYQKYAENQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   NE+ A RK  IG
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K +   ++
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQTKKLEELNQ 359


>gi|317153066|ref|YP_004121114.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943317|gb|ADU62368.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
          Length = 355

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 250/354 (70%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ D++ ++ ++E  +++    +    Y K+++ ++ +S ++     Y +  ++  +   
Sbjct: 4   KLEDIEIKYDKLEYELAQPGIFNDQERYKKVSKAHSDLSDVVVLYREYKKCSKDLAENRE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   D EIR++A+ E+  +E  I  LE +I  LLLP D  D+K+ ILEIRAGTGG E
Sbjct: 64  MSHDP--DPEIREMAKAEISELEDRIETLEEKIKILLLPSDPMDEKNIILEIRAGTGGDE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF  DL+RMY RYA   +WKVE +SS+    GG KE++A+I+G  V+S++K+ESG HR
Sbjct: 122 AGLFAADLYRMYTRYAEANRWKVEEMSSNVTGSGGLKEVIASIAGDKVYSKLKYESGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTS  TVA++PEA E+D+D+  ED+R+D  R+SG GGQ VNTTDSA+
Sbjct: 182 VQRVPATESQGRIHTSVVTVAIMPEAEEVDIDLRPEDVRVDVFRSSGPGGQSVNTTDSAI 241

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG+ ++   EKSQH+N+ +A+KVLR+RL  +E+ +   E  A R++Q+GSGDRS
Sbjct: 242 RVTHIPTGMIVICQDEKSQHKNKAKALKVLRSRLLQLEQDKAKAEEDAARRIQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR++DHRINLTL+KL  +L+G +DD+ + L+  +QA+ +    +
Sbjct: 302 ERIRTYNFPQGRVSDHRINLTLHKLPQILEGELDDLTDALIGHYQAEAMKRQGD 355


>gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
 gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
          Length = 361

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 178/363 (49%), Positives = 245/363 (67%), Gaps = 8/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++ +L +R  E+ + ++E   ++    +  L++EYA I PI+     Y Q  +
Sbjct: 1   MKNSIRTKLENLSDRLQELNVLLTEPEIINNQNQFRSLSKEYAEIQPIVECFDKYRQNSE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
            +     ++ D   D+++R LA+ E+   + E   L+NE+  LLLPKD DD+ +  LE+R
Sbjct: 61  TQATAIEMLRDE--DADMRALAEEELSQAQTENERLDNELQLLLLPKDPDDNSNTFLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDL RMY RYA  + W++E+LS +  + GG+KEI+  I+G GV+SR K
Sbjct: 119 AGTGGDEAALFAGDLVRMYSRYAEQQNWQIEILSQNHGEHGGFKEIIMRITGEGVYSRFK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PE  E++       DIR DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVAIMPEVEEVEEIEINNADIREDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+R+TH+PTGI++    E+SQH+NR RA  +L+ARL   ER+R   E++  R+ 
Sbjct: 239 VNKTDSAIRLTHLPTGIVIECQDERSQHKNRARAKSLLQARLLAAERERQRAEKAETRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
            +GSGDRSERIRTYNF QGRITDHRI LTLYKL+ +L QG +DD+I PL   HQ  ++ S
Sbjct: 299 LVGSGDRSERIRTYNFPQGRITDHRIGLTLYKLDDILKQGNLDDLIEPLKREHQMDLLAS 358

Query: 355 ASE 357
             +
Sbjct: 359 MGD 361


>gi|222152015|ref|YP_002561175.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
 gi|254790887|sp|B9E8G1|RF1_MACCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222121144|dbj|BAH18479.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
          Length = 358

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 246/354 (69%), Gaps = 4/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V    KL   ++E A +   +     Y + KQ+ ++  
Sbjct: 3   DQLEIVEQRYEQLNELLSDPDIVSDTDKLREYSKEQADLQETVEVYREYKEVKQQLEEAL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+  SD++ +++ + E+  ++ +I ELE  +  LL+PKD  DDK+ ++EIR   GG 
Sbjct: 63  EMMGEA-SDADEQEMIKEEINTLKPQIPELEERMKLLLIPKDPMDDKNVVMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDLFRMY R++  + WK+EV+ +++ D GG+KEI   I G+G +S++KFE+G H
Sbjct: 122 EANIFAGDLFRMYSRFSEEQGWKIEVMETNEADHGGFKEISFIIIGKGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GR+HTS ATVAVLPE  +++++I  ED+RI+T R+SGSGGQHVNTTDSA
Sbjct: 182 RVQRIPTTESGGRIHTSTATVAVLPEVEDVEIEIRQEDLRIETYRSSGSGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITHIPTGI+ TSSEKSQ +NR +A+K+L+ R++D + +    + S  RK  +G+GDRS
Sbjct: 242 VRITHIPTGIVATSSEKSQIKNREKALKLLKTRVFDAKLQEEQAKYSEQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LT+ KL+ +++G + +II+ L  A Q   + + ++
Sbjct: 302 ERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGKLGEIIDALTIAEQTSKLEALND 355


>gi|313631914|gb|EFR99059.1| peptide chain release factor 1 [Listeria seeligeri FSL N1-067]
          Length = 358

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 240/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y     +  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++A+ E   ++KE  ELE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLSEKLDD-EMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLND 356


>gi|313622330|gb|EFR92817.1| peptide chain release factor 1 [Listeria innocua FSL J1-023]
          Length = 358

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 164/355 (46%), Positives = 242/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y    ++  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNINEQIDETR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+R++A+ E   ++KE  ELE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLGEKLDD-EMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLND 356


>gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
 gi|189039991|sp|B0TR27|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
          Length = 361

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 248/362 (68%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S++  +     +  L++EY+ +  ++     Y Q ++
Sbjct: 1   MKDSVIRKLEGLLERNEEVLALLSDASIIADQERFRALSKEYSQLEDVVRTFKSYQQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E++++AQ E  A ++ I  LE E+  LLLPKD +DD +C +EIR
Sbjct: 61  DFESAKEMM--EEDDPELKEMAQEEYKATKEAIATLEAELQILLLPKDPNDDNNCFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  ++W++EV+++++ + GG+KE++A ISG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VLPE  E + ++I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYN+ QGR+++HRINLTLY+L   ++G ID ++ PL+  +QA M+ + 
Sbjct: 299 LVSSGDRSERIRTYNYPQGRVSEHRINLTLYRLNEFMEGDIDCVVEPLIQENQADMLAAL 358

Query: 356 SE 357
            E
Sbjct: 359 GE 360


>gi|253574239|ref|ZP_04851581.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846716|gb|EES74722.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 355

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 155/356 (43%), Positives = 240/356 (67%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +    +   +L   ++E + + P     + Y     E + 
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKRLRDYSKEQSDLQPAYEAYTEYKNVIGELEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  +   D E+R++ ++E+  +    + LE +I  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKAMQAEKLDD-EMREMVKMEIEELTARQQALEEKIRILLLPKDPNDDKNVIVEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA  + W+VEV+  +++D GG+KE++  I+G+G +S++K+ESG
Sbjct: 120 GDEAALFAADLYRMYTRYADSQGWRVEVMDMNESDLGGFKEVIFMINGKGAYSKLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+PATE+ GR+HTS +TVAVLPE  E+D++I  +DIR+DT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPATESGGRIHTSTSTVAVLPEVEEVDIEILDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+      KSQ+ N+ +A++VLRAR+YD++R+    + +  RK ++G+G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIYDMKRQEEEAKYAGERKSKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q R+TDHRI LTL+KL+ V+ G +++I++ L  A QA+++    
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLHKLDQVMNGELEEIVSALTIAEQAELMEKGE 355


>gi|167766740|ref|ZP_02438793.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1]
 gi|167711494|gb|EDS22073.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1]
          Length = 366

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 165/355 (46%), Positives = 247/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L +R   +   +++       + +  L +E   ++PI+ K   Y  +KQ  +D  
Sbjct: 12  DKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIEDSL 71

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+++LA+ E+   +  +  LE E+  LL+PKD  DDK+ I+E+RAG GG 
Sbjct: 72  -MLLEEESDEEMKELAKEELNESKANVERLEEELKILLIPKDPMDDKNIIVEMRAGAGGD 130

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LFV D+ RMY  YA  ++WKV  LS +++  GG+KE+V  +SG+G +SR K+ESGVH
Sbjct: 131 EAGLFVADVARMYRSYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYSRFKYESGVH 190

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE+ GR+HTS  TVA++PE  +++V+I + D + D  RASG+GGQ VNTTDSA
Sbjct: 191 RVQRIPATESGGRIHTSTITVAIMPEVEDVEVEIDMNDCKFDVFRASGNGGQCVNTTDSA 250

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    EKSQ +N+ +A+KVLR+RLY++E+++  +E +A RK QIG+GDR
Sbjct: 251 VRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDEEAAKRKSQIGTGDR 310

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+ QGR+TDHRI LTL+KL+ ++ G +D++I+ L  A QA  + +  E
Sbjct: 311 SEKIRTYNYPQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTAADQAAKLSNMEE 365


>gi|227538599|ref|ZP_03968648.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241518|gb|EEI91533.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 357

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 225/354 (63%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K R+ E+E  +S   ++     + KL +EY  +  I+ +  IY         
Sbjct: 1   MLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLGKIVDQYHIYKNMVSNIDA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++  +  D E+R++A+ E+  +  +  E E EI  +L+PKD +D K+ I+EIR GTG
Sbjct: 61  NKDILA-NEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY R+   + W+ EV+  ++   GGYKE++  + G   + ++K+ESG
Sbjct: 120 GDEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGDDAYGQLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAA+VAVLPEA ++DV++   DI + T R+ G+GGQ+VN  +
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVAVLPEAEDVDVELNPGDIEMQTSRSGGAGGQNVNKVE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           + V++TH P+GI+V    E+SQ  NR  AM++LR +LY++E ++   + +A RK  + +G
Sbjct: 240 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKKHGDTAAKRKTMVSTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRS ++RTYN+ QGR+T+HRI LTLY L  V+ G I  II+ L  A  A+ +  
Sbjct: 300 DRSAKVRTYNYPQGRVTEHRIGLTLYNLPAVMDGDIQGIIDALQFAENAEKMKE 353


>gi|302346475|ref|YP_003814773.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC
           25845]
 gi|302150829|gb|ADK97090.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC
           25845]
          Length = 370

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 142/360 (39%), Positives = 218/360 (60%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+ R+ E+   +++   +     Y+KLT+EY  +  I+     Y       ++  
Sbjct: 9   QKLDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARRRYINCLTTIKEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + SD+E++++A+ E+   E     LE EI  LL+PKD +D K+  +EIR G GG 
Sbjct: 69  DIIA-NESDAEMKEMAREELSENEALQPALEEEIKLLLVPKDPEDAKNVQMEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+RY   + WK+ + S S+   GG+KEI   + G  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKRYCDKKGWKLSITSVSEGTAGGFKEIDFAVEGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYVDDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGR+TDHRI  T + L+  + G I D+I+ L  A  A+ +  
Sbjct: 308 TLVSTGDRSAKIRTYNYPQGRVTDHRIGFTTHDLQGFMNGEIQDMIDALTVAENAEKLKE 367


>gi|197120070|ref|YP_002140497.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
 gi|197089430|gb|ACH40701.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
          Length = 359

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 175/359 (48%), Positives = 257/359 (71%), Gaps = 6/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
               ++I +L+ RF E+E  +S+   +     + KL++E++ ++ +++    Y +   + 
Sbjct: 1   MSMFEKIAELERRFEELESLLSDPEVLGNQTEFRKLSKEHSGLAELVAAYREYKKILSDI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   ++ +   D E+R++AQ E+L++E     LE EI  LLLPKD +DDK+ +LEIRAG
Sbjct: 61  DDNKELLKEP--DQEMREMAQAELLSLEARREVLEGEIKLLLLPKDPNDDKNVVLEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG E+ALF GDLFRMY R+A   +W+VE++S+S+++ GG+KE++A + G GVF+++K+E
Sbjct: 119 TGGDESALFAGDLFRMYSRFAETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TEA GR+HTSA TVAV+PEA ++D+DI   D++ID  R+SG+GGQHVNT
Sbjct: 179 SGTHRVQRVPETEAQGRIHTSACTVAVMPEAEDVDIDINPADLKIDVYRSSGAGGQHVNT 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG +V    E+SQ +NR +AMKVL++R+ D        + +A+RK Q+G
Sbjct: 239 TDSAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKSRILDNIVMEQNAKLAADRKSQVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF QGR+TDHRI LTLY+L+ ++ G I +I + L   +Q + + + SE
Sbjct: 299 SGDRSERIRTYNFPQGRMTDHRIGLTLYRLDAIMAGDIAEIADSLRQHYQMEALQAQSE 357


>gi|315283708|ref|ZP_07871812.1| peptide chain release factor 1 [Listeria marthii FSL S4-120]
 gi|313612648|gb|EFR86686.1| peptide chain release factor 1 [Listeria marthii FSL S4-120]
          Length = 358

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 164/355 (46%), Positives = 242/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y    ++  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNEQINETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+R++A+ E   ++KE  ELE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLGEKLDD-EMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   ++
Sbjct: 302 SERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLND 356


>gi|238755548|ref|ZP_04616886.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
 gi|238706228|gb|EEP98607.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
          Length = 360

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 248/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+E  + ++  +   D +  L+ EYA ++ +      +   ++
Sbjct: 1   MKSSIVAKLEALQERHEEVEAHLGDATVIADQDRFRALSREYAQLTDVTRCFKEWQSVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+         LE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIETAEMML----DDPEMREMAQEELKDARTRSEALEQQLQVLLLPKDPDDERGCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVEV+S+SD + GGYKEI+A +SG GV+ ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEVMSASDGEHGGYKEIIAKVSGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG++V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|312869581|ref|ZP_07729732.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
 gi|311094867|gb|EFQ53160.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
          Length = 362

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 236/353 (66%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E  ++   + K + Y Q  Q  +D  
Sbjct: 8   DKLQAVTDRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQTIKDDE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D ++  + + E+   +    +LE E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 68  EMLRETN-DPDLAAMTKDELAESKDRQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+ MY  YA  + WKVEV+  ++ + GG+KEI   I+G  V+S++KFE+G H
Sbjct: 127 EASLFAADLYNMYLHYAEKQGWKVEVVDKNETEVGGFKEIALMITGNNVYSKLKFENGAH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PEA ++DVDI  +DIR+D  R+SG+GGQHVN T SA
Sbjct: 187 RVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 246

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L++R+YD  +++  +     RK  IG+GDR
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQSAYDEQRKNAIGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II  L+ A Q + +   
Sbjct: 307 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGELDEIIEALIVADQTEKLEQL 359


>gi|218689158|ref|YP_002397370.1| peptide chain release factor 1 [Escherichia coli ED1a]
 gi|254790882|sp|B7MTZ5|RF1_ECO81 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218426722|emb|CAR07559.1| peptide chain release factor RF-1 [Escherichia coli ED1a]
          Length = 360

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 251/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYCLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|157370232|ref|YP_001478221.1| peptide chain release factor 1 [Serratia proteamaculans 568]
 gi|166977369|sp|A8GDA3|RF1_SERP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157321996|gb|ABV41093.1| peptide chain release factor 1 [Serratia proteamaculans 568]
          Length = 361

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 244/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++  +   D +  L+ EYA ++ +      + + + +      
Sbjct: 8   KLEALQERHEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLEWRKVQDDLATAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELKDAKAATEELEQQLQVLLLPKDPDDERDCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A +SG GVF ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVFGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+P   E +  +I   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPAVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +     ++ R+  +G+GDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGTGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + S
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLAALS 357


>gi|332298739|ref|YP_004440661.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
 gi|332181842|gb|AEE17530.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
          Length = 359

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 246/355 (69%), Gaps = 5/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             K++ +L  R+AE+   + +         Y ++  E++ +S ++   + Y +  Q   +
Sbjct: 1   MLKKLEELSKRYAELNDMIQDPELVRDPKRYKEIMREHSHLSQVMDSYAEYKEVLQGISE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I +   D +++++A+ E+ A+E  + E+E+ +  LL+P D  ++K+ I+EIR G G
Sbjct: 61  AQHLITEE-DDHDMKEMAREELKALESRVPEMESALKMLLIPPDPLEEKNIIMEIRGGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  DLFRMY RYA ++ WK E++ +S+ + GGYKEI  +ISG+ V+  +++E G
Sbjct: 120 GDEASLFAADLFRMYTRYAEIKNWKYEIMDASETEVGGYKEISFSISGKFVYGSLRWEGG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+HTSA TVAVLPEA E +++I  ED+R+D MRA G GGQ VNTTD
Sbjct: 180 VHRVQRVPETEAQGRIHTSAVTVAVLPEAEETEIEIRPEDLRVDVMRAGGPGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +N+ +AM+VLRARL+D+E  +   ERSA RK  +GSG
Sbjct: 240 SAVRLTHLPTGLVVIQQDEKSQIKNKAKAMRVLRARLFDLEESKKQAERSAARKSMVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF Q R+TDHRINLTLYKL+  +QG +D++++ L  + +   + SA
Sbjct: 300 DRSERIRTYNFPQNRVTDHRINLTLYKLDQFMQGNLDEMLDALNISAKEAALKSA 354


>gi|313885157|ref|ZP_07818909.1| peptide chain release factor 1 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619848|gb|EFR31285.1| peptide chain release factor 1 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 359

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 236/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+  L  R+ E+   +S+   +   +   +LT E A + P + KI  Y + + E +D  
Sbjct: 3   EQLDSLLIRYDEVNELLSDPIVIADSNRLRELTIEEADLRPKVEKIRRYKEVEAEIEDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + + D +I  +A+ E+ +++ E  +L+ +I  L+LP+D +D K+ I+EIR   GG 
Sbjct: 63  AMLSEESDD-DILAMAKEELASLKAENEQLQEDIKLLMLPEDPNDGKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF GDL  MY +YA  + WK EVL ++    GGYKE+   I+G  V+S++KFE+G H
Sbjct: 122 EAQLFAGDLLNMYTKYADKQGWKTEVLDANITGIGGYKEVTLMITGNKVYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTS ATV V+PEA EID ++   DIR+D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPQTESQGRVHTSTATVVVMPEAEEIDFELDENDIRVDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPT  +V    E+SQ +NR +AMK+LRAR+YD  R +  +E  + RKL++G+GDR
Sbjct: 242 VRLTHIPTNTVVAMQDERSQIKNREKAMKILRARVYDQVRSQAQSEYDSERKLKVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL +L+ VL G +D+II+ L+   Q++ +   +
Sbjct: 302 SERIRTYNFPQSRVTDHRIGLTLQQLDSVLSGNLDEIIDALVLYDQSQKLEELN 355


>gi|281425822|ref|ZP_06256735.1| peptide chain release factor 1 [Prevotella oris F0302]
 gi|281400083|gb|EFB30914.1| peptide chain release factor 1 [Prevotella oris F0302]
          Length = 370

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 144/360 (40%), Positives = 223/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++RF E+   +++   +     Y+KLT+E+  +  I++    Y       ++  
Sbjct: 9   EKLDGLESRFEEVSTLITDPDVIADQTRYVKLTKEWKDLGDIMNARKRYIACLDSIREAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SDS+++D+A+ E+   E    +LE EI  LL+PK+ +D K+  +EIRAGTGG 
Sbjct: 69  DILA-NESDSDMKDMAREELQQNETLQPQLEEEIKLLLIPKEPEDAKNVQMEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+R+  ++ W + V   S+   GGYKEI   ISG  V+  MK+ESGVH
Sbjct: 128 EAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAISGTDVYGTMKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GR+ TSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPVTESNGRMQTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   ++D E ++  ++ ++ RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYVDDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  L G I D+I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNFPQGRVTDHRIGYTTHDLQGFLGGNIQDMIDALTVAENAEKLKE 367


>gi|15925108|ref|NP_372642.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927692|ref|NP_375225.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283771|ref|NP_646859.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486911|ref|YP_044132.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652140|ref|YP_186925.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160795|ref|YP_494718.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196022|ref|YP_500835.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|148268569|ref|YP_001247512.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394633|ref|YP_001317308.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|151222234|ref|YP_001333056.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156980433|ref|YP_001442692.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161510323|ref|YP_001575982.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141637|ref|ZP_03566130.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315787|ref|ZP_04839000.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253731044|ref|ZP_04865209.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733048|ref|ZP_04867213.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006906|ref|ZP_05145507.2| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793876|ref|ZP_05642855.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
 gi|258407044|ref|ZP_05680194.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
 gi|258422066|ref|ZP_05684983.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
 gi|258433565|ref|ZP_05688638.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
 gi|258440460|ref|ZP_05690630.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
 gi|258445668|ref|ZP_05693846.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
 gi|258450122|ref|ZP_05698217.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
 gi|258453423|ref|ZP_05701405.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
 gi|262049285|ref|ZP_06022160.1| peptide chain release factor 1 [Staphylococcus aureus D30]
 gi|262052620|ref|ZP_06024814.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
 gi|269203754|ref|YP_003283023.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894762|ref|ZP_06302988.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
 gi|282923106|ref|ZP_06330791.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
 gi|282929042|ref|ZP_06336627.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
 gi|284025152|ref|ZP_06379550.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           132]
 gi|294850088|ref|ZP_06790825.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
 gi|295407048|ref|ZP_06816850.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
 gi|296275403|ref|ZP_06857910.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297210061|ref|ZP_06926454.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246047|ref|ZP_06929904.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
 gi|300910424|ref|ZP_07127876.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304379299|ref|ZP_07362038.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54039049|sp|P66019|RF1_STAAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54039050|sp|P66020|RF1_STAAW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54041594|sp|P66018|RF1_STAAM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56749376|sp|Q6G7J2|RF1_STAAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153097|sp|Q5HE82|RF1_STAAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361613|sp|Q2FF10|RF1_STAA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361614|sp|Q2FWE0|RF1_STAA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223609|sp|A7X4W4|RF1_STAA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172048990|sp|A6QIW2|RF1_STAAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039994|sp|A6U3K3|RF1_STAA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039995|sp|A5IUR3|RF1_STAA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039996|sp|A8YY83|RF1_STAAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13701912|dbj|BAB43204.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247891|dbj|BAB58280.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21205213|dbj|BAB95907.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245354|emb|CAG43829.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286326|gb|AAW38420.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87126769|gb|ABD21283.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203580|gb|ABD31390.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741638|gb|ABQ49936.1| bacterial peptide chain release factor 1 (bRF-1) [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149947085|gb|ABR53021.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150375034|dbj|BAF68294.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722568|dbj|BAF78985.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160369132|gb|ABX30103.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253725232|gb|EES93961.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728956|gb|EES97685.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787848|gb|EEV26188.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
 gi|257841377|gb|EEV65821.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
 gi|257841966|gb|EEV66398.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
 gi|257849296|gb|EEV73275.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
 gi|257852529|gb|EEV76447.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
 gi|257855507|gb|EEV78444.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
 gi|257856596|gb|EEV79502.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
 gi|257864404|gb|EEV87150.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
 gi|259159490|gb|EEW44540.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
 gi|259162650|gb|EEW47217.1| peptide chain release factor 1 [Staphylococcus aureus D30]
 gi|262076044|gb|ACY12017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941717|emb|CBI50124.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282589348|gb|EFB94440.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
 gi|282593297|gb|EFB98294.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
 gi|282762850|gb|EFC02984.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
 gi|285817782|gb|ADC38269.1| Peptide chain release factor 1 [Staphylococcus aureus 04-02981]
 gi|294823036|gb|EFG39468.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
 gi|294968073|gb|EFG44100.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
 gi|296885261|gb|EFH24201.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177046|gb|EFH36301.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
 gi|300888266|gb|EFK83457.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302751999|gb|ADL66176.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342158|gb|EFM08058.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312830470|emb|CBX35312.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128789|gb|EFT84789.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196948|gb|EFU27290.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140710|gb|EFW32562.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143686|gb|EFW35463.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314803|gb|AEB89216.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723967|gb|EGG60491.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21189]
 gi|329726324|gb|EGG62792.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729314|gb|EGG65722.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21193]
          Length = 358

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 246/353 (69%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  D+ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELADIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E  ++ + E   I+ E+  LE E+  LL+PKD +DDK  I+EIRA  GG 
Sbjct: 63  EMLSET-DDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA  + +K E++ +S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G++++II+ L  + Q   +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKELN 354


>gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel]
 gi|75432752|sp|Q5FGZ2|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81557311|sp|Q5HB80|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden]
 gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 359

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 182/358 (50%), Positives = 263/358 (73%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP--SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 + +L  +F +++  + +    SV++++  ++EY+ + PIIS I  Y+  +++ +
Sbjct: 1   MSFDSGLEELSEKFYKLKHLLEDPSQLSVESFVNASKEYSELLPIISVIDEYNAVQKDIK 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +I +  +D+E+++LA+ E   ++K++ ++++++   LLPKD DD ++ ILEIRAGT
Sbjct: 61  DLQELINNQETDTELKNLAKEEFYELQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFV DL+RMY +YA  + WK+E ++SS    GG+KE+   +SG  VF+++KFES
Sbjct: 121 GGEEAALFVTDLYRMYIKYAEKKNWKIEQINSSSTGIGGHKEVSLCVSGSNVFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEASGR+HTSAATVAVLPE  E+D+ I  +D+RID  R+SG GGQ VNTT
Sbjct: 181 GVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+GI+V    EKSQH+N+ +A+KVLRARLYD+E+++   E S  RK QIGS
Sbjct: 241 DSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYDLEKQKRDAEISQLRKSQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF Q RITDHRINLTLY+LE ++ +G +D++I  L+   +A  + + +
Sbjct: 301 GDRSERIRTYNFPQSRITDHRINLTLYRLEDIMKEGDLDELIEALIAEDEANKLKNLN 358


>gi|325856854|ref|ZP_08172352.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A]
 gi|327314543|ref|YP_004329980.1| peptide chain release factor 1 [Prevotella denticola F0289]
 gi|325483227|gb|EGC86204.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A]
 gi|326945459|gb|AEA21344.1| peptide chain release factor 1 [Prevotella denticola F0289]
          Length = 370

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 142/360 (39%), Positives = 220/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+ R+ E+   +++   +     Y+KLT+EY  +  I+     Y       ++  
Sbjct: 9   QKLDGLEARYEEVSTLITDPSVIADQKRYVKLTKEYKDLGDIMDARRRYVNCLTTIKEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + SD+E++++A+ E+   E+   ++E EI  LL+PKD +D K+  +EIR G GG 
Sbjct: 69  DIIA-NESDAEMKEMAREELSENEELQPKIEEEIKLLLVPKDPEDGKNVQMEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+RY   + WK+ V S S+   GG+KEI   + G  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKRYCDKKGWKLSVTSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYIDDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  + G I ++I+ L  A  A+ +  
Sbjct: 308 TLVSTGDRSAKIRTYNFPQGRVTDHRIGFTTHDLQGFMNGDIQEMIDALTVAENAEKLKE 367


>gi|325847800|ref|ZP_08170022.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480818|gb|EGC83871.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 357

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 162/357 (45%), Positives = 237/357 (66%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + +  ++  F E+E ++++   +   D + K++ EY  + PI+ K +     +   ++
Sbjct: 1   MLENLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D E+ DL + E+   +K + +   ++  LL+P+D +D K  I+EIRAG G
Sbjct: 61  NTELLKEAE-DKEMIDLLKAEIDENKKNLEKYNEDLKILLIPQDPNDHKDVIVEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF G+L+RMY  YA  + +K E +  S    GG KE    + G G +S++K+ESG
Sbjct: 120 GEEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPEA E+D+ I   DIR D  R+SG+GGQ VNTTD
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVLPEADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++V    EKSQ +N+ +AM+VLRARLY++E ++   E S NRK Q+G+G
Sbjct: 240 SAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEMEEEKRQKEISDNRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYN+ QGRITDHRIN T+Y+L+  L G I+++I+ L+T  Q + + +  E
Sbjct: 300 DRSERIRTYNYPQGRITDHRINKTIYQLDDFLDGNIEEMIDSLITEDQTRKLKTMGE 356


>gi|259503694|ref|ZP_05746596.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
 gi|259168326|gb|EEW52821.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
          Length = 362

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 236/353 (66%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E  ++   + K + Y Q  Q  +D  
Sbjct: 8   DKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQTIKDDE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D ++  + + E+   ++   +LE E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 68  EMLRET-DDPDLAAMTKDELAESKERQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+ MY  YA  + WKVEV+  S+ + GG+KEI   I+G  V+S++KFE+G H
Sbjct: 127 EASLFAADLYNMYLHYAEKQGWKVEVVDKSETEVGGFKEIALMITGTNVYSKLKFENGAH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PEA ++DVDI  +DIR+D  R+SG+GGQHVN T SA
Sbjct: 187 RVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 246

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L++R+YD  +++  N     RK  IG+GDR
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQNAYDKKRKNAIGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II  L+ A Q + +   
Sbjct: 307 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMSGELDEIIEALIVADQTEKLEQL 359


>gi|126209498|ref|YP_001054723.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           L20]
 gi|126098290|gb|ABN75118.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 333

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 160/333 (48%), Positives = 240/333 (72%), Gaps = 6/333 (1%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              D +   ++EY+ +  +++  + + +   + ++   ++     D +++D+A  E+   
Sbjct: 3   NDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQILL----DDPDMKDMAAEEIAEN 58

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           + EI  LE  +  LLLPKD +D+ +  LEIRAGTGG EA +F GDL+RMY RY   ++W+
Sbjct: 59  KAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWR 118

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
           +E +S+++++ GGYKEI+  ISG GV+ ++KFESG HRVQRVP TE+ GR+HTSA TVAV
Sbjct: 119 IEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAV 178

Query: 207 LPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
           +PE  E ++ +I   D+RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V    E+SQH+
Sbjct: 179 MPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHK 238

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
           N+ +A+ VL +R+  VE++R A E++  R+  +GSGDRS++IRTYN+ QGR+TDHRINLT
Sbjct: 239 NKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRTYNYPQGRVTDHRINLT 298

Query: 325 LYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +Y+L+ V+ G ID++I P++T +QA  + + SE
Sbjct: 299 VYRLDEVMNGKIDELIQPIITEYQADQLAALSE 331


>gi|242371609|ref|ZP_04817183.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
 gi|242350676|gb|EES42277.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
          Length = 358

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 250/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E +D+ 
Sbjct: 3   DQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRSYKSKKEELEDIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E  ++ + E  A++ E+ ++E E+  LL+PKD +D+K  I+EIRA  GG 
Sbjct: 63  EMLRET-SDKEEVEMLKEESTALKNELPDMEEELKILLIPKDPNDEKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA    +K E++ +S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVVATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G++D+II+ L  + Q + +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLDEIIDALTLSEQTEKLKELN 354


>gi|49484342|ref|YP_041566.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82751719|ref|YP_417460.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
 gi|257426257|ref|ZP_05602672.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428915|ref|ZP_05605309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431524|ref|ZP_05607897.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257434233|ref|ZP_05610583.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257437146|ref|ZP_05613186.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282904787|ref|ZP_06312661.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906462|ref|ZP_06314313.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909431|ref|ZP_06317246.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911683|ref|ZP_06319482.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914967|ref|ZP_06322747.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917467|ref|ZP_06325220.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920296|ref|ZP_06328020.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282925507|ref|ZP_06333161.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C101]
 gi|283771286|ref|ZP_06344175.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958898|ref|ZP_06376343.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293509035|ref|ZP_06667822.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510950|ref|ZP_06669649.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293547552|ref|ZP_06672227.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295428705|ref|ZP_06821331.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297589815|ref|ZP_06948455.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|56749405|sp|Q6GEV7|RF1_STAAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361615|sp|Q2YUN5|RF1_STAAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49242471|emb|CAG41187.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82657250|emb|CAI81691.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
 gi|257270962|gb|EEV03135.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274257|gb|EEV05774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257277765|gb|EEV08435.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257280872|gb|EEV11017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283539|gb|EEV13666.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282312908|gb|EFB43309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316156|gb|EFB46537.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318669|gb|EFB49026.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282321170|gb|EFB51501.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282324448|gb|EFB54761.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326701|gb|EFB56999.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330412|gb|EFB59930.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282594820|gb|EFB99797.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C160]
 gi|283459491|gb|EFC06584.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           H19]
 gi|283789616|gb|EFC28439.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919672|gb|EFD96745.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094739|gb|EFE25011.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466235|gb|EFF08762.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M809]
 gi|295127375|gb|EFG57015.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576943|gb|EFH95657.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298695392|gb|ADI98614.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302333764|gb|ADL23957.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|312437464|gb|ADQ76535.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315193283|gb|EFU23681.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|323439333|gb|EGA97057.1| peptide chain release factor 1 [Staphylococcus aureus O11]
 gi|323442458|gb|EGB00087.1| peptide chain release factor 1 [Staphylococcus aureus O46]
          Length = 358

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 246/353 (69%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  D+ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELADIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E  ++ + E   I+ E+  LE E+  LL+PKD +DDK  I+EIRA  GG 
Sbjct: 63  EMLSET-DDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA  + +K E++ +S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G++++II+ L  + Q   +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKELN 354


>gi|197301354|ref|ZP_03166435.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
           29176]
 gi|197299511|gb|EDY34030.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
           29176]
          Length = 356

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 176/355 (49%), Positives = 248/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  R+ E+   + E    +    + +L +E + ++PI+     Y   KQ  ++  
Sbjct: 3   DRLDDLLIRYEEVMGELQEPDVANDPERFRRLMKEQSDLAPIVEAYKEYKNCKQNIEE-S 61

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +  SD E+R+LA+ E+      I ELE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 62  LQLLEEESDEEMRELAKEELSGSRARIEELEQELKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY  YA  R+WK E++S ++N  GG+KE V  ++G+G +SRMK+ESGVH
Sbjct: 122 EAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMVTGQGAYSRMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS  TVAV+PEA E+DV I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++     +A R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQASEAAERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL+KL+ +L G +D+II+ L+ A Q   +    E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLHKLDSILNGDLDEIIDSLIAADQTAKLAKMEE 356


>gi|81428746|ref|YP_395746.1| peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
           23K]
 gi|119361554|sp|Q38WJ4|RF1_LACSS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78610388|emb|CAI55438.1| Peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 365

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 243/355 (68%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+  L +R+AE++  MS+   ++    Y++L++E A +  I+ K +   +   E  +  
Sbjct: 6   EQLDGLLDRYAELQELMSDPEVINETSRYMELSKEEAGLREIVGKYTRLKEVLSEVTENE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +DSE+ +L + ++  ++ E  +LE EI  L+LP D +D+K+ I+EIR   GG 
Sbjct: 66  ELLRET-TDSEMTELVKADLEELQTEKAQLEQEIKILMLPTDPNDEKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF GDL  MY+RYA  + W+ E++  +  + GG+KE+   I+G+ V+S++K+E+G H
Sbjct: 125 EASLFAGDLLNMYQRYAESQNWQTEIIDETATEVGGFKEVAMMITGKNVYSKLKYENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GRVHTS ATVAV+PE   +DV++  +DIR+D  RASG+GGQH+N T SA
Sbjct: 185 RVQRIPKTESQGRVHTSTATVAVMPEYDGVDVELEAKDIRVDVYRASGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V    ++SQ QNR++AMK+L+AR+YD    +  +E  ++RK  +GSGDR
Sbjct: 245 VRMTHIPTGIVVAMQDQRSQQQNRVKAMKILQARVYDYYESQNQSEYDSSRKSAVGSGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G + D+I+ L+   Q + +    +
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGDVIDALILFDQTEKLEQLQD 359


>gi|257126615|ref|YP_003164729.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b]
 gi|257050554|gb|ACV39738.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b]
          Length = 360

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 244/355 (68%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ D+  +  E+   + +   V    K+    +   +I  ++ K + Y  +K+E + L 
Sbjct: 3   QKLDDVVLKHKELTELLMDPEVVSDPKKIMEYNKALNSIDEVVQKYTYYKNRKEEMESLK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +     D+E++++   E+ +IE+EI  LE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  EDLK-TEKDAEMKEMMLEEIHSIEEEIPNLEEELKILLLPKDPNDDKNVIMEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  D+FRM+ RYA   +WK E++  S+   GG KE+   I G G +SR+KFESGVH
Sbjct: 122 EAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGHGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVPATE+SGRVHTS  TVAVLPE  +  +V+I   D++IDT R+SG+GGQHVNTTDS
Sbjct: 182 RVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG++V +   +SQ +NR  AMKVL ++LY++E ++  +   + R+ Q+GSGD
Sbjct: 242 AVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRSAVESERRSQVGSGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSE+IRTYNF QGR+TDHRI LTL++LE VL G +D++I+ L+   QA+++    
Sbjct: 302 RSEKIRTYNFPQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYEQAELLKEVG 356


>gi|167993219|ref|ZP_02574314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205328702|gb|EDZ15466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
          Length = 360

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKCQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 358


>gi|326798862|ref|YP_004316681.1| peptide chain release factor 1 [Sphingobacterium sp. 21]
 gi|326549626|gb|ADZ78011.1| Peptide chain release factor 1 [Sphingobacterium sp. 21]
          Length = 357

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 150/356 (42%), Positives = 232/356 (65%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K R+ E+E  +S   +V+    + KL +EY  +  I+ +  IY       + 
Sbjct: 1   MLEKLEAIKLRWEEVERELSNPDTVNDMKRFAKLNKEYKDLGKIVDEYYIYKNIISNIET 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++  +  D E+R++A+ ++ A+  +  E E ++  +++PKD +D K+ I EIR GTG
Sbjct: 61  NKDILA-NEKDQELREMAKEDLDALLVQKEEKEEKVRLMMIPKDPEDAKNAIFEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY RY   + W+VEV+  ++   GGYKE++  +SG  V+ ++K+ESG
Sbjct: 120 GDEAALFAGDLYRMYTRYFDQKGWRVEVMDVTEGTAGGYKEVILKVSGEDVYGQLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAA+VAVLPEA E+DV+I   DI + T R+ G+GGQ+VN  +
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           + V++TH P+GI+V    E+SQ  NR  AM++LR +LY++E ++   + +A RK  + +G
Sbjct: 240 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRTKLYELEVQKKHGDIAAKRKTMVSTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS +IRTYN+ QGR+T+HRI LT+Y L  ++ G I +II+ L  A  A+ +    
Sbjct: 300 DRSAKIRTYNYPQGRVTEHRIGLTMYNLPAIMDGDIQEIIDALQFAENAEKMKEGG 355


>gi|304311492|ref|YP_003811090.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
 gi|301797225|emb|CBL45445.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
          Length = 362

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  +  R  E+   +SE   +     + KL++EYA + P+++  + Y +   
Sbjct: 1   MKDSLRRKLESIAERHEEVAALLSEGSVISDQNQFRKLSQEYAELEPVVTCFADYRKVLA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ D  SD E+R++   E+   + +  + E ++  L+LPKD +D ++  LEIR
Sbjct: 61  DITLARQLMED--SDPEMREMGAEELRTGQAQRDQFELDLQKLMLPKDPNDGRNVYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA    W+VEV+S  + + GGYKEI++ +SG  V+S++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAESCGWRVEVISEHEGEHGGYKEIISRVSGDSVYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TEA GR+HTSA TVAVLPEA EI D+DI  ED+++DT R++G+GGQH
Sbjct: 179 FESGAHRVQRVPVTEAQGRIHTSACTVAVLPEADEIGDIDIRPEDLKMDTYRSTGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVR+TH+PTG +V    E+SQH+NR +A+ +LRARL    +     + S  R+ 
Sbjct: 239 VNTTDSAVRLTHLPTGTVVECQEERSQHKNRAKALALLRARLLSNAQDAQTRQTSEARRQ 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLY+L  +++G + +++  L+  +QA  + + 
Sbjct: 299 LVGSGDRSERIRTYNFPQGRLTDHRINLTLYRLNEIVEGDLSEVVQSLMNEYQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|299140684|ref|ZP_07033822.1| peptide chain release factor 1 [Prevotella oris C735]
 gi|298577650|gb|EFI49518.1| peptide chain release factor 1 [Prevotella oris C735]
          Length = 370

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 145/360 (40%), Positives = 222/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++RF E+   +++   +     Y+KLT+E+  +  I++    Y       ++  
Sbjct: 9   EKLDGLESRFEEVSTLITDPDVIADQTRYVKLTKEWKDLGDIMNARKRYIACLDSIREAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SDS+++D+A+ E+   E    +LE EI  LL+PKD +D K+  +EIRAGTGG 
Sbjct: 69  DILA-NESDSDMKDMAREELQQNETLQPQLEEEIKLLLIPKDPEDAKNVQMEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+R+  ++ W + V   S+   GGYKEI   ISG  V+  MK+ESGVH
Sbjct: 128 EAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAISGTDVYGTMKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GR+ TSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPVTESNGRMQTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   ++D E ++  ++ +  RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYVDDIANRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  L G I D+I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNFPQGRVTDHRIGYTTHDLQGFLGGNIQDMIDALTVAENAEKLKE 367


>gi|168237830|ref|ZP_02662888.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197289243|gb|EDY28610.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 360

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 249/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL A ++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGACIHAAETAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 358


>gi|160893851|ref|ZP_02074634.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
 gi|156864503|gb|EDO57934.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
          Length = 358

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 175/355 (49%), Positives = 255/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL +R   +  ++++   V   + + KL +E + ++PI+ K   Y   KQ  +D  
Sbjct: 3   DKLEDLVDRLDTLNNQLTDPDIVSDQNKFRKLMKEQSELTPIVEKYKEYKDAKQTIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +  +D E+R++A+ E+   +  + + ENE+  LLLPKD +D K+ I+EIRAG GG 
Sbjct: 63  L-MLEEENDEELREMAKEELNEAKATVEKTENELKILLLPKDPNDSKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY++Y    KWKVE++S ++N  GG+KE V  I+G G +S+MK+ESGVH
Sbjct: 122 EAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GR+HTS  TVAV+PEA E+DV+I   DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPKTESGGRIHTSTVTVAVMPEAEEVDVEINENDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++ + +EKSQ QN+ +A  +LR++LYD+E ++  +  +A+RK QIG+GDR
Sbjct: 242 VRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRKSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF +GR+TDHRI LTLYKLE +L G +++II+ L+ A QA  +   +E
Sbjct: 302 SEKIRTYNFPEGRVTDHRIKLTLYKLEQILNGDLNEIIDSLIAADQAAKLSQVNE 356


>gi|258453172|ref|ZP_05701163.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
 gi|257859118|gb|EEV81975.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
          Length = 358

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 246/353 (69%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  D+ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKGKKEELADIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E  ++ + E   I+ E+  LE E+  LL+PKD +DDK  I+EIRA  GG 
Sbjct: 63  EMLSET-DDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA  + +K E++ +S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G++++II+ L  + Q   +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKELN 354


>gi|225874213|ref|YP_002755672.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC
           51196]
 gi|254790854|sp|C1F2J1|RF1_ACIC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225791643|gb|ACO31733.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC
           51196]
          Length = 358

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 245/355 (69%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ R+ E+   M++   +    K  +   ++  +  ++ K   Y + +    D  
Sbjct: 3   ERLEQIETRYEELGREMADPALIADQQKYQKTAKQHRELEDVVEKFREYREVQNGIADAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+EIR +A+ E+ ++E+ + ++E ++  LLLPKD +D+K+ ++EIRAGTGG 
Sbjct: 63  GMMNEA--DAEIRAMAEEELASLEERLPQIEADLKLLLLPKDPNDEKNVVVEIRAGTGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  ++FRMY RYA  R+WKVEVLS S++  GG KE++A I G  V+S+MK+ESGVH
Sbjct: 121 EASLFAAEVFRMYARYAEQRRWKVEVLSMSESSVGGAKEVIAIIEGDHVYSQMKYESGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSA TVAVLPEA E+DV I  +D+RIDT  +SG GGQ VNTT SA
Sbjct: 181 RVQRVPATETQGRVHTSAITVAVLPEAEEVDVKIEAKDLRIDTFCSSGPGGQSVNTTYSA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PT  +V    EKSQ +NR +AM+VLR+RLY+VE +R     +  RK Q+GSGDR
Sbjct: 241 VRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERQQQALAKERKQQVGSGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF Q R+TDHRI LT+++L  V++G +  +I+ L     A+ + + SE
Sbjct: 301 SEKIRTYNFPQNRLTDHRIGLTIHQLAEVMEGRLQPVIDALTAHFNAERLKAESE 355


>gi|327253901|gb|EGE65530.1| peptide chain release factor 1 [Escherichia coli STEC_7v]
          Length = 360

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + E+ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358


>gi|315649892|ref|ZP_07902974.1| peptide chain release factor 1 [Paenibacillus vortex V453]
 gi|315274691|gb|EFU38073.1| peptide chain release factor 1 [Paenibacillus vortex V453]
          Length = 355

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 240/353 (67%), Gaps = 5/353 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +    +   KL   ++E + + P       Y    +E + 
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             T+ G+   D E+R++ ++E+  +    REL  +I  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKTMQGEKMDD-EMREMVKMEIEELSTRERELAEKIRILLLPKDPNDDKNVIIEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA  + WKVE++  + ND GG+KE++  I+GRG +S+MKFESG
Sbjct: 120 GDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+P TE+ GR+HTS +TVAV+PEA E+D++I  +DIR+DT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPTTESGGRIHTSTSTVAVMPEAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+      KSQ+ N+ +A++VLRAR++D+ R+    + +  RK ++G+G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKDKALQVLRARIFDMMRQEEEAKYAGERKSKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSERIRTYNF Q R+TDHRI LT++KL+ V+ G I++I++ L  A QA+++ 
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTIAEQAELME 352


>gi|303237122|ref|ZP_07323692.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN]
 gi|302482509|gb|EFL45534.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN]
          Length = 370

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 140/360 (38%), Positives = 220/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+ RF E+   +++   +       KLT+EY  +  I+     Y +      +  
Sbjct: 9   EKLDGLEARFLEVSTLITDPDVISDQQRYVKLTKEYKDLGDIMDARKRYIKCLTTISEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + +D E++++A++E+   E+ +  LE EI  LL+PKD +DDK+  +EIRAG GG 
Sbjct: 69  DILT-NETDQEMKEMARLELSENEELLPNLEEEIKLLLVPKDPEDDKNVQMEIRAGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GD+F MY+RY   + W + + S S+   GG+KEI   ++G GV+  +K+ESGVH
Sbjct: 128 EAALFAGDIFNMYKRYCDKKGWNLSITSVSEGTVGGFKEIDFAVAGTGVYGILKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+T+  GR+ TSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPSTDTQGRMQTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  N+ ++ RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVNDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGR+TDHRI  T + L   + G I D+I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNYPQGRVTDHRIGFTTHDLPGFMNGDIQDMIDALTVAENAEKLKE 367


>gi|52842546|ref|YP_096345.1| peptide chain release factor 1 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295177|ref|YP_127592.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|54298226|ref|YP_124595.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|61214584|sp|Q5WUB1|RF1_LEGPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214585|sp|Q5X2V3|RF1_LEGPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214588|sp|Q5ZT29|RF1_LEGPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52629657|gb|AAU28398.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53752011|emb|CAH13437.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|53755009|emb|CAH16497.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|307611181|emb|CBX00825.1| peptide chain release factor 1 [Legionella pneumophila 130b]
          Length = 362

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 167/361 (46%), Positives = 249/361 (68%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +  R+ E+   +SE+  +     +  L++EYA + P+      Y + K 
Sbjct: 1   MKKSLELKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
               L+ ++   + D ++  +A+ E+  ++K+I EL+ ++ + L+PKD DD+++  LE+R
Sbjct: 61  NLDSLNELL--ESDDKDLATMAEEEIDTVKKQIEELDEQLQWHLIPKDPDDERNIYLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W++E++S+S  + GGYKEI+A ISG+ V+S++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVA++PE  E  D+ I  +D+RIDT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    E+SQH+NR +AM +L+ RL D E  +   E++  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQAQTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRSERIRTYNF QGR+TDHRINLT+Y+L  +++G +  +I+PL   + A+++   
Sbjct: 299 LVGTGDRSERIRTYNFPQGRLTDHRINLTIYQLSDIMEGNLSLVIDPLKREYHAELLADL 358

Query: 356 S 356
            
Sbjct: 359 G 359


>gi|85711946|ref|ZP_01043000.1| Protein chain release factor A [Idiomarina baltica OS145]
 gi|85694132|gb|EAQ32076.1| Protein chain release factor A [Idiomarina baltica OS145]
          Length = 362

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 254/362 (70%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R+ E++  + E   +   D +  L++EYA +  ++S  + Y Q + 
Sbjct: 1   MNPSIERKLEGLIERYEEVQALLGEPDIISEQDKFRSLSKEYAQLEEVVSAFNSYRQAQS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +    H +  D   D E+R++A  E+   ++ +  LEN +  LLLPKD +DD++C LEIR
Sbjct: 61  DLTAAHEMADD--DDPEMREMANEEIADAKQRVESLENSLQVLLLPKDPNDDRACYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA    W+V  +S+++ + GGYKE++A +SG GV+ RMK
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEQHGWRVSTVSANEGEHGGYKEVIAQLSGDGVYGRMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E + ++I   D+R+DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAEAIEINPADLRVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITH+P+G++V    E+SQH+NR +AM VL++RL  +E ++ A E ++ R+ 
Sbjct: 239 VNRTDSAIRITHLPSGVVVECQEERSQHKNRAKAMSVLQSRLQRMEDEKRAQEEASTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ Q R+TDHRINLTLY+L+ VL+G +D +++P++T HQA  + + 
Sbjct: 299 LVGSGDRSERIRTYNYPQSRVTDHRINLTLYRLDEVLEGGLDLLLDPIITEHQADQLAAL 358

Query: 356 SE 357
           S+
Sbjct: 359 SQ 360


>gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
 gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
          Length = 358

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 249/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E +D+ 
Sbjct: 3   DQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELEDIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E  D+ + E  +++ E+ E+E E+  LL+PKD +D+K  I+EIRA  GG 
Sbjct: 63  EMLKET-SDKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA    +K E++ +S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G +D+II+ L  + Q + +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQTEKLKELN 354


>gi|323490903|ref|ZP_08096098.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
 gi|323395383|gb|EGA88234.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
          Length = 359

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 157/354 (44%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+  +   +S+   V    KL   ++E + +   +     Y     +  +  
Sbjct: 3   DRLQSVEDRYDRLNELLSDPDIVSDTNKLRDYSKEQSDLQETVETYREYKDLTTQLTEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D   D+++R++ + EV  +E+++  +E  ++ LL+PKD +DDK+ I+EIR   GG 
Sbjct: 63  AMF-DEKMDADMREMVKEEVNELEQQVSVVEERLHKLLIPKDPNDDKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY R+A    WK++V+ S+    GG+KEIV  I+G+G +S+MK+E+G H
Sbjct: 122 EAALFAGDLYRMYTRFAESNGWKIQVMDSNPTGLGGFKEIVFMITGKGAYSKMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA LPE  E++VDI   DIR DT  +SG+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVACLPEVEEVEVDIHENDIRTDTYASSGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PT  +V    EKSQ +N+  AMKVLRAR+Y+  ++    E  A RK  +G+GDR
Sbjct: 242 VRLTHLPTNTVVTCQDEKSQIKNKASAMKVLRARVYEKFQQEAQAEYDAVRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG +D+I++ L+   Q+  + S +
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKMDEIVDALIVEEQSARMESLN 355


>gi|223938118|ref|ZP_03630015.1| peptide chain release factor 1 [bacterium Ellin514]
 gi|223893162|gb|EEF59626.1| peptide chain release factor 1 [bacterium Ellin514]
          Length = 359

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 165/359 (45%), Positives = 244/359 (67%), Gaps = 6/359 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    H  I     RF+E+E  +S+  + +    + +L++EY+ +  +++  S Y +   
Sbjct: 1   MDLRPH--IDKFARRFSEVEASLSDPKAFENAQRFQELSKEYSRLKGLVAGGSAYLKAVA 58

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++  T++    +DSE+  +A+ EV  +E+ +++L  E+   +LP D  D ++ I+EIR
Sbjct: 59  DLEENKTLLAAEPADSEMALMAKEEVTRLEEVVKKLGLEVQAGVLPPDPTDSRNTIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GGSE+ALF  DL+RMY RYA  + WKVE + +S +D GG+KE++  I+G  V+ R+K
Sbjct: 119 AGAGGSESALFAADLYRMYTRYAESQGWKVESIDASPSDLGGFKEVIFGITGSDVYKRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESGVHRVQRVPATEA GR+HTS  TVAVLPEA E+D+DI  ED+ +D  RASG GGQ V
Sbjct: 179 YESGVHRVQRVPATEAQGRIHTSTCTVAVLPEAEEVDIDIRPEDLSVDRCRASGKGGQGV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIP+G++V  + E+SQH+N+ +AM VLR+RL + +      + +A RK Q
Sbjct: 239 NTTDSAVRLHHIPSGLIVYCADERSQHKNKAKAMTVLRSRLLEKKIADENAKYAAQRKEQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +G+G+R+ERIRTYNF Q R+TDHRI +TLY L   ++G ID II PL+T    + + + 
Sbjct: 299 VGTGERNERIRTYNFPQNRVTDHRIEVTLYNLPTFVEGEIDSIIEPLMTNDLNEKLAAL 357


>gi|317121004|ref|YP_004101007.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
 gi|315590984|gb|ADU50280.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
          Length = 381

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 166/345 (48%), Positives = 234/345 (67%), Gaps = 5/345 (1%)

Query: 15  RFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           RF ++E  +++        +   L +E A + P++     + +   + +    ++ +   
Sbjct: 36  RFDQLERELADPAVAADPRRWQPLAQERAELEPLVDAYRRWREAGADLEAARALLRET-D 94

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D++       EV  +E E + LE  +  LLLP+D  D +  I+EIRAGTGG EAALF GD
Sbjct: 95  DADEHAYLTAEVERLEAERQRLERTLRSLLLPRDPRDQRDVIMEIRAGTGGEEAALFAGD 154

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY+RYA  + W+ EV++++++D GG+KE+V  +SGRG FSR+K ESGVHRVQRVP T
Sbjct: 155 LFRMYQRYAERQGWRTEVMAATESDLGGFKEVVFAVSGRGAFSRLKHESGVHRVQRVPVT 214

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           EA+GR+HTS ATVAVLPEA E++V I  +D+ IDT  ASG GGQHVN T+SAVRITH PT
Sbjct: 215 EAAGRIHTSTATVAVLPEAEEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVRITHKPT 274

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           GI+V    E+SQH+NR RAMK+LRARL D   +R   E S  R+ Q+G+G+RSE+IRTYN
Sbjct: 275 GIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEELSQQRRSQVGTGERSEKIRTYN 334

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           F + R+TDHRI LTLY+L+ ++ G +D++++ L    +   +G A
Sbjct: 335 FRENRVTDHRIGLTLYRLQEIMDGDLDELLDALAAHDEQVRLGEA 379


>gi|165977491|ref|YP_001653084.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165877592|gb|ABY70640.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 333

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 159/333 (47%), Positives = 240/333 (72%), Gaps = 6/333 (1%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              D +   ++EY+ +  +++  + + +   + ++   ++     D +++++A  E+   
Sbjct: 3   NDQDKFRAYSKEYSQLEEVVTTFNRWKKLNSDIEEAQILL----DDPDMKEMAAEEIAEN 58

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           + EI  LE  +  LLLPKD +D+ +  LEIRAGTGG EA +F GDL+RMY RY   ++W+
Sbjct: 59  KAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWR 118

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
           +E +S+++++ GGYKEI+  ISG GV+ ++KFESG HRVQRVP TE+ GR+HTSA TVAV
Sbjct: 119 IEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAV 178

Query: 207 LPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
           +PE  E ++ +I   D+RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V    E+SQH+
Sbjct: 179 MPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHK 238

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
           N+ +A+ VL +R+  VE++R A E++  R+  +GSGDRS++IRTYN+ QGR+TDHRINLT
Sbjct: 239 NKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRTYNYPQGRVTDHRINLT 298

Query: 325 LYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +Y+L+ V+ G ID++I P++T +QA  + + SE
Sbjct: 299 VYRLDEVMNGKIDELIQPIITEYQADQLAALSE 331


>gi|160891026|ref|ZP_02072029.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492]
 gi|270294364|ref|ZP_06200566.1| peptide chain release factor 1 [Bacteroides sp. D20]
 gi|317480970|ref|ZP_07940050.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36]
 gi|156859247|gb|EDO52678.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492]
 gi|270275831|gb|EFA21691.1| peptide chain release factor 1 [Bacteroides sp. D20]
 gi|316902863|gb|EFV24737.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36]
          Length = 370

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 147/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  +++    Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLGGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + +D E+R++A+ E+ A +    ELE +I  LL+P D  D ++ ILEIR GTGG 
Sbjct: 69  EIIA-NETDQEMREMAREELDACQTRQPELEEQIKLLLVPADPQDGRNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + W++E+ S+++   GG+KEIV +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYTKYCESKGWRMEISSANEGAAGGFKEIVCSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|24379522|ref|NP_721477.1| peptide chain release factor 1 [Streptococcus mutans UA159]
 gi|32171546|sp|Q8DU64|RF1_STRMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24377463|gb|AAN58783.1|AE014946_8 putative peptide chain release factor 1 [Streptococcus mutans
           UA159]
          Length = 359

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 157/358 (43%), Positives = 232/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++ +LLLPKD +DDK+ ILEIR  
Sbjct: 61  ADAQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + WK EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEELN 358


>gi|260592403|ref|ZP_05857861.1| peptide chain release factor 1 [Prevotella veroralis F0319]
 gi|260535639|gb|EEX18256.1| peptide chain release factor 1 [Prevotella veroralis F0319]
          Length = 370

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 142/360 (39%), Positives = 219/360 (60%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+ R+ E+   +++   +     Y+KLT+EY  +  I+     Y       ++  
Sbjct: 9   QKLDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARKRYITCLTTIKEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + SD+E++++A+ E+   E+    LE EI  LL+PKD +D K+  +EIR G GG 
Sbjct: 69  DIIA-NESDAEMKEMAREELAENEELQPRLEEEIKILLVPKDPEDAKNVQMEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+RY   + WK+ + S S+   GG+KEI   + G  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKRYCDKKGWKLSITSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYIDDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  + G I ++I+ L  A  A+ +  
Sbjct: 308 TLVSTGDRSAKIRTYNFPQGRVTDHRIGFTTHDLQGFMNGEIQEMIDALTVAENAEKLKE 367


>gi|220963008|gb|ACL94364.1| bacterial peptide chain Release factor 1 (RF-1) [Caulobacter
           crescentus NA1000]
          Length = 335

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 189/336 (56%), Positives = 254/336 (75%), Gaps = 5/336 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M  +      +KL++E+A + P+   +    +   E  +L  +     SD E+ ++ + E
Sbjct: 1   MGAATDGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVMA----SDPEMAEMVRDE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           + A+++++  +E E+  +L PKD D++ S ILE+RAGTGG EAALF GDLFRMY+RYA  
Sbjct: 57  IQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQT 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + W+VE+ S S+ + GG+KEIVA+I+G GVF R+KFESGVHRVQRVPATEA GR+HTSAA
Sbjct: 117 QGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVPATEAQGRIHTSAA 176

Query: 203 TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQ 262
           TVAVLPEA +++++I   D+RIDT R+SG+GGQHVN TDSAVRITH+PTG++VTSSEKSQ
Sbjct: 177 TVAVLPEAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVTSSEKSQ 236

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           HQNR RAMK L+ARLYD++R+ + + RS  RK Q+GSGDRSERIRTYNF QGR+TDHRIN
Sbjct: 237 HQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSERIRTYNFPQGRVTDHRIN 296

Query: 323 LTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           LTLY L  +++G  +DD+INPL+   QA+ + S  E
Sbjct: 297 LTLYNLARIMEGDALDDVINPLIAEDQAERLASLEE 332


>gi|325679581|ref|ZP_08159156.1| peptide chain release factor 1 [Ruminococcus albus 8]
 gi|324108611|gb|EGC02852.1| peptide chain release factor 1 [Ruminococcus albus 8]
          Length = 359

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 168/356 (47%), Positives = 250/356 (70%), Gaps = 5/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L+++F EI  R+ +   V+    Y +L  EY  + PI+ K+  YD+ K E  +  
Sbjct: 3   DKLRALEDKFNEINERLMQPEVVNDSKLYTELMIEYRDLQPIVEKLKEYDKAKAEFDEAV 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D +++++ Q +    +  + +LE+++  LLLPKD +DD++ I+EIR G GG 
Sbjct: 63  EMMNDGGLDKDMKEMVQEQYDESKTAMAQLEDDLKILLLPKDPNDDRNVIIEIRGGAGGE 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L+RMY  YAA + W+++V+S+++ + GGYKEI  T+SG+G +SR+K+ESGVH
Sbjct: 123 EAALFANSLYRMYTMYAAQKGWQIDVMSANETELGGYKEITFTVSGQGAYSRLKYESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TE+ GRVHTS  TVAVLPEA E+++D     DI+++  R+SG+GGQH+N T S
Sbjct: 183 RVQRVPETESQGRVHTSTVTVAVLPEAEEVELDLNEERDIKMEVFRSSGAGGQHINKTSS 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+ HIPTG +V   +E+SQ QNR +A+K+LRA+L D + +   NE ++NR+ Q+G+GD
Sbjct: 243 AVRLIHIPTGTVVECQNERSQFQNRDKALKMLRAKLLDEKVRAQENEIASNRRSQVGTGD 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSE+IRTYNF + RI+DHRI LTLYKLE +L G +D++I+ L TA QA  + +  E
Sbjct: 303 RSEKIRTYNFPESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQAAKLAAQQE 358


>gi|148359876|ref|YP_001251083.1| peptide chain release factor 1 [Legionella pneumophila str. Corby]
 gi|296107926|ref|YP_003619627.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
 gi|166223567|sp|A5IED7|RF1_LEGPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148281649|gb|ABQ55737.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila str.
           Corby]
 gi|295649828|gb|ADG25675.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
          Length = 362

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 167/361 (46%), Positives = 249/361 (68%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +  R+ E+   +SE+  +     +  L++EYA + P+      Y + K 
Sbjct: 1   MKKSLELKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
               L+ ++   + D ++  +A+ E+  ++K+I EL+ ++ + L+PKD DD+++  LE+R
Sbjct: 61  NLDSLNELL--ESDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + W++E++S+S  + GGYKEI+A ISG+ V+S++K
Sbjct: 119 AGTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVA++PE  E  D+ I  +D+RIDT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    E+SQH+NR +AM +L+ RL D E  +   E++  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQAQTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRSERIRTYNF QGR+TDHRINLT+Y+L  +++G +  +I+PL   + A+++   
Sbjct: 299 LVGTGDRSERIRTYNFPQGRLTDHRINLTIYQLSDIMEGNLSLVIDPLKREYHAELLADL 358

Query: 356 S 356
            
Sbjct: 359 G 359


>gi|220932633|ref|YP_002509541.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
 gi|219993943|gb|ACL70546.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
          Length = 358

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 177/359 (49%), Positives = 249/359 (69%), Gaps = 6/359 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M  L+ K++  L +R+ E+   +S+   ++    Y KL +E+  +  I+SK   Y +   
Sbjct: 1   MFDLT-KKLDKLVDRYNELNKEISDPDVINNSEQYQKLLKEHGKLKEIVSKYREYKKVLS 59

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++ H+ I +   + E+R+LA++E+  +     ++E+E+ Y+LLP+D +D+K+ I+EIR
Sbjct: 60  RVEEAHS-IIEEEEEQEVRELAEMELKELTPRKEKMEDELTYMLLPEDPNDEKNVIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA LF  DL+RMY RYA  + WK EV+S++ +  GGYKEI+ T+ G+ V+SR+K
Sbjct: 119 AGAGGDEAGLFAADLYRMYSRYAESKNWKTEVISANASGIGGYKEIIFTVEGKNVYSRLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESGVHRVQRVP TE+ GR+HTS ATVAVLPEA E+DVDI   D+RID  R+SG GGQ V
Sbjct: 179 YESGVHRVQRVPTTESGGRIHTSTATVAVLPEAEEVDVDIDPNDLRIDVYRSSGPGGQSV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH PTG++V    EKSQH+N+ RAM++LRARL ++  K    E    RK Q
Sbjct: 239 NTTDSAVRITHEPTGLVVSCQDEKSQHKNKARAMRILRARLKELMEKEKQAEIDEARKSQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           IGSGDRSE+IRTYNF QGR++DHRINLT+++L  +L G +D II+ L+     K +   
Sbjct: 299 IGSGDRSEKIRTYNFPQGRVSDHRINLTIHQLNDILDGNLDLIIDNLIKEDTIKRLEKL 357


>gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909]
          Length = 358

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 250/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E QD+ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQDIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E  ++ + E  A++ E+ ++E E+  LL+PKD +DDK  I+EIRA  GG 
Sbjct: 63  DMLSET-SDKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA    +K E++ +S++D GGYKE+  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G++D+I+  L  + Q + +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGHLDEIVEALTLSEQTEKLKELN 354


>gi|283471335|emb|CAQ50546.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 358

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 167/352 (47%), Positives = 246/352 (69%), Gaps = 4/352 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  D+  
Sbjct: 4   QLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELADIEE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E  ++ + E   I+ E+  LE E+  LL+PKD +DDK  I+EIRA  GG E
Sbjct: 64  MLSET-DDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDL RMY +YA  + +K E++ +S++D GGYKEI  ++SG G +S++KFE+G HR
Sbjct: 123 AAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSAV
Sbjct: 183 VQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSAV 242

Query: 245 RITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           RITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRSE
Sbjct: 243 RITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTGDRSE 302

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RIRTYN+ Q R+TDHRI LTL KL  +++G++++II+ L  + Q   +   +
Sbjct: 303 RIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKELN 354


>gi|127513840|ref|YP_001095037.1| peptide chain release factor 1 [Shewanella loihica PV-4]
 gi|166223603|sp|A3QH30|RF1_SHELP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126639135|gb|ABO24778.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           loihica PV-4]
          Length = 361

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 160/362 (44%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S++  +     +  L++EY+ +  ++     Y Q ++
Sbjct: 1   MKDSVIRKLEGLLERNEEVLALLSDAEIIADQERFRALSKEYSQLEDVVKSFKAYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ +   D++++++AQ E+   +  +  LE E+  LLLPKD  DD +  LEIR
Sbjct: 61  DLASAQEMLAE--DDADLKEMAQEEIKEAKATLDVLEGELQILLLPKDPKDDNNAFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RY    +W++E++++++ + GG+KEI+  +SG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYCEANRWQMEIMNANEGEHGGFKEIIVKVSGDGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV V+PE  E + ++I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVVVMPEIPEAEAIEINPADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIP+GI+V    ++SQH+NR +AM VL AR+  VE ++  +E  + R+ 
Sbjct: 239 VNKTDSAIRITHIPSGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSEEESTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  +QA ++ + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLSEVMEGDLDAILGPLMQENQADLLAAL 358

Query: 356 SE 357
           SE
Sbjct: 359 SE 360


>gi|83310717|ref|YP_420981.1| protein chain release factor A [Magnetospirillum magneticum AMB-1]
 gi|119361556|sp|Q2W6V3|RF1_MAGMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82945558|dbj|BAE50422.1| Protein chain release factor A [Magnetospirillum magneticum AMB-1]
          Length = 354

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 174/358 (48%), Positives = 249/358 (69%), Gaps = 8/358 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAY--IKLTEEYAAISPIISKISIYDQKKQEEQ 60
                Q   +  R  E+  ++S    +D+    +L++E + + P+++ +  + + +++  
Sbjct: 1   MNLETQFDKVLYRHDEVRAQLSSGEGMDSQTIQRLSKELSELDPVVTAVQAFRKAREDMV 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++    +D +++DLA+ E  A+++ +  LE E+  +LLPKD  D+K+ I+E+RAGT
Sbjct: 61  QAAEMM----NDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LFRMYERYA L  W+ EV+  +D   GG KE  ATI+GR VF+R+KFES
Sbjct: 117 GGEEAALFAAELFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFES 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE+ GR+HTSAATVA++PEA E+D+ +   D+R D  R+ GSGGQ VNTT
Sbjct: 177 GVHRVQRVPATESQGRIHTSAATVAIMPEAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTT 236

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+THIPTG+ +    EKSQH+N+  A+K+LRARLY+ ER     ER+A RK Q+GS
Sbjct: 237 DSAVRVTHIPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRIN+TLYK++ V+ G  +D+++  L+ A QA+ +    
Sbjct: 297 GDRSERIRTYNFPQGRVTDHRINMTLYKIDAVMSGDALDELVEALVAADQAERLAEME 354


>gi|86134218|ref|ZP_01052800.1| peptide chain release factor 1 [Polaribacter sp. MED152]
 gi|85821081|gb|EAQ42228.1| peptide chain release factor 1 [Polaribacter sp. MED152]
          Length = 358

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 156/357 (43%), Positives = 228/357 (63%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K R+ E+   + +   +     Y +L +EY  +  ++ K   Y       ++
Sbjct: 1   MVDKLRIVKQRYDEVSDLIIQPEIIMDQKRYAQLMKEYKDLGDVVKKGDEYQTLMNNIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+E+ ++A++++      I ELE EI +LL+PKD +D K+ ++E+RAGTG
Sbjct: 61  AKEIIAD-GSDAEMTEMAKMQMEEANTRIPELEEEIKFLLIPKDPEDAKNAVVELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y   + WKV  +  S+  +GG+KEI   ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYTKYCESKGWKVSTVDYSEGTNGGFKEIQFEVNGDDVYGILKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAAT  V PEA E DV+I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATCMVFPEAEEFDVEINPKDVRIDFFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++     +KSQH+N+ +A KVLR+RLYD+E  +   E +  R   + SG
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKQAEDALKRGSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN++QGR+TDHRI L+LY L  ++ G I  II+ L+ A   + +    +
Sbjct: 300 DRSAKIRTYNYAQGRVTDHRIGLSLYDLPNIMNGDIQKIIDELMLAENTEKLKELGD 356


>gi|15606216|ref|NP_213594.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
 gi|6225940|sp|O67032|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
          Length = 362

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 247/350 (70%), Gaps = 6/350 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ +++  +S+   +     Y KL++E   +  I      Y + ++E ++   
Sbjct: 9   RLDKLQEKYRKLQEELSKPEVIQDVEKYKKLSKELKELQEINELYERYKKAQKELKEAKE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++   +SD ++R+LA+ EV  + +E+++LE E+   L+PKD +D K+ ILEIRAG GG E
Sbjct: 69  LLK--SSDKDLRELAEEEVNRLTEEMKKLEEELKVHLVPKDPNDTKNVILEIRAGAGGEE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY++YA  + WKV +LSS+    GGYKE++A I G G +SR+K+ESGVHR
Sbjct: 127 AALFAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYKEVIALIEGEGAYSRLKYESGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+SGR+HTS ATVAVLPE  E D+ I  E+++I+T RASG+GGQ+VNTT++AV
Sbjct: 187 VQRVPVTESSGRIHTSTATVAVLPEVDETDIKIKPEELKIETFRASGAGGQYVNTTETAV 246

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQ QN+ +A+K+L A+L D   ++   E +  RK Q+G+G+RS
Sbjct: 247 RITHIPTGIVVQCQDERSQFQNKQKALKILYAKLKDYYERKKQEEIAKERKEQVGTGERS 306

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           E+IRTYNF Q R+TDHRINLTLYKL+ VL+G +D+II+ L      K + 
Sbjct: 307 EKIRTYNFPQNRVTDHRINLTLYKLQDVLEGKLDEIIDALRAKEIEKKLE 356


>gi|261409698|ref|YP_003245939.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10]
 gi|261286161|gb|ACX68132.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10]
          Length = 355

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 239/353 (67%), Gaps = 5/353 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +    +   KL   ++E + + P       Y    +E + 
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             T+ G+   D E+R++ ++E+  + +  +EL   I  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKTMQGEKMDD-EMREMVKMEIEELTQREQELAERIRILLLPKDPNDDKNVIIEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA  + WKVE++  + ND GG+KE++  I+GRG +S+MKFESG
Sbjct: 120 GDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+P TE+ GR+HTS +TVAV+PEA E+D++I  +DIR+DT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPTTESGGRIHTSTSTVAVMPEAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+      KSQ+ N+ +A++VLRAR++D+ R+    + +  RK ++G+G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIFDMMRQEEEAKYAGERKSKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSERIRTYNF Q R+TDHRI LT++KL+ V+ G I++I++ L  A QA+ + 
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTLAEQAEAME 352


>gi|67459154|ref|YP_246778.1| peptide chain release factor 1 [Rickettsia felis URRWXCal2]
 gi|75536414|sp|Q4ULG0|RF1_RICFE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67004687|gb|AAY61613.1| Peptide chain release factor RF-1 [Rickettsia felis URRWXCal2]
          Length = 355

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 176/354 (49%), Positives = 250/354 (70%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 1   MSFSDNLAKILDKYENLGKKLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ +R+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ +  L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIADDEAKKLSE 354


>gi|292488088|ref|YP_003530965.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
 gi|292899299|ref|YP_003538668.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           49946]
 gi|291199147|emb|CBJ46261.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           49946]
 gi|291553512|emb|CBA20557.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
 gi|312172219|emb|CBX80476.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 360

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+E  + ++  +     +  L+ EYA ++ +      + Q +++      
Sbjct: 8   KLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQCQEDIAAAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++G    D+E+R++AQ E+ A      +LE ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  MLG----DAEMREMAQDELQAARATCEDLEQQLQVLLLPKDPDDERNCYLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+WKVEV+S+++ + GGYKE++A + G G + R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  DI   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL +R+   E  R   E S+ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLT+Y+L+  ++G +D +I P++  +QA  + + +
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTIYRLDEAMEGKLDALIEPIVQEYQADQLAALA 357


>gi|289550267|ref|YP_003471171.1| Peptide chain release factor 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315660273|ref|ZP_07913128.1| peptide chain release factor RF1 [Staphylococcus lugdunensis
           M23590]
 gi|289179799|gb|ADC87044.1| Peptide chain release factor 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315494700|gb|EFU83040.1| peptide chain release factor RF1 [Staphylococcus lugdunensis
           M23590]
          Length = 358

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 245/353 (69%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  D+ 
Sbjct: 3   DQLDIVEERYEQLNEMLSDPDVVNNADKLRKYSKEQAELQKTVDVYREYKNKKEELSDIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E  ++ + E   ++  +  LE ++ +LL+PKD +DDK  I+EIRA  GG 
Sbjct: 63  DMLSET-DDKEEIEMLKEESSNLKDALPLLEEKLKFLLIPKDPNDDKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA    ++ EV+ ++++D GGYKE+   +SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYTKYAEANGFRTEVVEATESDHGGYKEVSFQVSGAGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITHIPTG++ TSSEKSQ QNR +A+KVL+ARLYD++ +    + +A RK  +G+GDRS
Sbjct: 242 VRITHIPTGVIATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ER+RTYN+ Q R+TDHRI LTL KL+ +++G +D+II+ L  + Q + +   +
Sbjct: 302 ERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKELN 354


>gi|157145532|ref|YP_001452851.1| peptide chain release factor 1 [Citrobacter koseri ATCC BAA-895]
 gi|166223546|sp|A8AG02|RF1_CITK8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157082737|gb|ABV12415.1| hypothetical protein CKO_01275 [Citrobacter koseri ATCC BAA-895]
          Length = 360

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKGEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIVQEHQADQLAALSE 358


>gi|116625721|ref|YP_827877.1| peptide chain release factor 1 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122252101|sp|Q01RX8|RF1_SOLUE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116228883|gb|ABJ87592.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 362

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 166/359 (46%), Positives = 248/359 (69%), Gaps = 6/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
               +++  L+ RF E+  +M++   +     Y K+ +  + +S I +K   + + +   
Sbjct: 1   MQFAQKLDQLEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWKKVEDGL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                ++ +   D+E++++A++E+  +E E   +E E+  LLLPKD +DDK+ +LEIRAG
Sbjct: 61  AQARPMLQEQ--DAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA LF  ++FRMY RYA  + WK+EV SSS++  GG KE++A +SG  V++++K+E
Sbjct: 119 TGGDEATLFAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE  GRVHTSA TVAVLPEA E++V +  +DIRIDT  +SG GGQ VNT
Sbjct: 179 SGVHRVQRVPVTEQQGRVHTSAITVAVLPEADEVEVKLEAKDIRIDTFCSSGPGGQSVNT 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVRITH+PTG++V    EKSQ +NR +A +VLR+RLY++E ++      A R+  +G
Sbjct: 239 TYSAVRITHLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQAALGAERRTMVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSE+IRTYNF Q R++DHRI LTL++L++V++G +D I++ L   +QA+ +   +E
Sbjct: 299 SGDRSEKIRTYNFPQNRVSDHRIGLTLHQLDFVMEGKMDAIVDALTEFYQAQKLKQQAE 357


>gi|206580278|ref|YP_002237908.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
 gi|288934821|ref|YP_003438880.1| peptide chain release factor 1 [Klebsiella variicola At-22]
 gi|290508964|ref|ZP_06548335.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
 gi|238058716|sp|B5XW51|RF1_KLEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206569336|gb|ACI11112.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
 gi|288889530|gb|ADC57848.1| peptide chain release factor 1 [Klebsiella variicola At-22]
 gi|289778358|gb|EFD86355.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
          Length = 360

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 169/362 (46%), Positives = 252/362 (69%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + ++ ++   D +  L+ EYA +S +    + + Q ++
Sbjct: 1   MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  +E+R
Sbjct: 61  DIETAQMML----DDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA  R+W+VE+LS+++ + GG+KE++A  SG GV+ R+K
Sbjct: 117 AGTGGDEAALFAGDLFRMYSRYAESRRWQVEILSANEGEHGGFKEVIAKFSGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+PE  E ++ DI   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +     ++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEYQADQLAAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|307565625|ref|ZP_07628103.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A]
 gi|307345657|gb|EFN91016.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A]
          Length = 370

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 140/360 (38%), Positives = 219/360 (60%), Gaps = 13/360 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ RF E+   +++   ++    Y+KLT EY  +  I+     Y       ++   
Sbjct: 10  KLDGLEARFEEVSTLITDPNVINDQARYVKLTREYKDLGDIMEARKRYIACLTTIKEAKD 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ + N D +++++A+ E+   E    +LE EI  LL+PKD++D K+  +E+RAGTGG E
Sbjct: 70  ILANEN-DPDMKEMAREELSDNEILQPKLEEEIKLLLVPKDSEDAKNVQMEVRAGTGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GD+F MY+R+   + W + V   ++   GG+KEI   ISG GV+  +K+ESGVHR
Sbjct: 129 AALFAGDIFNMYKRFCDKKGWTLSVTDINEGAVGGFKEIDFAISGEGVYGILKYESGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP+T+  GR+ TSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S V
Sbjct: 189 VQRVPSTDTQGRMQTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  N+ +  RK 
Sbjct: 249 RLRYPWKNPNTGEIEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYINDIANRRKS 308

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS +IRTYN+ QGR+TDHRI  T + L   + G I ++I+ L  A  A+ +  A
Sbjct: 309 LVSTGDRSAKIRTYNYPQGRVTDHRIGFTSHDLPGFMNGNIQEMIDALTVAENAEKMKEA 368


>gi|123442667|ref|YP_001006644.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161451|ref|YP_004298028.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166223618|sp|A1JRU0|RF1_YERE8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122089628|emb|CAL12478.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605428|emb|CBY26926.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665681|gb|ADZ42325.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 360

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIEAAEMML----DDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A +SG GVF ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185]
 gi|166223602|sp|A6WSF0|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185]
          Length = 363

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +   D +  L++EYA +  +++    Y Q + 
Sbjct: 1   MKESVIRKLEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+E+R++AQ E+ A + ++  LE+E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLDSAKEML--EEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++E++S ++ + GG+KE++  +SG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGEGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VL E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA  + + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILLPLMQEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|256545370|ref|ZP_05472733.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
 gi|256398931|gb|EEU12545.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
          Length = 357

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 162/357 (45%), Positives = 234/357 (65%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + +  ++  F E+E ++++   +     + K++ EY  + PI+ K +     +    +
Sbjct: 1   MLENLEHMRENFKELEKKLADPEVLSDTERFKKVSREYNQLKPIVEKYNQIRSAEDMINE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D E+ DL + E+   +K + +   ++  LL+P D +D K  I+EIRAG G
Sbjct: 61  NTELLKEA-DDKEMIDLLKSEIDENKKNLEKYNEDLKVLLIPTDPNDHKDVIVEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF G+L+RMY  YA  +K+K E +  S    GG KE    + G G +S++K+ESG
Sbjct: 120 GEEAGLFAGNLYRMYHMYADKQKYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPEA E+D+ I   DIR D  R+SG+GGQ VNTTD
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVLPEADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++V    EKSQ +N+ +AM+VLRARLY++E ++   E S NRK Q+G+G
Sbjct: 240 SAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEIEEQKRQKEISDNRKSQVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYN+ QGRITDHRIN T+Y+L+  L G I+++I  L+T  Q + + +  E
Sbjct: 300 DRSERIRTYNYPQGRITDHRINKTIYQLDDFLDGNIEEMIESLITEDQTRKLKTMGE 356


>gi|258422882|ref|ZP_05685782.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
 gi|257846906|gb|EEV70920.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
          Length = 358

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 246/353 (69%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  D+ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELADIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E  ++ + E   I+ E+  +E E+  LL+PKD +DDK  I+EIRA  GG 
Sbjct: 63  EMLSET-DDKEEVEMLKEESSGIKAELPNIEEELKILLIPKDPNDDKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA  + +K E++ +S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G++++II+ L  + Q   +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKELN 354


>gi|16760669|ref|NP_456286.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16765117|ref|NP_460732.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29141572|ref|NP_804914.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62180340|ref|YP_216757.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161613728|ref|YP_001587693.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168241358|ref|ZP_02666290.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168259999|ref|ZP_02681972.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168462748|ref|ZP_02696679.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168820514|ref|ZP_02832514.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443280|ref|YP_002041026.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448370|ref|YP_002045819.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471193|ref|ZP_03077177.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197250213|ref|YP_002146253.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|198242115|ref|YP_002215369.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200389390|ref|ZP_03216001.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207856717|ref|YP_002243368.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213051786|ref|ZP_03344664.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213426495|ref|ZP_03359245.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213617488|ref|ZP_03372314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213648795|ref|ZP_03378848.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|238913676|ref|ZP_04657513.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289827376|ref|ZP_06545996.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|61230201|sp|P0A287|RF1_SALTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61230203|sp|P0A288|RF1_SALTI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|75482992|sp|Q57NN5|RF1_SALCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039989|sp|A9MW04|RF1_SALPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690045|sp|B5F4H6|RF1_SALA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690378|sp|B5FU19|RF1_SALDC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690453|sp|B5R3J9|RF1_SALEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690683|sp|B4TKA4|RF1_SALHS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238693511|sp|B4SUG2|RF1_SALNS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25299687|pir||AB0720 peptide chain release factor 1 (RF-1) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154104|gb|AAA88611.1| release factor 1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16420306|gb|AAL20691.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16502965|emb|CAD02131.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137199|gb|AAO68763.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62127973|gb|AAX65676.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161363092|gb|ABX66860.1| hypothetical protein SPAB_01453 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401943|gb|ACF62165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406674|gb|ACF66893.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457557|gb|EDX46396.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|195633960|gb|EDX52312.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197213916|gb|ACH51313.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197936631|gb|ACH73964.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199601835|gb|EDZ00381.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205339285|gb|EDZ26049.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342722|gb|EDZ29486.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205351018|gb|EDZ37649.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206708520|emb|CAR32841.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246962|emb|CBG24779.1| RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993724|gb|ACY88609.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158300|emb|CBW17799.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912765|dbj|BAJ36739.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320085723|emb|CBY95501.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224404|gb|EFX49467.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322714814|gb|EFZ06385.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323130046|gb|ADX17476.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326623115|gb|EGE29460.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988663|gb|AEF07646.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 360

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 358


>gi|329929018|ref|ZP_08282820.1| peptide chain release factor 1 [Paenibacillus sp. HGF5]
 gi|328937007|gb|EGG33436.1| peptide chain release factor 1 [Paenibacillus sp. HGF5]
          Length = 355

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 240/353 (67%), Gaps = 5/353 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +    +   KL   ++E + + P       Y    +E + 
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             T+ G+   D E+R++ ++E+  + +  +EL   I  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKTMQGEKMDD-EMREMVKMEIEELTQREQELAERIRILLLPKDPNDDKNVIIEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA  + WKVE++  + ND GG+KE++  I+GRG +S+MKFESG
Sbjct: 120 GDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+P TE+ GR+HTS +TVAV+PEA E+D++I  +DIR+DT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPTTESGGRIHTSTSTVAVMPEAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+      KSQ+ N+ +A++VLRAR++D+ R+    + +  RK ++G+G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIFDMMRQEEEAKYAGERKSKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSERIRTYNF Q R+TDHRI LT++KL+ V+ G I++I++ L  A QA+M+ 
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTLAEQAEMME 352


>gi|167745421|ref|ZP_02417548.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662]
 gi|167655142|gb|EDR99271.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662]
          Length = 357

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 166/355 (46%), Positives = 248/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L  R   +  ++++       + +  L +E + ++PI+ K   Y Q+KQ  ++  
Sbjct: 3   DKLESLVERMDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEESL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +  SD E+++LA+ E+   +  +  LE E+  LL+PKD +DDK+ I+EIRAG GG 
Sbjct: 63  E-LLEEESDEEMKELAKEELSESKANVERLEEELKILLIPKDPNDDKNIIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  D+ RMY  YA  R+WKVE LS +++  GG+KE+V  ISG+G +SR K+ESGVH
Sbjct: 122 EAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE+ GR+HTS  TVA++PE  +++V++ L D + D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPATESGGRIHTSTITVAIMPEVEDVEVEVDLNDCKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    EKSQ +N+ +A+KVLR+RLY++E+++  +  +  RK Q+G+GDR
Sbjct: 242 VRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDAEAEKRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+ QGR+TDHRI LTL+KL+ V+ G +D++I+ L  A QA  + +  E
Sbjct: 302 SEKIRTYNYPQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTAADQAAKLSNMEE 356


>gi|204927641|ref|ZP_03218842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204322983|gb|EDZ08179.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 360

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTNWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 358


>gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334]
 gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23]
 gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang]
 gi|122263928|sp|Q03A29|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238693030|sp|B3WDK7|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei ATCC 334]
 gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23]
 gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang]
 gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei LC2W]
 gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei BD-II]
          Length = 359

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 240/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+  L +R+ E++  MS+   +     Y+ L++E   +  +++    Y Q   + ++  
Sbjct: 6   EQLDGLLDRYEELQELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V+ +   D ++  LA+ ++  ++K+  +LE++I  L+LPKD +DDK+ I+EIR   GG 
Sbjct: 66  EVLRESKDD-DMEALAKEDLEDLQKQKADLEDQIKVLMLPKDPNDDKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF GDL  MY  YA  + WK E++ ++  + GGYKE+V  I+G  V+S++K+E+G H
Sbjct: 125 EASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  E+D+ I  +DIR D  R+SG+GGQHVN T SA
Sbjct: 185 RVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIP+GI+V+   E+SQ +NR RAM++LR+R+YD    +   +   NRK  IG+GDR
Sbjct: 245 VRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQEKYDQNRKNAIGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II+ L+   QA+ + S +
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESLN 358


>gi|160935042|ref|ZP_02082428.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
 gi|156866495|gb|EDO59867.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
          Length = 358

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 246/355 (69%), Gaps = 4/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++   + ++ E   ++ +   V     Y  L +E   + P++ K   Y ++K  E++  
Sbjct: 3   DRLEVFEKKYEECNQKLYDPAVVSDPEAYAALMKEVKGLEPVVEKYKEYKKQKNNEEEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   + + R++ ++E+    + + ++  E+  LLLPKD +DD++ I+EIR G GG 
Sbjct: 63  QLLAEGGLEKDFREMVELELEEARESLEKISEELKILLLPKDPNDDRNVIVEIRGGAGGE 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   LFRMY  YA  ++WK E+L++++ + GGYKEI   I+G G +SRMK+ESGVH
Sbjct: 123 EAALFSASLFRMYSMYAETKRWKTEILNANETELGGYKEISFMITGEGAYSRMKYESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTS  TVAVLPEA +++V+I   D++IDT R+ G+GGQH+N TDSA
Sbjct: 183 RVQRVPETETQGRIHTSTVTVAVLPEAEDVEVEINPSDLKIDTFRSGGAGGQHINKTDSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTG++V    E+SQ++N+ +AMKVL++RL + ER++  NE +  RK Q+G+GDR
Sbjct: 243 IRITHLPTGLVVECQDERSQYKNKDKAMKVLKSRLLEAEREKQQNEVAQERKSQVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLY+LE V+ G +D++I+ L+TA +A  + S  E
Sbjct: 303 SERIRTYNFPQGRLTDHRIGLTLYRLEDVMNGNLDEVIDALITADRAAKLESTIE 357


>gi|24375323|ref|NP_719366.1| peptide chain release factor 1 [Shewanella oneidensis MR-1]
 gi|32171552|sp|Q8EAR3|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24350136|gb|AAN56810.1|AE015816_7 peptide chain release factor 1 [Shewanella oneidensis MR-1]
          Length = 363

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 161/362 (44%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +   D +  L++EY+ +  +++    Y Q + 
Sbjct: 1   MKESVIRKLEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D+E+R++AQ E+ A + E+  LE E+  LLLPKD +DD +  +EIR
Sbjct: 61  DLESAKEML--EEDDAEMREMAQEEIKAAKVELERLEAELQILLLPKDPNDDTNAFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++E++SS++ + GG+KEI+  +SG G + ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV V+ E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA ++ + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQADLLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|332885310|gb|EGK05561.1| peptide chain release factor 1 [Dysgonomonas mossii DSM 22836]
          Length = 361

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 235/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF EI   +++   +     Y+KL +EY  +  I      Y Q     ++  
Sbjct: 8   ERLDALNIRFEEIGKLITDPAVIADMKRYVKLNKEYRDLEKIDIARREYKQLLATIEEAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ ++  DSE+R++A+ E+ A  + + +LE EI +LL+P D  D K+ I+EIR GTGG 
Sbjct: 68  GIL-ENEDDSELREIAKEEMDAANERMPKLEEEIKFLLVPADPQDSKNAIMEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL+RMY++Y  ++ WK E+ S ++   GG+KEI+ T++G GV+  +K+ESGVH
Sbjct: 127 EAAIFAGDLYRMYQKYCEIKGWKTEITSVTEGTSGGFKEIIFTVTGEGVYGILKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAATVAVLPEA E+DVDI   DI + T R+SG+GGQ+VN  ++ 
Sbjct: 187 RVQRVPATETQGRVHTSAATVAVLPEAEEVDVDINPADIEMQTARSSGAGGQNVNKVETK 246

Query: 244 VRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V++TH P+G ++V    +SQ  NR  AM++LR +LYD+E  +  +  ++ RK  + +GDR
Sbjct: 247 VQLTHKPSGLVVVCQQSRSQLANRELAMQMLRTKLYDIELSKYMDAIASKRKTMVSTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S +IRTYN+ QGR+TDHRINLT+Y L  V+ G I  II+ L+ A   + +  + 
Sbjct: 307 SAKIRTYNYPQGRMTDHRINLTMYNLSAVMDGEIQPIIDQLIIAENTERLKESE 360


>gi|294010049|ref|YP_003543509.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
 gi|292673379|dbj|BAI94897.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
          Length = 363

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 179/357 (50%), Positives = 259/357 (72%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +S ++I  ++ R  E++  M+ +    + +++L++EYA I P+        + +QE   L
Sbjct: 3   ISAERIAQIEARRDEVQASMTRADLAPEEFVRLSKEYAEIEPVAKAAHEVRRLRQELSAL 62

Query: 63  HTVI--GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
             +    D +SD  +R++AQ E+  I+  + + E  +   LLPKD  D +  +LEIRAGT
Sbjct: 63  EYMAGGEDADSDPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAADARPAMLEIRAGT 122

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY+RYA  + WK+E++S++ ++ GGYKE+VA+++G GVF+++KFES
Sbjct: 123 GGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVTGTGVFAKLKFES 182

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSAATVAVLPE  E+DV I   D++ID  RASG+GGQHVNTT
Sbjct: 183 GVHRVQRVPVTESGGRIHTSAATVAVLPEPEEVDVQIADSDLKIDIYRASGAGGQHVNTT 242

Query: 241 DSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+GI+VT  + +SQH+N+ +AM+VLRAR+Y+ ER+R  +E++  RK  +GS
Sbjct: 243 DSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEAERERAQSEQAGARKAMVGS 302

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           GDRSERIRTYNF QGR+TDHRINLTL++L  +L+G  + ++I+ L+   +A  +   
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAEDEAARLAQL 359


>gi|148258772|ref|YP_001243357.1| peptide chain release factor 1 [Bradyrhizobium sp. BTAi1]
 gi|146410945|gb|ABQ39451.1| bacterial peptide chain release factor 1 (bRF-1) [Bradyrhizobium
           sp. BTAi1]
          Length = 361

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 190/349 (54%), Positives = 251/349 (71%), Gaps = 2/349 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E  +    + D Y+++T E A ++P+I  +  Y    +E  
Sbjct: 1   MSSLPEAKLDVLLAHHASLEAELLGQVNSDRYVQITRELAELNPLIEAVKAYRAGVKELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +I D  +D+E+R +A+ E   +     ELE +I   LLPKD  DD++ +LEIRAGT
Sbjct: 61  DTEALIADPATDAEMRAMAEAERDELIARRGELEQKIRVALLPKDAMDDRNVVLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYER+A+L+ WKVEV+S+S+   GGYKEI+A + GRG F+++KFES
Sbjct: 121 GGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  E+DVDI  +D+RI+TMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKQDDLRIETMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITHIPTGI+V     +SQH+NR  AM +LR+R+YD ER+++   RSA RK ++GS
Sbjct: 241 ESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVDAARSAERKEKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T H
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEH 349


>gi|194736546|ref|YP_002114806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238689756|sp|B4TXU2|RF1_SALSV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194712048|gb|ACF91269.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|322616772|gb|EFY13680.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620418|gb|EFY17284.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625680|gb|EFY22499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626130|gb|EFY22940.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633737|gb|EFY30477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322638891|gb|EFY35584.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640874|gb|EFY37523.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644095|gb|EFY40640.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649166|gb|EFY45604.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655325|gb|EFY51633.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660917|gb|EFY57148.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662786|gb|EFY58993.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667970|gb|EFY64129.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674268|gb|EFY70362.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678549|gb|EFY74607.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683208|gb|EFY79224.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686902|gb|EFY82880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195208|gb|EFZ80388.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200201|gb|EFZ85287.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204529|gb|EFZ89533.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207354|gb|EFZ92302.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323213949|gb|EFZ98718.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217339|gb|EGA02058.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219317|gb|EGA03806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323228020|gb|EGA12165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231361|gb|EGA15474.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235801|gb|EGA19880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240370|gb|EGA24413.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245262|gb|EGA29262.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323252824|gb|EGA36660.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323254893|gb|EGA38687.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261018|gb|EGA44613.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266735|gb|EGA50221.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323268942|gb|EGA52398.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 360

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 358


>gi|184153097|ref|YP_001841438.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
 gi|238058717|sp|B2G676|RF1_LACRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183224441|dbj|BAG24958.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
          Length = 360

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 237/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E  ++   + K + Y +  Q   D  
Sbjct: 6   DKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQTISDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D ++  L + E+    +E  +LE E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 66  ELLRETNDD-DLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+ MY RYA  + WKVEV+  ++ + GG+KEI   I+G  V+S++KFE+G H
Sbjct: 125 EASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PEA ++DVDI  +DIR+D  R+SG+GGQHVN T SA
Sbjct: 185 RVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L++R+YD  +++  +     RK  IG+GDR
Sbjct: 245 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQQEQSAYDQKRKDAIGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II  L+ A Q + +   
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQTQKLEQL 357


>gi|218289204|ref|ZP_03493439.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240552|gb|EED07732.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 356

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 230/350 (65%), Gaps = 5/350 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+  +   +          KL    +E A ++  +     + +  Q   +  
Sbjct: 3   DRLASMEERYEHLSQLLCRPDVASDPEKLRSYAKEQAELAETVEVYREWKKVSQNIDEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+R+  + E+  ++     LE+ +  LLLPKD +DDK   +EIRA  GG 
Sbjct: 63  AMLQDKLDD-EMREFVKAELAELQPRREGLEHRLKILLLPKDPNDDKDVFVEIRAAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L RMY+RYA    WK E++ +S  D GG++E+V  + G+G ++++KFESG H
Sbjct: 122 EAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAVHGKGAYAKLKFESGTH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  E++V+I  +D+RIDT  ++G GGQ VNTT SA
Sbjct: 182 RVQRVPITESGGRIHTSTATVAVLPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    EKSQ +N+ +AM+VLRARLY+  ++    E +A R+LQ+G+GDR
Sbjct: 242 VRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLYEKAQREQQEELAAKRRLQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           SERIRTYNF Q R+TDHRI LTL+KL+ VL G +D+II  L+   QA+M+
Sbjct: 302 SERIRTYNFPQSRVTDHRIGLTLHKLDAVLDGELDEIIQALIVESQAEML 351


>gi|56413303|ref|YP_150378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362228|ref|YP_002141865.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81599266|sp|Q5PCQ9|RF1_SALPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690759|sp|B5BI75|RF1_SALPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56127560|gb|AAV77066.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093705|emb|CAR59177.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 360

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDS+
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSS 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 358


>gi|167464538|ref|ZP_02329627.1| peptide chain release factor 1 [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 357

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 153/358 (42%), Positives = 228/358 (63%), Gaps = 5/358 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  L +R+ ++   + +        KL   ++E + +         Y Q   + +
Sbjct: 1   MMLDRLQALADRYEKLSELLCDPDVTSDTKKLREYSKEQSGLQEAYDTYMEYKQVLGQLE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +  +   D E+ +L ++E+  +     ELE  +  L+LPKD +D+K+ I+E+R   
Sbjct: 61  AAKAMQKEKLDD-EMSELVKMEIEELSGRKEELEERLKILMLPKDPNDNKNVIVEVRGAA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DL+RMY RYA  + WK EVL ++ ND GG+KEI   I G G +S++K+ES
Sbjct: 120 GGDEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMIKGNGAYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQR+P TE+ GR+HTS +TVAV+PE  +ID++I   DIR+DT  +SG+GGQ VNTT
Sbjct: 180 GAHRVQRIPVTESGGRIHTSTSTVAVMPEMEDIDIEIKDSDIRVDTFCSSGAGGQSVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
            SAVR+TH+PTGI+      KSQ+ N+ +A++VLRAR+YD  R+    + +  RK ++G+
Sbjct: 240 KSAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYDQVRQEEEAKYAGERKSKVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF Q R+TDHRI LTL+KL+ +L G +++II  L  A QA+ +    +
Sbjct: 300 GDRSERIRTYNFPQSRVTDHRIGLTLHKLDSILGGDLEEIITALTMAAQAEQLEKGEQ 357


>gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195]
 gi|189039990|sp|A9L2D4|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195]
 gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678]
          Length = 363

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +   D +  L++EYA +  +++    Y Q + 
Sbjct: 1   MKESVIRKLEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQV 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+E+R++AQ E+ A + ++  LE+E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLDSAKEML--EEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++E++S ++ + GG+KE++  +SG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VL E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA  + + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILLPLMQEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|307304754|ref|ZP_07584504.1| peptide chain release factor 1 [Shewanella baltica BA175]
 gi|306912156|gb|EFN42580.1| peptide chain release factor 1 [Shewanella baltica BA175]
          Length = 363

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 162/362 (44%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +   D +  L++EYA +  +++    Y Q + 
Sbjct: 1   MKESVIRKLEGLLERNEEVMALLGDASVILDQDRFRALSKEYAQLEDVVAGFKAYQQAQV 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+E+R++AQ E+ A + ++  LE+E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLDSAKEML--EEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++E++S ++ + GG+KE++  +SG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VL E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  +E ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA  + + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILLPLMQEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|227890652|ref|ZP_04008457.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
           11741]
 gi|227867590|gb|EEJ75011.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
           11741]
          Length = 360

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 236/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L++R+ E+   +S+   +     + KL++E A +   + K + Y +  Q+  D  
Sbjct: 6   DRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQISDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+  L + E+   + E  +LE EI  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 66  EMLSDGLDD-EMASLVKEELSNAKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DLF MY +YA  + W +EV+  +  + GG+KEI   I+G  V+S++K+ESG H
Sbjct: 125 EASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE++GRVHTS ATV V+PE  ++++++  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 185 RVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    ++SQ QNR +AMK+L+AR+YD   ++  +E  ANRK  +G+GDR
Sbjct: 245 VRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ Q R+TDHRI L+L KL+ ++ G ++D+I+ L+   Q K +    
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALILFEQTKAMEKLE 358


>gi|317502848|ref|ZP_07960949.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606]
 gi|315666037|gb|EFV05603.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606]
          Length = 370

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 141/360 (39%), Positives = 221/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++RF E+   +++   +     Y+KLT+E+  +  I++    Y       ++  
Sbjct: 9   EKLDGLESRFEEVSTLITDPDVIADQKRYVKLTKEWKDLGDIMNARKRYISCLDSIKEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  +  D++++++A+ E+   E    +LE EI  LL+PKD +D K+  +EIRAGTGG 
Sbjct: 69  NILA-NEDDADMKEMAREELQENESLQPKLEEEIKLLLVPKDPEDAKNVQMEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++Y  ++ W + +   S+   GGYKEI   ISG  V+  MK+ESGVH
Sbjct: 128 EAALFAGDLFNMYKKYCDMKGWILSITDVSEGAVGGYKEIDFAISGTDVYGIMKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GR+ TSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPVTESNGRMQTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   ++D E ++  ++ +  RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYVDDIADRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  L G I D+I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNFPQGRVTDHRIGYTTHDLQGFLNGNIQDMIDALTVAENAEKLKE 367


>gi|295397091|ref|ZP_06807203.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
 gi|294974683|gb|EFG50398.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
          Length = 357

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 230/355 (64%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+     R+AE+   MS+   ++    +  +++E A + P +   S Y    Q  +D  
Sbjct: 4   DQLDSFIARYAEVTELMSDPDVINDNQRFRAISKEEADLRPKVETFSHYKDVIQAIEDTE 63

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + + D E+ +LA+ E+  ++ E   LE EI  L++P D +DDK+ I+EIR   GG 
Sbjct: 64  ELLAESSDD-EMTELAKEELKELKAERESLEEEIKRLMIPSDPNDDKNIIMEIRGAAGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF GDL+ MY RYA  + W+VEV+ SS ND GG+KEI   I G  V+S++KFESG H
Sbjct: 123 EAQLFAGDLYEMYSRYATSQGWRVEVIESSSNDIGGFKEITLQIQGDKVYSKLKFESGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTS ATV V+PE  +ID D+   DIRID  RASG+GGQHVN T SA
Sbjct: 183 RVQRVPDTESQGRVHTSTATVGVMPELEDIDFDLDEGDIRIDIYRASGAGGQHVNKTSSA 242

Query: 244 VRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTG  +    ++SQ QN+ +AM +LR+R+Y+       NE  + RK  +G+GDR
Sbjct: 243 VRLTHEPTGIQVAMQDQRSQQQNKDKAMMILRSRVYEKIASEQQNEYDSQRKNLVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ Q R+TDHRI LT+ KL+ ++ G +D+I++ LL A QA  +   ++
Sbjct: 303 SERIRTYNYPQNRVTDHRIGLTIQKLDRIMTGELDEIVDALLLADQANKLEELND 357


>gi|229545076|ref|ZP_04433801.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
 gi|307287617|ref|ZP_07567660.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
 gi|229309968|gb|EEN75955.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
 gi|306501355|gb|EFM70658.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
 gi|315165014|gb|EFU09031.1| peptide chain release factor 1 [Enterococcus faecalis TX1302]
          Length = 357

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 241/353 (68%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   +     +++L++E A     +     Y Q  +   D  
Sbjct: 3   DQLQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D+E+ ++A+ E+  ++KE   LE+ I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLSE-NLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++YA  + WKVEVL ++    GGYKE++  ISG  VFS++K+ESG H
Sbjct: 122 EAALFAGDLFNMYQKYAEAQGWKVEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++++  +DIR+D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVEIELADKDIRVDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMKVLRAR+YD  ++   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L G +D+II+ L+   Q   +   
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEM 354


>gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1]
 gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32]
 gi|166223604|sp|A4Y3J8|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223606|sp|A1RNE1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           W3-18-1]
 gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           putrefaciens CN-32]
 gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
          Length = 363

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 161/362 (44%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +   D +  L++EY+ +  +++    Y Q + 
Sbjct: 1   MKESVIRKLEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+E+R++AQ E+ A + E+  LE+E+  LLLPKD +DD +  +EIR
Sbjct: 61  DLDSAKEML--EEDDAEMREMAQEEMKAAKAELERLESELQILLLPKDPNDDTNAFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++EV+S ++ + GG+KEI+  +SG G + ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQMEVMSCNEGEHGGFKEIIVKVSGEGAYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV V+ E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA ++ + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILTPLMQEHQADLLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|283832855|ref|ZP_06352596.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
 gi|291071455|gb|EFE09564.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
          Length = 360

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKCEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GG+KE++A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  R     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIVQEYQADQLAALSE 358


>gi|15616337|ref|NP_244642.1| peptide chain release factor 1 [Bacillus halodurans C-125]
 gi|20139353|sp|Q9K6F4|RF1_BACHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|10176399|dbj|BAB07494.1| peptide chain release factor 1 in translation [Bacillus halodurans
           C-125]
          Length = 356

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 234/355 (65%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  R+  +   +S+   +    KL   ++E A +   +     Y     + QD  
Sbjct: 3   ERLQSLDERYERLNELLSDPEVISDSNKLREYSKEQADMEETVQVYREYKTVMDQYQDAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+  + + E+  +     +LE ++  LLLPKD +DDK+ I+E+R   GG 
Sbjct: 63  EMLEDKLDD-EMYAMVKEEIDELATRKEDLEAKLKVLLLPKDPNDDKNVIVEVRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF  DL++MY RYA  + WK+EV+ +S  + GGYKEI+ +++G+G +S++K+E+G H
Sbjct: 122 EAQLFAADLYKMYARYAEAQGWKIEVIEASSTELGGYKEIIFSVNGKGAYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++VDI  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPQTESGGRIHTSTATVAVLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF Q R+TDHRI LTL KLE +LQG +D+II  L+   QA+++    +
Sbjct: 302 SERIRTYNFPQSRVTDHRIGLTLQKLEQILQGKLDEIIESLIVHEQAELMKQQED 356


>gi|260890431|ref|ZP_05901694.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254]
 gi|260860051|gb|EEX74551.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254]
          Length = 360

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 244/355 (68%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ D+  +  E+   + +   V    K+    +   +I  ++ K + Y  +K+E + L 
Sbjct: 3   QKLDDVVLKHKELTEMLMDPEVVSDPKKIMEYNKALNSIDEVVQKYTYYKNRKEEMESLK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +     DSE++++   E+ +IE+EI +LE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  EDLK-AEKDSEMKEMMLEEIHSIEEEIPQLEEELKILLLPKDPNDDKNVIMEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  D+FRM+ RYA   +WK E++  S+   GG KE+   I G G +SR+KFESGVH
Sbjct: 122 EAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGNGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVPATE+SGRVHTS  TVAVLPE  +  +V+I   D++IDT R+SG+GGQHVNTTDS
Sbjct: 182 RVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG++V +   +SQ +NR  AMKVL ++LY++E ++  +     R+ Q+GSGD
Sbjct: 242 AVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRSAVENERRSQVGSGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSE+IRTYNF QGR+TDHRI LTL++LE VL G +D++I+ L+   QA+++    
Sbjct: 302 RSEKIRTYNFPQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYEQAELLKEVG 356


>gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
 gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG]
 gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
 gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
 gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG]
 gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
 gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG]
          Length = 359

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 238/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+  L  R+ E+E  MS+   +     Y+ L++E   +  +++    Y Q   + ++  
Sbjct: 6   EQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V+ + + D ++  LA+ ++  ++K+  +LE +I  L+LPKD +DDK+ I+EIR   GG 
Sbjct: 66  EVLRE-SKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF GDL  MY  YA  + WK E++ S+  + GGYKE+V  I+G  V+S++K+E+G H
Sbjct: 125 EASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  E+D+ I  +DIR D  R+SG+GGQHVN T SA
Sbjct: 185 RVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   E+SQ +NR RAM++LR+R+YD        +   NRK  IG+GDR
Sbjct: 245 VRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II+ L+   QA+ + S +
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESLN 358


>gi|332687009|ref|YP_004456783.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311]
 gi|332371018|dbj|BAK21974.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311]
          Length = 358

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 241/353 (68%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   +     ++KL++E A +   +     Y Q  Q  +D  
Sbjct: 3   DQLQAIEDRYEELGELLSDPEIISDTNRFLKLSKEEANLRETVEVYRRYKQVIQGIKDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+ + +SE+ ++A+ E+  +++E   L + I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLGE-SLESEMLEMAKEELSELKQEKEVLGDRIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G+LF MY++YA L+ WK+EV+ ++    GGYKE++  I+G  VFS++K+ESG H
Sbjct: 122 EAALFAGNLFSMYQKYAELQGWKIEVMDANITGIGGYKEVIMMITGENVFSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++D+  +DIR D   ASG+GGQH+N T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVEIDLEDKDIRTDIYHASGAGGQHINKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMK+LR R+YD  ++   +   A+RK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQLKNREKAMKILRTRVYDQLQQEAQSAYDADRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LTL KL+ VL G +D+II+ L+   Q   +   
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTLQKLDQVLSGKLDEIIDALVLYDQTSKLEEL 354


>gi|157828568|ref|YP_001494810.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933282|ref|YP_001650071.1| peptide chain release factor 1 [Rickettsia rickettsii str. Iowa]
 gi|166223598|sp|A8GSC7|RF1_RICRS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039987|sp|B0BXT9|RF1_RICRO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157801049|gb|ABV76302.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908369|gb|ABY72665.1| bacterial peptide chain release factor 1 (RF-1) [Rickettsia
           rickettsii str. Iowa]
          Length = 355

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 249/354 (70%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 1   MRFSDNLAKILDKYENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++    R+ +R+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQARADSRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRI+LTLYK++ V+  G +D+ +  L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIADDEAKKLLE 354


>gi|85375680|ref|YP_459742.1| peptide chain release factor 1 [Erythrobacter litoralis HTCC2594]
 gi|122543160|sp|Q2N5U6|RF1_ERYLH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84788763|gb|ABC64945.1| protein chain release factor A [Erythrobacter litoralis HTCC2594]
          Length = 355

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 180/357 (50%), Positives = 255/357 (71%), Gaps = 7/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +   ++  + NRFAE+E RM+      + +++ + +YA + P+    +     ++E   L
Sbjct: 3   IPATRLDQIANRFAELEARMASGTLEGEEFVQASRDYAELEPVAKVAAEVKAMREEIGGL 62

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E++ +AQ E+ AI + + E E ++   +LPKD+ D+K  +LEIRAGTGG
Sbjct: 63  EEMLA----DPEMKAMAQEELAAIREALPEKERQLAIAMLPKDSADNKPAMLEIRAGTGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDL+RMYER+A  + WKVE +S + ++ GG+KEIVA +SG GVF+++KFESGV
Sbjct: 119 DEAALFAGDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIVANVSGTGVFAKLKFESGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPE  E+DV I  +D++ID  RASG+GGQHVNTTDS
Sbjct: 179 HRVQRVPETESGGRIHTSAATVAVLPEPDEVDVQIDDKDLKIDIYRASGAGGQHVNTTDS 238

Query: 243 AVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V   + +SQH+N+ +AM+VLR RLYD  R++   E +A RK  +GSGD
Sbjct: 239 AVRITHLPTGIVVQQQDERSQHKNKAKAMQVLRTRLYDHLREQSQGEEAAARKAMVGSGD 298

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGR+TDHRI LTL+KL+ ++ G  + +++  L+   +AK + + SE
Sbjct: 299 RSERIRTYNFPQGRVTDHRIGLTLHKLDEIIAGPGLGELVGALIAEDEAKRLAALSE 355


>gi|161503112|ref|YP_001570224.1| peptide chain release factor 1 [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189039988|sp|A9MPA1|RF1_SALAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160864459|gb|ABX21082.1| hypothetical protein SARI_01177 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 360

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 250/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGEGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 358


>gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155]
 gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223]
 gi|166223601|sp|A3D0G1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790896|sp|B8E815|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           baltica OS155]
 gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223]
          Length = 363

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 162/362 (44%), Positives = 244/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +   D +  L++EYA +  +++    Y Q + 
Sbjct: 1   MKESVIRKLEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQV 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+E+R++AQ E+ A + ++  LE+E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLDSAKEML--EEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++E++S ++ + GG+KE++  +SG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VL E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  +E ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA  + + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILLPLMQEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|29377042|ref|NP_816196.1| peptide chain release factor 1 [Enterococcus faecalis V583]
 gi|227519760|ref|ZP_03949809.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
 gi|227554052|ref|ZP_03984099.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
 gi|229549320|ref|ZP_04438045.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
 gi|255972029|ref|ZP_05422615.1| peptide chain release factor 1 [Enterococcus faecalis T1]
 gi|255975086|ref|ZP_05425672.1| peptide chain release factor 1 [Enterococcus faecalis T2]
 gi|256616929|ref|ZP_05473775.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
 gi|256763197|ref|ZP_05503777.1| peptide chain release factor 1 [Enterococcus faecalis T3]
 gi|256853870|ref|ZP_05559235.1| peptide chain release factor 1 [Enterococcus faecalis T8]
 gi|256957798|ref|ZP_05561969.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
 gi|256961203|ref|ZP_05565374.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
 gi|256963678|ref|ZP_05567849.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
 gi|257079736|ref|ZP_05574097.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
 gi|257081918|ref|ZP_05576279.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
 gi|257084460|ref|ZP_05578821.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
 gi|257087541|ref|ZP_05581902.1| peptide chain release factor 1 [Enterococcus faecalis D6]
 gi|257090700|ref|ZP_05585061.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
 gi|257416748|ref|ZP_05593742.1| peptide chain release factor 1 [Enterococcus faecalis AR01/DG]
 gi|257419965|ref|ZP_05596959.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|293384152|ref|ZP_06630046.1| peptide chain release factor 1 [Enterococcus faecalis R712]
 gi|293386966|ref|ZP_06631535.1| peptide chain release factor 1 [Enterococcus faecalis S613]
 gi|294779688|ref|ZP_06745078.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
 gi|300861212|ref|ZP_07107299.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
 gi|307270729|ref|ZP_07552020.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
 gi|307271624|ref|ZP_07552895.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
 gi|307276806|ref|ZP_07557917.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
 gi|307285597|ref|ZP_07565736.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
 gi|307290429|ref|ZP_07570344.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
 gi|312899933|ref|ZP_07759251.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
 gi|312905241|ref|ZP_07764361.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
 gi|312907897|ref|ZP_07766880.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
 gi|312953588|ref|ZP_07772425.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
 gi|312978574|ref|ZP_07790312.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
 gi|46576782|sp|Q831F6|RF1_ENTFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29344508|gb|AAO82266.1| peptide chain release factor 1 [Enterococcus faecalis V583]
 gi|227072848|gb|EEI10811.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
 gi|227176800|gb|EEI57772.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
 gi|229305557|gb|EEN71553.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
 gi|255963047|gb|EET95523.1| peptide chain release factor 1 [Enterococcus faecalis T1]
 gi|255967958|gb|EET98580.1| peptide chain release factor 1 [Enterococcus faecalis T2]
 gi|256596456|gb|EEU15632.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
 gi|256684448|gb|EEU24143.1| peptide chain release factor 1 [Enterococcus faecalis T3]
 gi|256710813|gb|EEU25856.1| peptide chain release factor 1 [Enterococcus faecalis T8]
 gi|256948294|gb|EEU64926.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
 gi|256951699|gb|EEU68331.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
 gi|256954174|gb|EEU70806.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
 gi|256987766|gb|EEU75068.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
 gi|256989948|gb|EEU77250.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
 gi|256992490|gb|EEU79792.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
 gi|256995571|gb|EEU82873.1| peptide chain release factor 1 [Enterococcus faecalis D6]
 gi|256999512|gb|EEU86032.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
 gi|257158576|gb|EEU88536.1| peptide chain release factor 1 [Enterococcus faecalis ARO1/DG]
 gi|257161793|gb|EEU91753.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|291078632|gb|EFE15996.1| peptide chain release factor 1 [Enterococcus faecalis R712]
 gi|291083636|gb|EFE20599.1| peptide chain release factor 1 [Enterococcus faecalis S613]
 gi|294453242|gb|EFG21654.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
 gi|295113546|emb|CBL32183.1| bacterial peptide chain release factor 1 (bRF-1) [Enterococcus sp.
           7L76]
 gi|300850251|gb|EFK78001.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
 gi|306498622|gb|EFM68124.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
 gi|306502821|gb|EFM72086.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
 gi|306506443|gb|EFM75602.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
 gi|306511502|gb|EFM80501.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
 gi|306513039|gb|EFM81680.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
 gi|310625988|gb|EFQ09271.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
 gi|310628426|gb|EFQ11709.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
 gi|310631478|gb|EFQ14761.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
 gi|311288723|gb|EFQ67279.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
 gi|311292929|gb|EFQ71485.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
 gi|315025302|gb|EFT37234.1| peptide chain release factor 1 [Enterococcus faecalis TX2137]
 gi|315030387|gb|EFT42319.1| peptide chain release factor 1 [Enterococcus faecalis TX4000]
 gi|315032691|gb|EFT44623.1| peptide chain release factor 1 [Enterococcus faecalis TX0017]
 gi|315035852|gb|EFT47784.1| peptide chain release factor 1 [Enterococcus faecalis TX0027]
 gi|315143714|gb|EFT87730.1| peptide chain release factor 1 [Enterococcus faecalis TX2141]
 gi|315148532|gb|EFT92548.1| peptide chain release factor 1 [Enterococcus faecalis TX4244]
 gi|315150059|gb|EFT94075.1| peptide chain release factor 1 [Enterococcus faecalis TX0012]
 gi|315151855|gb|EFT95871.1| peptide chain release factor 1 [Enterococcus faecalis TX0031]
 gi|315159264|gb|EFU03281.1| peptide chain release factor 1 [Enterococcus faecalis TX0312]
 gi|315161810|gb|EFU05827.1| peptide chain release factor 1 [Enterococcus faecalis TX0645]
 gi|315168548|gb|EFU12565.1| peptide chain release factor 1 [Enterococcus faecalis TX1341]
 gi|315170191|gb|EFU14208.1| peptide chain release factor 1 [Enterococcus faecalis TX1342]
 gi|315172490|gb|EFU16507.1| peptide chain release factor 1 [Enterococcus faecalis TX1346]
 gi|315574712|gb|EFU86903.1| peptide chain release factor 1 [Enterococcus faecalis TX0309B]
 gi|315579264|gb|EFU91455.1| peptide chain release factor 1 [Enterococcus faecalis TX0630]
 gi|315580976|gb|EFU93167.1| peptide chain release factor 1 [Enterococcus faecalis TX0309A]
 gi|323481494|gb|ADX80933.1| peptide chain release factor 1 [Enterococcus faecalis 62]
 gi|327535788|gb|AEA94622.1| peptide chain release factor RF1 [Enterococcus faecalis OG1RF]
 gi|329578086|gb|EGG59499.1| peptide chain release factor 1 [Enterococcus faecalis TX1467]
          Length = 357

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 240/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   +     +++L++E A     +     Y Q  +   D  
Sbjct: 3   DQLQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D+E+ ++A+ E+  ++KE   LE+ I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLSE-NLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++YA  + WK EVL ++    GGYKE++  ISG  VFS++K+ESG H
Sbjct: 122 EAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++++  +DIR+D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVEIELADKDIRVDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMKVLRAR+YD  ++   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L G +D+II+ L+   Q   +   
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEM 354


>gi|42520141|ref|NP_966056.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58698355|ref|ZP_00373269.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|81652805|sp|Q73IC2|RF1_WOLPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42409878|gb|AAS13990.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58535109|gb|EAL59194.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 359

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 184/359 (51%), Positives = 251/359 (69%), Gaps = 5/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 + DLK +F +IE  +    ++    +I L++EY+ + PII  I  Y+  K+E  
Sbjct: 1   MDMENNLQDLKKKFNDIERNLENPTNLSQKEFITLSKEYSELRPIIKIIDEYNTLKEEIS 60

Query: 61  DLHTVIGDHNSDSEIRD-LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           DL  ++ D NS+ +I++   +      +  + +++ ++   LLPKD DD ++ ILEIRAG
Sbjct: 61  DLEEIMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF   LFRMY++YA  R WK E +S S+   GGYKE  A I+G  VF+R+KFE
Sbjct: 121 TGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+SGR+HTSAATVA+LPE  E+D  I  +D+RID  R+SG GGQ VNT
Sbjct: 181 SGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKDLRIDVYRSSGPGGQSVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH+PTGI+V    EKSQH+N+ +A+KVLRARLY++ER++   ERS  RK QIG
Sbjct: 241 TDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTMRKSQIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF Q RITDHRINLT ++LE ++ +G +D+ I  L++ ++A+ +   S
Sbjct: 301 SGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELDEFIEALISRNEAERLAGES 359


>gi|323339960|ref|ZP_08080227.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
 gi|323092602|gb|EFZ35207.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
          Length = 362

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 156/360 (43%), Positives = 236/360 (65%), Gaps = 6/360 (1%)

Query: 1   MVF-LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKK 56
           M       ++  L +R+ E+   +S+   +     +++L++E A +   + K   Y Q  
Sbjct: 1   MKMDKLFDRLQMLADRYEELGELLSDPDVIADSKRFMELSKEMADLRETVEKYEKYKQVV 60

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           Q+ +D   ++     D E+  + + E+   + E ++LE EI  LLLPKD +D K  I+EI
Sbjct: 61  QQIKDDEEMLS-TGLDDEMAAMVKEELSDSKNEKQKLEQEIKILLLPKDPNDGKDLIMEI 119

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           R   GG EA+LF  DLF MY +YA  + W +EV+  +  + GG+KEI  TI+G+ V+S++
Sbjct: 120 RGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKNVWSKL 179

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+ESG HRVQRVP TE++GRVHTS ATV V+PE  ++++D+  +DIR+D  R+SG+GGQH
Sbjct: 180 KYESGAHRVQRVPVTESAGRVHTSTATVVVMPEEEDVEIDLDPKDIRVDVYRSSGAGGQH 239

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N T SAVR+TH+PTGI+V    ++SQ QNR +AMK+L+AR+YD  + +  +E   NRK 
Sbjct: 240 INKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYKSQEQSEYDENRKS 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRSERIRTYN+ Q R+TDHRI L+L KL+ ++ G +DD+I+ L+   Q K +   
Sbjct: 300 AVGTGDRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELDDVIDALVLYDQTKALEEL 359


>gi|302036343|ref|YP_003796665.1| peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
 gi|300604407|emb|CBK40739.1| Peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
          Length = 386

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 159/360 (44%), Positives = 240/360 (66%), Gaps = 6/360 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQ 57
           M     K+   +  RF E+  ++ +   ++      KL +E   +     +   Y + K+
Sbjct: 27  MEDGLIKKWEGMAARFQELTNQLMDPSVLNQPGMIHKLNKERTELEEPALQFIAYCEAKK 86

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +D+  ++ D ++ ++++ L   E   +++++ E+E+     L PKD  D+K+  LEIR
Sbjct: 87  QLEDVSALLQDASTGADMKQLFAEESDHLQQQVLEIEHRAKDFLTPKDPRDEKNMFLEIR 146

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY +YA   + K+EV+ +S+   GGY+E++A + G+G + R++
Sbjct: 147 AGTGGDEAALFAGDLFRMYLKYAERNRLKLEVVDASETGIGGYREVIALLEGKGAYGRLR 206

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESGVHRVQRVP TEASGR+HTS  TVAV+PE  E++V I  +D+RIDT  +SG+GGQ V
Sbjct: 207 YESGVHRVQRVPTTEASGRIHTSTVTVAVMPEVDEVEVHIDPKDLRIDTFCSSGAGGQSV 266

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTT SAVRITHIPTG++V    E+SQ +NR +AM+ LRAR+ + ER++   E + NRK Q
Sbjct: 267 NTTYSAVRITHIPTGVVVSCQDERSQLKNRTKAMRNLRARIVEAEREKQEAEIAQNRKSQ 326

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +G+GDRSE+IRTYNF Q R+TDHRI LT++KL+ VL G +++I+  L   +  + + S  
Sbjct: 327 VGTGDRSEKIRTYNFPQNRVTDHRIGLTVHKLDQVLAGDLEEIVQALRAHY--EHLASLE 384


>gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 361

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 164/350 (46%), Positives = 239/350 (68%), Gaps = 6/350 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L  ++  IE  +S+   +     Y +L+ E+  ++ +      Y + ++E  +  
Sbjct: 8   DKLEKLTEKYKRIEEELSKPEVIQDVKRYRELSREHKELAELYETYQEYKRLQRELNEAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++       E+++LAQ E+  I+  I ELE ++  LL+PKD +D K+ ILEIRAGTGG 
Sbjct: 68  ELLKSPE--KELKELAQEEIEDIQSRIPELEEKLKLLLVPKDPNDSKNVILEIRAGTGGE 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFV DL RMY++YA  + WK  +L+++    GGYKE++A I G G +SR+K+ESGVH
Sbjct: 126 EAALFVADLLRMYQKYAEDKGWKFSILNANKTGLGGYKEVIALIEGEGAYSRLKYESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GR+HTS ATVAVLPEA E DV+I  +D++I+T RASG+GGQ+VNTT++A
Sbjct: 186 RVQRIPVTESGGRIHTSTATVAVLPEADEADVEINPQDLKIETFRASGAGGQYVNTTETA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH PTGI+V    E+SQ QN+ +A+K+L A+L D   ++   E +  RK Q+G+G+R
Sbjct: 246 VRITHTPTGIVVSCQDERSQFQNKQKALKILYAKLKDFYERKKREEIARERKEQVGTGER 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           SE+IRTYNF Q R+TDHR+NLTLYKL  VL+G +D+ I+ L      + +
Sbjct: 306 SEKIRTYNFPQNRVTDHRVNLTLYKLNDVLEGKLDEFIDALRAKELEERL 355


>gi|332295519|ref|YP_004437442.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
 gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
          Length = 361

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 172/352 (48%), Positives = 240/352 (68%), Gaps = 6/352 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I  L NR+ EI   +S    ++   KL   ++E A +  +++  +  ++ K    DL  +
Sbjct: 10  ILKLINRYKEINELLSSLEIINNPSKLISLSQEKAELEEVVNNYNELNKLKNYLSDLKEL 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
              ++ D EI+ LA+ E   +EK I  LE+++   +LPKD  D+K+ ILEIRAG GG EA
Sbjct: 70  --KNSEDEEIKALAEEEFQVVEKNIENLESKLLNFILPKDPLDEKNIILEIRAGAGGEEA 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF  +L RMY RYA  +  K E+LS ++   GG KE + +I G+ ++SR+KFESG HRV
Sbjct: 128 ALFASELLRMYLRYAERKNAKTEILSINETGIGGIKEAIISIKGKRIYSRLKFESGTHRV 187

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE+ GR+HTS ATVAVLPEA EID+ I  +D++IDT RA G+GGQHVN TDSAVR
Sbjct: 188 QRVPETESGGRIHTSTATVAVLPEADEIDITIDEKDLKIDTFRAGGAGGQHVNKTDSAVR 247

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH+PTGI+V    E+SQ QN+ +AM++L A++ + +R     E + +R++Q+GSGDRSE
Sbjct: 248 ITHLPTGIVVACQDERSQFQNKEKAMRILAAKILEEKRVASEKEIAMSRRIQVGSGDRSE 307

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +IRTYNF QGR+TDHRINLTLY+L  VL G +D+II+ L+ A   + +   S
Sbjct: 308 KIRTYNFPQGRVTDHRINLTLYRLNEVLDGDLDEIIDALIAAENIRKLELLS 359


>gi|260171648|ref|ZP_05758060.1| peptide chain release factor 1 [Bacteroides sp. D2]
 gi|299148543|ref|ZP_07041605.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23]
 gi|315919960|ref|ZP_07916200.1| peptide chain release factor 1 [Bacteroides sp. D2]
 gi|298513304|gb|EFI37191.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23]
 gi|313693835|gb|EFS30670.1| peptide chain release factor 1 [Bacteroides sp. D2]
          Length = 370

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 146/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF EI   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD+E+R++A+ E+   ++ +  LE EI  +L+P D  D K+ ILEIR G GG 
Sbjct: 69  NILA-NESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++   + WK+EV ++++   GG+KE+V +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +I            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|297181089|gb|ADI17288.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_17D04]
          Length = 359

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 187/359 (52%), Positives = 250/359 (69%), Gaps = 4/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
               + +  +  R  E+E R++++ S+  D    L+ E   + P+  +I +  + + +  
Sbjct: 1   MSIAQSMDKVLARRDEVESRLADAASMSPDELASLSRELFELRPVCEQIDLVRRLEGDRD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +  +   D+E+ ++AQ E+  IE  + E  N +  LLLP+D DD ++ ILE+RAGT
Sbjct: 61  AAVMLAEEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLF MY+R+AA   W+ EV+  S+   GGYKE  A I+G  VF+R+KFES
Sbjct: 121 GGDEAALFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA ++D+D+   D+RID  RASG GGQ VNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDVDIDVQESDLRIDVFRASGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGIMV+  + KSQH+NR +AMK+LRARLYD ER R+  ER+A+RK Q+GS
Sbjct: 241 DSAVRITHIPTGIMVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAERAASRKGQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF QGR+TDHRINLTLYKL+ V+ G  +D+++  L+   QA+ +    E
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQAQRLAEGGE 359


>gi|300214391|gb|ADJ78807.1| Peptide chain release factor 1 (RF-1) [Lactobacillus salivarius
           CECT 5713]
          Length = 360

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 237/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L++R+ E+   +S+   +     + KL++E A +   + K + Y +  Q+  D  
Sbjct: 6   DRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQISDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+  L + E+  ++ E  +LE EI  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 66  EMLSDGLDD-EMASLVKEELSNVKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DLF MY +YA  + W +EV+  +  + GG+KEI   I+G  V+S++K+ESG H
Sbjct: 125 EASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE++GRVHTS ATV V+PE  ++++++  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 185 RVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    ++SQ QNR +AMK+L+AR+YD   ++  +E  ANRK  +G+GDR
Sbjct: 245 VRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ Q R+TDHRI L+L KL+ ++ G ++D+I+ L+   Q K +    
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQTKAMEKLE 358


>gi|90961566|ref|YP_535482.1| peptide chain release factor 1 [Lactobacillus salivarius UCC118]
 gi|119361553|sp|Q1WUD6|RF1_LACS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90820760|gb|ABD99399.1| Bacterial Peptide Chain Release Factor 1 [Lactobacillus salivarius
           UCC118]
          Length = 360

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 236/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L++R+ E+   +S+   +     + KL++E A +   + K + Y +  Q+  D  
Sbjct: 6   DRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQISDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+  L + E+   + E  +LE EI  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 66  EMLSDGLDD-EMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DLF MY +YA  + W +EV+  +  + GG+KEI   I+G  V+S++K+ESG H
Sbjct: 125 EASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE++GRVHTS ATV V+PE  ++++++  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 185 RVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    ++SQ QNR +AMK+L+AR+YD   ++  +E  ANRK  +G+GDR
Sbjct: 245 VRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ Q R+TDHRI L+L KL+ ++ G ++D+I+ L+   Q K +    
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQTKAMEKLE 358


>gi|322383119|ref|ZP_08056946.1| peptide chain release factor 1-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321152781|gb|EFX45407.1| peptide chain release factor 1-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 356

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 153/357 (42%), Positives = 227/357 (63%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +        KL   ++E + +         Y Q   + + 
Sbjct: 1   MLDRLQALADRYEKLSELLCDPDVTSDTKKLREYSKEQSGLQEAYDTYMEYKQVLGQLEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  +   D E+ +L ++E+  +     ELE  +  L+LPKD +D+K+ I+E+R   G
Sbjct: 61  AKAMQKEKLDD-EMSELVKMEIEELSGRKEELEERLKILMLPKDPNDNKNVIVEVRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA  + WK EVL ++ ND GG+KEI   I G G +S++K+ESG
Sbjct: 120 GDEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMIKGNGAYSKLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+P TE+ GR+HTS +TVAV+PE  +ID++I   DIR+DT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPVTESGGRIHTSTSTVAVMPEMEDIDIEIKDSDIRVDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+      KSQ+ N+ +A++VLRAR+YD  R+    + +  RK ++G+G
Sbjct: 240 SAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYDQVRQEEEAKYAGERKSKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF Q R+TDHRI LTL+KL+ +L G +++II  L  A QA+ +    +
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLHKLDSILGGDLEEIITALTMAAQAEQLEKGEQ 356


>gi|288819151|ref|YP_003433499.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
 gi|288788551|dbj|BAI70298.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
 gi|308752735|gb|ADO46218.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
          Length = 357

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 157/360 (43%), Positives = 236/360 (65%), Gaps = 11/360 (3%)

Query: 3   FLS---HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKK 56
            L     +++  ++ R+ EI+ R+S    +     + KL+++   I  ++     Y + +
Sbjct: 1   MLPAQLEEKLEAIEKRYEEIQNRLSSQDVIRDRAQFAKLSKDLKDIGEVVDLYRRYKKVQ 60

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++ ++   ++     +   ++  +      E+  +EL      L+LPKD  D ++ ILEI
Sbjct: 61  KDIKEAQELLKSREFEELAKEEIKRLKREEERIEKEL----KILMLPKDERDSRNVILEI 116

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           RAG GG EAALFV DL  MY++YA  R WK  +LS++    GGYKE++A I G G +SR+
Sbjct: 117 RAGVGGEEAALFVADLLNMYQKYAEERGWKFSILSANRTGLGGYKEVIALIEGVGAYSRL 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+ESGVHRVQR+P TE+ GR+HTS ATVAVLPE  E +++I  +D++I+T RASG+GGQ+
Sbjct: 177 KYESGVHRVQRIPRTESGGRIHTSTATVAVLPEVDETELEINPQDLKIETFRASGAGGQY 236

Query: 237 VNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTT++AVR+THIPTGI +    E+SQ QN+ +A+K+L ARL D   ++   E +  RK+
Sbjct: 237 VNTTETAVRVTHIPTGISVACQDERSQFQNKQKALKILYARLKDFYERQKEEEIAKERKM 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+G+G+RSE+IRTYNF QGR+TDHRINLTLYKL  VL+G +D+II  L+     + + + 
Sbjct: 297 QVGTGERSEKIRTYNFPQGRVTDHRINLTLYKLHDVLEGKLDEIIEALIQHDIDEKLKAQ 356


>gi|329957131|ref|ZP_08297698.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056]
 gi|328523399|gb|EGF50498.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056]
          Length = 370

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 146/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  +++    Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + +D+E+R++A+ E+ A +    ELE EI  LL+P D  D ++ ILEIR G GG 
Sbjct: 69  EIIA-NETDAEMREMAREELDACQARQPELEEEIKLLLVPADPQDSRNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+++ S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|239787352|emb|CAX83829.1| Peptide chain release factor RF-1 [uncultured bacterium]
          Length = 354

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 180/358 (50%), Positives = 252/358 (70%), Gaps = 7/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
               K++  +  R+ +++ ++ +       +  L++EYA +  I   I  Y    Q++ D
Sbjct: 1   MTIQKKLDQIIERYLDLQKQLEQEVCDPKKFAGLSKEYAGLENIYQTILNYKSLLQQKAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    +D  +R LA+ E+ A++    E    +  LLLPKD DD++S ILEIRAGTG
Sbjct: 61  AEIML----TDPGMRQLAEEELGALKLATEETWQMLRVLLLPKDVDDERSAILEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  DL RMY+RYAA+  W+ +VL  S+   G  KE    I G+GVF+++KFESG
Sbjct: 117 GDEAGLFAADLMRMYQRYAAIHGWQFDVLGLSETGLGSVKEAQVGIVGKGVFAKLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGRVHTSAATVAVLPE  ++D++I  ED+RID  RASG+GGQHVNTTD
Sbjct: 177 VHRVQRVPETESSGRVHTSAATVAVLPEVEDVDIEIKDEDLRIDICRASGAGGQHVNTTD 236

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V   + +SQH+N+ +AMK++RARLYD+ ++     R+A+RK Q+GSG
Sbjct: 237 SAVRLTHLPTGLVVAQQDERSQHKNKAKAMKIMRARLYDLRKREQDEVRAADRKSQVGSG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF QGR+TDHRINLTLYKL+ V+QG  +D++I+ L+   QA+ +G+A +
Sbjct: 297 DRSERIRTYNFPQGRVTDHRINLTLYKLDQVMQGEALDELIDNLIADDQARKLGAAED 354


>gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 360

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 164/358 (45%), Positives = 233/358 (65%), Gaps = 5/358 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +Q+     R+ E+   +S+   ++    +  L +E A + P +     Y +     +
Sbjct: 1   MLEEQLDTFIARYQELAELLSDPDVINDHKRFRDLAKEEADLRPKVGTFKHYKEVVSGIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +I +  S+ ++ +LA+ E+  ++ E  +LE EI  L+LP D +DDK+ I+EIR   
Sbjct: 61  DTEELIKET-SEEDMLELAKSELDQLKAERDDLEEEIKVLMLPSDPNDDKNIIMEIRGAA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA LF  DLF MY RYA  + W VEV  +S ND GGYKEI+  ISG  V+S++K+ES
Sbjct: 120 GGDEAQLFAADLFEMYSRYAESQGWHVEVADASSNDLGGYKEIILQISGDKVYSKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTS ATV V+PE  ++D +I  +DIR D  RASG+GGQHVN T
Sbjct: 180 GAHRVQRVPKTESQGRVHTSTATVGVMPELEDLDFEIDEKDIRTDIYRASGAGGQHVNKT 239

Query: 241 DSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
            SAVR+THIPTG  +    ++SQ QNR +AM +LR+R+YD  + +  +E    RK  +G+
Sbjct: 240 SSAVRMTHIPTGIQVAMQDQRSQQQNREKAMLILRSRVYDYYQSQEQDEYDEKRKNLVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYN+ Q R+TDHRINLTL KL+ ++ G +D+II+ L+ A QA+ +   +E
Sbjct: 300 GDRSERIRTYNYPQNRVTDHRINLTLQKLDRIMGGELDEIIDALILADQAQKLEELNE 357


>gi|167765221|ref|ZP_02437334.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC
           43183]
 gi|167696849|gb|EDS13428.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC
           43183]
          Length = 370

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 145/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  +++    Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLNGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + +D+E+R++A+ E+ A +    ELE EI  LL+P D  D ++ ILEIR G GG 
Sbjct: 69  EIIA-NETDAEMREMAREELDACQARQPELEEEIKLLLVPADPQDSRNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + W++++ S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYTKYCEAKGWRLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|114327270|ref|YP_744427.1| peptide chain release factor 1 [Granulibacter bethesdensis CGDNIH1]
 gi|119361545|sp|Q0BUJ8|RF1_GRABC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114315444|gb|ABI61504.1| bacterial peptide chain release factor 1 (RF-1) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 352

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 166/355 (46%), Positives = 237/355 (66%), Gaps = 5/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  +  R  E+   +SE  + D++   + E A + P++++I      ++   + 
Sbjct: 1   MSFTANLDRIVARAEELRASLSEGLNGDSFAAASRELAELEPVVARIEELWAAERGLAEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D ++R+LA+ E   + +++  L  EI   LLPKD  D++S ILEIR   GG
Sbjct: 61  EAMLA----DPDMRELAESEAEILREKLPSLTREIRIALLPKDEADERSAILEIRPAAGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF   LF MY+RYA +R W+ E+L   D   GG K  +A I+GR VF+R+K+ESGV
Sbjct: 117 DEASLFAAQLFSMYQRYAEIRGWRFEILEYDDTGLGGLKGGMAEITGRSVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTS  TVAVLPEA ++DV +   D+RID  RASG+GGQHVN T+S
Sbjct: 177 HRVQRVPATESQGRIHTSTVTVAVLPEAEDVDVQVDEGDLRIDVYRASGAGGQHVNKTES 236

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+P+GI+V    EKSQH+NR +AMK+L+ARLY+ +R  +   R+A+R+ Q+G+GD
Sbjct: 237 AVRITHLPSGIVVAMQEEKSQHKNRAKAMKILKARLYEQQRAALHASRAADRRAQVGTGD 296

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR++DHRINLTLYK++ V+ G +DD ++ L    QA  + +  
Sbjct: 297 RSERIRTYNFPQGRVSDHRINLTLYKIDRVMLGELDDFVDALTAEDQAARLSAQE 351


>gi|225386765|ref|ZP_03756529.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
           DSM 15981]
 gi|225047127|gb|EEG57373.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
           DSM 15981]
          Length = 358

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 257/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+   + E+ L + +         + KL +E A ++PI+     Y Q KQ+ +D  
Sbjct: 3   DKLDDILIHYEELMLMLGDPDVTQDTKRFTKLMKEQADLAPIVEAYKQYKQAKQDVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R++A+ E+   +K I +LE+E+  LLLPKD +DDK+ ILEIRAG GG 
Sbjct: 63  AMLEEESD-EEMREMAKEELADAKKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  YA  ++WKVE++S ++N  GG+KE+VA ++G+G +S++K+ESGVH
Sbjct: 122 EAALFAAELYRMYTNYADSQRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAV+PEA E+DV I + D RID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI++ + +EKSQ QN+ +A ++LR++L+D+E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDIELEKRQSSEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYK++ ++ G I ++++ L+ A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQAAKLSKLNE 356


>gi|188534015|ref|YP_001907812.1| peptide chain release factor 1 [Erwinia tasmaniensis Et1/99]
 gi|238689693|sp|B2VEH7|RF1_ERWT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188029057|emb|CAO96925.1| Peptide chain release factor 1 (RF-1) [Erwinia tasmaniensis Et1/99]
          Length = 360

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+E  + ++  +     +  L+ EYA ++ +      + Q +++ +    
Sbjct: 8   KLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQSQEDIETAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    SD+E+RD+AQ E+        ELE ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  ML----SDAEMRDMAQEELQTARAASEELEQQLQVLLLPKDPDDERNCYLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+WKVEV+S+++ + GGYKE++A + G G + R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVVGEGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  DI   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL +R+   E  R   E S+ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLT+Y+L+  ++G +D +I P++  +QA  + + S
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTIYRLDEAMEGKLDALIEPIVQEYQADQLAALS 357


>gi|198284467|ref|YP_002220788.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665453|ref|YP_002427134.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248988|gb|ACH84581.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517666|gb|ACK78252.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 365

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 175/364 (48%), Positives = 242/364 (66%), Gaps = 8/364 (2%)

Query: 1   MVFLS--HKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQK 55
           M        Q+  L  RF E+   ++          +  L++E   I P++  +  + Q+
Sbjct: 1   MSLSPRLQSQLEQLAFRFDELSQLLASPGAAGDTQRFQSLSKELGEIGPVLELLRRHQQR 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           +++  +   ++     D+E+R LA  EV A E E+ ++E  +   LLPKD +DD+S  LE
Sbjct: 61  QRDRDEGGRML-LEEQDAELRALASEEVAAAEAELDQIEAALRIRLLPKDPNDDRSVFLE 119

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           IRAGTGG EAALF G L RMY RYA  + + V +LS+SD++ GGYKE+V  ISGRG +S 
Sbjct: 120 IRAGTGGEEAALFAGVLARMYTRYAESKGFGVVILSASDSERGGYKEVVLEISGRGAYSC 179

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGG 234
           +KFESG HRVQRVP TE  GR+HTSA TVAVLPE   +        D+RIDT RASG+GG
Sbjct: 180 LKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDTVSEITINPADLRIDTYRASGAGG 239

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QH+N TDSA+RITH+P+G++V    ++SQH+NR RAM +L+ARL + E+++  +  +  R
Sbjct: 240 QHINKTDSAIRITHVPSGMVVTCQEDRSQHKNRARAMALLQARLLEQEQEKQQSAAAQTR 299

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +L +GSGDRSERIRTYNF QGRITDHRINLTLY+LE VL+G +D +I PL+  +QA ++ 
Sbjct: 300 RLLVGSGDRSERIRTYNFPQGRITDHRINLTLYRLEAVLEGDLDAVIEPLIKEYQADLLQ 359

Query: 354 SASE 357
              +
Sbjct: 360 HMGD 363


>gi|83592089|ref|YP_425841.1| peptide chain release factor 1 [Rhodospirillum rubrum ATCC 11170]
 gi|119361593|sp|Q2RWE1|RF1_RHORT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83575003|gb|ABC21554.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodospirillum
           rubrum ATCC 11170]
          Length = 354

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 185/357 (51%), Positives = 248/357 (69%), Gaps = 7/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMS-ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
               + +  +  R  E+   +S  +   + +++++ E A ++P++  I   D  K E   
Sbjct: 1   MSLEENLSRVVARHDELRALLSTSAGGGEGFVRMSRELADLAPVVEAIGRLDDAKAELAG 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D ++RDLA+ EVL +E EI  LE+ +  LLLP+D  DD+  ILE+RAGTG
Sbjct: 61  ARALL----DDPDMRDLAREEVLRLEAEIPALEHGVKLLLLPRDEADDRGVILEVRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL RMYERYA  R W+ EV+ +SD D GG KE  A ISGRGVF+R+KFESG
Sbjct: 117 GDEAALFAGDLLRMYERYAQERGWRFEVMEASDTDIGGIKEASAAISGRGVFARLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GR+HTSAATVAVLPEA E+DV+I  +D+RIDT R+ G+GGQHVNTTD
Sbjct: 177 VHRVQRVPVTEGGGRIHTSAATVAVLPEAEEVDVEIEEKDLRIDTYRSQGAGGQHVNTTD 236

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+P+G++     EKSQH+N+ +AM++LR +LYD  R+   + R+  R++Q+GSG
Sbjct: 237 SAVRITHLPSGVVAQCQDEKSQHKNKAKAMRMLRTKLYDHARQTADDARAEARRVQVGSG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTL++L  VL G  +D++I PL+   QA  +    
Sbjct: 297 DRSERIRTYNFPQGRVTDHRIGLTLHRLPEVLAGTALDEVIEPLIAEDQATRMAEIG 353


>gi|270261428|ref|ZP_06189701.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
 gi|270044912|gb|EFA18003.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
          Length = 361

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++  +   D +  L+ EY+ ++ +      + Q +++      
Sbjct: 8   KLEALQERHEEVQALLGDAGVIAEQDRFRALSREYSQLTDVSRCFLEWRQVQEDLATAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++   LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEEMKQAKAATEELEQQLQVLLLPKDPDDERGIFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A +SG GV+ ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +   E ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQEEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLT+Y+L+ V++G +D +I P++  +QA  + + S
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTIYRLDEVMEGKLDMLIQPIVQEYQADQLAALS 357


>gi|160887043|ref|ZP_02068046.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483]
 gi|237715527|ref|ZP_04546008.1| peptide chain release factor 1 [Bacteroides sp. D1]
 gi|262408537|ref|ZP_06085083.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22]
 gi|293369398|ref|ZP_06615983.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f]
 gi|294646503|ref|ZP_06724140.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a]
 gi|294807531|ref|ZP_06766328.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b]
 gi|298482182|ref|ZP_07000370.1| peptide chain release factor 1 [Bacteroides sp. D22]
 gi|156107454|gb|EDO09199.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483]
 gi|229444236|gb|EEO50027.1| peptide chain release factor 1 [Bacteroides sp. D1]
 gi|262353402|gb|EEZ02496.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22]
 gi|292635565|gb|EFF54072.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f]
 gi|292638122|gb|EFF56503.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a]
 gi|294445232|gb|EFG13902.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b]
 gi|295086791|emb|CBK68314.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           xylanisolvens XB1A]
 gi|298271739|gb|EFI13312.1| peptide chain release factor 1 [Bacteroides sp. D22]
          Length = 370

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 147/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF EI   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD+E+R++A+ E+   ++ +  LE EI  +L+P D  D K+ ILEIR G GG 
Sbjct: 69  NILA-NESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++   + WK+EV ++++   GG+KEIV +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEIVCSVTGDNVYGILKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +I            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|154500225|ref|ZP_02038263.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
           29799]
 gi|150270957|gb|EDM98231.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
           29799]
          Length = 355

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 169/357 (47%), Positives = 243/357 (68%), Gaps = 8/357 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L+  + ++  R++   +        KL +E + + P++     Y +++Q+ ++
Sbjct: 1   MLDKLRSLELHYEDLVARLNAPETYGDPALVAKLNKEQSELEPLVETYRRYIRRQQDMEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             +++    SD ++++LAQ E    ++E  ELE ++  LLLP D +D K+ I+EIRAG G
Sbjct: 61  ARSLM----SDPDMKELAQEEFAQAKEEAEELEQKMKILLLPTDPNDGKNVIVEIRAGVG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF   L+RMY  YA  R WKVEV S ++ + GG KEI  T+ G G +SR+KFESG
Sbjct: 117 GEEAALFANSLYRMYSMYAETRHWKVEVASLNETELGGIKEISFTVEGGGAYSRLKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+  R+HTS  TVAVLPEA E+DVDI   DI +   R+SG+GGQH+N T 
Sbjct: 177 VHRVQRVPETESGDRIHTSTVTVAVLPEAEEVDVDINPADIEMQVFRSSGAGGQHINKTS 236

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H PTG++V    E+SQ QNR +AM++LR+RLY+ E++R++ E S  R+ Q+G+G
Sbjct: 237 SAVRLIHKPTGMVVECQQERSQFQNRDKAMQILRSRLYEAEQQRVSAEWSEERRSQVGTG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            R+ERIRTYNF QGR+TDHRI LTLYKLE V+ G +D+II+ L+TA QA+ +  + E
Sbjct: 297 MRNERIRTYNFPQGRLTDHRIGLTLYKLEDVMNGDLDEIIDSLITADQAERLKQSGE 353


>gi|146337703|ref|YP_001202751.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278]
 gi|146190509|emb|CAL74508.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278]
          Length = 361

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 188/349 (53%), Positives = 252/349 (72%), Gaps = 2/349 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E  +    + D Y+++T E A ++P+I  +  Y    +E  
Sbjct: 1   MSSLPEAKLDVLLAHHASLEAELLGQVNSDRYVQITRELAELNPLIDAVKAYRAGVKELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +I D ++D+E+R +A+ E   +     ELE +I   LLPKD  DD++ +LEIRAGT
Sbjct: 61  DTEALIADPDTDAEMRAMAESERDELVARRGELEQKIRIALLPKDAMDDRNVVLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYER+A+L+ WKVEV+S+S+   GGYKEI+A + GRG F+++KFES
Sbjct: 121 GGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  ++DVDI  +D+RI+TMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEIEDVDVDIKQDDLRIETMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITHIPTGI+V     +SQH+NR  AM +LR+R+YD ER+++   RSA RK ++GS
Sbjct: 241 ESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVDAARSAERKEKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++++ L T H
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELVDALTTEH 349


>gi|21672964|ref|NP_661029.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
 gi|28201874|sp|Q8KG45|RF1_CHLTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21646023|gb|AAM71371.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
          Length = 357

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 231/353 (65%), Gaps = 6/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +K++F  IE ++S+   V   + + KL +EY+++  I+     + + K++  + H
Sbjct: 3   DKLQSIKDKFQTIEQQLSDPEVVADQNRFRKLNKEYSSLKEIVRAYDEWSRTKKQLDEAH 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++   + +D E+R L + E   +++ + +LE ++  LLLPKD  D ++ I+EIRAGTGG 
Sbjct: 63  SM-QKNENDPEMRALVEEEAGELQERLPKLEQQLKILLLPKDEADSRNAIIEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGRGVFSRMKFESGV 182
           EA LF  DL RMY+RYA  + W  + L  S+    G  KE+   +SG  V+  +KFESGV
Sbjct: 122 EAGLFAADLMRMYQRYAERQGWSCQTLEVSEGSVPGSLKEVSLEVSGHNVYGILKFESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAA+VAVLPEA E+DV+I  ED+ IDT R+ G GGQ+VN  ++
Sbjct: 182 HRVQRVPETETQGRIHTSAASVAVLPEAEEVDVEIRKEDLLIDTFRSGGKGGQNVNKVET 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+P+GI+V    E+SQ QNR RAMK+LR++LYD++       R+  R+  + +GD
Sbjct: 242 AVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDLQIAEQQKSRADLRRSMVTTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RS +IRTYNF Q R+TDHRI  T + L  ++QG +D +I  L    QA+ + +
Sbjct: 302 RSAKIRTYNFPQSRVTDHRIGFTSHALPQIMQGELDPLIEALRMHDQAERLQA 354


>gi|319901262|ref|YP_004160990.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           helcogenes P 36-108]
 gi|319416293|gb|ADV43404.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           helcogenes P 36-108]
          Length = 370

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 149/362 (41%), Positives = 227/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  +++    Y Q     ++  
Sbjct: 9   EKLEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLNGIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I  + +D E+RD+A+ E+   +    ELE +I  LL+P D  D ++ ILEIR GTGG 
Sbjct: 69  EIIT-NEADPEMRDMAREELDLCQARQPELEEQIKLLLVPTDPQDSRNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++  ++ WK+EV S+++   GG+KEI+ +++G GV+  MK+ESGVH
Sbjct: 128 EAAIFAGDLFRMYSKFCDIKGWKLEVSSANEGAAGGFKEIICSVTGDGVYGTMKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKD 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|315222986|ref|ZP_07864865.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
 gi|315187936|gb|EFU21672.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
          Length = 359

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 237/358 (66%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYREYKRVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA+LF GDL  MY++YA  + WK EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+I++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEELN 358


>gi|145588324|ref|YP_001154921.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189039983|sp|A4SV43|RF1_POLSQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145046730|gb|ABP33357.1| bacterial peptide chain release factor 1 (bRF-1) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 359

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 176/362 (48%), Positives = 243/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   ++       +DAY KLT E++ I+ ++ +  +Y + + 
Sbjct: 1   MKPSMRAKLDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFGLYKKAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q    +      D E++D A  E    +  + ELE  +  LLLPKD +D+++  LEIR
Sbjct: 61  DAQAAEEMRK----DPEMKDFADEEQKQAQATMEELEGALQKLLLPKDVNDERNVFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+A  + WKVEV++++++D GGYKE+V  + G+ V+SR+K
Sbjct: 117 AGTGGDESALFAGDLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRLVGQSVYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAV+PEA E   V I   ++RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPQTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    ++SQH+NR +AMKVL +R+ D   +      +  RK 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGRITDHRINLTLYK++ ++ G IDD+ N L + HQA+++ + 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRITDHRINLTLYKIDAMMDGDIDDLCNALASEHQAELLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|319939134|ref|ZP_08013498.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
 gi|319812184|gb|EFW08450.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
          Length = 359

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 237/358 (66%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYRDYKRVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA+LF GDL  MY++YA  + WK EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+I++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEELN 358


>gi|255020676|ref|ZP_05292738.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
           51756]
 gi|254969912|gb|EET27412.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
           51756]
          Length = 365

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 176/363 (48%), Positives = 244/363 (67%), Gaps = 8/363 (2%)

Query: 1   MVFLS--HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQK 55
           M        Q+  L  R  E++  ++    V     +   + E   I PI+  +  ++++
Sbjct: 1   MSLSPRLEAQLEQLAERAEELQKALASPEIVQDNARFQAFSRELGEIQPILELLQAHEEQ 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           +Q   +   ++     D E+R LA+ +    E E+  +E  +   LLP+D +D+++  LE
Sbjct: 61  RQRWDEARELL-LAERDPELRALAEEDQREAEAELARIEESLQVRLLPRDPNDERNVFLE 119

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           IRAGTGG EAALF  DL RMY RYA  R + V VLSS++++ GGYKEIV  ISGRG +SR
Sbjct: 120 IRAGTGGEEAALFAADLARMYTRYAEGRGFGVTVLSSTESERGGYKEIVLEISGRGAYSR 179

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGG 234
           +KFESG HRVQRVP TE+ GR+HTSA TVAVLPE     ++ I   D+RIDT RASG+GG
Sbjct: 180 LKFESGGHRVQRVPETESQGRIHTSACTVAVLPEVDAVHEIHIQPSDLRIDTYRASGAGG 239

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVN TDSA+RITH+PTG++V    ++SQH+NR RAM +L+ARL ++ R++  +  +A R
Sbjct: 240 QHVNKTDSAIRITHLPTGLVVACQEDRSQHKNRARAMALLQARLLEMVREQQESSTAATR 299

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +  IGSGDRSERIRTYNF QGRITDHRINLT+Y+LE VL G +D +I+PL+  HQA+++ 
Sbjct: 300 RSLIGSGDRSERIRTYNFPQGRITDHRINLTIYRLEAVLAGELDALIDPLIREHQAELLA 359

Query: 354 SAS 356
            ++
Sbjct: 360 QSA 362


>gi|258512739|ref|YP_003186173.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479465|gb|ACV59784.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 356

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 231/350 (66%), Gaps = 5/350 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+  +   +          KL    +E A ++  +     + +  Q   +  
Sbjct: 3   DRLASMEERYEHLSQLLCRPDVASDPEKLRSYAKEQAELAETVEVYREWKKVSQNIDEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+R+  + E+  +++    LE+ +  LLLPKD +DDK   +EIRA  GG 
Sbjct: 63  AMLQDKLDD-EMREFVRAELAELQRRREGLEHRLKILLLPKDPNDDKDVFVEIRAAAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L RMY+RYA    WK E++ +S  D GG++E+V  + G+G ++++KFESG H
Sbjct: 122 EAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAVHGKGAYAKLKFESGTH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  E++V+I  +D+RIDT  ++G GGQ VNTT SA
Sbjct: 182 RVQRVPVTESGGRIHTSTATVAVLPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    EKSQ +N+ +AM+VLRARLY+  ++    E +A R+LQ+G+GDR
Sbjct: 242 VRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLYEKAQREQQEELAAKRRLQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           SERIRTYNF Q R+TDHRI LTL+KL+ VL G +D+II  L+   QA+M+
Sbjct: 302 SERIRTYNFPQSRVTDHRIGLTLHKLDAVLDGELDEIIQALIVESQAEML 351


>gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4]
 gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7]
 gi|119361605|sp|Q0HFC8|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361606|sp|Q0HYK8|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           MR-4]
 gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           MR-7]
          Length = 363

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 160/362 (44%), Positives = 242/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +     +  L++EY+ +  +++    Y Q   
Sbjct: 1   MKESVIRKLEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQALA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D+E+R++AQ E+ A + E+  LE E+  LLLPKD +DD +  +EIR
Sbjct: 61  DLESAKEML--EEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++E++SS++ + GG+KEI+  +SG G + ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV V+ E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA ++ + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQADLLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|193211744|ref|YP_001997697.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
 gi|238692678|sp|B3QRH7|RF1_CHLP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193085221|gb|ACF10497.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
          Length = 357

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 225/353 (63%), Gaps = 6/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +K+++  IE ++S+       + + KL +EY+ +  I+     +   KQ+  +  
Sbjct: 3   DKLQSIKDKYLTIEQQLSDPEVAADQNRFRKLNKEYSGLREIVRAYDNWRSAKQQLDETL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +      D E+R LA  E   +++ + ELE  +  LLLPKD  D ++ I+EIRAGTGG 
Sbjct: 63  AMQKSEE-DPEMRALAAAEAEELQERLPELEQNLKILLLPKDEADTRNAIIEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGRGVFSRMKFESGV 182
           EA LF  DL RMY+RYA  + W  + L  S+    G  KE+   +SG  V+  +KFESGV
Sbjct: 122 EAGLFAADLMRMYQRYAERQGWSCQTLDVSEGSVPGSLKEVSLEVSGHDVYGILKFESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAA+VAVLPEA E+DV+I  +D+++DT R+ G GGQ+VN  ++
Sbjct: 182 HRVQRVPETETQGRIHTSAASVAVLPEAEEVDVEIRKDDLQMDTFRSGGKGGQNVNKVET 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+P+GI+V    E+SQ QNR RAMK+LR++LYD++       R+  R+  + +GD
Sbjct: 242 AVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKITEQLQSRADLRRSMVATGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RS +IRTYNF Q R+TDHRI  T + L  V+QG ++ II+ L    QA+ + +
Sbjct: 302 RSAKIRTYNFPQSRVTDHRIGFTTHALPQVMQGELEPIIDALRMHDQAERLKA 354


>gi|78358024|ref|YP_389473.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|119361534|sp|Q30X18|RF1_DESDG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78220429|gb|ABB39778.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 357

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 180/353 (50%), Positives = 247/353 (69%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ +F ++E ++S        + Y KLT+ ++ +  I+    +Y Q  +E      
Sbjct: 4   KLEHLERQFEDLEQQLSSPEVFGDQERYRKLTKAHSDLKEIVEVFRVYRQLNEELAGNKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D  SD EI+ +A+ E+ AIEK + E+E+E+  LLLPKD  D+K+ +LEIRAGTGG E
Sbjct: 64  MLRD--SDPEIQAMAREEIDAIEKRLPEMEHELKLLLLPKDPLDEKNVVLEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY RYA    W+VEVLSSS+ D GG+KEI+  ISG  V+SRMKFESG HR
Sbjct: 122 AALFAADLFRMYLRYAEDMGWRVEVLSSSETDSGGFKEIIGLISGDKVYSRMKFESGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GR+HTSAATVAV+PEA E+++D+  ED+R D  R+SG GGQ VNTTDSAV
Sbjct: 182 VQRVPATETQGRIHTSAATVAVMPEADEVELDMKPEDLRFDVYRSSGPGGQSVNTTDSAV 241

Query: 245 RITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG  +    EKSQH+N+ + +K+L +RL   +  +   E +  R+  +G+GDRS
Sbjct: 242 RVTHIPTGITVACQDEKSQHKNKAKGLKILASRLLQAQEDKRHEELAEQRRSLVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            RIRTYNF QGRITDHRINLTLYKL+  ++G I D+++ L+T  Q + + + +
Sbjct: 302 GRIRTYNFPQGRITDHRINLTLYKLDAFMEGQIGDMLDALITHAQTEALKAQA 354


>gi|325105445|ref|YP_004275099.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
           saltans DSM 12145]
 gi|324974293|gb|ADY53277.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
           saltans DSM 12145]
          Length = 358

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 153/356 (42%), Positives = 226/356 (63%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K R  ++E  +S       +  + +L +EY  +  I+ +   Y         
Sbjct: 1   MLDKLEAIKLRRDDVERELSNPEATQDMKRFAQLNKEYKDLGLIVDEYYKYKNVVSNIAT 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++  +  D E+R++A+ E+  +  E  E+E +I  +L+PKD  D+K  I+EIR GTG
Sbjct: 61  NKDILA-NEKDQELREMAKEELDVLIPEKEEMEAKIRLMLVPKDPGDEKDAIVEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDL+RMY RY   + W+ EVL  +D  +GGYKE+V  +SG  V+  +K+ESG
Sbjct: 120 GDEAAIFAGDLYRMYTRYCEGKGWRTEVLEVTDGTNGGYKEVVFKVSGEDVYGTLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAA+VAVLPEA E+DV+I   DI + T R+ G+GGQ+VN  +
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           + V++TH PTGI+V    E+SQ  NR RAM++LR++LY+ E  +   E ++ RK  + +G
Sbjct: 240 TKVQLTHKPTGIVVVCQVERSQLGNRERAMEMLRSKLYERELAKYNEEIASKRKTMVSTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS +IRTYN+ QGR+T+HRI LTLY L  V+ G I +I++ L  A  A+ +   +
Sbjct: 300 DRSAKIRTYNYPQGRVTEHRIGLTLYNLPAVMNGEIQEILDALQFAENAEKLKEGA 355


>gi|88803826|ref|ZP_01119349.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
 gi|88780354|gb|EAR11536.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
          Length = 358

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 153/357 (42%), Positives = 229/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              +I  +K R+ E+   + +  ++     Y +L +EY  +  ++ K   Y       ++
Sbjct: 1   MLDKIRIVKQRYDEVSDLIIQPATIMDQKRYAQLMKEYKDLGNVVEKGDEYQALIDNIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD+E+ ++A+ E+      I +LE EI +LL+P D +D K+ ++E+RAGTG
Sbjct: 61  AKEILAE-GSDAEMNEMAKSEIDEANSRIPKLEEEIRFLLIPTDPEDSKNAVVELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y   + WKV  +  S+  +GG+KEI   ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYSKYCESKGWKVATVDYSEGTNGGFKEIQFEVNGADVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAAT  V PEA E DV+I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATCMVFPEAEEFDVEINPKDVRIDFFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++     +KSQH+N+ +A KVLR+RLYD+E  +   E +  R   + SG
Sbjct: 240 SAVRLTHVPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKNAEDALKRGSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN++QGR+TDHRI L+LY L  ++ G I  +I+ L+ A   + + S ++
Sbjct: 300 DRSAKIRTYNYAQGRVTDHRIGLSLYDLPNIMNGDIQRVIDELMLAENTEKLKSLND 356


>gi|304410657|ref|ZP_07392275.1| peptide chain release factor 1 [Shewanella baltica OS183]
 gi|304351141|gb|EFM15541.1| peptide chain release factor 1 [Shewanella baltica OS183]
          Length = 363

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 162/362 (44%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +   D +  L++EYA +  +++    Y Q + 
Sbjct: 1   MKESVIRKLEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQV 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D+E+R++AQ E+ A + ++  LE+E+  LLLPKD DDDK+  +EIR
Sbjct: 61  DLDSAKEML--EEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++E++S ++ + GG+KE++  +SG GV+ ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VL E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  +E ++  +     R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEETTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA  + + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILLPLMQEHQADQLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|293395774|ref|ZP_06640056.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
 gi|291421711|gb|EFE94958.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
          Length = 361

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E++  + ++  +   D +  L+ EYA ++ +      + Q + +      
Sbjct: 8   KLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSRCFLEWRQVQDDVATAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+    +    LE ++  LLLPKD DD++SC LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELKQARETTETLEQQLQLLLLPKDPDDERSCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VEV+S+++ + GGYKE++A +SG GV+ ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAEARRWRVEVMSANEGEHGGYKEVIAKVSGDGVYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + S
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLAALS 357


>gi|157964580|ref|YP_001499404.1| peptide chain release factor 1 [Rickettsia massiliae MTU5]
 gi|166977368|sp|A8F1S1|RF1_RICM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157844356|gb|ABV84857.1| Peptide chain release factor RF-1 [Rickettsia massiliae MTU5]
          Length = 361

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 176/352 (50%), Positives = 250/352 (71%), Gaps = 2/352 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 1   MRFSDNLAKILDKYENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIQIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ +R+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMI 352
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ +  L+   +AK +
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIADDEAKKL 352


>gi|241116888|ref|XP_002401657.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215493201|gb|EEC02842.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 358

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 248/354 (70%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 4   MSFSDNLAKILDKYENLGKKLSSGIMGDEFVKASKEYAELKDVVAKIKEYNKAKSELEEA 63

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 64  NNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 123

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A I G+ VFS++KFESGV
Sbjct: 124 EEAALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGV 183

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D++IDT RASG+GGQHVNTTDS
Sbjct: 184 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLKIDTYRASGAGGQHVNTTDS 243

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPT I V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ +R+ Q+GSGD
Sbjct: 244 AVRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGD 303

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ +  L+   +AK +  
Sbjct: 304 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIADDEAKKLSE 357


>gi|313676496|ref|YP_004054492.1| bacterial peptide chain release factor 1 (brf-1) [Marivirga
           tractuosa DSM 4126]
 gi|312943194|gb|ADR22384.1| bacterial peptide chain release factor 1 (bRF-1) [Marivirga
           tractuosa DSM 4126]
          Length = 355

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 151/354 (42%), Positives = 230/354 (64%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+   M +      +  + +L++EYA +  ++     Y +   + + 
Sbjct: 1   MLDRLERMKERFQEVGQLMVQPDAMADMKKFTELSKEYADLEKVVEVYDAYTKVLDDIKQ 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ ++  + E R++A++E   ++ E   LE E+  +L+PKD +D K+ +LEIRAGTG
Sbjct: 61  AKNIL-ENEKEPEFREMAKMEWEELKPERDRLEEELKKMLIPKDPNDSKNAVLEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDLF+MY+R+       + VL  +    GGYKEI++T++G+  +  +K+ESG
Sbjct: 120 GDEAAIFAGDLFKMYQRFCDKNGLNLTVLDLTFGTAGGYKEIISTVTGKNAYGTLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPE  +++V+I + D+R DT  +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVAVLPEIDDVEVEIDMNDVRKDTYCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTG++V    +KSQ +N  +A++VLR+RLY++E  +   E  A R+  + SG
Sbjct: 240 SAVRLTHEPTGLVVTCQDQKSQIKNFDKALRVLRSRLYEIELAKQNEEVGAQRRSIVRSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRS++IRTYN+ QGR+TDHRIN T++ L  ++ G I+D+I  L  A  A  +  
Sbjct: 300 DRSDKIRTYNYPQGRVTDHRINYTVHNLPNIMNGEIEDLIENLQIAENASKLDE 353


>gi|306825267|ref|ZP_07458609.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432703|gb|EFM35677.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG  V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGHSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|258645288|ref|ZP_05732757.1| peptide chain release factor 1 [Dialister invisus DSM 15470]
 gi|260402638|gb|EEW96185.1| peptide chain release factor 1 [Dialister invisus DSM 15470]
          Length = 360

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 248/353 (70%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++ RF  +E ++S+   +   + +  L++E++ +  I++    Y +  +  ++   
Sbjct: 5   KLDAMEARFRSLEDQLSDPSVISNQNKWRTLSKEHSDLGEIVTLYRSYKKVDKTCKEAVN 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D  S S++ +LA+ E+   EK   EL+ +I++LL+PKD +D K+ ILEIRAGTGG E
Sbjct: 65  ILEDK-SQSDLHELAKEELKEAEKMKNELDKQIHFLLIPKDPNDGKNVILEIRAGTGGEE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DL +MY ++A  + W+VE+  +++ D GG++E+   I G+  +S +KFESGVHR
Sbjct: 124 AALFAADLLKMYLKFAENKGWRVELADANETDLGGFREVTCIIYGKNAYSLLKFESGVHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+PATE+ GRVHTSA TVAVLPE   +D+DI  +D+RID  RASG+GGQH+N T SA+
Sbjct: 184 VQRIPATESQGRVHTSAVTVAVLPEVENVDIDINRDDLRIDVYRASGAGGQHINKTSSAI 243

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIP+G++V   +E+SQ QN+ +A+++L+ARLYD   +   ++ +A+RK Q+GSGDRS
Sbjct: 244 RITHIPSGMVVTCQNERSQRQNKEKALQILKARLYDRAVRESQDKTAADRKGQVGSGDRS 303

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF QGR+TDHR+N+++Y+L+  L G +D I++ L+ A   K +    
Sbjct: 304 ERIRTYNFPQGRVTDHRVNVSVYQLDNFLNGNMDGILDVLIEADLTKRMKEGE 356


>gi|296533064|ref|ZP_06895708.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
 gi|296266608|gb|EFH12589.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
          Length = 351

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 234/355 (65%), Gaps = 6/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
               +++  L  R  E+   +  +        L +E + + P+++++      ++   + 
Sbjct: 1   MKLPEKLDRLLYRADELRALLETAEG-AQVGALAKELSELEPLVAQVEALRAAERARDEA 59

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R+LA+ E  A    +  LE E+  +LLPKD  D  S ILEIR   GG
Sbjct: 60  EALLA----DPEMRELAEAEYYAQRDAVPVLERELRLMLLPKDAADAGSAILEIRPAAGG 115

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA LF  +LF  Y++YAA R W+  VL   +++ GG K  VA + G+GVF+R+KFESGV
Sbjct: 116 DEAGLFAAELFAAYQKYAAARGWRFGVLDYDESELGGIKGAVAEVEGQGVFARLKFESGV 175

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE  GR+HTS  TVAVLP+A ++DV I   D+RIDT RASG+GGQHVN TDS
Sbjct: 176 HRVQRVPATETQGRIHTSTVTVAVLPQAEDVDVQINESDLRIDTYRASGAGGQHVNKTDS 235

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTG +V    E+SQH+NR +AMKVLRARLY+ +R +    RSA+R+ Q+G+GD
Sbjct: 236 AVRITHIPTGTVVAMQEERSQHKNRAKAMKVLRARLYEAQRSQAVASRSADRRAQVGTGD 295

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRI LTL+K++ V+QG +DDII+ L+   +A  + +  
Sbjct: 296 RSERIRTYNFPQGRVTDHRIGLTLHKIDRVMQGEMDDIIDALIAEDEAARLAAEG 350


>gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87]
 gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87]
          Length = 358

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 249/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E +D+ 
Sbjct: 3   DQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELEDIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E  D+ + E  +++ E+ E+E E+  LL+PKD +D+K  I+EIRA  GG 
Sbjct: 63  EMLKET-SDKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA    +K E++ +S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ER+RTYN+ Q R+TDHRI LTL KL  +++G +D+II+ L  + Q + +   +
Sbjct: 302 ERVRTYNYPQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQTEKLKELN 354


>gi|253990004|ref|YP_003041360.1| peptide chain release factor 1 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781454|emb|CAQ84617.1| peptide chain release factor rf-1 [Photorhabdus asymbiotica]
          Length = 360

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 245/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+   + ++  +     +  L+ EYA ++ + +    +   + + +    
Sbjct: 8   KLEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTTCFKTWRTVQDDLKAAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEEIKDAKARNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+WK+EV+S++D + GGYKEI+A +SG  V+  +KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWKIEVMSANDGEHGGYKEIIAKVSGEQVYGHLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAVLPE  E +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVLPEIPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+  +GSGDR
Sbjct: 244 IRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQEAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVNEYQADQLSALSE 358


>gi|239947714|ref|ZP_04699467.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921990|gb|EER22014.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 355

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 248/354 (70%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 1   MSFSDNLAKILDKYENLGKKLSSGIMGDEFVKASKEYAELKDVVAKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D++IDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLKIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPT I V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ +R+ Q+GSGD
Sbjct: 241 AVRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ +  L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIADDEAKKLSE 354


>gi|308271577|emb|CBX28185.1| Peptide chain release factor 1 [uncultured Desulfobacterium sp.]
          Length = 363

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 189/360 (52%), Positives = 253/360 (70%), Gaps = 6/360 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M  +  ++I   + RF E+E+ +S+  ++   +AY K   E++A+S I++    Y    +
Sbjct: 1   MEGIMFEKIEGAEVRFMELEMLLSDPDTIRDREAYQKYVREHSALSKIVAIYRSYKNINE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++  +++   N D EI++LA+ E+  +  +  +LE ++  LL+PKD  D+K+ ILEIR
Sbjct: 61  QIEESISLLK--NEDPEIKELARDEIEELNLKKEDLEKQLRLLLIPKDEKDEKNVILEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  DLFRMY RYA  R WKVEVL+ S    GG KEIVA I G+G +S  K
Sbjct: 119 AGTGGDEAALFATDLFRMYSRYAENRNWKVEVLTHSPTGVGGLKEIVALIQGKGAYSSFK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESG HRVQRVP TEA GR+HTSA TVAVLPEA E+++DI   +I++D  R++G GGQ V
Sbjct: 179 YESGTHRVQRVPVTEAQGRIHTSAVTVAVLPEAEEVELDIDPGEIKVDVYRSTGPGGQSV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTG++V    EKSQ +N+ +AMKVLRARL D        +RSA RK Q
Sbjct: 239 NTTDSAVRITHLPTGLVVTCQDEKSQFKNKSKAMKVLRARLLDNITMEQNQKRSAERKHQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           IGSGDRSERIRTYNF Q R+TDHRI LTLYKLEY+L+G ID+II+ L + +QA+ +  A 
Sbjct: 299 IGSGDRSERIRTYNFPQSRVTDHRIGLTLYKLEYILEGNIDEIISELTSHYQAQALQHAE 358


>gi|262375291|ref|ZP_06068524.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
 gi|262309545|gb|EEY90675.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
          Length = 362

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 243/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   +++   +     + +L+ E+  ++ I +  + Y Q ++
Sbjct: 1   MKESLRLRLDQLSDRHEELTALLADVEVISDNKRFRQLSREHNDLTEITNVWTKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++    SD + +++AQ E+   +  I  LE ++N L++PKD +D  S  LEIR
Sbjct: 61  DIETAQAML----SDPDFKEMAQEEIKENKALIESLEADLNILMIPKDPNDANSAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++E+LS ++ + GGYKE++  I+G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAENQGWRIEILSENEGEHGGYKEVICLINGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   +  VDI   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTSVDINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 VNKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAVMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|332360425|gb|EGJ38236.1| peptide chain release factor RF1 [Streptococcus sanguinis SK355]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVAAYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKNAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|325929457|ref|ZP_08190585.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           perforans 91-118]
 gi|325540232|gb|EGD11846.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           perforans 91-118]
          Length = 361

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 169/363 (46%), Positives = 244/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+ A +  + +L+ ++  LL+P+D  DD +  LE+R
Sbjct: 61  DLATAEAL----RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +++       D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L D ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSKAAAAEAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQADELAR 356

Query: 355 ASE 357
            S+
Sbjct: 357 LSD 359


>gi|257421856|ref|ZP_05598846.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|257163680|gb|EEU93640.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|315155439|gb|EFT99455.1| peptide chain release factor 1 [Enterococcus faecalis TX0043]
          Length = 357

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 240/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   +     +++L++E A     +     Y Q  +   D  
Sbjct: 3   DQLQSIEDRYEELGELLSDPAIISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D+E+ ++A+ E+  ++KE   LE+ I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLSE-NLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++YA  + WK EVL ++    GGYKE++  ISG  VFS++K+ESG H
Sbjct: 122 EAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++++  +DIR+D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVEIELADKDIRVDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMKVLRAR+YD  ++   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L G +D+II+ L+   Q   +   
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEM 354


>gi|296116158|ref|ZP_06834776.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977264|gb|EFG84024.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 353

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 174/349 (49%), Positives = 246/349 (70%), Gaps = 5/349 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            +++  +  R  E++  ++E  S  A+ + + E+A + PI++K++     +Q  QD   +
Sbjct: 5   DERLDRIVARGEELQALLAEGLSGAAFSQASREFAELDPIVAKVNALRATEQAVQDTQAL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D E+R LA+ E+  + + I ELE++I   +LP+D  DD+S ILEIR   GG EA
Sbjct: 65  L----DDPEMRGLAESELAELRRRIPELEHDIRIAMLPRDEADDRSAILEIRPAAGGDEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF G +F  Y+RYA  R W+ E+L   +++ GG +E +A+I+GRGVF+R+K+ESGVHRV
Sbjct: 121 ALFAGQMFGAYQRYADQRGWRFEILEYDESELGGLREGIASITGRGVFARLKYESGVHRV 180

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVPATE+ GR+HTS  TVAVLPEA E+DV+I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 181 QRVPATESQGRIHTSTVTVAVLPEAEEVDVEINDNDLRIDVYRASGAGGQHVNKTESAVR 240

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH+P+GI+V    EKSQH+NR +AMK+LRARLY+  R      R+A+R+ Q+G+GDRSE
Sbjct: 241 ITHMPSGIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAHETRAADRRSQVGTGDRSE 300

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           RIRTYNF QGR+TDHRI LTLYK++ V+ G  D+ ++ L    QA ++ 
Sbjct: 301 RIRTYNFPQGRVTDHRIGLTLYKIDKVMGGEFDEFVDALTQEEQAALLA 349


>gi|238763000|ref|ZP_04623967.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
 gi|238698758|gb|EEP91508.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
          Length = 360

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIEAAEMMLE----DPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A +SG GVF ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|152989856|ref|YP_001355578.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
 gi|166223578|sp|A6Q162|RF1_NITSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151421717|dbj|BAF69221.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
          Length = 354

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 176/357 (49%), Positives = 245/357 (68%), Gaps = 8/357 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++     R+ EI   +S       +     L++E + I PI+ K   Y    +  +
Sbjct: 1   MLKEKLHPFIQRYNEINELLSSPEITQDIKKMTALSKEQSEIEPIVEKAKEYMNILEAIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +  ++I     D E+ +LA+ E+  +E +  +LE EI  LL+ KD +D+K   LEIRAGT
Sbjct: 61  ENRSLIE----DEELGELAKEELKELEPKKEQLEEEIKVLLISKDPNDEKDIYLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLF+ Y RYA  + W+VE++SSS++D GGYKEI+A I G+GV+SR+K+E+
Sbjct: 117 GGEEAALFASDLFKAYARYAEKKGWRVEIVSSSESDSGGYKEIIAKIKGQGVYSRLKYEA 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GR+HTSA TVA++PE  ++DV+I   D++ID  R+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRIHTSAVTVAIMPEVDDVDVEINPNDLKIDVYRSSGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+V    EKSQH+N+ +A+K+L+AR+++   +      + +RK Q+GS
Sbjct: 237 DSAVRITHIPTGIVVAMQDEKSQHKNKEKALKILKARIFEKRMREQQEALAKDRKEQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF Q R+TDHRI LTLYKLE V+QG +D II PL+  +QA+ I  A 
Sbjct: 297 GDRSERIRTYNFPQNRVTDHRIGLTLYKLEEVMQGDLDQIIEPLIAHYQAQKIQEAG 353


>gi|51596331|ref|YP_070522.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           32953]
 gi|81639458|sp|Q66AX5|RF1_YERPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51589613|emb|CAH21243.1| peptide chain release factor RF-1 [Yersinia pseudotuberculosis IP
           32953]
          Length = 360

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIEAAEMML----DDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A ISG GVF ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEVIAKISGDGVFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E +  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGTGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|322387784|ref|ZP_08061393.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
           700779]
 gi|321141651|gb|EFX37147.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
           700779]
          Length = 359

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|261366981|ref|ZP_05979864.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
           15176]
 gi|282571098|gb|EFB76633.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
           15176]
          Length = 359

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 153/359 (42%), Positives = 239/359 (66%), Gaps = 5/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
                Q+ +++ R+ E+  RMS   +    D Y ++ ++Y  ++P++ +   Y   +Q++
Sbjct: 1   MTEFLQLHEVERRYEELAYRMSAPDAAAQPDVYARMMKDYKELTPLVEEYRRYTSLQQQQ 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            + + ++    +D   + + Q E+  I + + + E  +  LLLPKD DD+K+ ILEIRAG
Sbjct: 61  TETNELVQQE-TDPAFKAMVQQELCEIARNLAQSEENLRLLLLPKDADDEKNVILEIRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF   L+RMY  YA+ R W  + +S+++ + GG KE+V ++ G  V+SR+KFE
Sbjct: 120 AGGEEAALFAHSLWRMYTMYASKRGWSCQTISANETELGGVKEVVFSVEGADVYSRLKFE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE  GR+HTS  TVAV+PEA E+++++  +D+RIDT R+SG+GGQH+N 
Sbjct: 180 SGVHRVQRVPETETQGRIHTSTVTVAVMPEAEEVELELDPKDLRIDTFRSSGAGGQHINK 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SA+R+TH+PTG++V    ++SQ +N+ RA+ VLR+RL   +++      +  R+ Q+G
Sbjct: 240 TSSAIRVTHLPTGMVVECQDQRSQRENKERALTVLRSRLLQQKQQAYDEAYNEKRQSQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +GDRSE+IRTYNF Q R+TDHRI LTL  L+ VL G +D ++ PL+ A + + +   SE
Sbjct: 300 TGDRSEKIRTYNFPQDRVTDHRIGLTLRNLQGVLDGDLDRVLEPLILADREEKLKQHSE 358


>gi|239637411|ref|ZP_04678393.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
 gi|239597011|gb|EEQ79526.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
          Length = 358

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 247/353 (69%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  D+ 
Sbjct: 3   DQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELADIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E  ++ + E  +++ E+ E+E ++  LL+PKD +D+K  I+EIRA  GG 
Sbjct: 63  EMLNET-SDKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA    +K E++ +S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAEAHNFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +L+G +D+II+ L  + Q   +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLSQILEGNLDEIIDALTLSEQTDKLKELN 354


>gi|148543687|ref|YP_001271057.1| peptide chain release factor 1 [Lactobacillus reuteri DSM 20016]
 gi|227363334|ref|ZP_03847463.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
 gi|227544508|ref|ZP_03974557.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
 gi|300909304|ref|ZP_07126765.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
 gi|325682058|ref|ZP_08161576.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
 gi|148530721|gb|ABQ82720.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           reuteri DSM 20016]
 gi|227071641|gb|EEI09935.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
 gi|227185531|gb|EEI65602.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
 gi|300893169|gb|EFK86528.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
 gi|324978702|gb|EGC15651.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
          Length = 362

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 237/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E  ++   + K + Y +  Q   D  
Sbjct: 8   DKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQTISDDE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D ++  L + E+    +E  +LE E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 68  ELLRETNDD-DLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+ MY RYA  + WKVEV+  ++ + GG+KEI   I+G  V+S++KFE+G H
Sbjct: 127 EASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENGAH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PEA ++DVDI  +DIR+D  R+SG+GGQHVN T SA
Sbjct: 187 RVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 246

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L++R+YD  +++  +     RK  IG+GDR
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQQEQSAYDQKRKDAIGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II  L+ A Q + +   
Sbjct: 307 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQTQKLEQL 359


>gi|116749148|ref|YP_845835.1| peptide chain release factor 1 [Syntrophobacter fumaroxidans MPOB]
 gi|166977370|sp|A0LIZ8|RF1_SYNFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116698212|gb|ABK17400.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 355

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 178/350 (50%), Positives = 248/350 (70%), Gaps = 5/350 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +  +F ++E  +S      +   Y K+  E+A I+PI+    +Y    ++  D  
Sbjct: 3   DRLESVAQKFRKLEEDLSNPELLANQKEYQKIAREHAEIAPIVEAYGLYKGLHRQLLDNQ 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D E+R+L + E+  ++++I + EN +  +L P+D +DDK+ ILEIRAGTGG 
Sbjct: 63  QLL-EQETDPEMRELFRQEIAELKRQIEDTENGLKLMLAPRDPNDDKNVILEIRAGTGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFV DLFRMY RYA LR+WKVE+L S     GG KE++A ++G+G +SR+KFE GVH
Sbjct: 122 EAALFVSDLFRMYTRYAELRRWKVEILDSHQTGIGGLKEVIAAVNGQGAYSRLKFERGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTSA TVAVLPEA E+DV I   D+R+D  R+SG GGQ VNTTDSA
Sbjct: 182 RVQRVPVTESQGRIHTSAVTVAVLPEAEEVDVYIDPNDLRVDVFRSSGPGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIP+G++V    EKSQH+N+ +A+KVLRARL D  +       + +RK Q+G+GDR
Sbjct: 242 VRVTHIPSGLVVICQDEKSQHKNKAKALKVLRARLLDQMQSEQEARIARDRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           SERIRTYNF Q R++DHRINLTLYKL+ +L G +D+II+PL T  QA+ +
Sbjct: 302 SERIRTYNFPQNRVSDHRINLTLYKLDIILGGALDEIIDPLSTHFQAEAL 351


>gi|332701398|ref|ZP_08421486.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332551547|gb|EGJ48591.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 357

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 176/353 (49%), Positives = 248/353 (70%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ +FA++E ++S     +    Y KLT+  A ++ +++    + +  ++ +D   
Sbjct: 4   KLESLERQFADLESQLSAPDIFNDQERYKKLTKARADLAQVVACFQEFKKLSRDLEDNRE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D EIR +A+ E+ +I++ +  LE ++  LLLPKD  D+K  ILEIRAGTGG E
Sbjct: 64  MLADA--DPEIRAMAESEIASIKQALPRLEEKLQLLLLPKDPLDEKDVILEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF  DLFRMY RYA    WKVE+LS  ++  GG+KE++A+ISG  V+SR+K+ESG+HR
Sbjct: 122 ASLFAADLFRMYMRYAERVGWKVEMLSEHESATGGFKEVIASISGERVYSRLKYESGIHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GR+HTSA TVAVLPEA E+D+DI   ++RID  RASG+GGQHVN T+SAV
Sbjct: 182 VQRVPATETQGRIHTSAVTVAVLPEAEEVDLDIDPTELRIDVYRASGAGGQHVNKTESAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PT  +V    EKSQH+N+ +AMKVLR+R+    +    +E  A R+L +GSGDRS
Sbjct: 242 RITHLPTNTVVTCQDEKSQHKNKAKAMKVLRSRILQSMQAARKDEEDAARRLLVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            RIRTYNF QGRITDHRINLTLY L  V++G +DD++  L+  +Q + +   +
Sbjct: 302 GRIRTYNFPQGRITDHRINLTLYSLSAVMEGALDDLVEALIGHYQTEALKQQA 354


>gi|270292697|ref|ZP_06198908.1| peptide chain release factor 1 [Streptococcus sp. M143]
 gi|270278676|gb|EFA24522.1| peptide chain release factor 1 [Streptococcus sp. M143]
          Length = 359

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  IDAEEMIKESGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
           27405]
 gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|166223552|sp|A3DIL4|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125715301|gb|ABN53793.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium
           thermocellum ATCC 27405]
 gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
          Length = 360

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 182/355 (51%), Positives = 257/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           ++    +NR+ EI  R+S+   +   D Y KL +E+A +  +++K + Y +  +E  D  
Sbjct: 3   EKFQAAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIADAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E R++ + E+   ++++  L+ E+  LLLPKD +D+++ I+EIR G GG 
Sbjct: 63  EMLNEK-LDKEFREMVETELKEAQEKLEVLKKEMKILLLPKDPNDERNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY RYA    WK E+L S+  + GG+KE+V +I G G +SR+KFESGVH
Sbjct: 122 EAALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA+GRVHTS  TVAVLPEA EIDV+I   D+RIDT RASG+GGQH+N TDSA
Sbjct: 182 RVQRVPVTEANGRVHTSTVTVAVLPEAEEIDVEINPNDLRIDTYRASGAGGQHINKTDSA 241

Query: 244 VRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTG++V    ++SQH+N+ +AMKVLR++LY++ R++  NE +  RK Q+G+GDR
Sbjct: 242 IRITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEMAREQQHNEIAQERKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGR+TDHRI LTLYK++ +L G ID+II+ L+T  QA  + + +E
Sbjct: 302 SERIRTYNFPQGRVTDHRIGLTLYKIDDILDGDIDEIIDALITTDQASKLANGAE 356


>gi|163815255|ref|ZP_02206632.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
 gi|158449450|gb|EDP26445.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
          Length = 358

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 251/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ +L ++   I  ++++   V   + + KL +E + + PI+ K   Y   K   +D  
Sbjct: 3   DRLEELVDKLDTINNQLTDPDVVTDQNKFRKLMKEQSDLVPIVDKYKEYKDAKTTIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             I +  +D E+R++A+ E+   +  +  +E E+  LLLPKD +D K+ I+EIRAG GG 
Sbjct: 63  E-ILEEENDEELREMAKEEMNDAKSRLETIEQELKILLLPKDPNDSKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY++Y    KWKVE++S ++N  GG+KE V  I+G G +S+MK+ESGVH
Sbjct: 122 EAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GR+HTS  TVAV+PEA E+DV+I   DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPKTESGGRIHTSTVTVAVMPEAEEVDVEINDNDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++ + +EKSQ QN+ +A  +LR++LYD+E ++  +  +A+RK QIG+GDR
Sbjct: 242 VRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRKSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF +GR+TDHRI LTLYKL+ ++ G ++++I+ L+ A Q   +   +E
Sbjct: 302 SEKIRTYNFPEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQTAKLAQVNE 356


>gi|268316168|ref|YP_003289887.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252]
 gi|262333702|gb|ACY47499.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252]
          Length = 360

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 168/359 (46%), Positives = 243/359 (67%), Gaps = 7/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEE 59
            +  + + ++K R+ E+   +S+           +L  E+A++  ++  I  Y++   E+
Sbjct: 1   MIPKEPLEEIKRRYEEVTQALSDPEVAADPKRLAELGREHASLRAVVEAIEAYERLLAEQ 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + L  +I    SD E+  +A+ E+  +E+ +  +E ++   L+P+D  D ++ I+EIRAG
Sbjct: 61  ESLRELIR-TESDPELIRMARHELEELEERLPAVEEDLRLRLIPQDEMDRRNAIVEIRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY R+A  + WK+EVL +S    GG+KEI+ ++ G  V+  MK+E
Sbjct: 120 TGGDEAALFAGDLFRMYSRFAERKGWKLEVLDASPGTVGGFKEIIFSLKGPDVYGTMKYE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVPATE+ GR+HTSAA+V VLPEA E+DV+I  ED+RID  RASG GGQHVN 
Sbjct: 180 SGVHRVQRVPATESQGRIHTSAASVVVLPEAEEVDVEIRPEDLRIDVFRASGPGGQHVNR 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRITH+PTGI+V    EKSQHQNR +A+++LRARLY++E++R   ER A R+  I 
Sbjct: 240 TESAVRITHVPTGIVVACQDEKSQHQNREKALRILRARLYELEQERQRAERDAVRRASIK 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYK--LEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +GDRS +IRTYNF Q R+TDHR+   L    L  +++G +D++IN L TA  A+ +   
Sbjct: 300 TGDRSAKIRTYNFPQDRVTDHRLEGDLKNWPLHRIIEGELDELINALRTAEHAERLAQL 358


>gi|328946334|gb|EGG40478.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1087]
 gi|332361225|gb|EGJ39029.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1056]
          Length = 359

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTNRFMELSKEEASTRDTVTAYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|306829484|ref|ZP_07462674.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
 gi|307708639|ref|ZP_07645102.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
 gi|315613125|ref|ZP_07888035.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
           49296]
 gi|322376710|ref|ZP_08051203.1| peptide chain release factor 1 [Streptococcus sp. M334]
 gi|304428570|gb|EFM31660.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
 gi|307615213|gb|EFN94423.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
 gi|315314687|gb|EFU62729.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
           49296]
 gi|321282517|gb|EFX59524.1| peptide chain release factor 1 [Streptococcus sp. M334]
          Length = 359

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|289450407|ref|YP_003475653.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184954|gb|ADC91379.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 366

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 241/354 (68%), Gaps = 5/354 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   Q+  + NR+ E+   +S+   +   D Y+++ +E A ++ I+  I  Y  KK E  
Sbjct: 1   MEISQLEAVLNRYEELSAGLSDPSLLADRDRYLRVVKEQAGLTEIVGVIRDYIAKKDELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++ +   D E+R L + E+  ++ ++ ELE ++  LLLPKD  D+K+  LEIR G 
Sbjct: 61  ENLAMLQET-DDEEMRLLLKEEIRDLKVKLPELEEKLQILLLPKDPRDEKNVYLEIRGGA 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF   LFRMY+ YA  + +KVE++  +  + GG KE+V +I G G +S  K+ES
Sbjct: 120 GGEEAALFAEVLFRMYQSYAESKHFKVEIVEWNATELGGLKEVVCSIQGSGAYSLFKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTS  TVAVLPE  E+DV+I   DI IDT R+SG+GGQHVN T
Sbjct: 180 GVHRVQRVPVTESGGRIHTSTVTVAVLPEVDEVDVEILPGDITIDTYRSSGAGGQHVNKT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSA+RITHIPTGI+V    ++SQ++N+ RAM VLRA+LY+  ++  A   +  R+ Q+G+
Sbjct: 240 DSAIRITHIPTGIVVTCQDQRSQYKNKDRAMAVLRAKLYERAQEERAGSIAEARRDQVGT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           GDRSERIRTYN+ QGR+TDHRI LT+YK++ +L G +D II PL+ A + K++ 
Sbjct: 300 GDRSERIRTYNYPQGRVTDHRIGLTVYKIDEILAGNLDLIIEPLMRAERTKLLA 353


>gi|255693621|ref|ZP_05417296.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565]
 gi|260620597|gb|EEX43468.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565]
          Length = 370

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 149/362 (41%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF EI   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    SD++IR++A+ E+   ++ +  LE EI  +L+P D  D K+ ILEIR G GG 
Sbjct: 69  NILA-TESDTDIREMAKEEMDLSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y  ++ WK+EV ++++   GGYKEIV +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYAKYCEVKGWKLEVSNANEGTAGGYKEIVCSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +I            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYIWKNPNTGVSEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|309800291|ref|ZP_07694464.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
 gi|308116075|gb|EFO53578.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
          Length = 359

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  IDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|332360650|gb|EGJ38459.1| peptide chain release factor RF1 [Streptococcus sanguinis SK49]
          Length = 359

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3]
 gi|166223605|sp|A0KT88|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           ANA-3]
          Length = 363

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 160/362 (44%), Positives = 243/362 (67%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   + ++  +     +  L++EY+ +  +++    Y Q + 
Sbjct: 1   MKESVIRKLEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQAQA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D+E+R++AQ E+ A + E+  LE E+  LLLPKD +DD +  +EIR
Sbjct: 61  DLESAKEML--EEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA   +W++E++SS++ + GG+KEI+  +SG G + ++K
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV V+ E  E +       D+++DT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V    ++SQH+NR +AM VL AR+  VE ++  +   + R+ 
Sbjct: 239 VNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSER+RTYNF QGR+++HRINLTLY+L  V++G +D I+ PL+  HQA ++ + 
Sbjct: 299 LVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQADLLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|15892685|ref|NP_360399.1| peptide chain release factor 1 [Rickettsia conorii str. Malish 7]
 gi|20139335|sp|Q92HK9|RF1_RICCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15619858|gb|AAL03300.1| peptide chain release factor RF-1 [Rickettsia conorii str. Malish
           7]
          Length = 355

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 176/354 (49%), Positives = 249/354 (70%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 1   MRFSDNLAKILDKYENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W  E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWHFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ +R+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ +  L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIADDEAKKLLE 354


>gi|323351595|ref|ZP_08087249.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66]
 gi|322122081|gb|EFX93807.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66]
 gi|324992933|gb|EGC24853.1| peptide chain release factor RF1 [Streptococcus sanguinis SK405]
 gi|325687437|gb|EGD29458.1| peptide chain release factor RF1 [Streptococcus sanguinis SK72]
 gi|325694524|gb|EGD36433.1| peptide chain release factor RF1 [Streptococcus sanguinis SK150]
 gi|325696481|gb|EGD38371.1| peptide chain release factor RF1 [Streptococcus sanguinis SK160]
 gi|327462229|gb|EGF08556.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1]
 gi|327470059|gb|EGF15523.1| peptide chain release factor RF1 [Streptococcus sanguinis SK330]
 gi|327474249|gb|EGF19656.1| peptide chain release factor RF1 [Streptococcus sanguinis SK408]
 gi|327489584|gb|EGF21376.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1058]
          Length = 359

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|311033344|ref|ZP_07711434.1| peptide chain release factor 1 [Bacillus sp. m3-13]
          Length = 356

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 238/354 (67%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ ++   +S+   +    KL   ++E + I   +     Y   K++  D  
Sbjct: 3   DRLQAVEMRYEKLTELLSDPEVISDTKKLREYSKEQSDIQETVEAYREYKAVKEQLDDAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+++R++ + E+  +E++   L + ++ LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  AMLEDK-LDADMREMVKEEIAELEEQQENLADRLHILLLPKDPNDDKNVIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK EV+ ++    GGYKEI+  I+G+G +S++KFE+G H
Sbjct: 122 EAALFAGDLYRMYSRYAEAQGWKTEVMEAASTGVGGYKEIIFMITGKGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA E++++I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPT  +V    EKSQ +N+ +AMKVLRAR+YD  ++ +  E  ANRK  +G+GDR
Sbjct: 242 VRLTHIPTNTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQREVQAEYDANRKQAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LT+ KL+ +LQG + ++I+ L+   QA  +    
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLQEVIDALIMEDQALRMEQME 355


>gi|22126175|ref|NP_669598.1| peptide chain release factor 1 [Yersinia pestis KIM 10]
 gi|45441669|ref|NP_993208.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108807397|ref|YP_651313.1| peptide chain release factor 1 [Yersinia pestis Antiqua]
 gi|108811662|ref|YP_647429.1| peptide chain release factor 1 [Yersinia pestis Nepal516]
 gi|145598396|ref|YP_001162472.1| peptide chain release factor 1 [Yersinia pestis Pestoides F]
 gi|149366051|ref|ZP_01888086.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|153947351|ref|YP_001401039.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162421626|ref|YP_001606878.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165926418|ref|ZP_02222250.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938830|ref|ZP_02227384.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009117|ref|ZP_02230015.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210440|ref|ZP_02236475.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401373|ref|ZP_02306870.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420420|ref|ZP_02312173.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424382|ref|ZP_02316135.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024410|ref|YP_001720915.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186895374|ref|YP_001872486.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|218929128|ref|YP_002347003.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|229894728|ref|ZP_04509908.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|229897428|ref|ZP_04512584.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229898071|ref|ZP_04513222.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901940|ref|ZP_04517061.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|270490877|ref|ZP_06207951.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294503912|ref|YP_003567974.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|20139332|sp|Q8ZEX8|RF1_YERPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361639|sp|Q1C854|RF1_YERPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361640|sp|Q1CJK1|RF1_YERPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223619|sp|A4TJN7|RF1_YERPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977371|sp|A7FIG1|RF1_YERP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687250|sp|A9QZ08|RF1_YERPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688460|sp|B1JM85|RF1_YERPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691366|sp|B2K2Z0|RF1_YERPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21959139|gb|AAM85849.1|AE013831_12 peptide chain release factor RF-1 [Yersinia pestis KIM 10]
 gi|45436531|gb|AAS62085.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108775310|gb|ABG17829.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Nepal516]
 gi|108779310|gb|ABG13368.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Antiqua]
 gi|115347739|emb|CAL20654.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|145210092|gb|ABP39499.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Pestoides F]
 gi|149292464|gb|EDM42538.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|152958846|gb|ABS46307.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162354441|gb|ABX88389.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165913193|gb|EDR31816.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921639|gb|EDR38836.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991672|gb|EDR43973.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207620|gb|EDR52100.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962115|gb|EDR58136.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049069|gb|EDR60477.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056264|gb|EDR66033.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169750944|gb|ACA68462.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186698400|gb|ACC89029.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|229680836|gb|EEO76931.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|229689112|gb|EEO81177.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693765|gb|EEO83814.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229702201|gb|EEO90220.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|262361967|gb|ACY58688.1| peptide chain release factor 1 [Yersinia pestis D106004]
 gi|262365894|gb|ACY62451.1| peptide chain release factor 1 [Yersinia pestis D182038]
 gi|270339381|gb|EFA50158.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294354371|gb|ADE64712.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|320015305|gb|ADV98876.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 360

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIEAAEMML----DDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKEI+A ISG GVF ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E +  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGTGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|322391878|ref|ZP_08065343.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
           700780]
 gi|321145358|gb|EFX40754.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
           700780]
          Length = 359

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQTVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKEAGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|307296979|ref|ZP_07576795.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
 gi|306877505|gb|EFN08733.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
          Length = 363

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 179/357 (50%), Positives = 260/357 (72%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +S ++I  ++ R  E++  M+ +    + +++L++EYA I P+        + +QE   L
Sbjct: 3   ISAERIAQIEARRDEVQASMTRADLAPEEFVRLSKEYAEIEPVARAAHEVRRLRQELSAL 62

Query: 63  HTVI--GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
             +    D ++D  +R++AQ E+  I+  + + E  +   LLPKD  D +  +LEIRAGT
Sbjct: 63  EYMAGGEDADADPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAADARPAMLEIRAGT 122

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY+RYA  + WK+E++S++ ++ GGYKE+VA+++G GVF+++KFES
Sbjct: 123 GGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVTGVGVFAKLKFES 182

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSAATVAVLPE  E+DV I   D++ID  RASG+GGQHVNTT
Sbjct: 183 GVHRVQRVPVTESGGRIHTSAATVAVLPEPEEVDVQIADSDLKIDIYRASGAGGQHVNTT 242

Query: 241 DSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+GI+VT  + +SQH+N+ +AM+VLRAR+Y+VER+R  +E++  RK  +GS
Sbjct: 243 DSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEVERERAQSEQAGARKAMVGS 302

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           GDRSERIRTYNF QGR+TDHRINLTL++L  +L+G  + ++I+ L+   +A  +   
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAEDEAARLAQL 359


>gi|289163904|ref|YP_003454042.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
 gi|288857077|emb|CBJ10892.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
          Length = 362

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 166/361 (45%), Positives = 244/361 (67%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +  R+ E+   +SE+  +     +  L++EYA + PI +    Y + K 
Sbjct: 1   MKKSLELKLQQMLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEAKD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
               L  ++     D E+  +A  E+ + ++++ EL+ ++ + L+PKD DD+++  LEIR
Sbjct: 61  NVSSLEELLA--GEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDL+RMY RYA  + W+ E++S+S  + GGYKEI+  ISG  V+S++K
Sbjct: 119 AGTGGDEAAIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVA+LPE  E  D+ I  +D+RIDT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    E+SQH+NR +AM +L+ RL D E+ +   E++  RK 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQAQTRKS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRSERIRTYN+ QGR+TDHRINLT+Y+L  V++G +  ++ PL   + A+++   
Sbjct: 299 LVGTGDRSERIRTYNYPQGRLTDHRINLTIYQLNDVMEGKLSLVVEPLKREYHAELLAEL 358

Query: 356 S 356
            
Sbjct: 359 G 359


>gi|296876522|ref|ZP_06900573.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           15912]
 gi|296432515|gb|EFH18311.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           15912]
          Length = 359

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKEAGDDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|291541665|emb|CBL14775.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           bromii L2-63]
          Length = 357

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 164/355 (46%), Positives = 250/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           ++I     R++E+  R+ +       + Y K+ +E  +I  I+     Y +  Q E+D  
Sbjct: 3   EKIEIFDKRYSELSERLYQPSVAGNPEEYQKIMKEIKSIEEIVLTYRKYKEAVQTEKDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+++LAQIE+   +  I+ L  ++  LLLPKD +D+++ I+EIR G GG 
Sbjct: 63  EIL-EETSDKELKELAQIELDEAKDNIKNLAEDLKILLLPKDPNDERNVIVEIRGGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF   LFRMY  YA  + +K+E++++++ + GGYKEI   I G G +SR K+ESGVH
Sbjct: 122 ESALFSAVLFRMYSMYAEKKGFKIEIINANETEIGGYKEISFMIEGEGAYSRFKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTS  TVAVLPEA +++++I   D++IDT R+SG+GGQH+N T SA
Sbjct: 182 RVQRVPETESQGRVHTSTTTVAVLPEAEDVELEIDPNDLKIDTFRSSGAGGQHINKTSSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTG++V    E+SQ++N+ +A+KVL++RL   ++ + A+E + NRK+Q+G+GDR
Sbjct: 242 IRITHLPTGMVVECQDERSQYKNKDKALKVLKSRLLKEKQDKQASEIAENRKMQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR+TDHRI LTLYKLE +L G +D++I+ L+ A +A+ +  + E
Sbjct: 302 SERIRTYNYPQGRVTDHRIGLTLYKLEEILNGSLDEVIDALVAADRAEKLKESME 356


>gi|320538900|ref|ZP_08038576.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
 gi|320031060|gb|EFW13063.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
          Length = 361

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ E++  + ++  +   D +  L+ EYA ++ +      + Q + +      
Sbjct: 8   KLEALQERYEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLKWRQIQGDLATAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D E+R++AQ E+   +   +ELE ++  LLLPKD DD+  C LE+RAGTGG E
Sbjct: 68  M----QDDPEMREMAQEELKQAKATTKELEQQLQVLLLPKDPDDEGGCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A +SG GV+ ++KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAETRRWRVEMISANEGEHGGYKEVIAKVSGEGVYGQLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E ++ DI   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPEVPEAEMPDITQSDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLTLY+L+ V+ G +D +I P++  +QA  + + S
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMAGKLDMLIQPIVQEYQADQLAALS 357


>gi|300723054|ref|YP_003712352.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
           19061]
 gi|297629569|emb|CBJ90172.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
           19061]
          Length = 360

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 165/355 (46%), Positives = 247/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+   + ++  +     +  L++EYA ++ + +    +   + + +    
Sbjct: 8   KLEALQERHEEVLAHLGDAEVIADQERFRALSKEYAQLTDVTNCFKAWKSVQDDLETAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQAELKDAKIRNEELEQQLQVLLLPKDPDDERNCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A +SG  V+  +KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKVSGEQVYGHLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVA+LPE  E +  +I   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAILPEVPEAELPEINPGDLKIDTYRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMRKRQEAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+LE +++G +D +I P++T +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLEEIMEGKLDMLIQPIITEYQADQLSALSE 358


>gi|332366923|gb|EGJ44664.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1059]
          Length = 359

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 154/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E ++    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSTRDTVTAYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|307709438|ref|ZP_07645895.1| peptide chain release factor 1 [Streptococcus mitis SK564]
 gi|307619752|gb|EFN98871.1| peptide chain release factor 1 [Streptococcus mitis SK564]
          Length = 359

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKVEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|288802476|ref|ZP_06407915.1| peptide chain release factor 1 [Prevotella melaninogenica D18]
 gi|288335004|gb|EFC73440.1| peptide chain release factor 1 [Prevotella melaninogenica D18]
          Length = 370

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 142/360 (39%), Positives = 218/360 (60%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+ R+ E+   +++   +     Y+KLT+EY  +  I+     Y       ++  
Sbjct: 9   QKLDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARRRYINCLTTIKEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I + N D+E++++A+ E+   E     LE EI  LL+PKD +D K+  +EIR G GG 
Sbjct: 69  DIITNEN-DAEMKEMAREELSENEALQPALEEEIKLLLVPKDPEDAKNVQMEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+RY   + WK+ + S S+   GG+KEI   + G  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKRYCDKKDWKLSITSVSEGTAGGFKEIDFAVEGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYVDDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGR+TDHRI  T + L+  + G I D+I+ L  A  A+ +  
Sbjct: 308 TLVSTGDRSAKIRTYNYPQGRVTDHRIGFTTHDLQGFMNGEIQDMIDALTVAENAEKLKE 367


>gi|291514939|emb|CBK64149.1| bacterial peptide chain release factor 1 (bRF-1) [Alistipes shahii
           WAL 8301]
          Length = 361

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 229/353 (64%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  LK ++ E   ++++   +     +I+LT+EY  + PII     Y        +   
Sbjct: 9   RLDGLKLKYEETGQKLTDPEVIADVKQFIQLTKEYKELEPIIETSERYRTAIANLAEAKD 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +   + D E+R++A+  +  +E ++ ++E EI  LL+PKD  D K+ I+EIR GTGG E
Sbjct: 69  TLA-TDKDEEMREMAREMIAELEPQLAQMEEEIKLLLIPKDPQDSKNAIVEIRGGTGGDE 127

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDL RMY +Y   + W+ E+ SSSD   GG+KE+V  +SG+ V+  +K+ESGVHR
Sbjct: 128 AAIFAGDLLRMYTKYIESKGWRYEITSSSDGAAGGFKEVVLKVSGQNVYGTLKYESGVHR 187

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTSAA+VAVLPEA E D++I + DIR D   ASG GGQ VNTT SA+
Sbjct: 188 VQRVPQTETQGRVHTSAASVAVLPEAEEFDIEISMNDIRKDIFCASGPGGQSVNTTYSAI 247

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V    +KSQ +N  +A + LR R++++E  +  +E ++ RK  + +GDRS
Sbjct: 248 RLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDEIASKRKTMVSTGDRS 307

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  + 
Sbjct: 308 AKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKESE 360


>gi|115375817|ref|ZP_01463069.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|310822927|ref|YP_003955285.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|115367205|gb|EAU66188.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|309395999|gb|ADO73458.1| Peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
          Length = 366

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 232/355 (65%), Gaps = 6/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++ +++ RF  +   +S    +    KL   ++E AA+  ++     Y +   +  +
Sbjct: 1   MIDKLEEVERRFERLTADLSNPDVLADSAKLQKVSKERAALEKLVETFRTYRKVLGDLAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +   +     D++ +  A+  +  ++++  E E E+  LLLPKD +D+K  ILEIRAG G
Sbjct: 61  VEAWL--DGGDADEKAYAREALPGLKQQREEFEQELKILLLPKDPNDEKDVILEIRAGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  ++ +MY RYA  R WK +++  S    GG K++  T+SG  VFS MK+ESG
Sbjct: 119 GDEAGLFAEEVMQMYLRYATRRGWKADIVDMSPGSVGGVKDVTITLSGAAVFSNMKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTS  TV+V+PEA ++DV I   DI +  MR++GSGGQ VNTTD
Sbjct: 179 VHRVQRVPATETQGRIHTSTITVSVMPEAEDVDVQINPADIEMQVMRSTGSGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H P+GI+V    EKSQ +NR +AM++LRA+LY++E++R+ +ER + R+ Q+G+G
Sbjct: 239 SAVRLIHKPSGIVVKCQQEKSQTKNRAQAMRMLRAKLYEIEQERIRSERDSMRRGQVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSE+IRTYNF Q R+TDHRI+LT++ L  ++ G IDD+I    T +QA+ +   
Sbjct: 299 DRSEKIRTYNFPQDRLTDHRISLTVHNLPGIMAGGIDDVITACRTHYQAEALKQQ 353


>gi|314935933|ref|ZP_07843283.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655939|gb|EFS19681.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
           hominis C80]
          Length = 358

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 249/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  K++E  ++ 
Sbjct: 3   DQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAEID 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E  ++ + E   ++ E+ ELE ++ +LL+PKD +D+K  I+EIRA  GG 
Sbjct: 63  EMLTET-DDKEEIEMLKEEASGLKGELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA  + +K E++ ++++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  ++++++  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITHIPTGI+ TSSEKSQ QNR +A+KVL+ARLYD++ +    + +A RK  +G+GDRS
Sbjct: 242 VRITHIPTGIIATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ER+RTYN+ Q R+TDHRI LTL KL+ +++G +D+II+ L  + Q + +   +
Sbjct: 302 ERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKELN 354


>gi|238855957|ref|ZP_04646243.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
 gi|260664674|ref|ZP_05865526.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
 gi|282934364|ref|ZP_06339631.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|313471876|ref|ZP_07812368.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
 gi|238831430|gb|EEQ23781.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
 gi|239529209|gb|EEQ68210.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
 gi|260561739|gb|EEX27711.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
 gi|281301574|gb|EFA93851.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
          Length = 362

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 157/354 (44%), Positives = 240/354 (67%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L  R+ EI+  M++   ++    Y+++++E A +  ++ K   Y + ++   D   
Sbjct: 7   QLEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISDNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I +  SD+++ ++A+ E   +EKE+ +LE EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  II-ESESDADLVEMAKEENSDLEKEVADLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WK+ V+     + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +        RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQASYDEKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II+ L+  +Q K +   +E
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIISALIVHYQTKQLEELAE 359


>gi|21241714|ref|NP_641296.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|294626107|ref|ZP_06704714.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666025|ref|ZP_06731287.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|24418638|sp|Q8PNU5|RF1_XANAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21107082|gb|AAM35832.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|292599556|gb|EFF43686.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604217|gb|EFF47606.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 361

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 169/363 (46%), Positives = 244/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLQALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+ A +  + +L+ ++  LL+P+D  DD +  LE+R
Sbjct: 61  DLATAEAL----RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +++       D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L D ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSKAAAAEAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQADELAR 356

Query: 355 ASE 357
            S+
Sbjct: 357 LSD 359


>gi|325300471|ref|YP_004260388.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170]
 gi|324320024|gb|ADY37915.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170]
          Length = 370

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 154/362 (42%), Positives = 229/362 (63%), Gaps = 14/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +S I+     Y Q     ++  
Sbjct: 10  EKLDGLVARFEEVSTLITDPSVIADQKRYVKLTKEYKELSDIMKARGEYLQCLNGLEEAK 69

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+  +D E++++A+ E  A E  I ELE EI  LL+P D  DD++ ILEIR GTGG 
Sbjct: 70  MMMGE--NDPELKEMAREEAAACEARIPELEEEIKLLLIPADPQDDRNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+EV S+S+   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYSKYCERKGWKLEVSSASEGASGGFKEIICSVTGDKVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA   DV+I   +I+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEPFDVEINEGEIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|325981709|ref|YP_004294111.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
 gi|325531228|gb|ADZ25949.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
          Length = 359

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 244/353 (69%), Gaps = 9/353 (2%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L  R  E+   +S       +D Y KLT E+A I PI+     Y   +++ Q   
Sbjct: 7   DRLTRLSVRLDELNHLLSSESATADLDHYRKLTREHAEIVPIVELYRSYQHFERDVQTAR 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +      D ++R  A+ E+   ++++ ++E+EI   LLPKD +D+++  LEIRAGTGG 
Sbjct: 67  EMHA----DLDMRAFAETEIQIGKEKLIQIESEIQKQLLPKDPNDERNIFLEIRAGTGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF G+LFRMY RYA  ++W+VE++S S ++ GGYKEI+A I G G +S++KFESG H
Sbjct: 123 ESALFAGNLFRMYSRYAERQRWQVEIISQSLSEIGGYKEIIAKIIGYGAYSKLKFESGGH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TE  GRVHTS  TVA++PEA E+   +    ++RIDT RASG+GGQH+N TDS
Sbjct: 183 RVQRVPVTETQGRVHTSTCTVAIMPEADEVSEVVLNPAELRIDTFRASGAGGQHINKTDS 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH+PTGI+V     +SQH+N+ +A+ VL AR++D + +    E++A RK  +G+G+
Sbjct: 243 AVRVTHLPTGIVVECQDGRSQHKNKAQALSVLAARIHDKQMRAQHAEQAAARKSLVGTGE 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR+TDHRINLTLYK++ ++ G ID++ + L+  HQA+++ +
Sbjct: 303 RSERIRTYNFPQGRVTDHRINLTLYKMDQIMDGDIDELCSALMAEHQAELLAA 355


>gi|150002702|ref|YP_001297446.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482]
 gi|254882204|ref|ZP_05254914.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA]
 gi|294776956|ref|ZP_06742417.1| peptide chain release factor 1 [Bacteroides vulgatus PC510]
 gi|319643236|ref|ZP_07997864.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A]
 gi|149931126|gb|ABR37824.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482]
 gi|254834997|gb|EET15306.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA]
 gi|294449204|gb|EFG17743.1| peptide chain release factor 1 [Bacteroides vulgatus PC510]
 gi|317385140|gb|EFV66091.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A]
          Length = 371

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 149/362 (41%), Positives = 225/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  ++ I+     Y Q     ++  
Sbjct: 10  EKLDGLVARFEEVSTLITDPNVIADQKRYVKLTKEYKDLNDIMKARREYIQCLNGLEEAK 69

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD E++++A+ E    E  I ELE EI  LL+P D  DD++ ILEIR GTGG 
Sbjct: 70  QIMT-NESDPEMKEMAREEANLCEVRIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGD 128

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + W++EV S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 129 EAAIFAGDLFRMYSKYCETKGWRLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVH 188

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA   DV+I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 189 RVQRVPATETQGRVHTSAASVAVLPEAEPFDVEINEGEIKWDTFRSGGAGGQNVNKVESG 248

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 249 VRLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 308

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L  A  A+ +  
Sbjct: 309 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLTVAENAERLKE 368

Query: 355 AS 356
           + 
Sbjct: 369 SE 370


>gi|322385289|ref|ZP_08058934.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
           51100]
 gi|321270548|gb|EFX53463.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
           51100]
          Length = 359

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|29349618|ref|NP_813121.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253570013|ref|ZP_04847422.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6]
 gi|298383879|ref|ZP_06993440.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14]
 gi|32171531|sp|Q8A011|RF1_BACTN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29341528|gb|AAO79315.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840394|gb|EES68476.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6]
 gi|298263483|gb|EFI06346.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14]
          Length = 370

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 147/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF EI   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYIQLLGNIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD+++R++A+ E+   ++ +  LE EI  +L+P D  D K+ ILEIR G GG 
Sbjct: 69  NILS-NESDADMREMAKEEMDNSQERLPALEEEIKLMLVPADPQDSKNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++   + WK+EV ++++   GGYKEIV +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGYKEIVCSVTGDNVYGILKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +I            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|330684805|gb|EGG96498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU121]
          Length = 358

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 246/353 (69%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  D+ 
Sbjct: 3   DQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELADIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E  ++ + E  +++ E+ E+E ++  LL+PKD +D+K  I+EIRA  GG 
Sbjct: 63  EMLNET-SDKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA    +K E++  S++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLMRMYSKYAEAHHFKTEIVEVSESDHGGYKEISFSVSGNGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + ++ RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL  +++G +D+II+ L  + Q   +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLSQIMEGNLDEIIDALTLSEQTDKLKELN 354


>gi|225630064|ref|YP_002726855.1| peptide chain release factor 1 [Wolbachia sp. wRi]
 gi|225592045|gb|ACN95064.1| peptide chain release factor 1 [Wolbachia sp. wRi]
          Length = 357

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 184/357 (51%), Positives = 251/357 (70%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
               + DLK +F +IE  +    ++    +I L++EY+ + PII  I  Y+  K+E  DL
Sbjct: 1   MENNLQDLKKKFNDIERNLENPTNLSQKEFITLSKEYSELRPIIKIIDEYNTLKEEISDL 60

Query: 63  HTVIGDHNSDSEIRD-LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             ++ D NS+ +I++   +      +  + +++ ++   LLPKD DD ++ ILEIRAGTG
Sbjct: 61  EEIMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF   LFRMY++YA  R WK E +S S+   GGYKE  A I+G  VF+R+KFESG
Sbjct: 121 GEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+SGR+HTSAATVA+LPE  E+D  I  +D+RID  R+SG GGQ VNTTD
Sbjct: 181 VHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+V    EKSQH+N+ +A+KVLRARLY++ER++   ERS  RK QIGSG
Sbjct: 241 SAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTMRKSQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF Q RITDHRINLT ++LE ++ +G +D+ I  L++ ++A+ +   S
Sbjct: 301 DRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELDEFIEALISRNEAERLAGES 357


>gi|222153023|ref|YP_002562200.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
 gi|254790901|sp|B9DS45|RF1_STRU0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222113836|emb|CAR41933.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
          Length = 359

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 157/359 (43%), Positives = 232/359 (64%), Gaps = 4/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  L++R+ E+   +S+   V     +++L++E A     ++    Y    Q  
Sbjct: 1   MNIYDQLQSLEDRYEELGELLSDPEVVSDTKRFMELSKEEANTRETVATYRQYKDIIQSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D EI ++A+ E+   +    + E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKESGGDPEIEEMAKEELKESKVAKEDYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY+R+A  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLDMYQRFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  +++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEDVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + + + ++
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLETLNQ 359


>gi|212690981|ref|ZP_03299109.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855]
 gi|237712531|ref|ZP_04543012.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA]
 gi|237726705|ref|ZP_04557186.1| peptide chain release factor 1 [Bacteroides sp. D4]
 gi|265752224|ref|ZP_06088017.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA]
 gi|212666213|gb|EEB26785.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855]
 gi|229435231|gb|EEO45308.1| peptide chain release factor 1 [Bacteroides dorei 5_1_36/D4]
 gi|229453852|gb|EEO59573.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA]
 gi|263237016|gb|EEZ22486.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA]
          Length = 371

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 150/362 (41%), Positives = 225/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  ++ I+     Y Q     ++  
Sbjct: 10  EKLDGLVARFEEVSTLITDPNVIADQKRYVKLTKEYKDLNDIMKARREYIQCLNGLEEAK 69

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD E++++A+ E    E  I ELE EI  LL+P D  DD++ ILEIR GTGG 
Sbjct: 70  QIMT-NESDPEMKEMAREEANLCEVRIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGD 128

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+EV S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 129 EAAIFAGDLFRMYSKYCETKGWKLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVH 188

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA   DV+I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 189 RVQRVPATETQGRVHTSAASVAVLPEAEPFDVEINEGEIKWDTFRSGGAGGQNVNKVESG 248

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 249 VRLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 308

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L  A  A+ +  
Sbjct: 309 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLTVAENAERLKE 368

Query: 355 AS 356
           + 
Sbjct: 369 SE 370


>gi|293609440|ref|ZP_06691742.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827892|gb|EFF86255.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122703|gb|ADY82226.1| peptide chain release factor 1 [Acinetobacter calcoaceticus PHEA-2]
          Length = 362

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 245/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++++  +     + KL+ E++ +S I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+ A +  + ELE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEMM----KSDPDFKDMAEEEIQANKTLLEELESQLNILMIPKDPNDSNAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GG+KE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   + +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|169832291|ref|YP_001718273.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|238688348|sp|B1I6L2|RF1_DESAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169639135|gb|ACA60641.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 355

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 244/352 (69%), Gaps = 5/352 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ ++ E+   +S+   +    +     + +A I  +++    Y +   E  D   
Sbjct: 4   KLDHLEAKYEELNRLISDPVVIQDQERWRGYVKSHAEIGEVVAVYREYKRVAAEMDDARQ 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D+E+R+LA+ EV  + +   EL   +  LLLPKD +D+K+ I+EIRAGTGG E
Sbjct: 64  MLREE-QDAELRELAESEVEVLRERSDELRRRLRVLLLPKDPNDEKNVIIEIRAGTGGEE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDL RMY RYA  R W+ E+L+ ++ D GG KE +  + GRG +S +KFESGVHR
Sbjct: 123 AALFAGDLLRMYLRYAERRGWRAEMLNVNETDLGGIKEAIVLLEGRGAYSELKFESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSAATVAVLPEA E+DV+I  ED+RID   ++G GGQ VNTT SAV
Sbjct: 183 VQRVPATESGGRIHTSAATVAVLPEAEEVDVEIRPEDLRIDVFCSTGPGGQSVNTTQSAV 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+P+GI+V    EKSQH+NR +AMKVLRARL D  ++      +++RK Q+G+GDRS
Sbjct: 243 RVTHLPSGIVVSCQDEKSQHKNRDKAMKVLRARLLDKAQQEQQERIASSRKTQVGTGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           ERIRTYNF Q R+TDHR+NLTLY+LE VLQG + + ++ L+T+ QA+ + + 
Sbjct: 303 ERIRTYNFPQNRVTDHRLNLTLYRLEEVLQGDLHEFVSALITSDQAEKLKTL 354


>gi|34580401|ref|ZP_00141881.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
 gi|28261786|gb|EAA25290.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
          Length = 355

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 176/354 (49%), Positives = 250/354 (70%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 1   MRFSDNLAKILDKYENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ +R+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ +  L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIADDEAKKLLE 354


>gi|322411678|gb|EFY02586.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 359

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D N D E+ ++A+ E+   +    + E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  ADAEEMIKDANGDPELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY+++A  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV ++PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+II+ L+   Q + + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQTQKLESLN 358


>gi|260549389|ref|ZP_05823608.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
 gi|260407498|gb|EEX00972.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
          Length = 362

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 245/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++++  +     + KL+ E++ ++ I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+ A +  + ELE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEMM----KSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GG+KE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   + +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|238899147|ref|YP_002924829.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259585226|sp|C4K7Y8|RF1_HAMD5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229466907|gb|ACQ68681.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 360

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 249/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L+ R  E++  +++  ++    +   ++ EYA +S I    + + + + 
Sbjct: 1   MKPSFIKKLEALQERHEELQAHLADPLTIQDQERFRMMSREYAQLSNIAELFTEWLKLQN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +     +++     D E+ ++A  E+   + +  +L  ++  LLLPKD DD +SC LEIR
Sbjct: 61  DMIAAKSLLQ----DPEMHEMATEELEKAKIQSEQLTQQLQILLLPKDIDDSRSCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R WK+E++S+ + + GGYKE++  ISG GV+ ++K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAESRSWKMEIISAHEGEHGGYKEMITKISGEGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E +   I L D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPTTESQGRIHTSACTVAVMPEIPEEELPKITLSDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR++  + ++    +++ R+ 
Sbjct: 237 VNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARMHAAQVQKRQQAQASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V+ G +D +I+PLL  HQA ++ + 
Sbjct: 297 LLGSGDRSDRHRTYNFPQGRVTDHRINLTLYRLDEVMSGKLDILIHPLLREHQADLLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|294341235|emb|CAZ89636.1| Peptide chain release factor 1 (RF-1) [Thiomonas sp. 3As]
          Length = 358

 Score =  272 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 157/352 (44%), Positives = 228/352 (64%), Gaps = 9/352 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  ++ R  E++  ++       +  +  +T E A +  ++     Y  K +
Sbjct: 1   MKPSLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKTKTE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +     +++    SD ++++LAQ E+      +  LE  +   LLP+D DD ++  +EIR
Sbjct: 61  DLSQAESLL----SDPDMKELAQQEIQDARAALDALEARLQVALLPRDPDDSRNVFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL RMY RYA  ++W  EV+S S +D GGYKE++  ++G G +  +K
Sbjct: 117 AGTGGEESALFAADLLRMYARYAERKRWTTEVISESPSDLGGYKEVILRVAGEGAYGLLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           +ESG HRVQRVP TE  GR+HTSAATVAV+PE  E   + I   D+RIDT RASG+GGQH
Sbjct: 177 YESGGHRVQRVPKTETQGRIHTSAATVAVMPEVDEAQAIQINPSDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITH+PTG++V    E+SQH+N+ RA+ VL ARL + ER+    E +A RK 
Sbjct: 237 INKTDSAIRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQARQAEEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +GSGDRS+RIRTYNF QGR+++HRINLTLYK++ +L G +D+++  L T  
Sbjct: 297 LVGSGDRSDRIRTYNFPQGRVSEHRINLTLYKIDAILDGDLDELLTALRTED 348


>gi|312865182|ref|ZP_07725410.1| peptide chain release factor 1 [Streptococcus downei F0415]
 gi|311099293|gb|EFQ57509.1| peptide chain release factor 1 [Streptococcus downei F0415]
          Length = 359

 Score =  272 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 158/359 (44%), Positives = 233/359 (64%), Gaps = 4/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMQLSREEASSRETVTVYREYKQILQAI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D E+ ++A+ E+   +    + E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKEAGGDPELEEMAKEELKDSKIAKEDYEEKMKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLNMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K +   ++
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVLYDQTKKLEELAQ 359


>gi|262282281|ref|ZP_06060049.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
 gi|262261572|gb|EEY80270.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
          Length = 359

 Score =  272 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|327460378|gb|EGF06715.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1057]
          Length = 359

 Score =  272 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|322389535|ref|ZP_08063086.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           903]
 gi|321143810|gb|EFX39237.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           903]
          Length = 359

 Score =  272 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKEAGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|194398144|ref|YP_002037655.1| peptide chain release factor 1 [Streptococcus pneumoniae G54]
 gi|238690818|sp|B5E4D9|RF1_STRP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194357811|gb|ACF56259.1| peptide chain release factor 1 [Streptococcus pneumoniae G54]
          Length = 359

 Score =  272 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    +     Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEXDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|153807530|ref|ZP_01960198.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185]
 gi|149129892|gb|EDM21104.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185]
          Length = 370

 Score =  272 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 148/362 (40%), Positives = 228/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF EI   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLGNIEEAR 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD+++R++A+ E+ + ++ +  LE EI  +L+P D  D K+ ILEIR GTGG 
Sbjct: 69  NILA-NESDADMREMAKEEMDSSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+EV S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYAKYCETKGWKMEVSSANEGAAGGFKEIICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +I            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLTAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|311279353|ref|YP_003941584.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
 gi|308748548|gb|ADO48300.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
          Length = 360

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 166/355 (46%), Positives = 249/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   + +  +LE ++  LLLPKD DD+++  +E+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKDKSEQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKE++A +SG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEVIAKVSGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E ++ +I   ++RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAEMPEINPTELRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEYQADQLAALSE 358


>gi|169795523|ref|YP_001713316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
 gi|213158536|ref|YP_002319834.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
 gi|215483010|ref|YP_002325215.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
 gi|332850713|ref|ZP_08432960.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
 gi|332866986|ref|ZP_08437303.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
 gi|226739095|sp|B7H0L9|RF1_ACIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739096|sp|B7IBA1|RF1_ACIB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688120|sp|B0V7E0|RF1_ACIBY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169148450|emb|CAM86316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
 gi|213057696|gb|ACJ42598.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
 gi|213989032|gb|ACJ59331.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
 gi|332730550|gb|EGJ61866.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
 gi|332734315|gb|EGJ65443.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
          Length = 362

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 245/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++++  +     + KL+ E++ ++ I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+ A +  + ELE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEMM----KSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GG+KE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   + +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|188996904|ref|YP_001931155.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931971|gb|ACD66601.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 360

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 246/353 (69%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  ++ +  ++E  M++   +    K+    +E+  +S I++  + Y +  ++ +++  
Sbjct: 8   QLESIEEKVKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVSRQIEEVKQ 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D ++R+LA+ E+ +++K+  +LE +I   LLPKD +D+K+ ILEIR G GG E
Sbjct: 68  LLNSTPDD-DLRELAEEELESLKKQQEDLEKKIEIALLPKDPNDEKNVILEIRQGAGGDE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF  +LFRMY+RYA    WK E+LS    + GG KE++A I G+G +SR+K+ESGVHR
Sbjct: 127 ASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+SGR+HTS  TVAVLPEA E+D++I  E+++I+TMRA G+GGQHVNTTDSAV
Sbjct: 187 VQRVPETESSGRIHTSTVTVAVLPEAEEVDIEIKPEELKIETMRAGGAGGQHVNTTDSAV 246

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTG++V    E+SQ QN+++AM++LRARL D   +    + +  RK Q+G+G+RS
Sbjct: 247 RITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYYERLEKEKIAKERKEQVGTGERS 306

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYNF Q R+TDHR+N T Y++  ++ G +D+II+ L+     + + +  
Sbjct: 307 EKIRTYNFPQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKENEEKLANLE 359


>gi|15672577|ref|NP_266751.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|13878663|sp|Q9CHX3|RF1_LACLA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12723487|gb|AAK04693.1|AE006292_13 peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406096|gb|ADZ63167.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis
           CV56]
          Length = 357

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 228/354 (64%), Gaps = 4/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +  R+ E+   +S+   V     +++L+ E A +   ++  + Y +  +   D  
Sbjct: 3   DQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISDSE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D +++++ + E+ + + +   LE EI  LLLPKD +D K+ ILEIR   GG 
Sbjct: 63  EMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL  MY+ ++  + WK E++ ++    GGYKE+ A ISG  V+S++K+ESG H
Sbjct: 123 EAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTS ATV V+PE  E ++ I  +D+R+D   ASG+GGQ+VN   +A
Sbjct: 183 RVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIDQKDLRVDIYHASGAGGQNVNKVATA 242

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V    E++Q +NR +A+K+L  +++D  ++   ++++A RK  +G+GDR
Sbjct: 243 VRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K +   +
Sbjct: 303 SERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEELN 356


>gi|116511384|ref|YP_808600.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123125765|sp|Q031E4|RF1_LACLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116107038|gb|ABJ72178.1| bacterial peptide chain release factor 1 (bRF-1) [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 357

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 228/354 (64%), Gaps = 4/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +  R+ E+   +S+   V     +++L+ E A +   ++  + Y +  +   D  
Sbjct: 3   DQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISDSE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E++++ + E+ + + +   LE EI  LLLPKD +D K+ ILEIR   GG 
Sbjct: 63  EMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL  MY+ ++  + WK E++ ++    GGYKE+ A ISG  V+S++K+ESG H
Sbjct: 123 EAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTS ATV V+PE  E ++ I  +D+R+D   ASG+GGQ+VN   +A
Sbjct: 183 RVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIEQKDLRVDIYHASGAGGQNVNKVATA 242

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V    E++Q +NR +A+K+L  +++D  ++   ++++A RK  +G+GDR
Sbjct: 243 VRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K +   +
Sbjct: 303 SERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEELN 356


>gi|228474912|ref|ZP_04059641.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
 gi|228271144|gb|EEK12524.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
          Length = 358

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 250/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  K++E  ++ 
Sbjct: 3   DQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAEID 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E  ++ + E L ++ E+ ELE ++ +LL+PKD +D+K  I+EIRA  GG 
Sbjct: 63  EMLTET-DDKEEIEMLKEEALGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA  + +K E++ ++++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  ++++++  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITHIPTGI+ TSSEKSQ QNR +A+KVL+ARLYD++ +    + +A RK  +G+GDRS
Sbjct: 242 VRITHIPTGIIATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ER+RTYN+ Q R+TDHRI LTL KL+ +++G +D+II+ L  + Q + +   +
Sbjct: 302 ERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKELN 354


>gi|307704777|ref|ZP_07641673.1| peptide chain release factor 1 [Streptococcus mitis SK597]
 gi|307621686|gb|EFO00727.1| peptide chain release factor 1 [Streptococcus mitis SK597]
          Length = 359

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E ++    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSSRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|171462958|ref|YP_001797071.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692839|sp|B1XSY0|RF1_POLNS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171192496|gb|ACB43457.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 359

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 240/362 (66%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R AE+   ++       +DAY KLT E++ I+ ++ +  +Y Q + 
Sbjct: 1   MKPSMRAKLDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFYLYKQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q    +      D E+++ A  E       +  LE+ +  LLLPKD +D+++  LEIR
Sbjct: 61  DAQAAEEMRK----DPEMKEFADEEQKQALATMEALESTLQKLLLPKDENDERNVFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E ALF GDL RMY R+A  + WKVEV+S++++D GGYKE+V  + G+ V+SR+K
Sbjct: 117 AGTGGDEGALFAGDLLRMYTRFAERQGWKVEVVSAAESDLGGYKEVVLRLVGQAVYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE  GR+HTSA TVAV+PE  E   V I   ++RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPQTETQGRIHTSACTVAVMPETDELEAVKINPAELRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITH+PTG +V    ++SQH+NR +AMKVL +R+ D   +      +  RK 
Sbjct: 237 INKTDSAIRITHLPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+RIRTYNF QGRITDHRINLTLYK++ ++ G IDD+ N L + HQA+++ + 
Sbjct: 297 LVGTGDRSDRIRTYNFPQGRITDHRINLTLYKIDAMMDGDIDDLCNALASEHQAELLAAL 356

Query: 356 SE 357
            +
Sbjct: 357 GD 358


>gi|327399685|ref|YP_004340554.1| peptide chain release factor 1 [Hippea maritima DSM 10411]
 gi|327182314|gb|AEA34495.1| Peptide chain release factor 1 [Hippea maritima DSM 10411]
          Length = 354

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 184/345 (53%), Positives = 244/345 (70%), Gaps = 8/345 (2%)

Query: 16  FAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           +  IE ++S+   V   D Y  L+ E   ++PI+ K   Y    ++ ++      +   D
Sbjct: 13  YKYIETQLSDPNVVGDLDRYKSLSSEIKKLTPIVEKAKEYRNILRQIEE----NEELLED 68

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E+++LA+ E+  +++ + ELE EI  LLLPKD  DD+  ILEIRAGTGG EAALF  DL
Sbjct: 69  EELKELAKEELKHLKERLPELEQEIKLLLLPKDEADDRDVILEIRAGTGGEEAALFAADL 128

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
           FRMY RYA  + +KVEVLS S +D GG KEI+A I G+G +   K ESG HRVQR+P TE
Sbjct: 129 FRMYSRYAENKGFKVEVLSKSLSDTGGIKEIIAEIKGKGAYHLFKHESGTHRVQRIPITE 188

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           + GR+HTSAATVAVLPEA  +DV+I  ED+RID  RASG GGQHVNTTDSAVRITH+PTG
Sbjct: 189 SQGRIHTSAATVAVLPEAENVDVEIKPEDLRIDVFRASGHGGQHVNTTDSAVRITHLPTG 248

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           ++V    EKSQ +N+ +A+K+L++RLYD  R++   ER+  RK QIGSGDRSERIRTYNF
Sbjct: 249 MVVSCQDEKSQLKNKEKALKILKSRLYDFYRRKKDEERAKERKSQIGSGDRSERIRTYNF 308

Query: 312 SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            QGR+TDHRINLTLYKL+ +++G +D++I  L+   QA+ +  + 
Sbjct: 309 PQGRVTDHRINLTLYKLDSIMEGDLDELIEALIVDEQARKLKESG 353


>gi|322374351|ref|ZP_08048865.1| peptide chain release factor 1 [Streptococcus sp. C300]
 gi|331266424|ref|YP_004326054.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
 gi|321279851|gb|EFX56890.1| peptide chain release factor 1 [Streptococcus sp. C300]
 gi|326683096|emb|CBZ00714.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
          Length = 359

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEDMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|317052432|ref|YP_004113548.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
 gi|316947516|gb|ADU66992.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
          Length = 355

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 172/353 (48%), Positives = 250/353 (70%), Gaps = 5/353 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQD 61
             +++ D+++R+  +   +S   +     +L     E + +  ++     +   ++E  D
Sbjct: 1   MLEKLQDIEDRYELLSAELSHPGATADTQRLQQATRELSELREVVEAFQQFKTVRRELAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E+R++ Q E+ ++  + ++LE+ +  LLLP+D +D K+ ILEIRAGTG
Sbjct: 61  NQEMLT-SEKDRELREMIQQEIQSLRHQEQQLEDTLTELLLPRDPNDTKNIILEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY RYA  R WKVEVLS ++  +GG++EI++ I GR V+SR+KFESG
Sbjct: 120 GEEAALFATDLFRMYSRYADERGWKVEVLSVNETGNGGFREIISMIEGRNVYSRLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+SGR+HTSA TVAVLPEA E+D+DI   D+RID  R+SG+GGQHVNTTD
Sbjct: 180 THRVQRVPQTESSGRIHTSAVTVAVLPEAEEVDIDINPADLRIDVYRSSGAGGQHVNTTD 239

Query: 242 SAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG+ +     +SQH+N+ +A+ +LR+RL D   ++  ++RS +RKLQ+GSG
Sbjct: 240 SAVRVTHIPTGVSVACQEGRSQHKNKEKALSILRSRLLDHAVQQSDSQRSQDRKLQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSERIRTYNF QGR+TDHR+NLTL++LE VL+G +D++I+ L  + +A  + 
Sbjct: 300 DRSERIRTYNFPQGRVTDHRVNLTLHRLEQVLEGDLDEVIDTLTKSARAGELS 352


>gi|301060315|ref|ZP_07201178.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
 gi|300445511|gb|EFK09413.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
          Length = 358

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 180/358 (50%), Positives = 249/358 (69%), Gaps = 6/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
                ++ + + R+ E+E  + +   +     + K  +E++ ++PII+ +  +   + E 
Sbjct: 1   MAMFDKMKETEERYRELETFLGQPEIIQDQKRFQKYAKEHSDLTPIITVLREHQALQDEI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +  +++ D   D EI+ LA+ E+  +   +    +E+  LLLPKD +D+K+ +LEIRAG
Sbjct: 61  AESQSLLQDP--DPEIKKLAKEEIEGLNDRLERTADELTVLLLPKDPNDEKNILLEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  DLFRMY RYA LR+WK E+LS +    GG+KE++  I G  VFSR+K+E
Sbjct: 119 TGGEEAALFAADLFRMYSRYAELRRWKTEILSQNMTGIGGFKEVIVLIEGHRVFSRLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TEA GR+HTSA TVAVLPEA E+DV+I  ED+RID  R+SG GGQHVNT
Sbjct: 179 SGVHRVQRVPETEAQGRIHTSAVTVAVLPEAEEVDVEIKPEDLRIDVYRSSGHGGQHVNT 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    EKSQH+N+ +AMKVLR+R+ D+E     +  S  RK  +G
Sbjct: 239 TDSAVRITHLPTGLVVTCQDEKSQHKNKAKAMKVLRSRMLDLETAHQHSRISEERKTMVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF QGR+TDHRI LTLYKL+  LQG ++ II PL+T  Q++ + ++ 
Sbjct: 299 TGDRSERIRTYNFPQGRVTDHRIGLTLYKLDDFLQGDLNLIIEPLITYFQSEALKNSG 356


>gi|78046531|ref|YP_362706.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|119361637|sp|Q3BX07|RF1_XANC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78034961|emb|CAJ22606.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 361

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 169/363 (46%), Positives = 244/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAMALEEEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+ A +  + +L+ ++  LL+P+D  DD +  LE+R
Sbjct: 61  DLATAEAL----RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +++       D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L D ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSKAAAAEAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQADELAR 356

Query: 355 ASE 357
            S+
Sbjct: 357 LSD 359


>gi|325689728|gb|EGD31732.1| peptide chain release factor RF1 [Streptococcus sanguinis SK115]
          Length = 359

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEDMIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|58583231|ref|YP_202247.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625067|ref|YP_452439.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575465|ref|YP_001912394.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|75434334|sp|Q5GWQ9|RF1_XANOR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361638|sp|Q2NZW2|RF1_XANOM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689539|sp|B2SQN5|RF1_XANOP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58427825|gb|AAW76862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369007|dbj|BAE70165.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519917|gb|ACD57862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 361

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 169/363 (46%), Positives = 245/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+ A +  + EL+ ++  LL+P+D  DD +  LE+R
Sbjct: 61  DLSAAEAM----RTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +++  +    D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L D E  + A  ++  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTEHSKAAAAQAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQADELAR 356

Query: 355 ASE 357
            S+
Sbjct: 357 LSD 359


>gi|238788553|ref|ZP_04632346.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
 gi|238723466|gb|EEQ15113.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
          Length = 360

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DLDAAEMMLE----DPEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A +SG GVF ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|332637164|ref|ZP_08416027.1| peptide chain release factor 1 [Weissella cibaria KACC 11862]
          Length = 361

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 147/353 (41%), Positives = 231/353 (65%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  + +R+ EI   +S+   +     ++ L++E  ++   +     Y       +   
Sbjct: 6   EKVQAVVDRYDEISEMISDPDVISDTQRFMALSKEEGSLRETVETFKRYKDVVDGIEGNE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+ ++A+ E+  ++ E   LE +I  LLLPKD +DDK+ I+EI    GG 
Sbjct: 66  EMLNEGLGDAELEEMAKDELKELKAEKETLEEQIKILLLPKDPNDDKNIIMEIHGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E ALF  DL+ MY+RYA  + W VE++  +  + GGYKEIV  I+G  V+S++KFE+G H
Sbjct: 126 EGALFAADLYDMYQRYAEKQGWNVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  ++D++I  +D+R+D  R+SG+GGQHVN T SA
Sbjct: 186 RVQRVPETESAGRVHTSTATVGVMPEYEDVDIEIEDKDLRVDVYRSSGAGGQHVNKTSSA 245

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+P+GI+V    ++SQ QNR +A+++L+AR+YD    +   E +  RK  +G+GDR
Sbjct: 246 VRMTHLPSGIVVAMQDQRSQQQNRAKALEILKARVYDYYASQNEAEYAEQRKTAVGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI L+L KL+ ++ G ++D+I+ L+ A Q   +   
Sbjct: 306 SERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALIIADQTAKLEEL 358


>gi|259908618|ref|YP_002648974.1| peptide chain release factor 1 [Erwinia pyrifoliae Ep1/96]
 gi|224964240|emb|CAX55747.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae Ep1/96]
          Length = 360

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+E  + ++  +     +  L+ EYA ++ +      + Q +++      
Sbjct: 8   KLEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++G    D+E+R++AQ E+ A      EL+ ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  MLG----DAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+WKVEV+S+++ + GGYKE++A + G G + R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  DI   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL +R+   E  R   E S+ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLT+Y+L+  ++G +D +I P++  +QA  + + S
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTIYRLDEAMEGKLDALIEPIVQEYQADQLAALS 357


>gi|125717977|ref|YP_001035110.1| peptide chain release factor 1 [Streptococcus sanguinis SK36]
 gi|166223611|sp|A3CN05|RF1_STRSV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125497894|gb|ABN44560.1| Protein chain release factor A, putative [Streptococcus sanguinis
           SK36]
 gi|324991176|gb|EGC23110.1| peptide chain release factor RF1 [Streptococcus sanguinis SK353]
 gi|324994440|gb|EGC26353.1| peptide chain release factor RF1 [Streptococcus sanguinis SK678]
          Length = 359

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKKVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|157150598|ref|YP_001450441.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|172046863|sp|P47850|RF1_STRGC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157075392|gb|ABV10075.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 359

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|300716406|ref|YP_003741209.1| peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
 gi|299062242|emb|CAX59359.1| Peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
          Length = 360

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+E  + ++  +   D +  L+ EYA ++ +      + Q + +      
Sbjct: 8   KLEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVSQCFRRWQQNQDDIAAAEE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+RD+AQ E+        +LE E+  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  ML----DDPEMRDMAQEELKDARATSEQLEQELQVLLLPKDPDDERNCYLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+WK+E++S++D + GGYKE++A + G G + R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAETRRWKIEIMSTNDGEHGGYKEVIAKVIGDGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVA++PE  E ++ +I   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAIMPELPEAEMPEINAGDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR+   E  R+  E ++ R+  +G+GDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAETARLHQEEASTRRNLLGTGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYN+ QGRITDHRINLTLY+L+  +QG +D +I P++  +QA  + + S
Sbjct: 304 SDRNRTYNYPQGRITDHRINLTLYRLDEAMQGKLDMLIEPIVQEYQADQLAALS 357


>gi|262369773|ref|ZP_06063101.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
 gi|262315841|gb|EEY96880.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
          Length = 362

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 240/362 (66%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   +++   +     + +L+ E++ +S I    + Y Q + 
Sbjct: 1   MKESLRLRLDQLSDRHEELTALLADVEVISDNKRFRQLSREHSDLSEITEVWTKYKQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++    SD + +++A  E+   +  I  LE ++N L++PKD +D  S  LEIR
Sbjct: 61  DIETAEAML----SDPDFKEMAVEEIKENKAIIASLEADLNILMIPKDPNDANSAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDL+RMY +YA  + W++EVLS ++ + GGYKEI+  ++G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLYRMYTKYAESQGWRIEVLSENEGEHGGYKEIICLVNGEGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   +  V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTTVEINASDLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL   +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLASRLESAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ V++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAVMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|225010612|ref|ZP_03701082.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C]
 gi|225005165|gb|EEG43117.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C]
          Length = 358

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 160/357 (44%), Positives = 232/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K RF E+   + +   +     Y++L +EY  +  ++ K  +Y       ++
Sbjct: 1   MLEKLHVVKQRFDEVSDLIIQPDIIQDQKRYVQLNKEYKDLKSLMDKRELYISFTNNIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+E+ ++A++++   +  +  LE EI +LL+PK+ +D K+ ++EIRAGTG
Sbjct: 61  SQEII-DDGSDAEMVEMAKMQLDEAKAALPALEEEIKFLLIPKEPEDAKNVVVEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y   R WK  V+  S+   GGYKEI   ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGYKEIQFEVNGEDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQIDPKDVRIDFFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++     +KSQH+N+ +A  VLR+RLYD+E  +     +A R  Q+ SG
Sbjct: 240 SAVRLTHLPTGLVAQCQDQKSQHKNKDKAFVVLRSRLYDMELAKKQEADAAKRNSQVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+ QGR+TDHRI LTLY L+ ++ G I  I++ L+     + +  ASE
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLQNIVNGDIQKILSELMLVDNTEKLKEASE 356


>gi|307706536|ref|ZP_07643343.1| peptide chain release factor 1 [Streptococcus mitis SK321]
 gi|307617991|gb|EFN97151.1| peptide chain release factor 1 [Streptococcus mitis SK321]
          Length = 359

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASSRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLIMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ D+  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDLDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|238797830|ref|ZP_04641323.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
 gi|238718358|gb|EEQ10181.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
          Length = 360

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ + +    +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTNCFKEWRSTQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIEAAEMML----DDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A +SG G F ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTG++V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGTGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|295100871|emb|CBK98416.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
           prausnitzii L2-6]
          Length = 361

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 234/354 (66%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  +  RF E+ +R+++  +        +L +EY    P++         +        
Sbjct: 7   QMEAVCRRFEELSIRLNQPETAADPAQLRRLMQEYHEAQPVVDAYHALTTAQDHLAQAKA 66

Query: 65  VIG-DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++  D   D++ + + Q E+    +++ ELEN +  LLLPKD +D+KS I+EIRAG GG 
Sbjct: 67  LLEGDEPLDADFKAMVQQELSEKSQDVAELENNLKILLLPKDANDEKSVIMEIRAGAGGE 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L RMY  Y   R W++E+L+ ++ + GG KE V  ++GRG ++R+K+ESGVH
Sbjct: 127 EAALFAHSLVRMYTMYVQSRGWEMELLNLNETELGGTKEAVFAVNGRGAYNRLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTS ATVAV+P+A E+D  + ++D+RIDT R+SG+GGQH+N T SA
Sbjct: 187 RVQRVPETETQGRIHTSTATVAVMPQAEEVDFALDMKDLRIDTFRSSGAGGQHINKTSSA 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +R+THIPTG +V   +E+SQ QN+ +A+++LR+RL   ++K   +  +A+R  Q+G+GDR
Sbjct: 247 IRVTHIPTGTVVECQNERSQFQNKDKALEILRSRLLAQKQKEQQDAINADRAGQVGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF Q R TDHRI LT++ L+ ++ G +DDII+ L T  QA+ +   +
Sbjct: 307 SEKIRTYNFPQDRCTDHRIGLTVHNLDKIMDGDLDDIIDALATREQAERLQKLN 360


>gi|169633250|ref|YP_001706986.1| peptide chain release factor 1 [Acinetobacter baumannii SDF]
 gi|184158674|ref|YP_001847013.1| peptide chain release factor 1 [Acinetobacter baumannii ACICU]
 gi|239501457|ref|ZP_04660767.1| peptide chain release factor 1 [Acinetobacter baumannii AB900]
 gi|260554585|ref|ZP_05826806.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606]
 gi|332874369|ref|ZP_08442280.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
 gi|238685536|sp|A3M6N7|RF1_ACIBT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688133|sp|B0VM26|RF1_ACIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690970|sp|B2HU82|RF1_ACIBC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169152042|emb|CAP00926.1| peptide chain release factor 1 [Acinetobacter baumannii]
 gi|183210268|gb|ACC57666.1| Protein chain release factor A [Acinetobacter baumannii ACICU]
 gi|193077723|gb|ABO12581.2| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
 gi|260411127|gb|EEX04424.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606]
 gi|322507515|gb|ADX02969.1| prfA [Acinetobacter baumannii 1656-2]
 gi|323518589|gb|ADX92970.1| peptide chain release factor 1 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737448|gb|EGJ68364.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
          Length = 362

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 245/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++++  +     + KL+ E++ ++ I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+ A +  + ELE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEMM----KSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GG+KE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   + +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|319893069|ref|YP_004149944.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162765|gb|ADV06308.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 358

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 249/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V       K ++E + +   +     Y Q K++ +++ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEEIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D++  ++ + E  A++ E+ ELE ++  LL+PKD +D+K  I+EIR   GG 
Sbjct: 63  LMLAET-DDADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++A   ++K+E++ ++++D GGYKEI  ++SG G +S++K+E+G H
Sbjct: 122 EAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITHIPTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + +A RK  +G+GDRS
Sbjct: 242 VRITHIPTGVIATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAAQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL+ +++G +D+I++ L    Q + +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIVDALTMHEQTEKLKELN 354


>gi|330719389|ref|ZP_08313989.1| peptide chain release factor 1 [Leuconostoc fallax KCTC 3537]
          Length = 359

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 150/357 (42%), Positives = 226/357 (63%), Gaps = 10/357 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+  + +R  E+   +++   +     Y+ L++E  +I   ++    Y    Q+ QD  
Sbjct: 6   EQLQTVVDRHDELNELLADPEVMSDSKRYMALSKEEGSIRETVTVFKQYQSVLQDIQDAE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D+++ +LA+ ++  ++ +   LE ++  L+LP+D +DDK+ I+EIR   GG 
Sbjct: 66  DLL----DDTDMAELARDDLKTLKPQKASLEEQLKVLMLPQDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E++LF  DL  MY +YA  + W + ++  S  + GGYKE+V  I+G  V+S++KFESG H
Sbjct: 122 ESSLFAADLLDMYRKYAEKQNWHINLIDESATEVGGYKEVVVMITGNNVYSKLKFESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEID--VDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQRVP TE  GRVHTS ATV V+PE  ++D    I  +D+R D  R+SG+GGQHVN T 
Sbjct: 182 RVQRVPVTETQGRVHTSTATVGVMPEFEDVDATDLIDPKDVREDVYRSSGAGGQHVNKTS 241

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+R+TH PTGI V    E+SQ QNR +A K+L AR+YD   ++   E +  RK  +G+G
Sbjct: 242 SAIRLTHEPTGITVAMQDERSQQQNRAKAWKILNARVYDYFAQQNEAEYAQKRKTAVGTG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSERIRTYNF Q R+TDHRI LTL KL+ V+ G ++DII+ L+ A Q   +   ++
Sbjct: 302 DRSERIRTYNFPQNRVTDHRIGLTLNKLDRVMNGELEDIIDALIIADQTAKLADLNQ 358


>gi|53712203|ref|YP_098195.1| peptide chain release factor 1 [Bacteroides fragilis YCH46]
 gi|60680383|ref|YP_210527.1| peptide chain release factor 1 [Bacteroides fragilis NCTC 9343]
 gi|253563758|ref|ZP_04841215.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5]
 gi|265765536|ref|ZP_06093811.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16]
 gi|61214601|sp|Q64XW5|RF1_BACFR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81316547|sp|Q5LH11|RF1_BACFN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52215068|dbj|BAD47661.1| peptide chain release factor 1 [Bacteroides fragilis YCH46]
 gi|60491817|emb|CAH06575.1| putative peptide chain release factor 1 [Bacteroides fragilis NCTC
           9343]
 gi|251947534|gb|EES87816.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5]
 gi|263254920|gb|EEZ26354.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16]
 gi|301161917|emb|CBW21461.1| putative peptide chain release factor 1 [Bacteroides fragilis 638R]
          Length = 370

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 147/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLANIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD+++R++A+ E+   ++ +  LE EI  LL+P D  D K+ ILEIR GTGG 
Sbjct: 69  DILS-NESDADMREMAKEEMDNSQERLPVLEEEIKLLLVPADPQDGKNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++   + WK+EV S+++   GGYKEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +I            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I + I+ L  A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|258406203|ref|YP_003198945.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
 gi|257798430|gb|ACV69367.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
          Length = 356

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 189/354 (53%), Positives = 250/354 (70%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++ R+AEIE  +S S  +     Y +L + +A +  IIS    Y +     ++   
Sbjct: 4   KLDSIEERYAEIEQELSSSDVLQDQQRYAELAKAHADLGEIISVYREYKEVLTGIEENQD 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           V+ D   D E+R+LA+ E+ A+E    EL   +  LLLPKD  DDK+ ILEIRAGTGG E
Sbjct: 64  VLSD--GDQELRELAKEELSALETRQEELHARLQKLLLPKDPMDDKNIILEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALFV DL RMY RYA    WKVE+++S     GG KE++A+ISG  V+SR+K+ESGVHR
Sbjct: 122 AALFVADLLRMYTRYAETMHWKVELMNSHPTGSGGMKEVIASISGASVYSRLKYESGVHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP+TE+ GR+HTSA TVA+LPEA E+DV+I   ++RID  RASG GGQ VNTTDSAV
Sbjct: 182 VQRVPSTESQGRIHTSAVTVAILPEAEEVDVEIDPSELRIDYFRASGPGGQSVNTTDSAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIP+G++V    EKSQH+N+ +AMKVLR+R+   +++    E  A+R+ Q+GSGDRS
Sbjct: 242 RITHIPSGVVVSCQDEKSQHKNKAKAMKVLRSRILKAKQEEAKKELDASRRSQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGRITDHRINLTLY LE VL G +D++I PL+   QA+ + + +E
Sbjct: 302 ERIRTYNFPQGRITDHRINLTLYSLENVLAGNMDEVIEPLVQHDQAEALRAQAE 355


>gi|160940109|ref|ZP_02087454.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436689|gb|EDP14456.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
           BAA-613]
          Length = 358

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 256/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+   + E+ L + +         + +L +E A ++PI+     Y Q KQ+ +D  
Sbjct: 3   DKLDDMLIHYEELMLMLGDPDVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R++A+ E+    K I +LE+E+  LLLPKD +DDK+ ILEIRAG GG 
Sbjct: 63  ALLEEESD-EEMREMAKEELSDARKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  YA  ++WKVE++S ++N  GG+KE+VA ++G+G +S++K+ESGVH
Sbjct: 122 EAALFAAELYRMYSNYADSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAV+PEA E+DV I + D RID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQSSEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYK++ ++ G I ++++ L+ A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQAAKLARMNE 356


>gi|184154903|ref|YP_001843243.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
 gi|238692951|sp|B2GAT1|RF1_LACF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183226247|dbj|BAG26763.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
          Length = 360

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 243/353 (68%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E  ++   + K + Y +  Q  +D  
Sbjct: 6   DKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKDDT 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD ++ ++ + E+   ++   +L++E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 66  EMLREE-SDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+ MY RYA  + W VEV+  ++ + GG+KEI   I+G  V+S++KFE+G H
Sbjct: 125 EASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE++GRVHTS ATV V+PEA ++DVD+  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 185 RVQRIPATESAGRVHTSTATVGVMPEAEDVDVDLDPKDIRVDVYRSSGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L+AR+YD  +++  +E  A RK  IG+GDR
Sbjct: 245 VRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQQEQSEYDAQRKNAIGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +++II  L+ A QA+ +   
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQAQKLEQL 357


>gi|166710803|ref|ZP_02242010.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 361

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 169/363 (46%), Positives = 245/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+ A +  + EL+ ++  LL+P+D  DD +  LE+R
Sbjct: 61  DLSAAEAM----RTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++ EA +++  +    D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIAEADDVEEIVINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L D ER + A  ++  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSKAAAAQAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQADELAR 356

Query: 355 ASE 357
            S+
Sbjct: 357 LSD 359


>gi|205352556|ref|YP_002226357.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690491|sp|B5R924|RF1_SALG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|205272337|emb|CAR37217.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627616|gb|EGE33959.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 360

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 249/355 (70%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  H A ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHLADLLAALSE 358


>gi|168334105|ref|ZP_02692318.1| peptide chain release factor 1 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 356

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 163/352 (46%), Positives = 238/352 (67%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            QI +L  +F  I  +++E   +     +  L +E + +SPI+ K   Y        D  
Sbjct: 3   DQIKELVVKFENISAKVNEPAVIADQVTWRALMKEISTLSPIVEKYKEYKTVLTAIDDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D ++  L + E+   +K +  LE E+  LLLP D +D+K+ I+EIR G GG 
Sbjct: 63  LMLEEKLDD-DMLALVKEELSDNKKRVEPLEEELKILLLPTDPNDEKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DL+RMY R+A   KWK E++  ++N  GG+KE +  + G G +SR+K+ESGVH
Sbjct: 122 EAALFAADLYRMYHRFAERSKWKTELMDINENGIGGFKEAIFMLKGDGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS  TVA++PEA ++DV++   D+++D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRVPDTESSGRIHTSTVTVAIMPEAEDVDVEVNPNDVKVDVFRSSGNGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    EKSQ +N+ +AMKVLRA+LY++E  +     +A +K Q+G+GDR
Sbjct: 242 VRLTHLPTGIVVSCQDEKSQLKNKDKAMKVLRAKLYELELNKQKALIAAEKKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYNF QGR+TDHR+ LT++KLE VL G +++II+ L T  Q + + +
Sbjct: 302 SERIRTYNFPQGRVTDHRVGLTVHKLEQVLDGDLEEIISTLTTFDQTEKLKN 353


>gi|120612308|ref|YP_971986.1| peptide chain release factor 1 [Acidovorax citrulli AAC00-1]
 gi|166223521|sp|A1TTC4|RF1_ACIAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120590772|gb|ABM34212.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax
           citrulli AAC00-1]
          Length = 360

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 166/361 (45%), Positives = 238/361 (65%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S    +     Y  ++ E+A ++ +  + + Y Q++ 
Sbjct: 1   MKPFLRSQLERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQVAGRYTRYRQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ D+A+ E+ A E E+ +LE+E+  LLLP+D D+ ++  LEIR
Sbjct: 61  DLAGAREML----DDPDMADMAREEIAAAEAELVQLEDELQRLLLPRDPDEARNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYAA   WKVE+LS+SDN+ GGYKE+V  + G GV+  ++
Sbjct: 117 AGTGGDESALFAGDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PE  E         D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A + +A RK 
Sbjct: 237 INKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYNF QGR+TDHRINLTLYKL  +++G + +++  L  A +A+++   
Sbjct: 297 LVGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAIMEGDLGEVLEALRHAREAELLAEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|297588765|ref|ZP_06947408.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
 gi|297574138|gb|EFH92859.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
          Length = 355

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 249/354 (70%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  + ++F ++E+++++   +   + + KL +E+A + P+++K   Y    +  ++  
Sbjct: 3   ENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G    DSE+ +L + E+  +E++I + + ++  LLLPKD +D+K+  +EIRAG GG 
Sbjct: 63  EMLG-TTGDSEMEELLKDEISTLEEQIEKDQEDLKILLLPKDPNDEKNVFIEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF G+L RMY+ Y+  ++W  E++       GG KE+V  + G+G +SR+K+ESGVH
Sbjct: 122 EAGLFAGELLRMYQMYSDKKRWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPEA ++DV I  +D+RID  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPQTESSGRIHTSTATVAVLPEAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG++V    EKSQ +N+ +AMKVL++RLYD+  +    +R+  RK Q+G+GDR
Sbjct: 242 VRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKNKDRADARKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGRITDHRIN T+++L+  L G I+++I+ L +  QA+ +   +
Sbjct: 302 SERIRTYNFPQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQAEKLKMMN 355


>gi|256850891|ref|ZP_05556280.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
 gi|260661105|ref|ZP_05862019.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
 gi|282934197|ref|ZP_06339475.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|297205768|ref|ZP_06923163.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
 gi|256615953|gb|EEU21141.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
 gi|260548042|gb|EEX24018.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
 gi|281301811|gb|EFA94077.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|297148894|gb|EFH29192.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
          Length = 362

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 240/354 (67%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L  R+ EI+  M++   ++    Y+++++E A +  ++ K   Y + ++   D   
Sbjct: 7   QLEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISDNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I ++ SD ++ ++A+ E   +EKE+ ELE EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  II-ENESDEDLVEMAKEENSDLEKEVAELEEEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WK+ V+     + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +        RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQASYDEKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II+ L+  +Q K +   +E
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIISALIVHYQTKQLEELAE 359


>gi|196229467|ref|ZP_03128332.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428]
 gi|196226699|gb|EDY21204.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428]
          Length = 360

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 155/351 (44%), Positives = 228/351 (64%), Gaps = 6/351 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I     RF E+E  +S S   D   K      E+  +  +++     ++ + +  +   +
Sbjct: 7   ISKKAERFRELEAEISSSNLYDDPRKARETLREHTRLKELLANWETLNKTRAQLTENQDL 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D E+ ++A +E+  +EK I + E  + + LLP D ++D+  I+EIR GTGG EA
Sbjct: 67  AK--GEDKEMAEMAAMEIPDLEKRIADTETAVQFALLPPDPNEDRDAIVEIRGGTGGDEA 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF  DL+RMY R+A    +K+E L +S  + GG KE++  ++G  VF  +++ESGVHRV
Sbjct: 125 ALFAADLYRMYTRFAETHGFKLEPLEASVGELGGMKEVIFKVTGDQVFRTLRYESGVHRV 184

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVPATEA GR+HTS ATVAVLPEA E+D+++  ++IRI+  RA G GGQ VNTTDSAV+
Sbjct: 185 QRVPATEAQGRIHTSTATVAVLPEAEEVDLELKADEIRIEVCRAGGPGGQGVNTTDSAVQ 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + HIPTG +V     +SQ +N+ +A+ +LR+RL +V+++  A + +A RK QIG+GDRSE
Sbjct: 245 VMHIPTGTIVRCQDGRSQQKNKEKALTILRSRLLEVKQREEAEKYAAQRKGQIGTGDRSE 304

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +IRTYNF Q R+TDHRINLTLY L+  ++G ID++I  L  A   + +  A
Sbjct: 305 KIRTYNFPQNRVTDHRINLTLYNLDSFIEGNIDEMIGSLQAADMQERLAEA 355


>gi|310767482|gb|ADP12432.1| peptide chain release factor 1 [Erwinia sp. Ejp617]
          Length = 360

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+E  + ++  +     +  L+ EYA ++ +      + Q +++      
Sbjct: 8   KLEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++G    D+E+R++AQ E+ A      EL+ ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  MLG----DAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+WKVEV+S+++ + GGYKE++A + G G + R+KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  DI   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL +R+   E  R   E S+ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLT+Y+L+  ++G +D +I P++  +QA  + + S
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTIYRLDEAMEGKLDALIEPIVQEYQADQLAALS 357


>gi|257870909|ref|ZP_05650562.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
 gi|257805073|gb|EEV33895.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
          Length = 357

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 242/353 (68%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   +     +++L++E A     +     Y +  +  +D  
Sbjct: 3   DQLQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+ N D+E+ ++A+ E+  ++KE   LE+ I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLGE-NLDAEMAEMAKEELSDLKKEKDVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++YA  + WKVEV+ ++    GGYKE++  ISG  V+S++K+ESG H
Sbjct: 122 EAALFAGDLFNMYQKYAETQGWKVEVMDANVTGIGGYKEVIMMISGENVYSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++DI  +DIR D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVEIDIADKDIRTDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMKVLRAR+YD  ++   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEARSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L G +D+II+ L+   Q   +   
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALIMYDQTSKLEEM 354


>gi|238756935|ref|ZP_04618123.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
 gi|238704765|gb|EEP97294.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
          Length = 360

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 171/362 (47%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTHCFKEWRSMQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIDAAEMMLE----DPEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+SD + GGYKE++A +SG GV+ ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASDGEHGGYKEVIAKVSGDGVYGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAVASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|169824785|ref|YP_001692396.1| peptide chain release factor 1 [Finegoldia magna ATCC 29328]
 gi|303235021|ref|ZP_07321645.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
 gi|238687758|sp|B0S2B6|RF1_FINM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167831590|dbj|BAG08506.1| bacterial peptide chain release factor 1 [Finegoldia magna ATCC
           29328]
 gi|302493876|gb|EFL53658.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
          Length = 355

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 248/354 (70%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  + ++F ++E+++++   +   + + KL +E+A + P+++K   Y    +  ++  
Sbjct: 3   ENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G    DSE+ +L + E+  +E++I + + E+  LLLPKD +D+K+  +EIRAG GG 
Sbjct: 63  ELLG-TTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF G+L RMY+ Y+  + W  E++       GG KE+V  + G+G +SR+K+ESGVH
Sbjct: 122 EAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPEA ++DV I  +D+RID  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPQTESSGRIHTSTATVAVLPEAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG++V    EKSQ +N+ +AMKVL++RLYD+  +    +R+  RK Q+G+GDR
Sbjct: 242 VRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKNKDRADARKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGRITDHRIN T+++L+  L G I+++I+ L +  QA+ +   +
Sbjct: 302 SERIRTYNFPQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQAEKLKMMN 355


>gi|255007722|ref|ZP_05279848.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
 gi|313145421|ref|ZP_07807614.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
 gi|313134188|gb|EFR51548.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
          Length = 370

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 147/362 (40%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E+   +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYMQLLANIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD+++R++A+ E+   ++ +  LE EI  LL+P D  D K+ ILEIR GTGG 
Sbjct: 69  DILS-NESDTDMREMAKEEMDNSQERLPVLEEEIKLLLVPADPQDGKNAILEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++   + WK+EV S+++   GGYKEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +I            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I + I+ L  A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|301299965|ref|ZP_07206192.1| peptide chain release factor 1 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852447|gb|EFK80104.1| peptide chain release factor 1 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 360

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 235/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L++R+ E+   +S+   +     + KL++E   +   + K + Y +  Q+  D  
Sbjct: 6   DRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMVDLRETVEKYNKYKEVTQQISDDE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+  L + E+   + E  +LE EI  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 66  EMLSDGLDD-EMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DLF MY +YA  + W +EV+  +  + GG+KEI   I+G  V+S++K+ESG H
Sbjct: 125 EASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE++GRVHTS ATV V+PE  ++++++  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 185 RVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    ++SQ QNR +AMK+L+AR+YD   ++  +E  ANRK  +G+GDR
Sbjct: 245 VRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ Q R+TDHRI L+L KL+ ++ G ++D+I+ L+   Q K +    
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQTKAMEKLE 358


>gi|295094043|emb|CBK83134.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus sp.
           ART55/1]
          Length = 358

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 252/355 (70%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ +L ++   I  ++++   V   + + KL +E + +SPI+ K   Y   K   +D  
Sbjct: 3   DRLEELVDKLDTINNQLTDPDVVSDQNKFRKLMKEQSDLSPIVEKYHEYKDAKTTIEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             I +  SD E+R++A+ E+   +  +  +E E+  LLLPKD +D K+ I+EIRAG GG 
Sbjct: 63  E-ILEEESDEELREMAKEEMNEAKANLETIEQELKILLLPKDPNDSKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY++Y    KWKVE++S ++N  GG+KE V  I+G G +S+MK+ESGVH
Sbjct: 122 EAALFAYEVYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GR+HTS  TVAV+PEA E+DV+I   DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPKTESGGRIHTSTITVAVMPEAEEVDVEINENDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++ + +EKSQ QN+ +A  +LR++LYD+E ++  +  +A+R+ QIG+GDR
Sbjct: 242 VRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF +GR+TDHRI LTLYKL+ ++ G ++++I+ L+ A Q   +   +E
Sbjct: 302 SEKIRTYNFPEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQTAKLAQVNE 356


>gi|198276935|ref|ZP_03209466.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135]
 gi|198270460|gb|EDY94730.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135]
          Length = 369

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 148/362 (40%), Positives = 228/362 (62%), Gaps = 14/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L +RF E+   +++   +     Y+KLT+EY  +  +++    Y Q     ++  
Sbjct: 9   EKLEGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELGDLMAARKEYLQCINGLEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D E++++A+ E  + E  I ELE EI  LL+P D  DD++ ILEIR GTGG 
Sbjct: 69  MMMSE--NDPEMKEMAREEAASCEARIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY +Y   + WK+EV S+++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 127 EAAIFAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGEKVYGTLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA   DV+I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 187 RVQRVPATETQGRVHTSAASVAVLPEAEPFDVEINEGEIKWDTFRSGGAGGQNVNKVESG 246

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 247 VRLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRK 306

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 307 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 366

Query: 355 AS 356
           + 
Sbjct: 367 SE 368


>gi|37525987|ref|NP_929331.1| peptide chain release factor 1 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|46576710|sp|Q7N586|RF1_PHOLL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|36785417|emb|CAE14363.1| Peptide chain release factor 1 (RF-1) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 360

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 246/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+   + ++  +     +  L+ EYA ++ + +    +   + + +    
Sbjct: 8   KLEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTNCFKAWSAVQDDLKAAEI 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEEIRDAKVRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+WKVEV+S++D + GGYKEI+A +SG  V+  +KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAESRRWKVEVISANDGEHGGYKEIIAKVSGEQVYGHLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAVLPE  + +  +I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVLPEIPDAELPEISPSDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+  +GSGDR
Sbjct: 244 IRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQEAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D ++ P++  +QA ++ + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVIEGKLDMLVQPIVNEYQADLLSALSE 358


>gi|51473710|ref|YP_067467.1| peptide chain release factor 1 [Rickettsia typhi str. Wilmington]
 gi|61214605|sp|Q68WK7|RF1_RICTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51460022|gb|AAU03985.1| peptide chain release factor 1 (RF-1) [Rickettsia typhi str.
           Wilmington]
          Length = 355

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 247/355 (69%), Gaps = 2/355 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  I+ KI  Y++ K E ++ 
Sbjct: 1   MSFSDNLVKILDKYENLGRKLSSGIIGDEFVKASKEYAELEDIVVKIKEYNKVKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           + +  +   D+   ++   E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNLRLEVALDNATLEMINNEIYILENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA  + W+ E+L+ S+   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAEFKGWRFEILAISNTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA  +D+ I  +D+RIDT R+SG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEGVDIKIEDKDLRIDTYRSSGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRARLY+ +R++   ERS +R+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQERSDSRRWQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQ-GYIDDIINPLLTAHQAKMIGSA 355
           RSERIRTYNF  GR++DHRINLTLYK++ V++ G +D+ I  L+   +AK +   
Sbjct: 301 RSERIRTYNFLHGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIANDEAKKLSEL 355


>gi|86140561|ref|ZP_01059120.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217]
 gi|85832503|gb|EAQ50952.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217]
          Length = 360

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 154/359 (42%), Positives = 230/359 (64%), Gaps = 5/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            L  +++  +K RF E+   + +   +     Y++L +EY  +  ++ +   Y +  Q  
Sbjct: 1   MLMLERLNFIKQRFDEVSDLIIQPDIISDQKRYVELNKEYKDLRALMDERENYIKHTQRI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++   +I D  SD E+ ++A++++   ++ +  LE +I ++L+PKD +D K+ ++EIRAG
Sbjct: 61  EEAEEIIAD-GSDPEMTEMAKLQLEEAKEAMPALEEKIRFMLVPKDPEDAKNAVMEIRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA++F GDL+RMY +Y   + W+   +  S+   GGYKEI   ++G  V+  ++FE
Sbjct: 120 TGGDEASIFAGDLYRMYMKYCESKGWRTSTIDYSEGTSGGYKEIQVEVTGEDVYGTLRFE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           +GVHRVQRVP TE  GRVHTSAATV V PEA E DV+I  +D+RID   +SG GGQ VNT
Sbjct: 180 AGVHRVQRVPQTETQGRVHTSAATVMVFPEAEEFDVEIDPKDVRIDYFCSSGPGGQSVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH PTG++     +KSQH+N+ +A KVLR+RLYD+E  +   E +A R   + 
Sbjct: 240 TYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRGSMVT 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRS +IRTYN+ QGR+TDHRINLTLY L  ++ G I  II+ L      + +    +
Sbjct: 300 SGDRSAKIRTYNYPQGRVTDHRINLTLYDLANIIDGDIQKIIDELQLVSNTEKLAEGGD 358


>gi|156742398|ref|YP_001432527.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
 gi|156233726|gb|ABU58509.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
          Length = 364

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 152/363 (41%), Positives = 223/363 (61%), Gaps = 8/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQ 57
           M      ++  +  R+ E+   M++       ++L     E   + P++     Y   ++
Sbjct: 1   MAAALIDKLASITARYDELLDLMAQPDVATDPVRLQRYAREQRELEPLVEAYRAYRDVER 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +D   ++ +H +D ++R LAQ E+  + +   +LE +I  LLLP+D +D K+ I+E+R
Sbjct: 61  QIEDTSFLL-EHETDQDVRQLAQDELDHLLERRAQLEQQIKVLLLPRDPNDSKNAIMELR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
            G GG EAALF  DLFRMY RYA  R W +EV+S+++N  GGYKEI+  + G G +SR+K
Sbjct: 120 QGEGGDEAALFAADLFRMYTRYAEQRGWDIEVISATENGPGGYKEIIFEVRGEGAYSRLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +E GVHRVQRVPATEA GR+HTS ATVAVLPE  E D+++   D R+D  R+ G GGQ V
Sbjct: 180 YEGGVHRVQRVPATEARGRIHTSTATVAVLPEVEETDIELNPSDYRVDVFRSGGHGGQGV 239

Query: 238 NTTDSAVRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           NTTDSAVRI + P      ++     +SQ +N+  A+ VLRARLY  E ++   E    R
Sbjct: 240 NTTDSAVRIVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRRKELGETR 299

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
             Q+G+G+R+E+IRTYNF Q R+TDHRI      L  +L G +D +I+ L+ A  A+ + 
Sbjct: 300 LAQVGAGERAEKIRTYNFPQDRVTDHRIGQNFSNLPGILDGDLDRLIDMLIIADNAERLE 359

Query: 354 SAS 356
           S +
Sbjct: 360 SVA 362


>gi|322373126|ref|ZP_08047662.1| peptide chain release factor 1 [Streptococcus sp. C150]
 gi|321278168|gb|EFX55237.1| peptide chain release factor 1 [Streptococcus sp. C150]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 231/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I + + D ++ ++A+ E+   +    E E  +  LLLPKD +DDK+ ILEIR  
Sbjct: 61  TDAEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLNMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E+D +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVDYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|229586782|ref|YP_002845283.1| peptide chain release factor 1 [Rickettsia africae ESF-5]
 gi|259585242|sp|C3PNN0|RF1_RICAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|228021832|gb|ACP53540.1| Peptide chain release factor RF-1 [Rickettsia africae ESF-5]
          Length = 355

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 175/354 (49%), Positives = 250/354 (70%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +  ++S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 1   MRFSDNLAKILDKYENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ +R+ Q+GSG+
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGN 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ +  L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIADDEAKKLLE 354


>gi|293365352|ref|ZP_06612069.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
 gi|307703894|ref|ZP_07640835.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
 gi|291316802|gb|EFE57238.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
 gi|307622729|gb|EFO01725.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D ++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDVDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV ++PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|310779238|ref|YP_003967571.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
           polytropus DSM 2926]
 gi|309748561|gb|ADO83223.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
           polytropus DSM 2926]
          Length = 357

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 241/354 (68%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ ++  +  E+   +  S  +    KL    +    I+P++ K   Y +   + +    
Sbjct: 4   KLEEVVKKHEELTGLLGSSEVIKDPKKLIEYNKALNEITPVVEKYKEYKRYSDDLEFTKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     D E++++   E+  IE+ +  LE E+  LLLPKD +DDK+ I+EIR GTGG E
Sbjct: 64  SLKVEK-DHEMKEMLLEEMRDIEEVLPGLEQELRILLLPKDPNDDKNVIIEIRGGTGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  +L+RMY RYA   KWK EV+S S+   GG KEIV +I G+G +S++KFESGVHR
Sbjct: 123 AALFAANLYRMYCRYAERNKWKTEVMSKSEVGVGGLKEIVFSIQGQGAYSKLKFESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+SGR+HTS ATVAVLPE  +   V+I   +++IDT R+SG+GGQHVNTTDSA
Sbjct: 183 VQRVPETESSGRIHTSTATVAVLPEVDDVEQVEIKPSELKIDTFRSSGAGGQHVNTTDSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+P+G++V    E+SQ +NR +AMKVL  +L+++E ++  +E  + RKLQ+G+G R
Sbjct: 243 VRITHLPSGVIVECQDERSQLKNREKAMKVLATKLFEMEIEKQRSEVESTRKLQVGTGSR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+ QGRITDHRI LTL+KL+  L G + ++I+ L+T  QA M+ + +
Sbjct: 303 SEKIRTYNYPQGRITDHRIKLTLHKLDAFLDGDLTEMIDALITFDQADMLTNLA 356


>gi|283478591|emb|CAY74507.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
           12163]
          Length = 363

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  E+E  + ++  +     +  L+ EYA ++ +      + Q +++      
Sbjct: 11  KLEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEM 70

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++G    D+E+R++AQ E+ A      EL+ ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 71  MLG----DAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+WKVEV+S+++ + GGYKE++A + G G + R+KFESG HR
Sbjct: 127 AAIFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  DI   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 187 VQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSA 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +A+ VL +R+   E  R   E S+ R+  +GSGDR
Sbjct: 247 IRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S+R RTYNF QGR+TDHRINLT+Y+L+  ++G +D +I P++  +QA  + + S
Sbjct: 307 SDRNRTYNFPQGRVTDHRINLTIYRLDEAMEGKLDALIEPIVQEYQADQLAALS 360


>gi|260891992|ref|YP_003238089.1| peptide chain release factor 1 [Ammonifex degensii KC4]
 gi|260864133|gb|ACX51239.1| peptide chain release factor 1 [Ammonifex degensii KC4]
          Length = 355

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 183/354 (51%), Positives = 253/354 (71%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ +L+ +F ++ L++++   +     + +  + +A + PI+S    Y +  +  ++  
Sbjct: 3   EKLAELETQFEDLTLKIADPEVMADQKRWREYVKRHAELEPIVSTYREYKRVLEGIEEA- 61

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+R+LA+ E+  +++   ELE E+  LLLPKD +D+K+ ILEIRAGTGG 
Sbjct: 62  EMLLDQEQDEELRELAEEELETLKERREELEKELKILLLPKDPNDEKNVILEIRAGTGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DL RMY RYA  R WK E+LS+S  D GG+KE+V  I GRG +S +K+ESGVH
Sbjct: 122 EAALFAADLLRMYLRYAEKRGWKTELLSASPTDLGGFKEVVVLIEGRGAYSFLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEASGR+HTSAATVAVLPEA E+DV+I  +DIR+DT  +SG GGQ VNTT SA
Sbjct: 182 RVQRVPVTEASGRIHTSAATVAVLPEAEEVDVEIDPKDIRVDTFCSSGHGGQSVNTTYSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    E+SQ +NR +AMKVLRARL D++R+      +A R+ Q+ SGDR
Sbjct: 242 VRITHLPTGIVVTCQDERSQLKNREKAMKVLRARLLDLKRREQEAAIAAERRAQVKSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SER+RTYNF Q R+TDHRINLTLY+LE +L+G +D++I  L  A QA+ +   S
Sbjct: 302 SERVRTYNFPQNRVTDHRINLTLYRLEEILEGDLDELITALAAADQAERLRQIS 355


>gi|256848019|ref|ZP_05553463.1| peptide chain release factor 1 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715079|gb|EEU30056.1| peptide chain release factor 1 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 362

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 238/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E  ++   + K   Y +  Q  +D  
Sbjct: 8   DKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYHQYQKVTQTIKDDE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+ ++ + E+ + ++E  +L +E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 68  ELLRDTKDD-ELIEMTKEELASSKEEQDQLAHELEVLLIPKDPNDDKNIIMEIRGAAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF GDL+ MY  YA  + W VE++  ++ + GG+KEIV  ISG  V+S++KFE+G H
Sbjct: 127 EASLFAGDLYNMYLHYAEKQGWNVEIVDKTETEVGGFKEIVLMISGDKVYSKLKFENGAH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE++GRVHTS ATV V+PEA ++ +D+  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 187 RVQRIPVTESAGRVHTSTATVGVMPEAEDVQIDLDPKDIRVDVYRSSGAGGQHINKTSSA 246

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L+AR+YD  +++  +     RK  IG+GDR
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKARVYDYYQQKEQSAYDQKRKDAIGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II  L+ A Q K +   
Sbjct: 307 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMDGDLDEIIEALIIADQTKKLEQL 359


>gi|319790214|ref|YP_004151847.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
 gi|317114716|gb|ADU97206.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
          Length = 365

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 180/354 (50%), Positives = 249/354 (70%), Gaps = 5/354 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDL 62
             ++  +  +F EIE  + +   +    K   L +E+  + PI      Y + +Q  ++ 
Sbjct: 6   ESRLEKIAKKFKEIEENLGKPEVIADQKKFQTLAKEHKELQPIYDTYMEYKKTRQGIEEA 65

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              I +   + E+ +LA+ E   +EK   ELE E+  LL+PKD +D+K+ ILEIRAG GG
Sbjct: 66  LE-IIEAGEEEELVELAKEEKKELEKRAEELEGELKKLLIPKDPNDEKNVILEIRAGAGG 124

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DLFRMY RYA  + WKVE+LS ++   GG KE+VATISG+G +SR+K+ESGV
Sbjct: 125 EEAALFAQDLFRMYCRYAERKGWKVEILSMNETGLGGIKEVVATISGKGAYSRLKYESGV 184

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQR+P TE+ GR+HTS ATVA+LPEA E++++I   D++IDT R+SG+GGQHVNTTDS
Sbjct: 185 HRVQRIPVTESGGRIHTSTATVAILPEAEEVEIEIKESDLKIDTYRSSGAGGQHVNTTDS 244

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V  S+E+SQ QNR++AMK+LRARL ++  ++   +  + RK Q+GSGD
Sbjct: 245 AVRITHLPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQKEKMDSARKAQVGSGD 304

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           RSE+IRTYNF +GR+TDHRI LTLY L+  L G +D++I+ L  A QAK I + 
Sbjct: 305 RSEKIRTYNFPEGRVTDHRIKLTLYNLQEFLDGDLDEMIDALAAAEQAKKIEAL 358


>gi|296113010|ref|YP_003626948.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|295920704|gb|ADG61055.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|326560389|gb|EGE10771.1| peptide chain release factor 1 [Moraxella catarrhalis 7169]
 gi|326561241|gb|EGE11604.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1]
 gi|326564062|gb|EGE14306.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1]
 gi|326565872|gb|EGE16034.1| peptide chain release factor 1 [Moraxella catarrhalis BC1]
 gi|326570557|gb|EGE20597.1| peptide chain release factor 1 [Moraxella catarrhalis BC8]
 gi|326573200|gb|EGE23169.1| peptide chain release factor 1 [Moraxella catarrhalis CO72]
 gi|326576112|gb|EGE26028.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1]
 gi|326577062|gb|EGE26956.1| peptide chain release factor 1 [Moraxella catarrhalis O35E]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 170/361 (47%), Positives = 245/361 (67%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  + +RF E+   +S+  ++     + +L+ E++ +S I +    + Q + 
Sbjct: 1   MKESLRHRLDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q  + ++    SD E++++A  E+      I  LE  +N ++LPKD +D  +  LEIR
Sbjct: 61  DLQTANELL----SDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY++Y   + W+VEVLS+++ + GGYKEI+A +SG GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+PE    D  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTG++     E+SQH N+ +AMK+L AR+   + +   +  S  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQAQIDATSDMRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G + ++++ LL  H A ++ S 
Sbjct: 297 LVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLLREHHADLMASV 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|238751561|ref|ZP_04613052.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
 gi|238710279|gb|EEQ02506.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
          Length = 360

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DLEAAEMMLE----DLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A +SG GVF R+K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAESRRWKVEIMSASEGEHGGYKEVIAKVSGEGVFGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|242280071|ref|YP_002992200.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
 gi|259585219|sp|C6BYQ4|RF1_DESAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|242122965|gb|ACS80661.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
          Length = 357

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 177/354 (50%), Positives = 250/354 (70%), Gaps = 6/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ D++  F ++E  +++    +    Y K+T  +A +  +++    Y Q   + +D   
Sbjct: 4   KLEDIERSFMDLEQELADPEVYNNQERYRKVTMAHAELGDVVAAFREYKQLSADLEDNKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D  SD EIR++A++E+  I+  + +LE E+  LLLPKD  D K+ ILEIRAGTGG E
Sbjct: 64  MAKD--SDPEIREMAEMEIAEIKDRLPKLEEELKLLLLPKDPMDGKNIILEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY R+A    WKVEV++S+    GG+KEI+A ISG  ++S MK+ESG HR
Sbjct: 122 AALFAADLFRMYSRFAESNGWKVEVMNSNPTGTGGFKEIIAAISGSRIYSMMKYESGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GR+HTSAATVA++PEA E+DV +  ED+RID  RASG GGQ VNTTDSA+
Sbjct: 182 VQRVPATETQGRIHTSAATVAIMPEAEEVDVQVRNEDLRIDVFRASGPGGQSVNTTDSAI 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTG++V    EKSQH+N+ +AMKVL +RL   E+ +   E +  R+ Q+GSGDRS
Sbjct: 242 RITHLPTGLVVICQDEKSQHKNKAKAMKVLCSRLLQAEQDKQHAEMAEQRRAQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYNF QGR+TDHRINLTLYKL+ V++G + +++  L++ +Q++ +   ++
Sbjct: 302 ERIRTYNFPQGRVTDHRINLTLYKLDAVIEGDMQELVESLISHYQSEALKQQAQ 355


>gi|125623422|ref|YP_001031905.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166223566|sp|A2RIR4|RF1_LACLM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|124492230|emb|CAL97159.1| peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070169|gb|ADJ59569.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 357

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 227/354 (64%), Gaps = 4/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +  R+ E+   +S+   V     +++L+ E A +   ++  + Y +  +   D  
Sbjct: 3   DQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISDSE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E++++ + E+ + + +   LE EI  LLLPKD +D K+ ILEIR   GG 
Sbjct: 63  EMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL  MY+ ++  + WK E++ ++    GGYKE+ A ISG  V+S++K+ESG H
Sbjct: 123 EAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTS ATV V+PE  E ++ I  +D+R+D   ASG+GGQ+VN   +A
Sbjct: 183 RVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIEQKDLRVDIYHASGAGGQNVNKVATA 242

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V    E++Q +NR +A+K+L  +++D  ++   ++++  RK  +G+GDR
Sbjct: 243 VRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNTERKSTVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K +   +
Sbjct: 303 SERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEELN 356


>gi|296137058|ref|YP_003644300.1| peptide chain release factor 1 [Thiomonas intermedia K12]
 gi|295797180|gb|ADG31970.1| peptide chain release factor 1 [Thiomonas intermedia K12]
          Length = 358

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 157/352 (44%), Positives = 229/352 (65%), Gaps = 9/352 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  ++ R  E++  ++       +  +  +T E A +  ++     Y  K +
Sbjct: 1   MKPSLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKAKTE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +     +++    SD ++++LAQ E+      +  LE ++   LLP+D DD ++  +EIR
Sbjct: 61  DLSQAESLL----SDPDMKELAQQEIQDARAALDALEAQLQVALLPRDPDDSRNVFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL RMY RYA  ++W  EV+S S +D GGYKE++  ++G G +  +K
Sbjct: 117 AGTGGEESALFAADLLRMYARYAERKRWATEVISESPSDLGGYKEVILRVAGEGAYGLLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           +ESG HRVQRVP TE  GR+HTSAATVAV+PE  E   + I   D+RIDT RASG+GGQH
Sbjct: 177 YESGGHRVQRVPKTETQGRIHTSAATVAVMPEMDEAQAIQINPSDLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITH+PTG++V    E+SQH+N+ RA+ VL ARL + ER+    E +A RK 
Sbjct: 237 INKTDSAIRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQSRQAEEAATRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +GSGDRS+RIRTYNF QGR+++HRINLTLYK++ +L G +D+++  L T  
Sbjct: 297 LVGSGDRSDRIRTYNFPQGRVSEHRINLTLYKIDAILDGDLDELLTALRTED 348


>gi|149019616|ref|ZP_01834935.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
 gi|168483091|ref|ZP_02708043.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC1873-00]
 gi|147930991|gb|EDK81971.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
 gi|172043551|gb|EDT51597.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC1873-00]
 gi|301799986|emb|CBW32576.1| peptide chain release factor 1 [Streptococcus pneumoniae OXC141]
 gi|332200609|gb|EGJ14681.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41317]
          Length = 359

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 157/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    +     Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ +LA+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|289167970|ref|YP_003446239.1| peptide chain release factor I [Streptococcus mitis B6]
 gi|288907537|emb|CBJ22374.1| peptide chain release factor I [Streptococcus mitis B6]
          Length = 359

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSETKRFMELSKEEASSRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|21910335|ref|NP_664603.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS315]
 gi|28895910|ref|NP_802260.1| peptide chain release factor 1 [Streptococcus pyogenes SSI-1]
 gi|25091126|sp|Q8K7I2|RF1_STRP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21904531|gb|AAM79406.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           MGAS315]
 gi|28811160|dbj|BAC64093.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           SSI-1]
          Length = 359

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 162/358 (45%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESLN 358


>gi|325914250|ref|ZP_08176600.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325539505|gb|EGD11151.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 361

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 170/363 (46%), Positives = 245/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPDVVNNNDKFRSLSRELSQLEPVAIALEDEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+ A +  + EL+ ++  LL+P+D  DD +  LE+R
Sbjct: 61  DLSAAEAM----RNDPEMRELAEEEIAAAQARLDELDAQLALLLVPRDPRDDGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +I+  +    D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDIEEIVINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L + ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSKAAAAEAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQADELAR 356

Query: 355 ASE 357
            S+
Sbjct: 357 LSD 359


>gi|114561906|ref|YP_749419.1| peptide chain release factor 1 [Shewanella frigidimarina NCIMB 400]
 gi|119361604|sp|Q087I4|RF1_SHEFN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114333199|gb|ABI70581.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           frigidimarina NCIMB 400]
          Length = 361

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 159/362 (43%), Positives = 242/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+   +S++  +   D +  L++EY+ +  ++S    + Q ++
Sbjct: 1   MKESVIRKLEGLLERNEEVLALLSDATVISDQDRFRGLSKEYSQLEDVVSSFKAFQQAQK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D E+R++AQ E    ++ + +LE+E+  LLLP D +DD +  LEIR
Sbjct: 61  DFDYAKEML--EEDDLEMREMAQDEYKQSKQVLEKLEDELQVLLLPTDPNDDTNAFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDL+RMY RY    +W++EV++ ++ + GG+KEI+  ISG G + ++K
Sbjct: 119 AGAGGDEAAIFAGDLYRMYSRYCEANRWQMEVMNVNEGEHGGFKEIIVKISGDGAYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TV VL E  E +   I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRVHTSACTVVVLHEVPEAEAISINAADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIP+GI+V    ++SQH+NR +AM VL AR+  VE ++  +     R+ 
Sbjct: 239 VNKTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEETTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYN+ QGR++DHRINLTLY+L  V++G ++ +++P++  HQA M+ + 
Sbjct: 299 LVASGDRSERIRTYNYPQGRVSDHRINLTLYRLNEVMEGDLNVLLDPIMLEHQADMLAAL 358

Query: 356 SE 357
           ++
Sbjct: 359 AD 360


>gi|281491061|ref|YP_003353041.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           KF147]
 gi|281374819|gb|ADA64339.1| Peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
           lactis KF147]
          Length = 357

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 228/354 (64%), Gaps = 4/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +  R+ E+   +S+   V     +++L+ E A +   ++  + Y +  +   D  
Sbjct: 3   DQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLCDKVATYNDYKKVLETISDSE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D +++++ + E+ + + +   LE EI  LLLPKD +D K+ ILEIR   GG 
Sbjct: 63  EMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL  MY+ ++  + WK E++ ++    GGYKE+ A ISG  V+S++K+ESG H
Sbjct: 123 EAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTS ATV V+PE  E ++ I  +D+R+D   ASG+GGQ+VN   +A
Sbjct: 183 RVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIDQKDLRVDIYHASGAGGQNVNKVATA 242

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V    E++Q +NR +A+K+L  +++D  ++   ++++A RK  +G+GDR
Sbjct: 243 VRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K +   +
Sbjct: 303 SERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEELN 356


>gi|70725918|ref|YP_252832.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
 gi|119361616|sp|Q4L7Z9|RF1_STAHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68446642|dbj|BAE04226.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 358

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 249/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V+   KL   ++E A +   +     Y  KK+E  ++ 
Sbjct: 3   DQLDIVEERYEQLNEMLSDPEIVNDSDKLRKYSKEQADLQKTVDVYRDYKSKKEEIAEID 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E  ++ + E  +++  I ELE ++ +LL+PKD +D+K  I+EIRA  GG 
Sbjct: 63  EMLNETE-DKEEIEMLKEESASLKSAIPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDL RMY +YA  + +K E++ ++++D GGYKEI  ++SG G +S++KFE+G H
Sbjct: 122 EAAIFAGDLLRMYSKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PTG++ TSSEKSQ QNR +A+KVL+ARLYD++ +    + +A RK  +G+GDRS
Sbjct: 242 VRITHLPTGVIATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ER+RTYN+ Q R+TDHRI LTL KL+ +++G +D+II+ L  + Q + +   +
Sbjct: 302 ERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKELN 354


>gi|253583342|ref|ZP_04860540.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725]
 gi|251833914|gb|EES62477.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725]
          Length = 358

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 245/355 (69%), Gaps = 6/355 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ ++  RF E+   +     +    K+    +  + I+PI+ K   Y +  ++   +  
Sbjct: 4   KLEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSDITPIVEKYKEYKRVIEDFDFIKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     D E++++   E+  +E+ I ELE E+  LLLPKD +DDK+ I+EIR G GG E
Sbjct: 64  NLK-TEKDQEMKEMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRGGAGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF G+LFRMY RYA  +KWK+E++   +   GG KE+V +I+G G +SR+KFESGVHR
Sbjct: 123 AALFAGNLFRMYSRYAERKKWKIEIIEKQEMGIGGIKEVVFSINGFGAYSRLKFESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE++GRVHTS ATVAVLPE  +  +V I   D++IDT R+ G+GGQHVN TDSA
Sbjct: 183 VQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHVNMTDSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    E+SQ +NR +AMK L ++L+++E ++  ++  + R+LQ+G+GDR
Sbjct: 243 VRITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECEKQRSQVESERRLQVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGRITDHRI  T+Y+LE  L G +D++I+ L+T  QA+M+ S SE
Sbjct: 303 SEKIRTYNFPQGRITDHRIKFTVYQLEAFLDGDLDEMIDALITFSQAEMLSSVSE 357


>gi|15902968|ref|NP_358518.1| peptide chain release factor 1 [Streptococcus pneumoniae R6]
 gi|116517153|ref|YP_816384.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
 gi|148994243|ref|ZP_01823536.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
 gi|148998842|ref|ZP_01826278.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
 gi|149003880|ref|ZP_01828703.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
 gi|149006296|ref|ZP_01830008.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
 gi|149012959|ref|ZP_01833848.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
 gi|168488841|ref|ZP_02713040.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
 gi|168491915|ref|ZP_02716058.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC0288-04]
 gi|168494449|ref|ZP_02718592.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC3059-06]
 gi|168576251|ref|ZP_02722145.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
 gi|182683968|ref|YP_001835715.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
 gi|221231773|ref|YP_002510925.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
           700669]
 gi|225854521|ref|YP_002736033.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
 gi|225856675|ref|YP_002738186.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
 gi|225858811|ref|YP_002740321.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
 gi|237650077|ref|ZP_04524329.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974]
 gi|237822154|ref|ZP_04597999.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|303255576|ref|ZP_07341627.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
 gi|303260464|ref|ZP_07346432.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
 gi|303262821|ref|ZP_07348758.1| peptide chain release factor 1 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303265291|ref|ZP_07351201.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
 gi|303266498|ref|ZP_07352385.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
 gi|303268383|ref|ZP_07354179.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
 gi|307067803|ref|YP_003876769.1| protein chain release factor A [Streptococcus pneumoniae AP200]
 gi|307127431|ref|YP_003879462.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
 gi|32171541|sp|Q8DPZ4|RF1_STRR6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122278730|sp|Q04KR4|RF1_STRP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691157|sp|B2IPH6|RF1_STRPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790899|sp|C1C6Z5|RF1_STRP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790900|sp|B8ZPH1|RF1_STRPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790902|sp|C1CE12|RF1_STRZJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790903|sp|C1CK98|RF1_STRZP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15458532|gb|AAK99728.1| Peptide chain release factor I [Streptococcus pneumoniae R6]
 gi|116077729|gb|ABJ55449.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
 gi|147755269|gb|EDK62320.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
 gi|147758110|gb|EDK65114.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
 gi|147762073|gb|EDK69035.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
 gi|147763112|gb|EDK70053.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
 gi|147927384|gb|EDK78415.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
 gi|182629302|gb|ACB90250.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
 gi|183572574|gb|EDT93102.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
 gi|183573754|gb|EDT94282.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC0288-04]
 gi|183575581|gb|EDT96109.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC3059-06]
 gi|183577929|gb|EDT98457.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
 gi|220674233|emb|CAR68768.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
           700669]
 gi|225720924|gb|ACO16778.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
 gi|225723680|gb|ACO19533.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
 gi|225724367|gb|ACO20219.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
 gi|301794156|emb|CBW36566.1| peptide chain release factor 1 [Streptococcus pneumoniae INV104]
 gi|301801854|emb|CBW34572.1| peptide chain release factor 1 [Streptococcus pneumoniae INV200]
 gi|302597432|gb|EFL64527.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
 gi|302636019|gb|EFL66517.1| peptide chain release factor 1 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638376|gb|EFL68843.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
 gi|302642104|gb|EFL72455.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
 gi|302643949|gb|EFL74209.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
 gi|302645156|gb|EFL75393.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
 gi|306409340|gb|ADM84767.1| Protein chain release factor A [Streptococcus pneumoniae AP200]
 gi|306484493|gb|ADM91362.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
 gi|332073352|gb|EGI83831.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17570]
 gi|332075368|gb|EGI85837.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41301]
 gi|332075634|gb|EGI86102.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17545]
 gi|332202882|gb|EGJ16950.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47901]
          Length = 359

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    +     Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|251782311|ref|YP_002996613.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390940|dbj|BAH81399.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323127208|gb|ADX24505.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 359

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + DSE+ ++A+ E+   +    + E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  ADAEEMIKDASGDSELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY+++A  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV ++PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+II+ L+   Q + + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQTQKLESLN 358


>gi|194468250|ref|ZP_03074236.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
 gi|194453103|gb|EDX42001.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
          Length = 362

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 236/353 (66%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++K ++E  ++   + K + Y +  Q   D  
Sbjct: 8   DKLQAVADRYDELNELISDPEVIADSQRFMKFSKEEGSLRETVEKYNQYKKVTQTISDDE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D ++  L + E+    +E  +LE E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 68  ELLRETNDD-DLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+ MY RYA  + WKVEV+  ++ + GG+KEI   I+G  V+S++KFE+G H
Sbjct: 127 EASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENGAH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PEA ++DVDI  +DIR+D  R+SG+GGQHVN T SA
Sbjct: 187 RVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 246

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L++R+YD  +++  +     RK  IG+GDR
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQQEQSAYDQKRKDAIGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+II  L+ A Q + +   
Sbjct: 307 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQTQKLEQL 359


>gi|239817175|ref|YP_002946085.1| peptide chain release factor 1 [Variovorax paradoxus S110]
 gi|259585259|sp|C5CXW3|RF1_VARPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239803752|gb|ACS20819.1| peptide chain release factor 1 [Variovorax paradoxus S110]
          Length = 362

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 168/361 (46%), Positives = 236/361 (65%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S    +     Y  ++ E+A I+ I  +   Y Q++ 
Sbjct: 1   MKTFLRHQLERYAQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYKQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ ++A+ E+ A + E+ +LE E+  LLLPKD DD ++  LEIR
Sbjct: 61  DIAGAAEMLE----DPDMAEMAREEIAAAQAELVQLEEELQRLLLPKDPDDARNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RY     W+ EV+S S+++ GGYKE+V  I+G  VF R++
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRIAGNDVFGRLR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAVL      + V I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTGI+     ++SQH+N+ +A++VL AR+ + +R   A + +A RK 
Sbjct: 237 INKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKDRSERAAKDAAMRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL+ +++G + D+++ L  A +A+ +   
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLQAIMEGDLGDVLDALRAAREAEQLAEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|260663282|ref|ZP_05864173.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
 gi|260552134|gb|EEX25186.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
          Length = 362

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 243/353 (68%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E  ++   + K + Y +  Q  +D  
Sbjct: 8   DKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKDDT 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD ++ ++ + E+   ++   +L++E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 68  EMLREE-SDPDLVEMTKEELNETKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGAAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+ MY RYA  + W VEV+  ++ + GG+KEI   I+G  V+S++KFE+G H
Sbjct: 127 EASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFENGAH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE++GRVHTS ATV V+PEA ++DVD+  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 187 RVQRIPATESAGRVHTSTATVGVMPEAEDVDVDLDPKDIRVDVYRSSGAGGQHINKTSSA 246

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L+AR+YD  +++  +E  A RK  IG+GDR
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQQEQSEYDAQRKNAIGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +++II  L+ A QA+ +   
Sbjct: 307 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQAQKLEQL 359


>gi|302380176|ref|ZP_07268648.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
 gi|302311959|gb|EFK93968.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
          Length = 355

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 248/354 (70%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  + ++F ++E+++++   +   + + KL +E+A + P+++K   Y    +  ++  
Sbjct: 3   ENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G    DSE+ +L + E+  +E++I + + E+  LLLPKD +D+K+  +EIRAG GG 
Sbjct: 63  ELLG-TTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF G+L RMY+ Y+  + W  E++       GG KE+V  + G+G +SR+K+ESGVH
Sbjct: 122 EAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPEA ++DV I  +D+RID  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPQTESSGRIHTSTATVAVLPEAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG++V    EKSQ +N+ +AMKVL++RL+D+  +    +R+  RK Q+G+GDR
Sbjct: 242 VRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLFDLMEEEKNKDRADARKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGRITDHRIN T+++L+  L G I+++I+ L +  QA+ +   +
Sbjct: 302 SERIRTYNFPQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQAEKLKMMN 355


>gi|238792551|ref|ZP_04636184.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
 gi|238728186|gb|EEQ19707.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
          Length = 360

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DLEAAEMMLE----DLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A +SG GVF ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTG++V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|297183691|gb|ADI19816.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_37G09]
          Length = 357

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 188/355 (52%), Positives = 251/355 (70%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
               + +  +  R  EIE ++S+S S+  D   KL+ E A + P+  ++ +     Q   
Sbjct: 1   MSLDQNMEKVLARREEIESQLSQSGSLSSDELTKLSRELAEVRPVAEQVFVVRHLAQALA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +I +  +D E+ ++A+ E+  +  ++ E E+++  LLLPKDTDD ++ ILE+RAGT
Sbjct: 61  DARQMIEEEGADPEMAEMAETEISELGPQLTEAEHDLKLLLLPKDTDDSRNAILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLF MY+R A+   WK EV+  S+   GGYKE  A ISG+ VF+R+KFES
Sbjct: 121 GGDEAALFAADLFGMYQRTASRYGWKFEVMEISETGIGGYKEATANISGQDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPEA ++D+++   D+R+D  RASG GGQ VNTT
Sbjct: 181 GVHRVQRVPETETGGRIHTSAATVAVLPEAQDVDIEVSESDLRVDVFRASGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V+  + KSQH+NR +AMK+LRAR+YD ER R   ER+A+RK Q+GS
Sbjct: 241 DSAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARQQAERAASRKGQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIG 353
           GDRSERIRTYNF QGR+TDHRIN TLYKL+ VL G  ID++I+ L +  QA  + 
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINFTLYKLDKVLAGEAIDEVIDALASEDQAARLA 355


>gi|288800098|ref|ZP_06405557.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333346|gb|EFC71825.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 369

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 139/361 (38%), Positives = 224/361 (62%), Gaps = 13/361 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L++RF E+   +++   +   + Y++LT+EY  +  I+     Y       ++   
Sbjct: 9   KLEGLESRFEEVSTLITDPAVIADQNRYVRLTKEYKDLGDIMEARKKYVTCLNVIKEAKD 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++  + +D ++R++A+ E+ A E  + +LE EI   L+PKD +D K+  +EIRAGTGG E
Sbjct: 69  ILA-NETDQDMREIAREELQANEPLLPKLEEEIKIALVPKDPEDAKNVEVEIRAGTGGDE 127

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLF+MY++Y     W + + + S+   GG+KEI  +++G  V+  +K+ESGVHR
Sbjct: 128 AALFAGDLFQMYKKYCDSMGWSISITNESEGTMGGFKEIAFSVTGTNVYGILKYESGVHR 187

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S V
Sbjct: 188 VQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 247

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK 
Sbjct: 248 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIASRRKS 307

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS +IRTYN+ QGR+TDHRI  T + L+  + G I  +I+ L+ A   + +  A
Sbjct: 308 LVSTGDRSAKIRTYNYPQGRVTDHRIGYTTHDLQGFVGGDIQAMIDALIVAENTEKLKEA 367

Query: 356 S 356
            
Sbjct: 368 E 368


>gi|238650227|ref|YP_002916078.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
 gi|259585243|sp|C4K0C9|RF1_RICPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238624325|gb|ACR47031.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
          Length = 355

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 176/354 (49%), Positives = 249/354 (70%), Gaps = 2/354 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  + +++  +   +S     D ++K ++EYA +  +++KI  Y++ K E ++ 
Sbjct: 1   MRFSDNLAKILDKYENLGNTLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           +    +   D+   ++ + E+  +E  + +LE  +   LLPKD  D KS I+E+RAG+GG
Sbjct: 61  NNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF   LF MY+RYA L+ W+ E+L+ SD   GGYKE  A+I G+ VFS++KFESGV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPEA E+D+ I  +D+RIDT RASG+GGQHVNTTDS
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDS 240

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI V    EKSQH+N+ +A+K+LRAR+Y+ ER++   ER+ +R+ Q+GSGD
Sbjct: 241 AVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF QGR++DHRINLTLYK++ V+  G +D+ +  L+   +AK +  
Sbjct: 301 RSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIADDEAKKLLE 354


>gi|227514467|ref|ZP_03944516.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
           14931]
 gi|227087153|gb|EEI22465.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
           14931]
 gi|299782948|gb|ADJ40946.1| Peptide chain release factor 1 (RF-1) [Lactobacillus fermentum CECT
           5716]
          Length = 362

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 243/353 (68%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++KL++E  ++   + K + Y +  Q  +D  
Sbjct: 8   DKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKDDT 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD ++ ++ + E+   ++   +L++E+  LL+PKD +DDK+ I+EIR   GG 
Sbjct: 68  EMLREE-SDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGAAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+ MY RYA  + W VEV+  ++ + GG+KEI   I+G  V+S++KFE+G H
Sbjct: 127 EASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFENGAH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE++GRVHTS ATV V+PEA ++DVD+  +DIR+D  R+SG+GGQH+N T SA
Sbjct: 187 RVQRIPATESAGRVHTSTATVGVMPEAEDVDVDLDPKDIRVDVYRSSGAGGQHINKTSSA 246

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++L+AR+YD  +++  +E  A RK  IG+GDR
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQQEQSEYDAQRKNAIGTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +++II  L+ A QA+ +   
Sbjct: 307 SERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQAQKLEQL 359


>gi|56416889|ref|YP_153963.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222475254|ref|YP_002563670.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
 gi|255003238|ref|ZP_05278202.1| peptide chain release factor 1 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004365|ref|ZP_05279166.1| peptide chain release factor 1 [Anaplasma marginale str. Virginia]
 gi|81599140|sp|Q5PAH2|RF1_ANAMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790858|sp|B9KIV2|RF1_ANAMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56388121|gb|AAV86708.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222419391|gb|ACM49414.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 187/358 (52%), Positives = 256/358 (71%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPS--VDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 +  L  +F  ++ ++S+  S  V A++  + EY+ + PI+S I  Y   ++E +
Sbjct: 1   MSFEDSLEGLCEKFRILKQQLSDPESLGVQAFVVASREYSDLLPIMSLIEEYQTAQKEIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +I   ++D+E+  LA+ E+   +K I +L++++   LLPKD DD +S ILEIRAGT
Sbjct: 61  ELEGLINSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFV DL+RMY +YA  + WKVE +  S    GGYKE    I G+ VF+R+KFES
Sbjct: 121 GGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTSAATVAVLPE  E+D+ I  +D+RID  R+SG GGQ VNTT
Sbjct: 181 GVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+V    EKSQH+N+ +A+KVLRARLY++E++++ +E S  RK QIGS
Sbjct: 241 DSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDEISKMRKSQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF Q RITDHRIN+TLY+LE+++ +G +D+ ++ L+   QA  +   S
Sbjct: 301 GDRSERIRTYNFLQSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQANKLQQIS 358


>gi|56808656|ref|ZP_00366381.1| COG0216: Protein chain release factor A [Streptococcus pyogenes M49
           591]
 gi|71903502|ref|YP_280305.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS6180]
 gi|71910676|ref|YP_282226.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS5005]
 gi|209559423|ref|YP_002285895.1| peptide chain release factor 1 [Streptococcus pyogenes NZ131]
 gi|119361623|sp|Q48TL0|RF1_STRPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238054473|sp|B5XLI8|RF1_STRPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71802597|gb|AAX71950.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
           MGAS6180]
 gi|71853458|gb|AAZ51481.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
           MGAS5005]
 gi|209540624|gb|ACI61200.1| Peptide chain release factor 1 [Streptococcus pyogenes NZ131]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 161/358 (44%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESLN 358


>gi|294673455|ref|YP_003574071.1| peptide chain release factor 1 [Prevotella ruminicola 23]
 gi|294472502|gb|ADE81891.1| peptide chain release factor 1 [Prevotella ruminicola 23]
          Length = 371

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 135/360 (37%), Positives = 217/360 (60%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+ RF E+   +++   +       KLT+EY  +  I+     Y       ++  
Sbjct: 10  QKLDGLEARFEEVSTLITDPAVIADQQRFVKLTKEYKDLGDIMDARKRYIACLNGIKEAK 69

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + +D E++++A+ E+   E+   +LE EI   L+PKD +D K+  +EIRAGTGG 
Sbjct: 70  DILA-NETDPEMKEMAREELAINEELQPQLEEEIKIALIPKDPEDAKNVEMEIRAGTGGD 128

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF+MY+ Y   + W+V +   S+   GG+KE+  +++G  V+  +K+ESGVH
Sbjct: 129 EAALFAGDLFKMYKNYCESKGWQVSITYVSEGAVGGFKEVDFSVTGADVYGTLKYESGVH 188

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GR+ TSAATVAVLPEA + +V +   +I+ DT R+SG+GGQ+VN  +S 
Sbjct: 189 RVQRVPVTESNGRMQTSAATVAVLPEADKFEVHVNEGEIKWDTFRSSGAGGQNVNKVESG 248

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ ++            ++  +  + Q +N+ RA+  L   +YD E ++  ++ +  RK
Sbjct: 249 VRLRYMWKNPNTGETEEILIECTETRDQPKNKERALSRLYTFIYDKEHQKYVDDIANRRK 308

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGR+TDHRI  T + L+  L G I  +I+ L  A  A+ +  
Sbjct: 309 SLVSTGDRSAKIRTYNFPQGRVTDHRIGYTTHDLQGFLGGDIQAMIDALTVAENAERMKE 368


>gi|300361412|ref|ZP_07057589.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
 gi|300354031|gb|EFJ69902.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
          Length = 362

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 241/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y    +E  D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I   + D ++ ++A+ E   +EKE+ ELE+EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IISSESDD-DLVEMAKEENFELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRVPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +  ++  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDKYDAKRKDAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ V+ G +D+IIN L+  +Q + +   +E
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELDEIINALVLYYQTQQLEKMAE 359


>gi|256419486|ref|YP_003120139.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
 gi|256034394|gb|ACU57938.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
          Length = 354

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 157/356 (44%), Positives = 228/356 (64%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF ++ L ++    V     + KL++EY  +  I+     Y +       
Sbjct: 1   MIDKLYAIKGRFEQVSLALTNPEIVSDNKQFSKLSKEYRQLEKIVKVYDAYMKTLDNIAF 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              V+   + D E+R+LA+ E  A++    E E +I  LL+PKD  D+K+ +LEIR GTG
Sbjct: 61  NKEVL--ESGDEEMRELAKEETEALQLLKDEQEADIRNLLIPKDPQDEKNAMLEIRGGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF GDL RMY RY   + W   +++ +    GGYKE+V  ++G  V+  +KFESG
Sbjct: 119 GDEASLFAGDLLRMYLRYCETKGWSTSIMNETPGAAGGYKEVVVEVTGDDVYGTLKFESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GRVHTSAATVA+LPEA E+DV+I   DI++DT R+SG+GGQHVN T+
Sbjct: 179 VHRVQRVPATETQGRVHTSAATVAILPEAEEVDVEIRDADIKMDTFRSSGAGGQHVNKTE 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIP+G++V     +SQH NR  AMK+LR+R+Y+   ++     ++ RK  + +G
Sbjct: 239 SAVRLTHIPSGVVVECQEGRSQHSNRDIAMKMLRSRIYEAAVRKHEEAIASQRKSLVSTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS +IRTYN+ QGR+TDHRI +T+Y L+  + G I +++  L  A  A+ +   S
Sbjct: 299 DRSAKIRTYNYPQGRVTDHRIGMTMYNLDAFMNGDIQEMVQALQFAENAEKMKMGS 354


>gi|154490829|ref|ZP_02030770.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC
           43184]
 gi|154088577|gb|EDN87621.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC
           43184]
          Length = 369

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 154/362 (42%), Positives = 228/362 (62%), Gaps = 14/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L +RF E+   +++   +     Y+KLT+EY  ++ II     Y Q     ++  
Sbjct: 9   EKLDGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELNEIIKARKEYMQCLNGLEEAR 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D E+R++A+ E  A E  I ELE EI  LL+P D  DDK+ I+EIR GTGG 
Sbjct: 69  LMMAE--TDPEMREIAREEAAACEARIPELEEEIKLLLVPADPQDDKNAIVEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY +Y  ++ WKV + S S+   GG+KEI+ T+SG  V+  +K+ESGVH
Sbjct: 127 EAALFAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTVSGEKVYGTLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAATVAVLPEA E DV+I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 187 RVQRVPATETQGRVHTSAATVAVLPEADEFDVEINEGEIKWDTFRSGGAGGQNVNKVESG 246

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ ++            ++  +  + Q +N+ RA+  LR+ +YD E ++  ++ +  RK
Sbjct: 247 VRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLDDIANKRK 306

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I   ++ L+ A  A+ +  
Sbjct: 307 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLSAFMDGDIQGCLDQLIVAENAERLKE 366

Query: 355 AS 356
           + 
Sbjct: 367 SE 368


>gi|228477589|ref|ZP_04062222.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
 gi|228250733|gb|EEK09931.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 154/358 (43%), Positives = 231/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTAYREYKQVIQSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I + + D ++ ++A+ E+   +    E E  +  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEELN 358


>gi|88606704|ref|YP_505023.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
 gi|119361507|sp|Q2GKS8|RF1_ANAPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88597767|gb|ABD43237.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 185/356 (51%), Positives = 250/356 (70%), Gaps = 4/356 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                    L  +F  ++ ++S   ++   A++  + EY+ + PI+S I  Y   ++E  
Sbjct: 1   MSFESTFEGLCEKFRILKQQLSAPETLGTQAFVVASREYSDLLPIMSLIEKYKSTQKEIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  ++   ++D E+R LA+ E    +K + +L +E+   LLPKD DD ++ ILEIRAGT
Sbjct: 61  ELEELVNSASTDPELRSLAKDESHIKQKLLPKLRHELQLSLLPKDRDDSRNAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFVG+L+RMY +YA  + WKVE ++ S    GGYKE   +I G+ VF+R+KFES
Sbjct: 121 GGEEAALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASFSIGGKDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTSAATVAVLPE  E+D+ I  +D+RID  R+SG GGQ VNTT
Sbjct: 181 GVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+V    EKSQH+N+ +A+KVLRARLY++E+++   E S  RK QIGS
Sbjct: 241 DSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKREEEISKMRKSQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHRINLT Y+L+YV+ +G +D+ I+ L+   QA  +  
Sbjct: 301 GDRSERIRTYNFLQSRITDHRINLTSYRLDYVMKEGDLDEFIDALVADDQANKLKQ 356


>gi|190570518|ref|YP_001974876.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019274|ref|ZP_03335081.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238054477|sp|B3CL87|RF1_WOLPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190356790|emb|CAQ54152.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995383|gb|EEB56024.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 363

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 186/355 (52%), Positives = 252/355 (70%), Gaps = 5/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 + DLK +F+++E  +    ++    ++  ++EY+ + PII  I  Y+  K+E  
Sbjct: 1   MDIENNLQDLKKKFSDVERNLENPTNLSQKEFVSFSKEYSELRPIIEIIDEYNILKEEIS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL-PKDTDDDKSCILEIRAG 119
           DL  ++ D NSD +I++LA+ E+L  +K +         L L PKD DD ++ ILEIRAG
Sbjct: 61  DLEEIMKDENSDGDIKELAKEELLEKQKIVLPKVKAKLKLALLPKDEDDSRNAILEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF   LFRMY++YA  R WK E +S S+   GGYKE  A I+G  VF+R+KFE
Sbjct: 121 TGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+SGR+HTSAATVA+LPE  E+D +I  +D+RID  R+SG GGQ VNT
Sbjct: 181 SGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFEIEEKDLRIDVYRSSGPGGQSVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH+PTGI+V    EKSQH+N+ +A+KVLRARLY++ER++   ERS  RK QIG
Sbjct: 241 TDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTMRKSQIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMI 352
           SGDRSERIRTYNF Q RITDHRINLT ++LE ++ +G +D+ I  L++ ++A+ +
Sbjct: 301 SGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELDEFIEALISRNEAERL 355


>gi|110598269|ref|ZP_01386544.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110340077|gb|EAT58577.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 357

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 161/355 (45%), Positives = 229/355 (64%), Gaps = 6/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K +  ++E  +++         + KL +EY+ +  I+     Y Q K E   
Sbjct: 1   MLDKLQSIKEKHLDLEQLLADPNAATDQARFRKLNKEYSDLREIVQAYDAYGQAKTELDQ 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D  SD E+R+L Q E+  ++K++ ELE  +  LLLPKD  D ++ I+EIRAGTG
Sbjct: 61  SKKLL-DSESDPEMRELVQAEISELQKKLPELEQHLKVLLLPKDEADSRNVIVEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGRGVFSRMKFES 180
           G EAALF  D+ RMY+RYA  + WK EVL  +++   GG++EI   +SG  V+  MK+ES
Sbjct: 120 GEEAALFAADILRMYQRYAEKQGWKCEVLHYNESSMPGGFREITLEVSGHDVYGTMKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSA +VAVLPEA E+DV+I  ED+R DT R+ G GGQ+VN  
Sbjct: 180 GVHRVQRVPDTETQGRIHTSAVSVAVLPEAEEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239

Query: 241 DSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AVRITH+PTGI+     E+SQ QN+ RAMK+LR +LYD+       +R+  R+  + +
Sbjct: 240 ETAVRITHMPTGIVSACQEERSQLQNKERAMKMLRTKLYDILLAEQVQQRADLRRSMVTT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRS +IRTYN+ Q R+TDHRI  T + L  +LQG I DII+ L    QA+ + +
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTSHALPQILQGEIQDIIDALKMHDQAERLKA 354


>gi|238783270|ref|ZP_04627295.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
 gi|238715863|gb|EEQ07850.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
          Length = 360

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 168/362 (46%), Positives = 247/362 (68%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   ++
Sbjct: 1   MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIEAAEMML----DDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A +SG G F ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTG++V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + 
Sbjct: 297 LLGTGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIVQEYQADQLSAL 356

Query: 356 SE 357
           SE
Sbjct: 357 SE 358


>gi|269926759|ref|YP_003323382.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790419|gb|ACZ42560.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 355

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 239/356 (67%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQD 61
             +++ +++ RF E++  MS+        +L     E + +  I+S    Y + K   ++
Sbjct: 1   MLERLDNIEKRFDELDRMMSDPEIFSDPSRLMEVARERSELEDIVSLYREYKKVKLTREE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D +IR +A+ E   +    ++LE  +   LLPKD +D+K  I+EIRAGTG
Sbjct: 61  DRRLMEDP--DPDIRQMAEEEYEQLADREKDLEERLKIALLPKDPNDEKDVIVEIRAGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA  + WK EVLS+S++D GG+KEI+  + GRG +SR+K+ESG
Sbjct: 119 GEEAALFAADLYRMYTRYAERQGWKTEVLSTSESDAGGFKEIIFEVKGRGAYSRLKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPEA E++V+I  ED+RID  R++G GGQ VNTTD
Sbjct: 179 VHRVQRVPVTESQGRIHTSTATVAVLPEAEEVEVEIDPEDLRIDVFRSTGHGGQSVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    EKSQ +NR +AM VLRARLY++ER++   E    R+  +G+G
Sbjct: 239 SAVRITHLPTGLVVTCQDEKSQLKNRAKAMAVLRARLYEMERRKREEELGQVRRSMVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSE+IRTYNF Q R+TDHRI  +   L  +L G ID II  L  A +A+ + SA 
Sbjct: 299 ERSEKIRTYNFPQDRVTDHRIKESFSNLPAILDGEIDRIIESLQVADRAEQLQSAG 354


>gi|218263804|ref|ZP_03477780.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222477|gb|EEC95127.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii
           DSM 18315]
          Length = 369

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 153/362 (42%), Positives = 228/362 (62%), Gaps = 14/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L +RF E+   +++   +     Y+KLT+EY  ++ II     Y Q     ++  
Sbjct: 9   EKLEGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELNEIIKARKEYMQCLNGLEEAR 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D E++++A+ E  A E  I ELE EI  LL+P D  DDK+ I+EIR GTGG 
Sbjct: 69  LMMAE--TDPEMKEIAREEAAACEARIPELEEEIKLLLVPADPQDDKNAIVEIRGGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY +Y  ++ WKV + S S+   GG+KEI+ T+SG  V+  +K+ESGVH
Sbjct: 127 EAALFAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTVSGEKVYGTLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAATVAVLPEA E DV+I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 187 RVQRVPATETQGRVHTSAATVAVLPEADEFDVEINEGEIKWDTFRSGGAGGQNVNKVESG 246

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ ++            ++  +  + Q +N+ RA+  LR+ +YD E ++  ++ +  RK
Sbjct: 247 VRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLDDIANKRK 306

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I   ++ L+ A  A+ +  
Sbjct: 307 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLSAFMDGDIQGCLDQLIVAENAERLKE 366

Query: 355 AS 356
           + 
Sbjct: 367 SE 368


>gi|169833220|ref|YP_001694464.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|238688292|sp|B1IBH9|RF1_STRPI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168995722|gb|ACA36334.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    +     Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTRRFMELSKEEASNRDTVIAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVMDALVLYDQTQKLEELN 358


>gi|237721316|ref|ZP_04551797.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4]
 gi|229449112|gb|EEO54903.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4]
          Length = 370

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 145/362 (40%), Positives = 225/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF E    +++   +     Y+KLT+EY  +  ++     Y Q     ++  
Sbjct: 9   EKLDGLVARFEETSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD+E+R++A+ E+   ++ +  LE EI  +L+P D  D K+ ILEIR G GG 
Sbjct: 69  NILA-NESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++   + WK+EV ++++   GG+KE+V +++G  V+  +K+ESGVH
Sbjct: 128 EAAIFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAA+VAVLPEA E DV I   +I+ DT R+ G+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAASVAVLPEAEEFDVVINEGEIKWDTFRSGGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +I            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAERLKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|116629883|ref|YP_815055.1| peptide chain release factor 1 [Lactobacillus gasseri ATCC 33323]
 gi|238853674|ref|ZP_04644042.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
 gi|282851601|ref|ZP_06260966.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
 gi|311110481|ref|ZP_07711878.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
 gi|122273179|sp|Q042K5|RF1_LACGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116095465|gb|ABJ60617.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           gasseri ATCC 33323]
 gi|238833712|gb|EEQ25981.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
 gi|282557569|gb|EFB63166.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
 gi|311065635|gb|EFQ45975.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
          Length = 362

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 241/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y    +E  D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I   + D ++ ++A+ E   +EKE+ +LE+EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IISSESDD-DLVEMAKEENSELEKEVAKLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRVPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +  ++  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDKYDAKRKDAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ V+ G +D+IIN L+  +Q + +   +E
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELDEIINALVLYYQTQQLEKMAE 359


>gi|332523754|ref|ZP_08400006.1| peptide chain release factor 1 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315018|gb|EGJ28003.1| peptide chain release factor 1 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 232/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  L++R+ E+   +S+   V     +++L++E A     ++    Y +  Q  
Sbjct: 1   MNIYDQLQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEANTRDTVTTYRQYKEIIQSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+EI ++A+ E+   +      E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  ADAEEMIKESGGDAEIEEMAKEELKESKAAKENYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY+++A  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  +++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEDVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI HIPT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALIMYDQTQKLESLN 358


>gi|290475215|ref|YP_003468101.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
 gi|289174534|emb|CBJ81328.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
          Length = 360

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 247/355 (69%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R  EI + + ++  +   D +  L++EYA ++ +      +   +++ Q    
Sbjct: 8   KLEALQERHEEILVHLGDASVIADQDRFRALSKEYAQLTDVTHCFKSWKTVQEDLQTAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD+++C LE+RAGTGG E
Sbjct: 68  ML----DDLEMREMAQEELKDAKIRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY RYA  R+W+VE++S+++ + GGYKE++A +SG  V+  +KFESG HR
Sbjct: 124 AAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIAKVSGDQVYGHLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAV+PE  E +  DI   D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVMPEIPEAELPDISPGDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  +     ++ R+  +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEMHKRQEAEASERRNLLGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVIEGKLDMLIQPIIIEYQADQLSALSE 358


>gi|326386588|ref|ZP_08208210.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208903|gb|EGD59698.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 356

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 176/355 (49%), Positives = 250/355 (70%), Gaps = 6/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           ++  ++  +  RFAE+E R++      +A+I  + +YA + P+          +    +L
Sbjct: 3   IADSRLDQIAARFAELEARLASGTLDAEAFIAASRDYAELEPVAHTARDVRLLR---DEL 59

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++      D+++R LA+ E+  I  E+ E E  +   +LP+D  D    +LEIRAGTGG
Sbjct: 60  ASLAALDEPDADMRALAEEEMARIRAELPEAERRLALAMLPRDNADSHPAMLEIRAGTGG 119

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DLFRMYERYAA + WKVEV+S++ +D GG+KE++A ++G+GVF+++K+ESGV
Sbjct: 120 DEAALFAADLFRMYERYAAEQGWKVEVISANASDIGGFKEVIAHVAGQGVFAKLKYESGV 179

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPE  E+DV I  +D++ID  RASG+GGQHVNTTDS
Sbjct: 180 HRVQRVPVTESGGRIHTSAATVAVLPEPDEVDVSIDDKDLKIDIYRASGAGGQHVNTTDS 239

Query: 243 AVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+VT  + +SQH+N+ +AM+VLR RLYD+ R++     +  R+  +GSGD
Sbjct: 240 AVRITHLPTGIVVTQQDERSQHKNKAKAMQVLRTRLYDLRREQAQGAEAEARRAMVGSGD 299

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           RSERIRTYNF QGR+TDHRINLTL++L  +L G  + ++I+ L    QAK + + 
Sbjct: 300 RSERIRTYNFPQGRVTDHRINLTLHRLPEILAGTGLGELIDALTAEDQAKRLAAM 354


>gi|269958696|ref|YP_003328483.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
 gi|269848525|gb|ACZ49169.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 186/358 (51%), Positives = 256/358 (71%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPS--VDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 +  L  +F  ++ ++S+  S  V A++  + EY+ + PI+S +  Y   ++E +
Sbjct: 1   MSFEDSLEGLCEKFRILKQQLSDPESLGVQAFVVASREYSDLLPIMSLVEEYQTAQKEIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +I   ++D+E+  LA+ E+   +K I +L++++   LLPKD DD +S ILEIRAGT
Sbjct: 61  ELEGLINSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFV DL+RMY +YA  + WKVE +  S    GGYKE    I G+ VF+R+KFES
Sbjct: 121 GGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTSAATVAVLPE  E+D+ I  +D+RID  R+SG GGQ VNTT
Sbjct: 181 GVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+V    EKSQH+N+ +A+KVLRARLY++E++++ +E S  RK QIGS
Sbjct: 241 DSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDEISKMRKSQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF Q RITDHRIN+TLY+LE+++ +G +D+ ++ L+   QA  +   S
Sbjct: 301 GDRSERIRTYNFLQSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQANKLQQIS 358


>gi|257066246|ref|YP_003152502.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
 gi|256798126|gb|ACV28781.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
          Length = 358

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 229/355 (64%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + I  +K  + ++E +M +      +    K+T EY ++ PI+ K       +    +  
Sbjct: 3   ENIEHIKENYLDLEKKMIDPDVLADISKLTKITREYNSLKPIVEKYDEIKDSESTIAENK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +IG+   D ++ ++ + E+   EK + + + E+  LL+PKD +D +  I+EIR G GG 
Sbjct: 63  ELIGEA-DDQDMVEMLKDEIKENEKLLEKYKEEMKILLIPKDPNDSRDVIVEIRPGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF GDL+RMY  YA    +K E +  S    GG KE    I G G +SR K+ESGVH
Sbjct: 122 EAGLFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKEATFMIRGEGAYSRFKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  E+DV++   DIR D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVDEVDVELDPNDIRTDVFRSSGNGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   EKSQ +N+ +AMK+L AR+Y++E ++   E + NRK Q+G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKEIADNRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGRITDHRIN T+Y+L+  L G I ++I+ L+   Q + +    E
Sbjct: 302 SERIRTYNFPQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIAEDQTRKLEKIGE 356


>gi|114330834|ref|YP_747056.1| peptide chain release factor 1 [Nitrosomonas eutropha C91]
 gi|122314234|sp|Q0AHU1|RF1_NITEC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114307848|gb|ABI59091.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosomonas
           eutropha C91]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 177/356 (49%), Positives = 240/356 (67%), Gaps = 9/356 (2%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  L  R  E++  +S       +D Y KL+ E + I P+      Y Q +Q+     
Sbjct: 7   DQLTRLSIRLEELDKLLSNEKITADLDNYRKLSRERSEIEPVTRFYHTYQQVEQDLATAM 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +    + D + RD A+ E+ A ++++ ++E EI   LLP+D +D+++  LEIRAGTGG 
Sbjct: 67  EM----SVDPQFRDFAEAEIDADKQKLADIETEILKQLLPRDPNDERNIFLEIRAGTGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ALF GDLFRMY RYA    W+VE++S + ++ GGYKEI+A I G G +SR+KFESG H
Sbjct: 123 ESALFAGDLFRMYSRYAEREGWQVEIVSQNPSEVGGYKEIIARIIGHGAYSRLKFESGAH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVPATE  GRVHTS  TVAVLPEA EI  V +   D+RIDT RASG+GGQH+N TDS
Sbjct: 183 RVQRVPATETQGRVHTSTCTVAVLPEADEISGVTLNPADLRIDTFRASGAGGQHINKTDS 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+      +SQH+N+ +AM VL +R+ D + +    E++A RK  +GSG+
Sbjct: 243 AVRITHLPTGIVAECQEGRSQHKNKAQAMSVLISRILDKQVRAQQAEQAAARKSLVGSGE 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYNF QGRITDHRINLTLYK+E ++ G +D++ + L   HQA  + +  E
Sbjct: 303 RSERIRTYNFPQGRITDHRINLTLYKIEQIMDGELDELCSTLAAEHQAAQLAAMIE 358


>gi|328950071|ref|YP_004367406.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM
           14884]
 gi|328450395|gb|AEB11296.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM
           14884]
          Length = 369

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 224/357 (62%), Gaps = 8/357 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L+  +  +E ++ +         Y +L+  YA +  I+     Y +   + + 
Sbjct: 11  MLEKLKQLETEYQALEAQLGDPGVLADPKRYRELSRRYAELGEIVRVYREYTKTLDDLEQ 70

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E+ ++A+ E   +E    ELE E+  LLLPKD  D K+ I+EIRAGTG
Sbjct: 71  AQALL----DDPELGEMARAEKETLEARRDELERELELLLLPKDPVDAKNAIVEIRAGTG 126

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+ MY RYA    + VEVL S   D GG+ ++V  ++G G +   K+ESG
Sbjct: 127 GEEAALFAGDLYNMYVRYAERLGYTVEVLDSHPTDLGGFSKVVFQVNGSGAYGVFKYESG 186

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTS ATVAVLPEA E D ++ + +IRID  RASG GGQ VNTTD
Sbjct: 187 VHRVQRVPATETQGRIHTSTATVAVLPEAEEADFELDMSEIRIDVQRASGPGGQGVNTTD 246

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H+PTGI+V     +SQ +NR +A+ +LR+RL +++R     +    R  QIG+G
Sbjct: 247 SAVRVVHLPTGIIVTCQDSRSQIKNREKALTILRSRLLEMKRAEEEAKLRRTRLAQIGTG 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +RSE+IRTYNF Q R+TDHRI+ T + LE VL G ++++ N L  A Q +M+   ++
Sbjct: 307 ERSEKIRTYNFPQSRVTDHRIHYTTHNLEGVLAGELEELTNALKKADQERMLEELNQ 363


>gi|227486771|ref|ZP_03917087.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235241|gb|EEI85256.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
           51172]
          Length = 358

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  ++  + ++E ++++      +D + K+++EY ++ P++ K       +    +  
Sbjct: 3   ENLEHVRENYKQLEAKLADPAVLADMDQFRKVSKEYNSLKPVVEKYEEIKNAEDTIAENQ 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I +   D ++  + + E+   + ++  L++E+  LL+PKD +D+K  I+EIR G GG 
Sbjct: 63  ELINEA-DDQDMIQMLKDEIEENKDKLEVLKDEMQILLIPKDPNDEKDVIVEIRPGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF GDL+RMY  YA    +K E +  +    GG K+    + G G +S++K+ESGVH
Sbjct: 122 EAGLFAGDLYRMYNMYADKAGFKTEEIEVNTQGVGGIKDATFVVRGEGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  E+++ I   DIR D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVDEVELHIDPNDIRTDVYRSSGNGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTG++V    EKSQ +N+ +AM+VLRARLY++E ++   E + NRK Q+G+GDR
Sbjct: 242 VRLTHIPTGLVVAIQDEKSQIKNKEKAMRVLRARLYELEEQKRNKEIADNRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGRITDHRIN T+Y+L+  L G I+D+IN L+   Q + +    
Sbjct: 302 SERIRTYNFPQGRITDHRINKTIYQLDDFLNGDIEDMINSLIAEDQTRKLEKVG 355


>gi|326318376|ref|YP_004236048.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375212|gb|ADX47481.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 360

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 167/361 (46%), Positives = 239/361 (66%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S    +     Y  ++ E+A ++ I  + + Y Q++ 
Sbjct: 1   MKPFLRSQLERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQIAGRYARYRQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ D+A+ E+ A E E+ +LE+E+  LLLP+D D+ ++  LEIR
Sbjct: 61  DLAGAREML----DDPDMADMAREEISAAEAELVQLEDELQRLLLPRDPDEARNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYAA   WKVE+LS+SDN+ GGYKE+V  + G GV+  ++
Sbjct: 117 AGTGGDESALFAGDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PE  E         D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A + +A RK 
Sbjct: 237 INKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYNF QGR+TDHRINLTLYKL  +++G + ++++ L  A +A+++   
Sbjct: 297 LVGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAIMEGDLGEVLDALRHAREAELLAEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|71892127|ref|YP_277859.1| peptide chain release factor 1 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|119361510|sp|Q492V8|RF1_BLOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71796233|gb|AAZ40984.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 360

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 161/362 (44%), Positives = 239/362 (66%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M  +   ++  L+ RF  +E  +S+  ++D       L +E+A +S I+     +   KQ
Sbjct: 1   MNSIIVNKLIALQERFNVLEKLLSKPNAIDDKKHFCTLAKEHARLSEIVVCFERWLDIKQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           E  +   ++     D ++ D+AQ E+         +E  +  LLLP D++D   C +E+R
Sbjct: 61  EIINTKKLLE----DVDMHDIAQDELKTFYLNRNNIEKNLKILLLPTDSNDKLGCFIELR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F G+LFRMY RY+ +R+WK+E+++++  + GGYKEI+A I  RG +S +K
Sbjct: 117 AGTGGKEAAIFTGELFRMYVRYSEVRRWKMEIINATYGECGGYKEIIAKIPYRGAYSLLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQR+P TE+ GR+HTS  T+AV+PE  +I+   I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRIPHTESQGRIHTSTCTIAVIPEIPDIELPSIDPHDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+P+G++V    E+SQH+N+ +A+ VL +RL+ +E KR   E S  R+ 
Sbjct: 237 VNTTDSAIRITHVPSGLVVECQDERSQHKNKAKALSVLGSRLHAIEMKRRQQEVSCTRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRS+RIRTYNF QGRITDHRI+ T YKL  ++ G +D +I P++  HQ+  +   
Sbjct: 297 LLGTGDRSDRIRTYNFQQGRITDHRISFTSYKLNEIMNGELDLLIQPIIHQHQSDQLNKL 356

Query: 356 SE 357
            E
Sbjct: 357 LE 358


>gi|323463876|gb|ADX76029.1| peptide chain release factor 1 [Staphylococcus pseudintermedius
           ED99]
          Length = 358

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 249/353 (70%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  ++ R+ ++   +S+   V       K ++E + +   +     Y Q K++ +++ 
Sbjct: 3   DQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEEIE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   +++  ++ + E  A++ E+ ELE ++  LL+PKD +D+K  I+EIR   GG 
Sbjct: 63  LMLAET-DEADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F GDLFRMY ++A   ++K+E++ ++++D GGYKEI  ++SG G +S++K+E+G H
Sbjct: 122 EAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  +++++I  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITHIPTG++ TSSEKSQ QNR +AMKVL+ARLYD++ +    + +A RK  +G+GDRS
Sbjct: 242 VRITHIPTGVIATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAAQRKSAVGTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHRI LTL KL+ +++G +D+I++ L    Q + +   +
Sbjct: 302 ERIRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIVDALTMHEQTEKLKELN 354


>gi|163784022|ref|ZP_02178981.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880707|gb|EDP74252.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 247/350 (70%), Gaps = 6/350 (1%)

Query: 11  DLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +L+ +  E+E +++     +      +L +E+  ++ ++   + Y+  ++  ++   ++ 
Sbjct: 11  ELEAKLKEVEEKLASPEVANNPKQLQELAKEHKHLAYVVELFNRYENIEKSIKETKELL- 69

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            H+ D E+R LA+ E+  ++ +  +LE+EI   L+PKD +DDK+ ILEIR G GG EAAL
Sbjct: 70  -HSQDEEMRLLAEEELENLKSQKEKLESEIQIALIPKDPNDDKNVILEIRQGAGGDEAAL 128

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F  +LFRMY+RYA    WKVE+LS  +N+ GG KE++A I G G +S++K+ESGVHRVQR
Sbjct: 129 FAAELFRMYQRYAEKNGWKVEILSLHENERGGIKEVIALIKGEGAYSKLKYESGVHRVQR 188

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           VP TE+SGR+HTS ATVAVLPEA E+DV+I  +D++I+TMRASG+GGQHVNTTDSAVRIT
Sbjct: 189 VPETESSGRIHTSTATVAVLPEAEEVDVEINPDDLKIETMRASGAGGQHVNTTDSAVRIT 248

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTGI+V    E+SQ QNR +AM++LRARL D   +    +  + RK Q+G+GDRSE+I
Sbjct: 249 HIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRIQQEKIKSERKSQVGTGDRSEKI 308

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RTYNF Q R+TDHRI  T +++  +L G +D+II+ L+   Q + + S S
Sbjct: 309 RTYNFPQNRVTDHRIGYTSHRINEILDGELDEIIDQLILKDQEEKLSSLS 358


>gi|254995073|ref|ZP_05277263.1| peptide chain release factor 1 [Anaplasma marginale str.
           Mississippi]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 186/358 (51%), Positives = 256/358 (71%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPS--VDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 +  L  +F  ++ ++S+  S  V A++  + EY+ + PI+S +  Y   ++E +
Sbjct: 1   MSFEDSLEGLCEKFRILKQQLSDPESLGVQAFVVASREYSDLLPIMSLVEEYQTAQKEIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +I   ++D+E+  LA+ E+   +K I +L++++   LLPKD DD +S ILEIRAGT
Sbjct: 61  ELEGLINSTDTDAELVHLAKEELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFV DL+RMY +YA  + WKVE +  S    GGYKE    I G+ VF+R+KFES
Sbjct: 121 GGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+SGR+HTSAATVAVLPE  E+D+ I  +D+RID  R+SG GGQ VNTT
Sbjct: 181 GVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+V    EKSQH+N+ +A+KVLRARLY++E++++ +E S  RK QIGS
Sbjct: 241 DSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDEISKMRKSQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF Q RITDHRIN+TLY+LE+++ +G +D+ ++ L+   QA  +   S
Sbjct: 301 GDRSERIRTYNFLQSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQANKLQQIS 358


>gi|320354565|ref|YP_004195904.1| peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123067|gb|ADW18613.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfobulbus
           propionicus DSM 2032]
          Length = 356

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 241/352 (68%), Gaps = 4/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             + D+  +   +E ++++   V     Y ++  E+A ++ I    + Y   + +     
Sbjct: 3   DNLRDIDEKLGVLERQLADPQLVSDQQRYREIVREHANVAKIAELYAAYTNVRAQIAGNQ 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I     D ++ +LA+ E+  +  +  ELE  I   LLPKD +DDK+  LEIRAGTGG 
Sbjct: 63  ELIRTEQDDPDLVELAKAEIEELVVKQTELEQAIRIRLLPKDPNDDKNIFLEIRAGTGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFV DLFRMY RYA ++ WKVEV+SS+    GG+KE++A +SG  V+SR+K+ESGVH
Sbjct: 123 EAALFVADLFRMYSRYAEMQGWKVEVMSSNPIGIGGFKELIALVSGTQVYSRLKYESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTSA TVA++PEA E+D+ I   +++ D  R+SG GGQ VNTTDSA
Sbjct: 183 RVQRVPDTETQGRIHTSAVTVAIIPEAEEVDLHIEPNELKFDVYRSSGPGGQSVNTTDSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQH+N+ +A++VLRARL D   +   +  S  RK Q+GSGDR
Sbjct: 243 VRVTHLPTGLVVTCQDEKSQHKNKAKALQVLRARLLDKMEQERHDRISEERKSQVGSGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYNF QGR+TDHRINLTLY+L+ V+ G +DDII P++T +Q + + S
Sbjct: 303 SERIRTYNFPQGRVTDHRINLTLYRLDQVMAGMLDDIILPIITHYQTEALKS 354


>gi|223983553|ref|ZP_03633736.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
           12042]
 gi|223964481|gb|EEF68810.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
           12042]
          Length = 359

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 147/356 (41%), Positives = 220/356 (61%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQD 61
             K++  ++ R+ EI   M     V       KL +E A++   +             + 
Sbjct: 4   MMKRLQSIEERYNEINEEMMSPEIVSDPKRLAKLGKEQASLKQSVEAYEELKSLNSHIEQ 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  +H  D E++++AQ+E+  +  +   L  +I  LL+PKD +DD  CI+EIR   G
Sbjct: 64  AEEMAKEH--DPELKEMAQMELEELLPKKEALIAKIEVLLIPKDPNDDHDCIVEIRGAAG 121

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E  +F GDL+RMY RYA  + WK++VL  S+++ GG+  I   + G  V+ ++KFESG
Sbjct: 122 GDEGNIFAGDLYRMYVRYAETQGWKIQVLEMSESEAGGFSMISFLVKGGEVYRQLKFESG 181

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE  GR+HTS ATV VLP+A E D++I   D+  +T RASG+GGQH+N TD
Sbjct: 182 AHRVQRVPKTETQGRIHTSTATVLVLPDAEEADIEIDPADLTFETHRASGAGGQHINKTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H+PTGI V     +SQH+NR  A++++RAR+Y+   ++   E  A R+ +IG+G
Sbjct: 242 SAVRIVHVPTGITVNCQEGRSQHENRETALRLIRARVYEELTRQKEEEEGAVRRAKIGTG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSE+IRTYN+ Q R+TDHRI  T+ +L+ +++G +DD+I  LL   Q + +   +
Sbjct: 302 DRSEKIRTYNYPQNRVTDHRIGFTINQLDRIMEGKLDDVIAALLAEEQRQKLAGEN 357


>gi|262279542|ref|ZP_06057327.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259893|gb|EEY78626.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 362

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 244/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   +++   +     + KL+ E++ +S I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+ A +  + ELE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAELM----KSDPDFKDMAEEEIQANKALLGELESQLNILMIPKDPNDSNAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GG+KE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   + +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|319947033|ref|ZP_08021267.1| peptide chain release factor RF1 [Streptococcus australis ATCC
           700641]
 gi|319747081|gb|EFV99340.1| peptide chain release factor RF1 [Streptococcus australis ATCC
           700641]
          Length = 359

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 157/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDMVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   DS++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKEAGGDSDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL +MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|163787722|ref|ZP_02182169.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1]
 gi|159877610|gb|EDP71667.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1]
          Length = 358

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 232/354 (65%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             ++I  +K RF E+   + +   +     Y KL +EY     I+ K ++Y +      +
Sbjct: 1   MLEKIQIIKQRFDEVNDLIIQPDIISDQKRYAKLMKEYKDFKLIVDKGAVYKEALDNVAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D + D E+ ++A++++   +  I +LE EI ++L+PKD DD K+ ++E+RAGTG
Sbjct: 61  AEEIITDGSDD-EMVEMAKMQLDEAKDTIEKLEEEIRFMLIPKDPDDAKNVVVEVRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y + + W+V+V+S SD   GG+KE++  +SG  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYSKYCSDKGWRVDVVSQSDGTSGGFKEVIFEVSGEDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E D ++ + ++RI+   ++G GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDYELDMTEVRIERTTSTGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+++ H PTG++V    +KS H+N  +A+KVLR+RLY+ E  +     S  RK  + SG
Sbjct: 240 SAIKLHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYERELAKRQAADSEKRKSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRS +IRTYN+ QGR+TDHRI LTLY L  ++ G I  II+ L+ A   +++ +
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLTNIINGDIQKIIDELMLAENTELLKA 353


>gi|260438934|ref|ZP_05792750.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
 gi|292808585|gb|EFF67790.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
          Length = 358

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 165/355 (46%), Positives = 241/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + ++  ++ +I + ++          +  L +E + ++P++   + Y +  Q+ +D  
Sbjct: 3   ENLEEILIKYEDINMELASPDVTSDQRRFRNLMKEQSDLTPLVEAYTAYKKANQDIKDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N +     L +    A +K    LE +I  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  EMLEEENDEEMREMLKEELSSAKDKVAE-LEEKIKILLLPKDPNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +LFRMY  YA  R+WKVEV++S +   GG KE+   ++G+G +S +K+ESGVH
Sbjct: 122 EAALFAAELFRMYTHYAEARRWKVEVVNSDETGIGGMKEVEFMVTGQGAYSVLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS A+VAV+PEA E++V I  +DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTASVAVMPEAEEVEVQIDEKDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI++ + +EKSQ QN+ +A  +LRA+LYD+E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKAHDAEADARRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYKL+ +L G I +II+  + A QA  +    +
Sbjct: 302 SEKIRTYNFPQGRVTDHRIGLTLYKLDKILNGDIQEIIDACIAADQAAKLSKMED 356


>gi|121603686|ref|YP_981015.1| peptide chain release factor 1 [Polaromonas naphthalenivorans CJ2]
 gi|166223585|sp|A1VKB6|RF1_POLNA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120592655|gb|ABM36094.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas
           naphthalenivorans CJ2]
          Length = 373

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 166/367 (45%), Positives = 239/367 (65%), Gaps = 11/367 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M       +     R  E++  +S S  V   D +  LT E+A  S +  + +    ++ 
Sbjct: 1   MKPFLRHTLDRQLLRLHELDALLSASDVVSDLDRFRALTREHAEASVVAEQYNRLTAREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +     +++ +  +D ++ ++A+ E+ A + +I +L+  +  +L+PKD DD ++  +EIR
Sbjct: 61  DLASAESMLAEAKNDPDMAEMAEEEINAAKTDIAQLDEALQLMLIPKDPDDRRAAFIEIR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------ 171
           AGTGG E+ALF GDLFR+Y R+A  ++W+VE++S S ++ GGYKE+V  I G        
Sbjct: 121 AGTGGDESALFAGDLFRLYTRFAERKRWQVEIISESPSELGGYKEVVLRIDGPTDAMGVG 180

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRAS 230
           V+ +++FESG HRVQRVPATE  GR+HTSA TVAVLPE  E   + I   D+RIDT RAS
Sbjct: 181 VYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDETVAIQINPADLRIDTYRAS 240

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQH+N TDSAVRITH+PTGI+      +SQH N+ +AMKVL AR+++ ER   A + 
Sbjct: 241 GAGGQHINKTDSAVRITHLPTGIVAECQEGRSQHGNKAQAMKVLTARIHEKERSAQAAKD 300

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +A RK  IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  +++G +DD++  L  A  A
Sbjct: 301 AAMRKGLIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLTIMEGDLDDVVTALQVARGA 360

Query: 350 KMIGSAS 356
           + +    
Sbjct: 361 EQLNELE 367


>gi|254293181|ref|YP_003059204.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814]
 gi|254041712|gb|ACT58507.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814]
          Length = 359

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 182/358 (50%), Positives = 260/358 (72%), Gaps = 1/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  +S +++  + +RF + E RMS +      ++L++++A +  +  K       ++   
Sbjct: 1   MAAVSAERLTQVIDRFEQTEARMSVATDPTEIVQLSKDHAELKLVADKARELMDAREALA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++ D +SD+++++LAQ E   ++  + ELE  +  LLLPKD DD+ + +LE+RAGT
Sbjct: 61  EADAILSDKDSDADMKELAQEEREELKSSLPELEQSLQLLLLPKDEDDEANAMLEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLFRMY+RYA ++ WK+++ S S+ D GGYKEI+A+++G+GVF +MKFES
Sbjct: 121 GGDEAALFAGDLFRMYQRYAQIQGWKLDIESQSEGDAGGYKEIIASVTGKGVFGKMKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE++GR+HTSAA+VAVLP   +++++I  E+IRIDTMR+SG+GGQHVNTT
Sbjct: 181 GVHRVQRVPKTESAGRIHTSAASVAVLPAPEQVNIEIKPEEIRIDTMRSSGAGGQHVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRI H+PT IMVTSSEKSQH NR RAM++L+ RLY+ ER       +  RK Q+GSG
Sbjct: 241 DSAVRIIHLPTNIMVTSSEKSQHANRARAMEMLKIRLYEKERAEKDAAMADARKTQVGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           DRSE+IRTYNF + R++DHRI LTLYKLE +L G  I ++I+ L+   QA  + +  E
Sbjct: 301 DRSEKIRTYNFPENRVSDHRIKLTLYKLEQILAGDSISEVIDALIAEDQAARLAAMEE 358


>gi|326571210|gb|EGE21234.1| peptide chain release factor 1 [Moraxella catarrhalis BC7]
          Length = 359

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 170/361 (47%), Positives = 246/361 (68%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  + +RF E+ + +S+  ++     + +L+ E++ +S I +    + Q + 
Sbjct: 1   MKESLRHRLDQMVDRFEEVTVLLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q  + ++    SD E++++A  E+      I  LE  +N ++LPKD +D  +  LEIR
Sbjct: 61  DLQTANELL----SDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY++Y   + W+VEVLS+++ + GGYKEI+A +SG GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+PE    D  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTG++     E+SQH N+ +AMK+L AR+   + +   +  S  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQAQIDATSDMRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ +++G + ++++ LL  H A ++ S 
Sbjct: 297 LVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLLREHHADLMASV 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|326692970|ref|ZP_08229975.1| peptide chain release factor 1 [Leuconostoc argentinum KCTC 3773]
          Length = 357

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 141/359 (39%), Positives = 221/359 (61%), Gaps = 9/359 (2%)

Query: 3   FLSHKQ-ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQE 58
                Q +  + +R+ E+  ++++        K   L++E   +   +   + Y Q  QE
Sbjct: 1   MDPIFQSLQTVVDRYDELNEQLADPEVASDGQKYMALSKEAGEMRETVEVYTRYQQVIQE 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            Q+   ++     D+E+  LA+ ++  ++ E  +LE+++  L+LPKD +DDK+ I+EIR 
Sbjct: 61  IQEAEELL----DDAEMAPLAKEDLADLKPEKAQLEDQLKILMLPKDPNDDKNIIMEIRG 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E++LF  DL  MY RYA  ++W + ++  S  + GGYKE+   I+G  V+S++KF
Sbjct: 117 AVGGDESSLFAADLLDMYRRYAEKQRWTLSIIDESMTEVGGYKEVAVMITGDNVYSKLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVP+TE  GRVHTS ATV V+PE  +ID ++   D+  +  R+ G+GGQ+VN
Sbjct: 177 ESGAHRVQRVPSTETQGRVHTSTATVGVMPEFEDIDFELAESDLEEEFFRSGGAGGQNVN 236

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
              +AVR+ H PTGIMV    E++Q +NR +A K+L +R+YD   ++     +  RK  +
Sbjct: 237 KVSTAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAAYAEQRKSAV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+GDRSERIRTYN+ Q R+TDHRI LTL KL+ V+ G + ++I+ L+ A Q   +   +
Sbjct: 297 GTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELGEVIDALIIADQTAKLAELN 355


>gi|291334339|gb|ADD93998.1| peptide chain release factor 1 [uncultured marine bacterium
           MedDCM-OCT-S11-C310]
          Length = 355

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 240/353 (67%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +++ R+ E+   +++       +    + +E+  +  ++     Y Q + + QD   
Sbjct: 4   KLAEVEARYEELNRLLADPVVLSDQNRLRDVAKEHREVEELVEIYRSYRQLETQIQDNKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I D   D E+ +LA+ E+  +E E++ L ++IN LL+PKD +DDK+ +LEIRAGTGG E
Sbjct: 64  LIADGE-DPELTELAKEELPELETELQNLTDKINVLLMPKDPNDDKNVLLEIRAGTGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA    W+V+V+S S+   GG KE++  +     F  +K+ESGVHR
Sbjct: 123 AALFAGDLFRMYSRYAERSGWRVDVMSMSEGTQGGVKEVIVWLRATTFFC-VKYESGVHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTSAATVAV+PEA E ++DI  ED+RIDT R+ G+GGQHVNTTDSAV
Sbjct: 182 VQRVPATESQGRIHTSAATVAVMPEAEEAEIDIRNEDLRIDTYRSQGAGGQHVNTTDSAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTG++V    EKSQ +NR +AMKVL +RL D  R++ A ER+A RK  + +GDRS
Sbjct: 242 RITHLPTGMVVQCQDEKSQIKNRAKAMKVLSSRLLDFIRQKEAAERAAERKELVRTGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYNF Q RITDHRI  + + L  VLQG ++ ++  L T  Q++ +    
Sbjct: 302 EKIRTYNFPQDRITDHRIGFSAHNLPAVLQGDLEAVLIALRTYFQSEELKGQE 354


>gi|15900891|ref|NP_345495.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4]
 gi|111658249|ref|ZP_01408941.1| hypothetical protein SpneT_02000563 [Streptococcus pneumoniae
           TIGR4]
 gi|20139341|sp|Q97R20|RF1_STRPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14972493|gb|AAK75135.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4]
          Length = 359

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 157/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    +     Y Q  Q  
Sbjct: 1   MNIYDQLQVVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ +LA+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|261880577|ref|ZP_06007004.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361]
 gi|270332696|gb|EFA43482.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361]
          Length = 369

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 149/360 (41%), Positives = 222/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++RF E++  +++   +     Y+KLT+EY  +S I+     Y       ++  
Sbjct: 8   EKLDGLESRFEEVKTLITDPSVIADQKRYVKLTKEYKDLSDIMDARKRYIDCLNAIKESK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + SD++++++A+ E+   E    +LE EI   L+PKD +D K+  +EIRAG GG 
Sbjct: 68  DIMT-NESDADMKEMAREELSINESLQPQLEEEIKMALVPKDPEDAKNVQMEIRAGAGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+++   + W V V S S+   GGYKEI   +SG  V+  +K+ESGVH
Sbjct: 127 EAALFAGDLFNMYKKFCDTKGWSVSVTSVSEGSVGGYKEIDFAVSGDNVYGVLKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 187 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 246

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  L   +YD ER +  N+ S+ RK
Sbjct: 247 VRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHERSKYLNDISSRRK 306

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYNF QGRITDHRI  T + L+  L G I D+I+ L  A  A+ +  
Sbjct: 307 SLVSTGDRSAKIRTYNFPQGRITDHRIGYTTHDLQGFLGGDIQDMIDHLTVAENAEKLKE 366


>gi|78185965|ref|YP_374008.1| peptide chain release factor 1 [Chlorobium luteolum DSM 273]
 gi|119361573|sp|Q3B6R6|RF1_PELLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78165867|gb|ABB22965.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           luteolum DSM 273]
          Length = 358

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 231/355 (65%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +K R  ++E  +++         + +L +EY+ +  I+     Y   +Q+ ++  
Sbjct: 3   DKLQSIKERHLDLERMLADPAAAGDQTRFRRLNKEYSDLKEIVQAYDRYASARQQLEESR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +      D E++ +A+ E+L +E+ I  LE E+  LLLPKD  D ++ I+EIRAGTGG 
Sbjct: 63  HM-QKAEEDPEMKAMAREEMLELEERIPGLEQELRILLLPKDEADSRNVIMEIRAGTGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDN-DDGGYKEIVATISGRGVFSRMKFESGV 182
           EAALF  DL RMY+RYA  + W+ EVL  +++   GG++E+  TISG  V+  +K+ESGV
Sbjct: 122 EAALFAADLMRMYQRYAERQGWRCEVLDYNESSGPGGFREVTLTISGHDVYGTLKYESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAA+VAVLPEA E+DV+I  +D+R DT R+ G GGQ+VN  ++
Sbjct: 182 HRVQRVPETETQGRIHTSAASVAVLPEAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKVET 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH PTG++     E+SQ QN+ RAMK+L A+LYD++ +    ER+  R+  + SGD
Sbjct: 242 AVRITHEPTGLVAACQEERSQLQNKERAMKMLMAKLYDIKLQEQQQERADMRRTMVASGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RS +IRTYN+ Q R+TDHRI  T + L + +QG I ++I+ L    Q + +  A+
Sbjct: 302 RSAKIRTYNYPQSRVTDHRIGFTSHGLPHFMQGEIGELIDALKMHDQTERLQEAA 356


>gi|310644400|ref|YP_003949159.1| peptide chain release factor 1 [Paenibacillus polymyxa SC2]
 gi|309249351|gb|ADO58918.1| Peptide chain release factor 1 [Paenibacillus polymyxa SC2]
          Length = 355

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 238/354 (67%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +    +   KL   ++E + + P     + Y    +E   
Sbjct: 1   MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKTVVEELDA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  +   D E+R++ ++E+  +    REL+ +I  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKAMQAEKLDD-EMREMVKMEIEELSARKRELDEKIRILLLPKDPNDDKNVIIEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA  + W+VE++ ++ ND GG+KE++  I+GRG +S+MKFESG
Sbjct: 120 GDEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+P TE+ GR+HTS +TV+V+PEA E+D++I  +DIR+DT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPTTESGGRIHTSTSTVSVMPEAEEVDIEILDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+      KSQ+ N+ +A++VLRAR+ D+ R+    + +  RK ++G+G
Sbjct: 240 SAVRVTHMPTGIVATCQDGKSQNSNKEKALQVLRARISDMMRQEEEAKYAGERKSKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF Q R+TDHRI LT++KL+ V+ G I++I++ L  A QA ++  
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQADLMEQ 353


>gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745]
 gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus
           pentosaceus ATCC 25745]
          Length = 359

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 229/357 (64%), Gaps = 5/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
               +++  + +R+ E+   +++   +     Y +L++E   I   + K   Y +     
Sbjct: 1   MDIIEKVQAVADRYEELSELLADPEVLGDSQRYQELSKEEGEIRETVEKYREYRKTVDAI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   +      D E+  L + E+  + +    LE EI  L+LP D +DDK+ I+EI   
Sbjct: 61  AENEEL-QREKLDPEMDSLVKAELAELRETKATLEEEIKILMLPTDPNDDKNIIMEIHGA 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA+LF  DL+ MY RYA  + WKVEV+  +  D GG+KEIV  ISG  V+S++K+E
Sbjct: 120 AGGDEASLFAADLYNMYTRYAETQGWKVEVVDENATDVGGFKEIVLMISGNKVYSKLKYE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           +G HRVQRVP TE++GRVHTS +TV V+PEA ++D++I  +DIR D  R+SG+GGQH+N 
Sbjct: 180 NGAHRVQRVPVTESAGRVHTSTSTVGVMPEAEDVDIEIDQKDIRTDVYRSSGAGGQHINK 239

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH+PTGI+V    E+SQ QNR +AM++L+AR+YD  + +  +  +A RK  +G
Sbjct: 240 TSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKARVYDYYQTQEEDAYNAERKSAVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ V+ G +DDII+ L+   QAK +   
Sbjct: 300 TGDRSERIRTYNFPQNRVTDHRIGLTLNKLDRVMNGELDDIIDALILDDQAKKVEQL 356


>gi|284007355|emb|CBA72733.1| peptide chain release factor 1 [Arsenophonus nasoniae]
          Length = 349

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 247/351 (70%), Gaps = 9/351 (2%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           ++ R+ EI+  + ++  +     +  L++EYA ++ +      +   +Q+ +   T++  
Sbjct: 1   MQERYEEIQAHLVDAEVIADQERFRALSKEYAQLTDVTKCFQSWRAVQQDIETAETLL-- 58

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E+R++AQ E+   +K   E E ++  LLLPKD DD+K+C LEIRAGTGG EAA+F
Sbjct: 59  --HDPEMREMAQEELKEAKKRNEEFEQQLQILLLPKDPDDEKNCFLEIRAGTGGDEAAIF 116

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            GDLFRMY RYA  R+W++EV+++S+ + GGYKEI+A +SG  V+ R+KFESG HRVQRV
Sbjct: 117 AGDLFRMYNRYAESRRWRIEVMNASEGEHGGYKEIIAKVSGDSVYGRLKFESGGHRVQRV 176

Query: 189 PATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           P TE+ GR+HTSA TVA+L E    +  DI   D+RIDT R+SG+GGQHVNTTDSA+RIT
Sbjct: 177 PETESQGRIHTSACTVAILAEIPATELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRIT 236

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTGI+V    E+SQH+N+ +A+ VL AR+   E ++     ++ R+  +GSGDRS+RI
Sbjct: 237 HIPTGIVVECQDERSQHKNKAKALSVLAARIRAAEVQKRREAEASERRNLLGSGDRSDRI 296

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RTYNF QGRITDHRINLTLY+L+ V++G +D +I P++  +QA  + + SE
Sbjct: 297 RTYNFPQGRITDHRINLTLYRLDEVIEGKLDMLIQPIINEYQADQLSALSE 347


>gi|330823524|ref|YP_004386827.1| peptide chain release factor 1 [Alicycliphilus denitrificans K601]
 gi|329308896|gb|AEB83311.1| Peptide chain release factor 1 [Alicycliphilus denitrificans K601]
          Length = 371

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 165/361 (45%), Positives = 241/361 (66%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R +E++  +S    +     Y  ++ E+A ++ +  + + Y Q++ 
Sbjct: 12  MKPFLRSQLERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREA 71

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D ++ ++AQ E+ A E E+ +LE+E+  +LLPKD DD+++  +EIR
Sbjct: 72  DLEGAREMLE----DPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIR 127

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYAA + WKVEV+S+++++ GGYKE+V  I G   + R++
Sbjct: 128 AGTGGDESALFAGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLR 187

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PE  E         D+RIDT RASG+GGQH
Sbjct: 188 FESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQH 247

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A + +A RK 
Sbjct: 248 INKTDSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSERAAKEAALRKG 307

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  V++G + +++  L  A +A+++   
Sbjct: 308 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAREAELLAEL 367

Query: 356 S 356
            
Sbjct: 368 E 368


>gi|195978153|ref|YP_002123397.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868513|ref|YP_002744461.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus]
 gi|238689817|sp|B4U317|RF1_STREM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585255|sp|C0MF07|RF1_STRS7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195974858|gb|ACG62384.1| peptide chain release factor 1 PrfA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225701789|emb|CAW99200.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 360

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 231/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y    Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRETVAAYRQYKAIIQSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D +I ++A+ E+   +      E+++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  DDAEEMIKEAGGDPDIEEMAKEELKEAKAAKETYEDKLKLLLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY+++A  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+I++ L+   Q + + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEIVDALVLYDQTQKLESLN 358


>gi|225861003|ref|YP_002742512.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230460|ref|ZP_06964141.1| peptide chain release factor 1 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255330|ref|ZP_06978916.1| peptide chain release factor 1 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502960|ref|YP_003724900.1| peptide chain release factor 1 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|254790904|sp|C1CRE0|RF1_STRZT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225726985|gb|ACO22836.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238555|gb|ADI69686.1| peptide chain release factor 1 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389396|gb|EGE87741.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04375]
 gi|332201491|gb|EGJ15561.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47368]
          Length = 359

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    +     Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+ E  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMLEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 358


>gi|220920161|ref|YP_002495462.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
 gi|254790889|sp|B8IUB4|RF1_METNO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219944767|gb|ACL55159.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
          Length = 359

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 186/359 (51%), Positives = 250/359 (69%), Gaps = 5/359 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M+ +   ++  +  R   +   +S      +++++L+ E + +  +++ I  Y     E 
Sbjct: 1   MIAIPSDRLDAILARHDIVTATLSAGEADSESFVQLSRELSDLDDVVAAIRAYRAADAEL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + +  ++     D E+R LA  E   +E         +  LLLPKD+ D+KS ILEIRAG
Sbjct: 61  RGVEAML--EEGDPEMRALAAEEKPEVEAARDAAAKALQILLLPKDSADEKSAILEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY RYA L+ WKVEV+S S    GGY+E+VA + GRGVF+R+KFE
Sbjct: 119 TGGDEAALFAGDLFRMYARYADLKGWKVEVVSESPGTMGGYREVVAEVKGRGVFARLKFE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE  GR+HTSAATVAVLPEA E+D+ +   D++IDTMRA G+GGQHVN 
Sbjct: 179 SGAHRVQRVPETETQGRIHTSAATVAVLPEAEEVDIHVNEADLKIDTMRAQGAGGQHVNK 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA+RITH+P+GI+V    E+SQH+NR RAM VLRARLY+ ER +    R+A+R+ Q+G
Sbjct: 239 TESAIRITHMPSGIVVFVQEERSQHKNRARAMAVLRARLYEQERSQKDAARAADRRAQVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHRINLTLYKLE VL G  +D++++ L+T HQA ++ +  
Sbjct: 299 SGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVLAGTALDELVDALVTEHQAALLAAEG 357


>gi|227499754|ref|ZP_03929854.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
           35098]
 gi|227218140|gb|EEI83406.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
           35098]
          Length = 358

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 160/355 (45%), Positives = 227/355 (63%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + I  +K  + ++E +M +      +    K+T EY ++ PI+ K       +   ++  
Sbjct: 3   ENIEHIKENYKDLEKKMIDPEVLADISRLTKITREYNSLKPIVEKYDQIKDAESTIEENK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I +   D ++ D+ + E+   EK + +   E+  LL+PKD +D +  I+EIR G GG 
Sbjct: 63  ELINEA-DDQDMIDMLKEEIKENEKLLDQYNEEMKILLIPKDPNDSRDVIVEIRPGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF GDL+RMY  YA    +K E +  +    GG K+    + G G +SR K+ESGVH
Sbjct: 122 EAGLFAGDLYRMYHMYADKEGYKTEDVEVTPQGVGGIKDATFMVRGEGAYSRFKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  E+DV +   DIR D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVDELDVHVDPNDIRTDVFRSSGNGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   EKSQ +N+ +AMK+L AR+Y++E ++   E + NRK Q+G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKEIADNRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGRITDHRIN T+Y+L+  L G I ++I+ L+   Q + +    E
Sbjct: 302 SERIRTYNFPQGRITDHRINKTIYQLDDFLNGGIGEMIDSLIAEDQTRKLEKIGE 356


>gi|27375329|ref|NP_766858.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
 gi|32171530|sp|Q89XT9|RF1_BRAJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27348465|dbj|BAC45483.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
          Length = 361

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 190/349 (54%), Positives = 250/349 (71%), Gaps = 2/349 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E       + + Y+++T E A I+P+I  +  Y    +E  
Sbjct: 1   MSSLPEAKLDVLLAHHASLEAESLGQLASERYVQITRELAEITPLIEAVKTYRSAVKELA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +I D  +D+E+R +A+ E   +   I +L  +I   LLPKD  DD++ +LEIRAGT
Sbjct: 61  DTEALIADPATDAEMRGMAEAERDELAPRIEDLVQKIRVALLPKDAMDDRNVVLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYER+A+L+ WKVEV+S+S+   GGYKEI+A + GRG FS++KFES
Sbjct: 121 GGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFSKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  ++DVDI  +D+RI+TMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKNDDLRIETMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITHIPTGI+V     +SQH+NR  AM +LR+R+YD ER+R+   RSA RK ++GS
Sbjct: 241 ESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRVDAARSAERKEKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T H
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEH 349


>gi|322517017|ref|ZP_08069906.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
           49124]
 gi|322124434|gb|EFX95931.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
           49124]
          Length = 359

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 154/358 (43%), Positives = 231/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I + + D ++ ++A+ E+   +    E E  +  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ +V+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLAMYQKYAETQGWRFDVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQTQKLEELN 358


>gi|313888275|ref|ZP_07821946.1| peptide chain release factor 1 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845678|gb|EFR33068.1| peptide chain release factor 1 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 355

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++   +++  E+E  +S    ++    Y +   E+A I PI++K   Y +      +  
Sbjct: 3   EKLSVFEDKLIELEKDLSSVEVINDSKLYQQKAIEHAEIEPIVTKYRAYKETLNSLNENK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I +   D + +DL + E+    K++ ELENE+  LL+PKD +D K+ ++EIRAG GG 
Sbjct: 63  ELIKEKLDD-DFKDLVREEINEATKKVEELENELKILLIPKDKNDSKNVMVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G L+R Y RYA    ++VE +SS++   GGYKEIV  I G G +SR+K+ESGVH
Sbjct: 122 EAALFAGVLYRQYVRYAERSGFRVETISSNEIGIGGYKEIVFMIIGNGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPEA ++D++I    I+ D  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEAEDVDIEIDPTQIKFDVFRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI++    EKSQ +N+ +AMK+LR++LYD++ +  + + S  R  QIG+GDR
Sbjct: 242 VRLTHIPTGIVISCQDEKSQLRNKEKAMKLLRSKLYDLKLQEQSEKESMERSSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ QGR+TDHRINLT ++++ +  G +D+II+ L+T  Q + I   S
Sbjct: 302 SERIRTYNYPQGRVTDHRINLTSHRIDAINDGDLDEIIDALITYDQTQKIEKIS 355


>gi|91786752|ref|YP_547704.1| peptide chain release factor 1 [Polaromonas sp. JS666]
 gi|119361575|sp|Q12F86|RF1_POLSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91695977|gb|ABE42806.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas sp.
           JS666]
          Length = 373

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 163/367 (44%), Positives = 236/367 (64%), Gaps = 11/367 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     + +     R  E++  +S +  V   D +  LT E+A  S +  + +    ++ 
Sbjct: 1   MKPFLRQTLDRQLLRLHELDSLLSATDVVSDLDRFRALTREHAEASVVAEQYTRLTSREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ +   D E+  +A+ E+ A + +I +L+  +  +L+PKD DD ++  +EIR
Sbjct: 61  DLASAEGMLAEAKDDPEMAAMAEEEIAAAKLDIAQLDEALQLMLIPKDPDDARAAFIEIR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------ 171
           AGTGG E+ALF GDLFRMY R+A   +W+VE++S S ++ GGYKE+V  + G        
Sbjct: 121 AGTGGDESALFAGDLFRMYTRFAERNRWQVEIISESPSELGGYKEVVLRMDGPTDATGVG 180

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRAS 230
           V+ +++FESG HRVQRVPATE  GR+HTSA TVAVLPE  E   + I   D+RIDT RAS
Sbjct: 181 VYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDEAVAIQINPADLRIDTYRAS 240

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQH+N TDSAVRITHIPTGI+     ++SQH+N+ +A++VL AR+ + +R   A + 
Sbjct: 241 GAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIVEKDRSERAAKD 300

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +A RK  +GSGDRS+RIRTYNF QGR+TDHRINLTLYKL  +++G + D+I  L  A  A
Sbjct: 301 AAMRKGLVGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAIMEGDLGDVITALQVARGA 360

Query: 350 KMIGSAS 356
           + +    
Sbjct: 361 EQLAELE 367


>gi|288928094|ref|ZP_06421941.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330928|gb|EFC69512.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 370

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 145/370 (39%), Positives = 223/370 (60%), Gaps = 17/370 (4%)

Query: 3   FLSHK----QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQK 55
            +       ++  L++R+ E+   +++   +     Y+KLT EY  +  I++    Y   
Sbjct: 1   MIEQNSILTKLDGLESRYEEVSTLITDPAVIADQERYVKLTREYKDLGDIMNARKRYVAC 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
                +   ++  + SD+E++++A+ E+ A E E  +LE EI  LL+PKD +D K+  +E
Sbjct: 61  LNSIAEAKDILA-NESDAEMKEMAREELSANETERPKLEEEIKLLLVPKDPEDAKNVQME 119

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           IRAGTGG EAALF GDLF MY+R+   + W + V +SS+   GG+KEI   +SG  V+  
Sbjct: 120 IRAGTGGDEAALFAGDLFGMYKRFCDSKGWNLSVTASSEGAVGGFKEIDFAVSGDNVYGV 179

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           +K+ESGVHRVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ
Sbjct: 180 LKYESGVHRVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQ 239

Query: 236 HVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           +VN  +S VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  
Sbjct: 240 NVNKVESGVRLRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYV 299

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           ++ +  RK  + +GDRS +IRTYN+ QGR+TDHRI  T + L+  + G I  +I+ L  A
Sbjct: 300 DDIANRRKSLVSTGDRSAKIRTYNYPQGRVTDHRIGYTTHDLQGFIAGDIQAMIDALSVA 359

Query: 347 HQAKMIGSAS 356
              + +  A 
Sbjct: 360 ENTERMKEAE 369


>gi|22537235|ref|NP_688086.1| peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
 gi|32171547|sp|Q8DZM4|RF1_STRA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22534102|gb|AAM99958.1|AE014241_9 peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
          Length = 359

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A+    ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEASTRETVTAYREYKQVIQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+E+ ++A+ E+   +    E E  +  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + + + +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEALN 358


>gi|154174699|ref|YP_001407404.1| peptide chain release factor 1 [Campylobacter curvus 525.92]
 gi|166223540|sp|A7GW12|RF1_CAMC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112802322|gb|EAT99666.1| peptide chain release factor 1 [Campylobacter curvus 525.92]
          Length = 355

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 179/355 (50%), Positives = 246/355 (69%), Gaps = 9/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++    +R+ EI   + +   ++   K   L++E ++I PI +  S Y Q   + ++  
Sbjct: 4   DKLRPFLDRYNEISALLGDPNIINDIEKMTKLSKEQSSIEPIKNAASQYLQTLDDIEENK 63

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D+E+ +LA+ E+ + +    ELENEI  LLLPKD +DDK+  LEIRAGTGG 
Sbjct: 64  ALL----DDAELGELAREELKSAQIRKEELENEIKILLLPKDPNDDKNIFLEIRAGTGGD 119

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFVGDLF  Y RYA LR +K E++S S+   GG+KEI+  I G+G +SR+KFE G H
Sbjct: 120 EAALFVGDLFNAYIRYADLRGYKFEIVSQSEGSAGGFKEIILLIKGKGAYSRLKFEGGTH 179

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTSA TVA++PE  + +++I   D+RID MR+SG GGQ VNTTDSA
Sbjct: 180 RVQRVPETESQGRVHTSAVTVAIMPEVEDSEIEINPNDLRIDVMRSSGHGGQSVNTTDSA 239

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG++VT    KSQH+N+  AMKVL+ARLY+++      + ++ RK Q+G+GDR
Sbjct: 240 VRITHIPTGLVVTNQDGKSQHKNKEAAMKVLKARLYEMQEAERIAKETSERKSQVGTGDR 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSAS 356
           S RIRTYNF Q RI+DHRINLTLY+L+ ++ G + D+II PL+  HQA+ I  A 
Sbjct: 300 SGRIRTYNFPQNRISDHRINLTLYRLDAIMAGGLFDEIIEPLIAHHQAEAITDAG 354


>gi|58584615|ref|YP_198188.1| peptide chain release factor 1 [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|75497913|sp|Q5GSS8|RF1_WOLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58418931|gb|AAW70946.1| Protein chain release factor A [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 359

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 184/359 (51%), Positives = 250/359 (69%), Gaps = 5/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 + DLK +F  IE ++    ++    +I L++EY+ + PII  I+ YD  K+E  
Sbjct: 1   MDIENNLQDLKRKFNYIERKLENPTNLSQKEFINLSKEYSELRPIIKIINEYDTLKKEIL 60

Query: 61  DLHTVIGDHNSDSEIRD-LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           DL  +I D NS+ +I++   +      +  + +++ ++   LLPKD DD ++ ILEIRAG
Sbjct: 61  DLEEIIKDENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF   LFRMY++YA  R WK E +S S    GGYKE  A I+G  VF+R+KFE
Sbjct: 121 TGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+SGR+HTSAATVA+LPE  E+D  I  +D+RID  R+SG GGQ VNT
Sbjct: 181 SGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKDLRIDVYRSSGPGGQSVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH+PT ++V    EKSQH+N+ +A+KVLRARLY++ER++   ERS  RK QIG
Sbjct: 241 TDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEIERSTMRKSQIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF Q RITDHRINLT ++LE ++ +G +D+ I  L++ ++A+ +   S
Sbjct: 301 SGDRSERIRTYNFPQSRITDHRINLTSHQLEQIIKEGELDEFIEVLISRNEAERLAGES 359


>gi|225870517|ref|YP_002746464.1| peptide chain release factor 1 [Streptococcus equi subsp. equi
           4047]
 gi|254790898|sp|C0MC15|RF1_STRE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225699921|emb|CAW93851.1| peptide chain release factor 1 [Streptococcus equi subsp. equi
           4047]
          Length = 360

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 231/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     ++ L++E A+    ++    Y    Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRETVAAYRQYKAIIQSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D +I ++A+ E+   +      E+++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  DDAEEMIKEAGGDPDIEEMAKEELKEAKSAKEAYEDKLKLLLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY+++A  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+RID   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+I++ L+   Q + + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEIVDALVLYDQTQKLESLN 358


>gi|332521778|ref|ZP_08398229.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4]
 gi|332042608|gb|EGI78809.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4]
          Length = 358

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 159/357 (44%), Positives = 230/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K RF E+   + +   +     Y++L  EY  +  ++ K  +Y +      +
Sbjct: 1   MLEKLQIVKQRFDEVSDLIIQPDIITDQKRYVELNREYKDLRLLMDKRELYLEFTNNLAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD E+ ++A+++    +  I ELE EI  LL+PKD  D K+ ++E+RAGTG
Sbjct: 61  AEEIIAD-GSDPEMVEMAKMQYDEAKTAIPELEEEIKVLLIPKDPQDAKNAVVELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDL+RMY +Y   + W+V+ +  S+  +GG+KEI   +SG  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLYRMYTKYCESKGWRVDTVDYSEGTNGGFKEIQFEVSGDDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV V PEA E DV+I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVFPEAEEFDVEIDPKDVRIDYFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTG++     +KSQH+N+ +A KVLR+RLYD+E  +   E +A R   + SG
Sbjct: 240 SAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKMEEDAALRGTMVTSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+ QGR+TDHRI LTLY L  ++ G I  II+ L+ A   + + + S+
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLSNIVNGDIQKIIDELMLAENTEKLKANSD 356


>gi|170017816|ref|YP_001728735.1| peptide chain release factor 1 [Leuconostoc citreum KM20]
 gi|238692786|sp|B1MVN7|RF1_LEUCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169804673|gb|ACA83291.1| Peptide chain release factor 1 [Leuconostoc citreum KM20]
          Length = 357

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 142/359 (39%), Positives = 220/359 (61%), Gaps = 9/359 (2%)

Query: 3   FLSHKQ-ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQE 58
                Q +  + +R+ E+  ++++         Y+ L++E   +   +     Y Q  Q+
Sbjct: 1   MDPIFQSLQTVVDRYDELNEQLADPEIAGDGQKYMALSKEAGEMRETVETYLHYQQVLQD 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             D   ++     D+E+  LA+ ++  ++ E   LE+++  L+LPKD +DDK+ I+EIR 
Sbjct: 61  IADAEDLL----DDAEMAPLAKEDLNTLKPEKEALESQLKILMLPKDPNDDKNIIMEIRG 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E++LF  DL  MY RYA  ++W + ++  +  + GGYKE+   I+G  V+S++KF
Sbjct: 117 AAGGDESSLFAADLLDMYRRYAEKQRWTLSIIDETLTEVGGYKEVAVMITGDNVYSKLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVPATE  GRVHTS ATV V+PE  EID ++   D+  +  R+ G+GGQ+VN
Sbjct: 177 ESGAHRVQRVPATETQGRVHTSTATVGVMPEFQEIDFELAESDLEEEFFRSGGAGGQNVN 236

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
              +AVR+ H PTGIMV    E++Q +NR +A K+L +R+YD   ++   E +  RK  +
Sbjct: 237 KVSTAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+GDRSERIRTYN+ Q R+TDHRI LTL KL+ V+ G + ++I+ L+ A Q   +   +
Sbjct: 297 GTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELGEVIDALVIADQTAKLAELN 355


>gi|25011160|ref|NP_735555.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
 gi|76798425|ref|ZP_00780665.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
 gi|77408667|ref|ZP_00785400.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
 gi|77410552|ref|ZP_00786913.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
 gi|77413289|ref|ZP_00789485.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|32171550|sp|Q8E5C3|RF1_STRA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23095559|emb|CAD46768.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
 gi|76586220|gb|EAO62738.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
 gi|77160676|gb|EAO71791.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|77163500|gb|EAO74450.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
 gi|77172715|gb|EAO75851.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
 gi|319745079|gb|EFV97405.1| peptide chain release factor RF1 [Streptococcus agalactiae ATCC
           13813]
          Length = 359

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+E+ ++A+ E+   +    E E  +  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + + + +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEALN 358


>gi|299135937|ref|ZP_07029121.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8]
 gi|298602061|gb|EFI58215.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8]
          Length = 356

 Score =  269 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 165/352 (46%), Positives = 243/352 (69%), Gaps = 6/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ ++  ++ +   V    K   + +++  + P + K   Y + +    +  
Sbjct: 3   DRLDQIEERYEDLGRQLGDPTLVSDQKKFQTVAKQHRDLEPTVDKFREYRKLRDGVAEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD+E+R +A+ E+L +E ++   E E+  LLLPKD +DDK+ I+E+RAGTGG 
Sbjct: 63  AMLTE--SDAEMRAMAEDELLTLEPKLATTEEELKVLLLPKDPNDDKNVIVELRAGTGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LFV ++FRMY R+A   KWKVEVLS +D+D GG K++ A   G  V+S+MK+ESGVH
Sbjct: 121 EASLFVAEVFRMYLRFAEQHKWKVEVLSQTDSDVGGLKDVTAIFEGDKVYSQMKYESGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSA TVAVLPEA E+DV +  +D+RIDT  +SG GGQ VNTT SA
Sbjct: 181 RVQRVPATETQGRVHTSAITVAVLPEAEEVDVKVEAKDLRIDTFCSSGPGGQSVNTTYSA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PT  +V    EKSQ +NR +AM+VLRARLY+VE +R+   ++  RK Q+G+GDR
Sbjct: 241 IRITHLPTNTVVSCQDEKSQIKNREKAMRVLRARLYEVEAERVHQLQAKERKQQVGTGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SE+IRTYNF Q R+TDHRI LT ++L  V++G +   ++ L+  + A+ + +
Sbjct: 301 SEKIRTYNFPQNRLTDHRIGLTNHQLAMVMEGLLQPTVDALIAHYTAERLRA 352


>gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1]
 gi|254790894|sp|C0QTI3|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1]
          Length = 361

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 175/355 (49%), Positives = 246/355 (69%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ ++  +  ++E  +S+   +    KL    +E+     +      Y +  ++ ++  
Sbjct: 8   QKLENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVLKDIEETK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++   N D E+R LA+ E+  + +   ELE EI   LLPKD +D+K+ ILEIR G GG 
Sbjct: 68  SLLN--NPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEIRQGAGGE 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G+LFRMY+RYA  + WKVEVLS    D GG KE++A I G+G +SR+KFESGVH
Sbjct: 126 EAALFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRLKFESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPEA E+D++I  E+++I+TMRASG+GGQHVNTTDSA
Sbjct: 186 RVQRVPETESSGRIHTSTATVAVLPEAEEVDIEIKPEELKIETMRASGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V    E+SQ QNR +AM++LRARL D   +    +    R++Q+G+GDR
Sbjct: 246 VRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRLEREKIEKERRMQVGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF Q R+TDHRIN T ++L  +L G +D+II+ L+   Q + + + SE
Sbjct: 306 SEKIRTYNFPQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIAKEQEQKLLAISE 360


>gi|15675118|ref|NP_269292.1| peptide chain release factor 1 [Streptococcus pyogenes M1 GAS]
 gi|20139346|sp|Q99ZP5|RF1_STRP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13622277|gb|AAK34013.1| putative peptide chain release factor 1 [Streptococcus pyogenes M1
           GAS]
          Length = 359

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 160/358 (44%), Positives = 232/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E       ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREETNTRETVTAYREYKQVIQTI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESLN 358


>gi|76788237|ref|YP_329784.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
 gi|77405475|ref|ZP_00782567.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
 gi|119361618|sp|Q3K119|RF1_STRA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76563294|gb|ABA45878.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
 gi|77175872|gb|EAO78649.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
          Length = 359

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDAELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + + + +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEALN 358


>gi|298373047|ref|ZP_06983037.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275951|gb|EFI17502.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 360

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 227/350 (64%), Gaps = 5/350 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L ++F EI   +++   +     ++KL +EYA +  II K   Y    +  Q+   
Sbjct: 8   RLDGLSSKFDEISTLITDPAIIADTKRFVKLNKEYADLEKIIKKRDEYSLLLKNLQEATD 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++A+ E+ A+   I  LE EI  LL+P D  D K+ I+EIR GTGG E
Sbjct: 68  LLA-TEKDEELREMARQEIDAVTPRIEPLEEEIKLLLVPADPQDGKNAIVEIRGGTGGDE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLF+MY RY   R WK EV S ++   GGYKEI+ ++SG  V+  +K+ESGVHR
Sbjct: 127 AAIFAGDLFKMYARYCESRGWKTEVTSFTEGTMGGYKEIIFSVSGDNVYGTLKYESGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTSAATVAVLPEA E D++I   DIR D   ASG GGQ VNTT SA+
Sbjct: 187 VQRVPATESQGRVHTSAATVAVLPEAEEFDIEIKESDIRTDIFCASGHGGQSVNTTYSAI 246

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+ HIPTGI V    EKSQ +N+ +AM  LR R+Y++E ++  ++ ++ RK  + SGDRS
Sbjct: 247 RLVHIPTGITVQCQDEKSQLKNKAKAMTELRTRIYNIEYQKYIDDIASKRKTMVSSGDRS 306

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
            +IRTYN+ QGRITDHRIN T Y L   + G I + I+ L  A  A+ + 
Sbjct: 307 AKIRTYNYPQGRITDHRINYTAYNLPAFVGGDIQECIDQLTIAENAERLK 356


>gi|94988610|ref|YP_596711.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS9429]
 gi|94990486|ref|YP_598586.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10270]
 gi|94992434|ref|YP_600533.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS2096]
 gi|94994408|ref|YP_602506.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10750]
 gi|139473768|ref|YP_001128484.1| peptide chain release factor 1 [Streptococcus pyogenes str.
           Manfredo]
 gi|119361619|sp|Q1JBR9|RF1_STRPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361620|sp|Q1JLQ2|RF1_STRPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361621|sp|Q1JGV2|RF1_STRPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361622|sp|Q1J6M1|RF1_STRPF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223610|sp|A2REH9|RF1_STRPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94542118|gb|ABF32167.1| bacterial peptide chain release factor 1 (RF-1) [Streptococcus
           pyogenes MGAS9429]
 gi|94543994|gb|ABF34042.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS10270]
 gi|94545942|gb|ABF35989.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS2096]
 gi|94547916|gb|ABF37962.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS10750]
 gi|134272015|emb|CAM30254.1| peptide chain release factor 1 [Streptococcus pyogenes str.
           Manfredo]
          Length = 359

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 161/358 (44%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDQKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESLN 358


>gi|183222627|ref|YP_001840623.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912661|ref|YP_001964216.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|238687790|sp|B0SH84|RF1_LEPBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687821|sp|B0SQV0|RF1_LEPBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167777337|gb|ABZ95638.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167781049|gb|ABZ99347.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 353

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 156/352 (44%), Positives = 234/352 (66%), Gaps = 2/352 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
              ++  ++ ++  IE  ++++ + D    L++E + ++P+ +K   Y +  ++ QD  +
Sbjct: 1   MIDRLKKIQEKYLRIEDELAKATASDTLKNLSKERSRLTPVYTKADEYLKITKDCQDAKS 60

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +  +D ++  + + E+   EK++ EL  E+  +LLP D +  KS ++EIRAGTGG E
Sbjct: 61  LL-ESENDPDMHSMLKSEIEEGEKKLEELAKELEIMLLPPDPNSGKSILVEIRAGTGGEE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           + LF  DLFRMY +YA  +  +VE++  S    GGYKEIV ++     +   KFESG HR
Sbjct: 120 SGLFCADLFRMYNKYADKKGLRVEIIDMSQTGIGGYKEIVFSLDDDKAYDLFKFESGTHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GR+HTSA TVA+LPEA E +V+I   D+RID  R+SG+GGQHVNTTDSAV
Sbjct: 180 VQRIPETESGGRIHTSAVTVAILPEAEEKEVEIKESDLRIDVYRSSGAGGQHVNTTDSAV 239

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V +  E+SQ +NR +AM+VLRAR+ D   +       A +K Q+GSGDRS
Sbjct: 240 RITHIPTGIVVASQEERSQIKNRDKAMRVLRARIADQAAETAKLSADALKKAQVGSGDRS 299

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           ERIRTYNF QGR TDHRI  T + L  +++G +D++I+ L+   ++K +  A
Sbjct: 300 ERIRTYNFPQGRCTDHRIGFTSHNLPAIMEGDLDELIDALIQEDRSKRLAEA 351


>gi|255323257|ref|ZP_05364392.1| peptide chain release factor 1 [Campylobacter showae RM3277]
 gi|255299780|gb|EET79062.1| peptide chain release factor 1 [Campylobacter showae RM3277]
          Length = 355

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 175/357 (49%), Positives = 243/357 (68%), Gaps = 9/357 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    +R+ E+   +S+      +    KL++E + +  I S    Y Q   + +
Sbjct: 1   MLADKLQPFLDRYDELSRLLSDPSITNDIANMTKLSKEQSNLEDIASAAKSYLQTLADIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++     D+E+ +LA+ E+  +E +   LE EI  LLLPKD +DDK+  LEIRAGT
Sbjct: 61  ENKALL----DDAELGELAKDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLF  Y RYA LR +K E++S S+ + GG+KEI+  I G+G +SR+KFE 
Sbjct: 117 GGDEAALFAGDLFNAYTRYAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTSA TVA++PE  + +++I   D+RID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRVHTSAVTVAIMPEVEDSEIEINPNDLRIDVMRSSGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+VT    KSQH+N+  AMKVL+ARLY+++ +    + ++ RK Q+G+
Sbjct: 237 DSAVRITHIPTGIVVTNQDGKSQHKNKEAAMKVLKARLYEIQEEERLAKETSERKSQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSA 355
           GDRS RIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+  +QA+ I  A
Sbjct: 297 GDRSGRIRTYNFPQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIAHYQAEAISDA 353


>gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
 gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
          Length = 363

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L+ R+ E+   + ++  +     + KL+ E+A ++ +++    Y + + +E +  
Sbjct: 9   DKMEALERRYQEVSDLLGQNEVISNRSEFTKLSREHAELAKLVAAWQEYRELRTQESEAR 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    SD+E+R+LA+ E+ A+++ +   E  I  LLLPKD +D K+ +LE+RAGTGG 
Sbjct: 69  AMVA-SESDAEMRELAREELRALQESLEVKEQHIKILLLPKDPNDGKNILLELRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL+RMY RYA  + WK E++S SD   GG KE V  I+G+ V+S +K+ESGVH
Sbjct: 128 EAALFAGDLYRMYMRYAERQGWKTEIMSMSDGAAGGMKEAVVLIAGKDVYSSLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GRVHTSAATV V+PEA E+D+ +  +D+RID  R+SG GGQ VNTTDSA
Sbjct: 188 RVQRVPATESQGRVHTSAATVVVMPEAEEVDIKLEEKDLRIDVYRSSGPGGQSVNTTDSA 247

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    EKSQH+N+ +AM++LR+R+ DVE  +   E    R+  + SGDR
Sbjct: 248 VRVTHLPTGIVVICQDEKSQHKNKAKAMRILRSRVLDVEIAKQEAEERDQRRSMVKSGDR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF Q R+TDHRINLT + L  VL G + D+++ L   +Q + +   +
Sbjct: 308 SEKIRTYNFPQDRLTDHRINLTRHNLSSVLDGDLYDVVDALRAHYQTEALKQQA 361


>gi|312890071|ref|ZP_07749615.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter
           paludis DSM 18603]
 gi|311297603|gb|EFQ74728.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter
           paludis DSM 18603]
          Length = 357

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 150/356 (42%), Positives = 223/356 (62%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K R+ ++E  +S    +     + ++ +EY  ++ ++ + +IY         
Sbjct: 1   MLDKLEAIKERWQDVERELSSPDIMKDMKRFAQMNKEYKDLTKVVEQYNIYYNVMSNIDS 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D E R++A+ E+  +  +  ELE +I  +L+PKD +D ++ I+EIR GTG
Sbjct: 61  NREILATEKDD-EFREMAKAELDELLPQQEELEEKIRLMLIPKDPEDSRNAIVEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY R+   + WK E++  ++   GGYKEIV  +     +  +K+ESG
Sbjct: 120 GDEAALFAGDLYRMYIRFCEKQGWKTELVDFTEGTAGGYKEIVFNVLAEDAYGTLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAA+V VLPEA E DVDI + DIR D   ASG GGQ VNTT 
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVVVLPEADEFDVDIHVNDIRKDLFCASGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+     +KSQ +N  +A++VLR+R+Y++E ++     S  RK  + +G
Sbjct: 240 SAVRLTHLPTGIVAQCQDQKSQLKNYDKALQVLRSRIYEMELQKHLEVISKKRKTMVSTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS +IRTYN+ QGR+T+HRI LT+Y L  V+ G + +I+  L  A  A+ +   S
Sbjct: 300 DRSAKIRTYNYPQGRVTEHRIGLTIYNLPEVMNGNLLEIMEALQFAENAEKLQEGS 355


>gi|219850039|ref|YP_002464472.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
 gi|254790871|sp|B8G7K1|RF1_CHLAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219544298|gb|ACL26036.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
          Length = 361

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 158/357 (44%), Positives = 218/357 (61%), Gaps = 9/357 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +  R+ E+   M++           +   E   +  I++    Y   ++   +  
Sbjct: 3   DKLEAVAQRYDELTQLMAQPEVATNVTLLQQYAREQRELEDIVTTYREYQAAQRAIAEAE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D E+R LAQ E+    K +  LE ++  LLLP+D +D K  I+EIR G GG 
Sbjct: 63  AMLDE--NDPELRALAQEELDTQRKRLATLEEQLKVLLLPRDPNDSKDVIMEIRQGEGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY R+A  R WKVEV S ++N  GG KE++  I G G +S++K+E GVH
Sbjct: 121 EAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTS ATVAVLPE  E +++I  ED+RID  R++G GGQ VNTTDSA
Sbjct: 181 RVQRVPATEARGRIHTSTATVAVLPEVEETEIEIKPEDLRIDVFRSAGHGGQGVNTTDSA 240

Query: 244 VRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           VRI + P      ++     +SQ QNR RAM VLRARLY  E+++   E  A+R  Q+GS
Sbjct: 241 VRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQREIGASRLAQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+R+E+IRTYNF Q RITDHRI      L  VL G +D II  L+    A+ + ++ 
Sbjct: 301 GERAEKIRTYNFPQDRITDHRIGQNFSNLPAVLDGELDKIIEALIVYDTAERLRASG 357


>gi|297182948|gb|ADI19096.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_34A12]
          Length = 353

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 185/353 (52%), Positives = 249/353 (70%), Gaps = 4/353 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           +  +  R  E+E R++++ S+  D    L+ E + + P+  +I +  + + +      + 
Sbjct: 1   MDKVLARRNEVESRLADAASMSPDELASLSRELSELRPVCEQIDLVKRLEGDRDAAVMLA 60

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D+E+ ++AQ E+  IE  + E  N +  LLLP+D DD ++ ILE+RAGTGG EAA
Sbjct: 61  EEAAEDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 120

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF  DLF MY+R+A    W+ EV+  S+   GGYKE  A I+G  VF+R+KFESGVHRVQ
Sbjct: 121 LFASDLFGMYQRFAGKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 180

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TEA GR+HTSAATVAVLPEA ++D+D+   D+RID  RASG GGQ VNTTDSAVRI
Sbjct: 181 RVPETEAGGRIHTSAATVAVLPEAEDVDIDVQESDLRIDVFRASGPGGQSVNTTDSAVRI 240

Query: 247 THIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V+  + KSQH+NR +AMK+LRARLYD ER R+  ER+A+RK Q+GSGDRSER
Sbjct: 241 THIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAERAASRKGQVGSGDRSER 300

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           IRTYNF QGR+TDHRINLTLYKL+ V+ G  +D+++  L+   QA+ +    E
Sbjct: 301 IRTYNFPQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQAQRLAEGGE 353


>gi|300812481|ref|ZP_07092907.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496542|gb|EFK31638.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 361

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L+ R+ EI+  M++   +     Y+++T+E A +  ++ K   +   K+E      
Sbjct: 7   QLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I D  SD E+ ++A++E   +E EI +LE+EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIAD-GSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + W V ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE++GRVHTS ATVAV+PE  ++D+D+  ++IR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESAGRVHTSTATVAVMPEYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +  ++  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D++I+ L   +Q K +   +E
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEVIDALTVYYQTKQLEELAE 359


>gi|304382675|ref|ZP_07365169.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973]
 gi|304336300|gb|EFM02542.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973]
          Length = 370

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 139/360 (38%), Positives = 223/360 (61%), Gaps = 13/360 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++R+ E+   +++   +     Y++LT+EY  +  I+     Y       Q+  
Sbjct: 9   QKLDGLESRYEEVATLITDPDVIADQERYVRLTKEYKDLEDIMDARRRYINCINAIQEAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  + +D++++++A+ E+ + E    +LE EI   L+PKD +D K+  +EIRAGTGG 
Sbjct: 69  DILN-NETDADLKEMAREELQSNETLQPQLEEEIKIALVPKDPEDAKNVQMEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY+++   + W + + S S+   GG+KEI   +SG  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFNMYKKFCDSKGWTLSITSVSEGAVGGFKEIDFAVSGTDVYGILKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ ++ RK
Sbjct: 248 VRLRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIASRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGR+TDHRI  T + L+  L G I ++I+ L  A  A+ +  
Sbjct: 308 SLVSTGDRSAKIRTYNYQQGRVTDHRIGFTTHDLQGFLAGNIQEMIDALTVAENAERMKE 367


>gi|312863805|ref|ZP_07724043.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
 gi|311101341|gb|EFQ59546.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
          Length = 359

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 231/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I + + D ++ ++A+ E+   +    E E  +  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQTQKLEELN 358


>gi|116333899|ref|YP_795426.1| peptide chain release factor 1 [Lactobacillus brevis ATCC 367]
 gi|122269414|sp|Q03QX7|RF1_LACBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116099246|gb|ABJ64395.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           brevis ATCC 367]
          Length = 361

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 233/353 (66%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  + +R+ E+   +S+   +     ++ L++E   +   + K   Y    Q+  D  
Sbjct: 6   DKLQAVADRYDELNELISDPEVIADTQRFMALSKEEGELRETVDKYHQYQDVTQQIADDD 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+++  + + E+  +  +   LE +I  LLLPKD +DDK+ I+EI    GG 
Sbjct: 66  EMLHDK-LDADMESMIKDELKELTAQKAALEEDIKVLLLPKDPNDDKNIIMEIHGAAGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DLF MY +YA  + W++EV+  +  + GG+KEIV  I+G  V+S++K+E+G H
Sbjct: 125 EASLFAADLFSMYSKYAERQGWQIEVVDENATEVGGFKEIVMMITGNKVYSKLKYENGAH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  ++D+DI  +DIR D  R+SG+GGQH+N T SA
Sbjct: 185 RVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRTDVYRSSGAGGQHINKTSSA 244

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ QNR +AM++LRAR+YD  +++  +  +A RK  +G+GDR
Sbjct: 245 VRMTHLPTGIVVAMQDERSQQQNRAKAMQILRARVYDYYKQQEESAYNAERKSAVGTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LTL KL+ ++ G +DDII+ L+ + QA  +   
Sbjct: 305 SERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDDIIDALIVSDQAAKLEDL 357


>gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 356

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 185/342 (54%), Positives = 245/342 (71%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +L+ ++ +IE  +S+       + Y KL++ ++ + PI+S    Y +   E ++   
Sbjct: 4   KLDELEQQYMQIETDLSDPEVFSNQEKYRKLSKSHSELGPIVSTYREYRRIVSEMEENRE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   D EIR+LAQ E+  +++E   LE ++   L+P D  DDK+ ILEIRAGTGG E
Sbjct: 64  LARD--RDPEIRELAQAELETLQEEKDRLEEDLKIQLVPSDPLDDKNIILEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY RYA  R WKVEVL+  +   GG KE++A+ISG+ V+SR+K+ESGVHR
Sbjct: 122 AALFAADLFRMYFRYAEERSWKVEVLNMQETGTGGIKEVIASISGKKVYSRLKYESGVHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVA+LPEA E+DV+I   D+R+D  RASG GGQ VNTTDSAV
Sbjct: 182 VQRVPETESQGRVHTSAVTVAILPEAEEVDVNIEPNDLRVDVFRASGPGGQSVNTTDSAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTG++V    EKSQH+NR +A+KVLR+RL  +  +    E   NR+ Q+GSGDRS
Sbjct: 242 RITHIPTGLVVSCQDEKSQHKNRAKALKVLRSRLLQIMEEEQKREYDDNRRAQVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           ERIRTYNF Q R+TDHRINLTLY LE V+QG++D II+PL+ 
Sbjct: 302 ERIRTYNFPQSRVTDHRINLTLYNLESVMQGHLDGIIDPLVQ 343


>gi|189345639|ref|YP_001942168.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
 gi|238692166|sp|B3EE55|RF1_CHLL2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189339786|gb|ACD89189.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
          Length = 357

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 150/353 (42%), Positives = 232/353 (65%), Gaps = 6/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +K +  ++E ++++       + + KL +EY+ +  I+     Y   +++ ++  
Sbjct: 3   DKLQSIKEKHLDLEQQLADPSAASDQNRFRKLNKEYSDLKEIVHAFDRYSLARKQLEESR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G    D ++R+L Q+E+  +++++ ELE ++  LLLPKD  D ++ I+EIRAGTGG 
Sbjct: 63  ELLG-SEKDPQMRELVQMEIEDLQEKLPELEQQLKVLLLPKDEADSRNVIMEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGRGVFSRMKFESGV 182
           EAALF  DL RMY+RYA  + WK  +L  +++   GG++E+   +SG  VF+ MK+ESGV
Sbjct: 122 EAALFAADLLRMYQRYAERQGWKCVLLDYTESSVPGGFREVTLEVSGHDVFATMKYESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAA+VAVLPEA E+DV+I  +D+R DT R+ G GGQ+VN  ++
Sbjct: 182 HRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKVET 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+     E+SQ QN+ RAM +LR +LYD++      +R+  R+  + +GD
Sbjct: 242 AVRITHLPTGIVAACQEERSQLQNKERAMTMLRTKLYDIQLAEQQQQRADLRRSMVSTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RS +IRTYN+ Q R+TDHRI  T + L  ++QG I D+I  L    Q   + +
Sbjct: 302 RSAKIRTYNYPQSRVTDHRIGFTSHALPQIMQGEIGDVIEALKLHDQTARLQA 354


>gi|294101724|ref|YP_003553582.1| peptide chain release factor 1 [Aminobacterium colombiense DSM
           12261]
 gi|293616704|gb|ADE56858.1| peptide chain release factor 1 [Aminobacterium colombiense DSM
           12261]
          Length = 358

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 167/358 (46%), Positives = 247/358 (68%), Gaps = 6/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
                ++ DL+  F ++E +MS+     ++    +L +++A I   + K   Y + K + 
Sbjct: 1   MNLESKLDDLEKTFVDLEKQMSDPVVAANLKEIQQLAKKHAQIESAVLKYREYKKVKSDL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++ H+++  H+ D ++++LA+ E+   E  +  + +E++ LLLP D +D+KS I+EIR G
Sbjct: 61  EEAHSLL--HSGDGDMQELAREEIKEKEPLLECIRDELHVLLLPVDPNDEKSVIMEIRGG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF  +L+RMY R+     W++E++ S++   GG KE++  I GRG +S++KFE
Sbjct: 119 AGGEEAALFSANLYRMYSRFCEREGWRIEIIQSNETGIGGLKEVIFKIDGRGAYSKLKFE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TEA GR+HTS +TVAVLPE  ++DVDI  ED++IDT R+SG+GGQHVN 
Sbjct: 179 SGVHRVQRVPMTEAGGRIHTSTSTVAVLPEVEDVDVDIRTEDLKIDTYRSSGAGGQHVNM 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V    E+SQ +NR +AM  LRA+LY +E+++ A E++  R+ QIG
Sbjct: 239 TDSAVRITHLPTGIVVTCQDERSQIKNRAKAMMYLRAKLYGLEKEKQAEEQAEERRGQIG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYN+ Q RITDHRI LTLYKL+  L G + ++I+ +  A Q + +    
Sbjct: 299 SGDRSERIRTYNYPQNRITDHRIGLTLYKLDQYLDGDLYEMIDAMTMADQTERLQKLG 356


>gi|254497857|ref|ZP_05110623.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
 gi|254352935|gb|EET11704.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
          Length = 351

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 242/350 (69%), Gaps = 7/350 (2%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  RF E+   +SE+  +     +  L++EYA + P+ +    Y   +     L  ++  
Sbjct: 1   MLERFQEVGRLLSEASVIADQNQFKALSKEYAQLEPVATCYETYLDAQNNLASLQEMLA- 59

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E+  +A+ E+   +K+I EL+ ++ + L+PKD DD+++  LE+RAGTGG EAA+F
Sbjct: 60  -GDDQELATMAEDELEDAQKQIDELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEAAIF 118

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            GDL+RMY RYA  + W++E++S+S  + GGYKEI+A ISG  V+S++KFESG HRVQRV
Sbjct: 119 AGDLYRMYSRYAENQGWQLELISASHGEHGGYKEIIARISGNAVYSQLKFESGAHRVQRV 178

Query: 189 PATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           P TE+ GRVHTSA TVAV+PE  E  D+ I  +D+RIDT R+SG+GGQHVN TDSA+RIT
Sbjct: 179 PDTESQGRVHTSACTVAVMPEVEEIDDIQINTDDLRIDTYRSSGAGGQHVNKTDSAIRIT 238

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG++V    E+SQH+NR +AM +L+ RL D E+ +   E++  RK  +GSGDRSERI
Sbjct: 239 HIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQAQTRKSLVGSGDRSERI 298

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RTYN+ QGR+TDHRINLT+Y+L  V++G +  ++ PL   + A+++    
Sbjct: 299 RTYNYPQGRLTDHRINLTIYQLGDVMEGNLALVVEPLKREYHAELLAELG 348


>gi|325294472|ref|YP_004280986.1| peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064920|gb|ADY72927.1| Peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 361

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 182/354 (51%), Positives = 254/354 (71%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  +  +F EIE  + +   +     +  L +E+  + PI      Y + KQ  ++  
Sbjct: 7   ERLDRIVEKFKEIEESLGKPEIIADQKKFQALAKEHKELQPIYETYMEYKKTKQGIEEAI 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I   N D E+ +LA+ E   +E+ + +LE E+  LL+PKD +D+K+ ILEIRAGTGG 
Sbjct: 67  EIIESANED-ELIELAKEEKKELEERLEQLEAELKKLLIPKDPNDEKNVILEIRAGTGGE 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  + WKVE+LS ++   GG KE++ATISG+G +SR+K+ESGVH
Sbjct: 126 EAALFAQDLFRMYTRYAEKKGWKVEILSLNETGLGGIKEVIATISGKGAYSRLKYESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GR+HTSAATVA+LPEA E+D+ I  +D++IDT R+SG+GGQHVNTTDSA
Sbjct: 186 RVQRIPVTESGGRIHTSAATVAILPEAEEVDIHIDEKDLKIDTYRSSGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V  S+E+SQ QNR++AMK+LRARL ++  ++   +  + R+ QIGSGDR
Sbjct: 246 VRITHIPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQKEQLDSARRSQIGSGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYNF + R+TDHRI LTLY LE  L G +D++I+ L  A QA+ I + +
Sbjct: 306 SEKIRTYNFPENRVTDHRIKLTLYNLEEFLDGELDEMIDALTAAEQAEKIEALA 359


>gi|116513791|ref|YP_812697.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123397|ref|YP_004033656.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|122275439|sp|Q04BB3|RF1_LACDB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116093106|gb|ABJ58259.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|312279960|gb|ADQ60679.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325125449|gb|ADY84779.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
 gi|325684404|gb|EGD26572.1| peptide chain release factor RF1 [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 361

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L+ R+ EI+  M++   +     Y+++T+E A +  ++ K   +   K+E      
Sbjct: 7   QLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I D  SD E+ ++A++E   +E EI +LE+EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIAD-GSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + W V ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE++GRVHTS ATVAV+PE  ++D+D+  ++IR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESAGRVHTSTATVAVMPEYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +  ++  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D++I+ L   +Q K +   +E
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEVIDALTVYYQTKQLEELAE 359


>gi|260911915|ref|ZP_05918480.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633938|gb|EEX52063.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 370

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 145/370 (39%), Positives = 222/370 (60%), Gaps = 17/370 (4%)

Query: 3   FLSHK----QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQK 55
            +       ++  L++R+ E+   +++   +     Y+KLT EY  +  I++    Y   
Sbjct: 1   MIEQNSILAKLDGLESRYEEVSTLITDPAVIADQERYVKLTREYKDLGDIMNARKRYVAC 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
                +   ++  + +D+E++D+A+ E+   E E  +LE EI  LL+PKD +D K+  +E
Sbjct: 61  LNSIAEAKDILA-NETDAEMKDMAREELSTNEAERPKLEEEIKLLLVPKDPEDAKNVQME 119

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           IRAGTGG EAALF GDLF MY+RY   + W + V +SS+   GG+KEI   +SG  V+  
Sbjct: 120 IRAGTGGDEAALFAGDLFGMYKRYCDSKGWNLSVTASSEGAVGGFKEIDFAVSGDNVYGI 179

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           +K+ESGVHRVQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ
Sbjct: 180 LKYESGVHRVQRVPATETQGRMHTSAATVAVLPEADKFEVNINEGDIKWDTFRSSGAGGQ 239

Query: 236 HVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           +VN  +S VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  
Sbjct: 240 NVNKVESGVRLRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYV 299

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           ++ +  RK  + +GDRS +IRTYN+ QGR+TDHRI  T + L+  + G I  +I+ L  A
Sbjct: 300 DDIANRRKSLVSTGDRSAKIRTYNYPQGRVTDHRIGYTTHDLQGFIGGDIQAMIDALSVA 359

Query: 347 HQAKMIGSAS 356
              + +  A 
Sbjct: 360 ENTERMKEAE 369


>gi|146318502|ref|YP_001198214.1| peptide chain release factor 1 [Streptococcus suis 05ZYH33]
 gi|146320693|ref|YP_001200404.1| peptide chain release factor 1 [Streptococcus suis 98HAH33]
 gi|145689308|gb|ABP89814.1| Protein chain release factor A [Streptococcus suis 05ZYH33]
 gi|145691499|gb|ABP92004.1| Protein chain release factor A [Streptococcus suis 98HAH33]
 gi|292558283|gb|ADE31284.1| Peptide chain release factor 1 [Streptococcus suis GZ1]
          Length = 364

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 152/359 (42%), Positives = 233/359 (64%), Gaps = 4/359 (1%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQE 58
           +   + Q+  +++R+ E+   +S+   V     +++L++E A     ++    Y    Q 
Sbjct: 5   LMNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQN 64

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             D   +I + + D+++ ++A+ E+   + +    E ++  LLLPKD +DDK+ ILEIR 
Sbjct: 65  IVDAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRG 124

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+
Sbjct: 125 AAGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKY 184

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVP TE+ GRVHTS ATV ++PE  E++ DI  +D+R+D   ASG+GGQ+VN
Sbjct: 185 ESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVN 244

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
              +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  I
Sbjct: 245 KVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTI 304

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 305 GTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEELN 363


>gi|325479514|gb|EGC82610.1| peptide chain release factor 1 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 358

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 162/355 (45%), Positives = 229/355 (64%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLH 63
           + I  +K  + ++E +M +   +    KLT+   EY ++ PI+ K     + +   ++  
Sbjct: 3   ENIEHIKENYKDLEKKMIDPEVLSDIAKLTKITREYNSLKPIVEKYDQIKEAEDTIEENK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I +   D ++ ++ + E+   EK + E   E+  LL+PKD +D +  I+EIR G GG 
Sbjct: 63  ELINEA-DDQDMVEMLKEEIKENEKLLDEYNEEMKILLIPKDPNDSRDVIIEIRPGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF GDL+RMY  YA    +K E +  S    GG K+    I G G +SR K+ESGVH
Sbjct: 122 EAGLFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKDATFMIRGEGAYSRFKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAVLPE  E+DV +   DIR D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVLPEVDELDVHVDPNDIRTDVFRSSGNGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V+   EKSQ +N+ +AM++L AR+Y++E ++   E + NRK Q+G+GDR
Sbjct: 242 VRLTHIPTGIVVSMQDEKSQIKNKEKAMRILLARIYELEEEKRNKEIADNRKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF QGRITDHRIN T+Y+L+  L G I ++I+ L+   Q + +    E
Sbjct: 302 SERIRTYNFPQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIEEDQTRKLEKVGE 356


>gi|94986447|ref|YP_594380.1| peptide chain release factor 1 [Lawsonia intracellularis
           PHE/MN1-00]
 gi|119361555|sp|Q1MSG7|RF1_LAWIP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94730696|emb|CAJ54058.1| Protein chain release factor A [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 359

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 179/350 (51%), Positives = 250/350 (71%), Gaps = 6/350 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +L+ +F EIE  +++    +    Y KLT+ ++ + PI++    + + +Q+  +   
Sbjct: 4   KLENLEQKFIEIECSLAQPNIFNDQEQYRKLTKTHSDLKPIVTTFQQFKKLQQQLSENKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I D   D +I+++A  E+  +E E+  LE E+  LLLPKD  D+K+ +LEIRAGTGG E
Sbjct: 64  LISDI--DPDIQEMALEEIKKLELELTHLEYELKILLLPKDPLDEKNILLEIRAGTGGEE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  DLFRMY RYA    WKVE++S SD+D GG+KEI+A I G  V+SR+KFESG HR
Sbjct: 122 AALFAADLFRMYCRYAEKMHWKVEIMSQSDSDTGGFKEIIALIQGDNVYSRLKFESGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GR+HTSAATVAVLPEA ++D++I  E++R D  R+SG GGQ VNTTDSAV
Sbjct: 182 VQRVPTTESQGRIHTSAATVAVLPEAEDVDIEIRPEELRFDVFRSSGPGGQSVNTTDSAV 241

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V    EKSQH+N+ +A+KVL +RL  +++++   E++  R+  +GSGDRS
Sbjct: 242 RVTHIPTGIVVTCQDEKSQHKNKAKALKVLSSRLLQIKQEQQEIEQADARRALVGSGDRS 301

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           ERIRTYNF QGR+TDHRINLTLY L  V++G I + I+ L T  Q + + 
Sbjct: 302 ERIRTYNFPQGRVTDHRINLTLYSLIKVMEGEIQEFIDALSTHAQTEALK 351


>gi|50914205|ref|YP_060177.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10394]
 gi|61214586|sp|Q5XC69|RF1_STRP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50903279|gb|AAT86994.1| Bacterial Peptide Chain Release Factor 1 [Streptococcus pyogenes
           MGAS10394]
          Length = 359

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 160/358 (44%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G ++++I+ L+   Q K + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMNEVIDALVMYDQTKKLESLN 358


>gi|312884085|ref|ZP_07743798.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368255|gb|EFP95794.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 362

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 166/362 (45%), Positives = 241/362 (66%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      + Q ++
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPEIIGDQDKFRSLSKEYSQLEEVTKCFQAFQQAQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +             D E+R++AQ E+   ++ I  L  E+  LLLPKD +DD++C LEIR
Sbjct: 61  DL--TAAEEMAKEEDEEMREMAQEEIAQSKQAIENLSEELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY ++A  + W++EV+SS++ + GGYKE++A +SG G +  MK
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKFAEKKGWRIEVMSSNEAEHGGYKEMIAKVSGEGAYGIMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA++ E  E +  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRS+RIRTYN+ QGR++DHRINLTLY+L  V++G +  +I+P+L  HQA  + + 
Sbjct: 299 LLGSGDRSDRIRTYNYPQGRVSDHRINLTLYRLNEVMEGDVSSLIDPVLQEHQADQLAAL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|299769517|ref|YP_003731543.1| peptide chain release factor 1 [Acinetobacter sp. DR1]
 gi|298699605|gb|ADI90170.1| peptide chain release factor 1 [Acinetobacter sp. DR1]
          Length = 362

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 244/362 (67%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   +++   +     + KL+ E++ +S I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+ A +  + ELE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEMM----KSDPDFKDMAEEEIQANKDLLVELESQLNILMIPKDPNDSNAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GG+KE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   + +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|282879521|ref|ZP_06288252.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1]
 gi|281306469|gb|EFA98498.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1]
          Length = 370

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 142/361 (39%), Positives = 219/361 (60%), Gaps = 13/361 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ RF E+   +++   +     Y+KLT+EY  +  I+     Y       ++   
Sbjct: 10  KLEGLEARFEEVSTLITDPDVIADQPRYVKLTKEYKDLGDIMDIRKRYIACLNAIRESKD 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++  + +D++++++A+ E+ A E    +LE EI   L+PKD +D K+  +EIRAGTGG E
Sbjct: 70  ILA-NETDADMKEMAREELQANEDMQPQLEEEIKLALVPKDPEDAKNVQMEIRAGTGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLF MY+ Y   + W + V S ++   GGYKEI   +SG  V+  +K+ESGVHR
Sbjct: 129 AALFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAVSGDNVYGTLKYESGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S V
Sbjct: 189 VQRVPATETQGRMHTSAATVAVLPEADQFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ +  RK 
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYIDDIANRRKS 308

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS +IRTYN+ QGR+TDHRI  T + L+  + G I  +I+ L  A  A+ +  +
Sbjct: 309 LVSTGDRSAKIRTYNYPQGRVTDHRIGYTTHDLQGFIGGDIQGVIDALTVAENAEKLKDS 368

Query: 356 S 356
            
Sbjct: 369 E 369


>gi|116618873|ref|YP_819244.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122270927|sp|Q03VA1|RF1_LEUMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116097720|gb|ABJ62871.1| bacterial peptide chain release factor 1 (bRF-1) [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 356

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 147/359 (40%), Positives = 227/359 (63%), Gaps = 9/359 (2%)

Query: 3   FLSHKQ-ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQE 58
                Q +  + + + E+  ++++   ++    Y+KL++E   I   +   + Y Q  Q+
Sbjct: 1   MDPIFQSLQTVIDHYDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQD 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            QD   ++G    D+E+  LA+ ++ A++ E  +LE ++  L+LPKD +DDK+ I+EIR 
Sbjct: 61  IQDAEELLG----DAEMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRG 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E++LF  DL  MY RYA  + W + ++  S  + GGYKE+   I+G  V+S++KF
Sbjct: 117 AAGGDESSLFAADLLDMYRRYAERQNWSMSIIDESTTEVGGYKEVAVMITGDNVYSKLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVPATE  GRVHTS ATV V+PE  EID ++   D+  +  R+ G+GGQ+VN
Sbjct: 177 ESGAHRVQRVPATETQGRVHTSTATVGVMPEFEEIDFELNESDLEEEFFRSGGAGGQNVN 236

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
              +AVR+ H PTGIMV    E++Q +NR +A K+L +R+YD   ++  +E +A RK  +
Sbjct: 237 KVSTAVRLIHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESEYAAQRKSAV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+GDRSERIRTYN+ Q R+TDHRI LTL KL+ ++ G + ++I+ L+ A Q   +   +
Sbjct: 297 GTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQTAKLAELN 355


>gi|104773785|ref|YP_618765.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|119361552|sp|Q1GAX5|RF1_LACDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|103422866|emb|CAI97528.1| Peptide chain release factor 1 (RF-1) [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
          Length = 361

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 241/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L+ R+ EI+  M++   +     Y+++T+E A +  ++ K   +   K+E      
Sbjct: 7   QLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I D  SD E+ ++A++E   +E EI +LE+EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIAD-GSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + W V ++ S   + GGYK     I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRAAIMITGNKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE++GRVHTS ATVAV+PE  ++D+D+  ++IR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESAGRVHTSTATVAVMPEYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +  ++  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D++I+ L   +Q K +   +E
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEVIDALTVYYQTKQLEELAE 359


>gi|66769665|ref|YP_244427.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|81304380|sp|Q4URB6|RF1_XANC8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|66574997|gb|AAY50407.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 361

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 170/363 (46%), Positives = 247/363 (68%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+LA +  + EL+ ++  LL+P+D  D+ +  LE+R
Sbjct: 61  DLSAAEAM----RNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +++  +    D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L + ER + A  ++  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSKAAAAKAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQADELAR 356

Query: 355 ASE 357
            SE
Sbjct: 357 LSE 359


>gi|90422036|ref|YP_530406.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB18]
 gi|119361591|sp|Q21BZ9|RF1_RHOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90104050|gb|ABD86087.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB18]
          Length = 361

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 190/358 (53%), Positives = 255/358 (71%), Gaps = 2/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  L   ++  L    A +E ++      D Y+KL  E A ++P+I  +  Y Q   E  
Sbjct: 1   MSLLPETKLDVLLAHHASLENQLQSQVGADTYVKLMRELAELNPLIEAVKAYRQVGAERG 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           ++  ++ D  +D+E+R +A+ E  A+E +  EL  +I   LLPKD  DD++ +LEIRAGT
Sbjct: 61  EIDALLADAATDAEMRAMAEAEHAALEAQEAELAQQIRVALLPKDAMDDRNVMLEIRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LF GDLFRMYE++A L+ W VEV+S+S+   GGYKEI+A + GRG F+++KFES
Sbjct: 121 GGDEASLFAGDLFRMYEKFAVLQGWSVEVVSASEGTMGGYKEIIAEVKGRGAFAKLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAATVAVLPE  E+DVDI  +D+RI+TMRA G+GGQHVN T
Sbjct: 181 GVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKPDDLRIETMRAQGAGGQHVNKT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SA+RITHIPTG+ V     +SQH+NR  AM +LR+R+YD E++R+ + RSA RK ++GS
Sbjct: 241 ESAIRITHIPTGLQVMMQDSRSQHKNRASAMNILRSRIYDAEQQRIDSVRSAERKEKVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTLYKL  V+ G  + ++I+ L T HQA  + +  
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQAAQLAAQG 358


>gi|291288202|ref|YP_003505018.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885362|gb|ADD69062.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 356

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 244/354 (68%), Gaps = 6/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ +++ ++ E+  ++ +   +     + K  +E+A + P++ +   Y  +K+   + H
Sbjct: 3   DKLDEVRKKYYELTDKLVDPELMKDNMAFQKTAKEHAELKPVVERYEEYLAEKEAVDEAH 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++I   + D ++ +LA++E+   +  + ELE+E+   LL KD  DDK+  LEIRAGTGG 
Sbjct: 63  SIIK-TSDDKDLVELAEMELEEKKGVLDELEDELKKSLLTKDPYDDKNIFLEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF GDL +MY +YA +  WKVEV+  ++   GGYKE+VA + G G +S++KFE+G H
Sbjct: 122 EASLFAGDLLKMYTKYAEMNGWKVEVVDFNETGVGGYKEVVALVKGHGAYSKLKFEAGGH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTSA TVAVLPEA ++DV I  +D+RID  RASG+GGQHVNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSACTVAVLPEAEDVDVHIEQKDLRIDVFRASGAGGQHVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTG++V    E+SQ +NR +AMK+L++++ + E ++  +  +A+RKLQ+GSGDR
Sbjct: 242 VRMTHIPTGVVVSCQDERSQIKNREKAMKLLKSKILEAEIQKKQSAEAASRKLQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI      L+  L G ++D+I+  +   QA+ +  + 
Sbjct: 302 SERIRTYNFPQNRVTDHRIK-ESANLDRFLLGEMEDMIDATIAFDQAERLQESG 354


>gi|172058704|ref|YP_001815164.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15]
 gi|229576657|sp|B1YEH9|RF1_EXIS2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171991225|gb|ACB62147.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15]
          Length = 352

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 162/356 (45%), Positives = 249/356 (69%), Gaps = 8/356 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L++R+ ++   +++   +       ++++E + ++P +    +Y  K +  Q+
Sbjct: 1   MLDRLSALEDRYEKLNDLLADPAIIKDTNQLREVSKEQSQLAPTVEVYRVYRDKMEAYQE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    +D E+RDLA+ EV  +E EI++LE ++  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  ARHML----TDPEMRDLAKEEVAVLEPEIKDLETKLKALLLPKDPNDDKNVIVEIRGAAG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDLF+MY ++A  + WK+E++ +S  + GGYKEI+  + G G +S++K+E+G
Sbjct: 117 GDEAALFAGDLFKMYSKFAEKQNWKIEIIDASYTELGGYKEIIFIVKGSGAYSKLKYENG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP+TE+ GR+HTS ATVAVLPEA +++V+I  +D+R+DT  +SG GGQ VNTT 
Sbjct: 177 AHRVQRVPSTESGGRIHTSTATVAVLPEAEDVEVEIHDKDVRVDTFTSSGPGGQSVNTTQ 236

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+     EKSQ +N+ +AMKVLRAR+YD  ++    E    RK  +G+G
Sbjct: 237 SAVRVTHVPTGIVASCQDEKSQIKNKEKAMKVLRARVYDKIQREQQAEYDEKRKSAVGTG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF+Q R+TDHRI LT+ KL+ +LQG +D++I+ L+  +QA+   +A+
Sbjct: 297 DRSERIRTYNFAQNRVTDHRIGLTIQKLDRILQGEMDEVIDTLVMEYQARASEAAN 352


>gi|212550858|ref|YP_002309175.1| peptide chain release factor 1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549096|dbj|BAG83764.1| peptide chain release factor 1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 359

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 230/354 (64%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L  RF EI   +S       +  ++KL +EY  +  I      Y Q      D  
Sbjct: 6   EKLDILIIRFEEIGKLISNPDSITDMKRFVKLNKEYRELEKISLIRDQYKQTLINIIDAQ 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           T++ +  SD  +R++A+ E+      + +LE +I  LL+P D  D K+ I+EIR+GTGG 
Sbjct: 66  TIL-EKESDKILREIAKEELEESTSLLNQLEKKIKLLLIPIDPQDGKNAIVEIRSGTGGD 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF GDL++MY +Y   + WK+ V SSS+   GG+KEI+ T++G  V+S +K+ESGVH
Sbjct: 125 EASLFAGDLYKMYSKYCESKGWKIAVTSSSEGTIGGFKEIIFTVNGENVYSTLKYESGVH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTSAATVAV PEA ++D++I   DIR DT  +SG GGQ VNTT SA
Sbjct: 185 RVQRVPITETQGRIHTSAATVAVFPEAKDVDIEIKESDIRTDTFCSSGPGGQSVNTTYSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +R+THIPTGI+V    E+SQ +N+ +AM  LR+R+Y++E ++  +E +  RK  + +GDR
Sbjct: 245 IRLTHIPTGIVVQCQDERSQLKNKEKAMTELRSRIYNIEYQKQIDETALKRKTMVSTGDR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           S +IRTYN+ QGR+TDHRIN T Y L   L+G I + IN L+ A  ++ +  + 
Sbjct: 305 SAKIRTYNYPQGRVTDHRINYTTYNLLTFLEGNIQEFINQLIIAENSEKLKDSE 358


>gi|160878572|ref|YP_001557540.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg]
 gi|189039966|sp|A9KHD4|RF1_CLOPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160427238|gb|ABX40801.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg]
          Length = 358

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 162/355 (45%), Positives = 246/355 (69%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ DL  RF EI+  ++E    +    + KL +E   +  I+ K   Y Q K+  ++  
Sbjct: 3   DKLEDLLIRFQEIQNELNEPTVTNDQARFRKLMKEQNDLGEIVDKYLEYKQTKKNIEE-S 61

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + D  SD E+R+LA+ E+   +  +  +E ++  LLLPKD +D K+ I+EIR G GG 
Sbjct: 62  LELLDEESDEEMRELAKEELSTSKANLVVIEEQLKILLLPKDPNDSKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +LFRMY +YA   +WK+++++ ++N  GG+KE++  I+G+G +S++K+ESGVH
Sbjct: 122 EAALFAAELFRMYSKYAETMRWKIDMMNLNENGIGGFKEVIFMINGQGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+ GR+HTS  TVA++PEA E+DV++ + D R D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRIPVTESGGRIHTSTVTVAIMPEAEEVDVELNMNDCRFDVFRSSGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI++    EKSQ +NR +A+KVLRARLY++E ++  +  +A RK Q+G+GDR
Sbjct: 242 VRLTHMPTGIVISCQDEKSQLKNRDKALKVLRARLYELELEKAHDAEAAARKSQVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR TDHRI LT ++L+ ++ G + ++I+ L  A QA  + +  +
Sbjct: 302 SEKIRTYNFPQGRCTDHRIKLTSHRLDDIMNGDLQEVIDSLTAADQAAKLSNMQD 356


>gi|315125019|ref|YP_004067023.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018741|gb|ADT66834.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 355

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K   Y +     ++   
Sbjct: 5   KLDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAGTGG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|270291033|ref|ZP_06197256.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
 gi|304385309|ref|ZP_07367654.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
           20284]
 gi|270280429|gb|EFA26264.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
 gi|304328516|gb|EFL95737.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
           20284]
          Length = 359

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 154/357 (43%), Positives = 229/357 (64%), Gaps = 5/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
                ++  + +R+ E+   +++   +     Y +L++E   I   + K   Y +     
Sbjct: 1   MDIMDKVQAVADRYDELSELLADPEVLADSQRYQELSKEEGEIRETVEKYREYRKVVDSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   +      D E+  L + E+  +  +  +LE EI  L+LPKD +DDK+ I+EI   
Sbjct: 61  AENEEL-QREKLDPEMDSLVKAELADLRDQKEKLEEEIKVLMLPKDPNDDKNIIMEIHGA 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA+LF  DL+ MY RYA  + WKV+++  +  D GG+KEIV  ISG  V+S++K+E
Sbjct: 120 AGGDEASLFAADLYNMYTRYAESQGWKVQIVDENATDVGGFKEIVLMISGDKVYSKLKYE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           +G HRVQRVP TE++GRVHTS ATV V+PEA ++D++I  +DIR D  R+SG+GGQH+N 
Sbjct: 180 NGAHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDIEIDPKDIRTDVYRSSGAGGQHINK 239

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH+PTGI+V    E+SQ QNR +AM++L+AR+YD  + +  +  +  RK  +G
Sbjct: 240 TSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKARVYDYYQSQEEDAYNEERKNAVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ V+ G +++II  L+   QAK + + 
Sbjct: 300 TGDRSERIRTYNFPQNRVTDHRIGLTLNKLDRVMNGELNEIIEALILDDQAKKMEAL 356


>gi|319788960|ref|YP_004090275.1| peptide chain release factor 1 [Ruminococcus albus 7]
 gi|315450827|gb|ADU24389.1| peptide chain release factor 1 [Ruminococcus albus 7]
          Length = 359

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 165/356 (46%), Positives = 250/356 (70%), Gaps = 5/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L+++F EI  R+ +   V+    Y +L  EY  + P++  +  YD+ K E  +  
Sbjct: 3   EKLRALEDKFNEINERLMQPEVVNDSKLYTELMIEYKNLEPVVEALREYDKAKAEFDEAV 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D + D++++D+ Q +    +  +  LE E+  LLLPKD +DD++ I+EIR G GG 
Sbjct: 63  EMSSDSSLDADMKDMVQEQYAESKAAMARLEEELKILLLPKDPNDDRNVIIEIRGGAGGE 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF   L+RMY  YAA + W++EV+S+++ + GGYKEI  T+SG+G +SR+K+ESGVH
Sbjct: 123 EAALFANSLYRMYSMYAAQKNWQIEVMSANETELGGYKEITFTVSGQGAYSRLKYESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TE+ GRVHTS  TVAVLPE  +++++I  E +I+++  R+SG+GGQH+N T S
Sbjct: 183 RVQRVPETESQGRVHTSTVTVAVLPEVDDVELEINEEKEIKMEVFRSSGAGGQHINKTSS 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+ HIPTG +V   +E+SQ QNR +A+K+L+A+L D + +   +E ++NR+ Q+G+GD
Sbjct: 243 AVRLIHIPTGTVVECQNERSQFQNREKALKMLKAKLLDEKVRAQEDEIASNRRSQVGTGD 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSE+IRTYNF + RI+DHRI LTLYKLE +L G +D++I+ L TA QA  + +  E
Sbjct: 303 RSEKIRTYNFPESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQAAKLAAQEE 358


>gi|86152633|ref|ZP_01070838.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843518|gb|EAQ60728.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 355

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 244/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K+  Y +     ++   
Sbjct: 5   KLDPFLRRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKVKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAGTGG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|114797902|ref|YP_759355.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444]
 gi|119361550|sp|Q0C4I8|RF1_HYPNA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114738076|gb|ABI76201.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444]
          Length = 352

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 246/350 (70%), Gaps = 3/350 (0%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           ++  + +R+ E+E RM  + + +  I L++E+A + P++ K       ++   +   +I 
Sbjct: 2   RLQQVIDRYEEVEARMGATSNTNEIIALSKEHAELRPVVEKARALMTVRKGLSEAEAMIA 61

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D E+ +LA++E+  + + +  LE E+  LLLPKD DD    +LE+RAGTGG EAAL
Sbjct: 62  --SGDREMAELAEMEIDDLRERLPGLEQEMQLLLLPKDVDDKADIVLEVRAGTGGDEAAL 119

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F GDLFRMY R+A +  W VE++  +  D GGYKEI+A +SG GVF RMK+ESGVHRVQR
Sbjct: 120 FAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANVSGDGVFGRMKWESGVHRVQR 179

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           VPATE  GR+HTSAATVAVLP    I++++  +DIRIDTMR+SG+GGQHVNTTDSAVRIT
Sbjct: 180 VPATETQGRIHTSAATVAVLPAPENIEIEVRADDIRIDTMRSSGAGGQHVNTTDSAVRIT 239

Query: 248 HIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           H+PTGIMVTSSEKSQH NR +AM  L+ RLY+ ER      RS  R  QIGSGDRS+++R
Sbjct: 240 HLPTGIMVTSSEKSQHVNREKAMDQLKIRLYERERAEKDAARSEARASQIGSGDRSQKVR 299

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           TYN+ + R+TDHRI LTLY L+ ++ G  + D+I  L+T  Q++ + S  
Sbjct: 300 TYNYPENRLTDHRIGLTLYSLDRIITGDKLGDVIEALITEDQSRRLASLE 349


>gi|254302818|ref|ZP_04970176.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323010|gb|EDK88260.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 357

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 168/356 (47%), Positives = 243/356 (68%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 3   DKLEEVVTRYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   DSE++++   E+   E+++ +LE E+  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 63  ESFK-TEKDSEMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  +KWK+E++   D + GG KEI  TI G G +SR+KFESGVH
Sbjct: 122 EAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +  +V +  +D++IDT R+ G+GGQHVN TDS
Sbjct: 182 RVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 242 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ E
Sbjct: 302 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEE 357


>gi|258648524|ref|ZP_05735993.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259]
 gi|260851292|gb|EEX71161.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259]
          Length = 371

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 153/362 (42%), Positives = 230/362 (63%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  L++RF E+   +++   +     Y++LT+EY  +  ++     Y +     Q+  
Sbjct: 10  EKLDGLRSRFEEVSTLITDPSVIADQTRYVRLTKEYKELEDLMQARKRYAELLSNLQESK 69

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    +D+E+++LA+ EV A E EI   E +I  +L+PKD +D K+ ILEIRAGTGG 
Sbjct: 70  NLL-LTETDAELKELAREEVAACEAEIPTCEEQIKLMLVPKDPEDGKNAILEIRAGTGGD 128

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY ++   + WK EV S+++   GG+KE+VA+++G  V+  +K+ESGVH
Sbjct: 129 EAALFAGDLFRMYAKFCESKGWKFEVSSANEGAVGGFKEVVASVTGADVYGTLKYESGVH 188

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAATVAVLPEA   DV+I   +IR +T R+SG+GGQ+VN  +S 
Sbjct: 189 RVQRVPATETQGRVHTSAATVAVLPEAEAFDVEIHEGEIRWETFRSSGAGGQNVNKVESG 248

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ +  RK
Sbjct: 249 VRLRYDWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYVDDIANRRK 308

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D I+ L+ A  A+ +  
Sbjct: 309 TLVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLPAFVDGDIQDCIDQLMVAENAERMKE 368

Query: 355 AS 356
           A 
Sbjct: 369 AE 370


>gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217]
 gi|119361603|sp|Q12QR8|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           denitrificans OS217]
          Length = 361

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 157/355 (44%), Positives = 240/355 (67%), Gaps = 7/355 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E+   + ++  +     +  L++EY+ +  ++     + Q + +      
Sbjct: 8   KLEGLLERNEEVLAMLGDATVISDQERFRALSKEYSQLEDVVKSFKAFQQAQLDLASAKE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D+E+R++AQ E+ A +K I +LE+E+  LLLPKD +DD +  LEIRAG GG E
Sbjct: 68  MLQE--DDAEMREMAQEEMKAAKKVIEQLEDELQILLLPKDPNDDTNAFLEIRAGAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA+F GDLFRMY R+    KW+VEV++ ++ D GG+KEI+  +SG GV+ ++K+ESG HR
Sbjct: 126 AAIFAGDLFRMYSRFCEANKWQVEVMNVNEADLGGFKEIIVKVSGEGVYGKLKYESGGHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GRVHTSA TV VL E  E +       D+++DT RASG+GGQHVN TDSA
Sbjct: 186 VQRVPETESQGRVHTSACTVVVLHEVPEAEAISINPADLKVDTFRASGAGGQHVNKTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIP+GI+V    ++SQH+NR +AM VL AR+  +E ++  +     R+  + SGDR
Sbjct: 246 IRITHIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAIEDEKRRSAEETTRRSLVASGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYN+ QGR++DHRINLTLY+L  +++G ++ ++ P++  HQA ++ + ++
Sbjct: 306 SERIRTYNYPQGRVSDHRINLTLYRLNEIMEGDLNALLEPIMLEHQADLLAALAD 360


>gi|218960517|ref|YP_001740292.1| peptide chain release factor RF-1 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729174|emb|CAO80085.1| peptide chain release factor RF-1 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 355

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 236/353 (66%), Gaps = 5/353 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEE 59
            L  +++  L+N   E++ ++S+   ++   K       +  +  I +    Y   K+  
Sbjct: 1   MLPQEKLQILENELKEMQEQISDPAVINDAQKYRDCLRRFKELREINAAWKHYQTLKKHI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++++ +     +D E+ DL + E  ++++++ + E ++  LL+P D +D K+ I+EIRAG
Sbjct: 61  EEVNAL-EKTENDPEMLDLIKDEERSLQQQLEQTELKLKDLLIPADPNDAKNAIVEIRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  DLFRMY  YA ++ WK+EV+S +  + GGYKEI+  +SG+ V+S M+FE
Sbjct: 120 TGGEEAALFAADLFRMYSYYAEMKGWKLEVISMNQTELGGYKEIIFQLSGKDVYSYMRFE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQR+P TE+SGR+HTSA TVAVLPEA +ID+DI   D+RID  R++G GGQ VNT
Sbjct: 180 SGVHRVQRIPVTESSGRIHTSAVTVAVLPEAEDIDIDIQESDLRIDVYRSTGHGGQSVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V    EKSQ +N+ +A+KVLR+RL D E  R   E +  RK Q+ 
Sbjct: 240 TDSAVRITHLPTGIVVTCQDEKSQIKNKAKALKVLRSRLLDEEISRQEQEIAKARKAQVS 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +GDRS +IRTYNF Q R+TDHRINLT Y L+  L G I++ I  L  A + + 
Sbjct: 300 TGDRSAKIRTYNFPQSRVTDHRINLTSYNLDSFLAGNIEEFIQALRLAWRNEK 352


>gi|57238625|ref|YP_179756.1| peptide chain release factor 1 [Campylobacter jejuni RM1221]
 gi|73621534|sp|Q5HSH9|RF1_CAMJR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57167429|gb|AAW36208.1| peptide chain release factor 1 [Campylobacter jejuni RM1221]
 gi|315059063|gb|ADT73392.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 355

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 173/354 (48%), Positives = 242/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K   Y +     ++   
Sbjct: 5   KLDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAG GG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|320538185|ref|ZP_08038080.1| peptide chain release factor 1 [Treponema phagedenis F0421]
 gi|320145002|gb|EFW36723.1| peptide chain release factor 1 [Treponema phagedenis F0421]
          Length = 371

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 173/357 (48%), Positives = 257/357 (71%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++ +L+N++ ++EL + +   V     Y  +  ++  +S ++ +   Y Q +++ Q
Sbjct: 15  MMKDRLENLRNQWKQVELEVQDPDLVKNVARYKDVMRQHGYLSKLMDEYDFYLQTEKQLQ 74

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + H ++ +  SD E++++A+ E+ A+EK++ + E ++  LL+P D  ++K+ I+EIR GT
Sbjct: 75  EAHALMQEE-SDHELKEMAREEMHALEKQLEQSEADLKMLLIPPDPMEEKNIIMEIRGGT 133

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLF+MY  YA  + W  E++ +++ + GG+KEIV +ISG+ V+  +++ES
Sbjct: 134 GGDEAALFAADLFKMYTHYAESKNWTYEIMDANETELGGFKEIVFSISGKYVYGSLRYES 193

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE SGR+HTSA TVAVLPEA E ++ I  ED+R+D MRA G GGQ VNTT
Sbjct: 194 GVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIVIKPEDLRVDVMRAGGPGGQSVNTT 253

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+THIPTG++V    EKSQ +N+ +A++VLR+RLYD+E  +   ER+ NRK Q+GS
Sbjct: 254 DSAVRLTHIPTGMVVICQDEKSQIKNKAKALRVLRSRLYDLEESKKNQERAQNRKSQVGS 313

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF Q R+TDHRINLTLY+L+ VLQG +D+II PL  A + +M+  A+
Sbjct: 314 GDRSERIRTYNFPQNRVTDHRINLTLYQLDAVLQGDLDEIIEPLCIAAREEMLNEAN 370


>gi|253751628|ref|YP_003024769.1| peptide chain release factor 1 [Streptococcus suis SC84]
 gi|253753530|ref|YP_003026671.1| peptide chain release factor 1 [Streptococcus suis P1/7]
 gi|253755645|ref|YP_003028785.1| peptide chain release factor 1 [Streptococcus suis BM407]
 gi|251815917|emb|CAZ51531.1| peptide chain release factor 1 [Streptococcus suis SC84]
 gi|251818109|emb|CAZ55903.1| peptide chain release factor 1 [Streptococcus suis BM407]
 gi|251819776|emb|CAR45680.1| peptide chain release factor 1 [Streptococcus suis P1/7]
 gi|319758066|gb|ADV70008.1| peptide chain release factor 1 [Streptococcus suis JS14]
          Length = 359

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 152/358 (42%), Positives = 232/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A     ++    Y    Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I + + D+++ ++A+ E+   + +    E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV ++PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEELN 358


>gi|308071169|ref|YP_003872774.1| peptide chain release factor 1 [Paenibacillus polymyxa E681]
 gi|305860448|gb|ADM72236.1| Peptide chain release factor 1 (RF-1) [Paenibacillus polymyxa E681]
          Length = 355

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 241/354 (68%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +    +   KL   ++E + + P     + Y    +E + 
Sbjct: 1   MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKNVVEELEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             T+ G+   D E+R++ ++E+  +    REL+ +I  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKTMQGEKLDD-EMREMVKMEIEELSVRKRELDEKIRILLLPKDPNDDKNVIIEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY RYA  + W+VE++ ++ ND GG+KE++  I+GRG +S+MKFESG
Sbjct: 120 GDEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+P TE+ GR+HTS +TV+V+PEA E+D++I  +DIR+DT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPTTESGGRIHTSTSTVSVMPEAEEVDIEISDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGIM      KSQ+ N+ +A++VLRAR+ D+ R+    + +  RK ++G+G
Sbjct: 240 SAVRVTHMPTGIMATCQDGKSQNSNKEKALQVLRARISDMLRQEEEAKYAGERKSKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF Q R+TDHRI LT++KL+ V+ G I++I++ L  A QA ++  
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQADLMEQ 353


>gi|170742857|ref|YP_001771512.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
 gi|226739116|sp|B0UAV4|RF1_METS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168197131|gb|ACA19078.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
          Length = 359

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 184/359 (51%), Positives = 250/359 (69%), Gaps = 5/359 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M+ +   ++  +  R   +   +S      +++++L+ E + +  +++ I  Y   + E 
Sbjct: 1   MIAIPSDRLDAILARHDIVTATLSAGEADSESFVQLSRELSDLDDVVAAIRAYRAAEAEL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + +  ++ +   D E+R LA  E   +E         +  +LLPKD  D+KS ILEIRAG
Sbjct: 61  RGVEAMLQE--GDPEMRALAAEEKPEVEAARDAAAKALQIMLLPKDAADEKSAILEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDL RMY RYA L+ WK+EV+S S    GGY+E+VA + GRGVF+R+KFE
Sbjct: 119 TGGDEAALFAGDLLRMYARYADLKGWKIEVVSESPGTMGGYREVVAEVKGRGVFARLKFE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE  GR+HTSAATVAVLPEA E+D+ +   D++IDTMRA G+GGQHVN 
Sbjct: 179 SGAHRVQRVPETETQGRIHTSAATVAVLPEAEEVDIHVNEADLKIDTMRAQGAGGQHVNK 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA+RITHIP+GI+V    E+SQH+NR RAM VLRARLY+ ER +    R+A+R+ Q+G
Sbjct: 239 TESAIRITHIPSGIVVFVQEERSQHKNRARAMAVLRARLYEQERSQKDAARAADRRAQVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHRINLTLYKLE VL G  +D++++ L+T HQA ++ +  
Sbjct: 299 SGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVLAGTALDELVDALVTEHQAALLAAEG 357


>gi|319936941|ref|ZP_08011351.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
 gi|319807877|gb|EFW04456.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
          Length = 358

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 145/357 (40%), Positives = 234/357 (65%), Gaps = 6/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +  R+ E+   + +      +    + ++E A++         Y +     ++
Sbjct: 4   MIEKLETIARRYEELNEILMDPSIASDIHKMTEASKEQASLETAYQLYQEYKKVLSGIEE 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D EI+++A++E+  +E++   LE +++  L+PKD +D+K+ I+E+R   G
Sbjct: 64  AKELMKE--NDPEIKEMAELELSELEEKKPHLEEKLHLELIPKDPNDNKNVIVEVRGAAG 121

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E  +F GDL+RMY +YA  + WKVEV+ + +++ GG+  +   + G GV+S++KFESG
Sbjct: 122 GDEGNIFAGDLYRMYVKYAESQGWKVEVMETQESEAGGFSLVSFMVKGEGVYSKLKFESG 181

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE  GRVHTS ATV V+PEA E+DV+I   D+RIDT RASG+GGQH+N TD
Sbjct: 182 SHRVQRVPKTETQGRVHTSTATVLVMPEAEEVDVEINPGDLRIDTYRASGAGGQHINKTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+  +   +SQH N+ +AM+ LRAR+Y++ ++       + R+ +IGSG
Sbjct: 242 SAVRITHLPTGIVASSQDGRSQHDNKDKAMRALRARVYEMVQREQEEALGSERRSKIGSG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRSE+IRTYN+ Q R+TDHRI LT+ +L+ +++G +DD+I+ L+   Q   +    E
Sbjct: 302 DRSEKIRTYNYPQNRVTDHRIGLTIQQLDRIMEGKLDDVIDALINEDQRLKLLGEEE 358


>gi|21230341|ref|NP_636258.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|188992877|ref|YP_001904887.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|24418637|sp|Q8PC68|RF1_XANCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576663|sp|B0RUA5|RF1_XANCB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21111894|gb|AAM40182.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|167734637|emb|CAP52847.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris]
          Length = 361

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 170/363 (46%), Positives = 246/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+LA +  + EL+ ++  LL+P+D  D+ +  LE+R
Sbjct: 61  DLSAAEAM----RNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +++  +    D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L + ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSKAAAAEAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQADELAR 356

Query: 355 ASE 357
            SE
Sbjct: 357 LSE 359


>gi|237744127|ref|ZP_04574608.1| peptide chain release factor 1 [Fusobacterium sp. 7_1]
 gi|256027764|ref|ZP_05441598.1| peptide chain release factor 1 [Fusobacterium sp. D11]
 gi|289765720|ref|ZP_06525098.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11]
 gi|229431356|gb|EEO41568.1| peptide chain release factor 1 [Fusobacterium sp. 7_1]
 gi|289717275|gb|EFD81287.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11]
          Length = 357

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 166/356 (46%), Positives = 243/356 (68%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 3   DKLEEVVARYDELNKMLVSPEILADSKKMIECNKALNEITEIVEKYKEYKKYVDDIEFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   D +++++   E+   E+++ +LE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  ESFK-TEKDPDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  +KWK+E++   D + GG KEI  TI G G +SR+KFESGVH
Sbjct: 122 EAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +  +V +  +D++IDT R+ G+GGQHVN TDS
Sbjct: 182 RVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 242 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ +
Sbjct: 302 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ 357


>gi|313889382|ref|ZP_07823030.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313122214|gb|EFR45305.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 359

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  L++R+ E+   +S+   V     +++L++E A+    ++    Y +  Q  
Sbjct: 1   MNIYDQLQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEASTRDTVTAYRQYKEIIQSI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   DSEI ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  ADAEEMIKESGGDSEIEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY+++A  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  +++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEIEDVEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI HIPT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+I++ L+   Q + + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIVDALIMYDQTQKLESLN 358


>gi|330813117|ref|YP_004357356.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486212|gb|AEA80617.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 357

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 185/355 (52%), Positives = 258/355 (72%), Gaps = 3/355 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +S +++  + NR+ ++E  +S++      ++K ++EY++I  II  I  Y    ++++D
Sbjct: 1   MISLEKLESIVNRYNDLESSLSKTDIDKKEFVKNSKEYSSIGEIIETIKSYIDAIKDKED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D +SD EIR++A+ ++  I+ + +E E ++   LLPKD  D+K+ I+EIRAGTG
Sbjct: 61  LKKILSDKDSDIEIREMAEHDLEEIKSKEQEYEKKVKVFLLPKDEADEKNAIVEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  DLF MY++ +++  W+VEVLS S ++ GGYKEIV TI+G+ VFS++KFESG
Sbjct: 121 GLEASLFASDLFNMYQKVSSINGWRVEVLSVSASEAGGYKEIVFTITGKNVFSKLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVL EA E+DV I   D+RID  R+ G GGQ VNTTD
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLAEAEEVDVKIDENDLRIDVFRSGGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG++V    EKSQH+N+ +AM +LR+RLY+ ER R+ NERS  RK QIG+G
Sbjct: 241 SAVRITHIPTGVVVAIQDEKSQHKNKAKAMTILRSRLYEAERLRLENERSVARKSQIGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGR++DHRINLTL+KL   L G    ++ + L   HQ +++ +
Sbjct: 301 DRSERIRTYNFPQGRVSDHRINLTLHKLTGFLAGDDFAEMSDALQIKHQEELLEN 355


>gi|19746088|ref|NP_607224.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS8232]
 gi|24418636|sp|Q8P125|RF1_STRP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|19748260|gb|AAL97723.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           MGAS8232]
          Length = 359

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 161/358 (44%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDQKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q K + S +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDIILSGKMDEVIDALVMYDQTKKLESLN 358


>gi|260494288|ref|ZP_05814419.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33]
 gi|260198434|gb|EEW95950.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33]
          Length = 357

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 166/356 (46%), Positives = 243/356 (68%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 3   DKLEEVVARYDELNKMLVSPEILADSKKMIECNKALNEITEIVEKYKEYKKYVDDIEFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   D +++++   E+   E+++ +LE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  ESFK-TEKDPDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  +KWK+E++   D + GG KEI  TI G G +SR+KFESGVH
Sbjct: 122 EAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +  +V +  +D++IDT R+ G+GGQHVN TDS
Sbjct: 182 RVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRSGGAGGQHVNMTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 242 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ +
Sbjct: 302 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ 357


>gi|69249626|ref|ZP_00605024.1| Peptide chain release factor 1 [Enterococcus faecium DO]
 gi|257880056|ref|ZP_05659709.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933]
 gi|257882292|ref|ZP_05661945.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502]
 gi|257885488|ref|ZP_05665141.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501]
 gi|257891147|ref|ZP_05670800.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410]
 gi|257893961|ref|ZP_05673614.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408]
 gi|258614612|ref|ZP_05712382.1| peptide chain release factor 1 [Enterococcus faecium DO]
 gi|260560331|ref|ZP_05832507.1| peptide chain release factor 1 [Enterococcus faecium C68]
 gi|261208268|ref|ZP_05922941.1| peptide chain release factor 1 [Enterococcus faecium TC 6]
 gi|289565643|ref|ZP_06446089.1| peptide chain release factor 1 [Enterococcus faecium D344SRF]
 gi|293553327|ref|ZP_06673963.1| peptide chain release factor 1 [Enterococcus faecium E1039]
 gi|293563060|ref|ZP_06677526.1| peptide chain release factor 1 [Enterococcus faecium E1162]
 gi|293567649|ref|ZP_06678992.1| peptide chain release factor 1 [Enterococcus faecium E1071]
 gi|294615325|ref|ZP_06695200.1| peptide chain release factor 1 [Enterococcus faecium E1636]
 gi|294617194|ref|ZP_06696846.1| peptide chain release factor 1 [Enterococcus faecium E1679]
 gi|294623635|ref|ZP_06702473.1| peptide chain release factor 1 [Enterococcus faecium U0317]
 gi|314937739|ref|ZP_07845061.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04]
 gi|314942363|ref|ZP_07849210.1| peptide chain release factor 1 [Enterococcus faecium TX0133C]
 gi|314947687|ref|ZP_07851096.1| peptide chain release factor 1 [Enterococcus faecium TX0082]
 gi|314952118|ref|ZP_07855137.1| peptide chain release factor 1 [Enterococcus faecium TX0133A]
 gi|314992371|ref|ZP_07857803.1| peptide chain release factor 1 [Enterococcus faecium TX0133B]
 gi|314997442|ref|ZP_07862389.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01]
 gi|68194105|gb|EAN08645.1| Peptide chain release factor 1 [Enterococcus faecium DO]
 gi|257814284|gb|EEV43042.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933]
 gi|257817950|gb|EEV45278.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502]
 gi|257821344|gb|EEV48474.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501]
 gi|257827507|gb|EEV54133.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410]
 gi|257830340|gb|EEV56947.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408]
 gi|260073676|gb|EEW62002.1| peptide chain release factor 1 [Enterococcus faecium C68]
 gi|260077525|gb|EEW65243.1| peptide chain release factor 1 [Enterococcus faecium TC 6]
 gi|289162611|gb|EFD10465.1| peptide chain release factor 1 [Enterococcus faecium D344SRF]
 gi|291589584|gb|EFF21389.1| peptide chain release factor 1 [Enterococcus faecium E1071]
 gi|291591828|gb|EFF23462.1| peptide chain release factor 1 [Enterococcus faecium E1636]
 gi|291596539|gb|EFF27780.1| peptide chain release factor 1 [Enterococcus faecium E1679]
 gi|291596961|gb|EFF28174.1| peptide chain release factor 1 [Enterococcus faecium U0317]
 gi|291602551|gb|EFF32767.1| peptide chain release factor 1 [Enterococcus faecium E1039]
 gi|291604974|gb|EFF34442.1| peptide chain release factor 1 [Enterococcus faecium E1162]
 gi|313588451|gb|EFR67296.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01]
 gi|313593096|gb|EFR71941.1| peptide chain release factor 1 [Enterococcus faecium TX0133B]
 gi|313595737|gb|EFR74582.1| peptide chain release factor 1 [Enterococcus faecium TX0133A]
 gi|313598876|gb|EFR77721.1| peptide chain release factor 1 [Enterococcus faecium TX0133C]
 gi|313642877|gb|EFS07457.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04]
 gi|313645928|gb|EFS10508.1| peptide chain release factor 1 [Enterococcus faecium TX0082]
          Length = 357

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 239/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   +     +++L++E A     +     Y +  Q   D  
Sbjct: 3   DQLQAIEDRYEELGELLSDPEVISDTKRFMQLSKEEANTRETVEVYRRYKEVVQGITDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+ +LA+ E+  ++KE   LE +I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLGEKLDD-EMAELAKEELSELKKEKEVLEEKIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++YA  + WK EV+ ++    GGYKE++  I+G  V+S++K+ESG H
Sbjct: 122 EAALFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMITGDNVYSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++DI  +DIR D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVEIDIEDKDIRTDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMK+LRAR+YD  ++   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQIKNREKAMKILRARVYDKIQQEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L G +D+I++ L+   Q   + + 
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIMYDQTSKLEAM 354


>gi|145218953|ref|YP_001129662.1| peptide chain release factor 1 [Prosthecochloris vibrioformis DSM
           265]
 gi|189039984|sp|A4SCF1|RF1_PROVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145205117|gb|ABP36160.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 357

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 155/356 (43%), Positives = 231/356 (64%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             +  +K R  ++E  +++         + KL +EY+ +  I+     Y   K++ +D  
Sbjct: 3   DNLQSIKERHLDLERLLADPDAAGDQTRFRKLNKEYSDLREIVETYDRYSHIKKQLEDSR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  +  D E++ L + E+  ++++I  LE EI  LLLPKD  D ++ ILEIRAGTGG 
Sbjct: 63  QLLK-NEQDQEMKALVEEEIEELQRQIPALEQEIKVLLLPKDEADSRNVILEIRAGTGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGRGVFSRMKFESGV 182
           EAALF  DLFRMY+RYA  + W  ++L  +++   GG++E   +I+G  VF  MK+ESGV
Sbjct: 122 EAALFTTDLFRMYQRYAEKQGWNFQMLDYNESSVPGGFREATISITGHDVFGTMKYESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAA+VAVLPEA E+DV+I  ED+R+DT R+ G GGQ+VN  ++
Sbjct: 182 HRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRKEDLRLDTYRSGGKGGQNVNKVET 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG++     E+SQ QN+ RAMK+LRA+L+D++       R+  R+  + +GD
Sbjct: 242 AVRITHMPTGMVAACQEERSQLQNKERAMKMLRAKLFDIQLAEQQQARADLRRTMVATGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RS +IRTYN+ Q R+TDHRI  T + L   +QG I ++I+ L    Q + + +A +
Sbjct: 302 RSAKIRTYNYPQSRVTDHRIGFTTHALPQFMQGEIGELIDALKMHDQTERLQAAQQ 357


>gi|257867023|ref|ZP_05646676.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
 gi|257873358|ref|ZP_05653011.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
 gi|257877101|ref|ZP_05656754.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
 gi|325568363|ref|ZP_08144730.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
           12755]
 gi|257801079|gb|EEV30009.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
 gi|257807522|gb|EEV36344.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
 gi|257811267|gb|EEV40087.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
 gi|325158132|gb|EGC70285.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
           12755]
          Length = 357

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 240/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   +     +++L++E A     +     Y +  +  +D  
Sbjct: 3   DQLQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+ N D+E+ ++A+ E+  ++KE   LE  I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  EMLGE-NLDAEMAEMAKEELSDLKKEKDVLEERIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++YA  + WKVEV+ ++    GGYKE++  I+G  VFS++K+ESG H
Sbjct: 122 EAALFAGDLFNMYQKYAENQGWKVEVMDANVTGIGGYKEVIMMITGDNVFSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++DI  +DIR D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVEIDIADKDIRTDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI V    E+SQ +NR +AMKVLRAR+YD  ++   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIAVAMQDERSQLKNREKAMKVLRARVYDQMQQEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L G +D+I++ L+   Q   +   
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIVYDQTSKLDEM 354


>gi|239628684|ref|ZP_04671715.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518830|gb|EEQ58696.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 357

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 176/355 (49%), Positives = 257/355 (72%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+   + E+ L + +         + +L +E A ++PI+     Y Q KQ+ +D  
Sbjct: 3   DRLDDMLIHYEELMLMLGDPAVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N   E+R++A+ E+   +K I ELE+E+  LLLPKD +DDK+ ILEIRAG GG 
Sbjct: 63  ALLEEEND-EEMREMAKEELSDAKKRIEELEHELKILLLPKDPNDDKNIILEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  YA   +WKVE++S ++N  GG+KE+VA ++G+G +S++K+ESGVH
Sbjct: 122 EAALFAAELYRMYSNYADSHRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAV+PEA E+DV I + DIRID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDMNDIRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++  +  +  R+ QIG+GDR
Sbjct: 242 VRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQSSEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYK++ ++ G I ++++ L+ A QA  +   SE
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQAAKLAKMSE 356


>gi|66361428|pdb|1ZBT|A Chain A, Crystal Structure Of Peptide Chain Release Factor 1 (Rf-1)
           (Smu.1085) From Streptococcus Mutans At 2.34 A
           Resolution
          Length = 371

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 224/354 (63%), Gaps = 4/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   V     + +L+ E A     ++    Y Q  Q   D  
Sbjct: 17  DQLQAVEDRYEELGELLSDPDVVSDTKRFXELSREEANSRETVAVYREYKQVVQNIADAQ 76

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             I D + D E+ + A+ E+   +    E E ++ +LLLPKD +DDK+ ILEIR   GG 
Sbjct: 77  EXIKDASGDPELEEXAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGD 136

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL   Y++YA  + WK EV  +S N  GG KE+VA +SG+ V+S++K+ESG H
Sbjct: 137 EAALFAGDLLNXYQKYAENQGWKFEVXEASANGVGGLKEVVAXVSGQSVYSKLKYESGAH 196

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTS ATV V PE  E++ +I  +D+R+D   ASG+GGQ+VN   +A
Sbjct: 197 RVQRVPVTESQGRVHTSTATVLVXPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATA 256

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI H+PT I V    E++Q +NR +A K++RAR+ D   +   +E+ A RK  +G+GDR
Sbjct: 257 VRIIHLPTNIKVEXQEERTQQKNRDKAXKIIRARVADHFAQIAQDEQDAERKSTVGTGDR 316

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + +   +
Sbjct: 317 SERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEELN 370


>gi|55820816|ref|YP_139258.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
           18311]
 gi|55822719|ref|YP_141160.1| peptide chain release factor 1 [Streptococcus thermophilus
           CNRZ1066]
 gi|116627620|ref|YP_820239.1| peptide chain release factor 1 [Streptococcus thermophilus LMD-9]
 gi|81559540|sp|Q5M0B7|RF1_STRT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81560720|sp|Q5M4W4|RF1_STRT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122267782|sp|Q03L79|RF1_STRTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|55736801|gb|AAV60443.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
           18311]
 gi|55738704|gb|AAV62345.1| peptide chain release factor 1 [Streptococcus thermophilus
           CNRZ1066]
 gi|116100897|gb|ABJ66043.1| bacterial peptide chain release factor 1 (bRF-1) [Streptococcus
           thermophilus LMD-9]
 gi|312278142|gb|ADQ62799.1| Peptide chain release factor 1 [Streptococcus thermophilus ND03]
          Length = 359

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 154/358 (43%), Positives = 230/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     +     Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVIAYREYKQVIQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I + + D+++ ++A+ E+   +    E E  +  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKEASGDADLEEMAKEELKKSKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG KE+VA +SG  V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGESVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEMEYEIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +A+K++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKALKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQTQKLEELN 358


>gi|241763794|ref|ZP_04761840.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
 gi|241366926|gb|EER61331.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
          Length = 362

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 169/361 (46%), Positives = 234/361 (64%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S    +     Y  ++ E+A ++ I  + + Y Q++ 
Sbjct: 1   MKPFLRSQLERYAQRLGELDFLLSREDIMADMAQYRTISREHAEVTQIAGRYARYQQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ ++AQ E+ + E E+ +LE+E+  LLLPKD DD ++  +EIR
Sbjct: 61  DLAGAREMLA----DPDMAEMAQEEITSAEAELLQLEDELQRLLLPKDPDDARNAFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA    WKVEV+S +  + GGYKEIV  I G  V+  +K
Sbjct: 117 AGTGGDESALFAGDLTRMYMRYADRVGWKVEVVSENAAELGGYKEIVLRIEGDHVYGALK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PE  E +       D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A + +A RK 
Sbjct: 237 INKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL+YV+ G + D++  L  A +A+ +   
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLQYVMDGDLADVLQALAHAREAEQLEEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|325921457|ref|ZP_08183312.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           gardneri ATCC 19865]
 gi|325548004|gb|EGD19003.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           gardneri ATCC 19865]
          Length = 361

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 167/363 (46%), Positives = 244/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPEVVSNNDKFRTLSRELSQLEPLAVALEDEARAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     +D E+R+LA+ E+   +  + EL+ ++  LL+P+D  D+ +  LE+R
Sbjct: 61  DLSAAEAM----RNDPEMRELAEEEIATAQARLDELDAQLALLLVPRDPRDEGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +++  +    D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L + ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSKAAAAEAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQADELAR 356

Query: 355 ASE 357
            S+
Sbjct: 357 LSD 359


>gi|149185458|ref|ZP_01863774.1| protein chain release factor A [Erythrobacter sp. SD-21]
 gi|148830678|gb|EDL49113.1| protein chain release factor A [Erythrobacter sp. SD-21]
          Length = 355

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 169/357 (47%), Positives = 249/357 (69%), Gaps = 7/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +  +++  + +RFAE+E RM+      D +++ + +YA + P+    +     ++E   L
Sbjct: 3   IPAERLDQIAHRFAELEARMASGTLEGDEFVQASRDYAELEPVAKVAAEVKAAREEIASL 62

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E++ +A+ E+  ++K +   E ++   +LP+D+ D+K  +LEIRAGTGG
Sbjct: 63  EDMLA----DPEMKAMAEEELAELQKRLPAAERQLAIAMLPRDSADNKPAMLEIRAGTGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF GDLFRMYERYAA   WKVE +S + ++ GG+KEIVA+++G  VF+++KFESGV
Sbjct: 119 DEAALFAGDLFRMYERYAAEMGWKVEPVSMNASEVGGFKEIVASVTGPNVFAKLKFESGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAATVAVLPE  E+DV +   +++IDT RASG+GGQHVNTTDS
Sbjct: 179 HRVQRVPETESGGRIHTSAATVAVLPEPDEVDVQLDPTELKIDTYRASGAGGQHVNTTDS 238

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITH+PTG +V     +SQH+N+ +AM+VLR RLYD +R+      +  RK  +GSGD
Sbjct: 239 AIRITHLPTGTVVTCQDGRSQHKNKEKAMQVLRTRLYDAQREATQGAEAEARKAMVGSGD 298

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSASE 357
           RSERIRTYN+ QGR+TDHRI LTL KL  ++ G  + +++  L+   +AK + + ++
Sbjct: 299 RSERIRTYNYPQGRVTDHRIGLTLQKLPQIIAGPGLAELVEALIAEDEAKRLAAMND 355


>gi|298209284|ref|YP_003717463.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559]
 gi|83849211|gb|EAP87080.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559]
          Length = 358

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 150/357 (42%), Positives = 229/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K RF EI   + +   +     Y++LT+EY  +  ++ +   Y +     ++
Sbjct: 1   MLEKLNIVKQRFDEISDLIIQPDIISDQKRYVELTKEYKDLKKLMDERENYIRVTNRIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD E+ ++A++++   + E+  L+++I  +L+PKD +D K+ ++E+RAGTG
Sbjct: 61  AEEIIAD-GSDPEMSEMAKMQLDEAKSELPALDDKIRMMLIPKDPEDSKNAVVEVRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GD++RM  ++   + W    +  S+   GG+KEI   +SG  V+  +K+E+G
Sbjct: 120 GDEASIFAGDIYRMLTKFCESKGWNCSTVDFSEGTSGGFKEIQFEVSGDDVYGTLKYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV V PEA E DV+I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVFPEAEEFDVEIDPKDVRIDYFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTG++     +KSQH+N+ +A KVLR+RLYD+E  +   E +A R   + SG
Sbjct: 240 SAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRGSMVTSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN++QGR+TDHRINLT+Y L+ ++ G I  II+ L      + +    E
Sbjct: 300 DRSAKIRTYNYAQGRVTDHRINLTIYDLQNIIDGDIQRIIDELRLVENTEKLKETGE 356


>gi|296327945|ref|ZP_06870480.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154901|gb|EFG95683.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 365

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 166/356 (46%), Positives = 242/356 (67%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 11  DKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEFIK 70

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   DS+++++   E+   E+++ +LE E+  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 71  ESFK-TEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRGGAGGD 129

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  +KWK+E++   D + GG KEI  TI G G +SR+KFESGVH
Sbjct: 130 EAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGVH 189

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +I    +  +D++IDT R+ G+GGQHVN TDS
Sbjct: 190 RVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDTYRSGGAGGQHVNMTDS 249

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 250 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 309

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ +
Sbjct: 310 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ 365


>gi|226952752|ref|ZP_03823216.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
 gi|294650077|ref|ZP_06727461.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
           19194]
 gi|226836501|gb|EEH68884.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
 gi|292824028|gb|EFF82847.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 362

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 163/362 (45%), Positives = 242/362 (66%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   +++   +     + KL+ E+  ++ I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+   +  + ELE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEMM----KSDPDFKDMAEEEIKENKARLVELEDQLNVLMIPKDPNDANAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GGYKE++  I G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRIDGEGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   +  V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIP+G++V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|313206514|ref|YP_004045691.1| bacterial peptide chain release factor 1 (brf-1) [Riemerella
           anatipestifer DSM 15868]
 gi|312445830|gb|ADQ82185.1| bacterial peptide chain release factor 1 (bRF-1) [Riemerella
           anatipestifer DSM 15868]
 gi|325336038|gb|ADZ12312.1| Protein chain release factor A [Riemerella anatipestifer RA-GD]
          Length = 362

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 151/361 (41%), Positives = 226/361 (62%), Gaps = 6/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +K R+ E+   + +   +    +   L +EY+ +  I+     Y     
Sbjct: 1   MSKSLIPKLEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVKVFDEYSTALN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   +I D  SD ++ DLA++E       I  +E E+ YLL+PKD  DDK+ ++E+R
Sbjct: 61  AIKEADEIIAD-GSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+A+FV D++RMY  Y   + WK EV   S+    GYKE++  + G GV+  MK
Sbjct: 120 AGTGGDESAIFVEDVYRMYTMYFKSKGWKHEVTD-SNEASKGYKELIMRVEGDGVYGIMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQRVP TE+ GRVHTSA TVAVLPEA E+DV+I   DI + T R+ G+GGQ+V
Sbjct: 179 FESGVHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N  ++ V++TH PTGI+V     +SQ  NR  AM++LR +LYD+E +++  + +A RK  
Sbjct: 239 NKVETKVQLTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQGDIAAQRKTM 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + +GDRS +IRTYN+ QGR+TDHRIN ++Y L+  + G I ++++ L+ A  A+ +    
Sbjct: 299 VSTGDRSAKIRTYNYPQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAENAEKMKGEE 358

Query: 357 E 357
           E
Sbjct: 359 E 359


>gi|257467857|ref|ZP_05631953.1| peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185]
 gi|317062146|ref|ZP_07926631.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans
           ATCC 49185]
 gi|313687822|gb|EFS24657.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans
           ATCC 49185]
          Length = 358

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 244/355 (68%), Gaps = 6/355 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ ++  RF E+   +     +    K+    +  + I+PI+ K   Y +  ++   +  
Sbjct: 4   KLEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSEITPIVEKYKEYKRVVEDFDFIKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     D ++R++   E+  +E+ I ELE E+  LLLPKD +DDK+ I+EIR G GG E
Sbjct: 64  NLK-TEKDQDMREMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRGGAGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF G+LFRMY RYA  +KWK+E++   +   GG KE V +I+G G +SR+KFESGVHR
Sbjct: 123 AALFAGNLFRMYSRYAERKKWKMEIIEKQEMGIGGIKEAVFSINGFGAYSRLKFESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE++GRVHTS ATVAVLPE  +  +V I   D++IDT R+ G+GGQHVN TDSA
Sbjct: 183 VQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHVNMTDSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V    E+SQ +NR +AMK L ++L+++E ++  ++  + R+LQ+G+GDR
Sbjct: 243 VRITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECEKQRSQVESERRLQVGTGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+ QGRITDHRI  T+Y+LE  L G +D++I+ L+T  QA+M+ S SE
Sbjct: 303 SEKIRTYNYPQGRITDHRIKFTVYQLEAYLDGDLDEMIDALITFSQAEMLSSVSE 357


>gi|229496751|ref|ZP_04390462.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC
           35406]
 gi|229316297|gb|EEN82219.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC
           35406]
          Length = 362

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 235/352 (66%), Gaps = 5/352 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + +L+ RF E+ L +++   +     +++L++EY  +  +      Y++ K   Q+   +
Sbjct: 10  LQNLEARFEEVALLITDPSVIADDKRFVRLSKEYRRLEELHQAHEEYNRLKLNRQEAMEL 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D E++ LA+ E+   +++  +L+ +I  LLLP D +D K+ I+EIRAGTGG EA
Sbjct: 70  LN-GTDDEEMKALAKEEIAFADEQCPQLQEKIALLLLPDDPEDGKNAIMEIRAGTGGDEA 128

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF  DLF+MY R+     W+VEV S ++   GGYKEIV +++G   +  +K+ESGVHRV
Sbjct: 129 ALFARDLFKMYTRFVEGLGWRVEVSSYTEGTLGGYKEIVFSVTGDNAYGTLKYESGVHRV 188

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TEA GR+HTSAATVAV PEA E DV+I   D+RIDT  +SG+GGQ VNTT SAVR
Sbjct: 189 QRVPETEAQGRIHTSAATVAVFPEADEFDVEIKESDLRIDTFCSSGAGGQSVNTTYSAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTGI V +  E+SQ +N+ +A+  LR+R+Y++E ++  +E ++ RK  + +GDRS 
Sbjct: 249 IVHVPTGITVQSQDERSQLKNKAKALTELRSRIYNLEHQKYLDEVASRRKTMVSTGDRSA 308

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +IRTYN+ QGR+TDHRI LTLY L+ VL G +  II+ L     ++ +  A+
Sbjct: 309 KIRTYNYPQGRLTDHRIGLTLYNLQAVLDGDLKPIIDALSVTENSERLQEAA 360


>gi|160900908|ref|YP_001566490.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
 gi|238687199|sp|A9BP60|RF1_DELAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160366492|gb|ABX38105.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
          Length = 360

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 164/360 (45%), Positives = 237/360 (65%), Gaps = 9/360 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +Q+     R  E+   +S       +  Y  ++ E+A ++ I  + + + Q++ 
Sbjct: 1   MQDFLRQQLERYAQRLEELNFLLSREDIMGDMKQYRAISREHADVTAIAGRYARHRQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++    SD ++ D+AQ E+ + E E+ +LE+E+  LLLPKD DD ++  LEIR
Sbjct: 61  DLAAAQDML----SDPDMADMAQEEIASAEAELVQLEDELQRLLLPKDPDDARNAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY R+     WKVE++S+++++ GGYKE+V  + G  V+ R++
Sbjct: 117 AGTGGDESALFAGDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRVEGTDVYGRLR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PE  E         D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+ARL + ER     + +A RK 
Sbjct: 237 INKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSEREAKEAALRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLT+YKL  V++G + D+++ L  A +A+++   
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTIYKLLAVMEGDLGDVLDALQAAREAELLAEL 356


>gi|227552473|ref|ZP_03982522.1| peptide chain release factor RF1 [Enterococcus faecium TX1330]
 gi|257888289|ref|ZP_05667942.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733]
 gi|257896821|ref|ZP_05676474.1| peptide chain release factor 1 [Enterococcus faecium Com12]
 gi|257899725|ref|ZP_05679378.1| peptide chain release factor 1 [Enterococcus faecium Com15]
 gi|293378550|ref|ZP_06624713.1| peptide chain release factor 1 [Enterococcus faecium PC4.1]
 gi|293571480|ref|ZP_06682507.1| peptide chain release factor 1 [Enterococcus faecium E980]
 gi|227178385|gb|EEI59357.1| peptide chain release factor RF1 [Enterococcus faecium TX1330]
 gi|257824343|gb|EEV51275.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733]
 gi|257833386|gb|EEV59807.1| peptide chain release factor 1 [Enterococcus faecium Com12]
 gi|257837637|gb|EEV62711.1| peptide chain release factor 1 [Enterococcus faecium Com15]
 gi|291608485|gb|EFF37780.1| peptide chain release factor 1 [Enterococcus faecium E980]
 gi|292642879|gb|EFF61026.1| peptide chain release factor 1 [Enterococcus faecium PC4.1]
          Length = 357

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 239/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+  +++R+ E+   +S+   +     +++L++E A     +     Y +  Q   D  
Sbjct: 3   DQLQSIEDRYEELGELLSDPEVISDTKRFMQLSKEEANTRETVEVYRRYKEVVQGITDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+ +LA+ E+  ++KE   LE +I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 63  ELLGEKLDD-EMAELAKEELSELKKEKEVLEEKIKILLLPKDPNDDKNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF MY++YA  + WK EV+ ++    GGYKE++  I+G  V+S++K+ESG H
Sbjct: 122 EAALFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMITGENVYSKLKYESGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++DI  +DIR D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVEIDIEDKDIRTDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    E+SQ +NR +AMK+LRAR+YD  ++   +E  ANRK  +G+GDR
Sbjct: 242 VRLTHLPTGIVVAMQDERSQIKNREKAMKILRARVYDKIQQEAQSEYDANRKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRI LT+ KL+ +L G +D+I++ L+   Q   + + 
Sbjct: 302 SERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIMYDQTSKLEAM 354


>gi|297182760|gb|ADI18914.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0010_09O16]
          Length = 356

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 176/356 (49%), Positives = 246/356 (69%), Gaps = 3/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  K I +L +R + +E  ++        + + ++EY+ ++ I++    Y   K ++ +
Sbjct: 1   MIPEKTIEELISRHSSLEKDLASGNVDKKLFAEKSKEYSDLNEIVNSAKKYASYKNDKIE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D NSD E+  +A  E+  +  +  + E ++   LLPKD  D K+ I+EIRAGTG
Sbjct: 61  LEKILNDKNSDEELMKMAHTELSELNSQFEQNEKKLKLFLLPKDEADKKNAIIEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF GDLF+MYE+    +KW +E++S S +D GG KE++A+I G  ++S +K+ESG
Sbjct: 121 GLEASLFAGDLFKMYEKVCNKKKWSLELISISRSDAGGLKEVIASIKGNNIYSTLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+D+ I   D+RID  RA G GGQ VNTTD
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDLKINETDLRIDVFRAGGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+P+G+ V+  + KSQH+N+ + MK+LRARLY++ER R+  ERSA+RK +IG+G
Sbjct: 241 SAVRITHLPSGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQERSADRKSKIGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTL+KLE  L+G   D+II  L    Q + +   
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEEFLEGEAFDEIIESLSLKAQEESLSKL 356


>gi|269123393|ref|YP_003305970.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM
           12112]
 gi|268314719|gb|ACZ01093.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM
           12112]
          Length = 358

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 167/356 (46%), Positives = 245/356 (68%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ ++  ++ EI   +     +    KL    +  + +S I+ K  +Y  KK+  +   
Sbjct: 3   QKLDEVVEKYEEINRLLMSQEVLSDPKKLMEYNKTLSQMSEIVEKYLLYKSKKEALEQYK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +     D E+ ++  +E+  IE+EI  LE E+  LLLPKD +D+K+ I+E+RAG GG 
Sbjct: 63  EEVK-SEKDEEMLEMLNMEIDTIEEEIPRLEEELKILLLPKDPNDEKNVIVELRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFV D+FRM+ RYA   KWK E++  ++   GG KEI   ISG+G +SR+KFESGVH
Sbjct: 122 EAALFVSDIFRMFTRYAERNKWKTEIIDKNEIGVGGLKEITFLISGKGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS  TVAVLPE  +++   I   D++IDT R+SG+GGQHVNTTDS
Sbjct: 182 RVQRVPDTEASGRIHTSTITVAVLPEIDDVEQVAINPSDLQIDTYRSSGAGGQHVNTTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH PTGI+V +   +SQ +N+  AMKVL ++LY++E ++  +   A R+ Q+G+GD
Sbjct: 242 AVRITHKPTGIVVTSQDGRSQIKNKEAAMKVLASKLYEIEVEKQRSSVEAERRSQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSE+IRTYN+ QGR+TDHRI LTL++L+ +L G +D+II+ L+  +QA+++ ++ E
Sbjct: 302 RSEKIRTYNYPQGRVTDHRIKLTLHRLDAILDGALDEIIDALIAFNQAELLKNSGE 357


>gi|15839238|ref|NP_299926.1| peptide chain release factor 1 [Xylella fastidiosa 9a5c]
 gi|20139358|sp|Q9PA71|RF1_XYLFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9107880|gb|AAF85446.1|AE004071_14 peptide chain release factor 1 [Xylella fastidiosa 9a5c]
          Length = 361

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 175/362 (48%), Positives = 247/362 (68%), Gaps = 10/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+E  +S+   V   D +   + E A ++PI + ++   + K 
Sbjct: 1   MKPTLRRKLEALVERHEELERLLSDPKIVSDTDRFRTYSRELAQLAPIATTLAEETRTKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +     T+     +D E+R+LA+ E+   +  +  L+ E+  LL+P+D  D+ +  LE+R
Sbjct: 61  DLAAAETL----RTDPEMRELAEQEIAIAQAHLTTLDEELQRLLIPQDPRDECNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F G+LFRMY RYA  ++WKVEV S +  + GGYKEI+A I GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA EI        D++IDT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+PTG++V + +E+SQH NR +AMK L+A+L + ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESERSQQATAEAMTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTYNF QGRITDHR+ NLTLY L  +++G +D +I+ L   HQA+ +  
Sbjct: 297 QVGSGDRSQRIRTYNFPQGRITDHRVENLTLYDLPNIIEGDLDPLIDRLRQEHQAEELAR 356

Query: 355 AS 356
            S
Sbjct: 357 LS 358


>gi|319761653|ref|YP_004125590.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
 gi|317116214|gb|ADU98702.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
          Length = 360

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 165/361 (45%), Positives = 241/361 (66%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R +E++  +S    +     Y  ++ E+A ++ +  + + Y Q++ 
Sbjct: 1   MKPFLRSQLERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D ++ ++AQ E+ A E E+ +LE+E+  +LLPKD DD+++  +EIR
Sbjct: 61  DLEGAREMLE----DPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYAA + WKVEV+S+++++ GGYKE+V  I G   + R++
Sbjct: 117 AGTGGDESALFAGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PE  E         D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A + +A RK 
Sbjct: 237 INKTDSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSERAAKEAALRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  V++G + +++  L  A +A+++   
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAREAELLAEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|167041537|gb|ABZ06286.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_008B14]
          Length = 360

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 152/352 (43%), Positives = 230/352 (65%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +  R+ EIE  M        +     L  E A++  ++     Y +   E+ DL+
Sbjct: 6   DKLDPVLTRYNEIEEAMGRPEVATDFEQVQTLARERASLETLVDIAHRYRKLADEQGDLN 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+  +A+ E+   EK++ +L  E+   LLPKD +DD+  I+EIR+G GG+
Sbjct: 66  ALLQE-GGDAELTKMAKDELDETEKQVEQLAEELKIALLPKDPNDDRDVIVEIRSGAGGN 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  DL+R Y RYA L  W+V+V+ S+ +D GG  +IV  I G+G FSR+K+E GVH
Sbjct: 125 EASLFASDLYRAYTRYAQLHHWQVDVMDSNPSDLGGLNKIVFGIQGKGAFSRLKYERGVH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+HTS ATVAVL  A E+D+ I  +D+RID   A G GGQ+VN   +A
Sbjct: 185 RVQRVPDTEAQGRIHTSTATVAVLARADEVDIKISPDDLRIDIFHAGGHGGQNVNKVATA 244

Query: 244 VRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI + PTG  ++   E+SQ++N+ +AM +LRA+LYD E++++A ERS  R+ Q+G+ DR
Sbjct: 245 VRIVYEPTGLTVICQDERSQYKNKTKAMAMLRAKLYDAEQEKIAAERSETRRSQVGNADR 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SE+IRTYN+ Q RITDHR+  + + +  ++ G +DD+I+ L+T  Q K++  
Sbjct: 305 SEKIRTYNYPQDRITDHRVGASFHGIPRIMDGELDDLIDSLVTWEQEKLLAE 356


>gi|86152274|ref|ZP_01070485.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|121613478|ref|YP_001001255.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148925756|ref|ZP_01809444.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|157415831|ref|YP_001483087.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|166223544|sp|A1W1L4|RF1_CAMJJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047202|sp|A8FNS3|RF1_CAMJ8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85840763|gb|EAQ58014.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|87249710|gb|EAQ72669.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|145845766|gb|EDK22857.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|157386795|gb|ABV53110.1| peptide chain release factor RF-1 [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748468|gb|ADN91738.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315931656|gb|EFV10617.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           327]
          Length = 355

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K   Y +     ++   
Sbjct: 5   KLDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAGTGG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|254796771|ref|YP_003081607.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
 gi|254590013|gb|ACT69375.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
          Length = 367

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 179/352 (50%), Positives = 250/352 (71%), Gaps = 4/352 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           + ++ NR   +  R+    ++    + KL++EYA + P +  I+ Y + K+E+  L  ++
Sbjct: 8   LEEILNRHTYLADRLRCPETIPSQEFSKLSKEYAELKPKVELITRYKKLKEEQAYLELLV 67

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D EIR++ + ++ AI+  + +LE EI  +LLPKD DD  + +LE+RAGTGG EAA
Sbjct: 68  KNPLEDQEIREIGKSDLQAIQDVVPKLEFEIRRMLLPKDKDDALNVMLEVRAGTGGDEAA 127

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF   LF MY++YA   KW+ E++S S N+ GGYKE  A+ISG  VF+++KFESGVHRVQ
Sbjct: 128 LFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSEVFAKLKFESGVHRVQ 187

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TE++GR+HTS ATVAVLPE  ++DV I  +D+RID  R+SG GGQ VNTTDSAVR+
Sbjct: 188 RVPETESAGRIHTSTATVAVLPEPEDVDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRV 247

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V    EKSQH+NR +AMKVL+ RLY++ER ++  E S+ RK QIGSG+RSE+
Sbjct: 248 THIPTGIVVIQQDEKSQHKNRAKAMKVLKVRLYEIERNKVQQEISSMRKSQIGSGERSEK 307

Query: 306 IRTYNFSQGRITDHRINLTLYKLEY-VLQGYIDDIINPLLTAHQAKMIGSAS 356
            RTYNF QGRITDHRINLT Y++   V +G ++ II  L+  ++A+M+    
Sbjct: 308 TRTYNFPQGRITDHRINLTTYRINETVKEGELEPIIEALIRENEARMLAGVE 359


>gi|34763568|ref|ZP_00144503.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742325|ref|ZP_04572806.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13]
 gi|256845604|ref|ZP_05551062.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2]
 gi|294785107|ref|ZP_06750395.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27]
 gi|27886757|gb|EAA23895.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229429973|gb|EEO40185.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13]
 gi|256719163|gb|EEU32718.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2]
 gi|294486821|gb|EFG34183.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27]
          Length = 357

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 168/356 (47%), Positives = 244/356 (68%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 3   DKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   DS+++++   E+   E+++ +LE E+  LLLPKD +DDK+ I+EIRAG GG 
Sbjct: 63  ESFK-TEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  +KWK+E++   D + GG KEI  TI G G +SR+KFESGVH
Sbjct: 122 EAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +  +V +  +D++IDT RA G+GGQHVN TDS
Sbjct: 182 RVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRAGGAGGQHVNMTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 242 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ +
Sbjct: 302 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ 357


>gi|57505831|ref|ZP_00371756.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195]
 gi|57015861|gb|EAL52650.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195]
          Length = 355

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 167/358 (46%), Positives = 246/358 (68%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++     R+ E+   +S++  ++   K   L++E   + PI+ K   Y     + +
Sbjct: 1   MLAEKLQPFLKRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++    +D E  +LA+ E+  +E+E    E EI  LLLPKD +D+K+  LEIRAGT
Sbjct: 61  DNKALL----NDPEFSELAKEELKNLEEEKINFEEEIKILLLPKDPNDEKNIFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LFVGDL + Y +YA LR +K+E++SSS+   GG+KE++  + G G +SR+KFES
Sbjct: 117 GGDEASLFVGDLVKAYAKYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFES 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQR+P TE+ GR+HTSA TVA++PE  +I++ I   D++ID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRIPQTESQGRIHTSAITVAIMPEVDDIEIQINPNDLKIDVMRSSGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+G++V     KSQH+N+  AMK+L+ARLY+++      + S  RK Q+GS
Sbjct: 237 DSAVRITHIPSGLVVVNQDGKSQHKNKESAMKILKARLYEMQESERLAKESEARKSQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF Q RI+DHRINLTLY+L+ +++G + D++I PL+  HQ++ + +  
Sbjct: 297 GDRSERIRTYNFPQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIAHHQSEALKAEE 354


>gi|326790732|ref|YP_004308553.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427]
 gi|326541496|gb|ADZ83355.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427]
          Length = 357

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 166/352 (47%), Positives = 242/352 (68%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            Q+ +L +++  I  ++S+   +     + KL +E++ +  I+ K   Y    +   +  
Sbjct: 3   DQLQELVDKYHIIGDQISQPEVIADQERWQKLMKEHSDLKEIVEKYEEYKATLEAIDEAL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + D N D + R+L + E+   +K +  LENEI  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 63  M-MLDDNLDDDFRELVKEELAENKKRVEPLENEIKLLLLPKDPNDDKNVIMEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  YA   +WK E++S ++N  GG+KE++  + G+G +S++K+ESGVH
Sbjct: 122 EAALFAAELYRMYCYYAESHRWKTELMSLNENGIGGFKEVIFMVKGQGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+PATE+ GR+HTS  TVAV+PEA E+DV + + D+RID  RASG+GGQ VNTTDSA
Sbjct: 182 RVQRIPATESGGRIHTSTVTVAVMPEAEELDVQLDMNDVRIDVCRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR  H+PTG+MV    EKSQ +N+ +A+K+LR RL+D+E+ +   E +A +K  +G+GDR
Sbjct: 242 VRALHVPTGLMVYCQDEKSQLKNKEKALKILRTRLFDLEQAKAHAEMAAEKKSLVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYNF QGR+TDHR+ LTL+KLE VL G +++II+ L T  Q   + +
Sbjct: 302 SERIRTYNFPQGRVTDHRVGLTLHKLEQVLDGDLEEIISTLTTVDQTDKLKA 353


>gi|223932122|ref|ZP_03624126.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
 gi|302023743|ref|ZP_07248954.1| peptide chain release factor 1 [Streptococcus suis 05HAS68]
 gi|330832776|ref|YP_004401601.1| peptide chain release factor 1 [Streptococcus suis ST3]
 gi|223899103|gb|EEF65460.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
 gi|329306999|gb|AEB81415.1| peptide chain release factor 1 [Streptococcus suis ST3]
          Length = 359

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 153/358 (42%), Positives = 233/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E AA    ++    Y    Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNM 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I + + D+++ ++A+ E+   + +    E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV ++PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEELN 358


>gi|302384870|ref|YP_003820692.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
 gi|302195498|gb|ADL03069.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
          Length = 358

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 253/355 (71%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ D+   + E+   ++        + + KL +E A ++ ++   + Y + KQ  +D  
Sbjct: 3   DKLDDILIHYEELMQELNNPSVTEDQNRFRKLMKEQADLADLVETYTQYKKAKQTVEDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + +   E+R++A+ E+   +K+I  LE E+  LLLPKD +DDK+ ILEIRAG GG 
Sbjct: 63  ALLEEESD-EEMREMAKEELSEAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +L+RMY  YA    WKVE++S ++N  GG+KE+VA I+G+G +S+MK+ESGVH
Sbjct: 122 EAALFASELYRMYVNYAEGHHWKVELISVNENGIGGFKEVVAMITGKGAYSKMKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAV+PEA E DV I  +D+RID MRASG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVMPEAEEFDVVIEDKDVRIDVMRASGNGGQCVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI++ + +EKSQ QN+ +A ++LR++LYD+E ++  N  +  R+ QIG+GDR
Sbjct: 242 VRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQNSEAEERRSQIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLYK++ ++ G I ++++ L+ A QA  +   +E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDSLIAADQAVRLSKLNE 356


>gi|306827355|ref|ZP_07460642.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
           10782]
 gi|304430502|gb|EFM33524.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
           10782]
          Length = 359

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 162/358 (45%), Positives = 234/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D E+ ++A+ E+   +    E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNFSQ R+TDHRI LTL KL+ +L G +D++I+ L+   Q K + S +
Sbjct: 301 TGDRSERIRTYNFSQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESLN 358


>gi|262372379|ref|ZP_06065658.1| peptide chain release factor 1 [Acinetobacter junii SH205]
 gi|262312404|gb|EEY93489.1| peptide chain release factor 1 [Acinetobacter junii SH205]
          Length = 362

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 162/362 (44%), Positives = 241/362 (66%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   +++   +     + KL+ E+  ++ I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+   +  + ELE ++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEMM----KSDPDFKDMAEEEIKENKALLVELEEQLNVLMIPKDPNDANAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GGYKE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRVDGEGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   +  V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIP+G++V    E+SQH+N+ +AM +L +RL + +R       S  R+ 
Sbjct: 237 INKTDSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   
Sbjct: 297 LVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAML 356

Query: 356 SE 357
           ++
Sbjct: 357 AQ 358


>gi|225848358|ref|YP_002728521.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644346|gb|ACN99396.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 360

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 170/360 (47%), Positives = 248/360 (68%), Gaps = 5/360 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQ 57
           M      QI +++ +  ++E  +++   +    K+    +E+  +S I+S  + Y++   
Sbjct: 1   MKKKILDQIKNIEEKVKKLEQLLTDPEVLKDPSKIQSIAKEHKDLSEILSLYNQYEKVNF 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +++  +I     D ++R+LA++E+  +++E+ ELE +I    LPKD +D+K+ ILEIR
Sbjct: 61  QIEEVKQLINSTTED-DLRELAELELEELKQELSELEKKIELAFLPKDPNDEKNVILEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
            GTGG EAALF  +LFRMY+RYA    WK EVLS    D GG KE++A I G+G +SR+K
Sbjct: 120 QGTGGEEAALFAAELFRMYQRYAERHGWKTEVLSIHPTDRGGVKEVIALIKGKGAYSRLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESGVHRVQRVP TE+SGR+HTS ATVAVLPEA E+D++I  ED++I+TMRA G+GGQHV
Sbjct: 180 YESGVHRVQRVPETESSGRIHTSTATVAVLPEAEEVDIEIKPEDLKIETMRAGGAGGQHV 239

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+V    E+SQ QN+L+AM++LRARL D   +    + +  RK Q
Sbjct: 240 NTTDSAVRITHLPTGIVVQCQDERSQLQNKLKAMQILRARLKDYYDRLEREKIAKERKEQ 299

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +G+G+RSE+IRTYNF Q R+TDHR+N T Y++  +L G +D+II  L+     + +    
Sbjct: 300 VGTGERSEKIRTYNFPQNRVTDHRVNYTSYRINDILDGDLDEIIEVLIAKENEEKLAKLE 359


>gi|283956995|ref|ZP_06374467.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791496|gb|EFC30293.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 355

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K   Y +     ++   
Sbjct: 5   KLDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAGTGG E
Sbjct: 65  LL----NDPELGELAKEELKILEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|251771816|gb|EES52391.1| peptide chain release factor 1 [Leptospirillum ferrodiazotrophum]
          Length = 362

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 234/353 (66%), Gaps = 8/353 (2%)

Query: 8   QICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  +++RF E+  +M+        D Y KL  + A ++P++     + + ++E+++L  
Sbjct: 14  RLQSMRDRFDELSGKMASPEIARSPDLYRKLAMDQAELAPVVELYDQWKRLRKEQEELDL 73

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D ++ +L   E   + + +   E  +   +LPKD  D+++  +EIRAG GG E
Sbjct: 74  I----RDDPQMAELVSGEDRRLREVLEGTELRLVDAILPKDQRDERNLFIEIRAGAGGEE 129

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  +L RMY R+   + ++ EV+ S++ D GG KE +  + GR  FSR+K+ESGVHR
Sbjct: 130 AALFAAELGRMYLRFVERQGFRAEVMESNETDIGGSKEFIIYVQGRNAFSRLKYESGVHR 189

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA GR+HTS  TVA+LPEA+E++VDI  +D+RIDT  +SG+GGQ VNTT SAV
Sbjct: 190 VQRVPVTEAGGRIHTSTVTVAILPEASEVEVDIEQKDLRIDTFCSSGAGGQSVNTTYSAV 249

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIP+GI+V    E+SQ +NR +AM VLR+RL + E  R   E ++ RK  +GSGDRS
Sbjct: 250 RITHIPSGIVVSCQDERSQLKNRTKAMSVLRSRLLEQEVSRQNQEIASQRKTLVGSGDRS 309

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q R+TDHRI LTLY+L+ V++G ++ +++ L    +A+ I + S
Sbjct: 310 ERIRTYNFPQNRVTDHRIGLTLYQLDRVMEGELEPLVDALRAHDRAEEIKNIS 362


>gi|320109111|ref|YP_004184701.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
 gi|319927632|gb|ADV84707.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
          Length = 355

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 166/352 (47%), Positives = 238/352 (67%), Gaps = 8/352 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ E+E  +++   V     Y K  + +  +  +I K   + +      D H
Sbjct: 3   DRLQQMEVRYQELESELAQPEIVQDQPRYQKAMKAHRDLEILIEKFREFKEVMNGIADAH 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           T++     D +++++A+ E+  +     E+E E+  +LLPKD +D K+ +LEIRAGTGG 
Sbjct: 63  TMLA----DPDMKEMAEEELSTLMPRKTEIEEELKIMLLPKDPNDSKNVVLEIRAGTGGD 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  ++FRMY R+A   +WKVEVLS  +   GG KE+ A   G  V+S++K+ESGVH
Sbjct: 119 EAALFAEEMFRMYLRFAEQHRWKVEVLSEREGAVGGMKEVTAIFEGDQVYSQLKYESGVH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSA TVAVLPEA E+DV I  +D+RIDT  +SG GGQ VNTT SA
Sbjct: 179 RVQRVPATETQGRVHTSAITVAVLPEAEEVDVKIEAKDLRIDTFCSSGPGGQSVNTTYSA 238

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PT  +V    EKSQ +NR +AM+VLR+RLY+VE +R+   ++  RK Q+GSGDR
Sbjct: 239 IRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERVHQLQATARKAQVGSGDR 298

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SE+IRTYNF Q R+TDHRI LTL++LEYV++G +  +++ L+    A+ + +
Sbjct: 299 SEKIRTYNFPQNRLTDHRIGLTLHQLEYVMEGKLQPVVDALIAEDIAQRLKA 350


>gi|227873770|ref|ZP_03991999.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
 gi|227840386|gb|EEJ50787.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
          Length = 358

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 162/355 (45%), Positives = 240/355 (67%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + ++K  + EI   ++    V     Y KL  E  ++ PI      + + +Q E++  
Sbjct: 3   ENLEEVKKHYEEIMHNLTIPEVVSDISQYKKLILEQTSLEPIYKAYLAFRKAEQSEEEAL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ D+  D EI ++A+ E+   +++   L  EI  LLLPKD +DDK+ ++EIR G GG 
Sbjct: 63  SLL-DNEKDKEILEMAKEELQQAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRGGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G L+RMY  YA  R WK E++S ++   GG KE+V  + G G +SR+K+ESGVH
Sbjct: 122 EAALFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVDGHGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVAV+PE  ++ V+I   D+R++  R+SG+GGQH+N T SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAVMPEVEDVQVEINPADVRMEVFRSSGAGGQHINKTSSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H PTG++     E+SQ QNR +AM++LRARLY++E ++  +E +A ++ Q+G+GDR
Sbjct: 242 VRLIHEPTGLVAECQEERSQVQNREKAMRLLRARLYEIELEKQQSENAAEKRSQLGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTLY ++ VL G +D +I+PL+T  QA+ +    E
Sbjct: 302 SEKIRTYNFPQGRVTDHRIKLTLYNIDAVLSGDLDLLIDPLITEDQAEKLARLEE 356


>gi|148244818|ref|YP_001219512.1| peptide chain release factor 1 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166223616|sp|A5CW65|RF1_VESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146326645|dbj|BAF61788.1| peptide chain release factor RF-1 [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 361

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 165/361 (45%), Positives = 242/361 (67%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E+ + +S+   V     + KL+ EYA ++P+  +   Y    +
Sbjct: 1   MNSSILAKLEQLSIRLEEVSIMLSDPEVVSNVKKFTKLSIEYAQLTPVNQQFQTYLSHLK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +D   ++ +   D EI+ +A+ E+L  +K + +L+ ++   +LPKD +D ++ I+EIR
Sbjct: 61  NLEDAQLILFE--DDMEIKTMAKEEILNTKKILSQLDLKLKKSILPKDPNDSRNIIIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDLF++Y RY+  +KW +E++SSS  + GG+KEI+A ISG  V+S++K
Sbjct: 119 AGTGGDEASIFSGDLFKIYSRYSEKQKWTIEIISSSIGEHGGFKEIIARISGINVYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PE   I+       D+RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPTTESQGRIHTSACTVAIMPEVENIEEINININDVRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITH+PTG +V     +SQH+N+ +AM VL +R+ D +++    ++S+ RK 
Sbjct: 239 VNKTDSAVRITHLPTGTVVECQDGRSQHKNKAQAMSVLASRILDAQQQEQQEQQSSTRKE 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYN+ QGRITDHRINLTLYKL  +++G +  II PL+   Q   +   
Sbjct: 299 LIGSGDRSQRIRTYNYPQGRITDHRINLTLYKLTEIMEGNLSAIIKPLIIEQQTNQLTEL 358

Query: 356 S 356
           +
Sbjct: 359 N 359


>gi|171057271|ref|YP_001789620.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
 gi|238689096|sp|B1XYX1|RF1_LEPCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170774716|gb|ACB32855.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
          Length = 360

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 167/361 (46%), Positives = 237/361 (65%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +Q+     R AEI+  +++      +     L  E+A +S ++ +   Y+Q++Q
Sbjct: 1   MTPFLRQQLSRQALRLAEIDAALADPKVCSQIGTLRSLNREHARVSALVDRWQRYEQREQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     + E+ +LA+ E+ A + ++  L++E+   L+P+D DDD++  +EIR
Sbjct: 61  DLAGAQELL----DEPEMAELARAEIGAAQADLDRLDSELLTALMPRDADDDRNAFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF  DL RMY R+A  R WK E++S S +D GGYK++V  I G  VF  +K
Sbjct: 117 AGTGGEESALFAADLARMYLRHAERRGWKTELMSESVSDLGGYKDVVLHIIGDAVFEALK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           +ESG HRVQRVPATEA GR+HTSA TVAVL       +V +   ++RIDT RASG+GGQH
Sbjct: 177 YESGGHRVQRVPATEAQGRIHTSACTVAVLAEADEAEEVSLNPAELRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+TH+PTG++     ++SQH+N+ RA+ VL ARL D  R+  A + +A RK 
Sbjct: 237 INKTDSAVRVTHLPTGLVAECQDDRSQHRNKARALAVLAARLRDRVRQEQAAKDAAARKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  VL+G +D++I  L  AH A+ +   
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLGAVLEGDLDEVIGALQAAHAAEQLAEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|270157830|ref|ZP_06186487.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
 gi|269989855|gb|EEZ96109.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
          Length = 351

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 165/350 (47%), Positives = 241/350 (68%), Gaps = 7/350 (2%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  R+ E+   +SE+  +     +  L++EYA + PI +    Y + K     L  ++  
Sbjct: 1   MLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEAKDNVSSLEELLA- 59

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E+  +A  E+ + ++++ EL+ ++ + L+PKD DD+++  LEIRAGTGG EAA+F
Sbjct: 60  -GEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEAAIF 118

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            GDL+RMY RYA  + W+ E++S+S  + GGYKEI+  ISG  V+S++KFESG HRVQRV
Sbjct: 119 AGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRVQRV 178

Query: 189 PATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           P TE+ GRVHTSA TVA+LPE  E  D+ I  +D+RIDT R+SG+GGQHVN TDSA+RIT
Sbjct: 179 PETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAIRIT 238

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG++V    E+SQH+NR +AM +L+ RL D E+ +   E++  RK  +G+GDRSERI
Sbjct: 239 HIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQAQTRKSLVGTGDRSERI 298

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RTYN+ QGR+TDHRINLT+Y+L  V++G +  ++ PL   + A+++    
Sbjct: 299 RTYNYPQGRLTDHRINLTIYQLNDVMEGKLSLVVEPLKREYHAELLAELG 348


>gi|227431146|ref|ZP_03913202.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227353098|gb|EEJ43268.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 356

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 146/359 (40%), Positives = 226/359 (62%), Gaps = 9/359 (2%)

Query: 3   FLSHKQ-ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQE 58
                Q +  + + + E+  ++++   ++    Y+KL++E   I   +   + Y Q  Q+
Sbjct: 1   MDPIFQSLQTVIDHYDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQD 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            Q    ++G    D+E+  LA+ ++ A++ E  +LE ++  L+LPKD +DDK+ I+EIR 
Sbjct: 61  IQVAEELLG----DAEMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRG 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E++LF  DL  MY RYA  + W + ++  S  + GGYKE+   I+G  V+S++KF
Sbjct: 117 AAGGDESSLFAADLLDMYRRYAERQNWSMSIIDQSTTEVGGYKEVAIMITGGNVYSKLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVPATE  GRVHTS ATV V+PE  EID ++   D+  +  R+ G+GGQ+VN
Sbjct: 177 ESGAHRVQRVPATETQGRVHTSTATVGVMPEFEEIDFELNESDLEEEFFRSGGAGGQNVN 236

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
              +AVR+ H PTGIMV    E++Q +NR +A K+L +R+YD   ++  +E +A RK  +
Sbjct: 237 KVSTAVRLIHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESEYAAQRKSAV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+GDRSERIRTYN+ Q R+TDHRI LTL KL+ ++ G + ++I+ L+ A Q   +   +
Sbjct: 297 GTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQTAKLAELN 355


>gi|223039191|ref|ZP_03609481.1| peptide chain release factor 1 [Campylobacter rectus RM3267]
 gi|222879552|gb|EEF14643.1| peptide chain release factor 1 [Campylobacter rectus RM3267]
          Length = 355

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 174/356 (48%), Positives = 242/356 (67%), Gaps = 9/356 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    +R+ E+   +S+      +    KL++E + +  I S    Y Q   + +
Sbjct: 1   MLADKLQPFLDRYDELSRLLSDPSITSDIANMTKLSKEQSNLEDIASAAKSYLQTLADIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++     D+E+ +LA+ E+  +E +   LE EI  LLLPKD +DDK+  LEIRAGT
Sbjct: 61  ENKALL----DDAELGELAKDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDLF  Y RYA LR +K E++S S+ + GG+KEI+  I G+G +SR+KFE 
Sbjct: 117 GGDEAALFAGDLFNAYARYAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTSA TVA++PE  + +++I   D+RID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRVHTSAVTVAIMPEVEDSEIEINPNDLRIDVMRSSGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+VT    KSQH+N+  AMKVL+ARLY+++ +    + ++ RK Q+G+
Sbjct: 237 DSAVRITHIPTGIVVTNQDGKSQHKNKEAAMKVLKARLYEIQEEERVAKETSERKSQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           GDRS RIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+  +QA+ I  
Sbjct: 297 GDRSGRIRTYNFPQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIAHYQAEAISE 352


>gi|83816205|ref|YP_445488.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855]
 gi|294507374|ref|YP_003571432.1| peptide chain release factor 1 [Salinibacter ruber M8]
 gi|119361602|sp|Q2S2U3|RF1_SALRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83757599|gb|ABC45712.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855]
 gi|294343702|emb|CBH24480.1| peptide chain release factor 1 [Salinibacter ruber M8]
          Length = 357

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 153/359 (42%), Positives = 236/359 (65%), Gaps = 8/359 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEE 59
            +  +++  +K+RF E+E  M++    +      +L +E++ +  ++  I  Y++   E 
Sbjct: 1   MIEREKLDKVKHRFQEVESLMADPEVANDPDRMRELGQEHSRLEEVVEAIDRYERLLDER 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +L  +I D +   E+  LA+ E+  +E ++  +E ++   L+PKD +++K+ I+EIRAG
Sbjct: 61  DELEGMIRDESG--EMEALAKEELEQLETKLPAVEEDLKQKLIPKDPEEEKNAIVEIRAG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA+LF GDLFR+Y +YA  + W  E++ +S    GG++E++  + G  V+  +K+E
Sbjct: 119 AGGDEASLFAGDLFRLYTQYAKQQGWTYELIDASPGTQGGFREVIFAVKGEDVYGTLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           +GVHRVQRVP TE+SGR+HTSAATVAVLPEA E+DVDI   D+ I+T +A+G GGQ VNT
Sbjct: 179 AGVHRVQRVPETESSGRIHTSAATVAVLPEAEEVDVDINPSDLTIETFKATGPGGQSVNT 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRI H P+G+ V    EKSQH+NR +AM+VLR+R+Y+ +R+    ER   R+  +G
Sbjct: 239 TDSAVRIKHAPSGVEVSCQDEKSQHKNRSKAMRVLRSRVYEKKREEQQAEREEARRSMVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRI--NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SGDRS +IRTYNF Q R+TDHR+      + L+ ++ G ID II+ L     A+ + + 
Sbjct: 299 SGDRSAKIRTYNFPQDRVTDHRLEGGQKNHSLQPIMDGEIDPIIDALRAEEHAEKLANL 357


>gi|315023545|gb|EFT36549.1| Peptide chain release factor 1 [Riemerella anatipestifer RA-YM]
          Length = 362

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 151/361 (41%), Positives = 226/361 (62%), Gaps = 6/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +K R+ E+   + +   +    +   L +EY+ +  I+     Y     
Sbjct: 1   MSKSLIPKLEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVFDEYSTALN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   +I D  SD ++ DLA++E       I  +E E+ YLL+PKD  DDK+ ++E+R
Sbjct: 61  AIKEADEIIAD-GSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+A+FV D++RMY  Y   + WK EV   S+    GYKE++  + G GV+  MK
Sbjct: 120 AGTGGDESAIFVEDVYRMYTMYFKSKGWKHEVTD-SNEASKGYKELIMRVEGDGVYGIMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQRVP TE+ GRVHTSA TVAVLPEA E+DV+I   DI + T R+ G+GGQ+V
Sbjct: 179 FESGVHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N  ++ V++TH PTGI+V     +SQ  NR  AM++LR +LYD+E +++  + +A RK  
Sbjct: 239 NKVETKVQLTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQGDIAAQRKTM 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + +GDRS +IRTYN+ QGR+TDHRIN ++Y L+  + G I ++++ L+ A  A+ +    
Sbjct: 299 VSTGDRSAKIRTYNYPQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAENAEKMKGEE 358

Query: 357 E 357
           E
Sbjct: 359 E 359


>gi|258544629|ref|ZP_05704863.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
 gi|258520137|gb|EEV88996.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
          Length = 360

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 239/355 (67%), Gaps = 9/355 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +++  L+ R+ E+   ++        D   +  +E+A ++P+I+ +   +  +++  DL
Sbjct: 6   REKLASLRERYDELNGLLALPETAADPDQLRRYAQEHAQLAPVIAILDDTEALERQLADL 65

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +     +D E+ +LA  E  A+E +I   E+++   ++PKD  D     LEIRAGTGG
Sbjct: 66  ADL----ETDPEMAELAAAERPALEAQIAANEHQLARHMIPKDPLDGADIYLEIRAGTGG 121

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAA+F GDLFRMY +YA  + WK+E+LS +  + GGYKEI++ ISG  V+S +K+ESG 
Sbjct: 122 DEAAIFAGDLFRMYGKYAEQKNWKIEILSENPGEHGGYKEIISQISGNNVYSTLKYESGA 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HRVQRVP TE+ GR+HTSAATVA+LP       ++I   D+++DT RASG+GGQHVN TD
Sbjct: 182 HRVQRVPETESGGRIHTSAATVAILPVGDDIQPIEINPADLKVDTYRASGAGGQHVNKTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+RITH+P+GI+V    E+SQH+NR +AM++L ARL DVER +  NE++A RK  +GSG
Sbjct: 242 SAIRITHLPSGIVVECQEERSQHKNRAKAMRLLAARLLDVERTKAQNEQAAERKSLVGSG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYN+ Q R+TDHRINLTLY L  +L+G +D II PL    +A  +   
Sbjct: 302 DRSERIRTYNYPQSRVTDHRINLTLYSLADILEGGLDAIITPLQQEQEANALLDL 356


>gi|78187994|ref|YP_378332.1| peptide chain release factor 1 [Chlorobium chlorochromatii CaD3]
 gi|119361520|sp|Q3AUE2|RF1_CHLCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78170193|gb|ABB27289.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           chlorochromatii CaD3]
          Length = 357

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 153/355 (43%), Positives = 232/355 (65%), Gaps = 6/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K +  ++E  +S+       + + KL  EY+ +  ++     Y +K  E + 
Sbjct: 1   MLDKLQAIKEKHLDLEQALSDPSLANDQERFRKLNREYSNLREVVQAFDAYQRKATELEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    SD+E++ LA+ EV  +++ + ELE  +  LLLPK+  D ++ I+EIRAGTG
Sbjct: 61  AQHLLA-TESDTEMKALAEAEVDELQETVAELEQGLKILLLPKEEADSRNVIIEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGRGVFSRMKFES 180
           G EA+LF  DL RMY+RYA  + W+ +VL  +++   GG+KE++  ISG  VF  MK+ES
Sbjct: 120 GDEASLFAADLTRMYQRYAEQKGWQYKVLDYNESSVPGGFKEMILEISGNNVFGTMKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSA +VAVLPEA E+DV+I  +D+R DT R+ G GGQ+VN  
Sbjct: 180 GVHRVQRVPDTEAQGRIHTSAVSVAVLPEAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AVRITH+PTGI+     E+SQ QN+ RAM++LR +LYD++      +R+  R+  + +
Sbjct: 240 ETAVRITHMPTGIVAACQEERSQLQNKERAMQMLRTKLYDIQLAEQQQQRADLRRTMVAT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRS +IRTYN+ Q R+TDHRI  T + L  ++QG + ++I  L+   QA+ + S
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTSHALPQIMQGELHEVIEALIMHDQAERLKS 354


>gi|42518855|ref|NP_964785.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
 gi|227889713|ref|ZP_04007518.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
 gi|268319749|ref|YP_003293405.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
           FI9785]
 gi|61214647|sp|Q74K25|RF1_LACJO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41583141|gb|AAS08751.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
 gi|227849577|gb|EEJ59663.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
 gi|262398124|emb|CAX67138.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
           FI9785]
 gi|329667598|gb|AEB93546.1| peptide chain release factor 1 [Lactobacillus johnsonii DPC 6026]
          Length = 362

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y    +E  D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I    SD+++ ++A+ E   +EKE+ ELE+EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIS-TESDNDLVEMAKEENSELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRVPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +  ++  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDQYDAKRKESVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+IIN L+  +Q + +   +E
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIINALVLYYQTQQLEKMAE 359


>gi|322434298|ref|YP_004216510.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9]
 gi|321162025|gb|ADW67730.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9]
          Length = 358

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 154/352 (43%), Positives = 230/352 (65%), Gaps = 7/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+  +   MS+         +  + +E+  + PI+ K   Y +      +  
Sbjct: 3   DRLAQMEVRYDSLSRDMSDPVLVNDQKKFQAIAKEHRLMEPIVEKYRQYRKVADGIAEAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD +++++A+ E+ ++E ++  +   +  +LLPKD +DDK+ ++E+RAGTGG 
Sbjct: 63  AMLSE--SDPDLKEMAKEELASLEPQLEPIAEALKVMLLPKDPNDDKNIVIELRAGTGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGV 182
           EAALFV ++FR+Y R A   +WKV+VLS S +  G G K++ A   G  V+S+MK+ESGV
Sbjct: 121 EAALFVAEMFRVYLRLAEQHRWKVQVLSESFSGIGNGLKDVTAIFEGDRVYSQMKYESGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE  GRVHTSA TVAVLPEA E+D+ I  +D+R+DT  +SG GGQ VNTT S
Sbjct: 181 HRVQRVPATETQGRVHTSAITVAVLPEAEEVDIKIEAKDLRVDTFCSSGPGGQSVNTTYS 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITH+PT  +V    EKSQ +NR +AM+VLR+RLY+V  +      +  RK Q+G+GD
Sbjct: 241 AIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVAEETRHQAEAKIRKDQVGTGD 300

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           RSE+IRTYNF Q R+TDHRI LT + L  V++G +   I+ L+    A+ + 
Sbjct: 301 RSEKIRTYNFPQNRLTDHRIGLTNHNLNMVMEGQLQPTIDALIAHDIAEKMK 352


>gi|237740336|ref|ZP_04570817.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31]
 gi|229422353|gb|EEO37400.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31]
          Length = 357

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 163/356 (45%), Positives = 240/356 (67%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 3   DKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   D +++++   E+   E+++  LE E+  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 63  ESFK-TEKDPDMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  +KWK+E++   D +  G KE+  TI G G +SR+KFESGVH
Sbjct: 122 EAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +  +V +  +D++IDT R+ G+GGQHVN TDS
Sbjct: 182 RVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 242 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ +
Sbjct: 302 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ 357


>gi|237753220|ref|ZP_04583700.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375487|gb|EEO25578.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 356

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 171/354 (48%), Positives = 242/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     R+ EI   + +   ++      +L++E + +  ++ K   Y    Q  ++   
Sbjct: 5   KLQPFIKRYDEISTLLVDPNILNDIKRITELSKEQSDLEELVEKARAYLNNLQSIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+ DLA+ E+   E +  +LE EI  LLLPKD +DDK+  LE+RAGTGG E
Sbjct: 65  LL----DDKELGDLAKEEIKETETQNVKLEAEIKVLLLPKDPNDDKNIYLELRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A +FVGDLFR Y RYA L+ WKVE++SSS+N  GGYKEI+A + G+G +SR+K+E G HR
Sbjct: 121 AGIFVGDLFRAYVRYADLKGWKVEIISSSENSVGGYKEIIALVKGKGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTSA TVA++PE  +++V I   D+RI+  RA G GGQ VNTTDSAV
Sbjct: 181 VQRVPATESQGRVHTSAITVAIMPEVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI V+   EKSQH+N+ +AMK+L+AR+Y+ E +    + +  RK Q+GSGDRS
Sbjct: 241 RITHIPTGISVSMQDEKSQHKNKDKAMKILKARIYEAELEAQMEQNAEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R+TDHR+ LTLY LE ++  G +D +I+P++   QA+ + ++ 
Sbjct: 301 ERIRTYNYPQNRLTDHRVGLTLYSLEEIMLSGNLDSVIDPIVAYFQAEALQNSG 354


>gi|227892680|ref|ZP_04010485.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
           16047]
 gi|227865551|gb|EEJ72972.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
           16047]
          Length = 362

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y Q K+E +D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKK 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I   +SD ++ ++A+ E   IEKEI +LE +I  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIS-GDSDPDLVEMAKEENSEIEKEIPKLEEQIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +   +  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LT+ KL+ V+ G +D+II+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359


>gi|71275264|ref|ZP_00651551.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
 gi|170731262|ref|YP_001776695.1| peptide chain release factor 1 [Xylella fastidiosa M12]
 gi|238687964|sp|B0U5Z3|RF1_XYLFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71164073|gb|EAO13788.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
 gi|167966055|gb|ACA13065.1| peptide chain release factor 1 [Xylella fastidiosa M12]
          Length = 361

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 173/362 (47%), Positives = 246/362 (67%), Gaps = 10/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+E  +S+       D +   + E A ++PI + ++   + K 
Sbjct: 1   MKPTLRRKLEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +     T+     +D E+R+LA+ E+   +  +  L+ ++  LL+P+D  D+ +  LE+R
Sbjct: 61  DLAAAETL----RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F G+LFRMY RYA  ++WKVEV S +  + GGYKEI+A I GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA EI        D++IDT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+PTG++V + +E+SQH NR +AMK L+A+L + ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESERSQQATAEAMTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTYNF QGRITDHR+ NLTLY L  +++G +D +I+ L   HQA+ +  
Sbjct: 297 QVGSGDRSQRIRTYNFPQGRITDHRVENLTLYDLPNIIEGDLDPLIDRLRQEHQAEELAR 356

Query: 355 AS 356
            S
Sbjct: 357 LS 358


>gi|162147699|ref|YP_001602160.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542323|ref|YP_002274552.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|189039975|sp|A9HJ50|RF1_GLUDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161786276|emb|CAP55858.1| putative peptide chain release factor 1 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530000|gb|ACI49937.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 352

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 241/355 (67%), Gaps = 5/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                ++  +  R  E++  ++E    +A+ K + EYA + PI+ +I      +QEE+  
Sbjct: 1   MGLDDRLDRIVARSEELQAALAEGLVGEAFAKASREYAELEPIVDRIGELRLAEQEERQS 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     D E+R+LA+ E+  +   I  L  +I   +LP+D  D++S ILEIR   GG
Sbjct: 61  QALLA----DPEMRELAEAELEDLRARIPVLRQDIRIAMLPRDEADERSAILEIRPAAGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  +LF  Y RYAALR W+ E++   +++ GG +E +A I+GRGVF+R+K+ESGV
Sbjct: 117 DEAALFAAELFDAYRRYAALRGWRFEIMEFDESELGGLREGIANITGRGVFARLKYESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GR+HTS  TVAVLPEA ++DV I   D+RID  RASG+GGQHVN T+S
Sbjct: 177 HRVQRVPATESQGRIHTSTVTVAVLPEAGDVDVQINDGDLRIDVYRASGAGGQHVNKTES 236

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG++V    EKSQH+NR +AMK+L ARLY+ ER      R+A+RK Q+G+GD
Sbjct: 237 AVRITHLPTGLVVAMQEEKSQHKNRAKAMKILMARLYERERAAAHATRAADRKSQVGTGD 296

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHRINLT YK++ V+ G  D+ ++ L    QA ++ +  
Sbjct: 297 RSERIRTYNFPQGRVTDHRINLTAYKIDRVMMGEFDEFVDALTQDEQASLLAAEG 351


>gi|86149291|ref|ZP_01067522.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|218563201|ref|YP_002344981.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|20139359|sp|Q9PM63|RF1_CAMJE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85840073|gb|EAQ57331.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|112360908|emb|CAL35709.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|284926807|gb|ADC29159.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315927641|gb|EFV06972.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929077|gb|EFV08310.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 355

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K   Y +     ++   
Sbjct: 5   KLDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAGTGG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|194335257|ref|YP_002017051.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|238693362|sp|B4SAR5|RF1_PELPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194307734|gb|ACF42434.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 357

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 154/355 (43%), Positives = 232/355 (65%), Gaps = 6/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K +  ++E  +S+  +      + KL +EY+ +  I+    +Y   K E  +
Sbjct: 1   MLDKLQSIKEKHLDLEQLLSDPNAAADQVRFRKLNKEYSDLREIVQAYDLYAATKTELDE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    SD+E+++L Q E+  ++K++ ELE ++  LLLPK+  D ++ I+EIRAGTG
Sbjct: 61  SRQLLK-SESDAEMKELVQAEISELQKKLPELEQQLKILLLPKEEADSRNVIIEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGRGVFSRMKFES 180
           G EAALF  DL RMY+RYA  + W+ E L  +++   GG++EI  +++G  V+  MK+ES
Sbjct: 120 GEEAALFAADLTRMYQRYAEHQGWQCETLHFNESSVPGGFREITLSVNGHDVYGTMKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSA +VAVLPEA E+DV+I  ED+R DT R+ G GGQ+VN  
Sbjct: 180 GVHRVQRVPDTETQGRIHTSAVSVAVLPEAEEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239

Query: 241 DSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AVRITH+PTGI+     ++SQ QN+ RAM++LR +LYD++      +R+  R+  + +
Sbjct: 240 ETAVRITHMPTGIVSACQEQRSQLQNKERAMQMLRTKLYDIQLAEQQQQRADLRRSMVTT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRS +IRTYN+ Q R+TDHRI  T + L  +LQG + DIIN L    QA  + +
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIAFTSHALPQILQGDLQDIINALKMHDQAARLQA 354


>gi|152991659|ref|YP_001357380.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
 gi|166223612|sp|A6Q6B4|RF1_SULNB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151423520|dbj|BAF71023.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
          Length = 355

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 170/358 (47%), Positives = 249/358 (69%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++    +R+ EI   +S       ++   +L++E + ++P++ K ++Y +      
Sbjct: 1   MFKEKLQPFIDRYNEISELLSSPDIASDINRMTELSKEQSGLAPLVEKANLYIETADAIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++    SD E+ DLA+ E+  +E  + +LE EI  L++PKD +DDK+  LE+RAG 
Sbjct: 61  ENKELL----SDEELGDLAKEELSELEPMLPKLEEEIKILMIPKDKNDDKNIFLELRAGA 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG E+ALFV D+FRMY RYA    WKVE++S++D   GGYKE++A I G+GV+S++K+E+
Sbjct: 117 GGDESALFVADVFRMYSRYAEQMGWKVEIVSTNDGTAGGYKELIAEIKGQGVYSQLKYEA 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE  GRVHTSA TVAV+PE  +++VDI   ++++D  R+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPDTETQGRVHTSAITVAVIPEVDDVEVDIKPNEVKMDVYRSSGCGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+THIPTGI+V    EKSQH+NR +AMKVL+AR+Y+ E ++  +E +  RKLQ+GS
Sbjct: 237 DSAVRLTHIPTGIVVAIQDEKSQHKNRDKAMKVLKARVYESELQKQLDETAGQRKLQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSE+IRTYN+ Q R+TDHRI LTLY L+ V+  G +  +I+PL+   Q + I  A 
Sbjct: 297 GDRSEKIRTYNYPQNRLTDHRIGLTLYALDDVMNNGNLKLVIDPLIAHAQTEAIQEAG 354


>gi|88608013|ref|YP_506293.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
 gi|119361566|sp|Q2GE03|RF1_NEOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88600182|gb|ABD45650.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
          Length = 367

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 182/352 (51%), Positives = 250/352 (71%), Gaps = 4/352 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           + ++ NR   +  R+    ++    + KL++EYA + P +  I+ Y + K+E+  L  ++
Sbjct: 8   LEEILNRHTYLADRLRCPEAIASQEFSKLSKEYAELKPKVELIARYKKLKEEQAYLELLV 67

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D EIR++ + ++ AI+  I +LE EI  +LLPKD DD  + +LE+RAGTGG EAA
Sbjct: 68  KNPLEDQEIREIGKSDLQAIQDVIPKLELEIKRMLLPKDKDDALNVMLEVRAGTGGDEAA 127

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF   LF MY++YA   KW+ E++S S N+ GGYKE  A+ISG  VF+++KFESGVHRVQ
Sbjct: 128 LFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSDVFAKLKFESGVHRVQ 187

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TE++GR+HTS ATVAVLPE  ++DV I  +D+RID  R+SG GGQ VNTTDSAVRI
Sbjct: 188 RVPETESAGRIHTSTATVAVLPEPEDVDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRI 247

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V    EKSQH+NR +AMKVLR RLY++ER ++  E S+ RK QIGSG+RSE+
Sbjct: 248 THIPTGIVVIQQDEKSQHKNRAKAMKVLRVRLYEIERNKVQQEISSMRKSQIGSGERSEK 307

Query: 306 IRTYNFSQGRITDHRINLTLYKLEY-VLQGYIDDIINPLLTAHQAKMIGSAS 356
            RTYNF QGRITDHRINLT Y++   V +G ++ II  L+  ++A+M+    
Sbjct: 308 TRTYNFPQGRITDHRINLTTYRINETVKEGELEPIIEALIRENEARMLAGVE 359


>gi|257461132|ref|ZP_05626230.1| peptide chain release factor 1 [Campylobacter gracilis RM3268]
 gi|257441506|gb|EEV16651.1| peptide chain release factor 1 [Campylobacter gracilis RM3268]
          Length = 355

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 171/358 (47%), Positives = 242/358 (67%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    +R+ E+   +S+      +     L++E  +I PI    S Y +   + +
Sbjct: 1   MLADKLKPFLDRYDELSRMLSDPAITADIANMTALSKEQRSIEPIKEAASEYLKILNQIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++    SD+++ +LA+ E+  +E +  +LE +I  LLLPKD +DDK+  LEIRAGT
Sbjct: 61  ENKALL----SDADLGELAKEELKNLETQKPQLEEKIKILLLPKDPNDDKNIFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDL   Y RYA LR +K E++S+S+   GGYKE++  + G G +SR+KFE 
Sbjct: 117 GGDEAALFAGDLLGAYLRYADLRGYKCEIVSTSEGSVGGYKEVILLVKGAGAYSRLKFEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTSA TVAV+PE  + ++ I   D+RID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRVHTSAITVAVMPEIEDSEIQINPNDLRIDVMRSSGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTG++VT    K QH+N+  AMKVL+ARLYD++ +    +   +RK Q+G+
Sbjct: 237 DSAVRITHIPTGLVVTNQDGKDQHKNKEAAMKVLKARLYDMQEQERLEKERKDRKDQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSAS 356
           GDRS RIRTYN+ Q RI+DHRINLTLY+L+ ++ G + D+II+PL+   QA+ I +A 
Sbjct: 297 GDRSGRIRTYNYPQNRISDHRINLTLYRLDAIMAGGLFDEIIDPLIAHSQAEAIANAG 354


>gi|291166475|gb|EFE28521.1| peptide chain release factor 1 [Filifactor alocis ATCC 35896]
          Length = 354

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 163/352 (46%), Positives = 243/352 (69%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             +  L+ ++ E+   +++      +D +    +E +   PII K   + Q + + +   
Sbjct: 3   DNLKALEEKYEELNKIVADPSTMNDMDKWKAYMKEISDTEPIIQKYREFKQTRDDIEGSK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   +          +   E+ + +++NE+  LL+PKD +D+K+ I+EIR G GG 
Sbjct: 63  QILEEEKDEELRELAKME-LSEKEELMEKVQNELKLLLIPKDPNDEKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G LFRMY  YA+ R WKVE++S+++   GGYKE+V  I+G+G +SR+K+ESGVH
Sbjct: 122 EAALFAGVLFRMYSMYASARNWKVEMMSANETGIGGYKEVVFMITGKGAYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS +TVAVLPE  +++V++ + D+R+D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESSGRIHTSTSTVAVLPEVDDVEVELDMNDVRVDVFRSSGNGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH PTGI+++   EKSQ +N+ +A K+L+A+LYD+E ++   E +  RK Q+GSGDR
Sbjct: 242 VRLTHKPTGIVISMQDEKSQLKNKEKAFKILKAKLYDLELEKAQKELAQERKSQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SERIRTYN+ QGR+TDHRI LTLYKLE  L G ID+I++ L+T  QA+ + S
Sbjct: 302 SERIRTYNYPQGRVTDHRIGLTLYKLENFLNGDIDEILDALITTDQAEKLQS 353


>gi|282877960|ref|ZP_06286769.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310]
 gi|281299961|gb|EFA92321.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310]
          Length = 370

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 141/359 (39%), Positives = 216/359 (60%), Gaps = 13/359 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ RF E+   ++    +     Y+KLT+EY  +  I+     Y       ++   
Sbjct: 10  KLEGLEARFEEVSTLITAPDVIADQPRYVKLTKEYKDLGDIMDIRKRYIACLNAIRESKD 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++  + +D++++++A+ E+ A E    +LE EI   L+PKD +D K+  +EIRAGTGG E
Sbjct: 70  ILA-NETDADMKEMAREELQANEDMQPQLEEEIKLALVPKDPEDAKNVQMEIRAGTGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLF MY+ Y   + W + V S ++   GGYKEI   +SG  V+  +K+ESGVHR
Sbjct: 129 AALFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAVSGDNVYGTLKYESGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GR+HTSAATVAVLPEA + +V+I   DI+ DT R+SG+GGQ+VN  +S V
Sbjct: 189 VQRVPATETQGRMHTSAATVAVLPEADQFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ +             ++  +  + Q +N+ RA+  LR  +YD E ++  ++ +  RK 
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYIDDIANRRKS 308

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            + +GDRS +IRTYN+ QGR+TDHRI  T + L+  + G I  +I+ L     A+ +  
Sbjct: 309 LVSTGDRSAKIRTYNYPQGRVTDHRIGYTTHDLQGFVNGDIQAMIDALTVEENAEKLKE 367


>gi|205355626|ref|ZP_03222396.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346403|gb|EDZ33036.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 355

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 173/354 (48%), Positives = 242/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K   Y +     ++   
Sbjct: 5   KLDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAG GG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRSYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|304440460|ref|ZP_07400349.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371212|gb|EFM24829.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 355

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 245/353 (69%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + I   ++R+ E+E  +     ++    Y K   E+A + PI+ K   Y + +++     
Sbjct: 3   ENIQVFEDRYVELEKDLVNVDVINNSALYQKTAIEHAELEPIVHKYREYKKLEEDLSGNK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D ++  L + ++  IE+E+ ++  E+  LL+PKD +D+K+ I+EIRAG GG 
Sbjct: 63  ELLTEDLDD-DMLQLVKDDIKNIEQELEKVTEELKRLLVPKDPNDNKNVIVEIRAGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF G L R Y  YA    +K +++S+++   GGYKE+V  I G+G +S++K+ESGVH
Sbjct: 122 EAALFAGVLLRQYLMYAEKCGFKTDIMSTNEIGIGGYKEVVFMIEGKGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+SGR+HTS ATVAVLPEA +++++I   DIR+D  R+SG+GGQ VNTTDSA
Sbjct: 182 RVQRVPETESSGRIHTSTATVAVLPEAEDVEIEIDPSDIRVDVFRSSGNGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI++    EKSQ +N+ +AMK+L+ +LYD+E ++ A E SA ++ QIGSGDR
Sbjct: 242 VRITHLPTGIVISCQDEKSQLKNKEKAMKILKTKLYDLELQKQAQELSAEKRSQIGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ QGR+TDHRI LT ++++ +  G +D+II+ L   ++AK I + 
Sbjct: 302 SERIRTYNYPQGRVTDHRIGLTSHRIDAINNGDLDEIIDALTQYYEAKKIENM 354


>gi|189499090|ref|YP_001958560.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1]
 gi|189494531|gb|ACE03079.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1]
          Length = 357

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 151/357 (42%), Positives = 234/357 (65%), Gaps = 6/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  LK+++  +E ++S+   +     + KL +EY+ +  I+     Y   K + ++
Sbjct: 1   MLEKLEALKDKYLRLEEQLSDPEIIADQKRFRKLNKEYSDLKEIVQGYDRYKSNKVQIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +  ++    +D E++ LA +E+  +++   EL+ ++  LLLPK+  D ++ I+EIRAGTG
Sbjct: 61  VRKMLKQE-TDPEMKSLALVELEELQELQPELDQQLKLLLLPKEEADSRNVIIEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG-YKEIVATISGRGVFSRMKFES 180
           G EAALF  DL RMY+++A  + WK +++  ++    G  KE + +ISG  V++ MKFES
Sbjct: 120 GDEAALFATDLLRMYQKFAERKGWKCDMMEFNEASIPGACKEAILSISGHDVYATMKFES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAA+VAVLPEA ++D++I  +D+++DT R+ G GGQ+VN  
Sbjct: 180 GVHRVQRVPETETQGRIHTSAASVAVLPEAEDVDIEIRKDDLQLDTFRSGGKGGQNVNKV 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AVRITH P+GI+V    E+SQ QNR RAMK+LRA+LYD +      ER+  R+  + +
Sbjct: 240 ETAVRITHTPSGIVVACQEERSQLQNRERAMKMLRAKLYDQQLAEKNRERADLRRSMVTT 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRS +IRTYNF Q R+TDHRI  T + L  +L+G +DDII  L    Q   + + +
Sbjct: 300 GDRSAKIRTYNFPQSRVTDHRIGYTSHALPQILEGNLDDIIEALKLHDQTARLQAEA 356


>gi|226226590|ref|YP_002760696.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
 gi|226089781|dbj|BAH38226.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
          Length = 356

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 162/358 (45%), Positives = 232/358 (64%), Gaps = 6/358 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQ 57
           M+     ++ +   R  E+E  +++  +        +L  E+  ++ ++++ +   + +Q
Sbjct: 1   MLSHLRDRMAEALQRAIEVEQLLADPETTKDAPRLAELGREHHRLAQVVARATRLQKAEQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           E  +   +      D +    A+ E++ +E+E   LE E+  LL+P+D  D++  I+EIR
Sbjct: 61  ELNEARELAN--GDDPDFAAEARTEMVRLEEETAVLEKELLPLLIPRDPLDERPAIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA LF GDL RMY R+   R W++E +S S+   GG KE V  +SG GVF  ++
Sbjct: 119 AGTGGDEAGLFAGDLLRMYTRFLERRGWRIEPISYSEGTLGGVKESVFKVSGDGVFGVLR 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESGVHRVQRVPATE+ GR+HTSAATVAVLPEA E+D+ I  +D+RID  R+SG GGQ V
Sbjct: 179 WESGVHRVQRVPATESQGRIHTSAATVAVLPEAEELDMRIEDKDLRIDVFRSSGPGGQSV 238

Query: 238 NTTDSAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITHIPTGI+V+   +KSQ QN+ +AM VLRARL D+       ERS  RK Q
Sbjct: 239 NTTDSAVRITHIPTGIVVSQQDQKSQLQNKAKAMDVLRARLLDLRLSEQEAERSRMRKSQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + +GDRS +IRTYNF QGR+TDHR+ LTLY ++ V+ G I   ++ L  A+  + + +
Sbjct: 299 VSTGDRSAKIRTYNFPQGRVTDHRVGLTLYDIDSVMNGEISSFLDALALANAEEKLSA 356


>gi|149925825|ref|ZP_01914089.1| peptide chain release factor 1 [Limnobacter sp. MED105]
 gi|149825942|gb|EDM85150.1| peptide chain release factor 1 [Limnobacter sp. MED105]
          Length = 360

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 166/359 (46%), Positives = 243/359 (67%), Gaps = 9/359 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R A++E  +S   + +    +  +T E + + P   + + Y   + 
Sbjct: 1   MKDSMRNRLTRLAERLADLEEFLSSQNAANDMAQFKAITRERSELLPATERFAEYLSIEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +       +    SD ++RD+A+ E+   E ++ +LE ++  LLLPKD +D ++ +LEIR
Sbjct: 61  DLNTAQEWL----SDPDMRDMAREEIAQNEAKLAQLEADLQRLLLPKDPNDHRNAMLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDLFRMY RYA  + W++EV+S+S+++ GGYKE++  ++G  V+  +K
Sbjct: 117 AGTGGDESALFAGDLFRMYTRYAERQGWQIEVMSASESELGGYKEVIIRLAGDHVYKHLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSA TVAV+ E  E + ++I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATESQGRIHTSACTVAVMAEPDEAEVIEINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITH+PTG++V    E+SQH+N+ +AMKVL  RL D   +      ++ R+ 
Sbjct: 237 INKTDSAVRITHLPTGLVVECQDERSQHKNKAKAMKVLNVRLQDKIDRERQAAEASERRS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+Y++ G + D++N L   H+A+++  
Sbjct: 297 LVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDYIMDGDLTDLMNGLTAFHEAELLAE 355


>gi|307722037|ref|YP_003893177.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306980130|gb|ADN10165.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 355

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 177/358 (49%), Positives = 252/358 (70%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    NR+ E+   +S       +    +L++E +++ PI+ K   Y    +E  
Sbjct: 1   MLADKLTPFINRYNELSEMLSSPDITSDIKRMTELSKEQSSLLPIVEKTKEYKALIEEIS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++    SD E+ D+A+ E+  +E ++  +E EI  LLLPKD +DD++ I+E+RAG 
Sbjct: 61  DSKEML----SDPEMGDMAKEELKELEPQVPLIEEEIKMLLLPKDPNDDRNIIVELRAGA 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+FVGDLF  Y RYA L+ WK+E++SSS +D GGYKE+VA I G  V+SR+K+E 
Sbjct: 117 GGDEAAIFVGDLFDAYTRYADLKGWKIELMSSSPSDAGGYKEVVALIKGEQVYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTSA TVAV+PE  +++++I   D++ID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPQTESQGRVHTSAITVAVMPEVDDVEIEINENDLKIDVMRSSGCGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+G++VT   +KSQH+NR +AMKVL+ARLYD++ +    E +A R  Q+G+
Sbjct: 237 DSAVRITHLPSGLVVTNQDQKSQHKNREKAMKVLKARLYDLQMQEAQAEDAAQRAAQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRS RIRTYN+ Q RI+DHRINLTLY+L  ++ G  +D+II PL+  HQAK++ +A 
Sbjct: 297 GDRSGRIRTYNYPQNRISDHRINLTLYRLNEIMSGGLLDEIIEPLIADHQAKIVEAAG 354


>gi|296111565|ref|YP_003621947.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154]
 gi|295833097|gb|ADG40978.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154]
          Length = 357

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 141/359 (39%), Positives = 218/359 (60%), Gaps = 9/359 (2%)

Query: 3   FLSHKQ-ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQE 58
                + +  + +R+ E+  ++++        K   L +E   +   ++  + Y Q  QE
Sbjct: 1   MDPIFKSLQTVVDRYDELNEQLADPEVAGDGQKYMALLKEAGEMRDTVAAYTRYKQVIQE 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            QD   ++     D E+  LA+ ++  +  E  +LE ++  L+LPKD +DDK+ I+EIR 
Sbjct: 61  IQDAEDML----DDDELAPLAKEDLNTLRPEKSDLEAQLKILMLPKDPNDDKNIIMEIRG 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E++LF  DL  MY RYA  ++W + ++  +  + GGYKE+   ISG  V+S++KF
Sbjct: 117 AAGGDESSLFAADLLDMYRRYAEKQRWALSIIDETTTEVGGYKEVAIMISGDNVYSKLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVP+TE  GRVHTS ATV V+PE  EID ++   D+  +  R+ G+GGQ+VN
Sbjct: 177 ESGAHRVQRVPSTETQGRVHTSTATVGVMPEFEEIDFELAESDLEEEFFRSGGAGGQNVN 236

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
              +AVR+ H PTG+MV    E++Q +NR +A K+L +R+YD   ++   E +  RK  +
Sbjct: 237 KVSTAVRLVHKPTGMMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+GDRSERIRTYN+ Q R+TDHRI LTL KL+ ++ G + +II+  + A Q   +   +
Sbjct: 297 GTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGDLGEIIDAFVIADQTAKLAELN 355


>gi|262277608|ref|ZP_06055401.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
 gi|262224711|gb|EEY75170.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
          Length = 355

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 178/355 (50%), Positives = 262/355 (73%), Gaps = 3/355 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            L   ++ ++ +R+  +E  +S++    + Y+K ++EY++I  II  +  Y +  ++++ 
Sbjct: 1   MLPINKVKEIISRYETLEKTLSQTDIDKNTYVKNSKEYSSIGDIIIDVKNYIKMVEDKEG 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D ++D E++++A++E+  I+++I +LE +I   +LPKD  D+K+ I+EIRAGTG
Sbjct: 61  SEKILEDKSADKELKEMAELELNEIKEKIGDLETKIKIFMLPKDEADEKNAIIEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF GDLF MY++ A+   WK E++S SD+D GGYKE+V +++G+ VFS++KFESG
Sbjct: 121 GLEASLFAGDLFEMYQKVASNNGWKTEIISISDSDAGGYKEVVFSVTGKNVFSKLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA ++DV I   ++RID  R+SG GGQ VNTTD
Sbjct: 181 VHRVQRVPKTETQGRVHTSAATVAVLPEAEDVDVKIDENELRIDVFRSSGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIP+GI+V+  + KSQH+N+ +A+K+LR++LY++ER ++  ERS+ RK QIGSG
Sbjct: 241 SAVRITHIPSGIVVSQQDEKSQHKNKAKALKILRSKLYELERSKLEKERSSARKSQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF QGR+TDHRINLTL+KL   L G    +I + L    Q + + +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLSDFLSGDVFSEISDALQIQFQEQQLEN 355


>gi|315038002|ref|YP_004031570.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
 gi|312276135|gb|ADQ58775.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
 gi|327183282|gb|AEA31729.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1118]
          Length = 362

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y Q K+E +D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKK 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  + SD ++ ++A+ E   IEKEI ELE++I  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIA-NESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +   +  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LT+ KL+ V+ G +D+II+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359


>gi|124515209|gb|EAY56720.1| Peptide chain release factor 1 [Leptospirillum rubarum]
          Length = 361

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 231/353 (65%), Gaps = 8/353 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++ R+ EI  +M++         Y+KL  + + +S I+S    Y +   +++DL  
Sbjct: 13  RLESMRERYREISGKMADPEVSRNPAIYMKLARDQSELSAIVSLYEHYLRIIDQQKDLQE 72

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D E  DL   E   +  E++++E+ +   +LP+D  D ++  LEIRAG GG E
Sbjct: 73  L----RQDPEFLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  +L RMY R+   + ++ EV+ ++D + GG +E +  + G G FS++KFESGVHR
Sbjct: 129 AALFARELARMYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA GR+HTS  TVA++PEA+E+DV I  +D+RIDT  AS +GGQ VNTT SAV
Sbjct: 189 VQRVPVTEAGGRIHTSTVTVAMIPEASEVDVQIDPKDLRIDTFCASSAGGQSVNTTYSAV 248

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PT I+V    E+SQ +N+ +AMKVLRARL + E+ R   + +++RK Q+G+GDRS
Sbjct: 249 RITHLPTNIVVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNEQIASDRKSQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q R+TDHRI +TLY+L+ V++G ID  ++ L    +A  I    
Sbjct: 309 ERIRTYNFPQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRAQERALEIERLE 361


>gi|262068281|ref|ZP_06027893.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC
           33693]
 gi|291378019|gb|EFE85537.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC
           33693]
          Length = 357

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 164/356 (46%), Positives = 240/356 (67%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 3   DKLEEVVARYEELNQILVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   D +++++   E+   E+++  LE E+  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 63  ESFK-TEKDPDMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  RKWK+E++   D +  G KE+  TI G G +SR+KFESGVH
Sbjct: 122 EAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +  +V +  +D++IDT R+ G+GGQHVN TDS
Sbjct: 182 RVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRSGGAGGQHVNMTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 242 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ +
Sbjct: 302 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ 357


>gi|323143931|ref|ZP_08078589.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
 gi|322416295|gb|EFY06971.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
          Length = 364

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 167/361 (46%), Positives = 240/361 (66%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+E  +S+   +   + + +L  EY+ +  +++    Y +   
Sbjct: 1   MQESIIRKLESLCERHQEVEQLLSQPEIIADQEKFRELNREYSRLQVMVNTFQDYKRAAD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +++  ++     D +++ +AQ E+   +++   LE+E+  LLLP D  DD +C LEIR
Sbjct: 61  DLEEMQAML--EGDDEDMKAMAQEELEPTKEKAAALEHELQLLLLPHDDRDDCNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF G+L+RMY +Y   + W++EV+S S+ + GGYKEI+A +SG G +  MK
Sbjct: 119 AGTGGDEAALFAGELYRMYAKYCEAKGWQLEVVSQSEGEVGGYKEIIAKLSGEGAYGYMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GRVHTSA TV VLPE       ++   D+RIDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRVHTSACTVMVLPEIPPSKAPEVNPADLRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSA+RITHIPTGI+V    E+SQH+NR RAM+VL +RL  +E  +   E++  R  
Sbjct: 239 INKTDSAIRITHIPTGIVVECQDERSQHRNRERAMEVLLSRLAKMEEDKRLAEQTEARHS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRS+RIRTYNF Q R+TDHRINLTLY+L  VL+G +D I+ P++  +QA+ +   
Sbjct: 299 ILSSGDRSDRIRTYNFPQSRVTDHRINLTLYRLSEVLEGNLDLILKPVIEEYQAEQLSEM 358

Query: 356 S 356
           +
Sbjct: 359 A 359


>gi|163846084|ref|YP_001634128.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl]
 gi|222523819|ref|YP_002568289.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl]
 gi|189039962|sp|A9WE79|RF1_CHLAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790872|sp|B9LJ02|RF1_CHLSY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163667373|gb|ABY33739.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl]
 gi|222447698|gb|ACM51964.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl]
          Length = 360

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 161/357 (45%), Positives = 219/357 (61%), Gaps = 9/357 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +  R+ E+   M++           +   E   I  I++    Y   ++  ++  
Sbjct: 3   DKLAAVAARYDELTELMAQPEVATNVTLLQQYAREQREIEDIVNAYREYQATQRAIEEAE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D  SD E+R LAQ E+    K +  LE ++  LLLP+D +D K  I+EIR G GG 
Sbjct: 63  AMLED--SDPELRALAQEELETQRKRLASLEEQLKLLLLPRDPNDSKDVIMEIRQGEGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY R+A  R WKVEV S ++N  GG KE++  I G G +S++K+E GVH
Sbjct: 121 EAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTS ATVAVLPE  E +++I  ED+RID  R++G GGQ VNTTDSA
Sbjct: 181 RVQRVPATEARGRIHTSTATVAVLPEVEETEIEIKPEDLRIDVFRSAGHGGQGVNTTDSA 240

Query: 244 VRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           VRI + P      ++     +SQ QNR RAM VLRARLY  E+++   E  A+R  Q+GS
Sbjct: 241 VRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQREIGASRLAQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+R+E+IRTYNF Q RITDHRI      L  VL G +D II  L+    A+ + ++ 
Sbjct: 301 GERAEKIRTYNFPQDRITDHRIGQNFSNLPAVLDGELDKIIEALIIYDNAERLRASG 357


>gi|206603661|gb|EDZ40141.1| Peptide chain release factor 1 [Leptospirillum sp. Group II '5-way
           CG']
          Length = 361

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 231/353 (65%), Gaps = 8/353 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++ R+ EI  +M++         Y+KL  + + +S I+S    Y +   +++DL  
Sbjct: 13  RLESMRERYREISGKMADPEVSRNPAIYMKLARDQSELSIIVSLYENYLRIIDQQKDLQE 72

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D +  DL   E   +  E++++E+ +   +LP+D  D ++  LEIRAG GG E
Sbjct: 73  L----RQDPDFLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  +L RMY R+   + ++ EV+ ++D + GG +E +  + G G FS++KFESGVHR
Sbjct: 129 AALFARELARMYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA GR+HTS  TVA++PEA+E+DV I  +D+RIDT  AS +GGQ VNTT SAV
Sbjct: 189 VQRVPVTEAGGRIHTSTVTVAMIPEASEVDVQIDPKDLRIDTFCASSAGGQSVNTTYSAV 248

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PT I+V    E+SQ +N+ +AMKVLRARL + E+ R   + +++RK Q+G+GDRS
Sbjct: 249 RITHLPTNIVVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNEQIASDRKSQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q R+TDHRI +TLY+L+ V++G ID  ++ L    +A  I    
Sbjct: 309 ERIRTYNFPQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRAQERALEIERLE 361


>gi|332877766|ref|ZP_08445507.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684346|gb|EGJ57202.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 357

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 228/354 (64%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF EI   + +   +     YI+L +EY  +  ++ K   Y        +
Sbjct: 1   MLDKLNIVKQRFDEISDLIIQPDIIADQKRYIQLNKEYKDLKELMDKREEYITVTGNLSE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD E+ ++A++++   ++ + +LE EI Y+L+PKD +D K+ ++EIRAGTG
Sbjct: 61  AEEIIAD-GSDPEMVEMAKLQLEESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDL+RMY +Y   + W   V+  ++   GGYKEI+  ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV++ + D++I    ++G GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVIVLPEAEEFDVELDMADVKIIRTTSTGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+++ HIPTGI V    EKSQH+N  +A+KVLR+RLY++E  +     SA RK  + SG
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRS +IRTYN+ QGR+TDHRI LTLY L+ V+ G +  +I+ L  A  A+ +  
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAENAEKLKE 353


>gi|224373415|ref|YP_002607787.1| peptide chain release factor 1 [Nautilia profundicola AmH]
 gi|254790893|sp|B9L5Z9|RF1_NAUPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|223590043|gb|ACM93779.1| peptide chain release factor 1 [Nautilia profundicola AmH]
          Length = 355

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 168/358 (46%), Positives = 241/358 (67%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++     ++ EI   +S       +    KL+ E  ++ PI+ K   Y+      +
Sbjct: 1   MLLDKLKPFVEKYNEINQMLSSPEITQDIKRMTKLSREARSLEPIVEKAKEYENIINTIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++     D E+ +LA+ E+   E+++ ELE EI  LLLPKD +DDK+  LEIRAGT
Sbjct: 61  EAKMML----DDPEMAELAKEELKEAEEKLPELEEEIKILLLPKDPNDDKNIFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFVGDL + Y RYA  + WKVE++S S +D GGYKEI+  I G  V+SR+K+E 
Sbjct: 117 GGDEAALFVGDLLKAYLRYADNKGWKVEIVSESKSDAGGYKEIILLIKGESVYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQR+PATE+ GR+HTSA TVA++PE  ++D+++  +DI+I+ MRA G+GGQHVN T
Sbjct: 177 GTHRVQRIPATESQGRIHTSAVTVAIMPEVDDVDIELDPKDIKIEVMRAGGAGGQHVNKT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVR+THIPTGI V+   E+SQ +N+ +AM++L+AR+++             RK Q+GS
Sbjct: 237 ESAVRMTHIPTGITVSMQDERSQQRNKEKAMQILKARVFEKLENERLAAIGEARKSQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ Q RITDHRI LTLY+LE ++ +G  D+II+PL+  +QA+ +  A 
Sbjct: 297 GDRSERIRTYNYPQNRITDHRIGLTLYRLEQIMSEGLFDEIIDPLIAHYQAEALKEAG 354


>gi|28199883|ref|NP_780197.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
 gi|71899967|ref|ZP_00682113.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
 gi|182682635|ref|YP_001830795.1| peptide chain release factor 1 [Xylella fastidiosa M23]
 gi|32129935|sp|Q87A17|RF1_XYLFT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691124|sp|B2IA85|RF1_XYLF2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28058004|gb|AAO29846.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
 gi|71730254|gb|EAO32339.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
 gi|182632745|gb|ACB93521.1| peptide chain release factor 1 [Xylella fastidiosa M23]
 gi|307578915|gb|ADN62884.1| peptide chain release factor 1 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 361

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 172/362 (47%), Positives = 246/362 (67%), Gaps = 10/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+E  +S+       D +   + E A ++PI + ++   + K 
Sbjct: 1   MKPTLRRKLEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +     T+     +D E+R+LA+ E+   +  +  L+ ++  LL+P+D  D+ +  LE+R
Sbjct: 61  DLAAAETL----RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F G+LFRMY RYA  ++WKVEV S +  + GGYKEI+A I GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA EI        D++IDT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+PTG++V + +E+SQH NR +AMK L+A+L + +R + A   +  RKL
Sbjct: 237 VNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESQRSQQATAEAMTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTYNF QGRITDHR+ NLTLY L  +++G +D +I+ L   HQA+ +  
Sbjct: 297 QVGSGDRSQRIRTYNFPQGRITDHRVENLTLYDLPNIIEGDLDPLIDRLRQEHQAEELAR 356

Query: 355 AS 356
            S
Sbjct: 357 LS 358


>gi|325956455|ref|YP_004291867.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
 gi|325333020|gb|ADZ06928.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
          Length = 362

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y Q K+E +D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKK 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  + SD ++ ++A+ E   IEKEI ELE++I  L+LPKD +DDK  I+EI    GG E
Sbjct: 67  IIA-NESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIHGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +   +  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LT+ KL+ V+ G +D+II+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359


>gi|88596258|ref|ZP_01099495.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88191099|gb|EAQ95071.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 355

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K   Y +     ++   
Sbjct: 5   KLDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAGTGG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLIKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|319957818|ref|YP_004169081.1| bacterial peptide chain release factor 1 (brf-1) [Nitratifractor
           salsuginis DSM 16511]
 gi|319420222|gb|ADV47332.1| bacterial peptide chain release factor 1 (bRF-1) [Nitratifractor
           salsuginis DSM 16511]
          Length = 355

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 170/358 (47%), Positives = 248/358 (69%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++    +R+ EI   +S       V    +L++E ++I+P++ K   Y +  +  +
Sbjct: 1   MFKEKLQPFIDRYEEINRLLSSPEIAADVKKMTELSKEQSSIAPLVEKAQKYLEISEAIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++    SD E  +LA+ E+  +E ++  LE EI  L++PKD +DDK+  LE+RAG 
Sbjct: 61  ENKAML----SDPEFGELAKEELSELEPQLPRLEEEIKVLMIPKDPNDDKNIYLELRAGA 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG E+ALFV D+F+MY R+A  + WKVE++SSS+   GGYKE++A + G GV+S++KFE+
Sbjct: 117 GGDESALFVEDMFKMYLRFAERQGWKVEIVSSSEGTAGGYKELIALVKGEGVYSKLKFEA 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVPATE  GRVHTSA TVAV+PE  ++++DI   +I++D  R+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPATETQGRVHTSAITVAVIPEVEDVEIDIKPNEIKMDVYRSSGCGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+TH+PTGI+V    EKSQH+NR +AMKVL+AR+++   +    E +  RKLQ+GS
Sbjct: 237 DSAVRLTHLPTGIVVAIQDEKSQHKNRDKAMKVLKARVHEAMMREQMEETAGQRKLQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSE+IRTYN+ Q RITDHRI LTLY L+ V+  G ++ +I+PL+   QA+ I  A 
Sbjct: 297 GDRSEKIRTYNYPQNRITDHRIGLTLYALDDVMNNGTLEQVIDPLIAHAQAEAIQEAG 354


>gi|222823061|ref|YP_002574634.1| peptide chain release factor 1 [Campylobacter lari RM2100]
 gi|254790870|sp|B9KE98|RF1_CAMLR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222538282|gb|ACM63383.1| peptide chain release factor 1 [Campylobacter lari RM2100]
          Length = 355

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 172/358 (48%), Positives = 242/358 (67%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSE---SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++     RF E+   +S+   S  +     L++E   + PI+ K   Y +   + +
Sbjct: 1   MLADKLKPFLTRFDELNTLLSDVNISNDISKMTALSKEQKNLEPIVEKAKEYLKTLDDIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++    SD E+ +LA+ E+  +E     LE E+  LLLPKD +DDK+  LEIRAGT
Sbjct: 61  ENKLLL----SDPELGELAKEELKNLELLKPNLEEELKILLLPKDPNDDKNIFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LFVGDL + Y RYA  R +K E++SSS+   GG+KEI+  I G G +SR+K+E 
Sbjct: 117 GGDEASLFVGDLVKAYIRYAENRDYKYEIVSSSEGSVGGFKEIIILIKGNGAYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTSA TVA++PE  ++++ I   D++ID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRVHTSAITVAIMPEVDDVEIQINPNDLKIDVMRSSGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI+V     KSQH+N+  AMKVL+ARL++++ +    + S  RK Q+GS
Sbjct: 237 DSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLFEMQEQERLAKESEARKSQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF Q RI+DHRINLTLY+L+ +L+G + D+I+ PL+  +QA+ +   +
Sbjct: 297 GDRSERIRTYNFPQNRISDHRINLTLYRLDAILEGGLFDEIVEPLIAYYQAEALKQEN 354


>gi|309791603|ref|ZP_07686096.1| peptide chain release factor 1 [Oscillochloris trichoides DG6]
 gi|308226321|gb|EFO80056.1| peptide chain release factor 1 [Oscillochloris trichoides DG6]
          Length = 360

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 155/357 (43%), Positives = 223/357 (62%), Gaps = 8/357 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +  R+ E+   M++   V+      +   E   +  +++    Y + +Q  ++ H
Sbjct: 3   DKLQSVVARYDELGELMAQPEVVNNLSLLQQYAREQRELEEVVNAFQAYQRARQAAEEAH 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           T++ + +SD+E+R+LA  E+ +    I +LE EI  LLLP+D +D K  I+EIR G GG 
Sbjct: 63  TMLNE-SSDAEMRELAHEELESQRTRIAQLEEEIKLLLLPRDPNDAKDVIIEIRQGEGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DL+RMY RYA LR WKVEV S +DN  GG+KE V  I G   +S++K+E GVH
Sbjct: 122 EAALFAADLYRMYVRYAELRGWKVEVDSITDNGIGGFKEAVFEIRGENAYSQLKYEGGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GR+HTS ATVAV+PE     ++I  ED+R D  R+ G GGQ VNTTDSA
Sbjct: 182 RVQRVPATEARGRIHTSTATVAVMPEVEPTVIEIKDEDVRTDVFRSGGHGGQGVNTTDSA 241

Query: 244 VRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           VR+ +        ++     +SQ +NR +AM VLRA+LY  E+++    + A+R  Q+G+
Sbjct: 242 VRLVYRGGTPDEIVVTCQDGRSQIKNREKAMSVLRAKLYAREQEKQQRAQGASRLAQVGT 301

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           G+R+E+IRTYNF Q RITDHRI      L  VL G +D II+ L+    A+ + ++ 
Sbjct: 302 GERAEKIRTYNFPQDRITDHRIGQNFSNLPGVLAGNLDKIIDALIVYDNAERLQASG 358


>gi|313678949|ref|YP_004056688.1| bacterial peptide chain release factor 1 (brf-1) [Oceanithermus
           profundus DSM 14977]
 gi|313151664|gb|ADR35515.1| bacterial peptide chain release factor 1 (bRF-1) [Oceanithermus
           profundus DSM 14977]
          Length = 358

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 153/356 (42%), Positives = 224/356 (62%), Gaps = 8/356 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L+  +  +E  + +   +     + + +  YA +  +I     Y + + E + 
Sbjct: 1   MLDKLKKLEEEYRALERELGDPEVLADAARFREKSRRYAELGEVIEAFRAYRRVQDELEQ 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D E+ ++A+ E   +E+++ ELE ++  LLLP+D  D ++ I+EIRAGTG
Sbjct: 61  ARELAA----DPELGEMAREEAAELEEKLGELEKKLELLLLPRDPADVRNAIVEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF G+LF MY RYA    ++VE+L S   D GG+ ++   + G G +   K+ESG
Sbjct: 117 GQEAALFAGNLFEMYTRYAERLGYQVEMLESHPTDLGGFSKVSFMVKGPGAYGTFKYESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTS ATVAVLPEA E DV++ + ++RID MRASG GGQ VNTTD
Sbjct: 177 VHRVQRVPATETQGRIHTSTATVAVLPEAEESDVELDMSEVRIDVMRASGPGGQGVNTTD 236

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H PTGI++T    +SQ +NR +A+ +LR+RL +++R         +R  QIG+G
Sbjct: 237 SAVRVVHEPTGIIITIQDSRSQIKNREKALSILRSRLLEMKRAEEEAALRTSRLAQIGTG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSE+IRTYNF Q R+TDHRI+ T + LE VL G +D++   L  A Q +M+   S
Sbjct: 297 ERSEKIRTYNFPQSRVTDHRIHFTTHNLEGVLAGELDELTEALKKADQERMLEELS 352


>gi|241895238|ref|ZP_04782534.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC
           33313]
 gi|241871544|gb|EER75295.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC
           33313]
          Length = 361

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 234/353 (66%), Gaps = 4/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  + +R+ E+   +S+   +     ++ L++E  ++   +     Y Q     ++  
Sbjct: 6   EKVQSVVDRYEEVSEMISDPEVIADTKRFLALSKEEGSLRETVETFKHYKQVVVGIEENE 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +DSE+ +LA+ E+  +  E   LE++I  LLLPKD +DDK+ I+EI    GG 
Sbjct: 66  EILREEANDSELEELAKEELKDLRVEKEALEDQIKILLLPKDPNDDKNIIMEIHGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E ALF  DL+ MY RYA  + W+VE++  +  + GGYKEIV  I+G  V+S++KFE+G H
Sbjct: 126 EGALFAADLYDMYVRYAEKQGWQVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE++GRVHTS ATV V+PE  ++D++I  +D+R+D  R+SG+GGQH+N T SA
Sbjct: 186 RVQRVPETESAGRVHTSTATVGVMPEYEDVDIEIADKDLRVDVYRSSGAGGQHINKTSSA 245

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V    ++SQ QNR +AM++L+AR+YD    +   E +  RK  +G+GDR
Sbjct: 246 VRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKARVYDYYASQNEAEYAEQRKTAVGTGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI L+L KL+ ++ G + D+I+ LL A Q   + + 
Sbjct: 306 SERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELSDVIDALLIADQTAKLEAL 358


>gi|328957995|ref|YP_004375381.1| peptide chain release factor 1 [Carnobacterium sp. 17-4]
 gi|328674319|gb|AEB30365.1| peptide chain release factor 1 [Carnobacterium sp. 17-4]
          Length = 358

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 237/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ E+   +S+   V       KLT+E AAI   ++    Y +  Q+  D  
Sbjct: 3   DRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVSQDISDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   DSE+ ++A+ E+  ++KE  E+E ++  L+LPKD +DD++ I+EIR   GG 
Sbjct: 63  EMLGEK-LDSEMAEMAKEELNDLKKEKTEIEEKMKILMLPKDENDDRNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF G LF MY++YA  + W+ EVL ++    GGYKEI   I+G  V+S++K+E+G H
Sbjct: 122 EAQLFAGTLFNMYQKYADAQGWRTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++++P +DIR D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVELNLPDKDIRTDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI V    E+SQ +NR +AMKVLRAR+YD  ++   +E  A RK  +G+GDR
Sbjct: 242 VRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHIQQAAQSEYDAERKSAVGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LT+ KL+ +L G +D+II+ L+   Q   +   
Sbjct: 302 SERIRTYNYPQSRVTDHRIGLTIQKLDQILSGKLDEIIDALILNDQTAKMEQL 354


>gi|309775307|ref|ZP_07670316.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916970|gb|EFP62701.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 357

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 140/356 (39%), Positives = 224/356 (62%), Gaps = 6/356 (1%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           + +  +++  + NR+ EI   M     V       KL  E A ++ ++   + Y      
Sbjct: 1   MSVMIERLEGMVNRYHEINEMMMSPEIVTDSKMLAKLGREQADLTQVVETYTEYKNSVNA 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             D   ++ +   D EI+++A++E+  +E +I E   ++  LL+PKD +D  + I+EIR 
Sbjct: 61  LDDAKALLMEE--DKEIKEMAKMEIEELEPKIEEYLGKLEILLIPKDPNDSHNAIVEIRG 118

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E  +F GDL+RMY ++A  + WK+E++   D + GG+  +   + G GV+ ++KF
Sbjct: 119 AAGGDEGNIFAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKF 178

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVP TE+ GR+HTS ATV V PE    D DI + D+ ++TMRASG+GGQH+N
Sbjct: 179 ESGSHRVQRVPKTESQGRIHTSTATVLVTPEIEAEDFDIDMNDLEVETMRASGAGGQHIN 238

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRI H PTGI+V     +SQH+NR  A+  +R+R+Y+  ++++  E+   R+ +I
Sbjct: 239 KTDSAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGVERRSKI 298

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           G+GDR+E+IRTYN+ Q R+TDHRI  T+ +L+ +++G + D+++ LL+A Q   + 
Sbjct: 299 GTGDRAEKIRTYNYPQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQQAKLA 354


>gi|213962214|ref|ZP_03390478.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno]
 gi|213955220|gb|EEB66538.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno]
          Length = 357

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 228/354 (64%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+   + +   +     YI+L +EY  +  ++ K   Y        +
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDVIADQKRYIQLNKEYKDLKELMDKREEYINVTGNLAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+E+ ++A++++   ++ + +LE EI Y+L+PKD +D K+ ++EIRAGTG
Sbjct: 61  AEEIIAD-GSDAEMVEMAKLQLDESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDL+RMY +Y   + W   V+  ++   GGYKEI+  ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV++ + D+ I    ++G GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVELNMADVNIIRTTSTGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+++ HIPTGI V    EKSQH+N  +A+KVLR+RLY++E  +     SA RK  + SG
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVLRSRLYELELAKKMEADSARRKSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRS +IRTYN+ QGR+TDHRI LTLY L+ V+ G +  +I+ L  A  A+ +  
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAENAEKLKE 353


>gi|157165147|ref|YP_001465968.1| peptide chain release factor 1 [Campylobacter concisus 13826]
 gi|166223539|sp|A7ZB10|RF1_CAMC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112801757|gb|EAT99101.1| peptide chain release factor 1 [Campylobacter concisus 13826]
          Length = 355

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 248/355 (69%), Gaps = 9/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++    +R+ EI   +S+      ++   KL++E ++I P+ +  + Y Q   + ++  
Sbjct: 4   DKLHPFLDRYDEISTLLSDPNIANDIEKMTKLSKEQSSIEPVATAATKYLQILNDIEENK 63

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D+E+ +LA+ E+ ++E    +LE EI  LLLPKD +DDK+  LEIRAGTGG 
Sbjct: 64  ALLE----DAELGELAKEELKSLEISREKLEEEIKILLLPKDPNDDKNIFLEIRAGTGGD 119

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLF  Y RYA LR +K E++S S+ + GG+KEI+  I G+G +SR+KFE G H
Sbjct: 120 EAALFAGDLFNAYIRYAELRGYKFEIVSQSEGNTGGFKEIIVLIKGKGAYSRLKFEGGTH 179

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTSA TVA++PE  + +++I   DIR+D MR+SG GGQ VNTTDSA
Sbjct: 180 RVQRVPETESQGRVHTSAVTVAIMPEVEDSEIEINPNDIRVDVMRSSGHGGQSVNTTDSA 239

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG++VT    KSQH+N+  AMKVL+ARLY+++ +    + ++ RK Q+G+GDR
Sbjct: 240 VRITHIPTGLVVTNQDGKSQHKNKEAAMKVLKARLYEMQEQERLAKETSERKSQVGTGDR 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           S RIRTYN+ Q RI+DHRINLTLY+L+ ++  G  D+II PL+T +QA+ +  A 
Sbjct: 300 SGRIRTYNYPQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLITHYQAEAMLEAG 354


>gi|313665080|ref|YP_004046951.1| peptide chain release factor 1 [Mycoplasma leachii PG50]
 gi|312949513|gb|ADR24109.1| peptide chain release factor 1 [Mycoplasma leachii PG50]
          Length = 363

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 232/353 (65%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  ++ R  +I+  + +      +  + +L +E A +  ++ K   Y +     +D  
Sbjct: 7   EALETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAK 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ ++  D+E+ +LA+IE+     ++  L+  I  +LLPKD +D+K+ I+EIR   GG 
Sbjct: 67  AIL-ENEKDTELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIVEIRGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDL RMY+ YA  + WK+ +L +S  + GGY ++V  I G  V+S++KFESG H
Sbjct: 126 EANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+ TS ATVAVLPE +E++++I   D+RIDT RASG+GGQHVNTTDSA
Sbjct: 186 RVQRVPKTEAKGRIQTSTATVAVLPEMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V +   +SQH N+  AM +LRA++Y+ E ++   +  A RK  +G+G R
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGAR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SE+IRTYN+ Q R+TDHRI LTL KL+ V++G ID+ I  L+   Q + +   
Sbjct: 306 SEKIRTYNYPQNRVTDHRIGLTLNKLDQVMEGNIDEFIIALINEEQRQKVAEQ 358


>gi|256390407|ref|YP_003111971.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
 gi|256356633|gb|ACU70130.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
          Length = 356

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 154/358 (43%), Positives = 216/358 (60%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I DL   +AE+  R+++           KL + YA + PI      Y     +      +
Sbjct: 5   IDDLLAEYAELGTRLADPSVHADADVARKLGKRYAELGPIAETYREYTSVSDDITAAEEL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +  +  E        +  +++    LE  +  LL+P+D  D+K+ ILEI+ G GG E+
Sbjct: 65  SAEDPAFGEE-------IPGLQERRTALEERLQKLLIPRDPMDEKNVILEIKGGEGGQES 117

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR------GVFSRMKFE 179
            LF GDL RMY R+A  + WK E+L S+++D GGYK++   + GR      GV++R+K+E
Sbjct: 118 MLFAGDLLRMYMRFAERQHWKTEILESTESDLGGYKDVQVAVKGRVNEAGEGVWARLKYE 177

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
            GVHRVQRVP TE+ GR+HTSAA V VLPEA +++V+I   D+RID  R+SG GGQ VNT
Sbjct: 178 GGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEDVEVEINANDLRIDVFRSSGPGGQSVNT 237

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V   +EKSQ QN+  AM++LRARL  V ++    E S  RK QI 
Sbjct: 238 TDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLLAVAQEEADREASDTRKSQIR 297

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSERIRTYNF + RI+DHR+    Y L+ VL G +D +I   + A  A  + +  
Sbjct: 298 TMDRSERIRTYNFPENRISDHRVGYKSYNLDQVLDGDLDAVIQACVEADTAAKLAAGG 355


>gi|218283971|ref|ZP_03489832.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989]
 gi|218215488|gb|EEC89026.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989]
          Length = 358

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 145/357 (40%), Positives = 220/357 (61%), Gaps = 6/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +  R+ EI   M +S  V       KL  E   ++PI+     Y +  +E ++
Sbjct: 4   MDERLEKMVERYREINDLMMQSDVVSDRKTMAKLGREQNELTPIVETYEEYKKAVEELEE 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  +   D EIR++AQ+E+  +E +I+   + +  LL+PKD +D  + ILEIR   G
Sbjct: 64  AKVLSKEE--DKEIREMAQMELEELEPKIQNYLDRLELLLVPKDPNDSHNAILEIRGAAG 121

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E  +F GDLFRMY +YA  + W+ EV+   D++ GG+  +   ++G G +  +KFESG
Sbjct: 122 GDEGNIFAGDLFRMYSKYAEAKGWRTEVIEMEDSEAGGFSLVSFKVNGEGAYGTLKFESG 181

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+HTS ATV  +PE    D DI + D+ I+TMR+SG+GGQH+N TD
Sbjct: 182 SHRVQRVPKTESQGRIHTSTATVLCMPEVEAEDFDIDMNDLEIETMRSSGAGGQHINKTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H PTGI+V     +SQH+NR  A+  +RAR+Y+  ++ +  +    R+ +IG+G
Sbjct: 242 SAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRARVYEERQRELDQKNEKERRTKIGTG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DR+E+IRTYN+ Q R+TDHRI  T+ +L+ ++ G +DD++  L  A Q   I    E
Sbjct: 302 DRAEKIRTYNYPQNRVTDHRIGYTVNQLDRIMDGRLDDLMAALQLADQQAKIAGEKE 358


>gi|224541463|ref|ZP_03682002.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525621|gb|EEF94726.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
           15897]
          Length = 358

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 148/355 (41%), Positives = 231/355 (65%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++ R+ E+   + +    +   K    ++E A++    +    Y       ++  
Sbjct: 6   ERLQTVEKRYEELTQILMDPSIANDIQKMTQASKEQASLEKAYNLYKEYKALLDGIEEAK 65

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D EI+++A++E+  +EK+   +E++I   L+PKD +D+K+ ++EIR   GG 
Sbjct: 66  ELLNE--NDPEIKEMAKMELEELEKKQPIMEHDIQIELIPKDPNDEKNVVMEIRGAAGGD 123

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E  +F GDLFRMY +YA  + WK+E+  +  ++ GGY  I   I G GV+S+MKFESG H
Sbjct: 124 EGNIFAGDLFRMYSKYAESQGWKIEIEDAQPSEAGGYSLISFIIKGNGVYSKMKFESGSH 183

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTS ATV V+PEA E+D+DI  +D+RIDT R+SG+GGQH+N TDSA
Sbjct: 184 RVQRVPKTETQGRVHTSTATVLVMPEAEEVDIDIDPKDLRIDTYRSSGAGGQHINKTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+  +   +SQH NR +AM+ LR R+Y+ + +    +    R+ +IGSGDR
Sbjct: 244 VRITHIPTGIVATSQDGRSQHDNRAKAMQSLRTRVYEAKLREEEEKLGNERRNKIGSGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +E+IRTYN+ Q R+TDHRI LT+ +L+ +++G ++ II+ L+   Q   +    E
Sbjct: 304 AEKIRTYNYPQNRVTDHRIGLTIQQLDRIMEGKLEPIIDALINEDQRLKLLGEEE 358


>gi|149907580|ref|ZP_01896327.1| peptide chain release factor 1 [Moritella sp. PE36]
 gi|149809250|gb|EDM69179.1| peptide chain release factor 1 [Moritella sp. PE36]
          Length = 362

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 232/353 (65%), Gaps = 7/353 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R  E++  + E   +   D Y  LT+EY+ +  ++S    Y   K+
Sbjct: 1   MKASIITKLEALIERHEEVQALLGEPEIISDQDRYRALTKEYSQLEELVSCFKEYQDAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D   D ++R++A  E    +  +  + +E+  LLLP+D +D  +C LEIR
Sbjct: 61  DFESAEEMLKDE--DPDMREMAVEEYKESKATVARVSDELEVLLLPRDPNDSNNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDL+RMY RYA  + W++ +++ S++D GGYKE++  + G  VF  MK
Sbjct: 119 AGAGGDEAAIFAGDLYRMYSRYAEKKGWRLTIMNLSNSDQGGYKEVIVKMEGEAVFGTMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TV V+PE  E+D   I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPETESQGRIHTSACTVVVMPEVPEVDAIVINTADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVRITHIPTG +V    E+SQH+NR RAM +L+AR+   E ++   E  + R+ 
Sbjct: 239 VNKTDSAVRITHIPTGTVVECQDERSQHKNRARAMSILQARIQAAEDEKARLEEESTRRS 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            + SGDRSERIRTYN+ QGR++DHRINLTLY+L  V++G +D +I P++  HQ
Sbjct: 299 LVASGDRSERIRTYNYPQGRVSDHRINLTLYRLNEVMEGELDVLIQPIIHEHQ 351


>gi|254457086|ref|ZP_05070514.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1]
 gi|207085878|gb|EDZ63162.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1]
          Length = 355

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 173/358 (48%), Positives = 250/358 (69%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    NR+ E+   +S       +     L++E +++ PI+ K   Y    ++  
Sbjct: 1   MLSDKLNPFINRYNELSELLSSPDITSDIKRMTALSKEQSSLLPIVEKAKEYKSIIKQIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++G    D E+ D+A+ E+  +E +I  +E  I  LLLPKD +DD++ I+E+RAG 
Sbjct: 61  ETKEMLG----DPEMIDMAKEELKELEPQIPLIEESIKLLLLPKDQNDDRNIIVELRAGA 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+FVGDLF  Y RYA ++ WKVE+LS+S +D GG+KE++A I G  V+SR+K+E 
Sbjct: 117 GGDEAAIFVGDLFDAYTRYAEVKGWKVELLSTSPSDAGGFKEVIALIKGDQVYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G+HRVQRVP TE+ GRVHTSA TVAV+PE  +++V I   D++ID MR+SG GGQ VNTT
Sbjct: 177 GIHRVQRVPETESQGRVHTSAITVAVMPEVDDVEVVINENDLKIDVMRSSGCGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++VT   +KSQH+N+ +AMKVL+ARLYD+E +   ++ S  R  Q+GS
Sbjct: 237 DSAVRITHLPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQEAQSKDSEARLAQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRS RIRTYN+ Q R++DHRI LTLY+L  ++ G  +D++I PL+T HQAK++ +A 
Sbjct: 297 GDRSGRIRTYNYPQNRMSDHRITLTLYRLNEIMNGGLLDEVIEPLITDHQAKIVEAAG 354


>gi|91762346|ref|ZP_01264311.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718148|gb|EAS84798.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 357

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 174/357 (48%), Positives = 253/357 (70%), Gaps = 3/357 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  K I DL ++ + +E  +S        + + ++EY+ ++ +I     Y   + E++D
Sbjct: 1   MIPLKTIEDLISKHSVLEKELSSGEVDKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D NSD+E +++A++E+  ++ E   +E ++   LLPKD  D K+ I+EIRAGTG
Sbjct: 61  LEKILSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  DLF+MYE+ +  +KW++E++S S ++ GG KE++A+I G+ ++S +K+ESG
Sbjct: 121 GLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+D+ I   D+RID  RA G GGQ VNTTD
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG+ V+   +KSQH+N+ + M +LR+RLY++ER R+  ERS +RK +IG+G
Sbjct: 241 SAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGERSEDRKSKIGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTL+KLE  L+G   D+++  L    Q + + + +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEAFLEGEAFDEMVENLTLQAQEEKLSNLN 357


>gi|329116672|ref|ZP_08245389.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
 gi|326907077|gb|EGE53991.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
          Length = 359

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 153/358 (42%), Positives = 228/358 (63%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A     +     Y    Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAGTRETVDVYRKYKDVIQAI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D   DS+I ++A+ E+   +      E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  ADAEEMIKDSGGDSDIEEMAREELKESKAAKETYEEQLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY+++A  + W+ EV+ ++ N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKFAESQNWRFEVMEATYNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV ++PE  E+D  I  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVDYQIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPT I V    E++Q +NR +A+K++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRMVHIPTNIKVEMQEERTQQKNRDKAIKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D+I++ L+   Q + +   +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIVDALVLYDQTQKLEDLN 358


>gi|20139347|sp|Q9AG29|RF1_STRAG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13487345|gb|AAK27505.1|AF343879_1 peptide chain release factor 1 [Streptococcus agalactiae]
          Length = 359

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 232/358 (64%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L+ E A     ++    Y Q  Q  
Sbjct: 1   MNIYDQLQPVEDRYEELGELLSDPYVVSDTKRFMELSREEANTRETVTAYREYKQVIQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I D + D+E+ ++A+ E+   +    E E  +  LLLPKD +DDK+ ILEIR  
Sbjct: 61  SDAEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ SS N  GG KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRADIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVR+ HIPTGI V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G
Sbjct: 241 VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + + + +
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEALN 358


>gi|257453431|ref|ZP_05618726.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
 gi|257449183|gb|EEV24131.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
          Length = 364

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 178/361 (49%), Positives = 252/361 (69%), Gaps = 5/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  + +RF E+   +SE  +++    + +L+ E++ +S ++     Y Q ++
Sbjct: 1   MKESLRFRLDQMSDRFEEVTAMLSEPETMNDNKKFRELSVEHSDLSALVDVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ D   D +++++AQ E+ A +  I ELE+ +N ++LPKD +D     LEIR
Sbjct: 61  DLATAEEMLSDATGDGDMKEMAQEEIQAAKDTINELEDVLNVMMLPKDPNDKVPAFLEIR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMYERYAA + W+VEVLS ++ + GGYKEI++ +SG GV+ R+K
Sbjct: 121 AGTGGDEAAIFSGDLFRMYERYAATQGWQVEVLSENEGEHGGYKEIISRVSGTGVYGRLK 180

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVAV+PE    D  DI   D+RIDT RASG+GGQH
Sbjct: 181 FESGAHRVQRVPETESQGRVHTSACTVAVMPEVEIDDTVDINPADLRIDTYRASGAGGQH 240

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTG +V    E+SQH NR +AMK+L +++   + ++  +  S  R+ 
Sbjct: 241 INKTDSAVRITHIPTGTVVECQQERSQHANRDKAMKMLVSKIQQEKVQKQIDASSDMRRN 300

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ ++QG +D++++ LL  HQA ++ S 
Sbjct: 301 LVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDAIMQGDLDELLDSLLREHQADLMASV 360

Query: 356 S 356
           S
Sbjct: 361 S 361


>gi|153952433|ref|YP_001398893.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223543|sp|A7H5W3|RF1_CAMJD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152939879|gb|ABS44620.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 355

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  ++   K   L++E   + PI+ K   Y +     ++   
Sbjct: 5   KLDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKTKEYLKTLDNIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+++  LEIRAGTGG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDLNDERNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQENERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQEQN 354


>gi|87198313|ref|YP_495570.1| peptide chain release factor 1 [Novosphingobium aromaticivorans DSM
           12444]
 gi|119361571|sp|Q2GBN7|RF1_NOVAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|87133994|gb|ABD24736.1| bacterial peptide chain release factor 1 (bRF-1) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 354

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 177/357 (49%), Positives = 249/357 (69%), Gaps = 8/357 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           + +S  ++  +  RFAE+E R++        +I  + +YA + P+        + + E  
Sbjct: 1   MSVSDARLAQIAARFAELEARLASGTLEGADFIAASRDYAELEPVARVAEEVREMRGELV 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            L  +      D ++R+LA  E+  I  E+ E E+ +   +LP+D+ D +  +LEIRAGT
Sbjct: 61  SLAAL-----DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADARPAMLEIRAGT 115

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  DLFRMYERYAA + W+VE +S + ND GGYKE+VA ++G+GVF+++KFES
Sbjct: 116 GGDEAALFAADLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQGVFAKLKFES 175

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSAATVAVLPE  E+DV I  +D++ID  RASG+GGQHVNTT
Sbjct: 176 GVHRVQRVPVTESGGRIHTSAATVAVLPEPDEVDVAIEDKDLKIDIYRASGAGGQHVNTT 235

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+G++V    E+SQH+N+ +AM+VLR RLYD+ R+      +  RK  +GS
Sbjct: 236 DSAVRITHLPSGLVVTCQDERSQHKNKAKAMQVLRTRLYDMRREAAQGAEAEARKAMVGS 295

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           GDRSERIRTYNF QGR+TDHRINLTL++L  +L+G  + ++I+ L+   Q+K + + 
Sbjct: 296 GDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLAELIDALIAEDQSKRLAAM 352


>gi|319795450|ref|YP_004157090.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
 gi|315597913|gb|ADU38979.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
          Length = 362

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 164/361 (45%), Positives = 230/361 (63%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S    +     Y  ++ E+A I+ I  +   Y Q++ 
Sbjct: 1   MKSFLRHQLERYVQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYRQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ ++A+ E+   E E+ +LE E+  LLLPKD DD ++  +EIR
Sbjct: 61  DIAGAKEML----DDPDMAEMAREEIAGAEAELVQLEEELQRLLLPKDPDDARNAFMEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RY      + E++S S ++ GGYKE+V  I G  VF +++
Sbjct: 117 AGTGGDESALFAGDLLRMYTRYCERAGLRCEIVSESASELGGYKEVVIRIVGDEVFGKLR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAVL      + V I   D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVRITHIPTGI+     ++SQH+N+ +A++VL AR+ + +R   A + +A RK 
Sbjct: 237 INKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKDRSERAAKDAAMRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  +++G + D++  L  A +A+ +   
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAIMEGDLGDVLEALRAAREAEQLAEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|294782570|ref|ZP_06747896.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA]
 gi|294481211|gb|EFG28986.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA]
          Length = 357

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 164/356 (46%), Positives = 240/356 (67%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 3   DKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   D++++++   E+   E+++  LE E+  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 63  ESFK-TEKDADMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  RKWK+E++   D +  G KE+  TI G G +SR+KFESGVH
Sbjct: 122 EAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +I    +  +D++IDT R+ G+GGQHVN TDS
Sbjct: 182 RVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVIVDPKDLKIDTYRSGGAGGQHVNMTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 242 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ +
Sbjct: 302 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ 357


>gi|325954306|ref|YP_004237966.1| peptide chain release factor 1 [Weeksella virosa DSM 16922]
 gi|323436924|gb|ADX67388.1| Peptide chain release factor 1 [Weeksella virosa DSM 16922]
          Length = 362

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 153/351 (43%), Positives = 234/351 (66%), Gaps = 5/351 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +K RF E+   + +   +     Y KL +EY+ +   + K   Y+      ++ +
Sbjct: 8   DKLRAIKQRFDEVADLIIQPDIITDQARYAKLNKEYSDLRDYVEKQEEYEGLLNVLEEAN 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I D  SD E+ +LA++E      +I +LE EI ++L+PKD +DDK+ I+E+RAGTGG 
Sbjct: 68  AIIAD-GSDEEMVELAKLEKDEALHKIPKLEEEIKFMLIPKDPEDDKNVIVELRAGTGGD 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+FV D++RMY  Y   + W+ EVL++S+    G+KE+V ++ G  V+  MK+ESGVH
Sbjct: 127 EAAIFVEDIYRMYAMYFKQKGWQHEVLNTSEASGKGFKEMVISVEGNAVYGTMKYESGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTSA TVAVLPEA E+DV+I   D+   T R+SG+GGQ+VN  ++ 
Sbjct: 187 RVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADLEYQTARSSGAGGQNVNKVETK 246

Query: 244 VRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V++TH P+GI+ V    +SQH+NR +A+++LR +LY++E ++   ERS  RK  + +GDR
Sbjct: 247 VQLTHKPSGIVIVCQEARSQHKNREKALQLLRTKLYEIEFEKKHAERSEQRKSLVSTGDR 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           S +IRTYN+ QGR+TDHRIN ++Y L+  + G I ++I+ L  A  A+ + 
Sbjct: 307 SAKIRTYNYPQGRVTDHRINKSIYNLDNFMNGDIQEMIDALKVAENAEKLK 357


>gi|195953354|ref|YP_002121644.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
 gi|229576658|sp|B4U955|RF1_HYDS0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195932966|gb|ACG57666.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
          Length = 356

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 169/360 (46%), Positives = 241/360 (66%), Gaps = 11/360 (3%)

Query: 3   FLSH---KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKK 56
            L     ++I D++ ++A+ E +++          Y  L+++   +S I      Y++  
Sbjct: 1   MLPKNFLEKIQDIEQKYAQTEEKLASLDITKDADTYKALSKDLKELSYIHELYKDYNKIL 60

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++ +D   ++     D ++R+LA+ E+  +  ++ + E E+  +L PKD +D K+ ILEI
Sbjct: 61  KDIEDTKELLK----DKDLRELAEKELENLNTKLLQKEKELINVLTPKDANDSKNVILEI 116

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           RAG GG EAALF  DL RMY+RYA  + WK  +L ++    GGYKE++ +I G+ V+S +
Sbjct: 117 RAGAGGEEAALFAADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSIEGKNVYSHL 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+ESGVHRVQRVP TE+ GR+HTS  TVAVLPEA E DV I  +D+RI+T RASG+GGQ+
Sbjct: 177 KYESGVHRVQRVPITESGGRIHTSTITVAVLPEADETDVVINPQDLRIETFRASGAGGQY 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTT+SAVRITHIPTGI +    E+SQ QN+L+AM++L ARL D   K+   E    RK 
Sbjct: 237 VNTTESAVRITHIPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQKKEETDKERKE 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+G+G+RSE+IRTYNFSQ R+TDHRINLTL+KL+ VL G +DDII+ L      + + SA
Sbjct: 297 QVGTGERSEKIRTYNFSQNRVTDHRINLTLHKLQDVLDGDLDDIISSLQAKELEEKLASA 356


>gi|71083224|ref|YP_265943.1| protein release factor class I [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|119361574|sp|Q4FN99|RF1_PELUB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71062337|gb|AAZ21340.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 357

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 174/357 (48%), Positives = 253/357 (70%), Gaps = 3/357 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  K I DL ++ + +E  +S        + + ++EY+ ++ +I     Y   + E++D
Sbjct: 1   MIPLKTIEDLISKHSILEKELSSGEVDKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D NSD+E +++A++E+  ++ E   +E ++   LLPKD  D K+ I+EIRAGTG
Sbjct: 61  LEKILSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  DLF+MYE+ +  +KW++E++S S ++ GG KE++A+I G+ ++S +K+ESG
Sbjct: 121 GLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+D+ I   D+RID  RA G GGQ VNTTD
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG+ V+   +KSQH+N+ + M +LR+RLY++ER R+  ERS +RK +IG+G
Sbjct: 241 SAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGERSEDRKSKIGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTL+KLE  L+G   D+++  L    Q + + + +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEAFLEGEAFDEMVENLTLQAQEEKLSNLN 357


>gi|256820779|ref|YP_003142058.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271]
 gi|315223922|ref|ZP_07865767.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287]
 gi|256582362|gb|ACU93497.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271]
 gi|314946094|gb|EFS98098.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287]
          Length = 357

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 230/354 (64%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+   + +   +     YI+L +EY  +  ++ K   Y       Q+
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDIIADQKRYIQLNKEYKDLKELMDKRDEYINVTGNLQE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+E+ ++A++++   ++ + +LE EI Y+L+PKD +D K+ ++EIRAGTG
Sbjct: 61  AEEIIAD-GSDAEMVEMAKLQLEESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDL+RMY +Y   + W   V+  ++   GGYKEI+  ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV++ + D++I    ++G GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVIVLPEAEEFDVELDMADVKIIRTTSTGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+++ HIPTGI V    EKSQH+N  +A+KVLR+RLY++E  +     SA RK  + SG
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVLRSRLYEMELAKKMEADSARRKSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRS +IRTYN+ QGR+TDHRI LTLY L+ V+ G +  +I+ L  A  A+ +  
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAENAEKLKE 353


>gi|58337080|ref|YP_193665.1| peptide chain release factor 1 [Lactobacillus acidophilus NCFM]
 gi|227903648|ref|ZP_04021453.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
           4796]
 gi|75432974|sp|Q5FKZ0|RF1_LACAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58254397|gb|AAV42634.1| peptide chain release factor I [Lactobacillus acidophilus NCFM]
 gi|227868535|gb|EEJ75956.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
           4796]
          Length = 361

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y + K+E +D   
Sbjct: 7   QLESLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKENKKEIEDNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  + +DS++ ++A+ E   +EKEI ELE++I  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIS-NETDSDLIEMAKEENAELEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + W V ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAERQNWNVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +   +  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAQYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ V+ G +D+II+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELDEIIDALILYNQTKQLEELAD 359


>gi|313905737|ref|ZP_07839097.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6]
 gi|313469444|gb|EFR64786.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6]
          Length = 360

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 161/356 (45%), Positives = 243/356 (68%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ D++ R  EI  ++S+           KL +E A +SP+    + Y + ++   D  
Sbjct: 3   EKLEDVQIRLDEILCQLSDPATAGDSARMQKLMKEQAELSPVAEMYAAYRKNEETISDSL 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD ++R++ + E+   +    + E E+  LLLPKD +DDKS I+EIRAG GG 
Sbjct: 63  ELL-ESESDPDMREMLKEELQEAKANRSKYERELQLLLLPKDPNDDKSVIVEIRAGAGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  +++RMY RYA  ++W+ E++S  +   GG KE    ISG G +S++K+ESGVH
Sbjct: 122 EAALFAYEIYRMYVRYAEKQRWQTELMSIDETGLGGLKECSFEISGSGAYSKLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVPATE+ GR+HTS  TVAV+P+   +I ++IP +D+RID MRASG+GGQ VNTTDS
Sbjct: 182 RVQRVPATESGGRIHTSTITVAVMPKVDDDIQIEIPDKDVRIDVMRASGNGGQCVNTTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH PTGI++ + +EKSQ QN+ +A ++LR++LY +E ++  +  +  R+ QIG+GD
Sbjct: 242 AVRLTHYPTGIVIYSQTEKSQIQNKAKAWELLRSKLYVLEMEKRHDAEADLRRSQIGTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSE+IRTYNF QGR+TDHRI LTL++++ +L G +D++I  L  A QA  +    +
Sbjct: 302 RSEKIRTYNFPQGRVTDHRIKLTLHQIDSILNGDLDELIQTLTAADQAAKLTKMQD 357


>gi|304407781|ref|ZP_07389432.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
 gi|304343264|gb|EFM09107.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
          Length = 358

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 150/356 (42%), Positives = 240/356 (67%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +        +L   ++E +++       + Y Q  ++  D
Sbjct: 1   MLDRLSVLADRYEKLSELLCDPDVAGDPKRLREYSKEQSSLQEAYEAFTEYKQVCEQLDD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++G+   D E+R++ ++E+  +++    L+  I  LLLPKD +DDK+ I+EIR   G
Sbjct: 61  AKLMLGEKLDD-EMREMVKMEIGELDERKTALDERIRILLLPKDPNDDKNVIVEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY +YA  + W+VE++  +++D GG+KE+V  I G+G +S++KFESG
Sbjct: 120 GDEAALFAYDLYRMYNKYADSQGWRVELMDMNESDLGGFKEVVFMIIGKGAYSKLKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+PATE+ GR+HTS +TVAV+PE  E+D++I  +DIRIDT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPATESGGRIHTSTSTVAVMPEIEEVDIEIHDKDIRIDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H+PTGIM      KSQ++N+ +A++VLRAR+Y++ R+    + +  RK ++G+G
Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIYEIHRQEEEAKYAGERKSKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ Q R+TDHRI LTL++L+ ++ G I++I+  L    QA+++   +
Sbjct: 300 DRSERIRTYNYPQSRVTDHRIGLTLHRLDAIMNGDIEEIVQTLTITEQAELLEQEN 355


>gi|168203426|gb|ACA21561.1| protein release factor class I [Candidatus Pelagibacter ubique]
          Length = 356

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 175/356 (49%), Positives = 249/356 (69%), Gaps = 3/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  K I +L N+  ++E  +S        + + ++EY+ ++ II+    Y   + ++ +
Sbjct: 1   MIPQKTIEELINKHMQLEKDLSSDKIDKKLFAEKSKEYSDLNEIIADAKKYLSFENDKTE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D NSD E+  +A+ E+  ++ +  + E ++   LLP+D  D K+ I+EIRAGTG
Sbjct: 61  LKKILEDQNSDEELLKMAETEIKDLQIQFEKNEKKLKLFLLPRDEADKKNAIIEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF GDLF+MYE+ +  +KW VE++S S ++ GG KE++A+I G  ++S +K+ESG
Sbjct: 121 GLEASLFAGDLFKMYEKVSHKKKWLVEIISISKSEAGGLKEVIASIKGTNIYSTLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+D+ I   D+RID  RA G GGQ VNTTD
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDLKINDSDLRIDVFRAGGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG+ V+  + KSQH+N+ + MK+LRARLY++ER R+  ERS +RK +IG+G
Sbjct: 241 SAVRITHIPTGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQERSQDRKSKIGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLT++KLE  L+G   D++I  L    Q + + + 
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTIHKLEEFLEGEAFDEMIESLTLQAQEESLSNL 356


>gi|296271838|ref|YP_003654469.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299]
 gi|296096013|gb|ADG91963.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299]
          Length = 355

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 178/356 (50%), Positives = 250/356 (70%), Gaps = 9/356 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    +R+ EI   ++       +     L++E +AI PI++K   Y     + Q
Sbjct: 1   MLQDKLQLFIDRYEEINGLLASPDISSDIKRMTTLSKEQSAIEPIVNKAKEYISVLNDIQ 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +      D E+ +LA+ E+  +E     +E EI  L++PKD +D+K+  +E+RAG 
Sbjct: 61  DNKLLY----DDPELGELAKEELKDLELRKPTIEEEIKVLMIPKDPNDNKNIFIELRAGA 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA +FVG+LFR Y RYA L+ WKVE+++ S+N+ GGYKEIVA   G  V+SR+K+ES
Sbjct: 117 GGDEAGIFVGNLFRAYLRYAELKGWKVEIMNQSENEAGGYKEIVALFKGEQVYSRLKYES 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVPATE+ GRVHTSA TVAV+PE  +++V+I   D++ID MRASG+GGQ VNTT
Sbjct: 177 GTHRVQRVPATESQGRVHTSAITVAVMPEVDDVEVEIDPGDLKIDVMRASGNGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+G++VT   +KSQH+N+ +AMKVL+ARLYD++ +   +   A+RK Q+G+
Sbjct: 237 DSAVRITHIPSGLVVTNQDQKSQHKNKDKAMKVLKARLYDIQMQEKMDSEGASRKEQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           GDRS RIRTYN+ QGRI+DHRINLTLY+LE V+  G  D+II+PL+T  Q+K I +
Sbjct: 297 GDRSGRIRTYNYPQGRISDHRINLTLYRLEAVMNDGVFDEIIDPLITDAQSKAIEA 352


>gi|19704667|ref|NP_604229.1| peptide chain release factor 1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22096034|sp|Q8R5W0|RF1_FUSNN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|19714975|gb|AAL95528.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 365

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 165/356 (46%), Positives = 241/356 (67%), Gaps = 6/356 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +     +    K+    +    I+ I+ K   Y +   + + + 
Sbjct: 11  DKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEFIK 70

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   DS+++++   E+   E+++ +LE E+  LLLPKD +DDK+ I+EIR G GG 
Sbjct: 71  ESFK-TEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRGGAGGD 129

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DLFRMY RYA  +KWK+E++   D +  G KEI  TI G G +SR+KFESGVH
Sbjct: 130 EAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEIAFTIIGLGAYSRLKFESGVH 189

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TEASGR+HTS ATVAVLPE  +I    +  +D++IDT R+ G+GGQHVN TDS
Sbjct: 190 RVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDTYRSGGAGGQHVNMTDS 249

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ +NR +AMK L  +LY++E+++  +E  + R+LQ+G+GD
Sbjct: 250 AVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTGD 309

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+E+IRTYNF  GRITDHRI LT+++LE  L G ID++I+ L+T HQA+++ ++ +
Sbjct: 310 RAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ 365


>gi|221195206|ref|ZP_03568262.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
 gi|221185109|gb|EEE17500.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
          Length = 355

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 162/357 (45%), Positives = 231/357 (64%), Gaps = 9/357 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  + + +A++E ++++   V     Y ++ +E+A  + ++     Y     + + 
Sbjct: 1   MRDKLEKILSAYADLEKKLADPAVVSDPKEYARIAKEHADQAELVELSRSYIDALDDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++   +SD+E +++ Q ++   E ++ ELE+EI   L+P D +D+K  I+EIRAG G
Sbjct: 61  AKELLS-GSSDAEEKEMLQADISENEAKLPELEDEIKIKLIPGDPNDEKDTIVEIRAGVG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDLF+MYER+A  R WKV+VLSSS ++ GG+K I   ++G  V+S MKFESG
Sbjct: 120 GDEAAIFAGDLFKMYERFAESRGWKVQVLSSSPSEAGGFKTIEFKVTGEKVYSVMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+ TS ATVAVLPEA +ID+ I  ED+RIDT  ASG GGQ VNTT 
Sbjct: 180 VHRVQRVPKTESQGRIQTSTATVAVLPEADDIDIQINQEDLRIDTYCASGPGGQGVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY+ E +R   E+ A+R  QIG G
Sbjct: 240 SAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEQELERQQAEQGADRLSQIGHG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
            RSE+IRTYN  Q R+TDHRI     Y    VL G  +  +I  L  A +A+ +  A
Sbjct: 300 ARSEKIRTYNQPQDRVTDHRIGFNGTYN--GVLLGDTLPSVIESLAAAERAEKLAQA 354


>gi|302392966|ref|YP_003828786.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
           arabaticum DSM 5501]
 gi|302205043|gb|ADL13721.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
           arabaticum DSM 5501]
          Length = 359

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 251/354 (70%), Gaps = 5/354 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            + + D + R+ +++  +S+   ++    + KL++E+A +  ++ K   Y +   E ++ 
Sbjct: 5   KEALDDAEARYEKLQKMLSDPEVINNQSKFQKLSKEHAELKKLVKKYRKYKEIMAEIEEA 64

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              + +   D E  +LA++E+  +E +  +LE E+  +L+P+D +D+K+ I+EIRAGTGG
Sbjct: 65  KE-LLEMEDDEEAVELAKMELAELEPKQEKLEEELPLMLIPEDPNDEKNVIVEIRAGTGG 123

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF G+L+RMY RYA  + W V+++SSS ++ GG+KE++  + G+G +SR+K+ESGV
Sbjct: 124 DEAALFAGELYRMYSRYAEKQDWDVDIMSSSSSEVGGFKEMIFVVEGKGAYSRLKYESGV 183

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+SGR+HTS ATVAVLPEA ++D++I   D+ I+T R+SG GGQ VNTTDS
Sbjct: 184 HRVQRVPETESSGRIHTSTATVAVLPEAEDVDIEINQNDLTIETYRSSGPGGQSVNTTDS 243

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH PTG++V    EKSQH+N+ +AM+VLR+R+ +        E +  RK+QIGSG 
Sbjct: 244 AVRITHEPTGVVVSCQDEKSQHKNKRKAMRVLRSRIQEKIEAEKQAEEAEKRKMQIGSGG 303

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           RSERIRTYNF QGRITDHRINLT +++E +L G ID++++ L+TA Q + +   
Sbjct: 304 RSERIRTYNFPQGRITDHRINLTTHQMESILDGEIDELVDELVTADQTEKLEQM 357


>gi|42560702|ref|NP_975153.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|61214633|sp|Q6MU89|RF1_MYCMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42492198|emb|CAE76795.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|301320433|gb|ADK69076.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 364

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 153/355 (43%), Positives = 231/355 (65%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  ++ R  +I   + +      +  + +L +E + +  ++ K   Y +  +  +D  
Sbjct: 7   EALETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKKAVEHIKDAK 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ ++  D E+ +LA+IE+     ++  L+  I  +LLPKD +DDK+ I+EIR   GG 
Sbjct: 67  AIL-ENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDL RMY+ YA  + WK+ +L +S  + GGY ++V  I G  V+S++KFESG H
Sbjct: 126 EANIFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+ TS ATVAVLPE +E++++I   D+RIDT RASG+GGQHVNTTDSA
Sbjct: 186 RVQRVPKTEAKGRIQTSTATVAVLPEMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V +   +SQH N+  AM +LR ++Y+ E ++   +  A RK  +G+G R
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRTKVYEAEVEKQQAQADATRKNAVGTGAR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+ Q R+TDHR+ LTL KL+ V++G ID+ I  L+   Q + +    E
Sbjct: 306 SEKIRTYNYPQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQRQKVAEQLE 360


>gi|325281736|ref|YP_004254278.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712]
 gi|324313545|gb|ADY34098.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712]
          Length = 368

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 151/362 (41%), Positives = 226/362 (62%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++     RF EI   +++   +     Y++LT+EY  +  I      +       ++  
Sbjct: 7   EKLETYYIRFKEIGQLITDPEVIQDMERYVRLTKEYKELETITRTADKFKAALLSVEESK 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++  H  D E+R++A++E+  +E ++  +E E+  LL+P D DD K+ ILEIR GTGG 
Sbjct: 67  DIL-LHEEDKELREMAEMEIEELEDKLPGMEQELKLLLVPADPDDSKNVILEIRGGTGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF GDLFRMY ++   + WKVEV ++++   GGYKEIVA+++G+GV+  MK+ESGVH
Sbjct: 126 EACLFAGDLFRMYAKFCERKGWKVEVTNANEGTAGGYKEIVASVTGKGVYGIMKYESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAATVAVLPEA   +V+I    I+ DT R+ G+GGQ+VN  +S 
Sbjct: 186 RVQRVPATETQGRVHTSAATVAVLPEAEAFEVEINEGAIKWDTFRSGGAGGQNVNKVESG 245

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR+ ++            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ SA RK
Sbjct: 246 VRLRYVWQNPNTGVAEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDISAKRK 305

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ QGR+TDHRIN TLY L+ V+ G ID+II  L      + +  
Sbjct: 306 TMVSTGDRSAKIRTYNYPQGRVTDHRINFTLYNLQAVMDGEIDEIIEKLQIEENTERLKE 365

Query: 355 AS 356
           + 
Sbjct: 366 SG 367


>gi|331703153|ref|YP_004399840.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801708|emb|CBW53861.1| Peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 364

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 232/355 (65%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  ++ R  +I   + +      +  + +L +E + +  ++ K   Y Q  +  +D  
Sbjct: 7   EALETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAK 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ ++  D E+ +LA+IE+     ++  L+  I  +LLPKD +DDK+ I+EIR   GG 
Sbjct: 67  AIL-ENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDL RMY+ YA  + WK+ +L +S  + GGY ++V  I G  V+S++KFESG H
Sbjct: 126 EANIFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+ TS ATVAVLPE +E++++I   D+RIDT RASG+GGQHVNTTDSA
Sbjct: 186 RVQRVPKTEAKGRIQTSTATVAVLPEMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V +   +SQH N+  AM +LRA++Y+ E ++   +  A RK  +G+G R
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGAR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+ Q R+TDHR+ LTL KL+ V++G ID+ I  L+   Q + +    E
Sbjct: 306 SEKIRTYNYPQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQRQKVAEQLE 360


>gi|148984974|ref|ZP_01818217.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71]
 gi|147922672|gb|EDK73789.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71]
          Length = 354

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 157/350 (44%), Positives = 231/350 (66%), Gaps = 4/350 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
              + Q+  +++R+ E+   +S+   V     +++L++E A+    +     Y Q  Q  
Sbjct: 1   MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D   +I +   D+++ +LA+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR  
Sbjct: 61  VDAEEMIKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGA 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+E
Sbjct: 121 AGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN 
Sbjct: 181 SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
             +AVRI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +GDRSERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q
Sbjct: 301 TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|261416348|ref|YP_003250031.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372804|gb|ACX75549.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 355

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 160/352 (45%), Positives = 225/352 (63%), Gaps = 6/352 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQD 61
              +   L  ++ E+E  +     +    +  + +     I   + K   Y Q   +  +
Sbjct: 1   MKDKAKKLIEKYEELESELGNPDVLGDQARYNKIHKQYKGIEKAVLKAKEYLQMMDDLDE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               +GD  SD E+  +A+ E+  IEK++ E+ +E+  L++PKD  D ++  LEIR GTG
Sbjct: 61  YKAALGD--SDPEMVAMAKAEISEIEKKLPEVTDELQILMVPKDPWDYRNATLEIRGGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E+ALF GDLFRMY  Y     WK+ +   S+   GGYKEI   I G  V+  +KFESG
Sbjct: 119 GDESALFAGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFIEGDSVYGTLKFESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVA+LPEA E+DV+I   DI +DT R+SG+GGQ++N TD
Sbjct: 179 VHRVQRVPETETQGRVHTSAATVAILPEAEEVDVEIREADIHMDTYRSSGAGGQYINKTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++V   +E+SQ QNRL AM++LR+++ D    +   E +ANRK  +G+G
Sbjct: 239 SAVRLTHIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKKEKEEAANRKALVGTG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           DRS +IRTYN+ Q R+TDHRI LT+Y L+ V+ G +D+IIN L  A+  + +
Sbjct: 299 DRSAKIRTYNYPQNRVTDHRIGLTVYNLDKVVTGDLDEIINGLQMANAQEKL 350


>gi|149195429|ref|ZP_01872512.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2]
 gi|149134434|gb|EDM22927.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2]
          Length = 355

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 170/358 (47%), Positives = 248/358 (69%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++     ++ EI  ++S       +    KL+ E  ++  I++K   Y++     +
Sbjct: 1   MLLEKLKPFVEKYNEINQKLSSPEITKDIKQMTKLSREARSLEEIVNKAKEYEELLNNLE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++     D+E+ +LA+ E+  IE+++ +LE EI  LLLPKD +DDK+  LEIRAGT
Sbjct: 61  EAKMML----DDAEMSELAKEEIKEIEEKLPKLEEEIKLLLLPKDPNDDKNIFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFVGDL + Y RYA  + WKVE++S S ND GGYKEI+  I G G +SR+K+E 
Sbjct: 117 GGDEAALFVGDLMKAYLRYADNKGWKVEIVSESKNDIGGYKEIILLIKGEGAYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQR+PATE+ GR+HTSA TVAV+PE  ++D+++  +DI+I+ MRA G+GGQHVN T
Sbjct: 177 GTHRVQRIPATESQGRIHTSAVTVAVMPEVDDVDIELDPKDIKIEVMRAGGAGGQHVNKT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVR+THIPTGI V+   E+SQ +N+ +A+++L+AR+Y+   K    +    RK Q+GS
Sbjct: 237 ESAVRMTHIPTGITVSMQDERSQQRNKEKALQILKARVYEKLEKERLEKIGKERKSQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ Q RITDHRI LTLY+LE ++ +G  D+II+PL+  +QA+ +  A 
Sbjct: 297 GDRSERIRTYNYPQNRITDHRIGLTLYRLEQIMNEGLFDEIIDPLIAHYQAEALKEAG 354


>gi|256384120|gb|ACU78690.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256384952|gb|ACU79521.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455380|gb|ADH21615.1| peptide chain release factor 1 [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 364

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 232/355 (65%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  ++ R  +I   + +      +  + +L +E + +  ++ K   Y Q  +  +D  
Sbjct: 7   EALETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAK 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ ++  D E+ +LA+IE+     ++  L+  I  +LLPKD +DDK+ I+EIR   GG 
Sbjct: 67  VIL-ENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDL RMY+ YA  + WK+ +L +S  + GGY ++V  I G  V+S++KFESG H
Sbjct: 126 EANIFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+ TS ATVAVLPE +E++++I   D+RIDT RASG+GGQHVNTTDSA
Sbjct: 186 RVQRVPKTEAKGRIQTSTATVAVLPEMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V +   +SQH N+  AM +LRA++Y+ E ++   +  A RK  +G+G R
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGAR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+ Q R+TDHR+ LTL KL+ V++G ID+ I  L+   Q + +    E
Sbjct: 306 SEKIRTYNYPQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQRQKVAEQLE 360


>gi|209965909|ref|YP_002298824.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
 gi|209959375|gb|ACJ00012.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
          Length = 360

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 177/344 (51%), Positives = 249/344 (72%), Gaps = 5/344 (1%)

Query: 15  RFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
           R+ E+  +++        +++ ++EYA + P+ + I+   + + +  DL  +      D+
Sbjct: 18  RYDELRDQLASGTLSGEVFVRSSQEYAELEPVATAIAELRRARADMADLQAMA--EGDDA 75

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           E+  LA+ E++  ++ I ELE  I   LLPKD  D+K+ ILE+RAGTGG EAALF  +LF
Sbjct: 76  EMATLARDELVEADRRIPELERRIMLALLPKDEADEKNAILEVRAGTGGDEAALFAAELF 135

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
            MY RYA ++ W+ E +  ++   GGYKE  A+I+GR VF R+KFESGVHRVQRVP TEA
Sbjct: 136 EMYRRYAGIQGWRFETIEVNETGLGGYKEASASITGRNVFRRLKFESGVHRVQRVPETEA 195

Query: 194 SGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            GR+HTSAATVAVLPEA E+D+ I  +D+RID  R+ GSGGQ VNTTDSAVRITH+PT I
Sbjct: 196 GGRIHTSAATVAVLPEAEEVDIHIEEKDLRIDVFRSQGSGGQSVNTTDSAVRITHLPTNI 255

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFS 312
           +V    EKSQH+N+ +A+KVLRARLY++ER+R  +ER+A+R+ Q+GSGDRSERIRTYNF 
Sbjct: 256 VVQCQDEKSQHKNKAKALKVLRARLYEIERQRRDSERAASRRTQVGSGDRSERIRTYNFP 315

Query: 313 QGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           QGR+TDHRINLTLYK++ V+ G  +D++++ L+ + +A+ +   
Sbjct: 316 QGRVTDHRINLTLYKIDKVMAGEALDELVDALVASDEAERLAEL 359


>gi|163789460|ref|ZP_02183899.1| peptide chain release factor 1 [Carnobacterium sp. AT7]
 gi|159875314|gb|EDP69379.1| peptide chain release factor 1 [Carnobacterium sp. AT7]
          Length = 358

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 165/353 (46%), Positives = 238/353 (67%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++ R+ E+   +S+   V       KLT+E AAI   ++    Y + +Q+  D  
Sbjct: 3   DRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVEQDISDTE 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   DSE+ ++A+ E+  ++KE  E+E ++  L+LPKD +DD++ I+EIR   GG 
Sbjct: 63  DMLGEK-LDSEMAEMAKEELNDLKKEKTEIEEKMKVLMLPKDENDDRNIIMEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF G LF MY++YA  + WK EVL ++    GGYKEI   I+G  V+S++K+E+G H
Sbjct: 122 EAQLFAGTLFNMYQKYADAQGWKTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GR+HTS ATV V+PEA E+++D+P +DIR D   ASG+GGQHVN T SA
Sbjct: 182 RVQRVPSTESQGRIHTSTATVVVMPEAEEVELDLPDKDIRTDIYHASGAGGQHVNKTASA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI V    E+SQ +NR +AMKVLRAR+YD  ++   +E  A RK  IG+GDR
Sbjct: 242 VRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHIQQAAQSEYDAERKSAIGTGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYN+ Q R+TDHRI LT+ KL+ +L G +D+II+ L+   Q   +   
Sbjct: 302 SERIRTYNYPQSRVTDHRIGLTIQKLDQILSGKLDEIIDALVLNEQTAKMEQL 354


>gi|194332966|ref|YP_002014826.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271]
 gi|238693294|sp|B4S385|RF1_PROA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194310784|gb|ACF45179.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271]
          Length = 357

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 160/358 (44%), Positives = 226/358 (63%), Gaps = 6/358 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++   K+ +  +E ++S+   +     + KL +EY+ +  I+     Y   +++ ++
Sbjct: 1   MLNKLESAKDHYIRLEEQLSDPDIIGDQQRFRKLNKEYSDLKEIVQAYDRYISNRRQIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +  ++    SD E++ LA+ E   +  +  ELE ++  LLLPKD  D ++ I+EIRAGTG
Sbjct: 61  VLGMLA-KESDPEMKALAEEEYNELLADQPELEQQLKLLLLPKDEADSRNVIMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG-YKEIVATISGRGVFSRMKFES 180
           G EAALF  DL RMY+R+A  R WK E+L  ++ +  G  KE    ISG  V+  MKFES
Sbjct: 120 GDEAALFATDLLRMYQRFAERRGWKCELLEFNEANTPGACKEASMAISGHDVYGIMKFES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GR+HTSAA+VAVLPEA E+D++I  +D+R+DT R+ G GGQ+VN  
Sbjct: 180 GVHRVQRVPETETQGRIHTSAASVAVLPEAEEVDIEIRKDDLRVDTFRSGGKGGQNVNKV 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AVRITH P+GI+V    E+SQ QNR RAMK+LRA+LYD E      ER+  RK  + S
Sbjct: 240 ETAVRITHAPSGIVVACQEERSQLQNRERAMKMLRAKLYDRELADKNKERADLRKSMVSS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRS +IRTYNF Q R+TDHRI  T + L  +L G +DD+I  L    Q   +    +
Sbjct: 300 GDRSAKIRTYNFPQSRVTDHRIGYTSHALPQILDGNLDDLIEALKLYEQTARLQEQQQ 357


>gi|323466867|gb|ADX70554.1| Peptide chain release factor 1 [Lactobacillus helveticus H10]
          Length = 362

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y + K+E  D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIADNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  + +DS++ ++A+ E   IEKEI ELE++I  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIA-NETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +   +  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LT+ KL+ V+ G +D+II+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359


>gi|227877271|ref|ZP_03995344.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
 gi|256842834|ref|ZP_05548322.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
 gi|256848802|ref|ZP_05554236.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
 gi|262045800|ref|ZP_06018764.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
 gi|293381669|ref|ZP_06627650.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
 gi|295692623|ref|YP_003601233.1| peptide chain release factor 1 [Lactobacillus crispatus ST1]
 gi|312977646|ref|ZP_07789393.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
 gi|227863127|gb|EEJ70573.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
 gi|256614254|gb|EEU19455.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
 gi|256714341|gb|EEU29328.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
 gi|260573759|gb|EEX30315.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
 gi|290921716|gb|EFD98737.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
 gi|295030729|emb|CBL50208.1| Peptide chain release factor 1 [Lactobacillus crispatus ST1]
 gi|310895385|gb|EFQ44452.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
          Length = 362

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y + K+E +D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIEDNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I    +D ++ ++A+ E   IEKEI ELE++I  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIS-SETDPDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +   +  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAQYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LT+ KL+ V+ G +D+II+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359


>gi|295134987|ref|YP_003585663.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87]
 gi|294983002|gb|ADF53467.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87]
          Length = 358

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 154/357 (43%), Positives = 230/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K RF E+   + +   +     Y++L +EY  +  ++++   Y +     ++
Sbjct: 1   MLEKLNIVKQRFDEVNDLIIQPDIIADQKRYVELNKEYKDLRALMNERERYIELTDNLKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD E+ ++A+++    ++E+  LE +I  +L+PKD +D K+ ++EIRAGTG
Sbjct: 61  AEEIISD-GSDPEMTEMAKLQQEEAKQELPALEEKIRMMLVPKDPEDAKNVVMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDL+RMY +Y   + W   ++  S+   GG+KE++  +SG  V+  MKFE+G
Sbjct: 120 GDEASIFAGDLYRMYTKYVESKGWSHNIVDFSEGTSGGFKEMIFEVSGEDVYGTMKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV+I  +D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVEIDPKDVRIDYFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTG++     +KSQH+NR +A +VLR+RLY++E  +     +A R   + SG
Sbjct: 240 SAVRLTHEPTGLVAQCQDQKSQHKNREKAFRVLRSRLYEIELAKKMEADAAKRNSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+ QGR+TDHRINLTLY L  ++ G I  II+ L      + +   S+
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRINLTLYDLSNIVNGDIQKIIDELRLVENTEKLKENSD 356


>gi|319945454|ref|ZP_08019714.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
 gi|319741240|gb|EFV93667.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 160/362 (44%), Positives = 232/362 (64%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+  ++NR  E+  +++            KL +E+A  S ++   +++ Q   
Sbjct: 1   MKESLRAQLDRMQNRLEELNAQLASEDIGKDISLLKKLNQEHAETSEVLDTYALWKQAGA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  + +      +        ++     +E    YLLLP+D DD ++ ILEIR
Sbjct: 61  DLEAARQMREEPDMREFADEEIADAETRLQATQERIE----YLLLPRDPDDARNAILEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYA  R W+ E+LS+S+++ GGY+E++  +SG+ V+ R++
Sbjct: 117 AGTGGDESALFAGDLLRMYLRYAEHRGWQTEILSASESELGGYREVIVQVSGQQVYGRLR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           +ESG HRVQRVP TE+ GR+HTSA TVAV+       D++I  +D+RID  RASG+GGQH
Sbjct: 177 YESGAHRVQRVPVTESQGRIHTSACTVAVMAEAEPTGDIEISPDDLRIDVFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SAVRITH+PTGI+     ++SQH+NR +AM VL  RL D   +  A E SA+RK 
Sbjct: 237 VNKTESAVRITHLPTGIVAECQDDRSQHRNRDKAMTVLLTRLRDARERERAAETSAHRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ ++ G +D++ + L+ A  A++    
Sbjct: 297 LVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLQTIIDGDLDELTDALMKARLAELAAER 356

Query: 356 SE 357
           +E
Sbjct: 357 AE 358


>gi|315638047|ref|ZP_07893232.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21]
 gi|315481895|gb|EFU72514.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21]
          Length = 355

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 167/357 (46%), Positives = 244/357 (68%), Gaps = 9/357 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++     R+ E+   +S++  ++   K   L++E   + PI+ K   Y     + +
Sbjct: 1   MLAEKLQPFLKRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++    +D E  +LA+ E+  +E+     E EI  LLLPKD +D+K+  LEIRAGT
Sbjct: 61  DNKALL----NDPEFSELAKEELKNLEEAKINFEEEIKILLLPKDPNDEKNIFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+LFVGDL + Y RYA LR +K+E++SSS+   GG+KE++  + G G +SR+KFES
Sbjct: 117 GGDEASLFVGDLVKAYARYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFES 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQR+P TE+ GR+HTSA TVA++PE  +I++ I   D++ID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRIPQTESQGRIHTSAITVAIMPEVDDIEIQINPNDLKIDVMRSSGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+G++V     KSQH+N+  AMK+L+ARLY+++      + S  RK Q+GS
Sbjct: 237 DSAVRITHIPSGLVVVNQDGKSQHKNKESAMKILKARLYEMQESERLAKESEARKSQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSA 355
           GDRSERIRTYNF Q RI+DHRINLTLY+L+ +++G + D++I PL+  HQ++ +   
Sbjct: 297 GDRSERIRTYNFPQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIAHHQSEGLKEQ 353


>gi|94264416|ref|ZP_01288206.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
 gi|93455173|gb|EAT05391.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
          Length = 354

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 173/353 (49%), Positives = 245/353 (69%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+ D+  R  ++E R+++         Y  L +E++ +S +    + Y +   + +   
Sbjct: 3   EQLADIAERKRDLEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEANG 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D EI +LA+ E   + + + +L+ E+   L+P D +D+K+ +LEIRAGTGG 
Sbjct: 63  QLLQEE-DDPEILELARQEGEELRQRLAQLDKELRLALVPPDPNDEKNILLEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LFV +LFRMY RYA    WKVEVLSSS  + GGYKEI+A ISG  VFSR+K+ESGVH
Sbjct: 122 EASLFVANLFRMYSRYAEQLGWKVEVLSSSATEVGGYKEIIALISGDHVFSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTSA TVAVLPEA E+++ I   +++ D  R+SG GGQ VNTTDSA
Sbjct: 182 RVQRVPETETQGRVHTSAVTVAVLPEAEEVELTINPAELKYDVFRSSGPGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQH+N+ +A++VLRARL D  +++  ++ S++RK Q+GSGDR
Sbjct: 242 VRVTHLPTGLVVICQDEKSQHKNKAKALQVLRARLLDQMQQQQHDQMSSDRKSQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRINLT Y+LE V+ G +D++I PL+  +Q   +   
Sbjct: 302 SERIRTYNFPQNRLTDHRINLTSYRLEDVMLGRLDEVIEPLMLHYQTAALKQQ 354


>gi|83319336|ref|YP_424135.1| peptide chain release factor 1 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|90110051|sp|P71496|RF1_MYCCT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83283222|gb|ABC01154.1| peptide chain release factor 1 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 363

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 232/353 (65%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  ++ R  +I+  + +      +  + +L +E A +  ++ K   Y +     +D  
Sbjct: 7   EALETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAK 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ ++  DSE+ +LA+IE+     ++  L+  I  +LLPKD +D+K+ I+EIR   GG 
Sbjct: 67  AIL-ENEKDSELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIIEIRGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDL RMY+ YA  + WK+ +L +S  + GGY ++V  I G  V+S++KFESG H
Sbjct: 126 EANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+ TS ATVAVLPE +E++++I   D+RIDT RASG+GGQHVNTTDSA
Sbjct: 186 RVQRVPKTEAKGRIQTSTATVAVLPEMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V +   +SQH N+  AM +LRA++Y+ E ++   +  A RK  +G+G R
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGAR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SE+IRTYN+ Q R+TDHR+ LTL KL+ V++G ID+ I  L+   Q + +   
Sbjct: 306 SEKIRTYNYPQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQRQKVAEQ 358


>gi|257452575|ref|ZP_05617874.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|257466434|ref|ZP_05630745.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917590|ref|ZP_07913830.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317059115|ref|ZP_07923600.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|313684791|gb|EFS21626.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|313691465|gb|EFS28300.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 359

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 164/357 (45%), Positives = 243/357 (68%), Gaps = 7/357 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +S    ++   K+    +   A++P+I K   Y   K + + + 
Sbjct: 3   DKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKDDVEFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +     D ++R + Q E+   E+++ ELE E+  LLLPKD +DD + I+EIR G GG 
Sbjct: 63  ESLK-TEKDEDMRSMMQEELKENEEQMPELEKELKILLLPKDPNDDNNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDND-DGGYKEIVATISGRGVFSRMKFESGV 182
           EAA+F GDLFRMY RYA  +KWK+E++   D +   G KE+  +I G G +S++KFESGV
Sbjct: 122 EAAIFAGDLFRMYCRYAERKKWKIEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTD 241
           HRVQRVP TE++GR+HTS ATVAVLPE  +I    I  +D++IDT R+ G+GGQHVN TD
Sbjct: 182 HRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVHIDPKDLKIDTYRSGGAGGQHVNMTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    E+SQ +NR +AMK L ++L ++E ++  +E    R+LQ+G+G
Sbjct: 242 SAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEVEKQRSEIEGERRLQVGTG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DR+E+IRTYNF QGRITDHRI LT+++LE  L G +D++I+ L+T  QA+M+ ++ E
Sbjct: 302 DRAEKIRTYNFPQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQAEMLSASGE 358


>gi|283953774|ref|ZP_06371305.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           414]
 gi|283794815|gb|EFC33553.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           414]
          Length = 355

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 175/354 (49%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  +    K   L++E   + PI+ K   Y +  +  ++   
Sbjct: 5   KLDPFLKRFEELNSLLSNSDILSDISKMTTLSKEQKNLEPIVLKAKEYLKTLENIEENKA 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+ +LA+ E+  +E+   +LE EI  LLLPKD +D+K+  LEIRAGTGG E
Sbjct: 65  LL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDEKNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G +SR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSMGGFKEIIMLVKGTGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAV+PE  +I+++I   D+++D MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ ++  G  D+II PL+T HQA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQTLQEQN 354


>gi|302327519|gb|ADL26720.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 358

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 160/352 (45%), Positives = 225/352 (63%), Gaps = 6/352 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQD 61
              +   L  ++ E+E  +     +    +  + +     I   + K   Y Q   +  +
Sbjct: 4   MKDKAKKLIEKYEELESELGNPDVLGDQARYNKIHKQYKGIEKAVLKAKEYLQMMDDLDE 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               +GD  SD E+  +A+ E+  IEK++ E+ +E+  L++PKD  D ++  LEIR GTG
Sbjct: 64  YKAALGD--SDPEMVAMAKAEISEIEKKLPEVTDELQILMVPKDPWDYRNATLEIRGGTG 121

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G E+ALF GDLFRMY  Y     WK+ +   S+   GGYKEI   I G  V+  +KFESG
Sbjct: 122 GDESALFAGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFIEGDSVYGTLKFESG 181

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVA+LPEA E+DV+I   DI +DT R+SG+GGQ++N TD
Sbjct: 182 VHRVQRVPETETQGRVHTSAATVAILPEAEEVDVEIREADIHMDTYRSSGAGGQYINKTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++V   +E+SQ QNRL AM++LR+++ D    +   E +ANRK  +G+G
Sbjct: 242 SAVRLTHIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKKEKEEAANRKALVGTG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           DRS +IRTYN+ Q R+TDHRI LT+Y L+ V+ G +D+IIN L  A+  + +
Sbjct: 302 DRSAKIRTYNYPQNRVTDHRIGLTVYNLDKVVTGDLDEIINGLQMANAQEKL 353


>gi|161507266|ref|YP_001577220.1| peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
 gi|260102570|ref|ZP_05752807.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
           20075]
 gi|172048215|sp|A8YUJ1|RF1_LACH4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160348255|gb|ABX26929.1| Peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
 gi|260083597|gb|EEW67717.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
           20075]
          Length = 362

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y + K+E  D   
Sbjct: 7   QLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIADNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  + +DS++ ++A+ E   IEKEI ELE++I  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIA-NETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+DI  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +   +  A RK  IG+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAIGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LT+ KL+ V+ G +D+II+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359


>gi|289663473|ref|ZP_06485054.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667596|ref|ZP_06488671.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 361

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 170/363 (46%), Positives = 245/363 (67%), Gaps = 10/363 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E++  +S+   V   D +  L+ E + + P+   +    + K 
Sbjct: 1   MTPTLRRKLEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDETRAKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +     SD E+R+LA+ E+ A +  + EL+ ++  LL+P+D  DD +  LE+R
Sbjct: 61  DLAAAEAM----RSDPEMRELAEEEIAAAQARLEELDAQLALLLVPRDPRDDGNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  + WKVE+ S S  + GGYKE+VA + GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GR+HTSAATVA++PEA +++  +    D+++DT R+SG+GGQH
Sbjct: 177 FESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+RITH+P+G++V   +E+SQH NR +AMK L+A+L + ER + A   +  RKL
Sbjct: 237 VNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLAEAERSKAAAAEAQTRKL 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Q+GSGDRS+RIRTY+F QGRITDHR+  LTLY L  +++G +D +I  LL  HQA  +  
Sbjct: 297 QVGSGDRSQRIRTYSFPQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQADELAR 356

Query: 355 ASE 357
            S+
Sbjct: 357 LSD 359


>gi|301165960|emb|CBW25534.1| peptide chain release factor 1 [Bacteriovorax marinus SJ]
          Length = 357

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 149/359 (41%), Positives = 236/359 (65%), Gaps = 6/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
                ++  +  RF  +  ++++    D    + K++ E + +  ++     Y Q K++ 
Sbjct: 1   MSMFDKLDAVIERFETLTEKLADPTIYDRQDEFKKISSERSNLEEVVVAYKEYRQMKEDI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   ++  +  D +++++A+  +   E +I E+E  +  LLLPKD  DDK+ ++EIRAG
Sbjct: 61  DEAKEILK-NEKDEDMKEMAKEVIAENEPQIPEMEERLTILLLPKDPLDDKNVMMEIRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA++FVGD++RMY  Y     +KVE +S S+ D+ G KEI+ ++SG  V+S++K+E
Sbjct: 120 AGGDEASIFVGDVYRMYSNYFRDLGFKVEQVSISEGDE-GIKEIIFSVSGEKVYSKLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GRVHTS  TVAV+PE  +++ D+ + D+RID  R+ G+GGQ VNT
Sbjct: 179 SGVHRVQRVPKTESQGRVHTSTITVAVMPETDDVEFDLDMNDVRIDVYRSGGAGGQSVNT 238

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+THIPTG +V    +KSQ +N+ +A+++L+ R+YD   +      +A RK  +G
Sbjct: 239 TDSAVRVTHIPTGTVVANQDQKSQLKNKEKALRILKNRIYDKMLQEKNAAEAAERKGLVG 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +GDRSERIRTYNF QGR+TDHRI LTLY L+ +++G +  + + L+  +QA+++    E
Sbjct: 299 TGDRSERIRTYNFPQGRLTDHRIGLTLYSLDKIIEGDMTPVTDALIAHNQAELLKGQEE 357


>gi|94271210|ref|ZP_01291905.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
 gi|93450530|gb|EAT01680.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
          Length = 354

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 173/353 (49%), Positives = 245/353 (69%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+ D+  R  ++E R+++         Y  L +E++ +S +    + Y +   + +   
Sbjct: 3   EQLADIAERKRDLEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEANG 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D EI +LA+ E   + + + +L+ E+   L+P D +D+K+ +LEIRAGTGG 
Sbjct: 63  QLLQEE-DDPEILELARQEGEELRQRLAQLDKELRLALVPPDPNDEKNILLEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LFV +LFRMY RYA    WKVEVLSSS  + GGYKEI+A ISG  VFSR+K+ESGVH
Sbjct: 122 EASLFVANLFRMYSRYAEQLGWKVEVLSSSTTEVGGYKEIIALISGDHVFSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTSA TVAVLPEA E+++ I   +++ D  R+SG GGQ VNTTDSA
Sbjct: 182 RVQRVPETETQGRVHTSAVTVAVLPEAEEVELSINPAELKYDVFRSSGPGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQH+N+ +A++VLRARL D  +++  ++ S++RK Q+GSGDR
Sbjct: 242 VRVTHLPTGLVVICQDEKSQHKNKAKALQVLRARLLDQMQQQQHDQMSSDRKSQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SERIRTYNF Q R+TDHRINLT Y+LE V+ G +D++I PL+  +Q   +   
Sbjct: 302 SERIRTYNFPQNRLTDHRINLTSYRLEDVMLGRLDEVIEPLMLHYQTAALKQQ 354


>gi|222109995|ref|YP_002552259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
 gi|254790879|sp|B9ME05|RF1_DIAST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221729439|gb|ACM32259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
          Length = 367

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 166/369 (44%), Positives = 239/369 (64%), Gaps = 17/369 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S    +     Y  ++ E+A ++ +  + + Y Q++ 
Sbjct: 1   MKPFLRSQLERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ ++AQ E+ A E E+ +LE+E+  LLLPKD DD+++  +EIR
Sbjct: 61  DLAGAREMLE----DPDMAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------ 171
           AGTGG E+ALF GDL RMY RYAA   WKVEV+S+++++ GGYKE+V  I G+       
Sbjct: 117 AGTGGDESALFAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQPGTGPSG 176

Query: 172 --VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMR 228
             V+  +KFESG HRVQRVPATE  GR+HTSA TVAV+PE  E         D+RIDT R
Sbjct: 177 SGVYGALKFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFR 236

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG+GGQH+N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A 
Sbjct: 237 ASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAA 296

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + +A RK  IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  +++G + +++  L  A 
Sbjct: 297 KEAALRKGLIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 356

Query: 348 QAKMIGSAS 356
           +A+++    
Sbjct: 357 EAELLAELG 365


>gi|118602715|ref|YP_903930.1| peptide chain release factor 1 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166223599|sp|A1AX02|RF1_RUTMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118567654|gb|ABL02459.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 363

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 247/355 (69%), Gaps = 7/355 (1%)

Query: 8   QICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E+++ +S       V  + KL+ E A ++P+  +   Y    +  +D   
Sbjct: 8   KLEQLSMRLEEVDVMLSNPKVASDVKKFTKLSIERAQLTPVNQQFQAYLSHHRNLEDAKL 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D +I+ +A+ E+L ++K++  L  E+   LLPKD +D ++ I+EIRAGTGG+E
Sbjct: 68  MLLE--DDMDIKAMAKEEMLDVKKKLDHLYLELKKSLLPKDPNDSRNIIIEIRAGTGGNE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A++F  +LF+MY RY   +KW++EV+SSS  + GG+KEI+A ISG GV+S++KFESG HR
Sbjct: 126 ASIFSSNLFKMYSRYTEKKKWQIEVISSSLGEHGGFKEIIARISGVGVYSKLKFESGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GRVHTSA T+A++PE   I+  +I + D+R+DT RASG+GGQHVN T+SA
Sbjct: 186 VQRVPETESQGRVHTSACTIAIMPEVENIEEVNINMSDVRVDTFRASGAGGQHVNKTNSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG +      +SQH+N+ +A+ VL +R++D++++    E+++ RK  IGSGDR
Sbjct: 246 VRITHIPTGTVAECQDGRSQHKNKAQALLVLASRIFDLQQQEQHKEQASTRKELIGSGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYN+ QGRITDHRINLTLYKL  +++G ++ II PL+   Q   +   ++
Sbjct: 306 SQRIRTYNYPQGRITDHRINLTLYKLSEIMEGNLNAIIEPLIVEQQTSQLTELND 360


>gi|295425486|ref|ZP_06818179.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM
           11664]
 gi|295064825|gb|EFG55740.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM
           11664]
          Length = 362

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 243/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  M++   ++    Y+++++E A +  ++ K   Y   ++E  D   
Sbjct: 7   QLEGLAAHYEELQEMMADPEVINDTKRYMEVSKEEADLREVVQKYKKYKAYQKEIADNKK 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I D  SD+++ ++A+ E   +EKE+ ELE +I  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IISDE-SDADLVEMAKEENSELEKELPELEEQIRILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYEKYAERQGWKVSMVDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +  ++  A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYETQNRDKYDAKRKNAVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LT+ KL+ V+ G +D+II+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359


>gi|306842976|ref|ZP_07475610.1| peptide chain release factor 1 [Brucella sp. BO2]
 gi|306286904|gb|EFM58429.1| peptide chain release factor 1 [Brucella sp. BO2]
          Length = 315

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 203/312 (65%), Positives = 254/312 (81%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           + KI      ++E  DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD
Sbjct: 2   VGKIRELSDARKEASDLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKD 61

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             DDK+ ILEIRAGTGG EAALF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+A
Sbjct: 62  VADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 121

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRID 225
           T+SG+GVFS++KFESGVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRID
Sbjct: 122 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 181

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
           TMRASG+GGQHVNTTDSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++ 
Sbjct: 182 TMRASGAGGQHVNTTDSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKA 241

Query: 286 ANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +ERS  R+ Q+GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++
Sbjct: 242 ESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 301

Query: 346 AHQAKMIGSASE 357
            HQ  ++    E
Sbjct: 302 DHQTALLAELGE 313


>gi|71281852|ref|YP_270226.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
 gi|119361527|sp|Q47Y94|RF1_COLP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71147592|gb|AAZ28065.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
          Length = 362

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 164/362 (45%), Positives = 250/362 (69%), Gaps = 7/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    ++++  L  RF E++  +S+  ++     +  L++E+  +  + S  + Y   + 
Sbjct: 1   MKSSVYQKLEVLVERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKSAED 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ D   D ++R++AQ E    +K + ++ +E+  LLLP+D +DD +C +EIR
Sbjct: 61  DFSTAELMLKD--DDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+F GDLFRMY RYA  + WK+EV++S++++ GGYKE++  ++G GVF  MK
Sbjct: 119 AGAGGDEAAIFAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TV V+PE  E D ++I   D+++DT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTG++V    ++SQH+NR +AM VL+ARL   E ++  +E  ++R+ 
Sbjct: 239 VNKTDSAIRITHIPTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRN 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + SGDRSERIRTYNF QGR++DHRINLTLY+L  +++G +  ++ P++  +QA ++   
Sbjct: 299 LVASGDRSERIRTYNFPQGRMSDHRINLTLYRLNEIMEGSLQLVMEPIMQENQADLLAEL 358

Query: 356 SE 357
           +E
Sbjct: 359 AE 360


>gi|325911742|ref|ZP_08174149.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
 gi|325476508|gb|EGC79667.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
          Length = 362

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  MS+   ++    Y+++++E A +  ++ K  ++   + E  +   
Sbjct: 7   QLESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  H SDS++ D+A+ E +A+E+E+ +LE EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIS-HESDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMY++YA  + W++ ++ S + + GG+K +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +      A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G ++DII+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDIISALVLYYQTKQLEKMAD 359


>gi|312871649|ref|ZP_07731741.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
 gi|311092874|gb|EFQ51226.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
          Length = 362

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  MS+   ++    Y+++++E A +  ++ K  ++   + E  +   
Sbjct: 7   QLESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  H SDS++ D+A+ E +A+E+E+ +LE EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIS-HESDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMY++YA  + W++ ++ S + + GG+K +   I+G  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +      A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G ++DII+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDIISALVLYYQTKQLEKMAD 359


>gi|257462414|ref|ZP_05626828.1| peptide chain release factor 1 [Fusobacterium sp. D12]
 gi|317060078|ref|ZP_07924563.1| peptide chain release factor 1 [Fusobacterium sp. D12]
 gi|313685754|gb|EFS22589.1| peptide chain release factor 1 [Fusobacterium sp. D12]
          Length = 359

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 166/357 (46%), Positives = 242/357 (67%), Gaps = 7/357 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++ ++  R+ E+   +S    ++   K+    +   A++P+I K   Y   K+E   + 
Sbjct: 3   DKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKEEVDFIK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +     D ++R + Q E+   E ++ ELE E+  LLLPKD +DD + I+EIR G GG 
Sbjct: 63  ESLK-TEKDEDMRVMMQEELKENEDKMPELEKELKILLLPKDPNDDNNVIVEIRGGAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDND-DGGYKEIVATISGRGVFSRMKFESGV 182
           EAA+F GDLFRMY RYA  +KWKVE++   D +   G KE+  +I G G +S++KFESGV
Sbjct: 122 EAAIFAGDLFRMYCRYAERKKWKVEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTD 241
           HRVQRVP TE++GR+HTS ATVAVLPE  +I    I  +D++IDT R+ G+GGQHVN TD
Sbjct: 182 HRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVQIDPKDLKIDTYRSGGAGGQHVNMTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V    E+SQ +NR +AMK L ++L ++E ++  +E    R+LQ+G+G
Sbjct: 242 SAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEIEKQRSEIEGERRLQVGTG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DR+E+IRTYNF QGRITDHRI LT+++LE  L G +D++I+ L+T  QA+M+ ++ E
Sbjct: 302 DRAEKIRTYNFPQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQAEMLSASGE 358


>gi|309803264|ref|ZP_07697361.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
 gi|309805669|ref|ZP_07699710.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
 gi|309806347|ref|ZP_07700360.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
 gi|309809934|ref|ZP_07703782.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871919|ref|ZP_07732001.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
 gi|312873839|ref|ZP_07733882.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
 gi|329921112|ref|ZP_08277635.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
 gi|308164772|gb|EFO67022.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
 gi|308165029|gb|EFO67271.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
 gi|308167331|gb|EFO69497.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
 gi|308169722|gb|EFO71767.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
 gi|311090621|gb|EFQ49022.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
 gi|311092496|gb|EFQ50858.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
 gi|328935019|gb|EGG31508.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
          Length = 362

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  MS+   ++    Y+++++E A +  ++ K  ++   + E  +   
Sbjct: 7   QLESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  H SDS++ D+A+ E +A+E+E+ +LE EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIS-HESDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMY++YA  + W++ ++ + + + GG+K +   ISG  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +      A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G ++DII+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDIISALVLYYQTKQLEKMAD 359


>gi|259501685|ref|ZP_05744587.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
 gi|302191107|ref|ZP_07267361.1| peptide chain release factor 1 [Lactobacillus iners AB-1]
 gi|309808088|ref|ZP_07702006.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
 gi|312874655|ref|ZP_07734679.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
 gi|315653748|ref|ZP_07906668.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
 gi|325913047|ref|ZP_08175420.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
 gi|259166970|gb|EEW51465.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
 gi|308168690|gb|EFO70790.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
 gi|311089885|gb|EFQ48305.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
 gi|315489110|gb|EFU78752.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
 gi|325477727|gb|EGC80866.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
          Length = 362

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L   + E++  MS+   ++    Y+++++E A +  ++ K  ++   + E  +   
Sbjct: 7   QLESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I  H SDS++ D+A+ E +A+E+E+ +LE EI  L+LPKD +DDK  I+EIR   GG E
Sbjct: 67  IIS-HESDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMY++YA  + W++ ++ + + + GG+K +   ISG  V+S++K+E+G HR
Sbjct: 126 ASLFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE+ GRVHTS ATVAV+PE  ++D+D+  +DIR+D  R+SG+GGQH+N T SAV
Sbjct: 186 VQRIPVTESQGRVHTSTATVAVMPEYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAV 245

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V    ++SQ QNR +AM++L++R+YD    +      A RK  +G+GDRS
Sbjct: 246 RMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ERIRTYN+ Q R+TDHRI LTL KL+ ++ G ++DII+ L+  +Q K +   ++
Sbjct: 306 ERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDIISALVLYYQTKQLEKMAD 359


>gi|313903650|ref|ZP_07837040.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466203|gb|EFR61727.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 389

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 167/345 (48%), Positives = 232/345 (67%), Gaps = 5/345 (1%)

Query: 15  RFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           RF ++E  +++        +   L +E A + P++     + +   + +    ++ +   
Sbjct: 44  RFDQLERELADPAVAADPRRWQPLAQERAELEPLVEAYRRWREAAADLEAARALLREAEE 103

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
             E R     EV  +E E + LE  +  LLLP+D  D +  I+EIRAGTGG EAALF GD
Sbjct: 104 ADE-RAYLAAEVERLEGERQALERALRGLLLPRDPRDQRDVIMEIRAGTGGEEAALFAGD 162

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY+RYA  + W+ E+++++++D GG+KEI+  +SGRG FSR+K ESGVHRVQRVP T
Sbjct: 163 LFRMYQRYAERQGWRTEIMAATESDLGGFKEIIFAVSGRGAFSRLKHESGVHRVQRVPVT 222

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           EA GR+HTS ATVAVLPEA E++V I  +D+ IDT  ASG GGQHVN T+SAVRITH PT
Sbjct: 223 EAGGRIHTSTATVAVLPEAEEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVRITHKPT 282

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           GI+V    E+SQH+NR RAMK+LRARL D   +R   E S  R+ Q+G+G+RSE+IRTYN
Sbjct: 283 GIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEELSQQRRSQVGTGERSEKIRTYN 342

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           F + R+TDHRI LTLY+L+ V+ G +D++++ L    +   +G A
Sbjct: 343 FRENRVTDHRIGLTLYRLQEVMDGDLDELLDALAAHDEQVRLGEA 387


>gi|297172147|gb|ADI23128.1| protein chain release factor A [uncultured gamma proteobacterium
           HF0770_09E07]
          Length = 359

 Score =  263 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 157/361 (43%), Positives = 239/361 (66%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M       +  ++ +  ++  ++S+      ++   KL +EY+ I  ++   + Y + + 
Sbjct: 1   MKQAIRDSLDSIQKKADDLSTQLSDPKLTSDINQLTKLNKEYSEIKDVVENWNRYQELEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +DL T+      D E++ LA  E    EKE+ ++E EI   LLPKD DD+++  +E+R
Sbjct: 61  SIEDLDTLAK----DEEMKSLALEEKDQNEKELEKIEAEIMIQLLPKDKDDERNSFVELR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAA+FVGDL+RMY R+A   KWKVE +    +  GG+KEIV  + G   +  +K
Sbjct: 117 AGAGGDEAAIFVGDLYRMYGRFAERSKWKVEKIKEIPSGTGGFKEIVIKVIGADTYGNLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GR+HTS ATVAVLPE  +  + D+ + +IR+DT RASG+GGQH
Sbjct: 177 FESGVHRVQRVPLTESQGRIHTSTATVAVLPEIDDIEEKDLDMSEIRVDTYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSAVR+TH+P+GI+V    ++SQH+N+ +A+ +L +++YD+E++++  E+++ RK 
Sbjct: 237 VNKTDSAVRLTHLPSGIVVECQDDRSQHKNKAKALGLLSSKIYDIEKQKIEQEKASERKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRSE+IRTYNF QGRITDHR+ LTLY ++  + G ID+++N L     A+ +   
Sbjct: 297 LVGTGDRSEKIRTYNFPQGRITDHRLKLTLYNIDSFIDGDIDEMLNSLKAQSNAEKLLEI 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|332876543|ref|ZP_08444305.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332685510|gb|EGJ58345.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 370

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 148/362 (40%), Positives = 221/362 (61%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L +R+ E+   +++   +     Y+KLT+EY  +  I+     Y    Q  QD  
Sbjct: 9   DKLEGLVSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDSLQTLQDAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E++++A+ E+ A EK I E+E  I  LL+P D +DDK+ I+EIR GTGG 
Sbjct: 69  EMLA-TEDDPEMKEMAREEMAATEKHIPEMEERIKLLLVPADPEDDKNVIMEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +Y  ++ WK+ + S ++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAATVAVLPEA E DV+I   +I+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAATVAVLPEAQEFDVEINEGEIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR  ++            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ +  RK
Sbjct: 248 VRARYLWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIANRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ Q RITDHRI   +  L   + G I D I+ L  A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQSRITDHRIGYNMQNLPSFMDGNIQDCIDQLTVAENAERMKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|86132255|ref|ZP_01050850.1| peptide chain release factor 1 [Dokdonia donghaensis MED134]
 gi|85817174|gb|EAQ38357.1| peptide chain release factor 1 [Dokdonia donghaensis MED134]
          Length = 359

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 225/354 (63%), Gaps = 6/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K RF E+   + +   +    +   L +EY+ +  ++     Y +     ++
Sbjct: 1   MLEKLQIVKQRFDEVSDLIIQPDIISDQKRYVSLNKEYSDLKALMDVREEYIELTDNFKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+E+ ++A+++    +  I ELE +I  +L+PKD +D K+ ++EIRAGTG
Sbjct: 61  AEEIIAD-GSDAEMVEMAKMQYEEAKSGIPELEEKIRMMLIPKDPEDAKNVVVEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAAL-RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           G EA++F GDL+RMY +Y      WK   +  S+   GG+KEI   I+G+ V+  MKFE+
Sbjct: 120 GDEASIFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFEITGQDVYGTMKFEA 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GRVHTSAATV VLPEA E DV I  +D+R+D   +SG GGQ VNTT
Sbjct: 180 GVHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQIEPKDVRVDFFCSSGPGGQSVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
            SAVR+THIPTG++     +KSQH+N+ +A KVLR+RLYD+E  +   E +A R  Q+ S
Sbjct: 240 YSAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRNSQVSS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           GDRS +IRTYN+ QGR+TDHRI LTLY L+ ++ G I  I+  L      + + 
Sbjct: 300 GDRSAKIRTYNYPQGRVTDHRIGLTLYDLQNIINGDIQKILEELRLVENTEKLK 353


>gi|189485187|ref|YP_001956128.1| peptide chain release factor 1 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|238054475|sp|B1GZI5|RF1_UNCTG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170287146|dbj|BAG13667.1| peptide chain release factor 1 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 356

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 240/355 (67%), Gaps = 6/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++  L + F E+E ++S+   +     Y +LT+++  + P+  K   Y +   E +
Sbjct: 1   MFLEKLKLLNSIFEEVESKLSDLSVISNQEEYRELTKQHFYLRPLAEKYIRYSKLLNEIK 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   +    + D+E++++A  E   + ++  ++ENEI  LL+P D ++DK+ I+EIRAGT
Sbjct: 61  DAEEL--QKSKDAEMKEIAFAEYNNLIEKRNQMENEIKVLLIPTDPNEDKNIIVEIRAGT 118

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+EAALFVGDL+ MY R+A    WK EVL S+    GGYKE+V  I+G  V+   KFE 
Sbjct: 119 GGNEAALFVGDLYGMYTRFAERNGWKYEVLGSNPTGLGGYKEVVFEINGGKVWRCFKFER 178

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TEASGRVHTSAATVAVLPEA E+DV+I +ED+RIDT RASG+GGQH+N T
Sbjct: 179 GAHRVQRVPETEASGRVHTSAATVAVLPEAEEVDVEIKMEDLRIDTYRASGAGGQHINKT 238

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSA+RITH+PTG++V    E+SQ +NR +A KVLRA++Y+          S+ RK QIGS
Sbjct: 239 DSAIRITHLPTGLVVACQDERSQIKNRAKAFKVLRAKIYEQRILEHEMRLSSERKQQIGS 298

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSE+IRTYNF Q RITDHRI  ++Y +  V+ G + +++N L+ A     +  
Sbjct: 299 GDRSEKIRTYNFPQNRITDHRIGYSVYNITEVMDGNLSELVNKLIKADIESKLKE 353


>gi|300088066|ref|YP_003758588.1| peptide chain release factor 1 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527799|gb|ADJ26267.1| peptide chain release factor 1 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 356

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 162/356 (45%), Positives = 242/356 (67%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ R+ EIE  +++           +L +E A++  +I     Y + +Q   +
Sbjct: 1   MLDKLEIIERRYLEIEQAIADPSVATDITLLTRLAKERASMEALIGMYRRYKRNEQSLTE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D E+R+LA+ EV  +++E  EL  ++   LLPKD + +++ I+EIRAGTG
Sbjct: 61  AEQML-ETETDEEMRELAKEEVKRLKQEQEELYEQLKIALLPKDPNAERNIIIEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF GDLFRMY RYA L+ WKVE++  ++   G +KE V  I G  V+SR+K+ESG
Sbjct: 120 GDEAKLFAGDLFRMYTRYAELKGWKVEIIDLTEQSGGTFKEAVFEIDGEDVYSRLKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEASGR+HTS ATVAV+P A +I+VDI  ED+RID   + G+GGQ+VN   
Sbjct: 180 VHRVQRVPVTEASGRIHTSTATVAVMPVAEDIEVDIKPEDLRIDIYHSGGAGGQNVNKVA 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +AVR+TH+P+G++V    E+SQ +NR +AM VL+ARL  +E+++   E + NR+ Q+GS 
Sbjct: 240 TAVRMTHLPSGLVVACQEERSQLKNRQKAMSVLKARLLAMEQEKQDKEMTDNRRAQVGSA 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSE+IRTYN+ Q R+TDHRI L+++ L  +++GY+DDII+ L T  QA ++ SA 
Sbjct: 300 DRSEKIRTYNYPQDRLTDHRIGLSVHNLPKIMEGYLDDIIDALATDEQACLLQSAG 355


>gi|313899685|ref|ZP_07833188.1| peptide chain release factor 1 [Clostridium sp. HGF2]
 gi|312955300|gb|EFR36965.1| peptide chain release factor 1 [Clostridium sp. HGF2]
          Length = 357

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 140/356 (39%), Positives = 224/356 (62%), Gaps = 6/356 (1%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           + +  +++  + NR+ EI   M     V       KL  E A ++ ++   + Y      
Sbjct: 1   MSVMIERLEGMVNRYHEINEMMMSPEIVTDSRMLAKLGREQADLTQVVETYTEYKNSVSA 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            +D   ++ +   D EI+++A++E+  +E +I E   ++  LL+PKD +D  + I+EIR 
Sbjct: 61  LEDAKALLLE--DDKEIKEMAKMEIEELEPKIEEYLEKLEILLIPKDPNDSHNAIVEIRG 118

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E  +F GDL+RMY ++A  + WK+E++   D + GG+  +   + G GV+ ++KF
Sbjct: 119 AAGGDEGNIFAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKF 178

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVP TE+ GR+HTS ATV V PE    D DI + D+ ++TMRASG+GGQH+N
Sbjct: 179 ESGSHRVQRVPKTESQGRIHTSTATVLVTPEIEPEDFDIDMNDLEMETMRASGAGGQHIN 238

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRI H PTGI V     +SQH+NR  A+  +R+R+Y+  ++++  E+   R+ +I
Sbjct: 239 KTDSAVRIVHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGIERRNKI 298

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           G+GDR+E+IRTYN+ Q R+TDHRI  T+ +L+ +++G + D+++ LL+A Q   + 
Sbjct: 299 GTGDRAEKIRTYNYPQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQQAKLA 354


>gi|160916055|ref|ZP_02078262.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991]
 gi|158431779|gb|EDP10068.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991]
          Length = 357

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 140/356 (39%), Positives = 221/356 (62%), Gaps = 6/356 (1%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           + +  +++  + NR+ EI   M     V       KL  E A +  ++   + Y    Q 
Sbjct: 1   MSVMIERLEGMVNRYHEINEMMMSPEIVSDSKMLAKLGREQADLVQVVETYTEYKNSVQA 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            +D   ++     D EI+++A++E+  +E +I     ++  LL+PKD +D  + I+EIR 
Sbjct: 61  LEDAKALL--MEDDKEIKEMAKMEIEELEPKIEGYLGKLEILLIPKDPNDSHNAIVEIRG 118

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E  +F GDL+RMY +YA  + W++E++   D + GG+  +   + G GV+ R+KF
Sbjct: 119 AAGGDEGNIFAGDLYRMYSKYAESQGWRIEIIEMDDCEAGGFSLVSFMVKGDGVYGRLKF 178

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVP TE+ GR+HTS ATV V PE    D DI + D+ I+TMRASG+GGQH+N
Sbjct: 179 ESGSHRVQRVPKTESQGRIHTSTATVLVTPEIEAEDFDIDMNDLEIETMRASGAGGQHIN 238

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRI H PTGI+V     +SQH+NR  A+  +R+R+Y+  ++++  E+   R+ +I
Sbjct: 239 KTDSAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGVERRSKI 298

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           G+GDR+E+IRTYN+ Q R+TDHRI   + +L+ +++G + D+++ L +A Q   + 
Sbjct: 299 GTGDRAEKIRTYNYPQNRVTDHRIGYNVNQLDRIMEGRMQDLLDALCSADQQAKLA 354


>gi|296775701|gb|ADH42977.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_38M03]
          Length = 358

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 168/357 (47%), Positives = 250/357 (70%), Gaps = 3/357 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +   ++ D+ N+   +E  +S        + K ++EY+ +  II     + +   E++D
Sbjct: 1   MVPINKVMDIINKHMSLEKELSTGDIDPKLFAKKSKEYSNLGSIIDSAKSFVKFDNEKKD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D  +D E+ DLA+ ++  + K   + EN++   LLPKD DDDK+ I+EIRAGTG
Sbjct: 61  LENIVKDKTNDPEMIDLAEKDLSELFKRREKWENDLKIFLLPKDEDDDKNAIVEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  DLF+MYE+  + +KW +E+++ S ++ GG+KE++ +++G  ++S +K+ESG
Sbjct: 121 GLEASLFCADLFKMYEKVCSKKKWNLEIINISKSEAGGFKEVIFSVNGNDIYSYLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE  GRVHTSAATVAVLPE  E+D++I   D+R+D  RA G GGQ VNTTD
Sbjct: 181 VHRVQRIPETETQGRVHTSAATVAVLPEVEEVDIEIKESDLRVDVFRAGGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIP+G++V+  + KSQH+N+ +A+K+LR+R+Y+ E+++   ERS+NR+ QIGSG
Sbjct: 241 SAVRITHIPSGVVVSQQDEKSQHKNKAKALKILRSRVYEAEKRKKDQERSSNRRSQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRINLTL+KLE  L G I +++   L    Q   + + +
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEEFLSGDIHEEMNQELRLQEQNLKLKNLN 357


>gi|121593273|ref|YP_985169.1| peptide chain release factor 1 [Acidovorax sp. JS42]
 gi|166223524|sp|A1W4B8|RF1_ACISJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120605353|gb|ABM41093.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax sp.
           JS42]
          Length = 367

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 166/369 (44%), Positives = 239/369 (64%), Gaps = 17/369 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S    +     Y  ++ E+A ++ +  + + Y Q++ 
Sbjct: 1   MKPFLRSQLERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ ++AQ E+ A E E+ +LE+E+  LLLPKD DD+++  +EIR
Sbjct: 61  DLAGAREMLE----DPDMAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------ 171
           AGTGG E+ALF GDL RMY RYAA   WKVEV+S+++++ GGYKE+V  I G+       
Sbjct: 117 AGTGGDESALFAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQSGTGPSG 176

Query: 172 --VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMR 228
             V+  +KFESG HRVQRVPATE  GR+HTSA TVAV+PE  E         D+RIDT R
Sbjct: 177 SGVYGALKFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFR 236

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG+GGQH+N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A 
Sbjct: 237 ASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAA 296

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + +A RK  IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  +++G + +++  L  A 
Sbjct: 297 KEAALRKGLIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 356

Query: 348 QAKMIGSAS 356
           +A+++    
Sbjct: 357 EAELLAELG 365


>gi|330995510|ref|ZP_08319414.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT
           11841]
 gi|329575422|gb|EGG56964.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT
           11841]
          Length = 370

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 148/362 (40%), Positives = 221/362 (61%), Gaps = 13/362 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L +R+ E+   +++   +     Y+KLT+EY  +  I+     Y    Q  QD  
Sbjct: 9   DKLEGLVSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDSLQTLQDAK 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E++++A+ E+ A EK I E+E  I  LL+P D +DDK+ I+EIR GTGG 
Sbjct: 69  EMLAIE-DDPEMKEMAREEMAAAEKHIPEMEERIKLLLVPADPEDDKNVIMEIRGGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +Y  ++ WK+ + S ++   GG+KEI+ +++G  V+  +K+ESGVH
Sbjct: 128 EAALFAGDLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSAATVAVLPEA E DV+I   +I+ DT R+SG+GGQ+VN  +S 
Sbjct: 188 RVQRVPATETQGRVHTSAATVAVLPEAQEFDVEINEGEIKWDTFRSSGAGGQNVNKVESG 247

Query: 244 VRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           VR  ++            ++  +  + Q +N+ RA+  LR  +YD E ++  ++ +  RK
Sbjct: 248 VRARYLWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIANRRK 307

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             + +GDRS +IRTYN+ Q RITDHRI   +  L   + G I D I+ L  A  A+ +  
Sbjct: 308 TMVSTGDRSAKIRTYNYPQSRITDHRIGYNMQNLPSFMDGNIQDCIDQLTVAENAERMKE 367

Query: 355 AS 356
           + 
Sbjct: 368 SE 369


>gi|150008712|ref|YP_001303455.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC
           8503]
 gi|255014510|ref|ZP_05286636.1| peptide chain release factor 1 [Bacteroides sp. 2_1_7]
 gi|256841252|ref|ZP_05546759.1| peptide chain release factor 1 [Parabacteroides sp. D13]
 gi|298375991|ref|ZP_06985947.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19]
 gi|301311522|ref|ZP_07217449.1| peptide chain release factor 1 [Bacteroides sp. 20_3]
 gi|166223582|sp|A6LDR9|RF1_PARD8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149937136|gb|ABR43833.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC
           8503]
 gi|256737095|gb|EEU50422.1| peptide chain release factor 1 [Parabacteroides sp. D13]
 gi|298267028|gb|EFI08685.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19]
 gi|300830608|gb|EFK61251.1| peptide chain release factor 1 [Bacteroides sp. 20_3]
          Length = 369

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 150/361 (41%), Positives = 226/361 (62%), Gaps = 13/361 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L +RF E+   +++   +     ++KL +EY  +  I+   S Y +     ++   
Sbjct: 9   KLDGLVSRFEEVGTLITDPAVIADMKRFVKLNKEYRDLEKIVGARSEYVKVLNGIEEAKA 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E+R++A+ E+    + I  LE EI  LL+P D  DDK+ I+EIR GTGG E
Sbjct: 69  LL-ESEQDPEMREMAREELDTCNERIPALEEEIKLLLVPADPQDDKNAIVEIRGGTGGDE 127

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDL+RMY +Y  L+ WK+ V S S+   GG+KEI+ T+SG  V+  +K+ESGVHR
Sbjct: 128 AALFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTVSGEKVYGTLKYESGVHR 187

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GRVHTSAATVAVLPEA E DV+I   +I+ DT R+ G+GGQ+VN  +S V
Sbjct: 188 VQRVPATETQGRVHTSAATVAVLPEADEFDVEINEGEIKWDTFRSGGAGGQNVNKVESGV 247

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ ++            ++  +  + Q +N+ RA+  LR+ +YD E ++  ++ ++ RK 
Sbjct: 248 RLRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLDDIASKRKT 307

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D ++ L+ A  A+ +  +
Sbjct: 308 MVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLSAFMDGEIQDCLDHLIVAENAERLKES 367

Query: 356 S 356
            
Sbjct: 368 E 368


>gi|160872697|ref|ZP_02062829.1| peptide chain release factor 1 [Rickettsiella grylli]
 gi|159121496|gb|EDP46834.1| peptide chain release factor 1 [Rickettsiella grylli]
          Length = 363

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 157/361 (43%), Positives = 231/361 (63%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +  R+ E+   ++    +     +  L++EY  + P++     Y     
Sbjct: 1   MKTSLFNRLTLIVQRYEELTALLANIEVIKDQNHFRNLSKEYVQLGPLVQCFQQYQTNLD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                   + D   D+ +++LA  E+   +++  ELE E+ +LLLP+D +DD++  LEIR
Sbjct: 61  RLNQAEHCLKDK--DAIVQELAMEEMKIAQQKKIELEKELEHLLLPQDPNDDRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           A  GG EAA+F GDLFRMY RYA  + W VE++  + ++ GGYKEI+A ISG  V++ +K
Sbjct: 119 AAAGGDEAAIFAGDLFRMYSRYAESQHWHVEIIHRNPSEQGGYKEIIARISGTKVYAHLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TEA GRVHTS  TVA+LPE   +D       D++IDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPETEAQGRVHTSTCTVAILPEIESMDDITLHPSDLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           V  TDSA+RITH+P+G++V    E+SQH+NR RAM +L+A+L   ++ +   E +  R+ 
Sbjct: 239 VQKTDSAIRITHLPSGLVVECQDERSQHKNRARAMSLLQAKLLAAQKAKQRREEAETRRD 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRSERIRTYNF QGR+TDHRINLTLY+L  +++G+++ +I  L   +QA  + + 
Sbjct: 299 LVGTGDRSERIRTYNFPQGRLTDHRINLTLYQLSDIMEGHLEPVIQSLTHEYQADELAAL 358

Query: 356 S 356
            
Sbjct: 359 G 359


>gi|187734557|ref|YP_001876669.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|238691860|sp|B2UL99|RF1_AKKM8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187424609|gb|ACD03888.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 358

 Score =  262 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 156/352 (44%), Positives = 228/352 (64%), Gaps = 6/352 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I   + R  E+E  ++E    +   K +    E+  +  ++      +  +Q+  D   +
Sbjct: 7   IEKRRQRLEELETVIAEPDFFNDQKKASEIMREHRRLKELMETWDSLNATEQQLADNQEL 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D E+ +LA +E+  +E  + +L +++ Y LLP+DT +D+  I+EIRAGTGG EA
Sbjct: 67  AK--TDDPELAELAALEIPELEAALEKLRSDVQYSLLPRDTTEDRDAIIEIRAGTGGDEA 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           +LF GDL RMY+R+A  R W+ E L SS +D GG+KE+V  I+G  VF  +K+E GVHRV
Sbjct: 125 SLFAGDLLRMYQRFAEERGWRFEHLESSPSDVGGFKEVVCRIAGEEVFRFLKYEGGVHRV 184

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVPATE  GR+HTS ATVAV+PEA E+D++I  ED+RI+  R+ G+GGQHVN T+SAV+
Sbjct: 185 QRVPATETQGRIHTSTATVAVMPEAEEVDIEIRPEDLRIEVCRSGGAGGQHVNKTESAVQ 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I HIPTG+ V    E+SQ +NR + MK+LRA+L++ +++  A + SA R+  IGSG R E
Sbjct: 245 IWHIPTGVYVRCEEERSQMKNREKGMKILRAKLFEAKKREEAEKYSAARRNLIGSGGREE 304

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +IRTYNF Q R+TDHRI  T + L+ +L G ++D+I  L  A   + +  A 
Sbjct: 305 KIRTYNFPQNRLTDHRIGYTSHNLDGILMGQLEDLIMALQHAEMQERLAEAG 356


>gi|262383596|ref|ZP_06076732.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B]
 gi|262294494|gb|EEY82426.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B]
          Length = 369

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 151/361 (41%), Positives = 227/361 (62%), Gaps = 13/361 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L +RF E+   +++   +     ++KL +EY  +  I+   S Y +     ++   
Sbjct: 9   KLDGLVSRFEEVGTLITDPAVIADMKRFVKLNKEYRDLEKIVGARSEYVKVLNGIEEAKA 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E+R++A+ E+ A  + I  LE EI  LL+P D  DDK+ I+EIR GTGG E
Sbjct: 69  LL-ESEQDPEMREMAREELDACNERIPALEEEIKLLLVPADPQDDKNAIVEIRGGTGGDE 127

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDL+RMY +Y  L+ WK+ V S S+   GG+KEI+ T+SG  V+  +K+ESGVHR
Sbjct: 128 AALFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTVSGEKVYGTLKYESGVHR 187

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE  GRVHTSAATVAVLPEA E DV+I   +I+ DT R+ G+GGQ+VN  +S V
Sbjct: 188 VQRVPATETQGRVHTSAATVAVLPEADEFDVEINEGEIKWDTFRSGGAGGQNVNKVESGV 247

Query: 245 RITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           R+ ++            ++  +  + Q +N+ RA+  LR+ +YD E ++  ++ ++ RK 
Sbjct: 248 RLRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLDDIASKRKT 307

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + +GDRS +IRTYN+ QGRITDHRIN T+Y L   + G I D ++ L+ A  A+ +  +
Sbjct: 308 MVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLSAFMDGEIQDCLDHLIVAENAERLKES 367

Query: 356 S 356
            
Sbjct: 368 E 368


>gi|300871300|ref|YP_003786173.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
 gi|300689001|gb|ADK31672.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
          Length = 358

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 160/358 (44%), Positives = 243/358 (67%), Gaps = 3/358 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA--YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                ++  ++N + +I  +++++   D      L ++ + I  I+++        +E +
Sbjct: 1   MSIIDKLSSVENTYNDIVDKLNDANIKDNRVIQDLMKKKSEIEDIVNEYKKLKTVLKEIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D + ++   ++D E++++A +E+  + ++   + N++  LLLPKD +D K+ I+EIR GT
Sbjct: 61  DANEMLNHSDTDKELKNMALLEIEELNQKKENIINDLRLLLLPKDKNDGKNIIVEIRVGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG E+ALFVGDLFRMY R+     +K+E++  S  + GGYKE++ ++SG+  +  +KFES
Sbjct: 121 GGDESALFVGDLFRMYSRFIERANFKMEIIDISPTELGGYKEVIFSVSGKNAYRTLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQR+PATE+ GR+HTSA+TVA++PEA E DV I  EDIR+D  R+SG GGQ VNTT
Sbjct: 181 GTHRVQRIPATESGGRIHTSASTVAIMPEAEESDVIIKDEDIRVDIFRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V    EKSQH+N+ +A+KVLRAR+Y+ E      +    R+ +IGS
Sbjct: 241 DSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKEDKERRDKIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF Q R+TDHRIN+TLYKL+  + G I +I + L    Q +++ S S+
Sbjct: 301 GDRSERIRTYNFPQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQEELLASYSD 358


>gi|332290785|ref|YP_004429394.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168871|gb|AEE18126.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 359

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 229/354 (64%), Gaps = 6/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K RF EI   + +   +     Y++L +EY+ +  ++    +Y +  +  ++
Sbjct: 1   MLEKLQIVKQRFDEISDLIIQPDIITDQKRYVQLNKEYSDLKALMEVREVYIELSENLKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+E+ ++A+++    +  I ELE +I  +L+PKD +D K+ ++EIRAGTG
Sbjct: 61  AEEIIAD-GSDAEMVEMAKMQYEEAKTGIPELEEKIRMMLIPKDPEDAKNVVVEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAAL-RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           G EA++F GDL+RMY +Y      WK   +  S+   GG+KEI   I+G+ V+  MKFE+
Sbjct: 120 GDEASIFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFEITGQDVYGTMKFEA 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GRVHTSAATV VLPEA E DV I  +D+R+D   +SG GGQ VNTT
Sbjct: 180 GVHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQIEPKDVRVDFFCSSGPGGQSVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
            SAVR+THIPTG++     +KSQH+N+ +A KVLR+RLYD+E  +   E +A R  Q+ S
Sbjct: 240 YSAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKQEEDAAKRNSQVSS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           GDRS +IRTYN+ QGR+TDHRI LTLY L+ ++ G I  I+  L      + + 
Sbjct: 300 GDRSAKIRTYNYPQGRVTDHRIGLTLYDLQNIVNGDIQKILEELRLVENTEKLK 353


>gi|296121187|ref|YP_003628965.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776]
 gi|296013527|gb|ADG66766.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776]
          Length = 363

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 5/349 (1%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +     RF E+E ++ +      V   +++  E+  +S I S +  ++  + +     T+
Sbjct: 9   LQAKLARFEELEAQLQDPEVLADVSKMLEIQREHGGLSKIASTVREFNTLQDDLLAAETM 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D E +++AQ E+  ++     L+ E+  ++   D+    S I+EIRAGTGG EA
Sbjct: 69  LAEATDD-ETKEIAQAEIDELKPRFEPLKTELEDMVTAGDSLTRGSLIMEIRAGTGGDEA 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF  DL+ MY RY  L+ WK EV+  + ++ GG KE+V TI+G G + R++FESG HRV
Sbjct: 128 ALFARDLYEMYTRYVDLQGWKYEVMELTTSELGGLKEVVITITGSGAYHRLQFESGGHRV 187

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE  GRVHTSAATVAV+ EA+EIDV+I  ED+RIDTMRA G GGQ VN T+SAVR
Sbjct: 188 QRVPETETQGRVHTSAATVAVMAEASEIDVEIRDEDLRIDTMRAGGPGGQKVNKTESAVR 247

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIP+G++V    EKSQH+N+ +A++VLR+RL ++   +    R+  R+  +GSGDRSE
Sbjct: 248 ITHIPSGLVVRIQDEKSQHKNKAKALRVLRSRLMELRESQAHAVRAEQRRTLVGSGDRSE 307

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           RIRTYNF Q R+TDHRI LT+YKL+ ++QG +D++INP+L   + + + 
Sbjct: 308 RIRTYNFPQNRLTDHRIGLTVYKLDQIMQGNLDELINPILAFDREERLK 356


>gi|209527112|ref|ZP_03275626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
 gi|209492452|gb|EDZ92793.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
          Length = 371

 Score =  262 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 141/358 (39%), Positives = 230/358 (64%), Gaps = 8/358 (2%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  F E+ LR+++       D + ++ +  +++  +++    +   + E     
Sbjct: 8   DKLKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQDWKTTQTELAGAK 67

Query: 64  TVIGDHNSDSE---IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            ++ +  +D E   ++++A +EV  +  +++ELE  +  LLLP+D +DDK+ +LEIRAGT
Sbjct: 68  QILRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIMLEIRAGT 127

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+++ GDL RMY RYA  + W+V +LS S  D GG+KE +  I G  V+S++KFE+
Sbjct: 128 GGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGARVYSQLKFEA 187

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GRVHTS ATVA++PE  +++V I  +DI + T R+ G+GGQ+VN  
Sbjct: 188 GVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDPKDIEMTTARSGGAGGQNVNKV 247

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AV + H PTGI +  + E+SQ +NR RAM++LRA+LY+ + +   +  ++ R+ Q+G+
Sbjct: 248 ETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKLREQQDAVTSMRRSQVGT 307

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           G RSE+IRTYN+   R+TDHR+      L  VL+G I D+I   +   Q + +   +E
Sbjct: 308 GSRSEKIRTYNYKDNRVTDHRLGHNFS-LAPVLEGGIGDLIQACIIQDQQERLAQLAE 364


>gi|120434841|ref|YP_860527.1| peptide chain release factor 1 [Gramella forsetii KT0803]
 gi|166223562|sp|A0LYL5|RF1_GRAFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117576991|emb|CAL65460.1| peptide chain release factor 1 [Gramella forsetii KT0803]
          Length = 358

 Score =  262 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 154/357 (43%), Positives = 230/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +K RF E+   + +   +     YI+L +EY  +  ++ +   Y       Q+
Sbjct: 1   MIERLNIVKQRFDEVNDLIIQPDVISDQKRYIELNKEYKDLRALMDEREKYISITDNIQE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD E+ ++A++++   + ++  LE++I  +L+PKD +D K+ ++EIRAGTG
Sbjct: 61  AEEIISD-GSDPEMTEMAKLQLDEAKGQLPALEDKIRMMLIPKDPEDGKNIVMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDL+RMY +Y   R W   ++  S+   GG+KE++  +SG  V+  MKFE+G
Sbjct: 120 GDEASIFAGDLYRMYTKYVEGRGWSHNIVDFSEGTSGGFKEMIFEVSGDDVYGTMKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV+I  +++RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVEIDPKEVRIDYFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTG++     +KSQH+N+ +A +VLR+RLY++E  +     +A R   + SG
Sbjct: 240 SAVRLTHEPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKKMEADAAKRNSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN++Q R+TDHRINLTLY L  ++ G I  II+ L  A   + +   S+
Sbjct: 300 DRSAKIRTYNYAQSRVTDHRINLTLYDLSNIINGDIQKIIDELQLAENTEKLKENSD 356


>gi|257457982|ref|ZP_05623141.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
 gi|257444695|gb|EEV19779.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
          Length = 355

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 252/356 (70%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L  R+ E+E  + +   +   + Y +   E+A +S ++ + + Y + +QE   
Sbjct: 1   MKEKLESLSVRWKELEEEIQDPALIKNQNRYKEAMREHAYLSKLMEEYAQYLRFEQEIIQ 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D E++++A+ E+  +E ++ + EN +  LL+P D  ++K+ I+EIR GTG
Sbjct: 61  TRAMMQEE-TDHELKEMAREELHNLEAQLEQSENNLKVLLIPPDPLEEKNIIMEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL +MY  YA L+ WK E+LSS++ + GG+KE+  +ISG+ V+  +++ESG
Sbjct: 120 GEEAALFAADLLKMYTHYAELKNWKYEILSSNETELGGFKEVTLSISGKYVYGSLRYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE SGR+HTSA TVAVLPEA E ++ I  ED+RID MRA G GGQ VNTTD
Sbjct: 180 VHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIVIKQEDLRIDVMRAGGPGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG++V    EKSQ +N+ +AM+VLR+RLYD+E  +  +ER+ +RK Q+GSG
Sbjct: 240 SAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDMEEAKKQSERAEDRKNQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYN+ Q R+TDHRINLTLYKL+ ++QG +++I+  L  A + +M+ + +
Sbjct: 300 DRSERIRTYNYPQNRVTDHRINLTLYKLDTIMQGDLNEIVEALCIAAREQMMKAQA 355


>gi|162457313|ref|YP_001619680.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56']
 gi|229470353|sp|A9G9L1|RF1_SORC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161167895|emb|CAN99200.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56']
          Length = 364

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 235/358 (65%), Gaps = 8/358 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEE 59
            L   ++  ++ RF E+E  M     + A     +L  E   I P++   +     ++  
Sbjct: 1   MLPIAKLEAVQRRFQELEHLMCSPAVLAAPAELQRLNRERTEIEPVVVAFARMRDVERRI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +    +    SD ++ +LAQ E+  +E E   L  E+  LLLPKD +D ++ ++EIR+G
Sbjct: 61  AEDREAL----SDPDLSELAQAELPELELERERLAAELEVLLLPKDPNDTRNTVIEIRSG 116

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF  DLFRM  RYA  ++WKVEVL+ S+   GGYKE+ A I+G+ V+S +++E
Sbjct: 117 EGGEEAALFAADLFRMLCRYAETKRWKVEVLNLSEASAGGYKEVAALITGQDVYSHLRYE 176

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
            GVHRVQRVP+TE  GR+HTS ATVAVLPEA E+DV I  +D+ I    + G GGQ VNT
Sbjct: 177 GGVHRVQRVPSTETQGRIHTSTATVAVLPEADEVDVHIDEKDLEISIAASGGPGGQGVNT 236

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAV+I H+PTG++V    E+SQ +N+ +AMKVLR+RL ++E++R    +SA R+  +G
Sbjct: 237 TNSAVQIKHLPTGMIVKCQDERSQLKNKAKAMKVLRSRLLELEQRRQEEAQSAERRTMVG 296

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +G+R++++RTYNF Q R+TDHRI LTL+KL+ +++G ++++I  L T  QA+++    
Sbjct: 297 TGERAQKVRTYNFPQNRVTDHRIGLTLHKLDKIIEGDLEELIGALRTHRQAELLRRGG 354


>gi|126663551|ref|ZP_01734548.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38]
 gi|126624499|gb|EAZ95190.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38]
          Length = 357

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 151/354 (42%), Positives = 228/354 (64%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF EI   + +   +     Y++L +EY  +  ++ K   Y       ++
Sbjct: 1   MLDRLQYVKQRFDEISDLIIQPDVIADQKRYVQLNKEYKDLKGLVEKREEYIALDGNIKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            + +I D  SD+E+ ++A++++   +  + +LE EI ++L+PKD +D K+ ++EIRAGTG
Sbjct: 61  ANEIIAD-GSDAEMVEMAKMQLDEAKDRLPQLEEEIKFMLIPKDPEDAKNVMVEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y   R W+  V+  S+   GG+KE++  ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYTKYCEARGWRTSVVDISEGTSGGFKEVIFEVTGEDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV I + D+R+D   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQIDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++     +KSQH+N+ +A+ VLR+RLY+ E      E +  R  Q+ SG
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKALDVLRSRLYEKELAIKQAEDATKRSSQVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRS +IRTYN+SQGR+TDHRI L ++ ++ V+ G I   ++ L   +  + +  
Sbjct: 300 DRSAKIRTYNYSQGRVTDHRIGLDVFDMDGVMNGKIQKFVDELQLVNNMEKLKE 353


>gi|298245470|ref|ZP_06969276.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963]
 gi|297552951|gb|EFH86816.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963]
          Length = 358

 Score =  262 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 148/358 (41%), Positives = 223/358 (62%), Gaps = 7/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEE 59
                ++  L  R+ E+   M++   +       +   E + +S ++ K        ++ 
Sbjct: 1   MDLMDKLATLATRYEELNNLMAQPDVLTDISLLQRYGREQSELSTVVEKYHELIDTDKQI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++   +        E+RD+A  E+  ++    +L  ++   LLPKD  D+K+ ++ I+ G
Sbjct: 61  KEAQEMYDSEEG--ELRDMAFEELEQLKARKEQLLEDVQVALLPKDIMDEKNAVVTIQGG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF  DLFRMY RYA  R+WK+E+L  +D + GG+K+I   I G+G +SRMK+E
Sbjct: 119 AGGDEAALFAADLFRMYSRYADGRRWKIEILDGNDTEQGGFKDITFVIRGKGAYSRMKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
            G HRVQRVP+TEA+GR+HTS A V VLPE   +I +++   DIR+D  R++G GGQ VN
Sbjct: 179 GGTHRVQRVPSTEANGRIHTSTAKVIVLPEADDDIQIEVKDADIRVDVYRSTGHGGQSVN 238

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PTG++V    EKSQ +N+ +A+ VL++RL+D+E  +   E    R+ Q+
Sbjct: 239 TTDSAVRITHLPTGLVVTCQDEKSQLKNKQKALNVLKSRLWDLEEAKRQEELGKARRSQV 298

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GDRSE+IRTYNF Q R+TDHRI LT + L  +L G +D+ I+ L+T  QA+ +   
Sbjct: 299 QTGDRSEKIRTYNFPQDRVTDHRIGLTRHNLPGILDGSLDEFIDNLITVDQAEKLQGM 356


>gi|113476549|ref|YP_722610.1| peptide chain release factor 1 [Trichodesmium erythraeum IMS101]
 gi|119361636|sp|Q110D7|RF1_TRIEI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110167597|gb|ABG52137.1| bacterial peptide chain release factor 1 (bRF-1) [Trichodesmium
           erythraeum IMS101]
          Length = 369

 Score =  262 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 235/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  + E+ LR+++         + KL +  +++  +++    +   ++E  D  
Sbjct: 8   DKLKSVEQTYNELTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQEELADAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E++++A++EV  +E ++  LEN++   LLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  EILKEAVGDLEMQEMAKVEVEDLEAKLESLENQMKIALLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RY+  + WKV +LS S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  +++V+I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVEIDQKDIELSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +    E S+ R+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKLQEQQAEVSSIRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+N     L  +L+G I+++I   +T  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLNQNFS-LVPLLEGDIENVIQACITQDQQERLQELA 360


>gi|296127053|ref|YP_003634305.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
 gi|296018869|gb|ADG72106.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
          Length = 358

 Score =  262 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 164/358 (45%), Positives = 240/358 (67%), Gaps = 3/358 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA--YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                ++  ++N + +I  +++++   D      L ++ + I  I+ +        +E  
Sbjct: 1   MSIIDKLSLVENTYEDIVQKLNDANIKDNRVIQDLMKKKSEIEDIVEEYRKLKTVLKEID 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D + +I +  +D +++++A  E+  + ++  ++ N +  LLLPKD +D K+ I+EIR GT
Sbjct: 61  DSNEMINNPETDKDLKEMALAEIEELNQKKEDIINSLRLLLLPKDKNDGKNIIIEIRVGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG E+ALFVGDLFRMY R+      K+E++ +S  + GGYKE++ ++SG+  +  +KFES
Sbjct: 121 GGDESALFVGDLFRMYSRFIERANLKMEIIDTSPTELGGYKEVIFSVSGKNAYRALKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQR+PATE+ GR+HTSA+TVAV+PEA E DV I  EDIR+D  R+SG GGQ VNTT
Sbjct: 181 GTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVVIKDEDIRVDIFRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V    EKSQH+N+ +A+KVLRAR+Y+ E      + +  R+ QIGS
Sbjct: 241 DSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKEAKERREQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF Q R+TDHRINLTLYKL+  + G I +I + L    Q  M+ S S+
Sbjct: 301 GDRSERIRTYNFPQNRVTDHRINLTLYKLDRFMDGEITEITDALFKKEQEDMLASYSD 358


>gi|327404087|ref|YP_004344925.1| peptide chain release factor 1 (bRF-1) [Fluviicola taffensis DSM
           16823]
 gi|327319595|gb|AEA44087.1| bacterial peptide chain release factor 1 (bRF-1) [Fluviicola
           taffensis DSM 16823]
          Length = 359

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 156/350 (44%), Positives = 233/350 (66%), Gaps = 5/350 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  +  RF E+   +++   +     Y+KL +EY  +  + +    Y       +    
Sbjct: 7   KLEAIHFRFIEVGKMITDPEIISDMERYVKLNKEYRDLEEVDAAYKSYKNVLDNLKSSKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +  +D E+R++A++E+  +E++   +E EI  LL+PKD +DDK+ I+E+RAGTGG E
Sbjct: 67  ML-EVETDPEMREMAKMEINELEQQRPIIEEEIKVLLIPKDPEDDKNAIIELRAGTGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A +FV D++RMY  Y     W  E+++SS+    GYKE+  +ISG G++  +KFESGVHR
Sbjct: 126 ACIFVEDIYRMYTMYFKEMGWAYEIVNSSEGSAKGYKEVSMSISGAGIYGMLKFESGVHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTSA TVAVLPEA E+D ++ + D+R DT RASG+GGQH+N T+SA+
Sbjct: 186 VQRVPETESQGRVHTSAITVAVLPEAEEVDFELDMNDVRKDTFRASGAGGQHINKTESAI 245

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG +V     +SQH+N  +A+ VLR+RLY  E  R+  ER+A+RK  + +GDRS
Sbjct: 246 RLTHIPTGTVVECQDGRSQHKNLAQAISVLRSRLYQAELDRVHQERAAHRKTLVSTGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
            +IRTYN+ QGRITDHRIN T+Y L   + G + ++I+ L  A  A+ + 
Sbjct: 306 AKIRTYNYPQGRITDHRINKTIYNLSAFMNGDVQEMIDALKMAENAEKMK 355


>gi|149369846|ref|ZP_01889697.1| peptide chain release factor 1 [unidentified eubacterium SCB49]
 gi|149356337|gb|EDM44893.1| peptide chain release factor 1 [unidentified eubacterium SCB49]
          Length = 358

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 158/357 (44%), Positives = 229/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +KNRF E+   + +   +     YI LT+EY  ++ ++ K   Y    +   +
Sbjct: 1   MLEKLQIVKNRFDEVSDLIIQPDVISDQKQYISLTKEYKDLNALMKKREAYIMATEHIAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D  SD+++ ++A++++   +  I  LE EI  +L+PKD +D K+ ++EI+AGTG
Sbjct: 61  AEEILAD-GSDADMVEMAKMQMDEAKSNIAVLEEEIKLMLIPKDPEDAKNAVMEIKAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDL RMY +Y   + WK  V+  S+   GGYK I   + G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLHRMYTKYCESKGWKTSVVDFSEGTSGGYKAIQMEVEGDDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV V PEA E DV I ++D+RID   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVFPEAEEFDVHIEMKDVRIDYFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++     +KSQH+N+ +A KVLR+RLYD+E  +   E +  R  Q+ SG
Sbjct: 240 SAVRLTHVPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQAEDALKRGSQVTSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+SQGR+TDHRINLTLY L  ++ G I  II+ L      + +  + +
Sbjct: 300 DRSAKIRTYNYSQGRVTDHRINLTLYDLSNIIDGDIQKIIDELQLVDNTERLKESGD 356


>gi|237756512|ref|ZP_04585042.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691328|gb|EEP60406.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 360

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 244/352 (69%), Gaps = 5/352 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  ++ +  ++E  M++   +    K+    +E+  +S I++  + Y +  ++ +++  
Sbjct: 8   QLEGIEEKLKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVNRQIEEVKQ 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D ++R+LA+ E+ +++K   +LE +I   LLPKD +D+++ ILEIR G GG E
Sbjct: 68  LLNSTPDD-DLRELAEEELESLKKHREDLEKKIEIALLPKDPNDERNVILEIRQGAGGDE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF  +LFRMY+RYA    WK E+LS    + GG KE++A I G+G +SR+K+ESGVHR
Sbjct: 127 ASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+SGR+HTS  TVAVLPEA E+D++I  E++RI+TMRA G+GGQHVNTTDSAV
Sbjct: 187 VQRVPETESSGRIHTSTVTVAVLPEAEEVDIEIKPEELRIETMRAGGAGGQHVNTTDSAV 246

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTG++V    E+SQ QN+++AM++LRARL D   +    + +  RK Q+G+G+RS
Sbjct: 247 RITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYYERLEKEKIAKERKEQVGTGERS 306

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           E+IRTYNF Q R+TDHR+N T Y++  ++ G +D+II+ L+     + +   
Sbjct: 307 EKIRTYNFPQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKENEEKLAKL 358


>gi|313681233|ref|YP_004058971.1| bacterial peptide chain release factor 1 (brf-1) [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154093|gb|ADR32771.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfuricurvum
           kujiense DSM 16994]
          Length = 355

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 172/358 (48%), Positives = 254/358 (70%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    NR+ E+   +S       +    +L++E ++I  I++K + Y +  ++ +
Sbjct: 1   MLSDKLTPFINRYNELTELLSSPDIGNDIKRMTELSKEQSSIQAIVNKATEYKKLLEDIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +  ++      D+E+ +LA+ E+  +E  +  LE EI  LL+P D +D ++  +E+RAGT
Sbjct: 61  ENKSLAF----DAELGELAKEELRTLEPMVEPLEEEIKKLLIPADPNDKRNIYIELRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+FVGDLF  Y RYA ++ WK+E++SSS +D GGYKEI+A I G  V+SR+K+E+
Sbjct: 117 GGDEAAIFVGDLFNAYVRYADVKGWKIELMSSSPSDAGGYKEIIALIKGEQVYSRLKYEA 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVPATE+ GRVHTSA TVAV+PE  +++V I   D++ID MR+SGSGGQ VNTT
Sbjct: 177 GTHRVQRVPATESQGRVHTSAITVAVMPEVDDVEVTINENDLKIDVMRSSGSGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+VT   EKSQH+N+ +AMK+L+AR+Y+++ +    +  + RK Q+G+
Sbjct: 237 DSAVRITHLPTGIVVTNQDEKSQHKNKDKAMKILKARIYEMQMEEAKVKEMSERKEQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSAS 356
           GDRS RIRTYN+ Q RI+DHRINLTLY+L+ ++QG + DDII PL+   QA+++  A 
Sbjct: 297 GDRSGRIRTYNYPQNRISDHRINLTLYRLDEIMQGGLMDDIIEPLIADAQAQIMERAG 354


>gi|332529974|ref|ZP_08405924.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
 gi|332040447|gb|EGI76823.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
          Length = 369

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 167/369 (45%), Positives = 236/369 (63%), Gaps = 17/369 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +Q+     R  E+   +S       +  ++ L+ E+  ++ I  + + Y Q++ 
Sbjct: 1   MKDFLRQQLERYAQRLDELNFLLSREDIMGDMKQFLALSREHNEVTAIAGRYAQYRQRET 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++ +     ++ D+AQ E+ A   ++  LE+E+  LLLPKD DD ++  LEIR
Sbjct: 61  DLSSAREMLAE----PDMTDIAQEEITAAMADLVRLEDELQRLLLPKDPDDARNAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------ 171
           AGTGG E+ALF  DL RMY RYA  R WK E++S S ++ GGYKE+V  I G        
Sbjct: 117 AGTGGDESALFAADLLRMYTRYADQRGWKTEIMSESPSELGGYKEVVLRIDGGNAESPSG 176

Query: 172 --VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMR 228
             V+  ++FESG HRVQRVPATE  GR+HTSA TVAVLPE  E +   I   ++RIDT R
Sbjct: 177 LGVYGELRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDEQEAVQINPAELRIDTFR 236

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG+GGQH+N TDSAVRITH+PTGI+     ++SQH+N+ +A++VL AR+ + ER   A 
Sbjct: 237 ASGAGGQHINKTDSAVRITHLPTGIVAECQDDRSQHRNKAKALQVLAARIQEKERSERAA 296

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + +A R+  IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  V++G +DD++  L  A 
Sbjct: 297 KDAATRRGLIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLSQVMEGALDDVVQALRHAR 356

Query: 348 QAKMIGSAS 356
           +A+++    
Sbjct: 357 EAELLAELE 365


>gi|225621133|ref|YP_002722391.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1]
 gi|254790865|sp|C0QWA1|RF1_BRAHW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225215953|gb|ACN84687.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1]
          Length = 358

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 162/358 (45%), Positives = 242/358 (67%), Gaps = 3/358 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA--YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                ++  ++  + +I  +++++   D      L ++ + I  I+ +        +E +
Sbjct: 1   MSIIDKLSLVEKTYEDIVQKLNDANIKDNRVIQDLMKKKSEIEDIVEEYKKLKVVLKEIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + + ++ + ++D E++D+A +E+  + ++  ++ N +  LLLPKD +D K+ I+EIR GT
Sbjct: 61  ESNEMVNNPDTDKELKDMALLEIEDLNQKKEDIVNGLRLLLLPKDKNDGKNIIVEIRVGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG E+ALFVGDLFRMY R+      K+E++ +S  + GGYKE++ ++SG+  +  +KFES
Sbjct: 121 GGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSVSGKDAYRTLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQR+PATE+ GR+HTSA+TVAV+PEA E DV I  EDIR+D  R+SG GGQ VNTT
Sbjct: 181 GTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVVIKDEDIRVDIFRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V    EKSQH+N+ +A+KVLRAR+Y+ E      + +  R+ QIGS
Sbjct: 241 DSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKEAKERREQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF Q R+TDHRIN+TLYKL+  + G I +I + L    Q  M+ S S+
Sbjct: 301 GDRSERIRTYNFPQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQEDMLASYSD 358


>gi|254690018|ref|ZP_05153272.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 337

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 206/324 (63%), Positives = 255/324 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 14  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 73

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 74  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 133

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA LF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 134 GGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 193

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 194 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 253

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 254 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 313

Query: 301 DRSERIRTYNFSQGRITDHRINLT 324
           DRSERIRTYNF QGR+TDHRINLT
Sbjct: 314 DRSERIRTYNFPQGRVTDHRINLT 337


>gi|146300064|ref|YP_001194655.1| peptide chain release factor 1 [Flavobacterium johnsoniae UW101]
 gi|189039972|sp|A5FHI8|RF1_FLAJO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146154482|gb|ABQ05336.1| bacterial peptide chain release factor 1 (bRF-1) [Flavobacterium
           johnsoniae UW101]
          Length = 358

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 156/357 (43%), Positives = 230/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF EI   + +   +     Y  L +EY  I  ++ K   Y        +
Sbjct: 1   MLDRLQYVKQRFDEISDLIIQPDVISDQKRYKSLNQEYKGIKALVEKREEYIIVLANIDE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            + +I D  SD+E+ ++A++++   +  + ELE EI ++L+PKD +D K+ ++EIRAGTG
Sbjct: 61  ANEIIAD-GSDAEMVEMAKMQLDEAKDRLPELEEEIKFMLIPKDPEDAKNVMVEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y     W+  V+  ++   GG+KE++  ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYTKYCETMGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV + + D+R+D   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQVDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++     EKSQH+N+ +A+ VLR+RLY++E  +   E +  R  Q+ SG
Sbjct: 240 SAVRLTHIPTGLVAQCQDEKSQHKNKDKALMVLRSRLYEMELAKKQEEDAKKRSSQVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN++QGR+TDHR+ LTLY L  ++ G I  I++ L   +  + +  ASE
Sbjct: 300 DRSAKIRTYNYAQGRVTDHRVGLTLYDLGNIMNGDIQKIVSELQLVNNMEKLKEASE 356


>gi|159899315|ref|YP_001545562.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892354|gb|ABX05434.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 365

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 150/356 (42%), Positives = 230/356 (64%), Gaps = 8/356 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++ R+ E+   M++  ++  +++LT    E   +  ++ +   + Q ++  ++   
Sbjct: 8   RLARVEARYIELNDEMTQPDALSDHVRLTTLAREQTELGELVGRYREFMQAEKSVEEAKA 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ + N D E+R++AQ+E+  +   +  +  E+  LLLP+D +D+K+ I+EIR G GG E
Sbjct: 68  LLREEN-DPELREMAQLEIDELSARMEAIGAEVRVLLLPRDPNDEKNVIIEIRQGEGGDE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  D++RMY+RYA +R WK EV+S S+N  GG+KE++  + G+G +SR+K+E GVHR
Sbjct: 127 AALFGADVYRMYQRYAEIRGWKTEVMSLSENGIGGFKEVIFEVQGQGAWSRLKYEGGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATEA GR+HTS  TVAVLPE  E  V+I  ED RID  R+ G GGQ VNTTDSAV
Sbjct: 187 VQRVPATEARGRIHTSTITVAVLPEVEETAVEIKQEDYRIDVYRSGGHGGQGVNTTDSAV 246

Query: 245 RITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           RI +        ++V    +SQ +NR  A+ VLRARLY  E+++   E   +R  Q+GSG
Sbjct: 247 RIVYKAGTPEEIVVVCQDTRSQIKNRESALNVLRARLYAREQEKRQKELGESRLAQVGSG 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +R+E++RTYN+ Q RITDHRI   +  L  VL G +D +I+ L+T   A+ + +  
Sbjct: 307 ERAEKMRTYNYPQDRITDHRIGQNISNLPVVLDGALDRLIDALVTFDNAERLKALG 362


>gi|89890298|ref|ZP_01201808.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7]
 gi|89517213|gb|EAS19870.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7]
          Length = 358

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 154/357 (43%), Positives = 229/357 (64%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +KNRF E+   + +   +     Y++LT+EY  +  ++     Y        +
Sbjct: 1   MIDKLNIVKNRFDEVNDLIIQPDIISDQKRYVQLTKEYKDLKALMEVREEYMTLTANLDE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +I D  SD+++ ++AQ++    ++ I ELE +I  +L+PKD +D K+ ++EIRAG G
Sbjct: 61  AKEIIAD-GSDADMVEMAQMQYDEAKEAIPELEEKIRMMLVPKDPEDAKNAVMEIRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMYE+Y + + W   V+ +S    GGYKEI+  ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYEKYCSSKGWSTSVVDTSHGTSGGYKEIILEVNGEDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV++ + ++RI+   ++G GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVELDMTEVRIERTTSTGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+++ H PTG++V    +KS H+N  +A+KVLR+RLY++E  +     S  RK  + SG
Sbjct: 240 SAIKLHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYEMELAKKMEADSEKRKSMVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+SQGR+TDHRINLTLY L+ ++ G I  II+ L      + +    E
Sbjct: 300 DRSAKIRTYNYSQGRVTDHRINLTLYDLDNIINGDIQKIIDELQLVDNTEKLKMTDE 356


>gi|329121081|ref|ZP_08249712.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
           19965]
 gi|327471243|gb|EGF16697.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
           19965]
          Length = 359

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 251/354 (70%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++NR+  +E ++S+   ++    + K ++E+A +  I++    Y +  + +    
Sbjct: 4   DKLQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVVETQNAAL 63

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D N + E+ +LA+ ++   EKEI +LE++++ LL+PKD +D ++ ILEIRAGTGG 
Sbjct: 64  EILNDKNQE-ELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFV DL +MY ++A  RKWK  ++  ++ D GGY+E++ TI G   +S +KFESGVH
Sbjct: 123 EAALFVADLLKMYLKFAEHRKWKCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+SGRVHTSA TVAVLPEA ++D++I  EDIR+D  RASG+GGQH+N T SA
Sbjct: 183 RVQRIPETESSGRVHTSAVTVAVLPEAEDVDIEISKEDIRVDVYRASGAGGQHINKTSSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V   +E+ Q QNR +AM++L+ARLYD   ++  +E + NRK Q+GSGDR
Sbjct: 243 IRITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRKTKSETAQNRKEQVGSGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ QGRITDHRI +++Y+++  + GY++ II+ L+ A     I    
Sbjct: 303 SERIRTYNYPQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEADLNLKIKEGE 356


>gi|268678716|ref|YP_003303147.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616747|gb|ACZ11112.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 355

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 171/358 (47%), Positives = 249/358 (69%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++    +R+ E+ + +S+    +   K   L++E + + PI  K   Y    ++ +
Sbjct: 1   MLKEKLLPFLDRYNELTMLLSDPNVSNDIKKMTALSKEQSNLEPIKEKTLEYFSTLEQIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +          D E+ +LA+ E+  +E     LE+EI  LLLPKD +D+++  LEIRAGT
Sbjct: 61  ENR----FLLEDEELGELAKEELKLLEPHKEILEDEIKLLLLPKDPNDERNIFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+F  DLF+ Y RYA  R WKVEV+S S+    GYKE++A I G+G FSR+K+E 
Sbjct: 117 GGDEAAIFAADLFKSYLRYAENRGWKVEVVSLSEGVLNGYKEVIALIKGQGAFSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GRVHTSA TVAV+PE  +++VDI  +D++ID MR+SG+GGQ VNTT
Sbjct: 177 GVHRVQRVPLTESQGRVHTSAVTVAVMPEVDDVEVDIQEKDLKIDVMRSSGNGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V     KSQH+N+  AMK+L+A+LYD++ +    + S  RK Q+GS
Sbjct: 237 DSAVRITHLPTGIVVVNQDGKSQHKNKDAAMKILKAKLYDMQMQERNAKESEARKQQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSAS 356
           GDRS RIRTYN+ Q RITDHR+ LTLY+L+ +++G + D++I+P++T +QA+++  A+
Sbjct: 297 GDRSARIRTYNYPQNRITDHRVGLTLYRLDAIMEGGLYDELIDPIITHYQAELMKEAN 354


>gi|300172696|ref|YP_003771861.1| peptide chain release factor 1 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887074|emb|CBL91042.1| Peptide chain release factor 1 [Leuconostoc gasicomitatum LMG
           18811]
          Length = 357

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 141/360 (39%), Positives = 220/360 (61%), Gaps = 9/360 (2%)

Query: 3   FLSHKQ-ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQE 58
                Q +  + +R+ E+  ++++         Y+ L +E   +   +   + Y Q  Q 
Sbjct: 1   MDPIFQSLQTVVDRYDELNEQLADPDVAGDGQQYMALLKEAGEMRETVEVYTHYQQVMQG 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             D   ++     D+E+  LA+ ++  ++ E   LE+++  L+LPKD +DDK+ I+EIR 
Sbjct: 61  ISDAEDML----DDAEMAPLAKEDLNTLKPEKIVLEDQLKILMLPKDPNDDKNIIMEIRG 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E++LF  DL  MY RYA  ++W V ++  +  + GGYKE+   I+G  V+S++KF
Sbjct: 117 AAGGDESSLFAADLLDMYRRYAEKQRWVVSIIDETITEVGGYKEVAIMITGDNVYSKLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVP+TE  GRVHTS ATV V+PE  EID ++   D+  +  R+ G+GGQ+VN
Sbjct: 177 ESGAHRVQRVPSTETQGRVHTSTATVGVMPEFEEIDFELAESDLEEEFFRSGGAGGQNVN 236

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
              +AVR+ H PTGIMV    E++Q +NR +A K+L +R+YD   ++   E +  RK  +
Sbjct: 237 KVSTAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           G+GDRSERIRTYN+ Q R+TDHRI LTL KL+ ++ G + +I++ L+ A Q   +   ++
Sbjct: 297 GTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGEIVDALVIADQTAKLAELNQ 356


>gi|313891751|ref|ZP_07825356.1| peptide chain release factor 1 [Dialister microaerophilus UPII
           345-E]
 gi|313119745|gb|EFR42932.1| peptide chain release factor 1 [Dialister microaerophilus UPII
           345-E]
          Length = 359

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 252/354 (71%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++NR+  +E ++S+   ++    + K ++E+A +  I++    Y +  + +    
Sbjct: 4   EKLQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVFETKNAAL 63

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D N + E+ +LA+ ++   EKEI +LE++++ LL+PKD +D ++ ILEIRAGTGG 
Sbjct: 64  EILNDKNQE-ELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFV DL +MY ++A  RKW+  ++  ++ D GGY+E++ TI G   +S +KFESGVH
Sbjct: 123 EAALFVADLLKMYLKFAEHRKWRCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P TE+SGRVHTSA TVAVLPEA ++D++I  EDIR+D  RASG+GGQH+N T SA
Sbjct: 183 RVQRIPETESSGRVHTSAVTVAVLPEAEDVDIEISKEDIRVDVYRASGAGGQHINKTSSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+PTGI+V   +E+ Q QNR +AM++L+ARLYD   ++  +E + NRK Q+GSGDR
Sbjct: 243 IRITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRKTKSETAQNRKEQVGSGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SERIRTYN+ QGRITDHRI +++Y+++  + GY++ II+ L+ A     I    
Sbjct: 303 SERIRTYNYPQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEADLNLKIKEGE 356


>gi|91217382|ref|ZP_01254342.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755]
 gi|91184490|gb|EAS70873.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755]
          Length = 358

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 150/357 (42%), Positives = 234/357 (65%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K RF E+   + +   +     YI+L++EY  +  I+ +  IY +     ++
Sbjct: 1   MLDKLNFIKQRFDEVSDLIIQPDIMSNQKRYIELSKEYKDLKAIMDEREIYIELTDNLKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            + +I  + SD+E+ ++A+++    + E+  LE +I  +L+PKD +D K+ ++E+RAG G
Sbjct: 61  ANDIIS-NESDAEMVEMAKLQYDEAKVELPNLEEKIRMMLIPKDPEDAKNAVVEVRAGAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GD+FRM  +Y   + WKV+V+  ++  +GGYKEI   +SG  V+  +K+E+G
Sbjct: 120 GDEASIFAGDIFRMLSKYCEHKGWKVDVVDYNEGTNGGYKEIQFEVSGDDVYGTLKYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV V PEA E D+++  +++R+D   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVFPEAEEFDIEVNPKEVRVDYFCSSGPGGQSVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTGI+     +KSQH+N+ +A +VLR+RLY++E  +   E +  R   + SG
Sbjct: 240 SAVRLTHEPTGIVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKKQAEDAEKRGSMVTSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS +IRTYN+SQ R+TDHRINLTLY L+ ++ G ++ IIN L      + + + S+
Sbjct: 300 DRSAKIRTYNYSQSRVTDHRINLTLYDLDNIINGDLEKIINELKLVDNTEKLKNISD 356


>gi|221068955|ref|ZP_03545060.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
 gi|299531475|ref|ZP_07044881.1| peptide chain release factor 1 [Comamonas testosteroni S44]
 gi|220713978|gb|EED69346.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
 gi|298720438|gb|EFI61389.1| peptide chain release factor 1 [Comamonas testosteroni S44]
          Length = 359

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 232/352 (65%), Gaps = 9/352 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S       +  Y  ++ E+A ++ I S+ + Y Q + 
Sbjct: 1   MQDFLRNQLERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ ++AQ E+ + E E+ +LE+E+  LLLPKD DD +   +EIR
Sbjct: 61  DIAAAREML----DDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYAA   WKVEV+S+S+N+ GGYKE+V  I G  V+  ++
Sbjct: 117 AGTGGDESALFAGDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PE  E +       D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A + +A RK 
Sbjct: 237 INKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAAMRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  V++G + D+I  L  A 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAVMEGDLGDVIQALQHAR 348


>gi|1526559|dbj|BAA08795.1| peptide termination factor [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 370

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 153/349 (43%), Positives = 230/349 (65%), Gaps = 5/349 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  ++ R  +I+  + +      +  + +L +E A +  ++ K   Y +     +D  
Sbjct: 7   EALETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAK 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ ++  DSE+ +LA+IE+     ++  L+  I  +LLPKD +D+K+ I+EIR   GG 
Sbjct: 67  AIL-ENEKDSELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIIEIRGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDL RMY+ YA  + WK+ +L +S  + GGY ++V  I G  V+S++KFESG H
Sbjct: 126 EANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+ TS ATVAVLPE +E++++I   D+RIDT RASG+GGQHVNTTDSA
Sbjct: 186 RVQRVPKTEAKGRIQTSTATVAVLPEMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V +   +SQH N+  AM +LRA++Y+ E ++   +  A RK  +G+G R
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGAR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           SE+ RTYN+ Q R+TDHR+ LTL KL+ V++G ID+ I  L+   Q + 
Sbjct: 306 SEKFRTYNYPQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQRQK 354


>gi|284050702|ref|ZP_06380912.1| peptide chain release factor 1 [Arthrospira platensis str. Paraca]
 gi|291567816|dbj|BAI90088.1| peptide chain release factor 1 [Arthrospira platensis NIES-39]
          Length = 371

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 141/358 (39%), Positives = 230/358 (64%), Gaps = 8/358 (2%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  F E+ LR+++       D + ++ +  +++  +++    +   + E     
Sbjct: 8   DKLKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQEWKTTQTELAGAK 67

Query: 64  TVIGDHNSDSE---IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            ++ +  +D E   ++++A +EV  +  +++ELE  +  LLLP+D +DDK+ +LEIRAGT
Sbjct: 68  QILRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIMLEIRAGT 127

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+++ GDL RMY RYA  + W+V +LS S  D GG+KE +  I G  V+S++KFE+
Sbjct: 128 GGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGDRVYSQLKFEA 187

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GRVHTS ATVA++PE  +++V I  +DI + T R+ G+GGQ+VN  
Sbjct: 188 GVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDAKDIEMTTARSGGAGGQNVNKV 247

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AV + H PTGI +  + E+SQ +NR RAM++LRA+LY+ + +   +  ++ R+ Q+G+
Sbjct: 248 ETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKLREQQDAVTSMRRSQVGT 307

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           G RSE+IRTYN+   R+TDHR+      L  VL+G I D+I   +   Q + +   +E
Sbjct: 308 GSRSEKIRTYNYKDNRVTDHRLGHNFS-LAPVLEGGIGDLIQACVIQDQQERLAQLAE 364


>gi|309390220|gb|ADO78100.1| bacterial peptide chain release factor 1 (bRF-1) [Halanaerobium
           praevalens DSM 2228]
          Length = 360

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 157/352 (44%), Positives = 239/352 (67%), Gaps = 5/352 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISP---IISKISIYDQKKQEEQDL 62
             ++  L  ++ ++  ++S+   ++   K  +     +    I+ K   Y   K+   + 
Sbjct: 8   ESKLDKLVAKYKQMNKKLSDPEVINDSDKYQKLLKKHAKLKKIVDKYKEYKAAKEGIAEA 67

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ + + D E++ L + E+  ++ +  +L+ ++  +LLP D +D+K+ I+EIRAG GG
Sbjct: 68  EEMM-ELDDDPEMQALFEEEIAELKPKKEKLQEQLPIMLLPDDPNDEKNVIVEIRAGAGG 126

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL+RMY RYA  + WKV+++S++++  GG+KEI+ TI G  +F  +K+ESGV
Sbjct: 127 DEAALFAADLYRMYTRYAEGKGWKVDLMSANESGTGGFKEIIFTIEGTDIFKYLKYESGV 186

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP+TE+SGR+HTS ATVAVLPEA E+DV+I   D+ IDT R+SG GGQ VNTTDS
Sbjct: 187 HRVQRVPSTESSGRIHTSTATVAVLPEAEEVDVEIETNDLTIDTFRSSGPGGQSVNTTDS 246

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITH PTG+ V    EKSQH+N+ +AMK+LRARL + + +    ERS  RK Q+G+GD
Sbjct: 247 AIRITHEPTGLTVSCQDEKSQHKNKAKAMKILRARLQEKKEQEKQKERSEARKSQVGTGD 306

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           RSE+IRTYNF QGR++DHRINLT+++L+ +L G ++ ++  L+     K + 
Sbjct: 307 RSEKIRTYNFPQGRVSDHRINLTIHQLDKILDGELEPVVEALIEEDNNKRLE 358


>gi|116491555|ref|YP_811099.1| peptide chain release factor 1 [Oenococcus oeni PSU-1]
 gi|290891160|ref|ZP_06554222.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
 gi|116092280|gb|ABJ57434.1| bacterial peptide chain release factor 1 (bRF-1) [Oenococcus oeni
           PSU-1]
 gi|290479124|gb|EFD87786.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
          Length = 357

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 221/354 (62%), Gaps = 10/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           QI ++ +R+ E+   +++         Y +  +E   I+PI+     Y Q   E  D   
Sbjct: 7   QIQNVVDRYDELNELLADPDVASDSGKYTRYAKELGEITPIVENYRRYQQLTNEINDDKE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D E+  LA+ E+  +E E  EL  ++  L++PKD +DDK+ I+EIR   GG E
Sbjct: 67  LL----NDKEMASLAKKELSELEPEQSELSEKLRVLMIPKDPNDDKNIIMEIRGAVGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF GDL  MY  YA  + W  E++  +  + GG+KE V  ISG  V+S++KFESG HR
Sbjct: 123 ANLFAGDLLNMYAHYAQSQNWSFEIVDQTVGEAGGFKEAVINISGENVYSKLKFESGAHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDS 242
           VQRVP TE  GRVHTS ATV V+PE  +ID +  I  +D+R D  R+SG+GGQH+N T S
Sbjct: 183 VQRVPVTETQGRVHTSTATVGVMPEFEDIDTEGLIDPKDVREDVYRSSGAGGQHINKTSS 242

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+ H+PTGI V    ++SQ QNR +A ++LR+R+YD   +    +    R+ +IGSGD
Sbjct: 243 AVRLVHLPTGIKVEMQEQRSQQQNRSKAWQILRSRVYDHFAQENREQYDQQRRTKIGSGD 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           RSERIRTYNF Q R+TDHRIN TL KL+ V+ G +++II+ L+ A Q K +   
Sbjct: 303 RSERIRTYNFPQNRVTDHRINFTLNKLDKVINGDLEEIIDALIIADQTKRLEEM 356


>gi|260755553|ref|ZP_05867901.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
 gi|260675661|gb|EEX62482.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 342

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 206/324 (63%), Positives = 255/324 (78%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 19  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 78

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILEIRAGT
Sbjct: 79  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGT 138

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA LF GDLFRMYERYAA + W+VE++S+S+ D GGYKEI+AT+SG+GVFS++KFES
Sbjct: 139 GGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFES 198

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA +ID++I  EDIRIDTMRASG+GGQHVNTT
Sbjct: 199 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQHVNTT 258

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           DSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  +ERS  R+ Q+GSG
Sbjct: 259 DSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSG 318

Query: 301 DRSERIRTYNFSQGRITDHRINLT 324
           DRSERIRTYNF QGR+TDHRINLT
Sbjct: 319 DRSERIRTYNFPQGRVTDHRINLT 342


>gi|254446350|ref|ZP_05059826.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235]
 gi|198260658|gb|EDY84966.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235]
          Length = 408

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 156/361 (43%), Positives = 237/361 (65%), Gaps = 7/361 (1%)

Query: 2   VFLSHKQICDL---KNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQK 55
           +     ++ ++   K R  EI+  MS         +   L+ E   +  +I      D+ 
Sbjct: 41  ILFMAIKLPEISPFKARVEEIDGLMSAPDFYSDARRSAALSREQIKLRQLIEDYDALDKA 100

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           KQ+  +   ++ D + D+E+++LA++E+  +E+++ +LE +I   ++P D  D ++ I+E
Sbjct: 101 KQQLAENQEMLDDSSGDAELKELAEMEIPELEEKVEKLEEKILKAMIPPDETDSRNTIVE 160

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           IRAG GG EA+LF  DL+RMY R A  + W+VE +S+S++   G+KE++ +I+G  V+ +
Sbjct: 161 IRAGAGGDEASLFAADLYRMYTRLAERKGWRVEQMSASESGIDGFKEVIFSITGEEVYKK 220

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           +K ESGVHRVQRVP TE+ GR+HTS ATVAVLPEA E+DV+I  +D+ + T RASG+GGQ
Sbjct: 221 LKLESGVHRVQRVPETESQGRIHTSTATVAVLPEAEEVDVEINPQDLEVTTCRASGAGGQ 280

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTTDSA+ I H PTGI V  + E+SQ +NR +AMKVL +R+  V+++   ++ + NRK
Sbjct: 281 HVNTTDSAINIVHKPTGITVYCADERSQIKNRAKAMKVLYSRILQVKQEEERSKYAENRK 340

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            Q+G+GDRSERIRTYNF Q R+TDHRI LTL+ L  V+ G +++I+  L        I +
Sbjct: 341 KQVGTGDRSERIRTYNFPQSRLTDHRIGLTLHSLPAVMDGDMEEILETLENEDMRLKIDA 400

Query: 355 A 355
            
Sbjct: 401 L 401


>gi|257064123|ref|YP_003143795.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia
           heliotrinireducens DSM 20476]
 gi|256791776|gb|ACV22446.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia
           heliotrinireducens DSM 20476]
          Length = 352

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 159/357 (44%), Positives = 227/357 (63%), Gaps = 12/357 (3%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +   + E+E ++ +   +     Y +L++EY+   P++ K   Y Q  ++  D
Sbjct: 1   MRDKLSKIVAGYKELEQKLGDPAVLADQKEYTRLSKEYSKQGPLVEKAREYLQACEDIDD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             +++G    D+++R+ AQ  +   E ++  LE +I ++L+P+D  D+K  I+EIR   G
Sbjct: 61  AKSMLG----DADMREFAQETIAECEAKLPGLEEDIKFMLIPEDPADEKDIIVEIRGAAG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDL++MY R+   ++WK+E +  S ++ GGYKEI   + G  V+S MKFESG
Sbjct: 117 GDEAAIFAGDLYKMYARFCESQRWKIETMDVSASEAGGYKEIQFKVKGDHVYSLMKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPEA EIDV+I   D+RID  RA G GGQ VNTTD
Sbjct: 177 VHRVQRVPKTESQGRIHTSTATVAVLPEADEIDVEINENDLRIDVYRAGGPGGQCVNTTD 236

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+P+G++V +  +KSQ QN++ AM VLR+RLY+           A R  QIGSG
Sbjct: 237 SAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRSRLYEKMLAEQQAAEGAERLAQIGSG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DR+E+IRTYN  Q R+TDHRI     Y    VL G  + D+I  L  A +A+ +  A
Sbjct: 297 DRAEKIRTYNAPQDRVTDHRIGYNGTYN--GVLLGDGLGDLITALQAADRARKLEQA 351


>gi|269468531|gb|EEZ80185.1| Protein chain release factor A [uncultured SUP05 cluster bacterium]
          Length = 363

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 165/355 (46%), Positives = 241/355 (67%), Gaps = 7/355 (1%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E+   +S+       + + +L+ E+A ++PI  +   Y   +++ +   +
Sbjct: 8   KLEQLSMRLEEVGALLSDPDVAADQNKFRELSIEHAQLTPINEQFEKYLSTQKDIE--SS 65

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
                  D EI+ +A+ E+   ++++  L+ E+   LLPKD +D ++ I+EIRAGTGG E
Sbjct: 66  EEMLLEDDEEIKTMAKEEITEGKEKLEYLDLELKKALLPKDPNDSRNIIIEIRAGTGGDE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A++F GDLFRMY RY   +KW++E +SS+  D GG+KE++A ISG  V+S++KFESG HR
Sbjct: 126 ASIFSGDLFRMYSRYVEKQKWQMEAMSSNIGDHGGFKEVIARISGTNVYSKLKFESGAHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GRVHTSA TVA++PE   I+  DI + D+RIDT RASG+GGQHVN TDSA
Sbjct: 186 VQRVPETESQGRVHTSACTVAIMPEVENIEEVDINMSDVRIDTFRASGAGGQHVNKTDSA 245

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTG +V     +SQH+N+ +A+ VL +R+ D +++    E++  RK  IGSGDR
Sbjct: 246 VRVTHIPTGTVVECQDGRSQHKNKAQALSVLASRILDAQQQEQQKEQALTRKELIGSGDR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+RIRTYN+ QGRITDHRINLTLYKL  V++G ++ II PL+   Q   +   ++
Sbjct: 306 SQRIRTYNYPQGRITDHRINLTLYKLAEVMEGDLEAIIEPLIVEQQTNQLTELND 360


>gi|29840418|ref|NP_829524.1| peptide chain release factor 1 [Chlamydophila caviae GPIC]
 gi|33301431|sp|Q822M2|RF1_CHLCV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29834767|gb|AAP05402.1| peptide chain release factor 1 [Chlamydophila caviae GPIC]
          Length = 361

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 168/359 (46%), Positives = 237/359 (66%), Gaps = 7/359 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             K+I +   R  E+E+++S     +   +   L++E+A +S + +       +++   D
Sbjct: 1   MEKKILEYLKRLEEVEVKISNPEIFENPKEYSSLSKEHARLSELKNVYDKVLGQEKILND 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               +     D E+  + +  +   + E+ +L   +  LL+P D DDD + I+E+RAGTG
Sbjct: 61  DKEALAQEK-DPEMIAMLEEGIQLGKAEVDKLYKVLENLLVPPDPDDDLNVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YA+ + WK EVLS+S++D GGYKE V  ISG  V   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYASTKGWKYEVLSASESDIGGYKEYVMGISGAAVKRLLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D +  I  +D++IDT RASG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQH+N+ +AM++L+AR+ D E +R   E SA R  Q+G
Sbjct: 240 TDSAVRITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRQKEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNFSQ R+TDHRI LTLY L+ V++G +D I + L++    +++   +E
Sbjct: 300 SGDRSERIRTYNFSQNRVTDHRIGLTLYNLDKVMEGDLDAITSALVSHAYHQLLQHGNE 358


>gi|302334925|ref|YP_003800132.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM
           7084]
 gi|301318765|gb|ADK67252.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM
           7084]
          Length = 355

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 162/356 (45%), Positives = 230/356 (64%), Gaps = 7/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L   + E+E RM +   V     Y ++ +E+A+ + +++K   Y     + + 
Sbjct: 1   MRDKLEKLIAAYEELEKRMVDPTVVSDPKEYARIAKEHASQAELVAKAREYVGALDDIEV 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +     SD+  +++ Q ++ A E ++  LE+EI  +L+P D +D+K+ I+EIRAG G
Sbjct: 61  AKEM-QRETSDASEKEMLQEDIGANEAKLPALEDEIKVMLIPGDPNDEKNTIVEIRAGVG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDL+ MY R+A+  KWK EVLSSS ++ GG+K I   ++G  VFS MKFESG
Sbjct: 120 GDEAAIFAGDLYNMYARFASTHKWKTEVLSSSPSEAGGFKTIEFKVTGDKVFSVMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE+ GR+ TS ATVAVLPEA EID++I  ED+RIDT  ASG GGQ VNTT 
Sbjct: 180 VHRVQRIPKTESQGRIQTSTATVAVLPEADEIDIEIKDEDLRIDTYCASGPGGQCVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY+VE ++   E+ A R  QIG G
Sbjct: 240 SAVRITHLPTNTVVQSQDQRSQIQNRAVCMEMLRARLYEVELEKQQAEQGAARLGQIGHG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
            R+E+IRTYN  Q R+TDHRI         VL G  + ++I+ L  A +A+ +  A
Sbjct: 300 SRAEKIRTYNQPQDRVTDHRIGFNSTY-NGVLLGDRLPEVIDALAAAERAEKLARA 354


>gi|40062805|gb|AAR37689.1| peptide chain release factor 1 [uncultured marine bacterium 440]
          Length = 359

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 172/356 (48%), Positives = 243/356 (68%), Gaps = 3/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  +++  + + +  +E++++        ++K ++EY++I  +I++   Y   ++E+ +
Sbjct: 1   MIPIEKVKLIVDTYKTLEIQLASGNISKKDFVKKSKEYSSIGEVINQAKGYLSFEKEKIE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +I D  SD E+  LA+ E+  + ++ +  E  +   LLPKD  D K+ ILEIRAGTG
Sbjct: 61  LEKIIEDKESDEEMVQLAKKELNELLEKNKTHEKILRIYLLPKDGADAKNAILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LFV DL++MYE+     KW  E++S S +  GG+KE++  I G  ++S +K+E G
Sbjct: 121 GDEAGLFVADLYKMYEKVCLNNKWSFEIISISKSGAGGFKEVILLIKGNNIYSFLKYERG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+D+ I  +D+RID  R++GSGGQ VNTTD
Sbjct: 181 VHRVQRVPKTETQGRVHTSAATVAVLPEAEEVDIKIQEKDLRIDVYRSTGSGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTGI+VT   EKSQH+NR + MK+LR+R+Y+ ER++   ERS +RK QIGSG
Sbjct: 241 SAVRITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRVYEAEREKKDKERSKDRKNQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRIN+TL+KL+  L G    ++   L    Q   + S 
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINVTLHKLKEFLSGDAFGELNQNLRLQDQKIKLASL 356


>gi|329943005|ref|ZP_08291779.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10]
 gi|332287587|ref|YP_004422488.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
 gi|313848161|emb|CBY17162.1| peptide chain release factor 1 [Chlamydophila psittaci RD1]
 gi|325506915|gb|ADZ18553.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
 gi|328814552|gb|EGF84542.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10]
 gi|328914838|gb|AEB55671.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
          Length = 361

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 169/358 (47%), Positives = 238/358 (66%), Gaps = 7/358 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             K+I +   R  E+E ++S     D   +   L++E+A +S + +       +++   D
Sbjct: 1   MQKKILEYLKRLEEVEAKISNPEIFDNPKEYSLLSKEHARLSELKNTYDRVVAQEKILSD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               +     D E+  + +  + + + E+ +L   +  LL+P D DDD + I+E+RAGTG
Sbjct: 61  DKQALAQEK-DPEMIAMLEEGIQSGKAEVDKLYKILENLLVPPDPDDDLNVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YA+ + WK EVLS+S++D GGYKE V  ISG GV   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D +  I  +D++IDT RASG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAITVAVLPEPAENDEEVFIDEKDLKIDTFRASGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQH+N+ +AM++L+AR+ D E +R   E SA R  Q+G
Sbjct: 240 TDSAVRITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNFSQ R+TDHRI LTLY L+ V++G +D I + L++    +++ + +
Sbjct: 300 SGDRSERIRTYNFSQNRVTDHRIGLTLYSLDKVMEGDLDTITSALVSHAYHQLLQNGN 357


>gi|62185243|ref|YP_220028.1| peptide chain release factor 1 [Chlamydophila abortus S26/3]
 gi|81312600|sp|Q5L5L4|RF1_CHLAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62148310|emb|CAH64077.1| peptide chain release factor 1 [Chlamydophila abortus S26/3]
          Length = 361

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 169/359 (47%), Positives = 239/359 (66%), Gaps = 7/359 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             K+I +   R  E+E+ +S     +   +   L++E+A +S + +       +++   D
Sbjct: 1   MQKKILEYLKRLEEVEVEISNPEIFNNPKEYSLLSKEHARLSELKNTYDRVMAQEKVLSD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               +     D E+  + +  + + + E+ +L   +  LL+P D DDD + I+E+RAGTG
Sbjct: 61  DKQALAQEK-DPEMIAMLEEGIQSGKAEVEKLYKILENLLVPPDPDDDLNVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YA+ + WK EVLS+S++D GGYKE V  ISG GV   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D +  I  +D++IDT RASG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQH+N+ +AM++L+AR+ D E +R   E SA R  Q+G
Sbjct: 240 TDSAVRITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEIQRRHKEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNFSQ R+TDHRI LTLY L+ V++G +D I + L++    +++ + +E
Sbjct: 300 SGDRSERIRTYNFSQNRVTDHRIGLTLYSLDKVMEGDLDTITSALVSHAYHQLLQNGNE 358


>gi|255348385|ref|ZP_05380392.1| peptide chain release factor 1 [Chlamydia trachomatis 70]
 gi|255502926|ref|ZP_05381316.1| peptide chain release factor 1 [Chlamydia trachomatis 70s]
 gi|255506595|ref|ZP_05382234.1| peptide chain release factor 1 [Chlamydia trachomatis D(s)2923]
 gi|289525068|emb|CBJ14538.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           Sweden2]
 gi|296434608|gb|ADH16786.1| peptide chain release factor 1 [Chlamydia trachomatis E/150]
 gi|296438326|gb|ADH20479.1| peptide chain release factor 1 [Chlamydia trachomatis E/11023]
          Length = 359

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 173/348 (49%), Positives = 230/348 (66%), Gaps = 7/348 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
              ++ +   R  E+E ++S+        +   L++E+A +S I +        K+  QD
Sbjct: 1   MEIKVLECLKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D EI  + +  VL  E+ +  L  ++  LL+P D DDD S I+E+RAGTG
Sbjct: 61  -DKLALSTEKDPEIVAMLEEGVLVGEEAVEHLSKQLENLLIPPDPDDDLSVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YAA + W+ EVLS+S++D GGYKE V  ISG  V   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D +  I  +D+RIDT R+SG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIP+G++V    E+SQH+N+ +AM+VL+AR+ D E ++ A E SA R  Q+G
Sbjct: 240 TDSAVRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           SGDRSERIRTYNF Q R+TDHRI LTLY L+ V++G +D I   L+T 
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRIGLTLYNLDRVMEGELDMITTALVTH 347


>gi|237802457|ref|YP_002887651.1| peptide chain release factor 1 [Chlamydia trachomatis B/Jali20/OT]
 gi|231273691|emb|CAX10469.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 359

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 172/348 (49%), Positives = 229/348 (65%), Gaps = 7/348 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
              ++ +   R  E+E ++S+        +   L++E+A +S I +        K+  QD
Sbjct: 1   MEIKVLECLKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D EI  + +  VL  E+ +  L  ++  LL+P   DDD S I+E+RAGTG
Sbjct: 61  -DKLALSTEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPHPDDDLSVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YAA + W+ EVLS+S++D GGYKE V  ISG  V   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D +  I  +D+RIDT R+SG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIP+G++V    E+SQH+N+ +AM+VL+AR+ D E ++ A E SA R  Q+G
Sbjct: 240 TDSAVRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           SGDRSERIRTYNF Q R+TDHRI LTLY L+ V++G +D I   L+T 
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRIGLTLYNLDRVMEGELDMITTALVTH 347


>gi|255534225|ref|YP_003094596.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium
           3519-10]
 gi|255340421|gb|ACU06534.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium
           3519-10]
          Length = 361

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 145/361 (40%), Positives = 227/361 (62%), Gaps = 6/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +K R+ E+   + +   +    K   L +EY+ +  I+S    Y Q   
Sbjct: 1   MSKSLIPKLEAIKQRYNEVADLIIQPDIISDQKKYSALNKEYSDLGKIVSVFDQYTQAIN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   +I D  SD E  ++A++E     ++I ++E E+  LL+PKD  DDK+ I+E+R
Sbjct: 61  SIAESDEIIAD-GSDKEFVEMAKMEKNEALEKIPQIEEELKVLLIPKDPADDKNVIVELR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+FV D++R Y  +   + WK E+  +++    GYKE++  + G GV+  MK
Sbjct: 120 AGTGGDEAAIFVEDVYRAYAMFFKTKGWKHEITDANEASK-GYKELILKVEGEGVYGIMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQRVP TE+ GRVHTSA TVAVLPEA E+D ++   DI + T R+ G+GGQ+V
Sbjct: 179 FESGVHRVQRVPETESQGRVHTSAITVAVLPEAEEVDFELNPADIEMQTSRSGGAGGQNV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N  ++ V++TH P+G++V     +SQ  NR  AM++LR +LYD+E +R+  + +A RK  
Sbjct: 239 NKVETKVQLTHKPSGMVVVCQQARSQLANRELAMEMLRTKLYDIELQRVQGDIAAQRKTM 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + +GDRS +I+TYN+ QGR+TDHR+N ++Y L+  + G I ++I+ ++ A  A+ +    
Sbjct: 299 VSTGDRSAKIKTYNYPQGRVTDHRVNKSVYNLDAYMNGDIQEMIDAVIMAENAEKMKGEE 358

Query: 357 E 357
           E
Sbjct: 359 E 359


>gi|149174661|ref|ZP_01853286.1| peptide chain release factor 1 [Planctomyces maris DSM 8797]
 gi|148846355|gb|EDL60693.1| peptide chain release factor 1 [Planctomyces maris DSM 8797]
          Length = 360

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 154/349 (44%), Positives = 231/349 (66%), Gaps = 6/349 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +    +R+ E+E  + +   +    KL     EY  ++ +   +  ++ + ++ +    +
Sbjct: 6   LQVKLDRYEELEKELQDPEVLANTSKLVEIQREYGGLAKVALAVREFNTRAEDIEVAREM 65

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  +D   R+ AQ E+  + +E  +   E+  L++  D+      I+EIRAG GG EA
Sbjct: 66  L-EEETDPAAREYAQKELDELCEEHEKHIKELEDLVVAGDSITRGGLIMEIRAGAGGDEA 124

Query: 126 ALFVGDLFRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           ALF  +LF MY  +    + WK EVL+ S  + GG KE+  +I+G G + R++FESG HR
Sbjct: 125 ALFARELFDMYMHFVEAQKGWKTEVLNMSATELGGLKEVTFSIAGEGAYHRLQFESGGHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTSAATVAVLPEA+E++VDI  +DIR+DT  ASG GGQ VN T+SAV
Sbjct: 185 VQRVPETETQGRVHTSAATVAVLPEASEVEVDIKPDDIRLDTFHASGPGGQKVNKTESAV 244

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTG +V    EKSQH+N+ +AM+VLR+R+ +  +++ A+ER+  R+  IGSGDRS
Sbjct: 245 RITHLPTGTVVQCQDEKSQHKNKAKAMRVLRSRVLEQMQQKAADERADQRRTLIGSGDRS 304

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           +RIRTYNF QGR+TDHRINL+LYK++ ++QG ++D+I+ LL   + + +
Sbjct: 305 QRIRTYNFPQGRVTDHRINLSLYKIDQIMQGDLNDLISALLQFDREERL 353


>gi|302536943|ref|ZP_07289285.1| peptide chain release factor 1 [Streptomyces sp. C]
 gi|302445838|gb|EFL17654.1| peptide chain release factor 1 [Streptomyces sp. C]
          Length = 359

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 150/363 (41%), Positives = 220/363 (60%), Gaps = 21/363 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + DL    A++E ++++           KL + YA ++PI++    + Q  ++ +   
Sbjct: 3   EAVEDLVGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRAWKQSAEDIETAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             E   +  +  EL  ++  LL+P+D  DDK  +LEI+AG GG 
Sbjct: 63  ELAADDPD-------FAAEAKELSAQREELTEKLRLLLVPRDPSDDKDVLLEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++  ++            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVSVRTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +RMK+E GVHRVQRVPATE+ GR+HTSAA V V PEA E++V+I + D+RID  R+SG G
Sbjct: 176 ARMKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVEVEINMNDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITHIPTG++    +EKSQ QN+ +AM++LR+RL    ++    E S  
Sbjct: 236 GQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDQ 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           R+ Q+ S DRSE+IRTYNF + RI+DHR     Y L+ VL G +D +I   +    A  +
Sbjct: 296 RRSQVRSVDRSEKIRTYNFPENRISDHRTGFKAYNLDQVLDGDLDSVIQACVDTDSAAKL 355

Query: 353 GSA 355
            +A
Sbjct: 356 AAA 358


>gi|264676913|ref|YP_003276819.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
 gi|262207425|gb|ACY31523.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
          Length = 359

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 232/352 (65%), Gaps = 9/352 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  +S       +  Y  ++ E+A ++ I S+ + Y Q + 
Sbjct: 1   MQDFLRNQLERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D ++ ++AQ E+ + E E+ +LE+E+  LLLPKD DD +   +EIR
Sbjct: 61  DIAAAREML----DDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYAA   WKVEV+S+S+N+ GGYKE+V  I G  V+  ++
Sbjct: 117 AGTGGDESALFAGDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALR 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GR+HTSA TVAV+PE  E +       D+RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ +A++VL+AR+ + ER   A + +A RK 
Sbjct: 237 INKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAAMRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            IGSGDRS+RIRTYNF QGR+TDHRINLTLYKL  V++G + D+I  L  A 
Sbjct: 297 LIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAVMEGDLGDVIQALEHAR 348


>gi|300775397|ref|ZP_07085259.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
           35910]
 gi|300506137|gb|EFK37273.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
           35910]
          Length = 361

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 150/361 (41%), Positives = 226/361 (62%), Gaps = 6/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M      ++  +K R+ E+   + +   +    +   L +EY+ +  I+     Y     
Sbjct: 1   MSKSLIPKLEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVYDQYKGALD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   +I D  SD ++ DLA+ E L  + +I  LE E+  LL+PKD  DDK+ I+E+R
Sbjct: 61  SIAESEEIIAD-GSDRDLVDLAKEEKLEAQAKIPGLEEELKVLLIPKDPADDKNVIVELR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+FV D++RMY  Y   + W+ EV   S+    GYKE++  + G GV+  MK
Sbjct: 120 AGTGGDEAAIFVEDIYRMYTMYFKAKGWRHEVTD-SNEAAKGYKELIMKVEGEGVYGIMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQRVP TE+ GRVHTSA TVAVLPEA E+DV+I   DI + T R+ G+GGQ+V
Sbjct: 179 FESGVHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNV 238

Query: 238 NTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N  ++ V++TH P+G ++V    +SQ  NR  AM++LRA+LYD++ + +  + +A RK  
Sbjct: 239 NKVETKVQLTHKPSGLVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVQGDIAAQRKTM 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + +GDRS +I+TYN+ QGR+TDHRIN ++Y L+  + G I ++I+ ++ A  A+ +    
Sbjct: 299 VSTGDRSAKIKTYNYPQGRVTDHRINKSMYNLDAYMNGDISEMIDAVIMAENAEKMKGEE 358

Query: 357 E 357
           E
Sbjct: 359 E 359


>gi|110003948|emb|CAK98288.1| peptide chain release factor 1 protein [Spiroplasma citri]
          Length = 358

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 155/357 (43%), Positives = 231/357 (64%), Gaps = 5/357 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQ 57
           M   + +++  +  R+  I   +++   V+   KLT   +E A +   ++    Y     
Sbjct: 1   MNQKTIERLETMLKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKNVLN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   +I +   D E+ +LA+ E+   E    +L  E+  +LLPKD +DDK+ I EIR
Sbjct: 61  NINEAK-LILETEKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG E  +F GDL+RMY +YA  + WKVE++ +++++ GG+  I   + G  V+S+MK
Sbjct: 120 GAAGGDEGNIFAGDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESG HRVQR+P TE+ GRVHTS ATVAVLPE  E+D +I   D++IDT RASG+GGQHV
Sbjct: 180 FESGAHRVQRIPKTESKGRVHTSTATVAVLPEIEEVDFEIKTADLKIDTYRASGAGGQHV 239

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTG +V +   +SQH N+  AM+ LR++LY+ +++++  ER   RK  
Sbjct: 240 NTTDSAVRITHLPTGFVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERWTLRKDA 299

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +G+GDRSE+IRTYN+ Q R+TDHRINLTL KL+ +++G +D+I+  L+   Q   + 
Sbjct: 300 VGTGDRSEKIRTYNYPQNRVTDHRINLTLQKLDQIMEGNLDEIVVALINEEQRLKME 356


>gi|242309130|ref|ZP_04808285.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
 gi|239524171|gb|EEQ64037.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
          Length = 356

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 244/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     R+ EI   + +   ++      +L++E + +  ++ K   Y Q  Q  ++  +
Sbjct: 5   KLKPFIERYEEISALLIKPEILNDIKRITELSKEQSDLEKLVQKSKQYLQNLQSIEENKS 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+ DLA+ E+   E + +ELE+EI  LLLPKD +D+K+  LE+RAGTGG E
Sbjct: 65  LL----DDKELGDLAKEEIKEAEAQNQELESEIKVLLLPKDPNDEKNIYLELRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A +FVGDLF+ Y RYA  + WKVE++SS++N+ GGYKE++A I G+G +SR+K+E G HR
Sbjct: 121 AGIFVGDLFKAYVRYAESKGWKVEIISSNENNFGGYKEVIALIKGKGAYSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VNTTDSAV
Sbjct: 181 VQRVPETESQGRIHTSAITVAIMPEVDDVEVVINPNDLKIEVFRAGGHGGQCVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI V+   EKSQH+N+ +A+K+L+AR+Y+ E +    + +  RK Q+GSGDRS
Sbjct: 241 RITHIPTGISVSMQDEKSQHKNKDKALKILKARIYEAELEAQMEQNAEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R++DHRI LTLY LE ++  G +D +I P++   QA+ + ++ 
Sbjct: 301 ERIRTYNYPQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIAYFQAEALQNSG 354


>gi|15604741|ref|NP_219525.1| peptide chain release factor 1 [Chlamydia trachomatis D/UW-3/CX]
 gi|76788735|ref|YP_327821.1| peptide chain release factor 1 [Chlamydia trachomatis A/HAR-13]
 gi|237804372|ref|YP_002888526.1| peptide chain release factor 1 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255310824|ref|ZP_05353394.1| peptide chain release factor 1 [Chlamydia trachomatis 6276]
 gi|255317124|ref|ZP_05358370.1| peptide chain release factor 1 [Chlamydia trachomatis 6276s]
 gi|7388050|sp|O84026|RF1_CHLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361522|sp|Q3KMZ9|RF1_CHLTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3328413|gb|AAC67613.1| Peptide Chain Releasing Factor (RF-1) [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167265|gb|AAX50273.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           A/HAR-13]
 gi|231272672|emb|CAX09575.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|296435539|gb|ADH17713.1| peptide chain release factor 1 [Chlamydia trachomatis G/9768]
 gi|296436463|gb|ADH18633.1| peptide chain release factor 1 [Chlamydia trachomatis G/11222]
 gi|296437399|gb|ADH19560.1| peptide chain release factor 1 [Chlamydia trachomatis G/11074]
 gi|297139898|gb|ADH96656.1| peptide chain release factor 1 [Chlamydia trachomatis G/9301]
 gi|297748154|gb|ADI50700.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia
           trachomatis D-EC]
 gi|297749034|gb|ADI51712.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia
           trachomatis D-LC]
          Length = 359

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 173/348 (49%), Positives = 230/348 (66%), Gaps = 7/348 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
              ++ +   R  E+E ++S+        +   L++E+A +S I +        K+  QD
Sbjct: 1   MEIKVLECLKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D EI  + +  VL  E+ +  L  ++  LL+P D DDD S I+E+RAGTG
Sbjct: 61  -DKLALSTEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YAA + W+ EVLS+S++D GGYKE V  ISG  V   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D +  I  +D+RIDT R+SG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIP+G++V    E+SQH+N+ +AM+VL+AR+ D E ++ A E SA R  Q+G
Sbjct: 240 TDSAVRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           SGDRSERIRTYNF Q R+TDHRI LTLY L+ V++G +D I   L+T 
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRIGLTLYNLDRVMEGELDMITTALVTH 347


>gi|166154244|ref|YP_001654362.1| peptide chain release factor 1 [Chlamydia trachomatis 434/Bu]
 gi|166155119|ref|YP_001653374.1| peptide chain release factor 1 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335493|ref|ZP_07223737.1| peptide chain release factor 1 [Chlamydia trachomatis L2tet1]
 gi|238687434|sp|B0B9D0|RF1_CHLT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687452|sp|B0BB09|RF1_CHLTB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|165930232|emb|CAP03717.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           434/Bu]
 gi|165931107|emb|CAP06671.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 359

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 173/348 (49%), Positives = 230/348 (66%), Gaps = 7/348 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
              ++ +   R  E+E ++S+        +   L++E+A +S I +        K+  QD
Sbjct: 1   MEIKVLECLKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D EI  + +  VL  E+ +  L  ++  LL+P D DDD S I+E+RAGTG
Sbjct: 61  -DKLALSTEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YAA + W+ EVLS+S++D GGYKE V  ISG  V   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D +  I  +D+RIDT R+SG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIP+G++V    E+SQH+N+ +AM+VL+AR+ D E ++ A E SA R  Q+G
Sbjct: 240 TDSAVRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           SGDRSERIRTYNF Q R+TDHRI LTLY L+ V++G +D I   L+T 
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRIGLTLYNLDRVMEGELDMITTALVTH 347


>gi|297183483|gb|ADI19614.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0770_37D02]
          Length = 358

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 171/356 (48%), Positives = 248/356 (69%), Gaps = 3/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  +++  + N +  +E  ++        ++K ++EY++I  +I++   Y    +E+++
Sbjct: 1   MIPIEKVKSIVNTYKTLEKELASGNIDKKDFVKKSKEYSSIEEVINEARGYIDFGKEKKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +I + + D E+  LA+ E++ + K+  E E ++   LLPKD  D K+ ILEIRAGTG
Sbjct: 61  LEKIIDEKDGDKEMIKLAENELIQLSKKKSEYEQKLKIYLLPKDEADAKNAILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LFV DL++MYE+    +KW +E+++ S ++ GG+KE++  I G  ++S +KFESG
Sbjct: 121 GLEATLFVADLYKMYEKVCLKKKWLLEIINISKSEAGGFKEVILLIKGNNIYSFLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+D+ I  +D+RID  R+SG GGQ VNTTD
Sbjct: 181 VHRVQRVPKTETQGRVHTSAATVAVLPEAEEVDIKINEKDLRIDVFRSSGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+P+G++V+  + KSQH+NR +AMK+LR+R+Y+ ER++   ERS +RK QIGSG
Sbjct: 241 SAVRITHLPSGVVVSQQDEKSQHKNRAKAMKILRSRVYENEREKKDKERSRDRKNQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTL+KLE  L G   +++   L    Q   + + 
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEEFLNGVAFEELSQNLRMRDQETKLANL 356


>gi|228472858|ref|ZP_04057615.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275440|gb|EEK14217.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC
           33624]
          Length = 357

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 230/351 (65%), Gaps = 5/351 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  +K RF E+   + +   +     Y++LT+EY  +  ++ K   Y    +   +   
Sbjct: 4   RLDIVKQRFDEVSDLIIQPNIIADQKRYVQLTKEYKELKQLMDKRQEYITVTRNITEAEE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I + N D E+ ++A++++   ++ + +LE EI +LL+PKD +D K+ ++EIRAGTGG E
Sbjct: 64  IIKE-NIDPEMTEMARLQLEEAKERLPQLEEEIKFLLIPKDPEDSKNAVMEIRAGTGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A++F GDL+RMY +Y   + W V V+  ++   GG+KEI+  ++G  V+  +KFE+GVHR
Sbjct: 123 ASIFAGDLYRMYSKYCQDKGWSVSVMDMNEGTSGGFKEIILEVNGEDVYGTLKFEAGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTSAATV VLPEA E DV++ +ED++I    ++G GGQ VNTT SA+
Sbjct: 183 VQRVPQTETQGRVHTSAATVMVLPEAEEFDVELNMEDVKIIRTTSTGPGGQSVNTTYSAI 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           ++ HIPTGI V    EKSQH+N  +A+KVLR+RLY++E  +     SA RK  + SGDRS
Sbjct: 243 QLQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            +IRTYN+ QGR+TDHRI LTLY L  ++ G I  +I+ L  A   + +  
Sbjct: 303 AKIRTYNYPQGRVTDHRIGLTLYDLGNIMNGDIQRLIDELQLAENTEKLKE 353


>gi|46199879|ref|YP_005546.1| peptide chain release factor 1 [Thermus thermophilus HB27]
 gi|55981909|ref|YP_145206.1| peptide chain release factor 1 [Thermus thermophilus HB8]
 gi|2500140|sp|P96077|RF1_THET8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81567592|sp|Q72HB8|RF1_THET2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88192257|pdb|2B64|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Subunit, Trnas, Mrna And
           Release Factor Rf1 From A Crystal Structure Of The Whole
           Ribosomal Complex". The Entire Crystal Structure
           Contains One 70s Ribosome, Trnas, Mrna And Release
           Factor Rf1 And Is Described In Remark 400.
 gi|209156517|pdb|3D5A|X Chain X, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156573|pdb|3D5C|X Chain X, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|300508626|pdb|3MR8|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|300508681|pdb|3MS0|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (30s) And 3ms1 (50s).
 gi|1785848|dbj|BAA13349.1| peptide chain release factor 1 [Thermus thermophilus]
 gi|46197506|gb|AAS81919.1| peptide chain release factor 1 [Thermus thermophilus HB27]
 gi|55773322|dbj|BAD71763.1| peptide chain release factor 1 (RF-1) [Thermus thermophilus HB8]
          Length = 354

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 153/338 (45%), Positives = 213/338 (63%), Gaps = 8/338 (2%)

Query: 24  SESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQ 80
           S+   +     Y  L+  YA +  +I  I  Y +  ++ +   +++     D E++++A+
Sbjct: 20  SDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLL----DDPELKEMAK 75

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
            E  A+      LE E+   LLPKD  D++  I+EIRAGTGG EAALF  DLF MY R+A
Sbjct: 76  AEREALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFA 135

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++ EVL S   D GG+ ++V  + G G +   K+ESGVHRVQRVP TE  GR+HTS
Sbjct: 136 EEMGFETEVLDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTS 195

Query: 201 AATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            ATVAVLP+A E D  + +++IRID MRASG GGQ VNTTDSAVR+ H+PTGIMV     
Sbjct: 196 TATVAVLPKAEEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDS 255

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQ +NR +A+ +LR+RL +++R   A      R  QIG+G+RSE+IRTYNF Q R+TDH
Sbjct: 256 RSQIKNREKALMILRSRLLEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNFPQSRVTDH 315

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RI  T + LE VL G++  I+  L  A Q + + + +E
Sbjct: 316 RIGFTTHDLEGVLSGHLTPILEALKRADQERQLAALAE 353


>gi|21672454|ref|NP_660521.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009047|sp|Q8K9X0|RF1_BUCAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21623068|gb|AAM67732.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 361

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 165/355 (46%), Positives = 253/355 (71%), Gaps = 9/355 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+NR+ EIE+ +S+  ++   + +  L++EY  IS I+     +++ + + ++++ 
Sbjct: 8   KLKSLRNRYEEIEIMLSQKDTISNQEKFKNLSKEYLQISEIVKNFIKWEKLETDIKNINL 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +     +D E+ D+AQ E+  ++K+ ++LE +I  LLLP D +D  SC +EIRA TGG E
Sbjct: 68  LF----NDVEMHDIAQEELFIVKKQKKKLEEKIKILLLPVDPNDQHSCFIEIRAATGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +++F G+LFRMY RYA    WK E++SSS+N+ GG+KEI+A ++G+G   R+KFESG HR
Sbjct: 124 SSIFAGELFRMYTRYAENYMWKTEIMSSSENERGGFKEIIAKVTGKGACGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTS  TVA++P        +I + D++IDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSTCTVAIMPVRPKTKKEEIKVSDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITHIP+G +V    E+SQH+N+ +A+ +L AR+Y  +  +   E S+ R++ +G+G+R
Sbjct: 244 IRITHIPSGNVVECQDERSQHKNKAKALSILSARVYADKLAKSQKENSSMRRILLGTGER 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           S+R RTYNF+Q RITDHRINLT+YKL  VLQG +D +I+P++  +QA M+ S SE
Sbjct: 304 SDRNRTYNFAQNRITDHRINLTIYKLNEVLQGKLDLLIDPIMQEYQADMLSSLSE 358


>gi|269121056|ref|YP_003309233.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
 gi|268614934|gb|ACZ09302.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
          Length = 359

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 246/355 (69%), Gaps = 4/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           +++ D+  +  E+   + +        K+ E   A++ I   +  Y   K ++++L ++ 
Sbjct: 3   QKLDDVVKKHEELTQLLMDPVVTSDPKKIMEYNKALNSINDVVEKYKYYKDKKEELASLK 62

Query: 67  GD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            D  +  D+E++++   E+  +E+EI  +E E+  LLLP+D +D+K+ I+EIRAG GG E
Sbjct: 63  EDLKNEKDNEMKEMILEEIKNVEEEIPNIEEELKILLLPQDPNDEKNVIMEIRAGAGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  D+FRM+ RYA   KWKVEV+  +D   GG KEIV  I G+G +S++K+ESGVHR
Sbjct: 123 AALFAYDVFRMFSRYAERNKWKVEVIDRNDIGVGGLKEIVFLIKGKGAYSKLKYESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+SGR+HTS  TVAVLPE  +   V+I   D+++DT RASG+GGQHVNTTDSA
Sbjct: 183 VQRVPDTESSGRIHTSTITVAVLPEIDDVSQVEINPGDLKVDTYRASGAGGQHVNTTDSA 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V +  E+SQ +NR RAMKVL +++Y++E +       + R+LQ+GSGDR
Sbjct: 243 VRITHIPTGIVVTSQDERSQLKNRERAMKVLASKIYEMEVEEQRKTVESERRLQVGSGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF QGR+TDHRI LTL+KL+ VL G + ++I+ L    QA+++ +  E
Sbjct: 303 SEKIRTYNFPQGRVTDHRIKLTLHKLDQVLDGDLVELIDALTAYAQAELLKAVGE 357


>gi|57234023|ref|YP_181923.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195]
 gi|119361531|sp|Q3Z776|RF1_DEHE1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57224471|gb|AAW39528.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195]
          Length = 355

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 240/353 (67%), Gaps = 5/353 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ + + RF EIE  +S+   ++       L +E A +   +     Y    +E +D
Sbjct: 1   MLERLENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D +++D+ + E+ ++EK + +L  ++   LLPKD +DDKS I+EIRAGTG
Sbjct: 61  TKNLL-EIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  DL++MY RYA L+ WK EV+  + N  G  KE+V  ++G+G FSR+K+E G
Sbjct: 120 GDEAGLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEASGR+HTS ATVAVLP+  E+D+DI ++D+R+D   +SG+GGQ+V    
Sbjct: 180 VHRVQRVPQTEASGRIHTSTATVAVLPQVEEVDIDINMDDVRVDIFHSSGAGGQNVQKVA 239

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +A+R+THIPTG++V   + +SQ +N+ +A  VLRARL ++E+ ++  ER+ +R+ Q+G  
Sbjct: 240 TAIRLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQA 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSE+IRTYNF Q R+TDHRI LT + L ++L+GY+D+II+ L T  Q +++ 
Sbjct: 300 DRSEKIRTYNFPQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQTELLK 352


>gi|206895451|ref|YP_002247173.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738068|gb|ACI17146.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
           5265]
          Length = 360

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 230/353 (65%), Gaps = 5/353 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I  ++ R+  +   +             KL  E + + PII KI+ Y +  ++ +    +
Sbjct: 7   IRAMEERYESLVRDLENPEIASDPEQLMKLMREKSQLDPIIEKIADYRKLIRDIESAKAI 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   + E+++LA+ E+  +E  + + E E+  LL+  D  D+K  I+EIRAG GG EA
Sbjct: 67  L-EEPGEDELKELAEEELRNLEDILPQKEKELKLLLVEPDPMDEKPVIVEIRAGVGGEEA 125

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF GDLFRMY RYA  + WKVE++ S+  D GG+KE+V ++ G  V+SR+K+ESGVHRV
Sbjct: 126 ALFAGDLFRMYTRYAERKGWKVELVDSNPTDLGGFKEVVFSVEGDRVYSRLKYESGVHRV 185

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE+SGR+HTS ATVAVLPE  E++++I  ED+ IDT RA G GGQ+V   ++AVR
Sbjct: 186 QRVPETESSGRIHTSTATVAVLPEVDEVEIEINEEDLEIDTFRAGGHGGQNVQKNETAVR 245

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H PTGI+V    E+SQ QN+++A+KVLRA+LY+ + +      S+ R+  IGS +R E
Sbjct: 246 IKHKPTGIVVTCQDERSQLQNKMKALKVLRAKLYERQLEERQKSMSSFRRSLIGSAERGE 305

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +IRTYNF Q R+TDHRIN T+Y L+  L G +D++I+ L TA +   +    E
Sbjct: 306 KIRTYNFMQNRVTDHRINYTIYYLDRFLDGDLDEMIDALETADRETRLLEMDE 358


>gi|326335566|ref|ZP_08201753.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692332|gb|EGD34284.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 366

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 232/358 (64%), Gaps = 5/358 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           +++    ++  +K RF E+   + +   +     Y++LT+EY  +  ++ K   Y     
Sbjct: 6   IIWDMLARLDIVKQRFDEVSDLIIQPNIIADQKRYVQLTKEYKELKQLMDKREEYIVITG 65

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +   +I D  SD+E+ ++A +++   ++ + +LE EI +LL+PKD +D K+ ++EIR
Sbjct: 66  NIAEAEEIIKD-GSDAEMVEMAHLQLEEAKERLPQLEEEIKFLLIPKDPEDSKNAVMEIR 124

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA++F GDL+RMY +Y   + W V V+  ++   GG+KEI+  I+G  V+  +K
Sbjct: 125 AGTGGDEASIFAGDLYRMYSKYCQDKGWSVSVMDMNEGTSGGFKEIILEINGEDVYGTLK 184

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FE+GVHRVQRVP TE  GRVHTSAATV VLPEA E DV++ +ED++I    ++G GGQ V
Sbjct: 185 FEAGVHRVQRVPQTETQGRVHTSAATVIVLPEAEEFDVELNMEDVKIIRTTSTGPGGQSV 244

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTT SA+++ HIPTGI V    EKSQH+N  +A+KVLR+RLY++E  +     SA RK  
Sbjct: 245 NTTYSAIQLQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSM 304

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + SGDRS +IRTYN+ QGR+TDHRI LTLY L  ++ G I  +I+ L  A   + +  
Sbjct: 305 VSSGDRSAKIRTYNYPQGRVTDHRIGLTLYDLGNIINGDIQRLIDELQLAENTEKLKE 362


>gi|150025963|ref|YP_001296789.1| peptide chain release factor 1 [Flavobacterium psychrophilum
           JIP02/86]
 gi|166223557|sp|A6H0W3|RF1_FLAPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149772504|emb|CAL43987.1| Peptide chain release factor 1 (RF-1) [Flavobacterium psychrophilum
           JIP02/86]
          Length = 357

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 148/356 (41%), Positives = 228/356 (64%), Gaps = 5/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +K +F EI   + +   +    +   L +EY  +  ++ K   Y       ++
Sbjct: 1   MLDRLQIIKQKFDEISDLIIQPDVIADQKRYVALNQEYKGLKSLVEKRDEYVILMANIEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            + +I D  SD+++ ++A++++   ++ + ELE EI +LL+PKD +D K+ ++EIRAGTG
Sbjct: 61  ANEIIAD-GSDADMVEMAKMQLEEAKERLPELEEEIKFLLIPKDAEDAKNVMVEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA++F GDLFRMY +Y   R W+  V+  ++   GG+KE++  ++G  V+  +KFE+G
Sbjct: 120 GDEASIFAGDLFRMYTKYCENRGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATV VLPEA E DV I + D+R+D   +SG GGQ VNTT 
Sbjct: 180 VHRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQIDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTG++     +KSQH+N+ +A  VLR+RLY+ E  +   + +  R  Q+ SG
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKAFGVLRSRLYEQELAKKQADDAVKRTSQVSSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRS +IRTYN+SQGR+TDHRI L ++ ++ V+ G I   ++ L   +  + +  + 
Sbjct: 300 DRSAKIRTYNYSQGRVTDHRIGLDVFDMDGVMNGKIQKFVDELQLVNNMEKLKESE 355


>gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
 gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
          Length = 354

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 145/355 (40%), Positives = 217/355 (61%), Gaps = 17/355 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L     E+E ++++           KL + YA ++PI+      +Q + +      +
Sbjct: 5   LDALIAEHGELETKLADPSVHADQAGARKLGKRYAELTPIVRAARELEQTRNDLGAAREL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            G+  + +E  D     +  +E+ +         LLLP+D  D    ++EI++G GG E+
Sbjct: 65  AGEDPAFAEEADELSARIPQLEERLT-------ELLLPRDPHDSSDVVMEIKSGEGGEES 117

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMY RYA  + WK EVL  +D+D GG+K++   I  RG     V+SR+K+E 
Sbjct: 118 ALFAGDLLRMYLRYAERQGWKAEVLDGTDSDLGGFKDVTVAIKSRGDGPDGVWSRLKYEG 177

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+HTSAA V V+PE  +   ++I  +D+R+D  R+SG GGQ VNT
Sbjct: 178 GVHRVQRVPVTESQGRIHTSAAGVLVIPETEDVASIEIDDKDLRVDVFRSSGKGGQSVNT 237

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL+ARL  +  ++   E S  R+ Q+ 
Sbjct: 238 TDSAVRITHLPTGIVVSCQNERSQLQNKARAMQVLQARLQALAEEKAQQEASDARRTQVR 297

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + DRSER+RTYNF + RI+DHR+    + L+ VL G +D +++ L  A +A+ + 
Sbjct: 298 TVDRSERVRTYNFPESRISDHRVGYKAHNLDAVLDGELDAVLDALSAADRAERLA 352


>gi|167754864|ref|ZP_02426991.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402]
 gi|237735404|ref|ZP_04565885.1| peptide chain release factor 1 [Mollicutes bacterium D7]
 gi|167704914|gb|EDS19493.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402]
 gi|229381149|gb|EEO31240.1| peptide chain release factor 1 [Coprobacillus sp. D7]
          Length = 358

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 148/357 (41%), Positives = 227/357 (63%), Gaps = 6/357 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  ++NR+ E+   + +      +    ++T+E +++         Y + + 
Sbjct: 1   MNESMLDRLKTMENRYEELGHMLMDPDIGSDIKKMTEVTKEQSSLQAAYDLYQEYKEVEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              D   +  +  SD EI+++A++E+  +E  + E+ +++   L+PKD +D+K  I+EIR
Sbjct: 61  GISDAKELAKE--SDPEIKEMAKMELAELETRLPEIISKLEIELIPKDPNDNKDVIMEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG E  +F GDL+RMY +YA  + WKVEV+ + D + GGY  I   + G  V+ ++K
Sbjct: 119 GAAGGDEGNIFAGDLYRMYVKYAESQGWKVEVMEAVDAEAGGYSLISFMVKGEDVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESG HRVQRVP TE  GRVHTS ATV V+PE  E+DV+I   D+RIDT RASG+GGQH+
Sbjct: 179 FESGSHRVQRVPKTETQGRVHTSTATVLVMPEMEEVDVEINKSDLRIDTYRASGAGGQHI 238

Query: 238 NTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVRITH+PTGI+  +   +SQH N+ +AMK L +R+YD  +++   +  + RK +
Sbjct: 239 NKTDSAVRITHLPTGIVAASQDGRSQHDNKDKAMKALVSRIYDFYQQQHDEQVGSERKSK 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +GSGDR+E+IRTYN+ Q R+TDHRI LT+ +L+ ++ G +DDII  L+   Q   + 
Sbjct: 299 VGSGDRAEKIRTYNYPQNRVTDHRIGLTIQQLDRIVDGKLDDIITALINEDQRLKME 355


>gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
 gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis E264]
          Length = 459

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 184/344 (53%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R AE+  ++ +    +       L  E  ++  +++ ++  D   ++ QDL  + 
Sbjct: 122 DVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLEGVVTTLTELDNDLRDAQDLFDLA 181

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      +   +   +   ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 182 REEND-----EDTLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 236

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     +SG   +  ++ E+G+HR+ 
Sbjct: 237 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGDYAYGYLRTETGIHRLV 296

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 297 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 356

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RL++ E ++   E+    + K  +G G  
Sbjct: 357 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESSKTDVGWG-- 414

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +   + VL G +DD I+  L  
Sbjct: 415 -HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 457


>gi|254424165|ref|ZP_05037883.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
 gi|196191654|gb|EDX86618.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
          Length = 367

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 227/354 (64%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F E+  RM++       D + K+ +  A++   +     + +   E     
Sbjct: 8   QKLESVEETFGELTRRMADPDVAKDPDEFQKIAKMRASLEETVQTYHQWQETDGELAGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V  +  SDSE++++A +EV  +E+ +  LE  +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  EVYKEAASDSEMKEMAAMEVTELEESLAALEKRLKILLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA ++ GDL R+Y RYA  + WK  +LS S  D GG KE +  I G  V+S++KFESGVH
Sbjct: 128 EAGIWAGDLLRLYSRYAEGQGWKANLLSESRADMGGVKEAIVEIQGNQVYSKLKFESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTS ATVAV+PE  ++++ I  ++I + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPLTESGGRVHTSTATVAVMPEVDDVEIHIDPKEIVMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +   +E S+ RK Q+GSG R
Sbjct: 248 VDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMKLQEQKDEISSMRKSQVGSGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+N     L  VL+G I+ ++   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLNQNFS-LPAVLEGDIETVVQTCISQDQQERLEELA 360


>gi|119358446|ref|YP_913090.1| peptide chain release factor 1 [Chlorobium phaeobacteroides DSM
           266]
 gi|166223545|sp|A1BJT9|RF1_CHLPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119355795|gb|ABL66666.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 357

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 150/353 (42%), Positives = 220/353 (62%), Gaps = 6/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +K +  ++E ++ +       + + KL +EY  +  I+     Y   K++ ++  
Sbjct: 3   DKLQAIKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDLCSIVEAYDRYALAKKQLEESR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +         +        E  +   E ++  LLLPKD  D ++ I+EIRAGTGG 
Sbjct: 63  LLLKNEKEQDMRAMVQDEISSLQESILER-EKQLKLLLLPKDEVDSRNVIIEIRAGTGGE 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGRGVFSRMKFESGV 182
           EAALF  DL RMY+R+A  + WK EVL  +++   GG++EIV  +SG  V+  MK+ESGV
Sbjct: 122 EAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMKYESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE  GR+HTSAA+VAVLPEA E+DV+I  +D+R DT R+ G GGQ+VN  ++
Sbjct: 182 HRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRKDDLRFDTYRSGGKGGQNVNKVET 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH P+GI+V    E+SQ QN+ RAMK+LRA+LYD +      +R+  R+  + +GD
Sbjct: 242 AVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGLRRSMVTTGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RS +IRTYN+ Q R+TDHRI  T + L  ++QG I DII  L    QA+ + +
Sbjct: 302 RSAKIRTYNYPQSRVTDHRIGFTSHALPQIMQGDIKDIIEALKMHDQAERLQA 354


>gi|157736354|ref|YP_001489037.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
 gi|315635491|ref|ZP_07890757.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
 gi|166977359|sp|A8EQZ4|RF1_ARCB4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157698208|gb|ABV66368.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
 gi|315480249|gb|EFU70916.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
          Length = 355

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 180/356 (50%), Positives = 253/356 (71%), Gaps = 9/356 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    NRF EI   +  S     +     L++E ++I PI+SK   Y +  ++ +
Sbjct: 1   MLKDKLQPFINRFEEINQLLMSSEITSDIKRMTDLSKEQSSIQPIVSKAKEYIKVLEDIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++     D E+ DLA+ E+  +E    ELE EI  L++PKD +DD++  LE+RAGT
Sbjct: 61  ENKLML----DDPELGDLAKEELKELETRKPELEEEIKVLMIPKDPNDDRNIYLELRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+FVGDLFR Y RYA    WKVE++SSSD++ GGYKEIV  + G  V+S++KFE 
Sbjct: 117 GGDEAAIFVGDLFRAYLRYAENNGWKVEIMSSSDSESGGYKEIVILVKGDHVYSKLKFEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVPATE+ GRVHTSA TVAV+PE  +++++I   D++ID MRASG+GGQ VNTT
Sbjct: 177 GTHRVQRVPATESQGRVHTSAITVAVMPEVDDVEIEINENDLKIDVMRASGNGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+GI+VT   +KSQH+N+ RA+KVL+A+LY++E ++      A RK Q+G+
Sbjct: 237 DSAVRITHIPSGIVVTNQDQKSQHKNKDRALKVLKAKLYEIEMEKKMEAEGATRKEQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGS 354
           GDRS RIRTYN+ Q RI+DHRINLTLY+L+Y++  G   ++I+PL+  HQ+K+I +
Sbjct: 297 GDRSGRIRTYNYPQNRISDHRINLTLYRLDYIMNDGLFGEVIDPLIADHQSKLIEA 352


>gi|297568589|ref|YP_003689933.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2]
 gi|296924504|gb|ADH85314.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2]
          Length = 357

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 246/352 (69%), Gaps = 5/352 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+ D+K+R   +E R+S+   +    +   L +E+A +S +    + Y + + +     
Sbjct: 3   EQLADIKDRKKNLEDRLSDPDLMQDPARFKGLAKEHAQVSKLDDLYARYLKAQHDFAANR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I +     E+  LA+ E   + + I  LE E+   LLPKD +D+K+ +LEIRAGTGG 
Sbjct: 63  QLIEEEED-EEMLALARAENGELRESIAVLEKELRLALLPKDPNDEKNVLLEIRAGTGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALFV DLFRMY RYA    WKVE LSS+    GGYKEI+A ISG  V+SR+K+ESGVH
Sbjct: 122 EAALFVADLFRMYSRYAEQLGWKVETLSSNPIGIGGYKEIIALISGEHVYSRLKYESGVH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GRVHTSA TVAVLPEA E+++ I   +++ D  R+SG GGQ VNTTDSA
Sbjct: 182 RVQRVPATETQGRVHTSAVTVAVLPEAEEVELKINPSELKFDVFRSSGPGGQSVNTTDSA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTG++V    EKSQH+N+ +A++VLRARL D  ++   ++ S++RK Q+GSGDR
Sbjct: 242 VRVTHLPTGLVVSCQDEKSQHKNKAKALQVLRARLLDKLQQEQHDQISSDRKSQVGSGDR 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           SER+RTYNF Q R+T+HRINLT+Y+L+ V+ G++D+++ PL+   Q + + S
Sbjct: 302 SERVRTYNFPQNRLTEHRINLTIYRLDDVMMGHLDEVVEPLMLHFQTEALKS 353


>gi|330444669|ref|YP_004377655.1| peptide chain release factor 1 [Chlamydophila pecorum E58]
 gi|328807779|gb|AEB41952.1| peptide chain release factor 1 [Chlamydophila pecorum E58]
          Length = 363

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 166/357 (46%), Positives = 233/357 (65%), Gaps = 6/357 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEE 59
                ++ +  +R  EIE+R+S     D    Y  L++E+A +S +    +   ++++  
Sbjct: 1   MFDDTKLTEYLSRLEEIEVRLSSPEIFDHPEEYKALSKEHARLSELKEAYAQLQEQEKIL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            D    +     D E+  + +  ++  + E   L   +  LL+P D DDD + I+E+RAG
Sbjct: 61  ADDKQALSMEK-DPEMIAMLEEGLVEGKAETERLRKVLENLLVPPDPDDDLNVIMELRAG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALFVGD  RMY  Y+A + WK EVLSSS++D  GYKE V  ISG GV   +++E
Sbjct: 120 TGGEEAALFVGDCVRMYHLYSAAKGWKYEVLSSSESDLKGYKEYVMGISGTGVKRFLQYE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           +G HRVQRVP TE  GRVHTSA TVA+LPE   + ++ I  +D+RIDT RASG+GGQHVN
Sbjct: 180 AGTHRVQRVPETETQGRVHTSAITVAILPEPAEDDEIIIDEKDLRIDTFRASGAGGQHVN 239

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRITH+PTG++V    E+SQH+N+ +AM++L+AR+ D E ++   E SA R  Q+
Sbjct: 240 VTDSAVRITHLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRQKEASAMRSAQV 299

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GSGDRSERIRTYNFSQ R+TDHRI LTLY L+ V++G +D I   L++    +++  
Sbjct: 300 GSGDRSERIRTYNFSQNRVTDHRIGLTLYSLDKVMEGDLDPITTALVSHAYHQLLSE 356


>gi|134102728|ref|YP_001108389.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291007815|ref|ZP_06565788.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915351|emb|CAM05464.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 357

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 148/360 (41%), Positives = 221/360 (61%), Gaps = 18/360 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L   +AE+E R+++           KL   YA ++P++      DQ + +      
Sbjct: 5   KLDGLLAEYAELERRLADPEVHADQAGARKLGRRYAELTPVVRCSKELDQARSDLATARE 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +  + +E  +          + +  LE ++  LLLP+D  D    +LE+++G GG E
Sbjct: 65  LADEDPAFAEEAESL-------AESVPALEAKLTELLLPRDPHDASDVLLEVKSGEGGEE 117

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVFSRMK 177
           +ALF GDL RMY R+A  + W+ E+L ++++D GGYK+    +          GV+S++K
Sbjct: 118 SALFAGDLLRMYLRFAERQGWRTEILDATESDLGGYKDATVAVKTKAGDTGPDGVWSKLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FE GVHRVQRVP TE+ GRVHTSAA V V PE  E++V++  +D+RID  R+SG GGQ V
Sbjct: 178 FEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEVEVDEKDLRIDVYRSSGPGGQSV 237

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+V   +EKSQ QN++RA++VLRARL  +  +    E S  R+ Q
Sbjct: 238 NTTDSAVRITHLPTGIVVSCQNEKSQLQNKIRAIQVLRARLQALAEEEAEREASETRRSQ 297

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSERIRTYNF + RI+DHR+N   Y L+ VL G +D ++  L+ A + + + +A 
Sbjct: 298 VRTVDRSERIRTYNFPENRISDHRVNYKAYNLDQVLDGDLDGVLGALVAADRQERLATAE 357


>gi|171911189|ref|ZP_02926659.1| peptide chain release factor 1 [Verrucomicrobium spinosum DSM 4136]
          Length = 358

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 231/352 (65%), Gaps = 6/352 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I   K+RF+E+E  M      D   K      E+ ++  ++   S Y + +Q+  D   +
Sbjct: 7   IEKKKDRFSELEEMMGHPNFYDDNRKAGDLLREHRSLEALVKAWSEYQRTEQQIADNQEL 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
               + D+E+  LA+ E+  ++  + ELE E+   +LP D  + +  I+EIRAGTGG EA
Sbjct: 67  AK--SGDAELAALAEEELPTLQARLLELEGEVQRHILPPDPLEGRDVIMEIRAGTGGDEA 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A+F GDL+RMY RYA  R WK+E + +S +D GGYKE+V  +SG  VF  +K+ESGVHRV
Sbjct: 125 AIFAGDLYRMYNRYAEERGWKIESMEASPSDAGGYKEVVFKVSGEDVFRTLKYESGVHRV 184

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVPATEA GR+HTSAATVAVLPEA E+D+ +  +++RI+  RASG GGQ VNTTDSAV+
Sbjct: 185 QRVPATEAQGRIHTSAATVAVLPEAEEVDLQLKPDELRIEVCRASGHGGQGVNTTDSAVQ 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + H+PTG++V     +SQ +N+ +A+ ++R+RL + +++  A + SA+RK  IG G R E
Sbjct: 245 VMHLPTGMIVRCQDGRSQLKNKEKAITIMRSRLLEKKQQEEAAKYSAHRKALIGGGGREE 304

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +IRTYN+ Q RITDHRI++TLY L+  + G I D+++ L  +     +  A 
Sbjct: 305 KIRTYNYPQNRITDHRIDVTLYNLDMFVDGRIGDLVDKLQASEIHDRLAEAG 356


>gi|89898158|ref|YP_515268.1| peptide chain release factor 1 [Chlamydophila felis Fe/C-56]
 gi|119361521|sp|Q255B5|RF1_CHLFF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89331530|dbj|BAE81123.1| peptide chain release factor RF-1 [Chlamydophila felis Fe/C-56]
          Length = 361

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 167/359 (46%), Positives = 238/359 (66%), Gaps = 7/359 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             K+I +   R  E+E+++S+    +   +   L+ E+A ++ + +      + ++   D
Sbjct: 1   MEKKILEYLKRLEEVEVKISDPEIFNNPKEYSSLSREHARLTELKNVYDKVLRHEKILND 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               +     D E+  + +  + + + EI +L   +  LL+P D DDD + I+E+RAGTG
Sbjct: 61  DKHALAQEK-DPEMIAMLEEGIQSGKSEIEKLYKILENLLVPPDPDDDLNVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YA+ + WK E LS+S++D GGYKE V  ISG GV   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYASAKGWKYEELSASESDIGGYKEYVMGISGTGVKRLLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI--PLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D ++    +D++IDT RASG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAITVAVLPEPAEDDEEVFVDEKDLKIDTFRASGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQH+N+ +AM++L+AR+ D E +R   E SA R  Q+G
Sbjct: 240 TDSAVRITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNFSQ R+TDHRI LTLY L+ V++G +D I + L++    ++  + +E
Sbjct: 300 SGDRSERIRTYNFSQNRVTDHRIGLTLYNLDKVMEGDLDTITSALVSHAYHQLFQNGNE 358


>gi|50365449|ref|YP_053874.1| peptide chain release factor 1 [Mesoplasma florum L1]
 gi|61214613|sp|Q6F0I3|RF1_MESFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50364005|gb|AAT75990.1| peptide chain release factor 1 [Mesoplasma florum L1]
          Length = 363

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 228/353 (64%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  ++ R  +I+  +     V    K   L +E A +  ++ K   Y    Q   D  
Sbjct: 7   EALETMQKRVDQIDKDLQSEEIVSDVKKMLELNKERANLIEVVEKFIEYKTIIQSIADAK 66

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G +  D+E+ +LA++E+   E  +  +   I  LLLPKD +DDK+ I+EIR   GG 
Sbjct: 67  EILG-NEKDAEMIELAKMELSENEDAVEPIVAIIEELLLPKDPNDDKNVIVEIRGAAGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDL RMY+ YA  + WK+ +L ++ ++ GG+ ++   + G  V+S++KFESG H
Sbjct: 126 EANIFAGDLLRMYKLYAETQNWKITMLDANSSEAGGFSQVSFMVKGDRVYSKLKFESGAH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GR+ TS ATVAVLPE ++++++I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 186 RVQRVPKTEAKGRIQTSTATVAVLPEMSDVEIEIKNSDLRIDTYRSSGAGGQHVNTTDSA 245

Query: 244 VRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG++  +   +SQH N+  AM +LRAR+Y+ E ++   E  A RK  +G+G R
Sbjct: 246 VRITHIPTGVVAASQDGRSQHDNKDIAMTMLRARIYEAELEKQQAEADATRKNAVGTGAR 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SE+IRTYN+ Q R+TDHR+ LTL KL+ V++G IDD I  L+   Q + + + 
Sbjct: 306 SEKIRTYNYPQNRVTDHRVGLTLNKLDQVMEGKIDDFIIALVNDEQRQKVEAQ 358


>gi|296170240|ref|ZP_06851833.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895116|gb|EFG74834.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 357

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 149/361 (41%), Positives = 210/361 (58%), Gaps = 17/361 (4%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + I  L    AE+E R+++     +     K    +A ++PI++     +  + + + 
Sbjct: 4   PVQTIDVLLAEHAELEQRLADPDLHSNPAEARKAGRRFARLAPIVATYRKLESARGDLET 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  D  S ++               + EL+ ++  +L P+D  D    +LE+++G G
Sbjct: 64  ARELAADDESFADEVTEL-------AARVAELDTQLTDMLAPRDPHDADDIVLEVKSGEG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRM 176
           G E+ALF  DL RMY RYA    W V VL  + +D GGYK+   +I+       GV+SRM
Sbjct: 117 GEESALFAADLARMYIRYAERHGWNVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GRVHTSAA V V PE  E+ +V I   D+RID  R+SG GGQ
Sbjct: 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVHIDESDLRIDVYRSSGKGGQ 236

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTGI+V   +E+SQ QN+ RA++VL ARL  +  ++   + SA+R 
Sbjct: 237 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARALQVLAARLQAMAEEQALADASADRA 296

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            QI + DRSERIRTYNF + RITDHRI    + L+ VL G +D + + L  A +   +  
Sbjct: 297 SQIRTVDRSERIRTYNFPENRITDHRIGYKAHNLDQVLDGDLDAMFDALGAADKQARLQQ 356

Query: 355 A 355
           A
Sbjct: 357 A 357


>gi|296268873|ref|YP_003651505.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
 gi|296091660|gb|ADG87612.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
          Length = 350

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 151/351 (43%), Positives = 218/351 (62%), Gaps = 12/351 (3%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + +L   +A++E ++++           K  + YA ++PII+        +++ +    +
Sbjct: 3   LDELVKEYADLEQKLADPAVHADQAKARKYGKRYAELTPIITTYRELQSVREDLEAAREL 62

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                           E   +E +I ELE+ +  LL+PKD +D K  I+EI+AG GG E+
Sbjct: 63  AR-------EDPAFAEEAAELEAKIPELEDRLKRLLIPKDPNDGKDIIMEIKAGEGGEES 115

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-VFSRMKFESGVHR 184
           ALF  DL RMY RYA    +K E++S+  ++ GGYK++  +I G+   +SR+K+E GVHR
Sbjct: 116 ALFAADLLRMYLRYAERLGYKAEIISAQPSELGGYKDVTISIKGKEGAWSRLKYEGGVHR 175

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GR+HTSAA V V PEA EIDV I   D+RID  R+SG GGQ VNTTDSAV
Sbjct: 176 VQRVPVTESQGRIHTSAAGVLVYPEAEEIDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAV 235

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTG++V   +EKSQ QN+  AM++LRARL  + ++      +A R+ Q+ + DRS
Sbjct: 236 RITHIPTGVVVSCQNEKSQLQNKEAAMRILRARLLALAQQEAEAAAAAERRSQVRTVDRS 295

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ERIRTYNF + RI+DHR+    Y L+ VL G +D +I  L+ A  A+ + +
Sbjct: 296 ERIRTYNFPENRISDHRVGYKAYNLDQVLDGDLDGVIQALIDAELAEKLAA 346


>gi|15616790|ref|NP_240002.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681545|ref|YP_002467930.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682101|ref|YP_002468485.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471228|ref|ZP_05635227.1| peptide chain release factor 1 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11134308|sp|P57268|RF1_BUCAI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790868|sp|B8D8X1|RF1_BUCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790869|sp|B8D775|RF1_BUCAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25299668|pir||H84949 peptide chain release factor 1 [imported] - Buchnera sp.  (strain
           APS)
 gi|10038853|dbj|BAB12888.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621834|gb|ACL29990.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624388|gb|ACL30543.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311085914|gb|ADP65996.1| peptide chain release factor 1 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311087068|gb|ADP67148.1| peptide chain release factor 1 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 361

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 165/361 (45%), Positives = 252/361 (69%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+NR+ EIE+ +++   +   +    L++EY  +S II     +++ + 
Sbjct: 1   MNNSILNKLKSLRNRYQEIEIMLTQKNVISNRENLKTLSKEYLKLSEIIKYFIEWEKLEV 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++++ ++    +D EI+ +A+ E+    K+ + LE +IN LLLP+D +D  SC +EIR
Sbjct: 61  DIENVNILL----NDVEIQGMAEEELYFFNKKKKALEKKINQLLLPEDPNDKHSCFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           + TGG E+++F G+LFRMY RYA    WKVE++++S+++ GG+KEI+A I+GRG   R+K
Sbjct: 117 SATGGDESSIFAGELFRMYLRYAESYSWKVEIMNTSESEKGGFKEIIAKITGRGACGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTS  TVAV+P        +I   D++IDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSTCTVAVMPVTPKTEKEEINSSDLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTG +V    E+SQH+N+ +A+ +L AR+Y  + ++   E S+ RK+
Sbjct: 237 VNTTDSAIRITHIPTGNVVECQDERSQHKNKAKALSILSARVYAAKLEKDRQESSSMRKI 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+G+RS+R RTYNF Q RITDHRINL++YKL+ VLQG +D +I+P++  +QA M+ S 
Sbjct: 297 LLGTGERSDRNRTYNFPQNRITDHRINLSIYKLDEVLQGKLDLLIDPIIQEYQADMLSSL 356

Query: 356 S 356
           S
Sbjct: 357 S 357


>gi|309812101|ref|ZP_07705859.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185]
 gi|308433788|gb|EFP57662.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185]
          Length = 362

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 145/359 (40%), Positives = 215/359 (59%), Gaps = 20/359 (5%)

Query: 12  LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +   + ++E +++E  +        +L + YAA++P ++    + + + +      +  +
Sbjct: 8   IVAEYDDLEKQLAEPATHADPTLMRRLNKRYAALAPTVAAYHAWKRAQDDLGAAEELADE 67

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             + +      Q  + A   ++R L       LLP+D DD++  +LE++AG GG+E+ALF
Sbjct: 68  DAAFAAELPALQTHLDASADKLRTL-------LLPRDEDDERDVVLEVKAGEGGAESALF 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESG 181
            GDL RMY RYA  R WK E+  ++D D GGYK+   T+        G   ++R+K+E G
Sbjct: 121 AGDLVRMYLRYAERRGWKAEIADATDADLGGYKDARITVRAKGLPEPGEAPWARLKYEGG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
           VHRVQRVP TE+ GR+HTSAA V V+P+  E D +      D++ID  R+SG GGQ VNT
Sbjct: 181 VHRVQRVPVTESQGRIHTSAAGVLVMPDLDEDDDEIEFGPNDLKIDVYRSSGPGGQSVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V   +EKSQ QN+  A++VL+ARL  +E +R   E SA RK Q+ 
Sbjct: 241 TDSAVRITHLPTGVVVSCQNEKSQLQNKESALRVLKARLRQMEIERKEAEASAARKSQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           + DRSERIRTYNF + RI DHR     Y L+ VL G +D ++   L A +A  + +  E
Sbjct: 301 TVDRSERIRTYNFPENRIADHRTGYKSYNLDAVLDGDLDAVVQSALDADEAARLAAVGE 359


>gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
 gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
          Length = 354

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 159/347 (45%), Positives = 232/347 (66%), Gaps = 6/347 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
              ++ ++ NR  E+E  + +   V+   +   LT+E+A +S +          ++E  D
Sbjct: 1   MKNKVEEMLNRLPELEELLGQPDVVNDQKRYRLLTQEHAHLSQLKQVYEDLISSRKELSD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D+E   + + ++  + K+  EL+ ++  L++P D  D+K+ ILE+RAGTG
Sbjct: 61  NEEMFASEE-DAEFIKVLEEDIERLTKKTGELQKKLETLIVPPDPKDNKNTILELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY+ +A  R WK E L+SS +D GG+KE +  +SG  V+  +K+E G
Sbjct: 120 GDEAALFVGDCVRMYKMFADERGWKYEELASSPSDAGGFKEYMMALSGPNVYRYLKYEGG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HRVQRVP TE  GRVHTSA TVAVL     + +V I  +D+R+DT RASG+GGQHVNTT
Sbjct: 180 THRVQRVPETETQGRVHTSAITVAVLLEPDEDSEVQIDEKDLRVDTYRASGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+THIPTGI+   S E+SQH+NR +AM++L+A++ ++E ++   ER++ R  Q+GS
Sbjct: 240 DSAVRLTHIPTGIVAYCSEERSQHKNRDKAMRLLKAKIMEIEAQKKFEERASERASQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           GDRSERIRTYNF Q RITDHRINLT Y L+ V++G +++I+N ++  
Sbjct: 300 GDRSERIRTYNFPQNRITDHRINLTKYNLDKVMEGDLEEIVNAIVAH 346


>gi|328954736|ref|YP_004372069.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium
           glomerans PW2]
 gi|328455060|gb|AEB06254.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium
           glomerans PW2]
          Length = 355

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 153/356 (42%), Positives = 226/356 (63%), Gaps = 7/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L   + ++E ++S+         Y +L +E+A  + +++    Y     + + 
Sbjct: 1   MLDKLKKLIKAYEDLEKKLSDPAVMGDQKEYTRLAKEHANQADLVAMARAYVTAYDDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D++ + +   ++   E +I  LENEI  +L+P D +D+K+ I+EIR+  G
Sbjct: 61  AKEMLHEE-TDAQSKAMLLADISENEAKIPGLENEIKVMLIPGDPNDEKNTIMEIRSAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDLF+MYER+    +WK+E+LS+S ++ GG+K I   +SG  V+S MK+ESG
Sbjct: 120 GDEAAIFAGDLFKMYERFFEAHRWKMELLSASPSEAGGFKSIEFKVSGDKVYSLMKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE+ GR+ TS ATVAVLPEA EID+ I   D+RIDT  ASG GGQ VNTT 
Sbjct: 180 VHRVQRIPKTESQGRIQTSTATVAVLPEADEIDIKIDQGDLRIDTYCASGPGGQCVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY+ E ++   E  A R+ QIG G
Sbjct: 240 SAVRITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYERELEQQQAELGAERQSQIGRG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           +RSE+IRTYN  Q R+TDHRI  +      VL G  +  +IN L  A +A+ +  A
Sbjct: 300 NRSEKIRTYNQPQDRVTDHRIGFSSTY-NGVLLGDQLATVINALSAADRAEKLAQA 354


>gi|160902302|ref|YP_001567883.1| peptide chain release factor 1 [Petrotoga mobilis SJ95]
 gi|160359946|gb|ABX31560.1| peptide chain release factor 1 [Petrotoga mobilis SJ95]
          Length = 356

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 152/349 (43%), Positives = 229/349 (65%), Gaps = 7/349 (2%)

Query: 11  DLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           ++K +  E+E ++S+      ++   KL +E++ +S + +    Y+Q  ++ + L  +  
Sbjct: 9   EVKKKIKELEKQLSDPYITNDIENLKKLGQEHSKLSELNTLFESYEQDLEDIKALREMY- 67

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             N D    +   +     +KE    +  I  L+   + D+ ++ I+EIRAGTGG EA+L
Sbjct: 68  -ENKDVSEEEYQSMLQELEKKEEETRKKIIEGLVSQDEYDE-RNIIMEIRAGTGGDEASL 125

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F  +L RMY RYA  + WK E+L  ++N+ GG K  +  I G+G + R+K+ESGVHRVQR
Sbjct: 126 FASELMRMYLRYAERKNWKYELLDLNENELGGIKTAILKIKGQGAYRRLKYESGVHRVQR 185

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           VP TE+SGR+HTS ATVAVLPEA +IDV I   D+RIDT RASG+GGQ+VN TDSAVRIT
Sbjct: 186 VPQTESSGRIHTSTATVAVLPEATDIDVQINENDLRIDTYRASGAGGQYVNKTDSAVRIT 245

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +E+SQHQN+ +A+ +LRA+L++++ +   ++ +  RK QIG+  RSE+I
Sbjct: 246 HLPTGIVVTCQNERSQHQNKEKALNILRAKLFEIKLEEQQSQLTQERKSQIGTAQRSEKI 305

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           RTYNF Q R+TDHRI  T +++  +L G +D+II+ LL     + + S 
Sbjct: 306 RTYNFPQNRVTDHRIQYTTHRINEILDGDLDEIIDKLLEKDLKEKLESL 354


>gi|294055591|ref|YP_003549249.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614924|gb|ADE55079.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
           45221]
          Length = 362

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 152/359 (42%), Positives = 229/359 (63%), Gaps = 7/359 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQ 57
           M  +    I   +++ A+++ +M++        +    + E+  +S +I +   +   + 
Sbjct: 1   MAKIPD--IAPFRDKLADLDAQMADPNFYSDQRRAAEVSREHQRVSGLIERFEAFHSAQT 58

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++ D + + E+R++A  EV  ++ +I  LE ++   ++P D  D ++ ++EIR
Sbjct: 59  QIVENEAMMADSSVEEELREMAAEEVEELKGQIETLEKDVLRAMVPPDATDSRNSVMEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
            G GG EA +F GDL+RMY RYA  + W+VEV+S+S  + GGY+EI+  ISG   +  +K
Sbjct: 119 GGAGGDEANIFAGDLYRMYTRYAEAKGWRVEVMSTSPAETGGYREIIFNISGEDAYKHLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQRVP TE  GR+HTS ATVAVLPEA E+D++I  +D+ I TMRASG+GGQHV
Sbjct: 179 FESGVHRVQRVPVTETQGRIHTSTATVAVLPEAEEVDIEINPQDLEISTMRASGAGGQHV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAV + H PTG+ V  + E+SQ +NR +A+ V+R+RL   +      + +A RK Q
Sbjct: 239 NTTDSAVMMVHKPTGVTVYCADERSQIKNRAKALTVMRSRLLQAKVDEENAKYAAERKGQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           IG+GDRSERIRTYN+ QGR+TDHRI + L  L  V+ G +DD+I+ L        I + 
Sbjct: 299 IGTGDRSERIRTYNYPQGRLTDHRIGMNLS-LPSVIDGALDDLIDALHNVDYEARIENL 356


>gi|284992528|ref|YP_003411082.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM
           43160]
 gi|284065773|gb|ADB76711.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM
           43160]
          Length = 363

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 155/357 (43%), Positives = 215/357 (60%), Gaps = 14/357 (3%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  L    A +E  +++           +L   YA ++P++      D  + +     
Sbjct: 14  DRLSGLLAEHAALETELADPAVHADASRARRLGRRYAQLAPLVETKRALDAVRDDLAAAR 73

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +  S +             E+ + ELE  +  LL+P+D DDDK  ILEI+AG GG+
Sbjct: 74  ELADEDASFAAEAAAL-------EQRVPELEERLRSLLVPEDPDDDKDVILEIKAGEGGA 126

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG---VFSRMKFES 180
           E+ALF GDL RMY RYA  R W  EVL +   D GGYK++   +  R    ++SR+KFE 
Sbjct: 127 ESALFAGDLLRMYLRYAERRGWATEVLDAVPADLGGYKDVAIAVKSRSDEGIWSRLKFEG 186

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSA  V VLPEA E+DV +   D+RID  R+SG GGQ VNTT
Sbjct: 187 GVHRVQRVPVTESQGRIHTSAVGVLVLPEAEEVDVTVDPNDLRIDVFRSSGPGGQSVNTT 246

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V+  +EKSQ QNR  A++VLR+RL    R   A   S  R+ Q+ +
Sbjct: 247 DSAVRITHLPTGIVVSSQNEKSQLQNRESALRVLRSRLLAAARDEAAAAASDQRRSQVRT 306

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            DRSER+RTYNF + RI+DHR+    + L+ VL G +D +I+ L  AH A+++ + S
Sbjct: 307 VDRSERVRTYNFPESRISDHRVGFKAHNLDQVLDGELDPVIDALTRAHTAELLAAGS 363


>gi|270308380|ref|YP_003330438.1| peptide chain release factor 1 [Dehalococcoides sp. VS]
 gi|270154272|gb|ACZ62110.1| peptide chain release factor 1 [Dehalococcoides sp. VS]
          Length = 355

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 239/353 (67%), Gaps = 5/353 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ + + RF EIE  +S+   ++       L +E A +   +     Y    +E ++
Sbjct: 1   MLERLENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAMSKELEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D ++RD+ + E+  +EK +  L  ++   LLPKD +DDKS I+EIRAGTG
Sbjct: 61  AKNLL-EIEKDEDMRDMVRGEIENLEKSMANLYEQMTLELLPKDPNDDKSIIMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  DL++MY RYA L+ WK EV+  + N  G  KE+V  ++G+G FSR+K+E G
Sbjct: 120 GDEAGLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEASGR+HTS ATVAVLP+A E+D+DI ++D+R+D   +SG+GGQ+V    
Sbjct: 180 VHRVQRVPQTEASGRIHTSTATVAVLPQAEEVDIDINMDDVRVDIFHSSGAGGQNVQKVA 239

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +A+R+THIPTG++V   + +SQ +N+ +A  VLRARL ++E+ ++  ER+ +R+ Q+G  
Sbjct: 240 TAIRLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQA 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSE+IRTYNF Q R+TDHRI LT + L ++L+GY+D+II+ L T  Q +++ 
Sbjct: 300 DRSEKIRTYNFPQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQTELLK 352


>gi|308810022|ref|XP_003082320.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116060788|emb|CAL57266.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1699

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 138/354 (38%), Positives = 220/354 (62%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++       AE+  RM++         + +L++    ++ ++   + Y     E ++  
Sbjct: 57  KKLEATAKTHAELNERMADPEVTSDPKEFQRLSKACGELNYVVDLYARYRACVDEIEEAR 116

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+  +A+ E+ A+ +E  +L  ++   LLPKD  D+K+ +LEIRAGTGG 
Sbjct: 117 AMVKDAAGDEEMVAMAREEIDALTEESDKLVEDMTLALLPKDPLDEKNIMLEIRAGTGGD 176

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA ++ GDL+RMY R+A    W+  V++S+  D GG+KEIVA I G  V+S +K+E+GVH
Sbjct: 177 EAGIWAGDLYRMYMRFAEREGWQATVVTSNTADAGGFKEIVAEIKGADVYSNLKWEAGVH 236

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE  GR+ TS ATVA++PE  E++V I  +D+ I T R+ G+GGQ+VN  ++A
Sbjct: 237 RVQRVPATETQGRIQTSTATVAIMPEVDEVEVQIDEKDLDISTARSGGAGGQNVNKVETA 296

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           + + H PTGI +  + E++Q +NR+RAM++LRA+L++++ +      S  RK Q+GSG R
Sbjct: 297 IDLMHKPTGIRVFCTEERTQLKNRIRAMQILRAKLFEIQLEEQQKAISDKRKSQVGSGSR 356

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R++DHRI  T + L+  L G I   I  +    Q + +   +
Sbjct: 357 SEKIRTYNWKDSRVSDHRIG-TNFPLQTFLDGDIKGAIGAMQALEQQEKLAELN 409


>gi|300867105|ref|ZP_07111771.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
 gi|300334860|emb|CBN56937.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
          Length = 365

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 136/354 (38%), Positives = 231/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  F E+  RM++       + + ++ +  +++  +++   ++ + ++      
Sbjct: 8   DKLKSVEQTFNELTRRMADPDVAKDPNEFQRVAKARSSLEEVVNTFELWKETQENLAGAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E++++A +EV  +E +   LE+ +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QILKESASDPEMQEMASLEVGELEDKSDYLESRLKVLLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++  DL RMY RYA  + W+V++LS S  +  G+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAADLVRMYSRYAQSQNWQVKMLSESVGESRGFKEAILEIQGDSVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVAV+PE  ++++ I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAVMPEVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
             + H PTGI +  + E+SQ QN+ RAM++LRA+LY+++ +   +E ++ R+ Q+G+G R
Sbjct: 248 ADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQDEVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+    + L  +L+G IDD+I   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRATDHRLG-ENFSLNTILEGDIDDVIQACISLDQQERLAELA 360


>gi|257056964|ref|YP_003134796.1| peptide chain release factor 1 [Saccharomonospora viridis DSM
           43017]
 gi|256586836|gb|ACU97969.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharomonospora
           viridis DSM 43017]
          Length = 358

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 145/361 (40%), Positives = 222/361 (61%), Gaps = 16/361 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  + +  L + +AE+E ++++           KL   Y+ +SP++  +   +  + E +
Sbjct: 1   MESESLRGLLDEYAELEKQLADPAVHADQARARKLGRRYSELSPVVKTVGELETTRSELE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +  + +S +E  D        + K +  LE ++  LLLP+D  D    ++EI++G 
Sbjct: 61  AAKELAAEDSSFAEEVD-------RLGKRVSALETKLAELLLPRDPYDGSDVVMEIKSGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSR 175
           GG E+ALF GDL RMY R+A  + W  E+L ++ +D GGYK++  ++        GV++ 
Sbjct: 114 GGEESALFAGDLLRMYLRFAERQGWTAEILDATPSDLGGYKDVTVSVKSKGTEAEGVWAC 173

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           +KFE GVHRVQRVPATE+ GR+HTSAA V + PE  EI+V+I   D+RID  R+SG GGQ
Sbjct: 174 LKFEGGVHRVQRVPATESQGRIHTSAAGVLIYPEPEEIEVEIDPNDLRIDVFRSSGPGGQ 233

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVR+TH+PTGI+V   +EKSQ QNR RA++VL+ARL  +  +  A + +  R+
Sbjct: 234 SVNTTDSAVRVTHLPTGIVVSCQNEKSQIQNRARAIQVLQARLQALAEEEAAAKAADARR 293

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            Q+ + DRSER+RTYNF + RI+DHR+N   Y L+ VL G +  ++  L  A + + +  
Sbjct: 294 SQVRTVDRSERVRTYNFPENRISDHRVNYKAYNLDQVLDGELSGVLEALRAADREERMAQ 353

Query: 355 A 355
           A
Sbjct: 354 A 354


>gi|118475342|ref|YP_892837.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus
           82-40]
 gi|166223541|sp|A0RRK4|RF1_CAMFF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118414568|gb|ABK82988.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 355

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 169/358 (47%), Positives = 240/358 (67%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    +R+ E+   +S+   ++      KL++E   +  I      Y       +
Sbjct: 1   MLADKLRPFIDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +  T++     D E+ +LA+ E+ A+E E+ +LE EI  LLLPKD +D+K+  LE+RAGT
Sbjct: 61  ENKTLLE----DPELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFVGDL   Y RY   R +K E++SSS+   GGYKE++  I G G +SR+K+E 
Sbjct: 117 GGDEAALFVGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTSA TVA++PE  + ++DI   D++ID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRVHTSAITVAIMPEVEDSEIDINPNDLKIDVMRSSGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+THIPTG++V     KSQH+N+  A+KVL+ARLYD++ +    + S  RK Q+G+
Sbjct: 237 DSAVRVTHIPTGLVVVNQDGKSQHKNKDAAIKVLKARLYDMQERERREKESKERKDQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRS RIRTYN+ Q RI+DHRINLTLY+L+ ++  G  D+II+PL+  +QA+ I +A 
Sbjct: 297 GDRSGRIRTYNYPQNRISDHRINLTLYRLDAIMAAGLFDEIIDPLIAHYQAEAIANAG 354


>gi|328947853|ref|YP_004365190.1| peptide chain release factor 1 [Treponema succinifaciens DSM 2489]
 gi|328448177|gb|AEB13893.1| Peptide chain release factor 1 [Treponema succinifaciens DSM 2489]
          Length = 361

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 153/359 (42%), Positives = 234/359 (65%), Gaps = 5/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEE 59
               K++ DL  R+  +   + ++  +    K      E+  ++ ++S    Y +  +  
Sbjct: 1   MDLIKKLEDLSVRYTVVSELIGDASLIKDQKKYKETMREHQQLTELMSLYDEYKKILKGI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   +I +   D ++++LA+ E+  +E++  +LE EI   L+P D  D+K+ ILEIR+ 
Sbjct: 61  EDATVLITEEE-DRDMKELAREELKELEEKKPKLEEEIKLKLIPPDPLDEKNIILEIRSA 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA+LFV DL+ MY   A  + WK E + + + + GG+ +IV +I+G+ V+  +++E
Sbjct: 120 AGGDEASLFVRDLWEMYMHLAERKGWKTETMEAQETEVGGFNKIVTSIAGKFVYGTLRWE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVPATE+ GR+ TS  TVAVLPEA E ++ I  ED+R+D MRA G GGQ VNT
Sbjct: 180 SGVHRVQRVPATESQGRLQTSTVTVAVLPEAEETEIQIRPEDVRVDVMRAGGPGGQCVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+THIPTGI+V    EKSQH+N+ +A +VLRARL+D+E  +  +ER+  RK  +G
Sbjct: 240 TDSAVRLTHIPTGIVVIQQDEKSQHKNKDKAFRVLRARLFDLEESKRQSERADARKNMVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SG RSE+IRTYNF Q R+TDHRINL+L+ L   + G +D++++ L    + + +  +S+
Sbjct: 300 SGARSEKIRTYNFPQDRVTDHRINLSLHNLPSFMMGNMDEMLDALNVYAKEEQLKDSSD 358


>gi|154149107|ref|YP_001407141.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381]
 gi|166223542|sp|A7I3Q0|RF1_CAMHC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|153805116|gb|ABS52123.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381]
          Length = 355

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 240/354 (67%), Gaps = 9/354 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++     R+ EI   +S+   +       KL++E  +I P+ +    Y +  +  +
Sbjct: 1   MLADRLKPFLKRYDEISESLSDPKILSDISLVTKLSKEQRSIEPVRNATLQYLEVLKNIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  ++I    +D+E+ DLA+ E+  +E    +LE EI  LL+PKD +D+K+  LEIRAGT
Sbjct: 61  DNKSLI----NDTELGDLAKEELKNLEISQNKLEEEIKILLIPKDPNDEKNIFLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF GDL   Y RYA LR +K E++S S+   GG+KE++  + G G +SR+KFE 
Sbjct: 117 GGDEAALFAGDLLDAYLRYAELRGYKTEIVSQSEGSAGGFKEVILLVKGDGAYSRLKFEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTSA TVA++PE  + ++ I   D+RID MRASG GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRVHTSAITVAIMPEIEDSEIQINENDLRIDVMRASGHGGQCVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTG++VT    KSQH+N+  AMKVL+ARLYD++ K    +  + RK Q+G+
Sbjct: 237 DSAVRITHIPTGLVVTNQDGKSQHKNKEAAMKVLKARLYDLQEKERKAKEQSERKDQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMI 352
           GDRS RIRTYN+ Q RITDHRINLTLY+L+ ++ G + D+II+PL+   QA+ I
Sbjct: 297 GDRSGRIRTYNYPQNRITDHRINLTLYRLDAIMAGGLFDEIIDPLIAHAQAEAI 350


>gi|254382315|ref|ZP_04997675.1| peptide chain release factor 1 [Streptomyces sp. Mg1]
 gi|194341220|gb|EDX22186.1| peptide chain release factor 1 [Streptomyces sp. Mg1]
          Length = 359

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 147/363 (40%), Positives = 220/363 (60%), Gaps = 21/363 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI++    + Q  ++ +   
Sbjct: 3   EAVEELIGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRAWKQSAEDIETAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D             EV  +  +  EL  ++  LL+P+D  DDK  +LE++AG GG 
Sbjct: 63  EFAADDPD-------FAAEVKELSAQREELTEKLRLLLVPRDPSDDKDVLLEVKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ +++++ GGYK++  ++            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVSVRTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E++V+I + D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVEVEINMNDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITHIPTG++    +EKSQ QN+ +AM++LR+RL    ++    E S  
Sbjct: 236 GQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDV 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           R+ Q+ S DRSE+IRTYN+ + RI+DHR     Y L+ VL G +D II   +    A  +
Sbjct: 296 RRSQVRSVDRSEKIRTYNYPENRISDHRTGFKAYNLDQVLDGDLDSIIQACVDTDSAAKL 355

Query: 353 GSA 355
            +A
Sbjct: 356 AAA 358


>gi|75906944|ref|YP_321240.1| peptide chain release factor 1 [Anabaena variabilis ATCC 29413]
 gi|119361508|sp|Q3MF91|RF1_ANAVT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|75700669|gb|ABA20345.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena
           variabilis ATCC 29413]
          Length = 366

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 143/354 (40%), Positives = 237/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F E+  R+++     + D Y K+ +  +++  +++    +   ++E     
Sbjct: 8   EKLKSVEQTFNELTRRLADPDTARNPDEYQKIAKSRSSLEEVVNTYETWKIAQEELIGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V+ + NSD E++++A +EV  +E++I+ LE  +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QVLKESNSDPELQEIAALEVNELEEKIKYLETRLKVLLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + W+V+++S S  + GG+KE++  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGDSVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GRVHTS ATVA++PE  E+++ I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QN+ RAM++LRA+LY+++ +    E ++ R+ Q+G+G R
Sbjct: 248 VDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEEVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+      L  VL+G ++ +I   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDSRATDHRLGQNFS-LNPVLEGDLETVIQSCISQDQQERLAELA 360


>gi|167629003|ref|YP_001679502.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
 gi|238687991|sp|B0TI71|RF1_HELMI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167591743|gb|ABZ83491.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
          Length = 354

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 248/356 (69%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++ ++ E+   +S+   +     + +  ++ A ++ I+     Y    Q   D
Sbjct: 1   MIDKLEIIEQKYDELTQLLSDPEIIQDQTRWQRHAKQQAGMTEIVDTFRAYKGVLQGIDD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  SD E++++A +E+  +     ELE  +  LLLPKD +DDK+ I+EIRAGTG
Sbjct: 61  ARAMLAE--SDPELQEMASLELDELLARKEELEQRLKVLLLPKDPNDDKNVIIEIRAGTG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF GDL+RMY R+A  + W+ E+LS++  D GG+KE++  I G+G FS++KFESG
Sbjct: 119 GEEAALFAGDLYRMYSRFADRQGWRTELLSANYTDIGGFKEVIVLIEGQGAFSKLKFESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE+SGR+HTSAATVAVLPEA E+++++   ++RID   +SG+GGQHVN T+
Sbjct: 179 VHRVQRVPATESSGRIHTSAATVAVLPEAEEVEIEVNPNELRIDVFCSSGAGGQHVNKTE 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+V    EKSQ +NR +AM+VLRARL +  R+    E ++ RK  +GSG
Sbjct: 239 SAVRITHLPTGIVVSCQDEKSQLKNREKAMRVLRARLLEKAREEQHGEMASARKSMVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF QGR+TDHRI LTL++LE +L G +D++++ L+T  QA+ + +  
Sbjct: 299 DRSERIRTYNFPQGRVTDHRIGLTLHRLETILDGDLDELLDALITTDQAEKLKTME 354


>gi|139439315|ref|ZP_01772757.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC
           25986]
 gi|133775339|gb|EBA39159.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC
           25986]
          Length = 355

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 156/356 (43%), Positives = 227/356 (63%), Gaps = 7/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +   + E+E ++S+      +  + +L +EYA  S +I+    Y     + + 
Sbjct: 1   MRDKLEKIIKAYEELEKKLSDPAVASDIKEFTRLNKEYAHQSDLIAASREYIGALDDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D  +D++ +++ Q+++   E+++ +LE +I Y+L+P D +DDK+ I+EIR+  G
Sbjct: 61  AKEMLRDT-TDADEKEMLQMDISENEEKLPQLEEDIKYMLIPSDPNDDKNTIVEIRSAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDL++MY+R+   R WK  VL SS ++ GG+K I   + G  V+S MKFESG
Sbjct: 120 GDEAAIFAGDLYKMYQRFCESRGWKTTVLDSSPSEAGGFKSIEFKVEGDRVYSVMKFESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+ TS ATVAVLPEA EIDV I   D+RIDT  ASG GGQ VNTT 
Sbjct: 180 VHRVQRVPKTESQGRIQTSTATVAVLPEAEEIDVQINQSDLRIDTYCASGPGGQCVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY++E ++   E  A R+ QIG G
Sbjct: 240 SAVRITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAELGAERQSQIGHG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           +RSE+IRTYN  Q R+TDHRI         VL G  +  +I  L  A +A+ +  A
Sbjct: 300 NRSEKIRTYNQPQDRVTDHRIGFNSTY-NGVLLGDQLGTVIEALAAAERAEKLAQA 354


>gi|297567138|ref|YP_003686110.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946]
 gi|296851587|gb|ADH64602.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946]
          Length = 364

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 144/356 (40%), Positives = 226/356 (63%), Gaps = 8/356 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L+  +  +E  +++   +     Y +L++ YA +  +++ I  Y +   + ++
Sbjct: 1   MLEKLESLEQEYQSLEASLADPAVLSDQREYQRLSKRYAEMGELVATIREYKKAHSDLEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             +++     D ++ ++A++EV  I + I ELE ++  LLLPKD  DDK+ I+EIRAGTG
Sbjct: 61  AKSLL----HDPDMAEMARLEVEEIRRRIPELEAKLELLLLPKDPLDDKNVIVEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L  M   +A  + ++ E+L  +  D GG  ++   + G G +  +K+E+G
Sbjct: 117 GEEAALFAAELRDMIMEFARRKGFRTEILDVNLTDLGGVSKVSFEVIGAGAYGVLKYEAG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATEA GR+HTS ATVAV+PEA E+DV++   D+ I   RASG GGQ VNTTD
Sbjct: 177 VHRVQRVPATEAQGRIHTSTATVAVMPEAEEVDVELDPADLEITVSRASGPGGQGVNTTD 236

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAV++ H PTG++V     +SQ +N+ +A+ +LR+RL +++R   A  R  +R  QIG+G
Sbjct: 237 SAVQVLHKPTGMIVSCMESRSQIKNKEKALTILRSRLLEMKRAEEAARRREDRLAQIGAG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSE+IRTYNF Q R+TDHRI  T + LE VL G + ++   L  A Q + + + +
Sbjct: 297 ERSEKIRTYNFPQSRVTDHRIGFTTHNLEGVLSGDLFELHEALKRADQERQLAAIA 352


>gi|42521715|ref|NP_967095.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus
           HD100]
 gi|61214632|sp|Q6MRK9|RF1_BDEBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39574245|emb|CAE77749.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus
           HD100]
          Length = 357

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 233/350 (66%), Gaps = 5/350 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  +++R+ E+ + +           Y  L +E   +  I+     Y +K +  +    
Sbjct: 4   KLDAVESRYEEVNMALQRPDIASNQTQYRALMKELGNLEKIVLVYRDYRKKTENLKASKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D+E+R+L + EV  +E E+ +LE ++   L+PKD +DDK+ ILEIRAG GG E
Sbjct: 64  LLT-AEQDAEMRELIREEVKELEAELPDLEQQLKIALIPKDPNDDKNTILEIRAGAGGDE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF  +LFR Y  YA+ + WKVE++S S+ + GG KEI+A+I+G  VFS+MK+ESGVHR
Sbjct: 123 AALFADELFRGYVHYASTQGWKVEMISFSEGNAGGAKEIIASITGDSVFSKMKYESGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA+GR+HTS  TVAV+PE    ++ IP+ D+RI+TMR+ GSGGQ VN T+SAV
Sbjct: 183 VQRVPKTEAAGRIHTSTVTVAVIPEVEVSEIKIPMSDVRIETMRSQGSGGQSVNRTESAV 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+ H+PTGI V     KSQ  NR RA ++L A+L  +E ++   E S  R  QIG+GDRS
Sbjct: 243 RVVHLPTGIDVKCQEGKSQSTNRERAFQILYAKLQQIEDEKARKEASDVRLEQIGTGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           ERIRTYNF Q RITDHRI LT+++L+ V+ G  + +I+PL+   QA+ + 
Sbjct: 303 ERIRTYNFPQTRITDHRIGLTIHQLDQVMSGSFELLIDPLIANFQAEALK 352


>gi|73748899|ref|YP_308138.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1]
 gi|147669660|ref|YP_001214478.1| peptide chain release factor 1 [Dehalococcoides sp. BAV1]
 gi|289432895|ref|YP_003462768.1| peptide chain release factor 1 [Dehalococcoides sp. GT]
 gi|119361532|sp|Q3ZYA9|RF1_DEHSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039969|sp|A5FQC5|RF1_DEHSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|73660615|emb|CAI83222.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1]
 gi|146270608|gb|ABQ17600.1| bacterial peptide chain release factor 1 (bRF-1) [Dehalococcoides
           sp. BAV1]
 gi|288946615|gb|ADC74312.1| peptide chain release factor 1 [Dehalococcoides sp. GT]
          Length = 355

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 239/353 (67%), Gaps = 5/353 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ + + RF EIE  +S+   ++       L +E A +   +     Y    +E ++
Sbjct: 1   MLERLENCEKRFIEIEEEISKPEVINDARLVRTLAQERADLQDKVEMYRRYKTMAKELEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +   D ++R + + E+  +EK + +L  ++ + LLPKD +DDKS I+EIRAGTG
Sbjct: 61  AKNLL-ESEKDEDMRGMVRGEIENLEKSLTDLYEQMTFELLPKDPNDDKSIIMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  DL++MY RYA L+ WK EV+  + N  G  KE+V  ++G+G FSR+K+E G
Sbjct: 120 GDEAGLFASDLYKMYIRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEASGR+HTS ATVAVLP+  E+D+DI ++++R+D   +SG+GGQ+V    
Sbjct: 180 VHRVQRVPQTEASGRIHTSTATVAVLPQVEEVDIDINMDEVRVDIFHSSGAGGQNVQKVA 239

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +A+R+TH+PTG++V   + +SQ +N+ +A  VLRARL ++E+ ++  ER+ +R+ Q+G  
Sbjct: 240 TAIRLTHMPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQA 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSE+IRTYNF Q R+TDHRI LT + L ++L+GY+D+II+ L T  Q +++ 
Sbjct: 300 DRSEKIRTYNFPQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQTELLK 352


>gi|297622890|ref|YP_003704324.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093]
 gi|297164070|gb|ADI13781.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093]
          Length = 373

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 156/359 (43%), Positives = 219/359 (61%), Gaps = 11/359 (3%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ +L+  F E+E  + +   +     Y +    Y+ +  I+     Y       Q+
Sbjct: 1   MIEKLENLRREFDELEASLGDPELIADQARYREAMGRYSELQTIVRTYREYKDLVDGLQN 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               +     D E+ ++A+ E+ A+E ++  LE  +  LLLPKD  DDK+ I+EIRA  G
Sbjct: 61  AREALA----DPELAEMAREEIAALEPQLEALERRLERLLLPKDPFDDKNVIVEIRAAAG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  ++F MY RYA  + +K EVL S  +  GG+ ++   I GRG +S+ KFESG
Sbjct: 117 GDEASLFAAEVFEMYRRYAEAQGFKTEVLDSHPSSVGGFSKVSFEILGRGAYSKFKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTS  TVAVLPEA ++DV +   D R+D  R+SG GGQ VNTTD
Sbjct: 177 VHRVQRVPATETQGRIHTSTVTVAVLPEAEDVDVQLSPADYRVDVFRSSGPGGQSVNTTD 236

Query: 242 SAVRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           SAVRIT+ P      ++     KSQ +N+ +A+ VLRARL + ER+R A E    R +QI
Sbjct: 237 SAVRITYKPGTSDEIVVTCQDGKSQIKNKEKALAVLRARLLERERERAAAEAREARLVQI 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GSG+RSE+IRTYNF Q RITDHRI  T + L  VL G +D++   L +A Q + +G  +
Sbjct: 297 GSGERSEKIRTYNFPQSRITDHRIGYTTHNLSDVLLGKLDELTEALSSAEQQEQLGRLA 355


>gi|325971906|ref|YP_004248097.1| peptide chain release factor 1 [Spirochaeta sp. Buddy]
 gi|324027144|gb|ADY13903.1| Peptide chain release factor 1 [Spirochaeta sp. Buddy]
          Length = 354

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             K++ + + + A+I+ ++S   ++     Y  L +E + ++PII ++ +    + +   
Sbjct: 1   MLKKLPEYEKQLADIDEKLSRPETMQDMKLYKSLNQERSHLAPIIDQLQLMHSLQTQIIG 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            H ++ +  +D E+ ++ + E+  +E E+   E +   LL+P D  + K  I+EIRAGTG
Sbjct: 61  AHQLMKEE-TDQEMLEMTREELHELENELEVCEKKTKMLLIPPDPLEGKDIIMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY  YA  + WK+E+LSS++   GGYKE+V +ISG+ V+  +++ESG
Sbjct: 120 GEEAALFAANLFRMYSHYADEKGWKMEILSSNETGIGGYKELVISISGKDVYGSLRWESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTSA TVAVLPEA E D++I  ED++ID MRA G GGQ VNTTD
Sbjct: 180 VHRVQRVPETESGGRIHTSAVTVAVLPEAEETDIEIRQEDLKIDVMRAGGPGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTG++V    EKSQ +NR +A++VLR+RL+D+E  +   ER+  RK Q+GSG
Sbjct: 240 SAVRLTHLPTGLVVICQDEKSQIKNRAKALRVLRSRLFDLEEDKKNRERAEARKSQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF Q R+TDHRINLTLYKLE +++G +D+++  L  A     +  
Sbjct: 300 DRSERIRTYNFPQNRLTDHRINLTLYKLELIMEGQLDEVVEGLKIAAGEAALKE 353


>gi|47558934|gb|AAT35567.1| protein release factor 1 [Chlamydia trachomatis]
          Length = 359

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 173/348 (49%), Positives = 230/348 (66%), Gaps = 7/348 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
              ++ +   R  E+E ++S+        +   L++E+A +S I +        K+  QD
Sbjct: 1   MEIKVLECLKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D EI  + +  VL  E+ +  L  ++  LL+P D DDD S I+E+RAGTG
Sbjct: 61  -DKLALSTEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YAA + W+ EVLS+S++D GGYKE V  ISG  V   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA TVAVLPE AE D +  I  +D+RIDT R+SG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIP+G++V    E+SQH+N+ +AM+VL+AR+ D E ++ A E SA R  Q+G
Sbjct: 240 TDSAVRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           SGDRSERIRTYNF Q R+TDHRI LTLY L+ V++G +D I   L+T 
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRIALTLYNLDRVMEGELDMITTALVTH 347


>gi|218296205|ref|ZP_03496961.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23]
 gi|218243277|gb|EED09807.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23]
          Length = 354

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 151/338 (44%), Positives = 216/338 (63%), Gaps = 8/338 (2%)

Query: 24  SESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQ 80
           ++   +     Y  L+  YA +  II+ I  Y +  ++ + + +++     D E+R++A+
Sbjct: 20  ADPEVLKDQKRYQALSRRYAEMGEIIALIREYRKVLEDLEGVESLLE----DPELREVAK 75

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
            E  A+      LE E+   LLPKD  D++  I+EIRAGTGG EAALF  DL  MY R+A
Sbjct: 76  AEKEALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFA 135

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++ E+L S+  D GG+ ++V  + G G +   K+ESGVHRVQRVPATE  GR+HTS
Sbjct: 136 EEMGFETEILDSNPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTS 195

Query: 201 AATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            ATVAVLP+A E D  + ++++RID MRASG GGQ VNTTDSAVR+ H+PTGIMV     
Sbjct: 196 TATVAVLPKAEESDFQLNMDEVRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDS 255

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQ +NR +A+ +LR+RL +++R   A +    R  QIG+G+RSE+IRTYNF Q R+TDH
Sbjct: 256 RSQIKNREKALMILRSRLLEMKRAEEAEKLRQARLAQIGTGERSEKIRTYNFPQSRVTDH 315

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RI  T + LE VL G +  ++  L  A Q + + + +E
Sbjct: 316 RIGFTTHDLEGVLSGKLQPLLEALKRADQERQLEAMTE 353


>gi|257791638|ref|YP_003182244.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243]
 gi|257475535|gb|ACV55855.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243]
          Length = 352

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 158/357 (44%), Positives = 224/357 (62%), Gaps = 12/357 (3%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +   + +++ +M +   +    +   L +EYA   P+  K   Y Q   +  +
Sbjct: 1   MREKLTKIIEAYEDVQAKMGDPAVLADQKEYNRLAKEYANQGPLAKKAREYVQAADDLAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D ++++ A  E+  IE ++  LE +I ++L+P D  DDK  I+EIRA  G
Sbjct: 61  AREMLA----DPDMKEFALEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F G+L++MYER+A+ + WK E +  S ++ GG+KEI   + G  V+S MKFESG
Sbjct: 117 GDEAAIFAGELYKMYERFASAQGWKTETMDMSASEAGGFKEIQFKVKGDHVYSVMKFESG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPEA E++V+I   D+RID  RA G GGQ VNTTD
Sbjct: 177 VHRVQRVPKTESQGRIHTSTATVAVLPEADEVEVEINENDLRIDVYRAGGPGGQCVNTTD 236

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+P+G++V +  +KSQ QN++ AM VLRARLY+           A R  QIGSG
Sbjct: 237 SAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQAAEGAKRLAQIGSG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSE+IRTYN  Q R+TDHRI     Y    VL G  + D+I  L  A +A+ + +A
Sbjct: 297 DRSEKIRTYNGPQDRVTDHRIGFNGTYN--GVLLGDGLGDVITALQAADRAQKLEAA 351


>gi|226492409|ref|NP_001142228.1| hypothetical protein LOC100274396 [Zea mays]
 gi|194707706|gb|ACF87937.1| unknown [Zea mays]
          Length = 416

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 247/356 (69%), Gaps = 3/356 (0%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +  +++  ++ R A ++ ++++   S + Y +  +E+  +   +  I     K++E + L
Sbjct: 60  IMEQRMKLIEQRSAYLQEQINQPAASPEEYSRANKEFRKLESTMELIKDLRSKQEEIEGL 119

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            +++ + + + ++R++A+ E+L   +E + L++E+   LLPKD  D+K CILE+RAGTGG
Sbjct: 120 KSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGG 179

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF  D+FRMYE+YA    WK +V+   ++   GYKE   TISG G F ++KFESG+
Sbjct: 180 EEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGI 239

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE SGR+HTSA +VAVLP+A E+DV +  ED+RIDT R+ GSGGQ VNTTDS
Sbjct: 240 HRVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDS 299

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTG +V    E+SQH N+ +A+KVLRARLY++ER+R+  +RS  R  QIGSGD
Sbjct: 300 AVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSEQIGSGD 359

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHR+ +T + +  V++G  +D  ++ LL   +   I S  
Sbjct: 360 RSERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQEEMDAIASFG 415


>gi|189182919|ref|YP_001936704.1| peptide chain release factor 1 [Orientia tsutsugamushi str. Ikeda]
 gi|238692229|sp|B3CQD1|RF1_ORITI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189179690|dbj|BAG39470.1| peptide chain release factor RF-1 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 359

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 183/351 (52%), Positives = 263/351 (74%), Gaps = 4/351 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL-TEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +  +  ++ ++E  ++     +  + L ++EY+ + PII K++ Y +  +  + L  VI 
Sbjct: 7   LNKILQKYQDLEADLNGGKLDNKELALISKEYSNLKPIIEKLNRYLKAHENIKYLQQVI- 65

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D   D E++ +A++E+      + +LE E+   LLPK++DD K+ I+E+RAGTGG EAAL
Sbjct: 66  DTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKESDDHKNAIIEVRAGTGGDEAAL 125

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   LF+MY RYA  +KWK E+LS SD + GGYKE  A ISG GVF+ +KFESGVHRVQR
Sbjct: 126 FAASLFQMYNRYAERKKWKFELLSISDTEIGGYKEASALISGNGVFANLKFESGVHRVQR 185

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           +P TE++GR+HTSAATV VLPEA E+DV I  +D++IDT RASG+GGQHVNTTDSAVRIT
Sbjct: 186 IPKTESNGRIHTSAATVVVLPEAEEVDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVRIT 245

Query: 248 HIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG++V+  + KSQH+N+ +AMK+L ARLYD+E+++   E++ +RK+Q+G+GDRSERI
Sbjct: 246 HIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQKSQQEQAMSRKVQVGTGDRSERI 305

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           RTYN+ QGR+TDHRINLTLYK+E ++ +G +D+IIN L++ ++AK I  ++
Sbjct: 306 RTYNYPQGRVTDHRINLTLYKIEEIIQEGKLDEIINNLISENEAKKIADSN 356


>gi|332526537|ref|ZP_08402649.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
 gi|332110805|gb|EGJ10982.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
          Length = 351

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 164/347 (47%), Positives = 236/347 (68%), Gaps = 6/347 (1%)

Query: 15  RFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R AE++  +++      V     L+ E + ++ ++ +   Y Q++Q+      ++    S
Sbjct: 2   RLAELDALLADPQVAADVKRLRTLSREQSEVADVVGRWRRYLQREQDLAAAREMLV-AES 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D+E+  +A+ EV+  E ++  LE+E+   L+P+D DD ++  +EIRAGTGG E+ALF GD
Sbjct: 61  DAEMAAMAEQEVVDAEADLARLEHELQLALIPRDPDDARNAFVEIRAGTGGDESALFAGD 120

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY RY   + W+VEV+S+S+++ GGYKE+V  + G  VF  ++FESG HRVQRVPAT
Sbjct: 121 LARMYLRYFERQGWRVEVMSASESELGGYKELVLKVDGTDVFGTLRFESGGHRVQRVPAT 180

Query: 192 EASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           EA GR+HTSA TVAV+PE  E  +V +   ++RIDT RASG+GGQHVN TDSA+RITH+P
Sbjct: 181 EAQGRIHTSACTVAVMPEPDEAEEVQLNPAELRIDTFRASGAGGQHVNKTDSAIRITHLP 240

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI+     ++SQH+N+ +AM VL ARL + +R   A + +A RK  +GSGDRS+RIRTY
Sbjct: 241 TGIVAECQDDRSQHRNKAKAMAVLAARLREKDRAERAAKEAATRKSLVGSGDRSDRIRTY 300

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           NF QGR+TDHRINLTLYKL  ++ G +DD++  L  A  A+ +    
Sbjct: 301 NFPQGRLTDHRINLTLYKLGQIMDGELDDVVAALKAARAAEQLAQLE 347


>gi|254455525|ref|ZP_05068954.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082527|gb|EDZ59953.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 357

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 175/356 (49%), Positives = 247/356 (69%), Gaps = 3/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  K I +L  + + +E  +S        + + ++EY+ IS +I     Y   ++++++
Sbjct: 1   MIPIKTIEELILKHSTLEKDLSSRDLEKKVFAEKSKEYSDISEVIVSAKKYLSYEKDKKE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D++ D E++ LA  E+L ++ E    E ++   LLPKD  D K+ I+EIRAGTG
Sbjct: 61  LENILNDNSVDEELKKLADTELLELKDEYERNEKKLKLFLLPKDEADKKNAIIEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  DLF+MYE+ +  +KW +E++S S +D GG KE++A+I G  ++S +K+ESG
Sbjct: 121 GLEASLFASDLFKMYEKVSHKKKWALELISISRSDAGGLKEVIASIKGTNIYSTLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+D+ I   D+RID  RA G GGQ VNTTD
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDLKINEADLRIDVFRAGGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTG+ V+  + KSQH+N+ + MK+LR+RLY++ER R+  ERS +RK +IG+G
Sbjct: 241 SAVRITHIPTGLTVSQQDEKSQHKNKAKGMKILRSRLYELERSRIDQERSQDRKTKIGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLTL++LE  L+G   D++I  L    Q   + + 
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHRLEEFLEGEAFDEMIESLTLQAQEDSLSNL 356


>gi|251799802|ref|YP_003014533.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2]
 gi|247547428|gb|ACT04447.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2]
          Length = 356

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 148/353 (41%), Positives = 238/353 (67%), Gaps = 5/353 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L +R+ ++   + +        +L   ++E + +       + Y Q  ++ +D
Sbjct: 1   MLDRLQALADRYEKLSELLCDPDVASDPKRLREYSKEQSDLQEAYEAFTEYKQVSEQLED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              + G+   D E+R++ ++E+  + +    L+ +I  +LLPKD +DDK+ I+EIR   G
Sbjct: 61  AKLMQGEKLDD-EMREMVKMEIDELTERKTALDEKIRIVLLPKDPNDDKNVIVEIRGAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L+RMY ++A  + W+ E++  ++ND GG+KE++  I+G+G +S+MK+ESG
Sbjct: 120 GDEAALFAYELYRMYTKFADAQGWRCELMDLNENDLGGFKEVIFMITGKGAYSKMKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQR+P TE+ GR+HTS +TV+V+PE  E++V+I  +DIRIDT  +SG+GGQ VNTT 
Sbjct: 180 AHRVQRIPVTESGGRIHTSTSTVSVMPEVEEVEVEILDKDIRIDTFCSSGAGGQSVNTTK 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H+PTGIM      KSQ++N+ +A++VLRAR+ D+ R+    + +  RKL++G+G
Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARISDIRRQEEEAKYAGERKLKVGTG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSERIRTYNF Q R+TDHRI LTL+KL+ V+ G + +I++ L  A QA+++ 
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLHKLDSVMNGDMAEIVSSLTIAEQAELME 352


>gi|291297042|ref|YP_003508440.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279]
 gi|290472001|gb|ADD29420.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279]
          Length = 358

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 151/356 (42%), Positives = 223/356 (62%), Gaps = 8/356 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  L+  +  +E ++++   +     Y ++++ YA +  ++  I  Y +      +
Sbjct: 1   MLEKLESLEAEYQALERQLADPAVLANQSEYQRISKRYAEMGHLVETIRSYKEALTHLAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D E+ ++A+ ++ A+E  IRELE E+  LLLPKD  D+K+ I+EIRAGTG
Sbjct: 61  AREL----QFDPELGEMARADIAALEPRIRELEAELELLLLPKDPLDEKNAIVEIRAGTG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +L  M   YA    ++VEVL +S  D GG  ++V  +SG G +  +K+E+G
Sbjct: 117 GEEAALFAAELRDMIMEYAKQGGYRVEVLDTSLTDLGGVSKVVFEVSGPGAYGYLKYEAG 176

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GR+HTS ATVAV+PEA E+DV I   D+ I   RASG GGQ VNTTD
Sbjct: 177 VHRVQRVPATETQGRIHTSTATVAVMPEAEEVDVQIDPADLEITVSRASGPGGQGVNTTD 236

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAV++ H PTG++V     +SQ +N+ +A+ +LR+RL +++R   A  R  +R  QIG+G
Sbjct: 237 SAVQVLHKPTGMIVSCMESRSQIKNKEKALSILRSRLLEMKRAEEAARRREDRLAQIGAG 296

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSE+IRTYNF Q R+TDHRI  T + LE VL G +  +   L  A Q + + + S
Sbjct: 297 ERSEKIRTYNFPQSRVTDHRIGFTTHDLEGVLAGDLSKLHEALRKADQERQLEALS 352


>gi|226307404|ref|YP_002767364.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
 gi|229489997|ref|ZP_04383850.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
 gi|226186521|dbj|BAH34625.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
 gi|229323098|gb|EEN88866.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
          Length = 359

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 151/356 (42%), Positives = 213/356 (59%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+    A +E +MS+    +      ++ + ++ +SPI+S  +     + + +    +
Sbjct: 10  IDDILAEHAGLEAQMSDPALHNDPAAARRVGKRFSELSPIMSTYNKLTAAQDDLEAAREL 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D +S          E+  +E E+ +LE  +   L P+D  D    +LE+++G GG E+
Sbjct: 70  AADDSS-------FAAEIPDLEAEVAQLEQTLTDQLAPRDPHDGDDIVLEVKSGEGGEES 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF  DL RMY RYA    W+VE+L ++ +D GGYKE   +I  +      V++R+KFE 
Sbjct: 123 ALFASDLARMYVRYAERHGWRVEILDATVSDLGGYKEATLSIKSKSDTPDGVWARLKFEG 182

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V V PE  E   V I   D+RID  R+SG GGQ VNT
Sbjct: 183 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNT 242

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL  V  +    E SA R+ Q+ 
Sbjct: 243 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQVVAEEAADAEASAGRQSQVR 302

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + RITDHRI    + L+ VL G +D +++ L  A +   + +
Sbjct: 303 TVDRSERIRTYNFPENRITDHRIGFKSHNLDAVLDGELDALLDALGKADREARLAA 358


>gi|261886265|ref|ZP_06010304.1| peptide chain release factor 1 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 355

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 166/358 (46%), Positives = 239/358 (66%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    +R+ E+   +S+   ++      KL++E   +  I      Y       +
Sbjct: 1   MLADKLRPFIDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +  T++     D E+ +LA+ E+ A+E E+ +LE EI  LLLPKD +D+K+  LE+RAGT
Sbjct: 61  ENKTLLE----DPELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFVGDL   Y RY   R +K E++SSS+   GGYKE++  I G G +SR+K+E 
Sbjct: 117 GGDEAALFVGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GRVHTSA TVA++PE  + ++DI   D++ID MR+SG GGQ VNT+
Sbjct: 177 GTHRVQRVPETESQGRVHTSAITVAIMPEVEDSEIDINPNDLKIDVMRSSGHGGQSVNTS 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
            S+VR+THIPTG++V     KSQH+N+  A+KVL+ARLYD++ +    + S  RK Q+G+
Sbjct: 237 VSSVRVTHIPTGLVVVNQDGKSQHKNKDAAIKVLKARLYDMQERERREKESKERKDQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           GDRS RIRTYN+ Q RI+DHRINLTLY+L+ ++  G  D+II+PL+  +QA+ I +A 
Sbjct: 297 GDRSGRIRTYNYPQNRISDHRINLTLYRLDAIMAAGLFDEIIDPLIAHYQAEAIANAG 354


>gi|224417848|ref|ZP_03655854.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253827187|ref|ZP_04870072.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313141390|ref|ZP_07803583.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253510593|gb|EES89252.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313130421|gb|EFR48038.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
          Length = 356

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++    +R+ EI   + ++     +    +L++E + +  ++ K   Y +  +  ++   
Sbjct: 5   KLKPFIDRYDEISNLLIQTEILSDIKRMTELSKEQSDLEKLVQKSKQYLKNLESIEENKG 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+ DLA+ E+   E E + LE+EI  LLLPKD +D+K+  LE+RAGTGG E
Sbjct: 65  LL----DDKELGDLAKEEIKEAELENQNLESEIKILLLPKDPNDEKNIYLELRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A +FVGDLF+ Y RYA  + WKVE++SSS+N+ GGYKE++A I G+G +SR+KFE G HR
Sbjct: 121 AGIFVGDLFKAYIRYAESKGWKVEIISSSENNVGGYKEVIALIKGKGAYSRLKFEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GR+HTSA TVA++PE  +++V I   D+RI+  RA G GGQ VNTTDSAV
Sbjct: 181 VQRVPETESQGRIHTSAITVAIMPEVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI V+   EKSQH+N+ +A+K+L+AR+Y+ E +    + +  RK Q+GSGDRS
Sbjct: 241 RITHIPTGISVSMQDEKSQHKNKDKALKILKARIYEAELEAQMEQNAEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYN+ Q R++DHRI LTLY LE ++  G +D +I P++   QA+ + ++ 
Sbjct: 301 ERIRTYNYPQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIAYFQAEALQNSG 354


>gi|17231677|ref|NP_488225.1| peptide chain release factor 1 [Nostoc sp. PCC 7120]
 gi|20139331|sp|Q8YPK9|RF1_ANASP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|17133320|dbj|BAB75884.1| translation releasing factor RF-1 [Nostoc sp. PCC 7120]
          Length = 366

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F E+  R+ +     + D Y K+ +  +++  ++     +   ++E     
Sbjct: 8   EKLKSVEQTFNELTRRLGDPDTAKNPDEYQKIAKSRSSLEEVVETYDNWKIAQEELIGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V+ + NSD ++ ++A +EV  +E++I  LE  +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QVLKEANSDPDMHEMAALEVKELEEKIDYLETRLKVLLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + W+V+++S S  + GG+KE++  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGESVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GRVHTS ATVA++PE  E+++ I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QN+ RAM++LRA+LY+++ +    E ++ R+ Q+G+G R
Sbjct: 248 VDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEEVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+      L  VL+G ++ +I   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDSRATDHRLGQNFS-LNPVLEGDLETVIQSCISQDQQERLAELA 360


>gi|282898327|ref|ZP_06306318.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
 gi|281196858|gb|EFA71763.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
          Length = 364

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F E+  R+++     S D Y K+ +  +++  +++    +   ++E     
Sbjct: 8   EKLKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVTAYETWKNSQEELVGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D E+ ++A IEV  +E +I  LE ++  LLLP+D +D+K+ +LEIRAGTGG 
Sbjct: 68  QILKESNGDPELHEMATIEVKDLESKIEHLEEQLKILLLPRDPNDEKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + WKV+++S S  + GG+KE++  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLLRMYSRYADTQGWKVKLVSESPGEMGGFKEVILEIQGNSVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GRVHTS ATVA++PE  +++V I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEAGGRVHTSTATVAIMPEVDDVEVHIDPKDIEMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QN+ RAM++LRA+LY+++ +      ++ R+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEAVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+      L  VL+G ++ +I   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDSRATDHRLGQNFT-LSPVLEGDLEILIQSCISQDQQERLAELA 360


>gi|330837036|ref|YP_004411677.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           coccoides DSM 17374]
 gi|329748939|gb|AEC02295.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           coccoides DSM 17374]
          Length = 354

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 236/354 (66%), Gaps = 5/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++   +   A +++++S   ++     +  L +E + + PI+ ++        + ++
Sbjct: 1   MLEKLDSFEKELAGLDMKISSPDTMKDMNLFKSLMQERSHLVPIVEELQHLKHVSSQLEE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    +D ++ ++ + E+  ++ E+    +    LL+P D    K+ I+EIRAGTG
Sbjct: 61  SLALLK-SETDPDMIEMTKEEIEGLKAEVEASTSRTKVLLIPPDPLSGKNIIMEIRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+RMY  YA  + WK+E+L+ ++   GG KE+V +ISG+ V+  +++ESG
Sbjct: 120 GEEAALFAADLYRMYTHYAEAKNWKIEILTLNETGLGGIKEVVCSISGKDVYGSLRWESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA GR+HTSA TVAVLPEA E D++I  ED+++D MR+ G GGQ VNTTD
Sbjct: 180 VHRVQRVPETEAGGRIHTSACTVAVLPEAEETDIEIRPEDLKVDVMRSGGPGGQSVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+V    EKSQ +N+ +A++VLR+RLYD+E ++ A ER+  R+ Q+GSG
Sbjct: 240 SAVRMTHLPTGIVVICQDEKSQIKNKAKALRVLRSRLYDMEEEKKAKERADARRDQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF Q R+TDHRINLTLYKL+ ++ G ++++   L  A     +  
Sbjct: 300 DRSERIRTYNFPQNRLTDHRINLTLYKLDLIMNGQLEEVTEALKIAAGEAALKE 353


>gi|148284270|ref|YP_001248360.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
 gi|166223581|sp|A5CCS8|RF1_ORITB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146739709|emb|CAM79522.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
          Length = 359

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 181/351 (51%), Positives = 262/351 (74%), Gaps = 4/351 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL-TEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +  +  ++ ++E  ++     +  + L ++EY+ + PII K++ Y +  +  + L  VI 
Sbjct: 7   LNKILQKYQDLEADLNGGKLDNKELALISKEYSNLKPIIEKLNRYLKAHENIKYLQQVI- 65

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D   D E++ +A++E+      + +LE E+   LLPK++DD K+ I+E+RAGTGG EAAL
Sbjct: 66  DTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKESDDHKNAIIEVRAGTGGDEAAL 125

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   LF+MY +YA  +KWK E+LS SD + GG KE  A ISG GVF+ +KFESGVHRVQR
Sbjct: 126 FAASLFQMYNKYAERKKWKFELLSISDTEIGGCKEASALISGNGVFANLKFESGVHRVQR 185

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           +P TE++GR+HTSAATV VLPEA E+DV I  +D++IDT RASG+GGQHVNTTDSAVRIT
Sbjct: 186 IPKTESNGRIHTSAATVVVLPEAEEVDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVRIT 245

Query: 248 HIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG++V+  + KSQH+N+ +AMK+L ARLYD+E+++   E++ +RK+Q+G+GDRSERI
Sbjct: 246 HIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQKSKQEQAISRKVQVGTGDRSERI 305

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           RTYN+ QGR+TDHRINLTLYK+E ++ +G +D+IIN L++ ++AK I  ++
Sbjct: 306 RTYNYPQGRVTDHRINLTLYKIEEIIQEGKLDEIINNLISENEAKKIADSN 356


>gi|119511149|ref|ZP_01630266.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
 gi|119464137|gb|EAW45057.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
          Length = 365

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 140/354 (39%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  F E+  R+++     + D Y K+ +  +++  +++    +    +E     
Sbjct: 8   DKLKSVEQTFHELTRRLADPDTASNPDEYQKIAKSRSSLEEVVNTYETWKIATEELAGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V+ + N D E+ ++A +EV  +E+++  LE  +  LLLP+D +D+K+ +LEIRAGTGG 
Sbjct: 68  QVLKEANGDPELHEMAALEVNELEEKLEHLEARLKVLLLPRDPNDEKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA L+ WKV+++S S  + GG+KE++  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLLRMYSRYAELQHWKVKLVSESLGEMGGFKEVILEIQGDSVYSQLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GRVHTS ATVA++PE  ++++ I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEAGGRVHTSTATVAIMPEVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
             + H PTGI +  + E+SQ QN+ RAM++LRA+LY+++     +  ++ R+ Q+G+G R
Sbjct: 248 ADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLAEQQDAVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+    Y L  VL+G ++ +I   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLG-QNYSLNPVLEGELETVIQSCISQDQQERLAELA 360


>gi|15834912|ref|NP_296671.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
 gi|270285082|ref|ZP_06194476.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
 gi|270289105|ref|ZP_06195407.1| peptide chain release factor 1 [Chlamydia muridarum Weiss]
 gi|301336478|ref|ZP_07224680.1| peptide chain release factor 1 [Chlamydia muridarum MopnTet14]
 gi|13878666|sp|Q9PL16|RF1_CHLMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|7190335|gb|AAF39160.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
          Length = 359

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 167/359 (46%), Positives = 231/359 (64%), Gaps = 8/359 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
              ++ +   R  E+E  +S+        +   L++E+A +S I +        K+   D
Sbjct: 1   MEVKVLECLRRLEEVEKLISDPNIFSNPKEYSSLSKEHARLSEIKNAHESILAAKKILHD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +      D E+  + +  +   E+ +  L  ++  LL+P D DDD S I+E+RAGTG
Sbjct: 61  -DKLALSTEKDPEMIAMLEEGIQGGEESLERLSKQLENLLIPPDPDDDLSVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YA+++ W+ EVLS+S++D GGYKE +  +SG  V   +++E+G
Sbjct: 120 GDEAALFVGDCVRMYHLYASIKGWQCEVLSASESDLGGYKEYIMGVSGTSVKRFLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA T+AVLPE AE D +  I  +D+RIDT R+SG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAVTIAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIPTG++V    E+SQH+N+ +AM+VL+AR+ D E ++   E SA R  Q+G
Sbjct: 240 TDSAVRITHIPTGVVVSCQDERSQHKNKAKAMRVLKARIRDAEVQKREQEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF Q R+TDHRI LTLY L+ V+QG +D +I   L +H  + +    E
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRIGLTLYNLDRVMQGELD-MITTALVSHAHRQLFGHEE 357


>gi|22297692|ref|NP_680939.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
 gi|32171539|sp|Q8DMG9|RF1_THEEB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22293869|dbj|BAC07701.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
          Length = 364

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 138/354 (38%), Positives = 225/354 (63%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F E+  R+++         + K+    AA+   ++    +    Q+  D  
Sbjct: 8   EKLRTVEQTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLNQQLVDAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +  ++ E+R +A+ E+  +   I +LE  +  LLLP+D +D+K+ +LEIRAG GG 
Sbjct: 68  QLHKEAANEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEIRAGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA ++ GDL RMY RYA  + W+V ++S S  + GG+KE +  I G  V+S++K+ESGVH
Sbjct: 128 EAGIWAGDLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKLKYESGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEASGR+HTS ATVAV+PE  E++V+I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEASGRIHTSTATVAVMPEVDEVEVEIDPKDIELTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ +N+ RA ++LRA+LY+++ +      ++ R+ Q+G+GDR
Sbjct: 248 VDLYHKPTGIRIFCTEERSQLKNKERAFQILRAKLYEIKLREQQEAITSMRRSQVGTGDR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+      L  VL+G ++ II   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDDRVTDHRLGQNFS-LSSVLEGDLEPIIQACISRDQQEQLAQLA 360


>gi|78778239|ref|YP_394554.1| peptide chain release factor 1 [Sulfurimonas denitrificans DSM
           1251]
 gi|119361635|sp|Q30NW2|RF1_SULDN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78498779|gb|ABB45319.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 355

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 177/358 (49%), Positives = 251/358 (70%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++    NR+ E+   +S       +     L++E +++  I+ K   Y     +  
Sbjct: 1   MLADKLTPFINRYNELGEMLSSPDITSDIKRMTTLSKERSSLEKIVEKAQEYKSVISQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++     D+E+ ++A+ E+  +E +I  LEN+I  LLLPKD +DD++ I+E+RAG 
Sbjct: 61  DTKEML----YDAEMAEMAKEELKELEIQIPILENDIKLLLLPKDPNDDRNIIVELRAGA 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+FVG+LF  Y RYA L+ WKVE+LSSS +D GGYKEI+A I G  V+SR+K+E 
Sbjct: 117 GGDEAAIFVGNLFEAYTRYADLKDWKVEILSSSPSDAGGYKEIIALIRGEQVYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVPATE+ GRVHTSA TVAV+PE  ++++ I   D++ID MR+SG GGQ VNTT
Sbjct: 177 GTHRVQRVPATESQGRVHTSAITVAVMPEVDDVEIQINENDLKIDVMRSSGCGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++VT   +KSQH+N+ +AMKVL+ARLYD+E +    + SANR  Q+G+
Sbjct: 237 DSAVRITHLPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQEAIAKDSANRSAQVGT 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSAS 356
           GDRS RIRTYN+ Q R++DHRI LTLY+L  ++QG + D+II PL+  HQ+K++ +A 
Sbjct: 297 GDRSGRIRTYNYPQNRMSDHRITLTLYRLAEIMQGGLMDEIIEPLIADHQSKIVEAAG 354


>gi|289549312|ref|YP_003474300.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
 gi|289182929|gb|ADC90173.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
          Length = 359

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 154/355 (43%), Positives = 233/355 (65%), Gaps = 8/355 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             ++   + R+ +++  + +   V     + ++++E   +  +      Y +  +E ++ 
Sbjct: 7   EDKLNLAEKRYLQLQAEVLDPDIVKDRLKFAQISKELKELEELHRLHQEYRKILKELEET 66

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ +   +   ++     +  +EKE+   E  I   LLPKD  D K+ ILEIRAG GG
Sbjct: 67  KELLKNPELEPLAKEE----IKRLEKELESTEKRIKIHLLPKDERDSKNVILEIRAGVGG 122

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  DL  MY+RYA  + WK  +LS+     GGYKE++A + G G +SR+K+ESGV
Sbjct: 123 EEAALFARDLLHMYQRYAEEKGWKFSILSAQKTGLGGYKEVIALVEGEGAYSRLKYESGV 182

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GR+HTS ATVAVLPEA E +V I  +D++I+T RAS +GGQ+VNTT++
Sbjct: 183 HRVQRVPVTEAGGRIHTSTATVAVLPEADETEVHIDPKDLKIETFRASSAGGQYVNTTET 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQ+QNR++A+K+L ARL D   ++   E +  ++ QIG+G+
Sbjct: 243 AVRITHLPTGIVVTCQDERSQYQNRMKALKILYARLKDFYDRQKREELAKEKREQIGTGE 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSE+IRTYNF Q R+TDHRINLT+Y+L+ VL+G +D+II+ L+     + + + +
Sbjct: 303 RSEKIRTYNFIQNRVTDHRINLTIYRLQDVLEGKLDEIIDALIEHDVEQKLKAMN 357


>gi|281358665|ref|ZP_06245143.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548]
 gi|281314895|gb|EFA98930.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548]
          Length = 362

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 149/360 (41%), Positives = 235/360 (65%), Gaps = 8/360 (2%)

Query: 3   FLSHK---QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKK 56
            +       I +L  RFAE+E  +++           ++++E+  +  +  K   + +  
Sbjct: 1   MVPEDIAGYIENLHGRFAELEAALADPAIYARGAECRRVSQEHRKLETLFRKFDDWRKAL 60

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
            E  D   ++    +D+E+R+L   ++  +E+  ++LE +I   LLP D +D K+ I+ I
Sbjct: 61  AELADNREMLT-AETDAELRELIAADIADLEERAQKLEADIQISLLPPDPNDAKNIIVGI 119

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +   GG EAALF G+LFR Y ++A  + W++EVL  +D + GG K++  ++SG  V+S M
Sbjct: 120 KPAAGGDEAALFAGELFRAYMKFAEKKGWRIEVLDQTDTELGGIKDVSFSLSGDEVYSLM 179

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+ESGVHRVQRVPATEA GR+HTS  TVAV+PEA E+++DI  ED+R D  R+SG GGQ 
Sbjct: 180 KYESGVHRVQRVPATEAGGRIHTSTVTVAVMPEAEEVELDIRPEDLRFDVFRSSGPGGQC 239

Query: 237 VNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVR+THIPTGI + +  EKSQH+N+  A+++L ARL + +++  A++++A+++ 
Sbjct: 240 VNTTDSAVRVTHIPTGIAVASQQEKSQHRNKEIALRILYARLLEHKQQEEADKQAADKRS 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+G+GDRSERIRTYNF Q R+TDHR N+  + L  +++G +D I++ +L     + +   
Sbjct: 300 QVGTGDRSERIRTYNFPQNRVTDHRFNVNTFDLPKLMEGELDLILDQILMIACERRLDQL 359


>gi|326332906|ref|ZP_08199163.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1]
 gi|325949264|gb|EGD41347.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1]
          Length = 359

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 152/364 (41%), Positives = 212/364 (58%), Gaps = 18/364 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEE 59
               + +  L      +E R++E  +        KL + YA +S II     + Q   + 
Sbjct: 1   MSQFEAVEGLIEEHEGLEKRLAEPETHADARLAKKLNQRYAELSSIIDAYRSWQQLGDDI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +    + G+  + +E  +           +    E  +  LL+P+D  DDK  ILE+++G
Sbjct: 61  EAARELAGEDPAFAEEAEAL-------VPQREAAEERLRRLLVPRDPTDDKDAILEVKSG 113

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGV 172
            GG E+ALF GDL RMY RYA  + WK+E L ++++D GGYK +   +        GR  
Sbjct: 114 EGGEESALFAGDLLRMYTRYAERQGWKLEFLDATESDLGGYKSVTVAVKAKGNPEPGRAP 173

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGS 232
           ++ +KFE GVHRVQRVP TE+ GRVHTSAA V V+PEA  +DV+I   D+RID  R+SG 
Sbjct: 174 YALLKFEGGVHRVQRVPVTESQGRVHTSAAGVLVVPEAEPVDVEINDNDLRIDVYRSSGP 233

Query: 233 GGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQ VNTTDSAVRITHIPTGI+V+  +EKSQ QN+ +AM+VLR+RL    +     E S 
Sbjct: 234 GGQSVNTTDSAVRITHIPTGIVVSMQNEKSQLQNKEQAMRVLRSRLLQAAQDAADAEASD 293

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            R+ Q+ + DRSERIRTYNF + RI+DHR     Y L+ VL G ++ +I   + A  A  
Sbjct: 294 ARRSQVRTVDRSERIRTYNFPENRISDHRTGYKSYNLDQVLDGDLEPVIGSAVDADLAAR 353

Query: 352 IGSA 355
           + S 
Sbjct: 354 LASL 357


>gi|16332286|ref|NP_443014.1| peptide chain release factor 1 [Synechocystis sp. PCC 6803]
 gi|2500139|sp|P74707|RF1_SYNY3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1653916|dbj|BAA18826.1| peptide chain release factor [Synechocystis sp. PCC 6803]
          Length = 365

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 144/355 (40%), Positives = 230/355 (64%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  + E+   +++     + D   ++ +  +++   +     + + +++ +   
Sbjct: 8   DKLASVEQTYQELTRMLADPDIATNPDELQRVAKARSSLEETVDTYETWKRSQEDLKGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  +D E+R++AQ+EV  +E  I ELE  +  LLLPKD +D+K+ +LEIRAGTGG 
Sbjct: 68  QIVKESGNDPEMREMAQLEVEELENAIGELEKRLTILLLPKDPNDEKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + WKV +LS S  D GG+KE +  + G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYTRYAESQGWKVSLLSESLADMGGFKEAILEVKGDRVYSQLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  +++V I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVKIDPKDIEMSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LYD+  +   +  S+NR+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMMLQEQNDAISSNRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+   R+TDHR+    + L   L+G I  II   ++  Q + +   +E
Sbjct: 308 SEKIRTYNYKDNRVTDHRLGRN-FDLNTALEGEIHTIIESCISQDQQERLAELAE 361


>gi|300789609|ref|YP_003769900.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32]
 gi|299799123|gb|ADJ49498.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32]
          Length = 356

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 153/362 (42%), Positives = 219/362 (60%), Gaps = 16/362 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +    +  L    AE+E ++++           KL   YA ++P++  +   D  + +  
Sbjct: 1   MDSSSLKGLLAEHAELETQLADPAVHADQARARKLGRRYAELTPVVRAVHDLDTVRDDLA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +       +        E   +   I +LE+ +  LLLP+D  D    ++EI++G 
Sbjct: 61  ATREM-------ASEDAEFAAEAEELAARIPDLESRLTELLLPRDPYDGSDVVMEIKSGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSR 175
           GG E+ALF GDL RMY RYA    WK EVL S D+D GG+K++  +I        GV+SR
Sbjct: 114 GGEESALFAGDLLRMYLRYAERHGWKAEVLDSVDSDLGGFKDVTLSIKSKAAAVDGVWSR 173

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           +KFE GVHRVQRVPATE+ GR+HTSA+ V + PE  E++V+I   D+RID  R+SG GGQ
Sbjct: 174 LKFEGGVHRVQRVPATESQGRIHTSASGVLIYPEPEEVEVEIDPNDLRIDVFRSSGPGGQ 233

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTGI+V   +EKSQ QNR RA++VL+ARL  V  +  A + S  R+
Sbjct: 234 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAVAEEEAAAKASDARR 293

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            Q+ + DRSER+RTYNF + RI+DHR+N   Y L+ VL G +D +++ L TA + + + +
Sbjct: 294 SQVRTVDRSERVRTYNFPENRISDHRVNYKAYNLDQVLDGDLDGVLDALATADREERLAA 353

Query: 355 AS 356
            S
Sbjct: 354 QS 355


>gi|317487895|ref|ZP_07946487.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA]
 gi|325830623|ref|ZP_08164044.1| peptide chain release factor 1 [Eggerthella sp. HGA1]
 gi|316913021|gb|EFV34538.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA]
 gi|325487369|gb|EGC89811.1| peptide chain release factor 1 [Eggerthella sp. HGA1]
          Length = 357

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 158/357 (44%), Positives = 224/357 (62%), Gaps = 12/357 (3%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +   + +++ +M +   +    +   L +EYA   P+  K   Y Q   +  +
Sbjct: 6   MREKLTKIIEAYEDVQAKMGDPAVLADQKEYNRLAKEYANQGPLAKKAREYVQAADDLAE 65

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D ++++ A  E+  IE ++  LE +I ++L+P D  DDK  I+EIRA  G
Sbjct: 66  AREMLA----DPDMKEFALEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAG 121

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F G+L++MYER+A+ + WK E +  S ++ GG+KEI   + G  V+S MKFESG
Sbjct: 122 GDEAAIFAGELYKMYERFASAQGWKTETMDMSASEAGGFKEIQFKVKGDHVYSVMKFESG 181

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPEA E++V+I   D+RID  RA G GGQ VNTTD
Sbjct: 182 VHRVQRVPKTESQGRIHTSTATVAVLPEADEVEVEINENDLRIDVYRAGGPGGQCVNTTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+P+G++V +  +KSQ QN++ AM VLRARLY+           A R  QIGSG
Sbjct: 242 SAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQAAEGAKRLAQIGSG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSE+IRTYN  Q R+TDHRI     Y    VL G  + D+I  L  A +A+ + +A
Sbjct: 302 DRSEKIRTYNGPQDRVTDHRIGFNGTYN--GVLLGDGLGDVITALQAADRAQKLEAA 356


>gi|65317305|ref|ZP_00390264.1| COG0216: Protein chain release factor A [Bacillus anthracis str.
           A2012]
          Length = 323

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 160/317 (50%), Positives = 223/317 (70%), Gaps = 2/317 (0%)

Query: 41  AISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYL 100
            I   +     Y   ++  +D   ++ D   D+E+R++ + EV  +E + + L   +  L
Sbjct: 8   DIQETVEVYREYKDVREXLKDAKAMLEDK-LDAEMREMVKEEVSELESQEKTLSERLKIL 66

Query: 101 LLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY 160
           L+PKD +DDK+ I+E+R   GG EAALF GDL+RMY RYA ++ WK E++ +S  + GGY
Sbjct: 67  LVPKDPNDDKNVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGY 126

Query: 161 KEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE 220
           KEI+  I+G+G F+++KFE+G HRVQRVP TE+ GR+HTS ATVAVLPEA E+++DI  +
Sbjct: 127 KEIIFMINGKGAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEK 186

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R+DT  +SG GGQ VNTT SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD
Sbjct: 187 DVRVDTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD 246

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
             R+    E   NRK  +G+GDRSERIRTYNF Q R+TDHRI LT+ KL+ +LQG +DD 
Sbjct: 247 KFRQEAQAEYDQNRKQAVGTGDRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDF 306

Query: 340 INPLLTAHQAKMIGSAS 356
           IN L+   QA+ + +A 
Sbjct: 307 INALVMEDQAQRMEAAE 323


>gi|325107093|ref|YP_004268161.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces
           brasiliensis DSM 5305]
 gi|324967361|gb|ADY58139.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces
           brasiliensis DSM 5305]
          Length = 358

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 144/358 (40%), Positives = 217/358 (60%), Gaps = 7/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
                 +     RF E+E +M++   +    K   + +EY  +  +   +  Y   + + 
Sbjct: 1   MFPS--LETKYQRFLELEKQMADPDVLSDPQKMLAIQKEYGGLKKVAHAVRDYHTLEADI 58

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +    ++ + +   +            ++  +  E  +  L    D+      I+EIRAG
Sbjct: 59  EAAEMMLEEEDDPDDREYAQSELDALEKRRDKMAEE-LEDLATAGDSITRGGLIMEIRAG 117

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  +L+ MY RY   R WK EV+     + GG KE+V ++SG G F  ++FE
Sbjct: 118 TGGDEAALFALNLYEMYSRYIETRGWKKEVMDFHPTEMGGVKEVVFSVSGEGAFHELQFE 177

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE  GR+HTSAATVAVLPEA E+++DI  ED+++DT RASG GGQ VN 
Sbjct: 178 SGGHRVQRVPETETQGRIHTSAATVAVLPEADEVEIDIKPEDLKVDTFRASGPGGQKVNK 237

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA+RITH+PTG +V    EKSQH+NR  AM+VLR+R+ + +++   +ER++ R+  IG
Sbjct: 238 TESAIRITHLPTGTVVTCQDEKSQHKNRASAMRVLRSRILENQQQAADSERASQRRTLIG 297

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRS RIRTYN+ QGR+TDHRI LTL+KL+ ++ G ++++++ LL   + + +    
Sbjct: 298 TGDRSSRIRTYNYPQGRVTDHRIGLTLHKLDQIMAGNLEELVSGLLEFDRQERLKGEG 355


>gi|307299656|ref|ZP_07579452.1| peptide chain release factor 1 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306914708|gb|EFN45098.1| peptide chain release factor 1 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 360

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 166/349 (47%), Positives = 230/349 (65%), Gaps = 7/349 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +   + RF E+E  +S+        KL    +++A +S II+  S  D  K E ++ H +
Sbjct: 7   MEVFRERFKEVEKELSKPEVASDPDKLMEYGKKHAELSEIINLYSEIDSMKGELEEWHEM 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 +   +++    +  +E  I   E  +  LL+P   D+ ++ I+EIRAGTGG EA
Sbjct: 67  KATAEENE--QEVIANTISDLENRIARKELNLKGLLVPDLADE-RNIIIEIRAGTGGEEA 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF  DLFRMY RYA    WK E++ S++ D GG+KE++  I GR VFS++K+ESGVHRV
Sbjct: 124 ALFAADLFRMYTRYAERNNWKSEIIDSNETDIGGFKEVIFQIRGRSVFSKLKYESGVHRV 183

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE+ GR+HTS ATVAVLPE +E +V I   D+RIDT R+SG+GGQHVN TDSAVR
Sbjct: 184 QRVPTTESGGRIHTSTATVAVLPEVSETEVKIDPADLRIDTYRSSGAGGQHVNKTDSAVR 243

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H PTGI+V    E+SQHQN+ RA+++LRARLY++   +  NE +  R+ QIG+G+RSE
Sbjct: 244 IVHEPTGIVVAVQKERSQHQNKARALEILRARLYEMYSSKAENEITEARRTQIGTGERSE 303

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +IRTYNF Q R+TDHRIN T Y+L YV+ G +D+++  L  A   K + 
Sbjct: 304 KIRTYNFPQNRVTDHRINFTSYRLLYVMDGDLDELVTELSAADINKRLE 352


>gi|282899982|ref|ZP_06307943.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195252|gb|EFA70188.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 364

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 140/354 (39%), Positives = 232/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F E+  R+++     S D Y K+ +  +++  ++     +   ++E     
Sbjct: 8   EKLKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVIAYETWKNSQEELVGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D E+ ++A +EV  +E +I  LE ++  LLLP+D +D+K+ +LEIRAGTGG 
Sbjct: 68  QILKESNGDPELHEMATMEVKDLENKIEHLEEQLKILLLPRDPNDEKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + W+V+++S S  + GG+KE++  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLLRMYSRYADTQGWRVKLVSESPGEMGGFKEVILEIQGDSVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GRVHTS ATVA++PE  +++V I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEAGGRVHTSTATVAIMPEVDDVEVHIDPKDIEMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QN+ RAM++LRA+LY+++ +      ++ R+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEAVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+      L  VL+G ++ +I   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDSRATDHRLGQNFT-LSPVLEGDLETLIQSCISQDQQERLAELA 360


>gi|40062641|gb|AAR37562.1| peptide chain release factor 1 [uncultured marine bacterium 313]
          Length = 358

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 174/356 (48%), Positives = 243/356 (68%), Gaps = 3/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  ++I  + N +  +E  ++ S      ++K ++EY+ I  II +   Y   ++E+ +
Sbjct: 1   MIPLEKIQQIVNTYKTLEKELASSDIGKKDFVKKSKEYSGIGEIIDEAKGYLDFEKEKLE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +I D  SD E+  L + E+  + K+ +  E  +   LLPKD  D K+ I+EIRAGTG
Sbjct: 61  LDKIIEDKKSDKEMIQLVKSELNELLKKKQSYEKILKVYLLPKDEADSKNAIVEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LFV DL++MYE+    +KW  E+++ S ++ GG+KE++  I G  ++S +KFESG
Sbjct: 121 GLEATLFVADLYKMYEKVCLNKKWSFEIINLSKSEAGGFKEVILLIKGANIYSFLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+DV I  +D+RID  R++G+GGQ VNTTD
Sbjct: 181 VHRVQRVPETETQGRVHTSAATVAVLPEAEEVDVKIEDKDLRIDVFRSTGAGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTGI+VT   EKSQH+NR + MK+LR+R+Y+ ER++   ERS +RK QIG+G
Sbjct: 241 SAVRITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRIYESEREKKEKERSRDRKNQIGTG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF QGR+TDHRINLT++KL+  L G   +++   L    Q   + + 
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTIHKLQEFLNGDAFEELGQNLRIQDQEIKLANL 356


>gi|303283714|ref|XP_003061148.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457499|gb|EEH54798.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 404

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 138/354 (38%), Positives = 222/354 (62%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++        E+  R+++         + KL++    ++ ++ + + Y +  +E Q+  
Sbjct: 47  DKLESSTQTHKELTFRLADPDVASNAKEFQKLSKALGELTSVVDQYARYKECIEELQEAK 106

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+ ++A+ E  A+ +E+  LE  +   LLP+D  D+K+ +LEIRAGTGG 
Sbjct: 107 AMVKDAAGDLEMGEMAREEATALNEEMDALEESMTMALLPRDPLDEKNIVLEIRAGTGGD 166

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA ++ GDL+RMY RYA  + WK  VL+++  D GGYKEIV  + G  V+S +K+E+GVH
Sbjct: 167 EAGIWAGDLWRMYSRYADSKGWKASVLTTNPADSGGYKEIVVELVGDSVYSELKWEAGVH 226

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+ TS ATVAV+PE  E++V I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 227 RVQRVPATESQGRIQTSTATVAVMPEVDEVEVKIDDKDIELTTARSGGAGGQNVNKVETA 286

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E++Q +NR+RAM++LR+RL++++ +  A E +  RK Q+GSG R
Sbjct: 287 VDLVHKPTGIRIFCTEERTQLKNRIRAMQILRSRLFELQMEEQAKEVAGRRKAQVGSGAR 346

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R++DHR+    + LE  + G +   I       Q + +   +
Sbjct: 347 SEKIRTYNYKDNRVSDHRVG-ENFPLEGFMNGDVSPAIGACQAMEQREKLEELN 399


>gi|307154812|ref|YP_003890196.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
 gi|306985040|gb|ADN16921.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
          Length = 370

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 232/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  + E+  R+++     + D   ++ +  +++   ++    + + K+E     
Sbjct: 8   EKLKSVELTYRELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTKEELAGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++A +EV  +E+++  LE+ +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QILKESAGDLELREMAALEVQELEQQLETLESRLKVLLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  ++W V+++S S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYAESQRWAVKLVSESLADMGGFKEAILEIQGDSVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  E++V I  +D+ I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDLEISTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +      S+ R+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+      +   L+G ID+II   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLGQNFSLVGA-LEGDIDEIIQSCISRDQQEQLAELA 360


>gi|295105808|emb|CBL03351.1| bacterial peptide chain release factor 1 (bRF-1) [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 357

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 162/356 (45%), Positives = 223/356 (62%), Gaps = 12/356 (3%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQD 61
             +++  +   + +++ RM +   +    +   L +EYA+  P+  K   Y Q   +   
Sbjct: 6   MREKLEKIIQAYEDLQGRMGDPAVLADQKEYNRLAKEYASQGPLAKKAREYVQASDDLAA 65

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++     D ++R+ AQ E+  IE ++  LE +I ++L+P D  DDK  I+EIRA  G
Sbjct: 66  AKEMMA----DPDMREFAQEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAG 121

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDL++MYER+A  + WK E +  S ++ GG+KEI   + G  V+S MKFESG
Sbjct: 122 GDEAAIFAGDLYKMYERFAGAQGWKTETMDVSASEAGGFKEIQFKVKGDHVYSVMKFESG 181

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS ATVAVLPEA E++VDI   D+RID  RA G GGQ VNTTD
Sbjct: 182 VHRVQRVPKTESQGRIHTSTATVAVLPEADEVEVDINENDLRIDVYRAGGPGGQCVNTTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+P+G++V +  +KSQ QN++ AM VLRARLY+           A R  QIGSG
Sbjct: 242 SAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQAAEGAERLAQIGSG 301

Query: 301 DRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGY-IDDIINPLLTAHQAKMIGS 354
           DRSE+IRTYN  Q R+TDHRI     Y    VL G  + D+I  L  A +A+ + +
Sbjct: 302 DRSEKIRTYNGPQDRVTDHRIGYNGTYN--GVLLGDGLGDVITALQAADRAQKLEA 355


>gi|94676864|ref|YP_588739.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|119361509|sp|Q1LTH5|RF1_BAUCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94220014|gb|ABF14173.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 366

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 149/362 (41%), Positives = 224/362 (61%), Gaps = 5/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R+ E+E  +  S       +L   ++EYA ++ I +    + Q ++
Sbjct: 1   MKPSIITKLKVLQERYYEVETLLGNSEVAKDRERLRILSKEYAQLTDIHTCFQHWQQVQE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  ++ D      ++D        +    ++L   +      KD +D++ C +E+R
Sbjct: 61  NISITGPMLEDPEMHDMVQDELNKLHSLLSTLEQQLLTLLLQKDSNKDPNDERGCFIEVR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF GDLFRMY RYA +  W+++V+S+S    GGYKEI+  +S    + ++K
Sbjct: 121 AGTGGDEAALFAGDLFRMYSRYAEIHSWQIDVISASSGPHGGYKEIIVKMSHDNAYGQLK 180

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQR+P TE+ GR+HTS+ TVAV+P+    +  +I  EDIR+DT R+SG+GGQH
Sbjct: 181 FESGGHRVQRIPETESQGRIHTSSCTVAVIPDILHAELPEISPEDIRVDTFRSSGAGGQH 240

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTT+SA+RITH+PTG++V    E+SQH+N+ +AM VL ARL   E +    E S  R+ 
Sbjct: 241 VNTTESAIRITHLPTGLVVECQDERSQHKNKAKAMAVLSARLRAAEAQCRQQEESCMRRN 300

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +GSG RS+RIRTYNF QGRITDHRI  T Y+L  V++G ++ ++ P++  +Q   + + 
Sbjct: 301 LLGSGYRSDRIRTYNFPQGRITDHRIGFTTYRLNEVIEGKLEILLQPIIQEYQTNQLIAL 360

Query: 356 SE 357
           SE
Sbjct: 361 SE 362


>gi|282889838|ref|ZP_06298377.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500412|gb|EFB42692.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 354

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 151/354 (42%), Positives = 234/354 (66%), Gaps = 6/354 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              +I  L ++  ++E  +           Y  LT+E+A +S + S      +  ++ +D
Sbjct: 1   MEAKITKLLSKLPDLEEALGNPEVFQDQKRYRALTQEHAYLSELKSVWEKMVKSNKQIED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D  + +E++++ + +   +   + +L+ ++  LL+P D +D ++ I+E+RAGTG
Sbjct: 61  NQEMLADEAN-AELKEVLEEDTRNLRSLVEKLQVDLENLLVPPDPNDHRNTIVELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY+ YA  + W+ E+LS + ++ GG+KE V  +SG+ V+  + +E G
Sbjct: 120 GDEAALFVGDCVRMYKLYADSKGWRYELLSCTPSEMGGFKEYVMVLSGQNVYRFLHYEGG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HRVQRVP TEA GRVHTSA TVA+L     + +V I  +D+R+DT R+SG+GGQHVNTT
Sbjct: 180 THRVQRVPETEAQGRVHTSAMTVAILLEPDEDTEVVIDEKDLRVDTYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+TH PTGI+V    E+SQH+N+ +AM++L+A++ + E+++   E ++NR  Q+GS
Sbjct: 240 DSAVRLTHNPTGIVVYCQEERSQHKNKEKAMRLLKAKIVEAEQRKKQEEIASNRSQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           GDRSERIRTYNF Q RITDHRINLT Y L+ V++G +D+I   L+T    + + 
Sbjct: 300 GDRSERIRTYNFPQNRITDHRINLTRYNLDRVMEGDLDEITLALVTHFHQEKLK 353


>gi|291460253|ref|ZP_06599643.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291417200|gb|EFE90919.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 360

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 154/359 (42%), Positives = 241/359 (67%), Gaps = 5/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
               + + +++  + E+ L ++       +  Y KL  E + + P+      + + ++ E
Sbjct: 1   MRMFENLEEVRRHYEELMLSLTRPELSNDIARYRKLIREQSELEPLYKTYLAFRKAEESE 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   ++     D E+ ++A+ E+   ++E   L  ++  LLLPKD +DDK+ ++EIR G
Sbjct: 61  RDALELLQ-KEKDPELLEMAKEELQNAKEEQSLLGEKLRLLLLPKDENDDKNIVMEIRGG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF  +L+RMY  YA  R ++ E++S  +   GG KE++  + G+G +SR+K+E
Sbjct: 120 AGGEEAALFAAELYRMYMSYAERRGFRTELVSFHETGLGGLKEVIFIVDGQGAYSRLKYE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTS ATVAV+PEA E++V+I   D+R++  R+SG+GGQH+N 
Sbjct: 180 SGVHRVQRVPETESGGRIHTSTATVAVMPEAGEVEVEIKPSDVRMEVFRSSGAGGQHINK 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+ HIP+G++     E+SQ QNR +AM++LRARLY++E ++   E +A ++ Q+G
Sbjct: 240 TSSAVRLIHIPSGMVAECQEERSQLQNREKAMRLLRARLYEIESRKRHEESAAEKRSQLG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +G+RSE+IRTYNF QGR+TDHRI L+LY LE +L G +D +I+PL+TA QA+ +    E
Sbjct: 300 TGERSEKIRTYNFPQGRVTDHRIKLSLYCLEEILGGDLDPLIDPLITAEQAEKLSRMEE 358


>gi|291276374|ref|YP_003516146.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
 gi|290963568|emb|CBG39400.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
          Length = 352

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 173/355 (48%), Positives = 238/355 (67%), Gaps = 8/355 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  +  R  EI   + +      + A   L++E + I  I  +   Y       +
Sbjct: 1   MLISKLLPIIKRHDEITALLVDPAITSDIKALTNLSKEQSEIQEITQQTKAYMATLDTIR 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  +I +   D  +  +A+ E+  + +  + LE  I  LL+PKD +D K+  LE+RAGT
Sbjct: 61  DLEDLILE---DKALAGMAKEELEVLRERAKNLEESIKTLLIPKDPNDGKNIYLELRAGT 117

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA +FVGDLFR Y RYA L+KWKVE++SSS+N+ GGYKEI+A I G GV+SR+KFES
Sbjct: 118 GGDEAGIFVGDLFRAYCRYADLKKWKVEIISSSENNVGGYKEIIALIKGEGVYSRLKFES 177

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVPATE+ GR+HTSA TVA++PE  E++V +   D+RI+  RA G GGQ VNTT
Sbjct: 178 GTHRVQRVPATESQGRIHTSAITVALMPEVDEVEVVLNPSDLRIEVFRAGGHGGQCVNTT 237

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI V+   EKSQH+N+ +A+K+LR+R+YD + ++   + +  RK Q+GS
Sbjct: 238 DSAVRITHIPTGINVSIQDEKSQHKNKEKALKILRSRIYDAQMEQQQVQNAQTRKNQVGS 297

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIG 353
           GDRSERIRTYN+ Q R+TDHRI LTLY LE V+  G +D II+PL    ++  + 
Sbjct: 298 GDRSERIRTYNYPQNRLTDHRIGLTLYSLEEVMLSGNLDPIIDPLTAHARSVELE 352


>gi|298491428|ref|YP_003721605.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
 gi|298233346|gb|ADI64482.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
          Length = 364

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 235/353 (66%), Gaps = 5/353 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F E+  R+++     + D Y K+ +  +++  +++    +   ++E     
Sbjct: 8   EKLQSVEQTFHELTRRLADPDTAKNPDEYQKIAKSRSSLEEVVNTYETWKIAQEELVGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V+ + NSD E++++A +EV  +E+++  LE+ +  LLLP D +DDK+ +LEIRAGTGG 
Sbjct: 68  QVLKESNSDPELQEMAALEVKELEEKLEYLESRLKVLLLPCDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + WKV+++S S  + GG+KE++  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLLRMYSRYADTQGWKVKLVSQSLGEMGGFKEVILEIQGDRVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GRVHTS AT+A++PE  ++++ I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATESGGRVHTSTATIAIMPEVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
             + H PTGI +  + E+SQ QN+ RAM++LRA+LY+++ +      ++ R+ Q+G+G R
Sbjct: 248 ADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEAVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SE+IRTYN+   R+TDHR+      L  VL+G ++ I+   ++ +Q + +   
Sbjct: 308 SEKIRTYNYKDSRVTDHRLGNNFT-LNPVLEGDLETIVQSCISQYQQERLAEL 359


>gi|308177036|ref|YP_003916442.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117]
 gi|307744499|emb|CBT75471.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117]
          Length = 357

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 143/362 (39%), Positives = 211/362 (58%), Gaps = 18/362 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  L    A I+ ++S+           KL    A ++ I+   + +     + +   
Sbjct: 3   ESVKSLLEEHAAIQAQLSDPAVYADQALARKLGRRSAQLNGIVEAYNKWQTATDDLEAAQ 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +    +E             +E+ +LE ++  LL+P+D +D ++ ILE++ G GG 
Sbjct: 63  EMADEDPDFAEEVQAL-------TEELPQLEEKLRRLLIPRDENDGRNVILEVKGGEGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           EAALF  DL RMY R+A  + WKVE++S +++D GGYK+    I         GV++++K
Sbjct: 116 EAALFAADLLRMYTRFAEHKGWKVEMISFNESDLGGYKDAQVAIKGNSNDPAEGVYAQLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FE GVHRVQRVP TE+ GR+HTSAA V VLPE  E +  DI   D++ID  R+SG GGQ 
Sbjct: 176 FEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEEVDIHQNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR  AM+VLR+RL   +++ +  E SA R  
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQIQNREAAMRVLRSRLLAHQQEIIDKENSAQRAS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + DRSERIRTYN+ + RI DHR     Y L+ V+ G +  ++   +   + + + + 
Sbjct: 296 QIRTMDRSERIRTYNYPENRIADHRTGYKAYNLDAVMDGDLQPVVESCIQMDEEERLAAL 355

Query: 356 SE 357
            E
Sbjct: 356 GE 357


>gi|24212814|ref|NP_710295.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45656013|ref|YP_000099.1| peptide chain release factor 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|32171561|sp|Q8F9S6|RF1_LEPIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59798055|sp|Q72W38|RF1_LEPIC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24193465|gb|AAN47313.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45599246|gb|AAS68736.1| peptide chain release factor 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 354

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 148/351 (42%), Positives = 219/351 (62%), Gaps = 2/351 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
              ++  ++ ++  I   ++++    +   L +E + ++P+  K+  Y +  ++ +D   
Sbjct: 1   MIDRLEKIQEKYLRISEELNQAKDPSSLKNLYKERSRLTPLYLKVEEYLKIYKDRKDAEE 60

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I     D E+  + + E+     ++  LE E   LLLP D +  K+ ++EIRAGTGG E
Sbjct: 61  LIQ-SEKDEEMHSMLKEEIREANLKLETLEREFEILLLPPDPNSGKNILVEIRAGTGGEE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LFV DLFRMY ++A  +K K E++ SS    GG KEI+  +     +   KFE G HR
Sbjct: 120 AGLFVADLFRMYSKFADKQKIKTEIIDSSPTGIGGLKEIIFALEDDRAYDLFKFEGGTHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P+TE+ GR+HTSA TVAVLPEA E +V I   D+RID  R+SG+GGQHVNTTDSAV
Sbjct: 180 VQRIPSTESGGRIHTSAVTVAVLPEADEEEVQINESDLRIDVYRSSGAGGQHVNTTDSAV 239

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTG++V    EKSQH+N+ +A+++L AR+ + + +       A +K  IGSGDRS
Sbjct: 240 RITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQAEDKKQASDAIKKQMIGSGDRS 299

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ER+RTYNF QGR TDHRI  T + L  +++G +D++I  L    + + I  
Sbjct: 300 ERVRTYNFPQGRCTDHRIGFTSHNLSAIMEGDLDELIGALTEEDRVRKISE 350


>gi|220906439|ref|YP_002481750.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
 gi|254790876|sp|B8HXV0|RF1_CYAP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219863050|gb|ACL43389.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
          Length = 364

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 140/354 (39%), Positives = 230/354 (64%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  F E+  R+++       + + ++ +  A++   +     +   +Q   +  
Sbjct: 8   DKLKSVELTFHELTRRLADPEVATDPEEFQRVAKARASLEETVDTYDTWKTVQQHLAEAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +  SD E++++A  EV  + ++   LE  +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QIAREAASDPELQEMAVQEVNELTEKSAHLEQRLKILLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL R+Y RYA  ++W+V+++S S  + GG+KE +  I G  V+S++K+E+GVH
Sbjct: 128 EASIWAGDLVRLYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKLKYEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEASGRVHTS ATVA++PE  E++V I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEASGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QN+ RAM++LRA+LY+++ +   +E ++ R+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLQEQQSEITSRRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+    + L  VL+G I+ II   +T  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRATDHRLG-QNFPLNQVLEGDIEGIIQACITQDQQEQLAELA 360


>gi|86609051|ref|YP_477813.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|119361626|sp|Q2JL68|RF1_SYNJB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86557593|gb|ABD02550.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 360

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 145/354 (40%), Positives = 226/354 (63%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEE---YAAISPIISKISIYDQKKQEEQDLH 63
            Q+ +++  F E+ +R+++        +L       +++   +     + +  ++ Q   
Sbjct: 8   DQLKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQAFHDWQKLNRDLQQTE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+  +A+ E+  +     +LE ++  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  ELLRESASDPELEAMARAELEQLRARQEQLEEKLTLLLLPRDPNDDKNIMLEIRAGTGGE 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAAL+  DL RMY RYA    W V + S S+ + GGYKE +  I G  V+S++KFE+GVH
Sbjct: 128 EAALWAADLARMYTRYAEKLGWSVRLASLSEGELGGYKEAILEIQGDQVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVAV+PE  E++V I  +DI I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAQGRVHTSTATVAVMPEVDEVEVVIDPKDIEIKTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +      S+ R++Q+G+G R
Sbjct: 248 VDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQASISSARRMQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+N   + L+ +L G +DD+I   +  +Q +++   S
Sbjct: 308 SEKIRTYNYKDNRVTDHRLN-QNFPLQPILDGELDDLIQACIGLYQKELLAELS 360


>gi|256827314|ref|YP_003151273.1| peptide chain release factor 1 [Cryptobacterium curtum DSM 15641]
 gi|256583457|gb|ACU94591.1| bacterial peptide chain release factor 1 (bRF-1) [Cryptobacterium
           curtum DSM 15641]
          Length = 357

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 170/362 (46%), Positives = 236/362 (65%), Gaps = 15/362 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
            L  +++  +   + +++ RMS+   +    +   L +EYA   P+ +    Y Q   + 
Sbjct: 1   MLEKEKLEKIIEAYRDLQTRMSDPAVISDQKEYNRLAKEYAHQGPLATAARTYVQDIDDL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   +I    SD+++R+ AQ E+  IE E+  LE++I ++L+P D  DDK  I+EIRAG
Sbjct: 61  AEAKEMI----SDADMREFAQEEITRIENELPGLEDDIKFMLIPADPADDKDIIVEIRAG 116

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF GDLF+MY  +A ++ WK+EVL++S ++ GGYKEI   + G  V+S MKFE
Sbjct: 117 AGGDEAALFAGDLFKMYSHFADVKGWKIEVLNASASEAGGYKEIQFKVKGDKVYSEMKFE 176

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTS ATVAVLPEA E++VD+  ED+RID  RA G GGQ VNT
Sbjct: 177 SGVHRVQRVPKTESQGRIHTSTATVAVLPEADEVEVDVKQEDLRIDVYRAGGPGGQCVNT 236

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V +  +KSQ QN++ AM VLRARLY+   +       A R+ QIG
Sbjct: 237 TDSAVRITHLPTGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLEEQRAAEGAERRAQIG 296

Query: 299 SGDRSERIRTYNFSQGRITDHRINLT-LYKLEYVL--QG--YIDDIINPLLTAHQAKMIG 353
           +GDRSE+IRTYN  Q R+TDHRI     Y    +L   G   ++D+I  L  A +A+ + 
Sbjct: 297 TGDRSEKIRTYNGPQDRVTDHRIGYNGTYN--GILMNAGGAGLEDLITALQAADRAQKLE 354

Query: 354 SA 355
            A
Sbjct: 355 QA 356


>gi|320449105|ref|YP_004203663.1| peptide chain release factor 1 [Thermus scotoductus SA-01]
 gi|320151737|gb|ADW23114.1| peptide chain release factor 1 [Thermus scotoductus SA-01]
          Length = 354

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 148/338 (43%), Positives = 215/338 (63%), Gaps = 8/338 (2%)

Query: 24  SESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQ 80
           ++   +     Y  L+  YA +  +I+ I  Y +  ++ + +  ++     D E++++A+
Sbjct: 20  ADPEVLKDQKRYQALSRRYAEMGEVIALIREYRKVLEDLEGVEGLLE----DPELKEVAR 75

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
            E  A+     +LE  +   LLPKD  D++  I+EIRAGTGG EAALF  DL  MY R+A
Sbjct: 76  AEKEALLSRKADLEKALERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFA 135

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++ E+L S   D GG+ ++V  + G G +   K+ESGVHRVQRVPATE  GR+HTS
Sbjct: 136 EEMGFETEILDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTS 195

Query: 201 AATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            ATVAVLP+A E D  + +++IRID MRASG GGQ VNTTDSAVR+ H+PTGIMV     
Sbjct: 196 TATVAVLPKAEESDFQLNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDS 255

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQ +NR +A+ +LR+RL +++R   A +    R  QIG+G+RSE+IRTYNF Q R+TDH
Sbjct: 256 RSQIKNREKALMILRSRLLEMKRAEEAEKLRKTRLAQIGTGERSEKIRTYNFPQSRVTDH 315

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RI  T + LE +L G++  ++  L  A Q + + + +E
Sbjct: 316 RIGFTTHDLEGILSGHLQPLLEALKRADQERQLEALTE 353


>gi|271963194|ref|YP_003337390.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021]
 gi|270506369|gb|ACZ84647.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021]
          Length = 350

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 217/353 (61%), Gaps = 14/353 (3%)

Query: 9   ICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + +L + +AE+EL++++                YA ++PII+     +  + +      +
Sbjct: 3   LDELLSEYAELELKLADPTVHAHPAQARTFGRRYAELTPIITTYRELEGVQNDLDTAREL 62

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +  + +E            E  + ELE+++ +LL+P+D +DDK  I+EI+AG GG E+
Sbjct: 63  ASEDEAFAEEAKEL-------EGRVPELEDKLRHLLIPRDPNDDKDIIMEIKAGEGGEES 115

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS---GRGVFSRMKFESGV 182
           ALF GDL RMY RYA    WK E++ ++ +D GGYK++   +      GV+SR+KFE GV
Sbjct: 116 ALFAGDLLRMYLRYAERVGWKTELIDATHSDLGGYKDVTVALKARGDEGVWSRLKFEGGV 175

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+HTSAA V V PEA E+DV +   D+RID  R+SG GGQ VNTTDS
Sbjct: 176 HRVQRVPVTESQGRIHTSAAGVLVYPEAEEVDVQVDPNDLRIDVYRSSGPGGQSVNTTDS 235

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTG++    +EKSQ QN+  AM++LRARL  +  +       A RK QI + D
Sbjct: 236 AVRITHIPTGVVASCQNEKSQLQNKESAMRILRARLQAIAEEEANAAAMAERKSQIRTVD 295

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RSERIRTYNF + RI+DHR+    Y L+ VL G +  +I  LL A  A+ + +
Sbjct: 296 RSERIRTYNFPENRISDHRVGFKAYNLDQVLDGDLTAVIQSLLDAEMAEKLAA 348


>gi|332712139|ref|ZP_08432067.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L]
 gi|332348945|gb|EGJ28557.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L]
          Length = 370

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 137/354 (38%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  + E+  R+++       +   ++ +  A++  +++    + + +++     
Sbjct: 8   EKLNSVEQTYHELTRRLADPDIATDPNELQRVAKARASLEEVVATYDNWKKTQEDLAGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   + E++++A +EV  ++ ++  LE E+  LLLPKD +D+K+ +LEIRAGTGG 
Sbjct: 68  QILKESTGEPEMQEMAALEVEELQTKVEHLERELKILLLPKDPNDEKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RY+  + W+V++LS S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYSESQNWRVKLLSESLADMGGFKEAILEIQGEQVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVAV+PE  E+DV+I  ++I I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAVMPEVDEVDVEIDPKEIEISTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +      ++ R+ Q+G+G R
Sbjct: 248 VDLYHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEIKLQEQQEAVTSMRRAQVGTGAR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+    Y L  +L+G ++ +I   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLG-QNYSLAPLLEGDLEGLIQACISQDQQEQLEKLA 360


>gi|297182635|gb|ADI18793.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF4000_37C10]
          Length = 358

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 173/356 (48%), Positives = 244/356 (68%), Gaps = 3/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  +++  + + +  +E  ++    +   +   ++ Y++I  +I++   Y   K+E+ +
Sbjct: 1   MIPLEKVQQIVSTYETLEKELASGDINKKDFANKSKGYSSIREVINQARSYLSFKKEQAE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +I D  SD +I +LA+ E++ + K+  E E  +   LLPKD  D K+ ILEIRAGTG
Sbjct: 61  LEKIIEDKKSDKDIIELAKNELIQLSKKREENEKILKVYLLPKDEADSKNAILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LFV DL++MYER    +KW  E+++ S ++ GG+KE++  I G  ++S +KFESG
Sbjct: 121 GLEATLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSFLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA EIDV+I  +D+RID  R+SG GGQ VNTTD
Sbjct: 181 VHRVQRVPETETQGRVHTSAATVAVLPEAEEIDVNINEKDLRIDVFRSSGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+V+  + KSQH+NR +AMK+LR+R+YD ER++   +RS +RK QIGSG
Sbjct: 241 SAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRKNQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF Q R+TDHRINLT++KL+  L G   ++    L    Q   + + 
Sbjct: 301 DRSERIRTYNFPQSRVTDHRINLTIHKLQEFLNGDAFEEFGRNLRIQDQEIKLANL 356


>gi|320528629|ref|ZP_08029782.1| peptide chain release factor 1 [Solobacterium moorei F0204]
 gi|320130995|gb|EFW23572.1| peptide chain release factor 1 [Solobacterium moorei F0204]
          Length = 358

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 142/351 (40%), Positives = 224/351 (63%), Gaps = 6/351 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +++ ++ EI  ++ +   +       KL++E A ++  +       +          
Sbjct: 7   KLSEIEKQYKEIVEKLMDEKVMSDPKLLTKLSKEQARLTQPVEAYHQLLELDSRIAQADE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +  +D E++++A++E    E E   L   I +LL+P+D DDD   I+EIR G GG E
Sbjct: 67  MLKE--NDPELKEMARMEKDECEPEREVLLERIQHLLVPRDPDDDHDVIMEIRGGAGGDE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
             +F GDL+RMY +YA  + WKV+VL +S ++ GGY +I+ ++ G  V+  +KFESGVHR
Sbjct: 125 GNIFAGDLYRMYSKYAESKGWKVQVLEASVSEAGGYTQIIFSVKGTDVYKELKFESGVHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GR+HTS ATV   PEA + D++I  +D+ I+T RASG+GGQH+N TDSAV
Sbjct: 185 VQRVPKTETQGRIHTSTATVLCQPEAEDTDIEIDPKDLTIETHRASGAGGQHINKTDSAV 244

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RI H+PTGI V     +SQ +NR  AM+++RAR+Y+  ++    E    R+ +IG+GDRS
Sbjct: 245 RIVHVPTGITVNCQDGRSQIENRETAMRLIRARVYEELKRIQEEEAGKIRRAKIGTGDRS 304

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           E+IRTYN+ Q R+TDHRI+LT+ +L+ +++G +D +I  LL   + + +  
Sbjct: 305 EKIRTYNYPQNRVTDHRISLTITQLDRIMEGKLDGVIEGLLAEEEKRKLEE 355


>gi|186684480|ref|YP_001867676.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
 gi|238691196|sp|B2ITM5|RF1_NOSP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|186466932|gb|ACC82733.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
          Length = 365

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 139/354 (39%), Positives = 231/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  F E+  R+ +     + D Y ++ +  +++  +++   I+   +++     
Sbjct: 8   DKLKSVEQTFNELTRRLGDPDTASNPDEYQEIAKSRSSLEEVVNTYEIWKTAQEDLIGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V  +  SD E++++A +EV  +E++I  LE+ +  LLLP+D +D+K+ +LEIRAGTGG 
Sbjct: 68  EVYKESASDPELQEMASLEVKELEEKIEHLESRLKVLLLPRDPNDEKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL +MY RYA  + WKV ++S S  + GG+KE++  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLMQMYTRYAQTQGWKVSLVSESRGEMGGWKEVILEIKGNDVYSQLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GRVHTS ATVA++PE  ++++ I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATESGGRVHTSTATVAIMPEVDDVEIHIDPKDIEMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QN+ RAM++LRA+LYD++        ++ R+ Q+G+G R
Sbjct: 248 VDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYDIKLGEQQAAVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+    Y L  VL G ++ +I   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRATDHRLG-QNYSLTPVLDGDLETLIQSCISLDQQERLAELA 360


>gi|119961991|ref|YP_948327.1| peptide chain release factor 1 [Arthrobacter aurescens TC1]
 gi|119948850|gb|ABM07761.1| peptide chain release factor 1 [Arthrobacter aurescens TC1]
          Length = 359

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 149/366 (40%), Positives = 208/366 (56%), Gaps = 18/366 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
               + +  L +  A I+ ++S+           KL    A +  I+   + +     + 
Sbjct: 1   MKMFESVQGLLDEHAAIQAQLSDPAVYADQSAARKLGRRSAQLQGIVEAYNKWRGLNDDL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +    +  +   D E           I      L      LL+P+D DD ++ ILE++ G
Sbjct: 61  EAAKEMADE---DPEFAAEVVQLEEQIPAAQERL----RRLLIPRDPDDARNVILEVKGG 113

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVF 173
            GG EAALF GDL RMY RYA  R WK E++S++++D GGYK++   I        +GVF
Sbjct: 114 EGGDEAALFAGDLLRMYMRYAESRGWKTEMISATESDLGGYKDVAVAIKGNSNDPAQGVF 173

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGS 232
           +R+KFE GVHRVQRVP TE+ GR+HTSAA V VLPE  E +  +I   D++ID  R+SG 
Sbjct: 174 ARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGP 233

Query: 233 GGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQ VNTTDSAVRITH+PTGI+V   +EKSQ QNR   M+VLRARL   +++++    S 
Sbjct: 234 GGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARLLAHQQEQIDAANSE 293

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            RK QI + DRSERIRTYNF + RI DHR     Y L+ V+ G ++ +I   + A +   
Sbjct: 294 QRKSQIRTMDRSERIRTYNFPENRIADHRTGYKAYNLDAVMNGDLEPVIQSAIEADEQAR 353

Query: 352 IGSASE 357
           + +  E
Sbjct: 354 LDAIGE 359


>gi|291298828|ref|YP_003510106.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568048|gb|ADD41013.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM
           44728]
          Length = 367

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 154/361 (42%), Positives = 222/361 (61%), Gaps = 18/361 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L    +E+E ++++           ++   YA +SPI +  +  D  K++      
Sbjct: 9   RLAVLLAEHSELEKQLADPSIHADAALARRVGRRYAELSPIAACNAELDTVKEDLAAAEE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           + GD             E  A+ + I +LE ++  LLLP+D DD +  I+EI+AG GG+E
Sbjct: 69  LAGDDPE-------FAAEATALRERIPQLEEKLAELLLPRDPDDSRDVIIEIKAGEGGAE 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVFSRMK 177
           +ALF  DL RMY RYA    W  E++ S +++ GG K++   +          GV+SRMK
Sbjct: 122 SALFAADLLRMYLRYAEKHGWVAEIMDSQESEMGGVKDVSVAVKTKGNPEGGHGVWSRMK 181

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FE GVHRVQRVP TE+ GR+HTSAA V V+PEA E+DV+I + ++RID  R+SG GGQ V
Sbjct: 182 FEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEEVDVEINMHELRIDVYRSSGPGGQSV 241

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITHIPTG++    +EKSQ QN+  AM++LRARL   +++       A RK Q
Sbjct: 242 NTTDSAVRITHIPTGVVASCQNEKSQLQNKEAAMRILRARLLAAKQEEAEAAAGAARKSQ 301

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSER+RTYNF Q R+TDHRI  T + L+ V+QG +D +++ L TA +A  +  + 
Sbjct: 302 VRTVDRSERVRTYNFPQNRVTDHRIGYTSHNLDQVMQGDMDGVLDALATAERAARLEGSD 361

Query: 357 E 357
           E
Sbjct: 362 E 362


>gi|46446286|ref|YP_007651.1| peptide chain release factor 1 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|61214629|sp|Q6MDH3|RF1_PARUW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46399927|emb|CAF23376.1| probable translation releasing factor RF-1 [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 359

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 157/359 (43%), Positives = 241/359 (67%), Gaps = 6/359 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  K++ +L  R AE+E  +           Y  LT+E+A ++ +          +++ +
Sbjct: 1   MMEKKVHELLERLAEVEEVLGNPHVYDDQKKYRALTQEHAYLNNLKKSWDEKKDLEKQLE 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++     D E  ++ + ++  ++  ++EL+  I  LL+P D  D++  I+E+RAGT
Sbjct: 61  DNQELLKIEK-DLEFAEVLKDDIRQLQSRVQELQLLIENLLVPPDPLDNRPSIIELRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALFVGD  RMY+ +A  + W+ E+LS + ++ GG+KE V  +SG  V+  M++E+
Sbjct: 120 GGDEAALFVGDCVRMYKLFADRKGWRYELLSCTPSEMGGFKEYVMVLSGENVYRFMQYEA 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           G HRVQRVPATEA GRVHTSA T+AVLPE  E +  D+  +D+RIDT R+SG+GGQHVNT
Sbjct: 180 GTHRVQRVPATEAQGRVHTSAITIAVLPEPDENEEIDLDEKDLRIDTYRSSGAGGQHVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+P+GI+V    E+SQH+N+ +AM++L+A++ ++E+++   E ++ R  Q+G
Sbjct: 240 TDSAVRITHVPSGIVVYCQEERSQHKNKDKAMRLLKAKMAEIEQQKKQQELASTRAQQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRSERIRTYNF Q RITDHRINLT Y L+YV+ G +++I + L+     + + ++ E
Sbjct: 300 SGDRSERIRTYNFPQNRITDHRINLTKYNLDYVINGDLEEITSALVAYFHQEKLKTSRE 358


>gi|302759937|ref|XP_002963391.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
 gi|300168659|gb|EFJ35262.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
          Length = 412

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 131/353 (37%), Positives = 221/353 (62%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +++++    +    + KL +  A +  +++    Y + ++E  DL  
Sbjct: 58  KLDSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQE 117

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I   + D E+ ++A  E   +++ I  LE  +  LLLP D  D ++ +LE+RAGTGG E
Sbjct: 118 MIK-SSGDKELAEMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDE 176

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMY++YA   +W    +S ++ + GG+KE V  I+G  V+S++K+ESGVHR
Sbjct: 177 AGIWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHR 236

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVA++PE  E++V I  +DI + T R+ G+GGQ+VN  ++AV
Sbjct: 237 VQRVPATESQGRVHTSTATVAIMPEVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 296

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E++Q +N+ RA ++LRA+LY+++      + S+ R+ Q+G+G RS
Sbjct: 297 DLFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQEKISSQRRSQVGTGARS 356

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R++DHR  +  + L+  L G I+  +       Q +M+   +
Sbjct: 357 EKIRTYNYKDNRVSDHRTKIN-FDLDSFLSGNIESAVQACAAVEQKQMLEELA 408


>gi|295707229|ref|YP_003600304.1| peptide chain release factor 1 [Bacillus megaterium DSM 319]
 gi|294804888|gb|ADF41954.1| peptide chain release factor 1 [Bacillus megaterium DSM 319]
          Length = 325

 Score =  252 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 226/325 (69%), Gaps = 2/325 (0%)

Query: 33  IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRE 92
            + ++E + I   ++    Y   K++  +  T++ D   D+++RD+ + E+  +E +  E
Sbjct: 2   REYSKEQSDIQQTVAAYQEYKDVKEQLSEAKTMLEDK-LDADMRDMVKEEIAELETQQEE 60

Query: 93  LENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSS 152
           L  ++  LL+PKD +DDK+ I+E+R   GG EAALF  +L+RMY R+A  + WK EV+ +
Sbjct: 61  LVEKLRILLIPKDPNDDKNVIMEVRGAAGGDEAALFAANLYRMYSRFAESQGWKTEVMEA 120

Query: 153 SDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE 212
           +    GGYKEI+  I+G+G +S+MKFE+G HRVQRVP TE+ GR+HTS ATVA LPEA E
Sbjct: 121 TTTGVGGYKEIIFMINGKGAYSKMKFENGAHRVQRVPETESGGRIHTSTATVACLPEAEE 180

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           ++VDI  +DIR+DT  +SG GGQ VNTT SAVR+TH+PT  +V    EKSQ +N+ +AMK
Sbjct: 181 VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPTNTVVSCQDEKSQIKNKEKAMK 240

Query: 272 VLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYV 331
           VLRAR+YD  ++    E  A RK  +GSGDRSERIRTYNF Q R+TDHRI LT+ KL+ +
Sbjct: 241 VLRARVYDKFQREAQAEYDATRKQAVGSGDRSERIRTYNFPQNRVTDHRIGLTIQKLDQI 300

Query: 332 LQGYIDDIINPLLTAHQAKMIGSAS 356
           L+G +D+II+ L+   QA+ +  ++
Sbjct: 301 LEGKLDEIIDALVMEDQARRMEDSN 325


>gi|302785810|ref|XP_002974676.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
 gi|300157571|gb|EFJ24196.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
          Length = 412

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 131/353 (37%), Positives = 221/353 (62%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +++++    +    + KL +  A +  +++    Y + ++E  DL  
Sbjct: 58  KLDSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQE 117

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I   + D E+ ++A  E   +++ I  LE  +  LLLP D  D ++ +LE+RAGTGG E
Sbjct: 118 MIK-SSGDKELAEMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDE 176

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMY++YA   +W    +S ++ + GG+KE V  I+G  V+S++K+ESGVHR
Sbjct: 177 AGIWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHR 236

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVA++PE  E++V I  +DI + T R+ G+GGQ+VN  ++AV
Sbjct: 237 VQRVPATESQGRVHTSTATVAIMPEVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 296

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E++Q +N+ RA ++LRA+LY+++      + S+ R+ Q+G+G RS
Sbjct: 297 DLFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQEKISSQRRSQVGTGARS 356

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R++DHR  +  + L+  L G I+  +       Q +M+   +
Sbjct: 357 EKIRTYNYKDNRVSDHRTKIN-FDLDSFLSGNIESAVQACAAMEQKQMLEELA 408


>gi|170077656|ref|YP_001734294.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
 gi|238689045|sp|B1XJH8|RF1_SYNP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169885325|gb|ACA99038.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
          Length = 363

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 143/354 (40%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  F E+  R+++     + D   ++ +  +++   ++  + + + ++E +   
Sbjct: 8   DKLKSVEQTFQEMTRRLADPDIATNPDELQRVAKIRSSLEETVNTFNQWKEAQEELRGAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E++++A +EV  +E  I  LEN +  LLLPKD +D+K+ +LEIRAGTGG 
Sbjct: 68  EILKESAGDPEMKEMAALEVEELENTIDTLENRLKILLLPKDPNDEKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + W+V++LS S  D GG+K ++  I G  V+S++K+E+GVH
Sbjct: 128 EASIWAGDLLRMYSRYAEGQNWRVKLLSESAADMGGFKAVILEIQGEQVYSKLKYEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS AT+AV+PE  +++V+I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATIAVMPEVDDVEVEIDPKDIEMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY++E +R   E S+ RK Q+G+G R
Sbjct: 248 VDLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQQEEVSSMRKSQVGTGAR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+      L   L+G I+D++   ++  Q   +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLGQNFS-LAPALEGDIEDMLQACISQDQQAQLEQLA 360


>gi|293399752|ref|ZP_06643898.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306152|gb|EFE47395.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 358

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 140/360 (38%), Positives = 223/360 (61%), Gaps = 6/360 (1%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           + +  +++  + NR+ EI   M +   V       KL  E A ++ ++     Y    + 
Sbjct: 1   MSIMIERLEGMVNRYHEITELMMQPDIVSDSRELAKLGREQADLTQVVETYQDYKHSMEA 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            +           D EI+++A++E+  +E +I E   ++  LL+PKD +D  + I+EIR 
Sbjct: 61  LE--EAKELLKEEDKEIKEMAKMEIEELEPKIEEYLGKLEILLIPKDPNDSHNAIVEIRG 118

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
             GG E  +F GDL+RMY +YA  + WK+E++   D++ GG+  +   + G GV+ ++KF
Sbjct: 119 AAGGDEGNIFAGDLYRMYSKYAESQGWKIEIVEMDDSEAGGFSLVSFMVKGDGVYGKLKF 178

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           ESG HRVQRVP TE+ GR+HTS ATV V PE    D DI + D+ I+TMR+SG+GGQH+N
Sbjct: 179 ESGSHRVQRVPKTESQGRIHTSTATVLVTPEIEAEDFDIDMNDLEIETMRSSGAGGQHIN 238

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRI H PTGI V     +SQH+NR  A+  +R+R+Y+  ++++  E+   R+ +I
Sbjct: 239 KTDSAVRIVHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGMERRSKI 298

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           G+GDR+E+IRTYN+ Q R+TDHRI  T+ +L+ +++G + D+++ L +A Q   +   +E
Sbjct: 299 GTGDRAEKIRTYNYPQNRVTDHRIGYTVNQLDRIMEGKMQDLLDALTSADQQAKLAGNNE 358


>gi|239617233|ref|YP_002940555.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
 gi|239506064|gb|ACR79551.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
          Length = 361

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 174/359 (48%), Positives = 237/359 (66%), Gaps = 7/359 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
               K I   K +  E+E ++S+S  V    K   L++ +A +  I     +   KKQE 
Sbjct: 1   MNLEKLIELFKKQLEEVEAKLSDSSIVGNPSKLMELSKRHAELKEISRSYDLLASKKQEL 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           Q+   +    +   E R+ A+  +  ++KEI ++E  + +LL+P +    K  I+EIRAG
Sbjct: 61  QEWEEIKELLS--PEEREEAEKNIAELQKEIEQIELNLKFLLIPDEL-GGKDIIVEIRAG 117

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF GDLFRMY RYA    WKVE L S++ D GG+KE+   I G+ VF ++K+E
Sbjct: 118 TGGEEAALFAGDLFRMYTRYAERNSWKVETLESNETDLGGFKEVTFQIKGKDVFRKLKYE 177

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+ GR+HTS ATVAVLP+A+E+DV I   ++RIDT R+SG+GGQHVN 
Sbjct: 178 SGVHRVQRVPQTESGGRIHTSTATVAVLPKASEVDVAIDPSELRIDTFRSSGAGGQHVNR 237

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRI H+PTGI VT  SE+SQHQN+ RAM++LRARLY + R +  +  S  R+ QIG
Sbjct: 238 TESAVRIVHLPTGITVTVQSERSQHQNKARAMEILRARLYSLYRSQQESTLSQQRRSQIG 297

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +G+RSE+IRTYNF Q R+TDHRIN T Y+L+ +L G +D++I  L  A     +    E
Sbjct: 298 TGERSEKIRTYNFPQNRVTDHRINYTTYRLQDILDGDLDELIAKLAEADINIKLEKLLE 356


>gi|242089427|ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
 gi|241945831|gb|EES18976.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
          Length = 416

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 167/356 (46%), Positives = 242/356 (67%), Gaps = 3/356 (0%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +  +++  ++ R A ++ ++++   S + Y +  +E+  +   +  I     K++E + L
Sbjct: 60  IMEQRMKLIEQRSAYLQEQINQPAASPEEYSRANKEFRKLESTMELIKELRSKREEIEGL 119

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            +++ +   + ++R++A  E+L   +  + L++E+   LLPKD  D++ CILE+RAGTGG
Sbjct: 120 KSLVTNAREEKDMREMAAEELLEAVEVEKRLQHELFRSLLPKDEADERDCILEVRAGTGG 179

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF  D+FRMYE+YA    WK +V+   ++   GYKE   TISG G F ++KFESG+
Sbjct: 180 EEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGI 239

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE SGRVHTSA +VAVLP+A E+DV +  ED+RIDT R+ GSGGQ VNTTDS
Sbjct: 240 HRVQRVPVTEKSGRVHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDS 299

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTG +V    E+SQH N+ +A+KVLRARLY++ER R+  +RS  R  QIGSGD
Sbjct: 300 AVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERHRLHMDRSKLRSEQIGSGD 359

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHR+ +T + +  V++G  +D  ++ LL   +   I S  
Sbjct: 360 RSERIRTYNFPQGRVTDHRVGITHHSIADVMEGESLDVFVDALLLQEEMDAIASFG 415


>gi|218440653|ref|YP_002378982.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
 gi|226739098|sp|B7KI17|RF1_CYAP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218173381|gb|ACK72114.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
          Length = 370

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 232/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  + E+  R+++     + D   ++ +  +++   ++    + + K+E     
Sbjct: 8   EKLKSVEQTYKELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTKEEITGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   DSE+R++A +EV  +E+++ +LEN++  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QILKEAGGDSEMREMAALEVEELEEQLEQLENKLKVLLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + W V+++S S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEIKGDQVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  E++V I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDIEVSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +      S+ R+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+      +   L+G I+ II   +   Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLGQNFSLVGA-LEGDIEVIIQSCIGKDQQERLAELA 360


>gi|257785108|ref|YP_003180325.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469]
 gi|257473615|gb|ACV51734.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469]
          Length = 355

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 160/357 (44%), Positives = 232/357 (64%), Gaps = 9/357 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  + + +AE+E ++++   V     Y ++ +E++  + +++  + Y     + + 
Sbjct: 1   MRDKLEKIVDAYAELEQKLADPAVVSDPKEYARVAKEHSNQADLVAHANKYITALDDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    SD E +++ Q ++ A E+ + +LE+EI  +L+P D +D+K  I+EIRAG G
Sbjct: 61  AKELLN-ATSDPEEKEMLQEDIAANEEMLPQLEDEIKVMLIPGDPNDEKDTIVEIRAGVG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDLF+MYER+A  R WK E+LSSS ++ GG+K I   ++G  V+S MK+ESG
Sbjct: 120 GDEAAIFAGDLFKMYERFAEARGWKTEILSSSPSEAGGFKTIEFKVTGDKVYSVMKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+ TS ATVAVLPEA EID+ I  ED+RIDT  ASG GGQ VNTT 
Sbjct: 180 VHRVQRVPKTESQGRIQTSTATVAVLPEADEIDIQINQEDLRIDTYCASGPGGQCVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY++E +R   E+ A R  QIG G
Sbjct: 240 SAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELERQQAEQGAERLSQIGHG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
            RSE+IRTYN  Q R+TDHR+     Y    VL G  +  +I  L  A +A+ +  A
Sbjct: 300 ARSEKIRTYNQPQDRVTDHRVGFNGTYN--GVLLGDTLPSVIEALAAAERAEKLAQA 354


>gi|239944287|ref|ZP_04696224.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
 gi|239990742|ref|ZP_04711406.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           11379]
 gi|291447755|ref|ZP_06587145.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
 gi|291350702|gb|EFE77606.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
          Length = 358

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 150/363 (41%), Positives = 220/363 (60%), Gaps = 21/363 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L     ++E ++++           KL + YA ++PI+S    + Q   + +   
Sbjct: 3   EAVEELIGEHTDLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRAWKQTGDDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D             EV  +EK+  E+  ++  LL+P+D  DDK  +LEI+AG GG 
Sbjct: 63  EFAADDPD-------FAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +RMK+E GVHRVQRVP+TE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG G
Sbjct: 176 ARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEEVDVEIHANDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +AM++LR+RL    ++    E S  
Sbjct: 236 GQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDV 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   + A  A  +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGELDAVIQACVDADSAAKL 355

Query: 353 GSA 355
            +A
Sbjct: 356 ANA 358


>gi|115352205|ref|YP_774044.1| peptide chain release factor 2 [Burkholderia ambifaria AMMD]
 gi|115282193|gb|ABI87710.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           ambifaria AMMD]
          Length = 406

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L  E   +  +++ ++  D   ++  DL  + 
Sbjct: 69  DAKSARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELA 128

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        +   +      K++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 129 REEGD-----EDTLVASEDDAKKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 183

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     ++G   +  ++ E+G+HR+ 
Sbjct: 184 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLV 243

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V++   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 244 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTDSAVR 303

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RLY+ E ++   E+    + K  +G G  
Sbjct: 304 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWG-- 361

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +     VL G +DD I+  L  
Sbjct: 362 -HQIRSYVLDQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 404


>gi|189025285|ref|YP_001933057.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|238689313|sp|B2S1Z9|RF1_TREPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189017860|gb|ACD70478.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059466|gb|ADD72201.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 351

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 168/349 (48%), Positives = 243/349 (69%), Gaps = 5/349 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ +L+ ++ +++  +       +   Y +   ++A +S ++ +   Y   +++ +D
Sbjct: 1   MIEKLEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSRLMEEYDRYLLTEKQLED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            H +I D  SD++ +D+ + E+  +E  +   +  +  LL+P D   +K+ I+EIR GTG
Sbjct: 61  AHVLIQDE-SDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDPLQEKNIIMEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  ++W+ EVL+ S+ + GG+KEI  +ISGR V+  +++ESG
Sbjct: 120 GDEAALFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP+TEASGR+HTSA TVAVLPE  E +VDI  ED+R+D MRASG GGQ VNTTD
Sbjct: 180 VHRVQRVPSTEASGRIHTSAVTVAVLPEMEETEVDIRAEDVRVDVMRASGPGGQCVNTTD 239

Query: 242 SAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI +V   EKSQ +N+ +AM+VLR+R+YD+E  +    R+  RK Q+GSG
Sbjct: 240 SAVRLTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQVARARERKSQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           DRSERIRTYNF Q R+TDHR+ +TLYKL+ V+QG +DDII PL  A + 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRVRVTLYKLDAVMQGALDDIIEPLCIASRE 348


>gi|308805082|ref|XP_003079853.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116058310|emb|CAL53499.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1134

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 161/347 (46%), Positives = 233/347 (67%), Gaps = 5/347 (1%)

Query: 14  NRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
            R  E+   +S   + +D  I+  +E A + P++ + S+    + E + L  +    + +
Sbjct: 553 KRHDELIALISAPDAAIDRVIEANKELARLDPLVKQYSMVKSLRDERESLDELAR-TSDE 611

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            +I +LA+ E+ AI+ ++ E E+ +  +LLP+D  DD+  ILE+RAG GG EAALF  +L
Sbjct: 612 KDITELAREELRAIDAKLPEQEHALRIMLLPRDDADDRGAILEVRAGAGGDEAALFAAEL 671

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
           FRMY  +A    W+ E L+ S+ D  G +E  A + G GVF R+KFESGVHRVQRVP TE
Sbjct: 672 FRMYALHARKSGWRFETLNMSETDGKGIREGSAEVLGDGVFGRLKFESGVHRVQRVPETE 731

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
             GRVHTS A+VAVLP AAE+D+DI  ED+RI+TMRASG+GGQHVNTT+SAVR+TH+PTG
Sbjct: 732 TQGRVHTSTASVAVLPHAAEVDMDIRDEDVRIETMRASGAGGQHVNTTNSAVRLTHLPTG 791

Query: 253 IMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           I V    E+SQH+N+ +A  VL++RLYD+ER+++ANER+  R   IG+GDRSE++RTYNF
Sbjct: 792 ITVAIQDERSQHKNKAKAFSVLKSRLYDMEREKLANERAELRSSLIGTGDRSEKVRTYNF 851

Query: 312 SQGRITDHRI-NLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
            QGR+ DHR+       ++  + G+ +DD+++ L      + +   S
Sbjct: 852 PQGRVKDHRVDGNVSGDIKGFMDGFLLDDLVDKLREKEIEEKLDRLS 898


>gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [Streptomyces sp. AA4]
 gi|302438695|gb|EFL10511.1| peptide chain release factor 1 [Streptomyces sp. AA4]
          Length = 356

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 149/362 (41%), Positives = 221/362 (61%), Gaps = 16/362 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +    +  L +  A +E  +++           KL   YA +SP++  +   DQ + +  
Sbjct: 1   MDSSSLKGLLDEHARLEQELADPAVHADQARARKLGRRYAELSPVVRAVRELDQARDDLS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +  +  + +   D           +I +LE ++  LLLP+D  D    ++EI++G 
Sbjct: 61  AAKELSAEDATFAAEADEL-------TAKIPQLEAKLTELLLPRDPYDGSDVVMEIKSGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSR 175
           GG E+ALF GDL RMY RYA    WK EVL S+++D GGYK++  ++  +      V++R
Sbjct: 114 GGEESALFAGDLLRMYLRYAERHNWKAEVLDSTESDLGGYKDVTLSLKSKTADVEGVWAR 173

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           +KFE GVHRVQRVPATE+ GR+HTSA+ V + PE  E++V+I   D+RID  R+SG GGQ
Sbjct: 174 LKFEGGVHRVQRVPATESQGRIHTSASGVLIYPEPEEVEVEIDPNDLRIDVFRSSGPGGQ 233

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTGI+V   +EKSQ QNR RA++VL+ARL  +  +  A + S  R+
Sbjct: 234 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAIAEEEAAAKASDARR 293

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            Q+ + DRSER+RTYNF + RI+DHR+N   Y L+ VL G +D +++ L  A + + + +
Sbjct: 294 SQVRTVDRSERVRTYNFPENRISDHRVNYKAYNLDQVLDGELDGVLDALAAADREERLAA 353

Query: 355 AS 356
            S
Sbjct: 354 QS 355


>gi|302842492|ref|XP_002952789.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
           nagariensis]
 gi|300261829|gb|EFJ46039.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
           nagariensis]
          Length = 415

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 139/358 (38%), Positives = 231/358 (64%), Gaps = 6/358 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++   +  F E++++M++         + K+ +  A +   ++    Y   +++  D
Sbjct: 54  MVEKLSAAEMTFKELQMKMADPEVAANSTEFQKVAKAAADLEETVNAYRTYKDTEKQLSD 113

Query: 62  LHT-VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +  +   D E+ + A+ E+  +E  + +L++++   L+PKD  DD++ +LEIRAG 
Sbjct: 114 ASEYLKNEAADDPEMAEFARAEIAELEVSLAQLQDKLRLQLVPKDPLDDRNIMLEIRAGA 173

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+++ GD+ RMY+RYA  + WK  ++S +  + GGYKE++  ISG  V+S++K+E+
Sbjct: 174 GGDEASIWAGDMMRMYQRYANRQGWKASLVSCTQGESGGYKEVILEISGTSVYSKLKWEA 233

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEA+GRVHTS ATVAV+PE  ++DV I   +I +   RASG+GGQ+VN  
Sbjct: 234 GVHRVQRVPATEAAGRVHTSTATVAVMPEVEDVDVQINPSEIEVKFARASGAGGQNVNKV 293

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AV + H PTGI +    E++Q QN+ RA ++LRA+LY++E +R   E  A RK Q+G+
Sbjct: 294 ETAVDLMHKPTGIRVFCQEERTQAQNKERAFQILRAKLYEMEIQRQQAEIYAARKSQVGT 353

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSE+I+TYN+   R++DHRI    + L  VL+G ++D +  +++A Q + +   +E
Sbjct: 354 GDRSEKIKTYNYKDSRVSDHRIK-QNFDLNSVLEGDLEDSLQAMISADQQEKLKMLAE 410


>gi|254412235|ref|ZP_05026010.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181201|gb|EDX76190.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC
           7420]
          Length = 371

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 137/354 (38%), Positives = 231/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  F E+  R+++           ++ +  +++  ++    ++   ++E     
Sbjct: 8   DKLQSVEQTFHELTRRLADPDIATDPVEVQRVAKARSSLEEVVITYELWKTAQEELTGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + N D E+ ++A +EV  ++ ++ ELE  +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QILKEANGDGEMHEMASLEVEELQTKLEELEKRLKILLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  + W+V++LS S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYAETQNWRVKLLSESPADMGGFKEAILEIQGEQVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVAV+PE  ++++++  +D+ + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAVMPEVDDVEIEVDPKDLEVSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RA+++LRA+LY+++ +      ++ R+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTEERSQLQNRERALQILRAKLYEMKLREQQEAVTSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR++   Y L  +L+G I+ +I   +T  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLS-QNYSLNSLLEGDIESVIQACITQDQQERLEELA 360


>gi|15618037|ref|NP_224321.1| peptide chain release factor 1 [Chlamydophila pneumoniae CWL029]
 gi|15835649|ref|NP_300173.1| peptide chain release factor 1 [Chlamydophila pneumoniae J138]
 gi|16752931|ref|NP_445202.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39]
 gi|33241449|ref|NP_876390.1| peptide chain release factor 1 [Chlamydophila pneumoniae TW-183]
 gi|6225941|sp|Q9Z968|RF1_CHLPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4376376|gb|AAD18266.1| Peptide Chain Releasing Factor [Chlamydophila pneumoniae CWL029]
 gi|7189573|gb|AAF38472.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39]
 gi|8978487|dbj|BAA98324.1| peptide chain releasing factor [Chlamydophila pneumoniae J138]
 gi|33235957|gb|AAP98047.1| translation releasing factor RF-1 [Chlamydophila pneumoniae TW-183]
 gi|269302994|gb|ACZ33094.1| peptide chain release factor 1 [Chlamydophila pneumoniae LPCoLN]
          Length = 357

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 164/355 (46%), Positives = 234/355 (65%), Gaps = 7/355 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             K++ +  NR AE+E+++S          Y  L++E++ +  + +        ++   D
Sbjct: 1   MKKKVAEYLNRLAEVEIKISNPEIFSNSKEYSALSKEHSYLLELKNAYDKILNLEKVLAD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
               +     D E+  + +  +   + E+ +L   +  LL+P D DDD + I+E+RAGTG
Sbjct: 61  DKQALAIEK-DPEMVVMLEEGINENKVELEKLNKILESLLVPPDPDDDLNVIMELRAGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALFVGD  RMY  YA+ + WK EVLS+S++D  GYKE V  ISG GV   +++E+G
Sbjct: 120 GEEAALFVGDCVRMYHLYASSKGWKYEVLSASESDLKGYKEYVMGISGTGVKRLLQYEAG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
            HRVQRVP TE  GRVHTSA T+AVLPE +E D +  I  +D++IDT RASG+GGQHVN 
Sbjct: 180 THRVQRVPETETQGRVHTSAITIAVLPEPSEEDTELLINEKDLKIDTFRASGAGGQHVNV 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQH+N+ +AM++L+AR+ D E ++  NE SA R  Q+G
Sbjct: 240 TDSAVRITHLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRHNEASAMRSAQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           SGDRSERIRTYNFSQ R+TDHRI LTLY L+ V++G +D I   +++    +++ 
Sbjct: 300 SGDRSERIRTYNFSQNRVTDHRIGLTLYNLDKVMEGDLDPITTAMVSHAYHQLLE 354


>gi|320102129|ref|YP_004177720.1| peptide chain release factor 1 (bRF-1) [Isosphaera pallida ATCC
           43644]
 gi|319749411|gb|ADV61171.1| bacterial peptide chain release factor 1 (bRF-1) [Isosphaera
           pallida ATCC 43644]
          Length = 364

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 136/350 (38%), Positives = 207/350 (59%), Gaps = 4/350 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           ++I     R+ E+   ++    V+       L  E +A++ +    + Y +  +   ++ 
Sbjct: 3   EKIKADYRRYEELNRELASPDLVNDPGRLAALMRERSALAKLAVPYARYLELTRRRAEVQ 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            VI   +                + E    E     +       D    I+EIRAGTGG 
Sbjct: 63  QVIETESDPEMKEYAQAEFDQLAQAEAESAEYLKTLIYEQATGSDHAGVIVEIRAGTGGD 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DL+ MY R+   + W+ E L  +  + GG++E    + G G +  ++FESG H
Sbjct: 123 EAALFARDLYEMYRRFVERQGWRFEPLEIAPTELGGFREASFGVRGEGAYRHLQFESGGH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GR+HTSAATVAVLPE  E+++++  ED++ID MRA G GGQH N T+S 
Sbjct: 183 RVQRVPVTETQGRIHTSAATVAVLPEPEEVEIELRDEDLQIDVMRAGGPGGQHQNKTESG 242

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+P+GI+V    E+SQH+N+ +A+++LR+RLY+ +R    ++RS  R+  IGSGDR
Sbjct: 243 VRITHLPSGIVVNCRDERSQHKNKAKALRILRSRLYEAQRNAAQSQRSQTRRSLIGSGDR 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           S+RIRTYNF Q R+TDHRINLTL++L+ ++ G ++ +  PL+   + + +
Sbjct: 303 SQRIRTYNFPQNRVTDHRINLTLHQLDRIVAGELELVTRPLIEHDRREQL 352


>gi|88807914|ref|ZP_01123425.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
 gi|88787953|gb|EAR19109.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
          Length = 365

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 224/354 (63%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   ++ F  +E ++++        +L     E + + P+++  +     + E +    
Sbjct: 9   RLEAARDSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYTSLQSVQAEREQARE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D E+ +LAQ+E+  ++K    L   +   LLPKD  D++S +LEIRAG GG E
Sbjct: 69  LLRDSRGDEEMANLAQLELEELDKRHEVLIQRLTLALLPKDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYER+++ R W V+ +S+S+ D GG+KE++ ++ G  VFS +KFE+GVHR
Sbjct: 129 ACLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGDSVFSELKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H P+GI +  + E+SQ QNR RAM++LRA+LY+ +        S+ R+ Q+G+GDRS
Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAEANARESSARRAQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN    R+TDHR+      L+ VLQG ++D+I   +   Q   + + S+
Sbjct: 309 EKIRTYNAKDNRVTDHRLGRNFS-LDPVLQGQMEDVIGACIAEEQRSKLAALSQ 361


>gi|111018484|ref|YP_701456.1| peptide chain release factor 1 [Rhodococcus jostii RHA1]
 gi|119361595|sp|Q0SGN8|RF1_RHOSR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110818014|gb|ABG93298.1| peptide chain release factor RF1 [Rhodococcus jostii RHA1]
          Length = 359

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 147/356 (41%), Positives = 212/356 (59%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+    A +E ++++        A  K  + +A ++PI++  +     + +      +
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPIMATYAKLKSAQDDLDAAREL 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D +S          EV  +E ++ EL+  +  LL P+D  D    +LE+++G GG E+
Sbjct: 70  AADDSS-------FAAEVPELEAQVLELDKALTDLLAPRDPHDGDDVVLEVKSGEGGEES 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-----GRGVFSRMKFES 180
           ALF  DL RMY RYA    W+VE+L ++ +D GGYK+   +I        GV++R+KFE 
Sbjct: 123 ALFASDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEG 182

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V + PE  E++   I   D+RID  R+SG GGQ VNT
Sbjct: 183 GVHRVQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNT 242

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL     +    E SA R+ Q+ 
Sbjct: 243 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVR 302

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + RITDHRI    + L+ VL G +D +++ L  + +   + +
Sbjct: 303 TVDRSERIRTYNFPENRITDHRIGFKSHNLDAVLDGELDALLDALGKSDREARLAA 358


>gi|15639045|ref|NP_218491.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|6093956|sp|O83090|RF1_TREPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3322309|gb|AAC65047.1| peptide chain release factor 1 (prfA) [Treponema pallidum subsp.
           pallidum str. Nichols]
          Length = 351

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 168/349 (48%), Positives = 244/349 (69%), Gaps = 5/349 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             +++ +L+ ++ +++  +       +   Y +   ++A +S ++ +   Y   +++ +D
Sbjct: 1   MIEKLEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSRLMEEYDRYLLTEKQLED 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            H +I D  SD++ +D+ + E+  +E  +   +  +  LL+P D+  +K+ I+EIR GTG
Sbjct: 61  AHVLIQDE-SDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDSLQEKNIIMEIRGGTG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DLFRMY  YA  ++W+ EVL+ S+ + GG+KEI  +ISGR V+  +++ESG
Sbjct: 120 GDEAALFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP+TEASGR+HTSA TVAVLPE  E +VDI  ED+R+D MRASG GGQ VNTTD
Sbjct: 180 VHRVQRVPSTEASGRIHTSAVTVAVLPEMEETEVDIRAEDVRVDVMRASGPGGQCVNTTD 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+V    EKSQ +N+ +AM+VLR+R+YD+E  +    R+  RK Q+GSG
Sbjct: 240 SAVRLTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQVARARERKSQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           DRSERIRTYNF Q R+TDHR+ +TLYKL+ V+QG +DDII PL  A + 
Sbjct: 300 DRSERIRTYNFPQNRVTDHRVRVTLYKLDAVMQGALDDIIEPLCIASRE 348


>gi|167041273|gb|ABZ06029.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_005D21]
 gi|167045778|gb|ABZ10424.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           bacterium HF4000_APKG3108]
          Length = 358

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 241/356 (67%), Gaps = 3/356 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  +++  + + +  +E  ++    +   +   ++ Y++I  +I++   Y   ++E+ +
Sbjct: 1   MIPLEKVKQIVSTYETLEKELASGDINKKDFANKSKGYSSIREVINQARSYLGFEKEKVE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +I D  SD ++ +LA+ E++ + K+  E E  +   LLP D  D K+ ILEIRAGTG
Sbjct: 61  LEKIIEDKKSDKDMIELAKNELIQLSKKKEENEKILKVYLLPNDEADSKNAILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LFV DL++MYER    +KW  E+++ S ++ GG+KE++  I G  ++S +KFESG
Sbjct: 121 GLEATLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSFLKFESG 180

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTSAATVAVLPEA E+DV I  +D+RID  R+SG GGQ VNTTD
Sbjct: 181 VHRVQRVPETETQGRVHTSAATVAVLPEAEEVDVKINEKDLRIDVFRSSGPGGQSVNTTD 240

Query: 242 SAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI V+  + KSQH+NR +AMK+LR+R+YD ER++   +RS +RK QIGSG
Sbjct: 241 SAVRITHLPTGIAVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRKNQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF Q R+TDHRINLT++KL+  L G   ++    L    Q   + + 
Sbjct: 301 DRSERIRTYNFPQSRVTDHRINLTIHKLQEFLNGDAFEEFGQNLRIQDQEIKLANL 356


>gi|297559304|ref|YP_003678278.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843752|gb|ADH65772.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 356

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 149/359 (41%), Positives = 220/359 (61%), Gaps = 18/359 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ DL   + E+E ++++        +   L + YA ++PII       + + +      
Sbjct: 2   KLDDLLGEYYELEQQLADPEVHADQARARTLGKRYAQLTPIIETYRALKEVESDIDTARE 61

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + +S +E  D        + +E   L   +  LL+P+D  DDK+ I+E++AG GG E
Sbjct: 62  LAAEDSSFAEEAD-------RLTEEAERLTERLRVLLIPRDPADDKNLIMEVKAGEGGEE 114

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-------VFSRMK 177
           +ALF GDL RMY RYA  + WK EV+ S+ +D GGYK+I      +G       V+  +K
Sbjct: 115 SALFAGDLVRMYLRYAERQGWKTEVIDSTHSDLGGYKDITIAFKNKGTPEPGSGVWPMLK 174

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FE GVHRVQRVP TE+ GR+HTSAA V V+PEA +I+V+I  +D+R+D  R+SG GGQ V
Sbjct: 175 FEGGVHRVQRVPVTESQGRIHTSAAGVLVVPEAEDIEVEIHEKDLRVDVYRSSGPGGQSV 234

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+    +EKSQ QN+ +AM++LRAR+Y   +     E +A RK Q
Sbjct: 235 NTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRARIYAEAQASADAEAAAERKSQ 294

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           + + DRSER+RTYNF + RI+DHR+    Y L+ VL G +  ++  L+ A   + + +A
Sbjct: 295 VRTVDRSERVRTYNFPENRISDHRVGYKAYNLDQVLDGELGGVVKALVDADTKERLEAA 353


>gi|119484803|ref|ZP_01619285.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
 gi|119457621|gb|EAW38745.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
          Length = 368

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 145/354 (40%), Positives = 233/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLH 63
           +++   +  F E+ LR+++    +   +L    +E ++I  +++   ++   ++E     
Sbjct: 8   EKLRSFEQTFNELTLRLADPDVSNNPTELQRIAKERSSIEEVVNTYQLWKTAQEELTGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            V  +   D E++++A +EV  ++ ++ +LE  +  LLLP D +DDK+ +LEIRAGTGG 
Sbjct: 68  QVQKEAGEDPEMKEMAALEVEELQNQLEQLETHLKVLLLPSDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  +KW+V+++S S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYAEGQKWQVKIVSESSADMGGFKEAILEIKGDQVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVAV+PE  E+DV+I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPLTEAGGRVHTSTATVAVMPEVDEVDVEIDPKDIEMSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +      ++ R+ Q+G+G R
Sbjct: 248 VDLIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVTSMRRSQVGTGAR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+      L  VL+G +DD+++  +   Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLGQNFS-LSPVLEGGMDDVVDACVFTDQQERLLELA 360


>gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614]
 gi|166223579|sp|A1SHH9|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp.
           JS614]
          Length = 357

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 149/362 (41%), Positives = 211/362 (58%), Gaps = 18/362 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  +    A++E R+    +        +L + YAA+S II       Q   + +   
Sbjct: 3   EAVEGMLAEHADLEQRLGAPETHADARLAKQLNQRYAALSSIIGAYRELQQLDDDIEAAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +  + +E           +       E  +  LL+P+D  DDK  ILE+++G GG 
Sbjct: 63  ELAQEDPAFAEEAAALTGRRQEV-------EERLRRLLVPRDAADDKDAILEVKSGEGGE 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRM 176
           E+ALF GDL RMY RYA  R WKVEVL ++++D GGYK +   +        G   ++ +
Sbjct: 116 ESALFAGDLLRMYTRYAEARGWKVEVLDAAESDLGGYKSVTVAVKAKGTPEPGEAPYALL 175

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           KFE GVHRVQRVP TE+ GRVHTSAA V VLPEA ++DV I   D+RID  R+SG GGQ 
Sbjct: 176 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVLPEAEQVDVQIDENDLRIDVFRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR +AM++LR+RL    +++   E    R+ 
Sbjct: 236 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRSRLLAAAQEKADAEAGEARRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+ + DRSERIRTYNF + RI+DHR     Y L+ VL G +  +++  + A  A  + + 
Sbjct: 296 QVRTVDRSERIRTYNFPENRISDHRTGYKAYNLDQVLDGDLQPVLDSCVEADLAARLEAL 355

Query: 356 SE 357
            +
Sbjct: 356 EQ 357


>gi|182435969|ref|YP_001823688.1| peptide chain release factor 1 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776593|ref|ZP_08235858.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1]
 gi|238689014|sp|B1W0B6|RF1_STRGG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|178464485|dbj|BAG19005.1| putative peptide chain release factor 1 [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326656926|gb|EGE41772.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1]
          Length = 358

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 150/363 (41%), Positives = 220/363 (60%), Gaps = 21/363 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L      +E ++++           KL + YA ++PI+S    + Q  ++ +   
Sbjct: 3   EAVEELIGEHTGLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRAWKQTGEDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D             EV  +EK+  E+  ++  LL+P+D  DDK  +LEI+AG GG 
Sbjct: 63  EFAADDPD-------FAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +RMK+E GVHRVQRVP+TE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG G
Sbjct: 176 ARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEEVDVEIHANDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +AM++LR+RL    ++    E S  
Sbjct: 236 GQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDV 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   + A  A  +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGELDAVIQACVDADSAAKL 355

Query: 353 GSA 355
            +A
Sbjct: 356 ANA 358


>gi|322379189|ref|ZP_08053581.1| peptide chain release factor 1 [Helicobacter suis HS1]
 gi|322379995|ref|ZP_08054263.1| peptide chain release factor 1 [Helicobacter suis HS5]
 gi|321147584|gb|EFX42216.1| peptide chain release factor 1 [Helicobacter suis HS5]
 gi|321148391|gb|EFX42899.1| peptide chain release factor 1 [Helicobacter suis HS1]
          Length = 352

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 171/356 (48%), Positives = 251/356 (70%), Gaps = 10/356 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEE 59
            LS  ++ ++  R+  + L +++   ++      +L++E A++  +      Y +   + 
Sbjct: 1   MLSQ-KLKEVVARYDALALCLTQPEVLNDVKRLTELSKEQASLEELAQAAKRYLKILDQI 59

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           Q+   ++     D E+ +LA+ E+ ++E++ + L + I  LL+PKD +D K+  LE+RAG
Sbjct: 60  QENKALLE----DKELGELAKEELKSLEEQSKNLGDHIKILLIPKDPNDSKNIYLELRAG 115

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA +FVGDLFR Y RYA L++WKVE++SSS+N  GGYKE++A I G+GV+SR+KFE
Sbjct: 116 TGGDEAGIFVGDLFRTYCRYADLKRWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFE 175

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           +G HRVQRVP TE+ GR+HTSA TVA++PEA +++++I   D+RI+  RA G GGQ VNT
Sbjct: 176 AGTHRVQRVPETESQGRIHTSAITVAIMPEADDVEININPSDLRIEVFRAGGHGGQCVNT 235

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIPTGI V+   EKSQH+NR +A+K+L+ARLY+ + +      SA RK+Q+G
Sbjct: 236 TDSAVRITHIPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQAHSAERKMQVG 295

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIG 353
           SGDRSERIRTYN+ Q R++DHRINLTLY LE ++  G +D +I PL+   QA+ + 
Sbjct: 296 SGDRSERIRTYNYPQNRLSDHRINLTLYSLEELMLSGNLDPVIEPLIAHAQAQGLE 351


>gi|269215990|ref|ZP_06159844.1| peptide chain release factor 1 [Slackia exigua ATCC 700122]
 gi|269130249|gb|EEZ61327.1| peptide chain release factor 1 [Slackia exigua ATCC 700122]
          Length = 356

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 159/357 (44%), Positives = 222/357 (62%), Gaps = 14/357 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDL 62
            +++  +   +AEIE ++ +   +    +   L++E+A  + ++ K + Y Q  ++  D 
Sbjct: 6   REKLTKIIEGYAEIEEKLGDPAVLADQREYTRLSKEFANQAALVGKANDYLQACRDIDDA 65

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++G    D ++R+ AQ  +   E ++  L   I  +L+P D  D+K  I+EIR   GG
Sbjct: 66  KEMLG----DPDMREFAQETIAESEAKLPALAETIKVMLIPDDPADEKDIIVEIRGAAGG 121

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAA+F GDL++MY R+   R WKVE L +S ++ GG+K+I   + G  V+S MKFESGV
Sbjct: 122 DEAAIFAGDLYKMYVRFCESRGWKVENLDASASEAGGFKKIEFKVKGDHVYSLMKFESGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR+ TS ATVAVLPEA EIDV+I   D+RID  RA G GGQ VNTTDS
Sbjct: 182 HRVQRVPKTESQGRIQTSTATVAVLPEADEIDVEINEGDLRIDVYRAGGPGGQCVNTTDS 241

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+P+G++V +  +KSQ QN++ AM VLRARLY+           A R  QIGSGD
Sbjct: 242 AVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQAAEGAERLAQIGSGD 301

Query: 302 RSERIRTYNFSQGRITDHRINLT-LYKLEYVL--QGYIDDIINPLLTAHQAKMIGSA 355
           R+E+IRTYN  Q R+TDHRI     Y    VL   G + D+I  L  A +A+ +  A
Sbjct: 302 RAEKIRTYNAPQDRVTDHRIGYNGTYN--GVLLADG-LADLIVALQAADRARKLEQA 355


>gi|284929590|ref|YP_003422112.1| peptide chain release factor 1 [cyanobacterium UCYN-A]
 gi|284810034|gb|ADB95731.1| bacterial peptide chain release factor 1 (bRF-1) [cyanobacterium
           UCYN-A]
          Length = 367

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 144/353 (40%), Positives = 228/353 (64%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++  F E+  R+++     + +   K+ +  +++   ++    + + ++E  +   
Sbjct: 9   KLHSVEQTFNELTRRLADPSIATNPNELQKVAKTRSSLEETVNAYEQWKKTEKELLETKQ 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D E+R++A IE   +E ++  LE  +  LLLP+D +DDK+ +LEIRAGTGG E
Sbjct: 69  IVKDAGGDHEMREMASIEAKELEIKLNNLEELMKILLLPRDPNDDKNIMLEIRAGTGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+++ GDL RMY RYA  + W V++ + S  D GG KE +  I+G  VFS++KFE+GVHR
Sbjct: 129 ASIWAGDLARMYSRYAESQNWVVKLANESLADMGGIKETILEITGDKVFSKLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA GRVHTS ATVA++PE  E++V I  +DI + T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPVTEAGGRVHTSTATVAIMPEVDEVEVKIDAKDIDMSTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RAM++LRA+LY+ + +    E S+ RK Q+G+G RS
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEEISSMRKSQVGTGSRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R+TDHR+    + L  +L+G ID +I   ++  Q + +   +
Sbjct: 309 EKIRTYNYKDNRVTDHRLG-QNFALSGILEGDIDILIESCISQDQQERLQELA 360


>gi|116072171|ref|ZP_01469439.1| peptide chain release factor 1 [Synechococcus sp. BL107]
 gi|116065794|gb|EAU71552.1| peptide chain release factor 1 [Synechococcus sp. BL107]
          Length = 365

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 225/354 (63%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E ++++    +   +L     E + + P++       + +QE+ D   
Sbjct: 9   RLQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQVDARE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +  SD+ +++LAQ E+  +E +   L   +   LLP+D  DD+S +LEIRAG GG E
Sbjct: 69  LLRESRSDAAMQELAQNELCELEAQHAALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V+ LS ++ D GGY+E++ ++ G  VFS++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGASVFSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V +  +D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + ++SQ QNR RA+++LRA+L + E    A   S++R+ Q+GSGDRS
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAAAERESSDRRSQVGSGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R TDHR+      LE VLQG ++D+I   +   Q + + + SE
Sbjct: 309 EKIRTYNYKDNRTTDHRLGRNFS-LEPVLQGQLEDLIGACIAEEQRQKLEALSE 361


>gi|226360607|ref|YP_002778385.1| peptide chain release factor 1 [Rhodococcus opacus B4]
 gi|226239092|dbj|BAH49440.1| peptide chain release factor 1 [Rhodococcus opacus B4]
          Length = 359

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 147/356 (41%), Positives = 214/356 (60%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+    A +E ++++    +      K  + +A ++PI++  +     + +      +
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDASAARKAGKRFAELAPIMATYTRLKSAQDDLDAAREL 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D +S          EV A+E+++ EL+  +  LL P+D  D    +LE+++G GG E+
Sbjct: 70  AADDSS-------FAAEVPALEEQVLELDKTLTDLLAPRDPHDGDDVVLEVKSGEGGEES 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-----GRGVFSRMKFES 180
           ALF  DL RMY RYA    W+VE+L ++ +D GGYK+   +I        GV++R+KFE 
Sbjct: 123 ALFASDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEG 182

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V + PE  E++   I   D+RID  R+SG GGQ VNT
Sbjct: 183 GVHRVQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNT 242

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL     +    E SA R+ Q+ 
Sbjct: 243 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVR 302

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + RITDHRI    + L+ VL G +D +++ L  + +   + +
Sbjct: 303 TVDRSERIRTYNFPENRITDHRIGFKSHNLDAVLDGELDALLDALGKSDREARLAA 358


>gi|229816317|ref|ZP_04446624.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM
           13280]
 gi|229808073|gb|EEP43868.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM
           13280]
          Length = 355

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 149/341 (43%), Positives = 215/341 (63%), Gaps = 7/341 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +   F E+E ++S+      +  + +L +EYA  + ++     Y     +   
Sbjct: 1   MRDKLEKIIIAFEELEKKLSDPAVASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIDV 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D   D++ +++ Q+E+   E ++ +LE +I  +L+P D  D+K  I+EIR+  G
Sbjct: 61  AKEMLHDA-VDADEKEMLQMEISENEAKLPQLEEDIKIMLIPGDPMDEKDTIVEIRSAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDLF+MY+R+   +KWK+ VL SS ++ GG+K I   + G  V+S MK+ESG
Sbjct: 120 GDEAAIFAGDLFKMYQRFIESKKWKMTVLDSSPSEAGGFKSIEFKVEGDKVYSVMKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+ TS ATVAVLPEA EID+ I   D+R+DT  ASG GGQ VNTT 
Sbjct: 180 VHRVQRVPKTESQGRIQTSTATVAVLPEADEIDIQINQADLRVDTYCASGPGGQCVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY++E ++   E  A R  QIG G
Sbjct: 240 SAVRITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAELGAERSAQIGHG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDII 340
           +RSE+IRTYN  Q R+TDHRI         VL G  + D+I
Sbjct: 300 NRSEKIRTYNLPQDRVTDHRIGFNSTY-NGVLLGDQLSDVI 339


>gi|67923568|ref|ZP_00517041.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
 gi|67854594|gb|EAM49880.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
          Length = 370

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 140/354 (39%), Positives = 236/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  + E+  R+++     + D   ++ +  +++   ++    + + ++E +   
Sbjct: 8   EKLQSVEQTYQELTRRLADPDIATNPDELQRVAKLRSSLEETVNTYQTWQETQEELKGAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +  SD E+R++A +EV  +E+ I +LE  +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QILKEAGSDPEMREMASMEVSELEENIEQLEERLKILLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  ++W V+++S S  D GG+KE +  I+G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYAESQRWNVKLVSESLADMGGFKEAILEITGEQVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  +++++I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAIMPEVDDVEIEIDPKDIEMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +      S+ R+ Q+G+G R
Sbjct: 248 VDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR++     +   L+G ID+II   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLSQNFALVGA-LEGDIDNIIESCISQDQQERLAELA 360


>gi|225436757|ref|XP_002269884.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086617|emb|CBI32252.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 129/353 (36%), Positives = 220/353 (62%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +++++   V     Y KL +  A +  ++S    +   +++ ++   
Sbjct: 52  KLESAEKTWKELSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKDCEKQLEEAKA 111

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D+++ ++   E+  +  +++ELE  I  LLLP D  D ++ +LE+RAGTGG E
Sbjct: 112 LAKEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDE 171

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMY++Y+    WK   +SSS+ + GG+K  V  + G  V+S++K+ESGVHR
Sbjct: 172 AGIWAGDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHR 231

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTS ATVA++PEA E++V I  +DI + T R+ G+GGQ+VN  ++AV
Sbjct: 232 VQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 291

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E++Q QNR RA+++LRA+LY+++ +         RK Q+G+G R+
Sbjct: 292 DLFHKPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQELIRNQRKSQVGTGARA 351

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R+TDHR+ +  ++L   L G I+  +   +   Q +++   +
Sbjct: 352 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGDIETAVQSCVAMEQKELLEELA 403


>gi|300741300|ref|ZP_07071321.1| peptide chain release factor 1 [Rothia dentocariosa M567]
 gi|311113380|ref|YP_003984602.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931]
 gi|300380485|gb|EFJ77047.1| peptide chain release factor 1 [Rothia dentocariosa M567]
 gi|310944874|gb|ADP41168.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931]
          Length = 360

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 146/362 (40%), Positives = 211/362 (58%), Gaps = 18/362 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + I  L +   E++ ++++           ++   YA ++ I++  + Y     + +   
Sbjct: 3   ESIQVLLDEHTELQEQLADPAVQANQGKARRVGRRYAELTGIVTAYNKYKSLADDLEAAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D +           +E+    L      LL+P+D DD ++ ILE++AG GG 
Sbjct: 63  EMASE---DPDFAAEIPTLEAELEEAQERL----RRLLIPRDPDDGRNVILEVKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           EAALF GDL RMY RYA  + WK EV+SS+  D GGYK+    I         GV++ MK
Sbjct: 116 EAALFAGDLLRMYLRYAEHKGWKTEVISSTSTDVGGYKDAQIAIKGTSNEPAEGVWAHMK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
           +E GVHRVQRVPATE+ GR+HTSAA V V PE     +++I   D++ID  R+SG GGQ 
Sbjct: 176 YEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEIEISQNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR  AM+VLRARL   +++++  E +A+R  
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRAS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+ + DRSERIRTYNF + RI DHR     Y L+ VL G +D ++   +   +A  +   
Sbjct: 296 QVRTMDRSERIRTYNFPENRIADHRTGYKAYNLDAVLDGDLDPVVQSAIEMDEAHRLEQV 355

Query: 356 SE 357
            +
Sbjct: 356 GQ 357


>gi|32491094|ref|NP_871348.1| hypothetical protein WGLp345 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173141|sp|Q8D2K9|RF1_WIGBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25166301|dbj|BAC24491.1| prfA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 364

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 149/353 (42%), Positives = 233/353 (66%), Gaps = 9/353 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  LKNR+ EI++ +S+  S         L++EY+ ++ +   +   +      +   
Sbjct: 13  QKLKKLKNRYKEIKIILSDPFSAKKQKNFFLLSKEYSKLNILNKYLKSLESINNTIESTK 72

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           T++     D E+ DLA+ E+   + + + +E +I   L+P + +   +C +EIR+GTGG 
Sbjct: 73  TMLL----DPEMHDLAKNEINIYKNKKKLIEKKIILYLIPNEDEYICNCFIEIRSGTGGK 128

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LFV DL RMY +Y+ ++ WK ++++ S+++ GGYKE++  I  +  ++++KFESG H
Sbjct: 129 EASLFVRDLCRMYIKYSEIKNWKTDIINYSNSEHGGYKEVIIKICNKNAYNKLKFESGGH 188

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQR+P TE+ GR+HTS  T+AV+PE  +     I   D+RIDT R+SG+GGQH+NTTDS
Sbjct: 189 RVQRIPETESQGRIHTSTCTIAVMPEMLDFKLPKIKTSDLRIDTFRSSGAGGQHINTTDS 248

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+RITHIPT I+V    E+SQH+N+ +AM VL++RL     K    +    RK  +GSGD
Sbjct: 249 AIRITHIPTNIVVECQDERSQHKNKSKAMLVLKSRLQANLLKNKKQKEEIIRKSLLGSGD 308

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RS+RIRTYNF QGRITDHRINLT+YK++ V+ G ++ +INP+L  ++ + I  
Sbjct: 309 RSDRIRTYNFPQGRITDHRINLTIYKIDEVMDGNLNILINPILEKYELEKIKE 361


>gi|87124992|ref|ZP_01080839.1| peptide chain release factor [Synechococcus sp. RS9917]
 gi|86167312|gb|EAQ68572.1| peptide chain release factor [Synechococcus sp. RS9917]
          Length = 365

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 215/353 (60%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E ++++        +L     E + + P++   +   Q + E      
Sbjct: 9   RLEAASTSFRNLERQLADPDVAADPKRLETIARERSRLEPLVQDFASLQQVESERDQAKA 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D  +++LAQ E+  +E     L  ++   LLP D  D +S +LEIRAG GG E
Sbjct: 69  LLRESREDPAMQELAQQELDQLEVRRSALLEQLTLALLPTDPRDGRSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYERY   + W V+ +S++  D GGY+E++ ++ G  VFS++KFE+GVHR
Sbjct: 129 ACLWAGDLARMYERYGTRQHWTVQPVSANAADLGGYRELILSVKGEAVFSKLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   ++ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPTELEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RA+++LRA+LY+ +        S+ R+ Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERQLAEANARESSARRAQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN    R+TDHR+      L+ VL+G +D++I   +   Q   + + S
Sbjct: 309 EKIRTYNAKDNRVTDHRLGRNFG-LDPVLEGQLDEVIGACIAEEQRAKLEALS 360


>gi|169351467|ref|ZP_02868405.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552]
 gi|169291689|gb|EDS73822.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552]
          Length = 358

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 150/360 (41%), Positives = 232/360 (64%), Gaps = 6/360 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M     +++  ++NR+ E+   + +        K   +T+E A++         Y + + 
Sbjct: 1   MNESMLERLKTMENRYEELGHMLMDPDIGSDIKKMTDVTKEQASLQAAYDLYQEYKEIEN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   +  +H  D EI+++A++E+  +E+++ ++  ++   L+PKD +D+K  I+EIR
Sbjct: 61  GIEEAKELAKEH--DPEIKEMAKMELAELEEKLPDVIKKLEIELIPKDPNDNKDVIMEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG E  +F GDL+RMY +YA  + WKVEV+ + D + GGY  I   + G GV+ ++K
Sbjct: 119 GAAGGDEGNIFAGDLYRMYVKYAESQGWKVEVMEAIDAEAGGYSLISFMVKGEGVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESG HRVQRVP TE  GRVHTS ATV V+PE  E+DV+I   D+RIDT RASG+GGQH+
Sbjct: 179 FESGSHRVQRVPKTETQGRVHTSTATVLVMPEVEEVDVEINKNDLRIDTYRASGAGGQHI 238

Query: 238 NTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVRITHIPTGI+  +   +SQH N+ +AMK L AR+YD  +++   +  + RK +
Sbjct: 239 NKTDSAVRITHIPTGIVAASQDGRSQHDNKDKAMKALIARIYDYYQQQQDQQVESERKSK 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +G+GDR+E+IRTYN+ Q R+TDHRI LT+ +L+ +++G +DDII  L+   Q   +   +
Sbjct: 299 VGTGDRAEKIRTYNYPQNRVTDHRIGLTIQQLDRIIEGKLDDIITALINEDQRLKLEGQN 358


>gi|126658019|ref|ZP_01729171.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
 gi|126620657|gb|EAZ91374.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
          Length = 369

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 236/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  + E+  R+++     + D   ++ +  +++   ++    + + ++E +   
Sbjct: 8   EKLQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQEELKGAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++A +EV  +E+++++LE ++  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QIVKEAGGDPEMREMAAMEVSELEEQLQQLEEQLKILLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  +KW V+++S S  D GG+KE +  I+G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  E+++ I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAIMPEVDEVEIQIDPKDIEMTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+ + +      S+ R+ Q+G+G R
Sbjct: 248 VDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEAVSSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+    + L   L+G ID+II   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLG-QNFALAGALEGNIDNIIETCISQDQQERLAELA 360


>gi|166368082|ref|YP_001660355.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
 gi|189039979|sp|B0JYC5|RF1_MICAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166090455|dbj|BAG05163.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
          Length = 366

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 143/354 (40%), Positives = 231/354 (65%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  ++  + E+  R+++           +L +  A++   ++   I+ + +++     
Sbjct: 8   DKLQSVEQTYKELTRRLADPDVTGNPGELHRLAKSRASLEETVNTYEIWQKSQEDLIGAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +  SD E+R++A +EV  +E++I  LE+++  LLLP+D  D+K+ +LEIRAGTGG 
Sbjct: 68  QIFKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL R+Y +YA  + WKV +LS S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEIKGDNVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEASGRVHTS ATVA++PE  +++V I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LYD++ +      S+ R+ Q+G+G R
Sbjct: 248 VDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+N     L+ +L G I+++I   +   Q + +   +
Sbjct: 308 SEKIRTYNYKDNRLTDHRLNQNFS-LDRILDGDIEEVIQSCIAKDQQEKLAELA 360


>gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383]
 gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp.
           383]
          Length = 391

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L  E   +  +++ ++  D   ++  DL  + 
Sbjct: 54  DAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELA 113

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +    +       +        I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 114 REEGDEDTLVASEEDAAKLASRVGD-----IEFRRMFSNPADPNNCFIDIQAGAGGTEAC 168

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     +SG   +  ++ E+G+HR+ 
Sbjct: 169 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAYGFLRTETGIHRLV 228

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 229 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 288

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RLY+VE ++   E+    + K  +G G  
Sbjct: 289 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG-- 346

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +     VL G +DD I+  L  
Sbjct: 347 -HQIRSYVLDQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389


>gi|159027581|emb|CAO86953.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 366

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 144/353 (40%), Positives = 230/353 (65%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++  + E+  R+++           +L +  A++   ++   I+ + +++      
Sbjct: 9   KLQSVEQTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQEDLIGAKQ 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +  SD E+R++A +EV  +E +I  LE+++  LLLP+D  D+K+ +LEIRAGTGG E
Sbjct: 69  IFKESASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+++ GDL R+Y +YA  + WKV +LS S  D GG+KE +  I G  V+S++KFE+GVHR
Sbjct: 129 ASIWAGDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEASGRVHTS ATVA++PE  +++V I  +DI + T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RAM++LRA+LYD++ +      S+ R+ Q+G+G RS
Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQEAVSSMRRSQVGTGSRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R+TDHR+N   + L+ +L G I+D+I   +   Q   +   +
Sbjct: 309 EKIRTYNYKDNRLTDHRLN-ENFSLDRILDGDIEDVIQSCIAKDQQGKLEELA 360


>gi|297192053|ref|ZP_06909451.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719497|gb|EDY63405.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 359

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 216/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI+     + +  ++     
Sbjct: 3   EAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVGTYRAWKRTGEDIGTAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +EKE   L  ++  LL+P+D  DDK  ILE++AG GG 
Sbjct: 63  ELAQDDPD-------FAAEVKDLEKEREALTEKLRLLLVPRDPSDDKDVILEVKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA EIDV+I   D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEIDVEIHANDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI+    +EKSQ QN+ +AM++LR+RL    ++   ++ +  
Sbjct: 236 GQSVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAESKAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 347


>gi|56751903|ref|YP_172604.1| peptide chain release factor 1 [Synechococcus elongatus PCC 6301]
 gi|81301012|ref|YP_401220.1| peptide chain release factor 1 [Synechococcus elongatus PCC 7942]
 gi|81561678|sp|Q5N0T6|RF1_SYNP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361627|sp|Q31L36|RF1_SYNE7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56686862|dbj|BAD80084.1| peptide chain release factor RF-1 [Synechococcus elongatus PCC
           6301]
 gi|81169893|gb|ABB58233.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus
           elongatus PCC 7942]
          Length = 368

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 144/355 (40%), Positives = 232/355 (65%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F ++  R+++         + ++    +++  +++    + Q+  E +   
Sbjct: 8   EKLQSVEQTFQDLTRRLADPEIATDPREFQRVARMRSSMEELVTTYEEWKQRDAELKGAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ + + D E+R++A +EV  +E  +  LE  +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  EILRESSGDPELREMAALEVNELEALLVSLEERLKILLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+L+ GDL RMY RYA  + W+V++LS S  + GGYKE +  I G  V+S++KFE+GVH
Sbjct: 128 EASLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEIQGESVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEA GRVHTS ATVA++PE  E++V I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEAGGRVHTSTATVAIMPEVDEVEVSIDPKDIELTTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +      S+ R+ Q+G+G R
Sbjct: 248 VDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQQEAVSSMRRSQVGTGSR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+   R TDHR+ L    L  VL+G I+++I   ++  Q + +   ++
Sbjct: 308 SEKIRTYNYKDNRATDHRLGLNFS-LNPVLEGEIEEVIQACISKDQTEQLAQMAQ 361


>gi|191166656|ref|ZP_03028484.1| peptide chain release factor 1 [Escherichia coli B7A]
 gi|190903305|gb|EDV63026.1| peptide chain release factor 1 [Escherichia coli B7A]
          Length = 321

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 166/320 (51%), Positives = 236/320 (73%), Gaps = 6/320 (1%)

Query: 40  AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINY 99
           A++S +    + + Q +++ +    ++     D E+R++AQ E+   +++  +LE ++  
Sbjct: 4   ASLSDVSRCFTDWQQVQEDIETAQMML----DDPEMREMAQDELREAKEKSEQLEQQLQV 59

Query: 100 LLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG 159
           LLLPKD DD+++  LE+RAGTGG EAALF GDLFRMY RYA  R+W+VE++S+S+ + GG
Sbjct: 60  LLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGG 119

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIP 218
           YKEI+A ISG GV+ R+KFESG HRVQRVPATE+ GR+HTSA TVAV+PE  + +  DI 
Sbjct: 120 YKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN 179

Query: 219 LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARL 277
             D+RIDT R+SG+GGQHVNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR+
Sbjct: 180 PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARI 239

Query: 278 YDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +  E  +     ++ R+  +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D
Sbjct: 240 HAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLD 299

Query: 338 DIINPLLTAHQAKMIGSASE 357
            +I P++  HQA  + + SE
Sbjct: 300 MLIEPIIQEHQADQLAALSE 319


>gi|291618681|ref|YP_003521423.1| PrfB [Pantoea ananatis LMG 20103]
 gi|291153711|gb|ADD78295.1| PrfB [Pantoea ananatis LMG 20103]
          Length = 430

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+       Q  ++ Q L  + 
Sbjct: 93  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTFDQMSQGLEDVQGLLDLA 152

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    +     E+ +  +     D   C ++++AG+GG+EA 
Sbjct: 153 VEADDEETFNEAV-----AELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 207

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  S+ +  G K +   +SG   F  ++ E+GVHR+ 
Sbjct: 208 DWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLV 267

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  + PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 268 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 327

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTG +    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 328 ITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWG-- 385

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 386 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 428


>gi|149196233|ref|ZP_01873288.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155]
 gi|149140494|gb|EDM28892.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155]
          Length = 358

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 150/358 (41%), Positives = 235/358 (65%), Gaps = 6/358 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M+ +S +++  L+ RF ++E  +S+    D    Y  L++E+  +S ++      ++ K 
Sbjct: 1   MIDIS-ERVERLRMRFKQVESELSDPSVFDDKDRYQDLSKEHQRLSSLVQTYDRQEEVKA 59

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           E  D   ++    SD E++++ ++++  +E+E+  LE ++  L++P D +D ++CI+EIR
Sbjct: 60  ELADNKEMLS-GESDEELKEMIKLDMAGLEEELPLLEKKLMMLIVPPDPNDSRNCIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EAALF  DL +MY+ Y++ + WKVEV+  + +D GG K  V ++ G  VF  + 
Sbjct: 119 PAAGGDEAALFAEDLMKMYQIYSSNKSWKVEVMEYTPSDLGGLKATVFSVKGEDVFRELN 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQR+P TE  GRVHTS  TVAVLPEA E+D+ I  ++++ DT R+SG+GGQ V
Sbjct: 179 FESGVHRVQRIPKTETQGRVHTSTVTVAVLPEAEEVDLHIDPKELKFDTYRSSGAGGQCV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+THIPTG+   +  E+SQHQN+  AM++LR++L D + ++   + S  R+ Q
Sbjct: 239 NTTDSAVRVTHIPTGLACYSQQERSQHQNKEIAMQLLRSKLLDEKIRQEKQKMSDERRGQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           IG+GDRSERIRTYN+ Q RITDHR  +T++ L  V+ G   D+++ +L     + +  
Sbjct: 299 IGTGDRSERIRTYNYPQSRITDHRFGVTVHNLPDVMAGKFADVMDKILAIDAEQRLAE 356


>gi|148238741|ref|YP_001224128.1| peptide chain release factor 1 [Synechococcus sp. WH 7803]
 gi|166223613|sp|A5GIR6|RF1_SYNPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147847280|emb|CAK22831.1| Peptide chain release factor 1 [Synechococcus sp. WH 7803]
          Length = 365

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 221/353 (62%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   ++ F  +E ++++        +L     E + + P+++  +     + E +    
Sbjct: 9   RLEAARSSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYASLQAVQSEREQARE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D E+  LAQ+E+  ++     L   +   LLP+D  D++S +LEIRAG GG E
Sbjct: 69  LLRDSRGDEEMAHLAQLELDELDIRHEALIERLTLALLPRDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYER+++ R W V+ +S+S+ D GG+KE++ ++ G  VFS +KFE+GVHR
Sbjct: 129 ACLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGESVFSELKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H P+GI +  + E+SQ QNR RAM++LRA+LY+ +        S+ R+ Q+G+GDRS
Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAEANARESSARRAQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN    R+TDHR+      L+ VLQG ++D+I   +   Q   + + S
Sbjct: 309 EKIRTYNAKDNRVTDHRLGRNFS-LDPVLQGQMEDVIGACIAEEQRSKLEALS 360


>gi|297202390|ref|ZP_06919787.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
 gi|197710089|gb|EDY54123.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
          Length = 358

 Score =  248 bits (633), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 215/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI++    + Q   + +   
Sbjct: 3   EAVEELVGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATYRSWKQTGDDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D   D+E     +    A ++   +L      LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELGAD---DAEFAAEVKELEKARDELTEKL----RLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ +++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +RMK+E GVHRVQRVPATE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG G
Sbjct: 176 ARMKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVDVEINPNDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITHIPTG++    +EKSQ QN+ +A+++LR+RL    ++      +  
Sbjct: 236 GQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAERNAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKSYNLDQVLDGDLDAVIQACV 347


>gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
 gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
          Length = 391

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L  E   +  +++ ++  D   ++  DL  + 
Sbjct: 54  DAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELA 113

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +             ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 114 REEGDEDTLLASE-----DDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 168

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     ++G   +  ++ E+G+HR+ 
Sbjct: 169 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLV 228

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 229 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 288

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RLY+VE ++   E+    + K  +G G  
Sbjct: 289 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG-- 346

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +     VL G +DD I+  L  
Sbjct: 347 -HQIRSYVLDQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389


>gi|172038958|ref|YP_001805459.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
 gi|171700412|gb|ACB53393.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
          Length = 375

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 234/354 (66%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  + E+  R+++     + D   ++ +  +++   ++    + + ++E +   
Sbjct: 14  EKLQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQEELKGAK 73

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+R++A +EV  +E+++ +LE  +  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 74  QIVKEAGGDPEMREMAAMEVSELEEKLEQLEERLKILLLPRDPNDDKNIMLEIRAGTGGD 133

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  +KW V+++S S  D GG+KE +  I+G  V+S++KFE+GVH
Sbjct: 134 EASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKLKFEAGVH 193

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  E+++ I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 194 RVQRVPVTEAGGRVHTSTATVAIMPEVDEVEIQIDPKDIEMTTARSGGAGGQNVNKVETA 253

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+LY+ + +      S+ R+ Q+G+G R
Sbjct: 254 VDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEAVSSMRRSQVGTGSR 313

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+    + L   L+G ID+II   ++  Q + +   +
Sbjct: 314 SEKIRTYNYKDNRVTDHRLG-QNFALAGALEGNIDNIIETCISQDQQERLAELA 366


>gi|328885059|emb|CCA58298.1| Peptide chain release factor 1 [Streptomyces venezuelae ATCC 10712]
          Length = 358

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 219/352 (62%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI++    + Q   + +   
Sbjct: 3   EAVEELVGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRAWKQTGDDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +EK+  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAHDDPD-------FAAEVKQLEKDRDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ +++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE++GR+HTSAA V V PEA E++V+I   D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESAGRIHTSAAGVLVTPEAEEVEVEIHANDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI+    +EKSQ QN+ +AM++LR+RL    ++   ++ +  
Sbjct: 236 GQSVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAESKAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLDAMIQACV 347


>gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054]
 gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424]
 gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           cenocepacia AU 1054]
 gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           cenocepacia HI2424]
          Length = 391

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L  E   +  +++ ++  D   ++  DL  + 
Sbjct: 54  DAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELA 113

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +             ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 114 REEGDEDTLLASE-----DDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 168

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     ++G   +  ++ E+G+HR+ 
Sbjct: 169 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLV 228

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 229 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 288

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RLY+VE ++   E+    + K  +G G  
Sbjct: 289 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG-- 346

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +     VL G +DD I+  L  
Sbjct: 347 -HQIRSYVLDQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389


>gi|119897788|ref|YP_933001.1| peptide chain release factor 2 [Azoarcus sp. BH72]
 gi|119670201|emb|CAL94114.1| peptide chain release factor [Azoarcus sp. BH72]
          Length = 373

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +  ++  E+   + +    +      +L +E   +  ++  +   +Q+  + +DL  + 
Sbjct: 36  DEKSSKLEEVNRALEDPAVWNDAARAQELGKEKRQLEGVVLTLQQIEQQSADLKDLFDLA 95

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D     +           +  L  ++ +  +  +  D  +C +EI+AG GG+EA 
Sbjct: 96  DMEGDDDTFEAVE-----GDLVGLEALVGQLEFRRMFSNPMDPNACFIEIQAGAGGTEAQ 150

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L RMY RY   + + VE++  ++ +  G K      +G   +  ++ E+G+HR+ 
Sbjct: 151 DWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFTGDYAYGFLRTETGIHRLV 210

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS  +V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 211 RKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVR 270

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH PTGI+V   +++SQH+N+  AM +L+ARLY++E ++   E+    + K  IG G  
Sbjct: 271 ITHQPTGIVVQCQNDRSQHRNKDEAMSMLKARLYELELRKRQAEQQKLEDAKSDIGWG-- 328

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R    +   + VL G ++D I   L  
Sbjct: 329 -HQIRSYVLDQSRIKDLRTGYEVGNTQAVLDGDLEDFIAASLKQ 371


>gi|57504876|ref|ZP_00370851.1| peptide chain release factor 1 [Campylobacter coli RM2228]
 gi|305432416|ref|ZP_07401578.1| peptide chain release factor RF1 [Campylobacter coli JV20]
 gi|57019304|gb|EAL56006.1| peptide chain release factor 1 [Campylobacter coli RM2228]
 gi|304444455|gb|EFM37106.1| peptide chain release factor RF1 [Campylobacter coli JV20]
          Length = 355

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 170/354 (48%), Positives = 242/354 (68%), Gaps = 9/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++     RF E+   +S S  +        L++E   + PI+ K   Y +     ++  T
Sbjct: 5   KLDPFLKRFEELNSLLSSSDIISDISKMTALSKEQKNLEPIVLKAKEYLKTLDSIEENKT 64

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    +D+E+ +LA+ E+  +E+   +LE E+  LLLPKD +D+++  LEIRAGTGG E
Sbjct: 65  LL----NDAELGELAKEELKNLEELKPKLEEELKILLLPKDPNDERNIFLEIRAGTGGDE 120

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LFVGDL + Y RYA  R +K+E++SSS+   GG+KEI+  + G G FSR+K+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGAGAFSRLKYEGGTHR 180

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GR+HTSA T+AV+PE  +I+++I   D++ID MR+SG GGQ VNTTDSAV
Sbjct: 181 VQRVPQTESQGRIHTSAITIAVMPEVDDIEIEINPNDLKIDVMRSSGHGGQSVNTTDSAV 240

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V     KSQH+N+  AMKVL+ARLY+++      + S  RK Q+GSGDRS
Sbjct: 241 RITHLPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAQESEARKSQVGSGDRS 300

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q RI+DHRINLTLY+L+ +L  G  D++I PL+  +QA+ +   +
Sbjct: 301 ERIRTYNFPQNRISDHRINLTLYRLDAILQDGLFDEVIEPLIAHYQAESLQEQN 354


>gi|254778803|ref|YP_003056908.1| peptide chain release factor 1 [Helicobacter pylori B38]
 gi|254000714|emb|CAX28630.1| Peptide chain release factor 1 (RF-1) [Helicobacter pylori B38]
          Length = 352

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 244/354 (68%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    ++
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLED 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRFKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ RLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|297182853|gb|ADI19004.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_05I22]
          Length = 334

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 182/333 (54%), Positives = 238/333 (71%), Gaps = 3/333 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                 +  +  R  E+E ++S S  +   A   L+ E + + P+  +I +    + E +
Sbjct: 1   MSIDSSMDKVLERRQEVETKLSRSAELSSKALADLSRELSELRPVCEQIELVRALESELK 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +   D E++ +A+ EV  +++ I   +  +  LLLPKD DD ++ ILE+RAGT
Sbjct: 61  DAITMVVEAAGDDEMQAMAEAEVTLLKERIPIEKERLQLLLLPKDKDDSRNAILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +LF MY+R+AA   W+ EV+  S+   GGYKE  ATISG  VF+R+KFES
Sbjct: 121 GGDEAALFGANLFSMYQRFAAKNGWRFEVMEVSETGIGGYKEATATISGIDVFARLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GR+HTSAATVAVLPEA E+D+DI   D+RID  R+SG GGQ VNTT
Sbjct: 181 GVHRVQRVPETEAGGRIHTSAATVAVLPEAEEVDIDIDENDLRIDVFRSSGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V+  + KSQH+NR +AMK+LRARLYD ER R+ +ER+A RK Q+GS
Sbjct: 241 DSAVRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVESERAAARKGQVGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           GDRSERIRTYNF QGR+TDHRINLTLYKL+ V+
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLYKLDRVM 333


>gi|219684506|ref|ZP_03539449.1| peptide chain release factor 1 [Borrelia garinii PBr]
 gi|219671868|gb|EED28922.1| peptide chain release factor 1 [Borrelia garinii PBr]
          Length = 357

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 251/355 (70%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   +E ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MFLEKLNSATSKIKSLEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  +LE++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DNKTIL-EKEDQQEMKELIKQELIDLDKKREDLEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEIV  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL    Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDQLLDPLTIELQEQKLKS 354


>gi|254431314|ref|ZP_05045017.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
 gi|197625767|gb|EDY38326.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
          Length = 365

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 153/357 (42%), Positives = 223/357 (62%), Gaps = 5/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           L H ++   +  F  +E ++++     + D    +  E A + P++       +   EE 
Sbjct: 5   LLHDRLEAARRTFETLERQLADPAVASNPDQLQAIARERARLEPLVLDQRQLQKLLAEEA 64

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ DH  D  + +LA  E+  + + I  L   +   LLP+D  D++S +LEIRAG 
Sbjct: 65  DARTLLRDHRGDRAMEELASEELKQLAERIHSLRTSLTIALLPRDPRDERSVMLEIRAGA 124

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA++ GDL RMYERYA    W+VE +S+S+ + GGYKE++ +I G GVFS++KFE+
Sbjct: 125 GGDEAAIWAGDLARMYERYAQSVGWRVEPVSASEAELGGYKELILSIRGEGVFSQLKFEA 184

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  
Sbjct: 185 GVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIEPGDVEISTARSGGAGGQNVNKV 244

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AV + H P+GI +  + E+SQ QNR RAM++LRA+LY+ +         + R  Q+GS
Sbjct: 245 ETAVDLLHKPSGIRVFCTQERSQMQNRERAMEILRAKLYERQLAEANARERSARLAQVGS 304

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSE+IRTYN+   R TDHR+      LE VL G + D+I   + A QA+ +   +
Sbjct: 305 GDRSEKIRTYNYKDNRATDHRLGRNFS-LEPVLNGQLQDVIGACIAADQARQLDELA 360


>gi|315453082|ref|YP_004073352.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179]
 gi|315132134|emb|CBY82762.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179]
          Length = 349

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 171/352 (48%), Positives = 245/352 (69%), Gaps = 9/352 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++  +  R+  I   +++      +    +L++E A +  +      Y Q  +  Q
Sbjct: 1   MLSEKLQAIVQRYDAIAHSLTQPEVLGDIKQLTELSKEQAGLEELAQVAKTYLQTLEGIQ 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +  +++     D E+ +LA+ E+  +E+E   LE  I  LL+PKD +D+K+  LE+RAGT
Sbjct: 61  ENKSLLE----DKELGELAKEELKVLEEEKLSLEERIKILLIPKDPNDNKNIYLELRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKE++A I G+GV+SR+KFE+
Sbjct: 117 GGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEA 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GR+HTSA TVA++PE  +++V+I   D+RI+  RA G GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRIHTSAVTVAIMPEVDDVEVNINPNDLRIEVFRAGGHGGQCVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI V+   EKSQH+NR +A+K+L+ARLY+ + +      S +RK+Q+GS
Sbjct: 237 DSAVRITHIPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQANSESRKMQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GDRSERIRTYN+ Q R++DHRINLTLY LE ++  G +D +I PL+   QA+
Sbjct: 297 GDRSERIRTYNYPQNRLSDHRINLTLYSLEEIMLSGNLDPVIEPLIAHAQAQ 348


>gi|302869596|ref|YP_003838233.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC
           27029]
 gi|315503942|ref|YP_004082829.1| peptide chain release factor 1 [Micromonospora sp. L5]
 gi|302572455|gb|ADL48657.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC
           27029]
 gi|315410561|gb|ADU08678.1| peptide chain release factor 1 [Micromonospora sp. L5]
          Length = 362

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 155/365 (42%), Positives = 214/365 (58%), Gaps = 18/365 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +S +++  L + +AE+E R+++           ++   YA + P         +   E +
Sbjct: 1   MSSERLAALLDEYAELERRLADPAIHADQGTARRVGRRYAELVP-------LHKAAGELE 53

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
                +      +       +E   I   +  LE  +  LL+P+D  D K  I+EI+AG 
Sbjct: 54  QARADLAAARELAAEDATFAVEADTIAASLPALEERLAELLIPRDPHDAKDVIVEIKAGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVF 173
           GG E+ALF GDL RMY RYA    W  EV+ + D+D GG K++   I          GV+
Sbjct: 114 GGEESALFAGDLLRMYTRYAERHGWVTEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVW 173

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           SR+K+E GVHRVQRVP TE+ GR+HTSAA V VLPEA ++DV I   ++RID  R+SG G
Sbjct: 174 SRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEDVDVTIDPNELRIDVFRSSGPG 233

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI+V   +EKSQ QNR +AM++LRARL    +++     S  
Sbjct: 234 GQSVNTTDSAVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARLLAAAQEQADAAASDA 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           RK Q+ + DRSERIRTYNF Q RITDHRI  T Y L+  L G +D +++ L  A +A  +
Sbjct: 294 RKAQVRTVDRSERIRTYNFPQNRITDHRIGYTAYNLDLALAGELDGVLDALAEADRAARL 353

Query: 353 GSASE 357
              +E
Sbjct: 354 AGETE 358


>gi|78185551|ref|YP_377985.1| peptide chain release factor 1 [Synechococcus sp. CC9902]
 gi|119361629|sp|Q3AW64|RF1_SYNS9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78169845|gb|ABB26942.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus sp.
           CC9902]
          Length = 365

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 226/354 (63%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E ++++    +   +L     E + + P++       + +QE+ D   
Sbjct: 9   RLQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQADARE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +  SD+ +++LAQ E+  +E +   L   +   LLP+D  DD+S +LEIRAG GG E
Sbjct: 69  LLRESRSDAAMQELAQDELSELEAQHTALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V+ LS ++ D GGY+E++ ++ G  VFS++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGTSVFSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V++  +D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADAVEVELDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + ++SQ QNR RA+++LRA+L + E    A   S++R+ Q+GSGDRS
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAAAERESSHRRSQVGSGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R TDHR+      LE VLQG ++D+I   +   Q + + + SE
Sbjct: 309 EKIRTYNYKDNRTTDHRLGRNFS-LEPVLQGQLEDLIGACIAEEQRQKLEALSE 361


>gi|91201018|emb|CAJ74075.1| strongly similar to class I peptide chain release factor
           [Candidatus Kuenenia stuttgartiensis]
          Length = 360

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 238/353 (67%), Gaps = 8/353 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++ D++ R+ E+E  +++   +     Y+ L +E+  +S I+ K +   +    +QD  
Sbjct: 8   KRLEDMQKRYNELENLLADPQVIADSGRYMSLMKEHGCLSKIVHKYAQLTKTYIRKQDAE 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    SD E  D+A++E+  +E   + + +EI  L + +D   +K+ I EIRAGTGG 
Sbjct: 68  NLL----SDGEFADMARMELDELEGHEKAIMDEIKELFIAEDKTANKNVIAEIRAGTGGE 123

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA+F  DLFRMY +YA  + WK E+   ++ D GG+KE+  +I GR V+ +++FESG H
Sbjct: 124 EAAIFAADLFRMYIKYAESQNWKTELFDYNETDLGGFKEVTFSIEGRNVYQKLRFESGTH 183

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEASGRVHTS ATVA+LPE  E+++DI   DI I+T RASG GGQ VN T SA
Sbjct: 184 RVQRVPQTEASGRVHTSTATVAILPEVEEVEIDINPADILIETFRASGPGGQKVNKTSSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHI TGI+V    EKSQH+N+ +AM++LR+RL++   ++   ER   R++QIG+GDR
Sbjct: 244 VRITHISTGIVVKCLDEKSQHKNKAKAMRILRSRLHESIEEKNQLERDQVRRIQIGTGDR 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           SE+IRTYN+SQ R+TDHRIN ++Y LE+V+ GY+D+II  L   ++   +   
Sbjct: 304 SEKIRTYNYSQNRVTDHRINFSVYNLEHVMLGYLDEIIAALANHYREDQLKQL 356


>gi|308183875|ref|YP_003928008.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
 gi|308059795|gb|ADO01691.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
          Length = 352

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    ++
Sbjct: 1   MSILAEKLSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLED 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVEV+SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V +   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|154248977|ref|YP_001409802.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
 gi|154152913|gb|ABS60145.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
          Length = 347

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 167/346 (48%), Positives = 219/346 (63%), Gaps = 12/346 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +K    EIE +M E+  +   IK++ E+     I   I+ Y     E      +      
Sbjct: 8   VKKTLEEIEKKMMENLELKEMIKISAEFTKFKEIDELINEYFNLLDE----KELWEQEPG 63

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
             +            + +I ++ NEI  LLLP D   D++  LEIRAGTGG EAALF GD
Sbjct: 64  SEDEIAKL-------DSKIEKISNEIIALLLPDDEFRDRNVFLEIRAGTGGEEAALFAGD 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY RY+    W  E++  S +D GGYKE+V  I G+   + MK+E GVHRVQR+P T
Sbjct: 117 LLRMYLRYSERMGWSTEIIDESKSDLGGYKEVVVRIKGKNSGTYMKYERGVHRVQRIPVT 176

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           E+ GR+HTS ATVAVLPE  ++DV I  +DIRIDT RASG+GGQ+VN T+SA+RITHIPT
Sbjct: 177 ESGGRIHTSTATVAVLPEMKDVDVYIDPKDIRIDTYRASGAGGQYVNKTESAIRITHIPT 236

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           GI+V   SE+SQHQN+ +AM VLRA+LY++ RK    + S+ RK QIGSG+RSE+IRTYN
Sbjct: 237 GIVVTCQSERSQHQNKEKAMMVLRAKLYELARKEQDEKLSSQRKNQIGSGERSEKIRTYN 296

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           F Q R+TDHRINLT+Y L+ VL G +D II  L+     + +    
Sbjct: 297 FPQNRVTDHRINLTIYNLQAVLDGDLDLIIPKLMQYDIEEQLRELG 342


>gi|72162818|ref|YP_290475.1| peptide chain release factor 1 [Thermobifida fusca YX]
 gi|119361632|sp|Q47M70|RF1_THEFY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71916550|gb|AAZ56452.1| bacterial peptide chain release factor 1 (bRF-1) [Thermobifida
           fusca YX]
          Length = 355

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 150/361 (41%), Positives = 221/361 (61%), Gaps = 18/361 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ DL   + E+E ++++            L + Y+ ++PI++     ++ + + +    
Sbjct: 2   KLDDLLGEYYELEQQLADPAVHADQAQARTLAKRYSQLTPIVATYRELNRVESDIETAQE 61

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +  S ++              +  EL   +  LL+P+D +DDK  ILE++AG GG E
Sbjct: 62  LAAEDPSFADEAKQL-------AAQREELVQRLRTLLIPRDPNDDKDVILEVKAGEGGEE 114

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVFSRMK 177
           +ALF  DL RMY RYA  + WK E++S++ +D GGYK+I   I         +GV+ R+K
Sbjct: 115 SALFASDLVRMYLRYAERQGWKTEIISATHSDLGGYKDITIAIKNRGTVEPGQGVWHRLK 174

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FE GVHRVQRVP TE+ GR+HTSA  V VLPEA EI+V+I   D+RID  R+SG GGQ V
Sbjct: 175 FEGGVHRVQRVPVTESQGRIHTSAVGVLVLPEAEEIEVEINESDLRIDVYRSSGPGGQSV 234

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+V   +EKSQ QN+ +A++VLRARL    +     E +A R+ Q
Sbjct: 235 NTTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRVLRARLLAEAQAAAEAEAAAERRSQ 294

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSER+RTYNF + RI+DHR+    Y L+ VL G +D +I  L+ A   + + +A 
Sbjct: 295 VRTVDRSERVRTYNFPENRISDHRVGYKAYNLDQVLDGELDGVIQALVDADTKERLEAAQ 354

Query: 357 E 357
           +
Sbjct: 355 Q 355


>gi|208434043|ref|YP_002265709.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
 gi|238058715|sp|B5Z680|RF1_HELPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208431972|gb|ACI26843.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
          Length = 352

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    ++
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLED 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|312148979|gb|ADQ29050.1| peptide chain release factor 1 [Borrelia burgdorferi N40]
          Length = 357

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 253/355 (71%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   IE ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MLLEKLNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  +LE++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DTKTIL-EKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQ++N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQYKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL+ A Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQEQELKS 354


>gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134]
 gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia
           eutropha JMP134]
          Length = 357

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 170/339 (50%), Gaps = 15/339 (4%)

Query: 15  RFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  E+   + +    +   +   L +E  A+  ++S +           +L  +  +   
Sbjct: 25  RLEEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVSVLGKLTDDLNGADELFELAKEEGD 84

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +  +         K   E+   + +  +     D  +  ++I+AG GG+EA  +   
Sbjct: 85  DETLESIE-----TDVKGFEEIVAGMEFRRMFAGEMDQANAFIDIQAGAGGTEACDWASM 139

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L R Y +Y   + +K EVL  S+ D  G K     I G   F  ++ E+GVHR+ R    
Sbjct: 140 LLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRLVRKSPF 199

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           ++SG  HTS ++V V PE     +V++   D+R+DT RASG+GGQH+N TDSAVRITHIP
Sbjct: 200 DSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIP 259

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V   +++SQH+NR  AM +L++RLY+ E ++   E       K  +G G    +IR
Sbjct: 260 TGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWG---HQIR 316

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 317 SYVLDQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355


>gi|33866628|ref|NP_898187.1| peptide chain release factor 1 [Synechococcus sp. WH 8102]
 gi|46576726|sp|Q7U4H2|RF1_SYNPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33633406|emb|CAE08611.1| peptide chain release factor RF-1 [Synechococcus sp. WH 8102]
          Length = 365

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 138/354 (38%), Positives = 225/354 (63%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E ++++           K+  E A + P++         + E++    
Sbjct: 9   RLEAATASFRNLERQLADPDVAADPTRLEKIARERARLEPLVLDFEELQVLEGEQKQSRE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D+ + +LAQ ++ ++ +   EL  ++   LLP+D  D++S +LEIRAG GG E
Sbjct: 69  LLKECRGDAAMEELAQDDLASLNRRHAELTEKLTVALLPRDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY+    W V+ +SS++ D GG++E++ ++ G  VFS++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYSQKLGWNVQPISSNEADLGGFRELILSVKGDSVFSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V +  +D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H P+GI +  + E+SQ QNR RA+++LRA+L + E++  A   S++R+ Q+GSGDRS
Sbjct: 249 DLLHKPSGIRVFCTQERSQLQNRERALEILRAKLLEQEQREAAARESSDRRAQVGSGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R TDHR+      L+ VL G ++D+I   +   Q + + + S+
Sbjct: 309 EKIRTYNYKDNRTTDHRLGRNFS-LDPVLDGQLEDLIGACIAEEQRQKLEALSQ 361


>gi|297379299|gb|ADI34186.1| peptide chain release factor 1 [Helicobacter pylori v225d]
          Length = 352

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    ++
Sbjct: 1   MSILAEKLSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLED 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|15594541|ref|NP_212330.1| peptide chain release factor 1 [Borrelia burgdorferi B31]
 gi|216264551|ref|ZP_03436543.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218249543|ref|YP_002374724.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221217544|ref|ZP_03589014.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223889241|ref|ZP_03623829.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224532854|ref|ZP_03673469.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224534094|ref|ZP_03674677.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225549805|ref|ZP_03770769.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226321514|ref|ZP_03797040.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|3914620|sp|O51214|RF1_BORBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739097|sp|B7J1C9|RF1_BORBZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2688096|gb|AAC66592.1| peptide chain release factor 1 (prfA) [Borrelia burgdorferi B31]
 gi|215981024|gb|EEC21831.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218164731|gb|ACK74792.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221192607|gb|EEE18824.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223885274|gb|EEF56376.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224512243|gb|EEF82629.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224512793|gb|EEF83161.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225369613|gb|EEG99062.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226232703|gb|EEH31456.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|312148526|gb|ADQ31185.1| peptide chain release factor 1 [Borrelia burgdorferi JD1]
          Length = 357

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 253/355 (71%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   IE ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MLLEKLNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  +LE++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DTKTIL-EKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL+ A Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQEQELKS 354


>gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
           2522]
 gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
           2522]
          Length = 366

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 179/346 (51%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHT 64
            + + + R AE+E  MS+    D      +  +    +  ++      + ++++    + 
Sbjct: 25  DLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEMVDTYRELEAEQEDLDVSYE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    DL        +K            LL  +  D  + ILE+  G GG+E
Sbjct: 85  LVKEEGDEELAADLHAGIKELGKKFND-----FELQLLLSEPYDKNNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+R+A  + +KVE L     D+ G K +   ISG   +  +K E GVHR
Sbjct: 140 SQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMISGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++SGR HTS  +  V+PE    ++++I  + ++IDT RASG+GGQH+NTTDSA
Sbjct: 200 LVRISPFDSSGRRHTSFVSCEVMPELDDNVEIEISPDQLKIDTYRASGAGGQHINTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           VRITH+PT  +V   SE+SQ +NR +AMK+L+A+L+ +E +R   E    R  +  IG G
Sbjct: 260 VRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQQELDEIRGEQSDIGWG 319

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y F     + DHR N      + V+ G +D  I+  L 
Sbjct: 320 ---SQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLR 362


>gi|189218443|ref|YP_001939084.1| protein chain release factor A [Methylacidiphilum infernorum V4]
 gi|189185301|gb|ACD82486.1| Protein chain release factor A [Methylacidiphilum infernorum V4]
          Length = 377

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 146/360 (40%), Positives = 216/360 (60%), Gaps = 5/360 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
               + I  ++ +F +++  +S+        K   + +E+  +   +       Q +  +
Sbjct: 1   MQLDRYIEKIQKKFDKLQTELSKEELYTDPSKTIEIAKEHTRLKETLDLYGELKQIENAK 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             + ++  +           Q       K        +  L  P++    K+ I+EIRAG
Sbjct: 61  SSVESLAKETVDPEIQELAQQEITRLSNKIQELTMAILGSLFPPEENKSSKNVIIEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  DL+RMY +YA  + WK E+L  + ++ GG KE++ T+ G+  F +MKFE
Sbjct: 121 TGGEEAALFAADLYRMYSKYAEKKGWKQELLHFNPSELGGLKEVIFTVQGKEAFRKMKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVPATE+ GR+HTS ATVAVL E  E+++DI  ED+RI+  RASG GGQ VNT
Sbjct: 181 SGVHRVQRVPATESQGRIHTSTATVAVLLETEEVELDIKAEDLRIEVCRASGPGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAV++ HIP+GIMV    E+SQ +N+ +A+K+L+ARL   +++  A +R+  RK  IG
Sbjct: 241 TDSAVQVFHIPSGIMVRCQDERSQIKNKEKALKILKARLLARKQEEEAQKRAQERKSMIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG-SASE 357
           SG+R+E+IRTYNF QGR+TDHRI +TLY L+  + G ID I++ L+       I    +E
Sbjct: 301 SGERTEKIRTYNFPQGRVTDHRIPITLYNLQSFMDGDIDPIVDQLMQKEMELRIARELAE 360


>gi|121608524|ref|YP_996331.1| peptide chain release factor 1 [Verminephrobacter eiseniae EF01-2]
 gi|166223615|sp|A1WI56|RF1_VEREI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121553164|gb|ABM57313.1| bacterial peptide chain release factor 1 (bRF-1) [Verminephrobacter
           eiseniae EF01-2]
          Length = 359

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 165/361 (45%), Positives = 231/361 (63%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      Q+     R  E++  ++    +     Y  +  E+A ++ +  + + Y Q++ 
Sbjct: 1   MKPFLRSQLARHAQRLGELDFLLARPDIMADMVQYRSIAREHAEVTQVAGRYARYLQREA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      ++     D  + +LAQ E+ + + E+R+LE+E+  LLLPK+ DD ++  +EIR
Sbjct: 61  DLGAARELLA----DPGMAELAQEEIDSSQTELRQLEDELQRLLLPKEPDDARNAFVEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG E+ALF GDL RMY RYAA R W+V+VLS +  + GGYKEIV  I G  V+  +K
Sbjct: 117 AGTGGDESALFAGDLTRMYTRYAARRGWQVQVLSENPAELGGYKEIVLRIDGEQVYGTLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE  GRVHTSA TVAV+PE            ++RIDT RASG+GGQH
Sbjct: 177 FESGGHRVQRVPATETQGRVHTSACTVAVMPEPDPARAIALNPAELRIDTFRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N TDSAVR+ H+PTGI+      +SQH N+ RA++VL+ARL + ER   A + +A RK 
Sbjct: 237 INKTDSAVRVVHLPTGIVAECQDGRSQHGNKARALQVLQARLQEKERSERAAKEAALRKG 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            IGSG+RS+RIRTYNF QGR+TDHRI LTLY+L+ +L G +D ++  L  A +A+ +   
Sbjct: 297 LIGSGERSDRIRTYNFPQGRLTDHRIQLTLYQLQQLLDGELDPMLQALGHAREAEQLQEL 356

Query: 356 S 356
            
Sbjct: 357 E 357


>gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN]
 gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
 gi|13432207|sp|P45833|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790892|sp|B8ZR31|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae]
 gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
          Length = 361

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 150/364 (41%), Positives = 203/364 (55%), Gaps = 21/364 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + I  L    AE+EL +++     +     K    +A ++PI++        + + Q 
Sbjct: 4   PVQSIDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQT 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +     S ++            E  I EL  ++  +L P D       +LE+++G G
Sbjct: 64  ARELAAGDESFADEIAEL-------ESRIAELTTQLTDMLAPHDPHGPDDIVLEVKSGEG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG---------RGV 172
           G E+ALF  DL RMY RYA    W V VL  + +D GGYK+    IS           GV
Sbjct: 117 GEESALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGV 176

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASG 231
           +SRMKFE GVHRVQRVP TE+ GRVHTSAA V V PE  EI +V I   D+RID  R+SG
Sbjct: 177 WSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSG 236

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
            GGQ VNTTDSAVRITH+PTG++V   +E+SQ QN+ RA++VL ARL  +  ++     S
Sbjct: 237 KGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANAS 296

Query: 291 ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           A+R  QI + DRSERIRTYNF + RITDHRI    + L+ VL G +D + + L  A +  
Sbjct: 297 ADRASQIRTVDRSERIRTYNFPENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADKQS 356

Query: 351 MIGS 354
            +  
Sbjct: 357 RLQQ 360


>gi|15608439|ref|NP_215815.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv]
 gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
 gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97]
 gi|121637228|ref|YP_977451.1| peptide chain release factor 1 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148661087|ref|YP_001282610.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|148822517|ref|YP_001287271.1| peptide chain release factor 1 [Mycobacterium tuberculosis F11]
 gi|167969626|ref|ZP_02551903.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|215403141|ref|ZP_03415322.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|215410938|ref|ZP_03419746.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426621|ref|ZP_03424540.1| peptide chain release factor 1 [Mycobacterium tuberculosis T92]
 gi|215430186|ref|ZP_03428105.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|215445477|ref|ZP_03432229.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|218753007|ref|ZP_03531803.1| peptide chain release factor 1 [Mycobacterium tuberculosis GM 1503]
 gi|219557200|ref|ZP_03536276.1| peptide chain release factor 1 [Mycobacterium tuberculosis T17]
 gi|224989703|ref|YP_002644390.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799655|ref|YP_003032656.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           1435]
 gi|254231557|ref|ZP_04924884.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
 gi|254364196|ref|ZP_04980242.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254550307|ref|ZP_05140754.1| peptide chain release factor 1 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186238|ref|ZP_05763712.1| peptide chain release factor 1 [Mycobacterium tuberculosis CPHL_A]
 gi|260200352|ref|ZP_05767843.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|260204557|ref|ZP_05772048.1| peptide chain release factor 1 [Mycobacterium tuberculosis K85]
 gi|289442738|ref|ZP_06432482.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|289446894|ref|ZP_06436638.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554911|ref|ZP_06444121.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           605]
 gi|289569311|ref|ZP_06449538.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T17]
 gi|289573962|ref|ZP_06454189.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           K85]
 gi|289745045|ref|ZP_06504423.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|289749853|ref|ZP_06509231.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T92]
 gi|289753376|ref|ZP_06512754.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|289757399|ref|ZP_06516777.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|289761454|ref|ZP_06520832.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
           1503]
 gi|297633851|ref|ZP_06951631.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730838|ref|ZP_06959956.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524803|ref|ZP_07012212.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775471|ref|ZP_07413808.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu001]
 gi|306781618|ref|ZP_07419955.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu002]
 gi|306784023|ref|ZP_07422345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu003]
 gi|306788386|ref|ZP_07426708.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu004]
 gi|306792713|ref|ZP_07431015.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu005]
 gi|306797119|ref|ZP_07435421.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu006]
 gi|306802999|ref|ZP_07439667.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu008]
 gi|306807189|ref|ZP_07443857.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu007]
 gi|306967388|ref|ZP_07480049.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu009]
 gi|306971580|ref|ZP_07484241.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu010]
 gi|307079294|ref|ZP_07488464.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu011]
 gi|307083863|ref|ZP_07492976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu012]
 gi|313658170|ref|ZP_07815050.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54039048|sp|P66017|RF1_MYCBO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54041593|sp|P66016|RF1_MYCTU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223571|sp|A1KI87|RF1_MYCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223574|sp|A5U1Z8|RF1_MYCTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790891|sp|C1AMU3|RF1_MYCBT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1322423|emb|CAA97732.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
           tuberculosis H37Rv]
 gi|13880941|gb|AAK45600.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
 gi|31618081|emb|CAD94192.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
           bovis AF2122/97]
 gi|121492875|emb|CAL71346.1| Probable peptide chain release factor 1 prfA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124600616|gb|EAY59626.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
 gi|134149710|gb|EBA41755.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148505239|gb|ABQ73048.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|148721044|gb|ABR05669.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           F11]
 gi|224772816|dbj|BAH25622.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321158|gb|ACT25761.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           1435]
 gi|289415657|gb|EFD12897.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|289419852|gb|EFD17053.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289439543|gb|EFD22036.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           605]
 gi|289538393|gb|EFD42971.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           K85]
 gi|289543065|gb|EFD46713.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T17]
 gi|289685573|gb|EFD53061.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|289690440|gb|EFD57869.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T92]
 gi|289693963|gb|EFD61392.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|289708960|gb|EFD72976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
           1503]
 gi|289712963|gb|EFD76975.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|298494597|gb|EFI29891.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216019|gb|EFO75418.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu001]
 gi|308325580|gb|EFP14431.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu002]
 gi|308331256|gb|EFP20107.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu003]
 gi|308335072|gb|EFP23923.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu004]
 gi|308338880|gb|EFP27731.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu005]
 gi|308342494|gb|EFP31345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu006]
 gi|308346428|gb|EFP35279.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu007]
 gi|308350299|gb|EFP39150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu008]
 gi|308355000|gb|EFP43851.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu009]
 gi|308358948|gb|EFP47799.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu010]
 gi|308362830|gb|EFP51681.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu011]
 gi|308366496|gb|EFP55347.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu012]
 gi|323720256|gb|EGB29355.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902921|gb|EGE49854.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           W-148]
 gi|328459401|gb|AEB04824.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           4207]
          Length = 357

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 150/360 (41%), Positives = 210/360 (58%), Gaps = 17/360 (4%)

Query: 5   SHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + I  L    AE+EL +++     +     ++   +A ++PI++        + + + 
Sbjct: 4   PVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLET 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++    S          EV A+E  + EL+ ++  +L P+D  D    +LE+++G G
Sbjct: 64  ARELVASDES-------FAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRM 176
           G E+ALF  DL RMY RYA    W V VL  + +D GGYK+    I+       GV+SRM
Sbjct: 117 GEESALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GRVHTSAA V V PE  E+  V I   D+RID  R+SG GGQ
Sbjct: 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQ 236

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTGI+V   +E+SQ QN+ RA++VL ARL  +  ++   + SA+R 
Sbjct: 237 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRA 296

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            QI + DRSERIRTYNF + RITDHRI    + L+ VL G +D + + L  A +   +  
Sbjct: 297 SQIRTVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQ 356


>gi|210634612|ref|ZP_03298189.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279]
 gi|210158740|gb|EEA89711.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279]
          Length = 355

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 151/342 (44%), Positives = 218/342 (63%), Gaps = 7/342 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  +   F E+E ++S+      +  + +L +EYA  + ++     Y     + + 
Sbjct: 1   MRDKLEKIIIAFEELEKKLSDPSIASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ +  +D++ +++ Q+E+   E ++ +LE +I  +L+P D  D+K  I+EIR+  G
Sbjct: 61  AKEMLREA-TDADEKEMLQMEISENEAKLPQLEEDIKIMLIPGDPMDEKDTIVEIRSAAG 119

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDLF+MY+R+   +KWK+EVL SS +D GG+K I   ++G  V+S MK+ESG
Sbjct: 120 GDEAAIFAGDLFKMYQRFIESKKWKMEVLDSSPSDAGGFKSIEFKVTGDRVYSVMKYESG 179

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+ TS ATVAVLPEA EIDV I   D+RIDT  ASG GGQ VNTT 
Sbjct: 180 VHRVQRVPKTESQGRIQTSTATVAVLPEADEIDVQINQSDLRIDTYCASGPGGQCVNTTY 239

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY++E ++   E  A R  QIG G
Sbjct: 240 SAVRITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAELGAERSAQIGHG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIIN 341
           +RSE+IRTYN  Q R+TDHRI         VL G  +  +I 
Sbjct: 300 NRSEKIRTYNQPQDRVTDHRIGFNSTY-NGVLLGDQLSSVIE 340


>gi|283782510|ref|YP_003373265.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068]
 gi|283440963|gb|ADB19405.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068]
          Length = 358

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 147/356 (41%), Positives = 223/356 (62%), Gaps = 6/356 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQD 61
               +     RF E+E  M++   +    K+     E+ +++ +  K   + Q   E   
Sbjct: 1   MRDMLEQKLARFEELERMMTDPSLMSDSSKMGNVAREHGSLAKLAVKYRRFKQLNDEVAA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +     SD + R++A+ E+  +  E   + +E+  + +  +      C++EIRAG G
Sbjct: 61  LVEMSK--VSDPDEREMAEAEIPNVRAERERIWSEVLDMTVGGEDAQRSRCVMEIRAGVG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G+E ALF  DL++MY+R+   + WKVE++ +S  D GG+KE++    G GVF  +++ESG
Sbjct: 119 GAEGALFAQDLYQMYKRFGEKKGWKVELMEASPTDMGGFKEVILGFEGEGVFRELQYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TEA GRVHTSAATVAVLPE  +++V+I  ++ R+D   ASG GGQHVN T+
Sbjct: 179 GHRVQRVPETEAKGRVHTSAATVAVLPEPEDVEVNIKPDEYRLDKFCASGPGGQHVNKTE 238

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH  TGI+V+   EKSQH+N  +A+++L++RLYD  R+R   +R+A RK  +GSG
Sbjct: 239 SAVRLTHYETGIVVSMQDEKSQHKNLAKALRILKSRLYDFYRQREQAKRAAERKSLVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF + R TDHRI LTLYKL+ ++ G +  +++ L+   + ++     
Sbjct: 299 DRSERIRTYNFPENRCTDHRIGLTLYKLDQIINGDLQPVLDGLIEHDRNELRDQMG 354


>gi|219685818|ref|ZP_03540627.1| peptide chain release factor 1 [Borrelia garinii Far04]
 gi|219672651|gb|EED29681.1| peptide chain release factor 1 [Borrelia garinii Far04]
          Length = 357

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 250/355 (70%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++     +   +E ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MFLEKLNSATTKIKSLEEKLQDVNLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  +LE++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DNKTIL-EKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEIV  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL    Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDQLLDPLTIELQEQKLKS 354


>gi|258652312|ref|YP_003201468.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233]
 gi|258555537|gb|ACV78479.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233]
          Length = 361

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 145/358 (40%), Positives = 211/358 (58%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L   + ++++++S+           KL   YA ++PI++        + + Q    +
Sbjct: 9   VDALVAEYEDLQVKLSDPAVHADQAVSRKLGRRYAELTPIVTTARDLAATRGDLQAAQEL 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +    +E           +   + ELE  ++ LL P+D DD K  ++E++AG GG E+
Sbjct: 69  GAEDAGFAEEA-------RTLAGRVDELEQRLSELLAPRDPDDGKDVLVEVKAGEGGEES 121

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMY RYA  R WK EVLS++++D GGYK++   +         V++R+KFE 
Sbjct: 122 ALFAGDLLRMYLRYAERRGWKTEVLSATESDLGGYKDVTVAVKSPAATPDGVWARLKFEG 181

Query: 181 GVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V V        DV+I   D+RID  R+SG GGQ VNT
Sbjct: 182 GVHRVQRVPVTESQGRVHTSAAGVFVAPEVEDVNDVEIADADLRIDVFRSSGPGGQSVNT 241

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +EKSQ QN+ +AM++LRAR+    R       +  R+ Q+ 
Sbjct: 242 TDSAVRITHLPTGIVVSCQNEKSQLQNKEQAMRILRARMLAAARATADAAAADARRSQVR 301

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSER+RTYN+ + RI DHR+    Y L+ VL G +D +++ L  A +A+ +  A 
Sbjct: 302 TVDRSERVRTYNYPENRIADHRVGYKAYNLDAVLDGDLDAVLDALSAADRAERLAGAG 359


>gi|194364499|ref|YP_002027109.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
           R551-3]
 gi|238693440|sp|B4SKS8|RF1_STRM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194347303|gb|ACF50426.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
           R551-3]
          Length = 360

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 169/337 (50%), Positives = 232/337 (68%), Gaps = 10/337 (2%)

Query: 26  SPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
              V     +  L+ E+A + PI + ++   + K +      +      D ++R+LA  E
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPIATALADETRAKADLAAAEGMRA----DPDLRELADEE 81

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           + A +  ++ELE E+  LL+P+D  DD +  LE+RAGTGG EAA+F GDLFRMY RYA  
Sbjct: 82  IAAAQARLQELEQELALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAER 141

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + WKVE+ S +  + GGYKE+VA + GRG FSR+KFESG HRVQRVPATE+ GR+HTSAA
Sbjct: 142 QGWKVEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAA 201

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           TVA++PEA E+D  +    D+R+DT R+SG+GGQHVN T+SA+RITH+PTG++V   +E+
Sbjct: 202 TVAIIPEADEVDDIVINPADLRVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTER 261

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR 320
           SQH NR +AMK L+A+L D ER+R    ++ +R+LQ+GSGDRS+RIRTYNF QGRITDHR
Sbjct: 262 SQHANRDKAMKRLKAQLLDAERQRQDAAQAESRRLQVGSGDRSQRIRTYNFPQGRITDHR 321

Query: 321 I-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +  LTLY L  +L G +D ++  L   HQ   +   S
Sbjct: 322 VEGLTLYDLPNILAGDLDPLLQRLSHEHQVDALAQLS 358


>gi|225548553|ref|ZP_03769601.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
 gi|225370816|gb|EEH00251.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
          Length = 357

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 253/355 (71%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   IE ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MLLEKLNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTCLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  +LE++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DTKTIL-EKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL+ A Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQEQELKS 354


>gi|168056816|ref|XP_001780414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668174|gb|EDQ54787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 362

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 3/358 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M+ +  + +  +++R + +   +SES +  D  I+L++E + +  +++ I+     ++E 
Sbjct: 1   MLSIVERGMLAIEHRHSRLNQALSESAACPDEIIRLSKELSKLEDLMACITSLKNTRKEI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + L  +I +   D +++  A  E+ ++     E    +  L+LPKD  D + CILE+RAG
Sbjct: 61  EGLKMLIEESAEDEDMKQAAAEELRSVSNLETEDLQRMLLLMLPKDEADSRGCILEVRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA+LF  D+FRMYERYA  + W  EVLS +  +  GYKE  A+I+G GV+ ++KFE
Sbjct: 121 TGGDEASLFASDIFRMYERYAQKKLWSFEVLSITQTNSKGYKEASASITGDGVYGKLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE SGRVHTSAA+VAVLP+A E+DV +  ED+RIDT RA G+GGQH NT
Sbjct: 181 SGVHRVQRVPVTEKSGRVHTSAASVAVLPQADEVDVQMRNEDLRIDTYRAGGAGGQHANT 240

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH+PTGI++    E+SQH NR +++K+LRA+L++ ER + A  RS  R  QIG
Sbjct: 241 TSSAVRVTHLPTGIVIAIQDERSQHMNRAKSLKLLRAKLFERERMQQAMARSTLRLEQIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           SGDRSERIRTYNF QGR+TDHR+N+T + +  ++QG  +D  I+ L    +   + S 
Sbjct: 301 SGDRSERIRTYNFPQGRVTDHRVNITQHSIVQIMQGEGLDGFIDALTMKQEIAALASL 358


>gi|288922982|ref|ZP_06417139.1| peptide chain release factor 1 [Frankia sp. EUN1f]
 gi|288345658|gb|EFC80030.1| peptide chain release factor 1 [Frankia sp. EUN1f]
          Length = 356

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 18/358 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  +    A+IE R+++    +      +L+  YA ++  +      +  + + +    +
Sbjct: 5   LASMIAEHADIEKRLADPAIHNDPSVARELSRRYAELATPVDLALRLESVEGDLEAAREL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                S  +            E    EL + +   L+P D DD +  ILE++AG GG E+
Sbjct: 65  AEQDASFRDEITAL-------EDSRAELASRLRAYLVPTDPDDSRDAILEVKAGAGGEES 117

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF GDL RMY RYA  R W+ E+L ++ +D GGY+++   +        G+GVF R++F
Sbjct: 118 ALFAGDLLRMYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKARGSAGPGQGVFGRLRF 177

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E GVHRVQRVP TE++GR+HTSAA V VLPEAA++DVD+   D+RID  R+SG GGQ VN
Sbjct: 178 EGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAADVDVDVDPNDLRIDVFRSSGPGGQSVN 237

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PTG++V   +EKSQ QN+  AM++LR+RL    R++  +E +A R  Q+
Sbjct: 238 TTDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILRSRLLAAAREKAESEAAAARASQV 297

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            + DRSE+IRTYNF + RI+DHRIN   + LE VL G +D +++ L+ A QA  + +A
Sbjct: 298 RTVDRSEKIRTYNFPENRISDHRINYKAHNLEQVLDGDLDAVVDALIEADQAARMVAA 355


>gi|113954440|ref|YP_729638.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
 gi|119361628|sp|Q0ID34|RF1_SYNS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|113881791|gb|ABI46749.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
          Length = 364

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 222/354 (62%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++    + F  +E ++++        +L     E + + P++   +   + + E+    +
Sbjct: 9   RLEAASSSFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQAKS 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D+ + +LAQ E+  +++   +L   I   LLPKD  D++S +LEIRAG GG E
Sbjct: 69  LLKESRGDAAMEELAQQELQELDRHHADLIQRITLALLPKDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYER+++ R W V  +S+++ D GGYKE++ ++ G  VFS +KFE+GVHR
Sbjct: 129 ACLWAGDLARMYERFSSRRGWSVTPVSANEADLGGYKELILSVKGDAVFSELKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP+TE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPSTESQGRVHTSTATVAVMPEADPVEVQIDPRDLDISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RA+++LRA+LY+ +         + R+ Q+G+GDRS
Sbjct: 249 DLMHKPTGIRVFCTQERSQMQNRERALEILRAKLYERQLAEANASERSARRSQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN    R+TDHR+      L+ VL+G +DD+I+  +   Q   +   SE
Sbjct: 309 EKIRTYNAKDNRMTDHRLGRNFS-LDPVLEGQMDDVIDACIAEEQRGKLADLSE 361


>gi|109948016|ref|YP_665244.1| peptide chain release factor 1 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973223|sp|Q17VT1|RF1_HELAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109715237|emb|CAK00245.1| peptide chain release factor RF-1 [Helicobacter acinonychis str.
           Sheeba]
          Length = 352

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  ++   KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVINDIKKLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIKKSELETTIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  ++++ I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEISINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|119776010|ref|YP_928750.1| peptide chain release factor 2 [Shewanella amazonensis SB2B]
 gi|119768510|gb|ABM01081.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           amazonensis SB2B]
          Length = 364

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 170/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 27  DAKKERLEEVTRELESSDVWNNPERAQALGKERASLENVVKTIDTLDSGLEDVEGLLELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    D       A   E+ +   ++ +  +     D   C L+I++G+GG+EA 
Sbjct: 87  VEEEDEGTFEDAK-----AELDELEKSLEDLEFRRMFSGPQDPSDCYLDIQSGSGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +K E++  SD D  G K      +G   +  ++ E+GVHR+ 
Sbjct: 142 DWAEMVLRMYLRWGEAHDFKPELIEVSDGDVAGIKSATIKFTGEYAYGWLRTETGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 202 RKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPADLRIDVYRASGAGGQHVNRTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+LY++E ++   E+  + + K  IG G  
Sbjct: 262 ITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLYELELQKQNAEKQAAEDAKSDIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 320 -SQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIEASLK 361


>gi|237750909|ref|ZP_04581389.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879]
 gi|229373354|gb|EEO23745.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879]
          Length = 356

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 165/359 (45%), Positives = 240/359 (66%), Gaps = 9/359 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  +  R   +   +S    ++   KL   ++E +    I++K   Y +   +  
Sbjct: 1   MLVDRLKPIIERNDALAAMLSTEEVINDIAKLTALSKEKSESDEIVAKAKEYLKVLDDIT 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++     D E+ +LA+ E+  +E   + LE+EI  LL+PKD +D K+  LEIRAGT
Sbjct: 61  SNKALLE----DKELGELAKEELKELEIAQKNLEDEIKILLIPKDPNDKKNIYLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA +FVGDLF  Y RYA  ++WKVE++SSS+N  GGYKE++A + G G +SR+K+E 
Sbjct: 117 GGDEAGIFVGDLFSAYCRYADSKQWKVEIISSSENSVGGYKEMIALVKGDGAYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GR+HTSA TVA++PE   ++++I   D++ID  R+ G GGQ VNTT
Sbjct: 177 GTHRVQRVPKTESQGRIHTSAITVAIMPEVDSLEININPNDLKIDVFRSGGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI V+   EKSQH+N+ +A+K+L+ARLY+ E +    +   +RK Q+GS
Sbjct: 237 DSAVRITHIPTGISVSMQDEKSQHKNKDKALKILQARLYEAELEAQNAQNRESRKNQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYN+ Q R++DHRINLTLY LE ++  G +D +I+PL+   Q+  + +A+E
Sbjct: 297 GDRSERIRTYNYPQNRMSDHRINLTLYSLEEIMLSGDLDKVIDPLIAHAQSLALSNANE 355


>gi|217034576|ref|ZP_03439984.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
 gi|216942931|gb|EEC22416.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
          Length = 352

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSILEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|187251505|ref|YP_001875987.1| peptide chain release factor 1 [Elusimicrobium minutum Pei191]
 gi|186971665|gb|ACC98650.1| Peptide chain release factor [Elusimicrobium minutum Pei191]
          Length = 358

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 139/358 (38%), Positives = 213/358 (59%), Gaps = 5/358 (1%)

Query: 3   FLSHKQIC--DLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            L  +++        F  +E  MS      +   K ++ +A + PI+ K    +  ++  
Sbjct: 1   MLREQKMDISKYLEEFKTLEAEMSSGNMPSEELQKKSKRHAFLRPIVEKGLELEAAQKGI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   +I D  SD E+  +A  E+  +  +I  LE E+  L++P D +D KS  LE+R G
Sbjct: 61  KDAQEIIKD-GSDKEMSQMAAEEMETLNAQIPVLEAELRVLVIPPDPNDSKSIYLELRPG 119

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG E+++F  ++ R+Y+R+A  + WK E+L  +     G K     I G G +S ++ E
Sbjct: 120 AGGDESSIFAAEMLRVYQRFADAKGWKTELLEYTPTGLKGCKYASMFIKGDGAYSWLRDE 179

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG HRVQRVP TE SGRVHTS  TVA++PEA E+D+ I   DI ++T RA G+GGQ+VN 
Sbjct: 180 SGTHRVQRVPDTETSGRVHTSTITVAIMPEAEEVDIQINPADIEMETCRAGGAGGQNVNK 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
            ++AVR+ H PTG++V    E+SQ  NR++AM +LRA+LY +E ++   E    RK Q+G
Sbjct: 240 VETAVRLIHKPTGVVVSCREERSQGANRIKAMNMLRAKLYQMEEEKRNKEIYDTRKSQVG 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +GDRSE+IRTYNF Q R+TDHR   + + +  +++G I++I+N L T      I +  
Sbjct: 300 TGDRSEKIRTYNFPQSRVTDHRTEKSYHNITEIMEGQIEEILNDLRTLRLEAKIKNLE 357


>gi|319760481|ref|YP_004124419.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039195|gb|ADV33745.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 360

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 156/359 (43%), Positives = 237/359 (66%), Gaps = 9/359 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  L+ RF +++  +     +     +  +++EYA ++ I++    +   ++E  
Sbjct: 5   IIINKLTILQERFYKLKQLIEHPNHIQNNKDFHSISKEYAHLAHIVTYFEQWLNIQKEIL 64

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++    +D ++ DLA  E+  +      LE +I  LLLP D +D   C +E+RAGT
Sbjct: 65  HTKEIL----TDIDLHDLALDELKKLNIIENNLEKKIKILLLPTDPNDKYGCFIELRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+F G+LFRMY RYA  ++W +E++ ++  + GGYKEI+A IS  G ++++KFES
Sbjct: 121 GGKEAAIFSGELFRMYTRYAETQRWNIEIIHATYGEYGGYKEIIAKISCNGAYNQLKFES 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNT 239
           G HRVQRVP TE+ GR+HTS  TVAV+P+  +I   +I   D+RIDT R+SG+GGQHVNT
Sbjct: 181 GGHRVQRVPYTESQGRIHTSTCTVAVIPKIPDIKLPNINPNDLRIDTFRSSGAGGQHVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSA+RITHIP+G+ V    E+SQH+N+ +A+ +LR+RLY +  KR   E S  R+  IG
Sbjct: 241 TDSAIRITHIPSGLSVECQDERSQHKNKSKALSILRSRLYAMNIKRRKIEESNFRRNLIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SGDRS+RIRTYNF QGR+TDHRI+ T YKL  V+ G +  +I P++  +++K+I   ++
Sbjct: 301 SGDRSDRIRTYNFQQGRVTDHRIDFTSYKLSDVMDGALGILIKPIICKYRSKLIDQLTQ 359


>gi|108562503|ref|YP_626819.1| peptide chain release factor 1 [Helicobacter pylori HPAG1]
 gi|119361549|sp|Q1CV77|RF1_HELPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|107836276|gb|ABF84145.1| peptide chain release factor RF-1 [Helicobacter pylori HPAG1]
          Length = 352

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 246/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG+EA +FVGDLF+ Y RYA L+KW+VE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGNEAGIFVGDLFKAYCRYADLKKWRVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 576]
 gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813009|ref|YP_002897460.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei MSHR346]
 gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei GB8 horse 4]
 gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106b]
 gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei PRL-20]
 gi|284159918|ref|YP_001059616.2| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 668]
 gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 576]
 gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei MSHR346]
 gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei GB8 horse 4]
 gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106b]
 gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei PRL-20]
 gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei NCTC 10229]
 gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei NCTC 10247]
 gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 668]
          Length = 367

 Score =  247 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 183/344 (53%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R AE+  ++ +    +       L  E  ++  +++ ++  D   ++ QDL  + 
Sbjct: 30  DVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTALDNDLRDAQDLFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +         +   ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  HEEGDEETLVATE-----SDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     +SG   +  ++ E+G+HR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RL++ E ++   E+    + K  +G G  
Sbjct: 265 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +   + VL G +DD I+  L  
Sbjct: 323 -HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|195941927|ref|ZP_03087309.1| peptide chain release factor 1 [Borrelia burgdorferi 80a]
          Length = 357

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 253/355 (71%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   IE ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MLLEKLNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  +LE++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DTKTIL-EKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLY+LE  +QG +D +++PL+ A Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYRLEEFMQGELDPLLDPLMIALQEQELKS 354


>gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Vibrio angustum S14]
 gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum
           S14]
          Length = 353

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 179/343 (52%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +       D    L +E A++  ++  I + DQ  ++ + L  + 
Sbjct: 16  DAKKERLEEVNAELEQPDVWNEPDRAQALGKERASLEAVVETIDLLDQGVEDVEGLLELA 75

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++          E+     ++ +  +     D   C L+++AG+GG+EA 
Sbjct: 76  VEENDQETFDEIEPE-----LAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTEAQ 130

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+A  + +K E++  SD D  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 131 DWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHRLV 190

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  V PE  +   +DI   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 191 RKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVR 250

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+N+ +AMK L+A+L++ E ++   E+  S + K  IG G  
Sbjct: 251 ITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG-- 308

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 309 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
 gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
          Length = 353

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +       D    L +E +++  ++  I + DQ  ++ + L  + 
Sbjct: 16  DAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAVVETIDLLDQGVEDVEGLLELA 75

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++          E+     ++ +  +     D   C L+++AG+GG+EA 
Sbjct: 76  VEENDQETFDEIEPE-----LAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTEAQ 130

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+A  + +K E++  SD D  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 131 DWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHRLV 190

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  V PE  +   +DI   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 191 RKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVR 250

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+N+ +AMK L+A+L++ E ++   E+  S + K  IG G  
Sbjct: 251 ITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG-- 308

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 309 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|330469860|ref|YP_004407603.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032]
 gi|328812831|gb|AEB47003.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032]
          Length = 362

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 157/365 (43%), Positives = 214/365 (58%), Gaps = 18/365 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +S +++  L + +AE+E R+++           ++   YA + P         +   E +
Sbjct: 1   MSSERLARLLDEYAELEKRLADPAIHADQGTARRVGRRYAELVP-------LHKAAAELE 53

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
                +      +        E   +  E+  LE  +  LL+P+D  D K  I+EI+AG 
Sbjct: 54  QARADLAAARELAAEDPSFAAEAETLAAELPALEERLAELLIPRDPHDAKDVIVEIKAGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVF 173
           GG E+ALF GDL RMY RYA  R W  EV+ + D+D GG K++   I          GV+
Sbjct: 114 GGEESALFAGDLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAIKTKGVPEGGNGVW 173

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           SR+K+E GVHRVQRVP TE+ GR+HTSAA V VLPEA E+DV I   ++RID  R+SG G
Sbjct: 174 SRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEEVDVTIDPNELRIDVFRSSGPG 233

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI+V   +EKSQ QNR +AM++LRARL    +++     S  
Sbjct: 234 GQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARLLAAAQEQADAAASDA 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           RK Q+ + DRSERIRTYNF Q RITDHRI  T Y L+  L G +D +++ L  A +A  +
Sbjct: 294 RKAQVRTVDRSERIRTYNFPQNRITDHRIGYTAYNLDLALAGELDGVLDALSEADRAARL 353

Query: 353 GSASE 357
               E
Sbjct: 354 AGDPE 358


>gi|261838950|gb|ACX98715.1| peptide chain release factor RF-1 [Helicobacter pylori 52]
          Length = 352

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISITSKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V +   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSLNPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|207091639|ref|ZP_03239426.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 352

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|308062940|gb|ADO04827.1| peptide chain release factor 1 [Helicobacter pylori Sat464]
          Length = 352

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYNELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|15644707|ref|NP_206877.1| peptide chain release factor 1 [Helicobacter pylori 26695]
 gi|2500136|sp|P55998|RF1_HELPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2313158|gb|AAD07148.1| peptide chain release factor RF-1 (prfA) [Helicobacter pylori
           26695]
          Length = 352

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|328944392|ref|ZP_08241854.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829]
 gi|327490976|gb|EGF22753.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829]
          Length = 354

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 163/357 (45%), Positives = 231/357 (64%), Gaps = 10/357 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L   +AE+E +M +   V     Y ++ +E+A    ++++   Y Q   + + 
Sbjct: 1   MRDKLEKLIAAYAELEKKMIDPAIVADPKEYARIAKEHARQGDLVARAREYLQALDDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ D ++D   R++ Q ++ A E+++  LE+EI  +L+P D +D+K  I+EIRAG G
Sbjct: 61  AKEMLHDADADE--REMLQEDIAANEEKLPALEDEIKIMLIPGDPNDEKDTIVEIRAGVG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDL++MYER+A  + WKVE+LSSS ++ GG+K I   + G  V+S MK+ESG
Sbjct: 119 GDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGFKTIEFKMLGEKVYSVMKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+ TS ATVAVLPEA EID+ I   D+RIDT  ASG GGQ VNTT 
Sbjct: 179 VHRVQRVPKTESQGRIQTSTATVAVLPEADEIDIQIDPTDLRIDTYCASGPGGQCVNTTY 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY++E ++   E+ A R  QIG G
Sbjct: 239 SAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQEEQGAARLSQIGHG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           +RSE+IRTYN  Q R+TDHRI     Y    VL G  +  II  L  A +A+ +  A
Sbjct: 299 NRSEKIRTYNQPQDRVTDHRIGFNATYN--GVLLGDTLISIIEALAAAERAEKLAKA 353


>gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
 gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344]
 gi|226830773|ref|YP_001066897.2| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 1106a]
 gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH]
 gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU]
 gi|81604734|sp|Q62J00|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|81607820|sp|Q63SP0|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229576668|sp|A3NX26|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
 gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei ATCC 23344]
 gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH]
 gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU]
 gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106a]
          Length = 367

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 183/344 (53%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R AE+  ++ +    +       L  E  ++  +++ ++  D   ++ QDL  + 
Sbjct: 30  DVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTALDNDLRDAQDLFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +         +   ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  HEEGDEETLVATE-----SDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     +SG   +  ++ E+G+HR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RL++ E ++   E+    + K  +G G  
Sbjct: 265 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +   + VL G +DD I+  L  
Sbjct: 323 -HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|318042535|ref|ZP_07974491.1| peptide chain release factor 1 [Synechococcus sp. CB0101]
          Length = 365

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 151/355 (42%), Positives = 223/355 (62%), Gaps = 5/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++   +  F  +E ++++        +L     E A + P++         + +EQ   
Sbjct: 8   ERLDAARTTFDTLERQLADPDVAANPAQLEPIARERARLEPLVMGYDELQTLQGQEQQAR 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D ++  LAQ E+  +   I  LE ++   LLP+D  D++S +LEIRAG GG 
Sbjct: 68  ELLRESRGDLDLEALAQEELAELATRISALEEQLTLALLPRDPRDERSVMLEIRAGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAAL+ GDL RMYERYA    WKV+ +S+S+ + GGYKE++  I G GVFS++KFE+GVH
Sbjct: 128 EAALWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIKGDGVFSQLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPGDLEISTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RA+++LRA+LY+ E      E  + R  Q+G+GDR
Sbjct: 248 VDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELATANAEERSARLAQVGTGDR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYN+   R TDHR+      LE VLQG + ++I   ++A Q + +   +E
Sbjct: 308 SEKIRTYNYKDNRTTDHRLGRNFS-LEPVLQGQLAELIGACVSADQRRQLEELAE 361


>gi|308061372|gb|ADO03260.1| peptide chain release factor 1 [Helicobacter pylori Cuz20]
          Length = 352

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|225159115|ref|ZP_03725422.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2]
 gi|224802321|gb|EEG20586.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2]
          Length = 373

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 154/355 (43%), Positives = 223/355 (62%), Gaps = 4/355 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEE 59
             S   I   + R  E++ +M      +        T E+  ++ +++  + + +   E 
Sbjct: 1   MQSLPDISLFQRRADELDAQMRSPTFYNDARAAAAVTREHQQVTQLLADHAAHRKTLAEI 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +   +I D ++D ++R+LA+ E+  +E     L   +   ++P +  D +  +LEIRAG
Sbjct: 61  AEAQALIKDPSADPDLRELAEAELPELEARRERLFRTVLAGMIPPEPTDSRDTVLEIRAG 120

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  +L RMY RYA  R W VE   SS+++ GG++E+   I G+ V+ ++KFE
Sbjct: 121 TGGEEAALFAAELARMYHRYAEDRGWTVEPTGSSESERGGFREVSFIIRGQDVYKQLKFE 180

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TEA+GR+HTS  TVAVLPEA E+D+ I  +D+ I   RASG GGQ VNT
Sbjct: 181 SGVHRVQRVPLTEANGRIHTSTVTVAVLPEAQEVDIRIDPQDLEITVQRASGPGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRI H PTG++V  +  +SQ +N+  AM VLRARL   ++   A + +A R+ QIG
Sbjct: 241 TDSAVRIVHKPTGMIVYCADGRSQQKNKASAMSVLRARLLQRKQDEEAAKYAAQRRGQIG 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +GDRSERIRTYNF Q R+TDHRI LTLY L  V++G +++++ PL  A   + + 
Sbjct: 301 TGDRSERIRTYNFPQNRLTDHRIGLTLYSLTQVMEGALNEVVQPLQKAEFEEKLA 355


>gi|34557214|ref|NP_907029.1| peptide chain release factor 1 [Wolinella succinogenes DSM 1740]
 gi|46576699|sp|Q7M9M4|RF1_WOLSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34482930|emb|CAE09929.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Wolinella succinogenes]
          Length = 355

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 175/359 (48%), Positives = 247/359 (68%), Gaps = 9/359 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++     RF EI   +     +       +L++E +A+  ++ K   Y Q  +  Q
Sbjct: 1   MLISKLTPFIERFEEITRLLGTMEVISDIKRMTELSKEQSALEALVLKAKEYLQTHRSIQ 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   +      D E+ DLA+ E   +E+ +  LE+EI  LL+PKD +DDK+  LEIRAGT
Sbjct: 61  ENRALFE----DKELGDLAKEENKLLEESLESLESEIKLLLIPKDPNDDKNIYLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA +FVGDLF+ Y RYA L+ WKVE++SSS+N  GGYKE++A I G GV+SR+K+E 
Sbjct: 117 GGDEAGIFVGDLFKSYCRYADLKGWKVEIISSSENSVGGYKEVIALIKGNGVYSRLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GR+HTSA TVA++PE  +++V+I   D++ID  R+ G GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVNINPNDLKIDVFRSGGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI V+   EKSQH+N+ +A+K+L+ARLY+ E +   +E SA RKLQ+GS
Sbjct: 237 DSAVRITHLPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAKLSENSAARKLQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYN+ Q R+TDHRI LTLY LE ++  G  D +++P++  +QA+M+  + +
Sbjct: 297 GDRSERIRTYNYPQNRLTDHRIGLTLYSLEEIMLSGNFDQVVDPIVAHYQAEMMKESED 355


>gi|33241132|ref|NP_876074.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|81663962|sp|Q7V9Z0|RF1_PROMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33238662|gb|AAQ00727.1| Protein chain release factor A [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 365

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 143/353 (40%), Positives = 220/353 (62%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +EL++++        KL     E A + P++           E ++   
Sbjct: 9   RLETASATFNNLELQLADPDVASDPKKLETIARERARLEPLVLDYKELQAIDLEYKEAKE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    SD E+  LAQ E++ +E+  ++L N +   LLPKD  D++S +LEIRAG GG E
Sbjct: 69  LLRQSKSDKEMEALAQEELIRLEELEKDLVNRLTLALLPKDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V+ +S+++ D GG++E++ ++ G+ VFS++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGLKVGWVVKAMSATEADLGGFRELIISVKGKAVFSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V +   D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVKLEPTDLEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RA+++LRA+L + E +    +  + R  Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREIEEANAKERSARLAQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R TDHR+ +  + LE VL+G +DD+I   +   Q   +    
Sbjct: 309 EKIRTYNYKDNRTTDHRLGVN-FPLETVLEGELDDLIGACIAEEQRLKMEKLG 360


>gi|162447071|ref|YP_001620203.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A]
 gi|226739094|sp|A9NEP7|RF1_ACHLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161985178|gb|ABX80827.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A]
          Length = 354

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 220/352 (62%), Gaps = 3/352 (0%)

Query: 7   KQICDLKNRFAEIELRMSES-PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +++  ++  +  ++ +++     V    KL +E  ++   +     Y   K++ +D    
Sbjct: 3   ERLEVMRKTYYALQEKLASGISDVKEITKLMKELKSLEDAVVAYEKYLSLKEQLKD-LEE 61

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  ++S + ++A+ E  ++E +I  LE  +  LLLPKD DDDK+ I+EI+   GG E 
Sbjct: 62  LLELETESSVLEMAKAEEKSLESDIENLEESLRILLLPKDPDDDKNVIIEIKGAAGGDEG 121

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +F GDLF+MY +YA    WKV +++++    GG+  I   ISG   FS +K ESGVHRV
Sbjct: 122 NIFAGDLFKMYSKYAESMGWKVTLVNTTPGSSGGFAGIEFIISGENAFSYLKHESGVHRV 181

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE+ GR+HTS A V  LPE  +I+ D+  EDIR DT  +SG+GGQ VNTT SAVR
Sbjct: 182 QRVPETESQGRIHTSTAVVLALPEQEDIEYDVKWEDIRFDTYNSSGAGGQSVNTTYSAVR 241

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPT ++V +  E+SQH N+ RA K+L  R+YD  ++    +   +RK  IG G+RSE
Sbjct: 242 LTHIPTNVVVTSQEERSQHANKDRAYKLLVTRIYDKIQQEQLEKEGESRKALIGRGNRSE 301

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +IRTYN+ Q R+TDHRI LT+ +L+ +++G ID II PL+   Q + +   S
Sbjct: 302 KIRTYNYPQNRVTDHRIGLTINRLDAIMEGRIDLIIEPLINEIQKEALEGQS 353


>gi|317179883|dbj|BAJ57669.1| peptide chain release factor 1 [Helicobacter pylori F32]
          Length = 352

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVEV+SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|261837535|gb|ACX97301.1| peptide chain release factor RF-1 [Helicobacter pylori 51]
          Length = 352

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLFSILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|319943696|ref|ZP_08017977.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
 gi|319742929|gb|EFV95335.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            + KNR  E+   +      +      +L +E  A+  ++  I        + +DL+ + 
Sbjct: 22  DEKKNRLTEVNSALEAPDIWNDAAAALELGKEKRALDNVVGTIEQLTGSLSDTRDLYEMA 81

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N D+ + +L +         I +    + +  +  +  D   C LEI+AG GG+EA 
Sbjct: 82  VAENDDATLEELERE-----SLGIEKGVEGLEFRRMFSNPADPGPCFLEIQAGAGGTEAC 136

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   R +   +L  S+ D  G K     + G   +  ++ E+G+HR+ 
Sbjct: 137 DWAAMLLRQYLRYCERRGFTTTLLEESEGDVAGIKGATLKVEGEYAYGYLRTETGIHRLV 196

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A+V V PE  +  +VDI   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 197 RKSPFDSSGGRHTSFASVYVYPEVDDSIEVDINPADLRIDVYRASGAGGQHVNKTESAVR 256

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+NR  AMK+LRARL+++E ++   E+      K  IG G  
Sbjct: 257 ITHLPTNTVVQCQNDRSQHRNRDEAMKMLRARLFELELRKRQAEQDKVEASKTDIGWG-- 314

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N      + VL G +DD I   L  
Sbjct: 315 -HQIRSYVLDQSRIKDLRTNFETSNTKAVLDGDLDDFIAESLKQ 357


>gi|317010358|gb|ADU84105.1| peptide chain release factor 1 [Helicobacter pylori SouthAfrica7]
          Length = 352

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 248/354 (70%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V+   KL   ++E ++I  I +    Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVVNDIKKLTELSKEQSSIEEISTASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+ A+E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKALEIKKSELEATIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSER+RTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERVRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|297821206|ref|XP_002878486.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324324|gb|EFH54745.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 128/354 (36%), Positives = 220/354 (62%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++  + E+ +++++   V     Y KL +  + +  +++    +   +++  +   
Sbjct: 60  KMESVEKTWKELSVKLADPAVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKV 119

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D ++ ++   E+ ++  EI  LE ++  LLLP D  D ++ +LE+RAGTGG E
Sbjct: 120 LAKEAGDDEDMAEMIGSEINSLSIEIEGLEKQLKVLLLPSDPLDARNILLEVRAGTGGDE 179

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA++ GDL RMY+RY+    WK  ++S S+ + GGYK  V  I G  V+S++K+ESGVHR
Sbjct: 180 AAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHR 239

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTS ATVA++PEA E++V I  +DI + + R+ G+GGQ+VN  ++A+
Sbjct: 240 VQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAI 299

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H P+GI +  + E++Q +N+ RA ++LRA+LY+++ +    +    RK Q+G+G RS
Sbjct: 300 DLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARS 359

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R+TDHR+ +  + L   L G ++D +       Q +++   SE
Sbjct: 360 EKIRTYNYKDSRVTDHRLKMN-FALTSFLDGALEDAVQACAALEQKELMEELSE 412


>gi|253687049|ref|YP_003016239.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585229|sp|C6D8Z5|RF2_PECCP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|251753627|gb|ACT11703.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 365

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQLTQGLEDVAGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    D            +     ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEEDDEDTFNDTTVE-----LDALENKLGQLEFRRMFSGQYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+    +++SQH+N+ +AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 263 ITHMPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|317008750|gb|ADU79330.1| peptide chain release factor 1 [Helicobacter pylori India7]
          Length = 352

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSVLAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|116326889|ref|YP_796609.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116329879|ref|YP_799597.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122282347|sp|Q04W81|RF1_LEPBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122285261|sp|Q056R9|RF1_LEPBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116119633|gb|ABJ77676.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123568|gb|ABJ74839.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 354

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 147/351 (41%), Positives = 223/351 (63%), Gaps = 2/351 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
              ++  ++ ++  I   ++ +    +   L +E + ++P+  K+  Y +  ++++D   
Sbjct: 1   MIDRLEKIQEKYLRISEELNSAKDPSSLKSLYKERSRLTPLYLKVEEYLKIYKDKKDAEE 60

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I     D E+  + + E+    K++ ELE E+  LLL  D +  K+ ++EIRAGTGG E
Sbjct: 61  LIP-SEKDEEMHSMLKEEIRRASKKLEELEKELEILLLTPDPNSGKNILVEIRAGTGGEE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LFV DLFRMY ++A  +K K E++ S+    GG KEI+  +     +   KFE G HR
Sbjct: 120 AGLFVADLFRMYSKFADKQKIKSEIIDSAPTGIGGLKEIIFALEDERAYDLFKFEGGTHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P+TE+ GR+HTSA TVAVLPEA E +++I   D+RID  R+SG+GGQHVNTTDSAV
Sbjct: 180 VQRIPSTESGGRIHTSAVTVAVLPEADEEEIEINENDLRIDVYRSSGAGGQHVNTTDSAV 239

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTG++V    EKSQH+N+ +A+++L AR+ + + +       A +K  IGSGDRS
Sbjct: 240 RITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQTEDKKQASDAIKKQMIGSGDRS 299

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ER+RTYNF QGR TDHRI  T + L  +++G ++++I  L    +A+ I  
Sbjct: 300 ERVRTYNFPQGRCTDHRIGFTSHNLSAIMEGDLEELIGALTEEDRARKISE 350


>gi|218245097|ref|YP_002370468.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
 gi|226739099|sp|B7K205|RF1_CYAP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218165575|gb|ACK64312.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
          Length = 370

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 143/354 (40%), Positives = 229/354 (64%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  +   + E+  R+++     + D   ++    +++   +     + Q ++E     
Sbjct: 8   EKLQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQEELIGAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+R++A +EV  + +++ ELE ++  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QILKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  +KW V+++S S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  +++V I  +DI I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDAKDIEITTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + + P GI +  + E+SQ QNR RAM++LRA+LYD++ +   +  S+ RK Q+G+G R
Sbjct: 248 VDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYDLKLREQQDAVSSMRKSQVGTGAR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+      L   L+G I++II   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLGQNFS-LAGTLEGDIEEIIQSCISQDQQERLEELA 360


>gi|255326261|ref|ZP_05367347.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
 gi|283458332|ref|YP_003362953.1| protein chain release factor A [Rothia mucilaginosa DY-18]
 gi|255296715|gb|EET76046.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
 gi|283134368|dbj|BAI65133.1| protein chain release factor A [Rothia mucilaginosa DY-18]
          Length = 360

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 144/362 (39%), Positives = 213/362 (58%), Gaps = 18/362 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + I  L +  A+++ ++++           ++   YA ++ I++  + Y   K + +   
Sbjct: 3   ESIQVLLDEHADLQNQLADPAVQANQGKARRVGRRYAELTGIVTAYNKYTSLKDDLEAAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D +           +E    +L      LL+P+D DD ++ ILE++AG GG 
Sbjct: 63  EMADE---DPDFAAEIPGLEEELEVAQEKL----RRLLIPRDPDDGRNVILEVKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           EAALF GDL RMY RYA  + WK E++SS+  D GGYK+    I         GV++ +K
Sbjct: 116 EAALFAGDLLRMYMRYAEHKGWKTEIISSTSTDVGGYKDAQIAIKGSSNEPAEGVWAHLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
           +E GVHRVQRVPATE+ GR+HTSAA V V PE     +++I   D++ID  R+SG GGQ 
Sbjct: 176 YEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEIEINQNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR  AM+VLRARL   +++++  E +A+R  
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRAS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           Q+ + DRSERIRTYNF + RI DHR     Y L+ VL G ++ ++   +   +A  +   
Sbjct: 296 QVRTMDRSERIRTYNFPENRIADHRTGYKAYNLDAVLNGDLEPVVQSAIEMDEAHRLAQV 355

Query: 356 SE 357
            +
Sbjct: 356 GQ 357


>gi|315586075|gb|ADU40456.1| peptide chain release factor RF1 [Helicobacter pylori 35A]
          Length = 352

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAQKLSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  ++++ I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEISINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|225552361|ref|ZP_03773301.1| peptide chain release factor 1 [Borrelia sp. SV1]
 gi|225371359|gb|EEH00789.1| peptide chain release factor 1 [Borrelia sp. SV1]
          Length = 357

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 253/355 (71%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   IE ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MLLEKLNSATSKIKLIEEKLQDINLIKDQKKYSKIVKEYTYLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  +LE++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DTKTIL-EKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL+ A Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFIQGELDPLLDPLMIALQEQELKS 354


>gi|317181378|dbj|BAJ59162.1| peptide chain release factor 1 [Helicobacter pylori F57]
 gi|332672916|gb|AEE69733.1| peptide chain release factor RF1 [Helicobacter pylori 83]
          Length = 352

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLYSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|317176897|dbj|BAJ54686.1| peptide chain release factor 1 [Helicobacter pylori F16]
          Length = 352

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 244/354 (68%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E + I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSFIEEISITSKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|283768251|ref|ZP_06341164.1| peptide chain release factor 1 [Bulleidia extructa W1219]
 gi|283105128|gb|EFC06499.1| peptide chain release factor 1 [Bulleidia extructa W1219]
          Length = 358

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 144/344 (41%), Positives = 220/344 (63%), Gaps = 6/344 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +++  +  R+  I   + +           KL++E A+++  +          +  +  
Sbjct: 5   REKLIGMDQRYQTITNDLMDEKVFSNPALLTKLSKEQASLTQAVEAWHKLKALDERIEQA 64

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           + ++ +  SD E++++A++E+        EL   I +LL+PKD DDD   I+EIR G GG
Sbjct: 65  NEMMKE--SDVELKEIAKMELEECLPVQEELLEHIQHLLIPKDPDDDHDVIMEIRGGAGG 122

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            E  +F GDL+RMY RYA  + WKV+V+ +S ++ GG+ +++ +I G  V+  +K+ESGV
Sbjct: 123 DEGNIFAGDLYRMYTRYAESKGWKVQVMETSISEAGGFSQVIFSIKGNEVYRDLKWESGV 182

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GRVHTS ATV   PEA E D++I   D+ I+T RASG+GGQH+N TDS
Sbjct: 183 HRVQRVPKTESQGRVHTSTATVLCQPEAEEADIEIDPADLTIETHRASGAGGQHINKTDS 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRI H+PTGI V     +SQ +NR  AM+++RAR+Y+  +++   E  A R+ +IG+GD
Sbjct: 243 AVRIVHVPTGITVNCQEGRSQIENRETAMRLIRARVYEEIKRQRDEEAGAARRAKIGTGD 302

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RSE+IRTYN+ Q R+TDHRI LT+ +L+ +++G +D II  L  
Sbjct: 303 RSEKIRTYNYPQNRVTDHRIGLTITQLDRIMEGKLDGIIAGLQA 346


>gi|188526883|ref|YP_001909570.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
 gi|238691882|sp|B2URQ8|RF1_HELPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188143123|gb|ACD47540.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
          Length = 352

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINSSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|257058120|ref|YP_003136008.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
 gi|256588286|gb|ACU99172.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
          Length = 370

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 229/354 (64%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  +   + E+  R+++     + D   ++    +++   +     + Q ++E     
Sbjct: 8   EKLQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQEELIGAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D E+R++A +EV  + +++ ELE ++  LLLP+D +DDK+ +LEIRAGTGG 
Sbjct: 68  QILKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEIRAGTGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL RMY RYA  +KW V+++S S  D GG+KE +  I G  V+S++KFE+GVH
Sbjct: 128 EASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TEA GRVHTS ATVA++PE  +++V I  +DI I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDAKDIEITTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + + P GI +  + E+SQ QNR RAM++LRA+LY+++ +   +  S+ RK Q+G+G R
Sbjct: 248 VDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYELKLREQQDAVSSMRKSQVGTGAR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R+TDHR+      L   L+G I++II   ++  Q + +   +
Sbjct: 308 SEKIRTYNYKDNRVTDHRLGQNFS-LAGTLEGDIEEIIQSCISQDQQERLEELA 360


>gi|94309981|ref|YP_583191.1| peptide chain release factor 2 [Cupriavidus metallidurans CH34]
 gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34]
          Length = 357

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               NR  E+   + +    +   +   L +E  A+  ++  +           +L  + 
Sbjct: 20  DVKVNRLDEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVQVLGKLTDDLNGTDELFELA 79

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  +  +      A       L  ++ +  +     D  +  ++I+AG GG+EA 
Sbjct: 80  REEGDDETLESIE-----ADVSGFEALVADMEFRRMFSGEMDQANAFIDIQAGAGGTEAC 134

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +Y   + +K EVL  S+ D  G K     + G   F  ++ E+GVHR+ 
Sbjct: 135 DWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKVEGEYAFGYLRTETGVHRLV 194

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE     +V++   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 195 RKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVR 254

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RLY+ E ++   E       K  +G G  
Sbjct: 255 ITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWG-- 312

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 313 -HQIRSYVLDQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355


>gi|78780006|ref|YP_398118.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9312]
 gi|119361576|sp|Q318L3|RF1_PROM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78713505|gb|ABB50682.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
           marinus str. MIT 9312]
          Length = 364

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 227/353 (64%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E+++++    +   KL     E + + P++   +      +E +D   
Sbjct: 9   RLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKN 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ ++ +D E+  L   E++ +E+   +L  +    LLPKD  D++S +LEIRAG GGSE
Sbjct: 69  LLKENRNDKEMESLINEELINLEECKNQLIQKTTIALLPKDPRDERSVMLEIRAGAGGSE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V+ +S+S++D GG+KE+V ++ G  V+S++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ + T R+ G+GGQ+VN  ++A+
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ K    +  + R  Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYNF   R TDHR+  + + LE +L G +D++I+  +   Q +M+   +
Sbjct: 309 EKIRTYNFKDNRTTDHRLG-SNFSLEPILAGQLDEVIDACIAQEQKRMMEDFN 360


>gi|51598456|ref|YP_072644.1| peptide chain release factor 1 [Borrelia garinii PBi]
 gi|61214604|sp|Q662G9|RF1_BORGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51573027|gb|AAU07052.1| peptide chain release factor 1 [Borrelia garinii PBi]
          Length = 357

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 250/355 (70%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   IE ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MFLEKLNSATSKIKLIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  +LE++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DNKTIL-EKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEIV  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL    Q +   S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDPLLDPLTIELQEQKFKS 354


>gi|317968845|ref|ZP_07970235.1| peptide chain release factor 1 [Synechococcus sp. CB0205]
          Length = 367

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 148/356 (41%), Positives = 226/356 (63%), Gaps = 5/356 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDL 62
            +++   +  F  +E ++++        +L     E A + P++       Q +++EQ+ 
Sbjct: 7   RERLETARTTFETLERQLADPDVAANPAQLEPIARERARLEPLVLGYDQLCQWRKQEQEA 66

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ +   D E+  LAQ E+  +  +I  +E ++   LLP+D  D++S +LEIRAG GG
Sbjct: 67  RQLLKESRGDQEMEALAQEELSGLATQIAAMEEQLTLALLPRDPRDERSVMLEIRAGAGG 126

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAA++ GDL RMYERYA    WKV+ +S+S+ + GGYKE++  I G  VFS++K+E+GV
Sbjct: 127 DEAAIWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIQGDSVFSQLKYEAGV 186

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++
Sbjct: 187 HRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPTDLEISTARSGGAGGQNVNKVET 246

Query: 243 AVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AV + H PTGI +  + E+SQ QNR RA+++LRA+LY+ E      +  + R  Q+GSGD
Sbjct: 247 AVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELAEANAKERSARLAQVGSGD 306

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RSE+IRTYN+   R TDHR+      LE VLQG + ++I   ++A Q + +   ++
Sbjct: 307 RSEKIRTYNYKDNRTTDHRLGRNFS-LEPVLQGQLAELIGACVSADQRRQLEELAD 361


>gi|317179532|dbj|BAJ57320.1| peptide chain release factor 1 [Helicobacter pylori F30]
          Length = 352

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLFSILKRYDELTALLSSTEVISDIKKLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+S++KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSKLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|227498082|ref|ZP_03928255.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM
           15434]
 gi|226832520|gb|EEH64903.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM
           15434]
          Length = 366

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 143/358 (39%), Positives = 201/358 (56%), Gaps = 19/358 (5%)

Query: 12  LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L   +  IE  M++           +L   YA +  ++S    +   + +  D   +   
Sbjct: 15  LLEEYFGIEREMADPAISSDPGAMRRLGRRYAELGRVVSAYRAWQAAQADYDDAVELA-- 72

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D +          A E     L      +L+P+D DD +  I+E++AG GG E+ALF
Sbjct: 73  -EGDPDFAAEVPGLQAAAETATEHL----REVLVPRDPDDARDVIIEVKAGEGGEESALF 127

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESG 181
             DL RMY RYA    W VEVL ++D+D GGYK++   +          GV++ +K+E G
Sbjct: 128 ASDLARMYTRYAERMGWAVEVLDATDSDLGGYKDVRLAVKARSAVEPQDGVWAHLKYEGG 187

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTT 240
           VHRVQRVP TE+ GR+HTSAA V V+PE  +    +I   D+RID  R+SG GGQ VNTT
Sbjct: 188 VHRVQRVPVTESQGRIHTSAAGVLVMPEVDDPGELEIDPNDLRIDVFRSSGPGGQSVNTT 247

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V+  +EKSQ QN+  A++VLRARL      + A E +  R+ Q+ +
Sbjct: 248 DSAVRITHLPTGIVVSMQNEKSQLQNKEAALRVLRARLLAERAAQAAAEEAEARRSQVRT 307

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            DRSERIRTYNF + RITDHR     Y L  VL G +  +I+  +   +A+ + +  E
Sbjct: 308 VDRSERIRTYNFPENRITDHRTGYKAYNLSTVLDGDLGPVIDSAIAMDEAERLAAIGE 365


>gi|229818480|ref|ZP_04448761.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM
           20098]
 gi|229784350|gb|EEP20464.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM
           20098]
          Length = 362

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 203/353 (57%), Gaps = 20/353 (5%)

Query: 14  NRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  +E +M+    V   +   KL   +A +  I++    Y   K + +    +  +  
Sbjct: 14  KEYQSLEEQMASPEVVTDPNKMRKLGRRHAELGSIVTAYKAYLAVKNDLEAAREMASEDP 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
                      E   +E E+ ++E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  D-------FAAEAKRLESELPDVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V V S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 127 DLLRMYTRYAEKRGWTVSVQSENTTELGGVKDVQVAIRAKGTPAPEDGVWASLKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQRVP TE+ GR+ TSAA V V PE      ++DI  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRVPVTESQGRIQTSAAGVIVFPEADDDNDEIDIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLA 359


>gi|303232564|ref|ZP_07319250.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4]
 gi|302481351|gb|EFL44425.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4]
          Length = 354

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 160/356 (44%), Positives = 229/356 (64%), Gaps = 8/356 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L   +AE+E +M +   V     Y ++ +E+A  S +++    Y     + + 
Sbjct: 1   MRDKLEKLIAAYAELEKKMVDPAVVADQKEYTRIAKEHAHQSELVALAKEYIAALDDIEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++ + +SD   R++ Q ++ A E+++  LE++I  +L+P D +D+K  I+EIRA  G
Sbjct: 61  AKEMLHEASSDE--REMLQADIAANEEKLPALEDDIKIMLIPGDPNDEKDTIVEIRAAAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAA+F GDL++MYER+A  + WK+EVLSSS ++ GG+K I   + G  V+S MK+ESG
Sbjct: 119 GDEAAIFAGDLYKMYERFADSKHWKIEVLSSSPSEAGGFKTIEFKMLGDKVYSVMKYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+ TS ATVAVLPEA EIDV I   D+RIDT  ASG GGQ VNTT 
Sbjct: 179 VHRVQRVPKTESQGRIQTSTATVAVLPEADEIDVQIDPTDLRIDTYCASGPGGQCVNTTY 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY++E ++   E+ A R  QIG G
Sbjct: 239 SAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQAEQGAERLSQIGRG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           +RSE+IRTYN  Q R+TDHRI         VL G  + ++I  L  A +A+ +  A
Sbjct: 299 NRSEKIRTYNQPQDRVTDHRIGFNSTY-NGVLLGDNLINVIEALAAAERAEKLARA 353


>gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae]
          Length = 357

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 150/360 (41%), Positives = 202/360 (56%), Gaps = 21/360 (5%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I  L    AE+EL +++     +     K    +A ++PI++        + + Q    +
Sbjct: 4   IDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQTAREL 63

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                S ++            E  I EL  ++  +L P D       +LE+++G GG E+
Sbjct: 64  AAGDESFADEIAEL-------ESRIAELTTQLTDMLAPHDPHGPDDIVLEVKSGEGGEES 116

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG---------RGVFSRM 176
           ALF  DL RMY RYA    W V VL  + +D GGYK+    IS           GV+SRM
Sbjct: 117 ALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GRVHTSAA V V PE  EI +V I   D+RID  R+SG GGQ
Sbjct: 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQ 236

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTG++V   +E+SQ QN+ RA++VL ARL  +  ++     SA+R 
Sbjct: 237 GVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRA 296

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            QI + DRSERIRTYNF + RITDHRI    + L+ VL G +D + + L  A +   +  
Sbjct: 297 SQIRTVDRSERIRTYNFPENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADKQSRLQQ 356


>gi|108800851|ref|YP_641048.1| peptide chain release factor 1 [Mycobacterium sp. MCS]
 gi|119869991|ref|YP_939943.1| peptide chain release factor 1 [Mycobacterium sp. KMS]
 gi|126436449|ref|YP_001072140.1| peptide chain release factor 1 [Mycobacterium sp. JLS]
 gi|119361564|sp|Q1B542|RF1_MYCSS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223572|sp|A3Q3C2|RF1_MYCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223573|sp|A1UJZ5|RF1_MYCSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|108771270|gb|ABG09992.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           MCS]
 gi|119696080|gb|ABL93153.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           KMS]
 gi|126236249|gb|ABN99649.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           JLS]
          Length = 357

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 150/356 (42%), Positives = 209/356 (58%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I  L    A++E ++++           K    +A ++PI++     +  + + +    +
Sbjct: 8   IDALLAEHADLERQLADPALHADAGKARKAGRRFAQLAPIVATYRKLEAARGDLEAAREL 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D  S          EV  +E  + +LE +++ LL P+D  D    +LE+++G GG E+
Sbjct: 68  GADDAS-------FAAEVPELEATVDQLETQLSDLLAPRDPHDADDIVLEVKSGEGGEES 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRMKFES 180
           ALF  DL RMY RYA    W V +L  + +D GGYK+   +I        GV+SR+KFE 
Sbjct: 121 ALFAADLARMYIRYAERHGWSVTILDETTSDLGGYKDATLSIRSKGDSADGVWSRLKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V V PE  E   V I   D+RID  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL  +  ++ + + SA+R  QI 
Sbjct: 241 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQSLAEEQASADASADRASQIR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + RI DHRIN   + L+ VL G +D + + L  A +   + S
Sbjct: 301 TVDRSERIRTYNFPENRIADHRINFKAHNLDQVLDGDLDPLFDALAAADKQARLQS 356


>gi|78211899|ref|YP_380678.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
 gi|119361630|sp|Q3AMQ9|RF1_SYNSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78196358|gb|ABB34123.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
          Length = 365

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 139/354 (39%), Positives = 223/354 (62%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E ++++        +L     E + + P++       + + E      
Sbjct: 9   RLETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQ 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D+ + +LAQ E+ +++++   L   +   LLP+D  D++S +LEIRAG GG E
Sbjct: 69  LLKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYERY+    W V+ +S ++ D GG++E++ ++ G  V+S++KFE+GVHR
Sbjct: 129 ACLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V +  +D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLDISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RA+++LRA+L + E+   A   S++R+ Q+GSGDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRAQVGSGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R TDHR+      LE VL+G ++D+I   +   Q + + + S+
Sbjct: 309 EKIRTYNYKDNRTTDHRLGRNFT-LEPVLEGQLEDLIGACIAEEQRQKLEALSD 361


>gi|308182253|ref|YP_003926380.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
 gi|308064438|gb|ADO06330.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
          Length = 352

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLEG 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|306823422|ref|ZP_07456797.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC
           27679]
 gi|309802666|ref|ZP_07696770.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022]
 gi|304553129|gb|EFM41041.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC
           27679]
 gi|308220730|gb|EFO77038.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022]
          Length = 362

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 144/355 (40%), Positives = 206/355 (58%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+E       D   KL   +A +  I+S  + Y Q K + +    +  +  
Sbjct: 14  EEYRNIEQQMAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASEDP 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+ E E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLENELPEFEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V + S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 127 DLLRMYMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + ++DI  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ +  A + +  R  Q+ S 
Sbjct: 247 SAVRMTHIPTGIVVSMQDEKSQIQNRASALRVLKSRLLAMKHEEEAAQAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 361


>gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710a]
 gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710a]
          Length = 367

 Score =  245 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 182/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R AE+  ++ +    +       L  E  ++  +++ ++  D   ++ Q L  + 
Sbjct: 30  DVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTALDNDLRDAQALFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +         +   ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  HEEGDEETLVATE-----SDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     +SG   +  ++ E+G+HR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RL++ E ++   E+    + K  +G G  
Sbjct: 265 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +   + VL G +DD I+  L  
Sbjct: 323 -HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|116515052|ref|YP_802681.1| hypothetical protein BCc_111 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285552|sp|Q057W1|RF1_BUCCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116256906|gb|ABJ90588.1| peptide chain release factor 1 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 357

 Score =  245 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 162/358 (45%), Positives = 231/358 (64%), Gaps = 9/358 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSES-PSVDA--YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ ++E  +S +    D   + KL++E A +  +  +   +   K 
Sbjct: 1   MKKSIVNKLKSLKKRYIQLEKLLSNNYSKFDKREFSKLSKEKANLYDLYKEFMSWLSIKS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           E +D+  ++    +D ++  LAQ E+L   K  +E+E +I  LL+P D  D  SC +EIR
Sbjct: 61  EIKDIQLLL----NDLDLSTLAQEELLIALKRKKEIEKKIKMLLIPIDPYDKNSCFIEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           A TGG EAA+F GDL +MY +YA  + WKV++++  + + GGYKEI+  + G G   R+K
Sbjct: 117 AATGGHEAAIFSGDLCKMYMKYADFKSWKVDIINMHEGEKGGYKEIILKVIGIGACGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTSA TVA++PE  +    I    D++IDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPQTESQGRVHTSACTVAIMPEVPKSKRIILNTSDLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG +V    E+SQH+N+ +A+ VL A++Y         + S  RK 
Sbjct: 237 VNTTDSAVRITHLPTGCVVECQDERSQHKNKEKALSVLSAKIYSKMNAEKKLKNSLMRKS 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
            +G+G+RS+R RTYNFSQ R+TDHRINLT+Y+L  VL G +D +I PLL  HQA ++ 
Sbjct: 297 LLGTGERSDRNRTYNFSQNRVTDHRINLTIYRLNEVLLGKLDLLIEPLLQEHQADLLS 354


>gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2M]
 gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2]
 gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD1]
 gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD1]
 gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2]
 gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2M]
          Length = 367

 Score =  245 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L  E   +  +++ ++  D   ++  DL  + 
Sbjct: 30  DAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTELDNDLRDALDLFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +             ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  REEGDEDTLIASE-----EDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     +SG   +  ++ E+G+HR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RLY+ E ++   E+    + K  +G G  
Sbjct: 265 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAELRKRQAEQDKLESSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +   + VL G +DD I+  L  
Sbjct: 323 -HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|225437801|ref|XP_002274067.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297744098|emb|CBI37068.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 164/357 (45%), Positives = 241/357 (67%), Gaps = 3/357 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           ++ +  +++  +++R A ++  ++    S   Y +  +E   +   I  I+    K++E 
Sbjct: 24  LIGIMEQRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKLRSSIEHITELRNKQKEI 83

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L +++ + + D ++ ++A  E+    +E + L+N +   LLPKD  D++ CILE+RAG
Sbjct: 84  DGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEADERDCILEVRAG 143

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA+LF  D+F+MYE+Y+    WK EV+  +++D  GYKE    ISG GV+ ++KFE
Sbjct: 144 TGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLKFE 203

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG+HRVQRVP TE SGRVHTSA +VA+LP+A E+DV +  ED+RIDT R+ GSGGQH NT
Sbjct: 204 SGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANT 263

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRITHIP+G+ V    E+SQH N+ +A+KVL A+LY++ER R+  +RS  R  QIG
Sbjct: 264 TNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRMEQIG 323

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGS 354
           SGDRSERIRTYNF QGR+TDHR+ +T + +  V+QG  +D  I+ LL   +   I S
Sbjct: 324 SGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQQEMDAIAS 380


>gi|320334062|ref|YP_004170773.1| peptide chain release factor 1 [Deinococcus maricopensis DSM 21211]
 gi|319755351|gb|ADV67108.1| Peptide chain release factor 1 [Deinococcus maricopensis DSM 21211]
          Length = 362

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 143/362 (39%), Positives = 218/362 (60%), Gaps = 14/362 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            L+  ++  L++ + ++E  +++   +     Y ++   +  ++PI++    Y     + 
Sbjct: 1   MLTQ-KLAALEHEYEQVEAHLADPNIISDQGQYRRVARRHRELTPIVNLWREYCTLDTQA 59

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   ++    SD E+RDLA+ ++ A E  +R ++ E+  LLLP D  D   CI+EIRAG
Sbjct: 60  RDARELL----SDPEMRDLARADLDASEARMRAIDTELEVLLLPTDPHDPHDCIVEIRAG 115

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EAALF  DL  MYERYA     K+ VL ++++D GG  ++   ++G G F   +FE
Sbjct: 116 AGGDEAALFAADLLSMYERYAEGAGLKLAVLDANESDLGGLSKVTFEVTGDGAFRAFRFE 175

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
            GVHRVQRVPATE  GR+HTS  TVAVLP+  + +VD+ L ++RID  R+ G+GGQ VNT
Sbjct: 176 RGVHRVQRVPATETQGRIHTSTVTVAVLPQVEDAEVDLDLSEVRIDVFRSQGAGGQGVNT 235

Query: 240 TDSAVRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           TDSAVR  + P      ++V    +SQ +NR +A+ VLRARL + ER     +  A+R  
Sbjct: 236 TDSAVRAVYRPGTPDEIVVVCQDGRSQIKNREKALVVLRARLAERERAVREAQERADRAA 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYK--LEYVLQGYIDDIINPLLTAHQAKMIG 353
           Q+GSGDRSE+IRTYN+ Q R+TDHR++  +    LE V+ G +  +I  L+   +  ++ 
Sbjct: 296 QVGSGDRSEKIRTYNYPQNRVTDHRLSGDVKNFPLETVVAGGLAPLIAALVNVEREALLQ 355

Query: 354 SA 355
             
Sbjct: 356 EL 357


>gi|50119718|ref|YP_048885.1| peptide chain release factor 2 [Pectobacterium atrosepticum
           SCRI1043]
 gi|81646129|sp|Q6D946|RF2_ERWCT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49610244|emb|CAG73687.1| putative peptide chain release factor 2 [Pectobacterium
           atrosepticum SCRI1043]
          Length = 365

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQLAQGLEDVTGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    + +     A    +     ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEEDDEDTFNETS-----AELDVLENKLGQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+    +++SQH+N+ +AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 263 ITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQVMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|171741092|ref|ZP_02916899.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC
           27678]
 gi|171276706|gb|EDT44367.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC
           27678]
          Length = 362

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 144/355 (40%), Positives = 207/355 (58%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+E       D   KL   +A +  I+S  + Y Q K + +    +  +  
Sbjct: 14  EEYRNIEQQMAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASEDP 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+ E+E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLENELPEIEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V + S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 127 DLLRMYMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + ++DI  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ +  A + +  R  Q+ S 
Sbjct: 247 SAVRMTHIPTGIVVSMQDEKSQIQNRASALRVLKSRLLAMKHEEEAAQAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 361


>gi|190572913|ref|YP_001970758.1| peptide chain release factor 1 [Stenotrophomonas maltophilia K279a]
 gi|229576662|sp|B2FQ14|RF1_STRMK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190010835|emb|CAQ44444.1| putative peptide chain release factor 1 [Stenotrophomonas
           maltophilia K279a]
          Length = 360

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 167/337 (49%), Positives = 230/337 (68%), Gaps = 10/337 (2%)

Query: 26  SPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
              V     +  L+ E+A + PI   ++   + K +      +      D ++R+LA  E
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPIAIALADESRAKADLAAAEGMRA----DPDLRELADEE 81

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           + A +  + ELE E+  LL+P+D  D+ +  LE+RAGTGG EAA+F GDLFRMY RYA  
Sbjct: 82  IAAAQARLLELEQELALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAER 141

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + WKVE+ S +  + GGYKE+VA + GRG FSR+KFESG HRVQRVPATE+ GR+HTSAA
Sbjct: 142 QGWKVEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAA 201

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           TVA++PEA E+D  +    D+++DT R+SG+GGQHVN T+SA+RITH+PTG++V   +E+
Sbjct: 202 TVAIIPEADEVDDIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTER 261

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR 320
           SQH NR +AMK L+A+L D ER+R    ++ +R+LQ+GSGDRS+RIRTYNF QGRITDHR
Sbjct: 262 SQHANRDKAMKRLKAQLLDAERQRQDAAQAESRRLQVGSGDRSQRIRTYNFPQGRITDHR 321

Query: 321 I-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +  LTLY L  +L G +D ++  L   HQ   +   S
Sbjct: 322 VEGLTLYDLPNILAGDLDPLLQRLSHEHQVDALAQLS 358


>gi|27904663|ref|NP_777789.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|29427417|sp|P59456|RF1_BUCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27904060|gb|AAO26894.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 362

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 150/361 (41%), Positives = 235/361 (65%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     K++  L  R+ EIE  +S+   +   + + +L++EY  +S I      +     
Sbjct: 1   MKSSMMKKLESLHRRYEEIESMLSDRTVISNQEKFRELSQEYLKLSDINYCFVQWKNCNH 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++     DSE+ D+A+ E+  + K+++++E EI  LLLP D +D ++C LEIR
Sbjct: 61  DVIETKLLLL----DSELHDVAEQELQMLSKKMKKIETEIQVLLLPCDPNDQQNCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           + +GG EAA+F GDLFRMY +Y+  + WK  ++  + +  GGYK+I+  I+G+G + ++K
Sbjct: 117 SASGGDEAAIFSGDLFRMYIKYSEFQNWKTNIIHMTHSLKGGYKDIIVKITGKGSYGKLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GRVHTS   VAV+P   + +++ + + D++IDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRVHTSTCIVAVIPVVPKKEIEKVNINDLKIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIP+G +V    E+SQH+N+ +A+ VL +R+   E      + +  R+ 
Sbjct: 237 VNTTDSAVRITHIPSGQVVECQDERSQHKNKAKALSVLVSRIKAAELYNQRKKNAIQRRD 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+G RS+R RTYNF+Q R+TDHRINL +Y L+ VL G +D +I P++  H A ++ + 
Sbjct: 297 LLGTGMRSDRNRTYNFAQNRVTDHRINLVVYCLDEVLDGKLDVLIEPIIQEHNADVLSNL 356

Query: 356 S 356
           S
Sbjct: 357 S 357


>gi|195650889|gb|ACG44912.1| peptide chain release factor 1 [Zea mays]
          Length = 356

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 246/355 (69%), Gaps = 3/355 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             +++  ++ R A ++ ++++   S + Y +  +E+  +   +  I     K++E + L 
Sbjct: 1   MEQRMKLIEQRSAYLQEQINQPAASPEEYSRANKEFRKLESTMELIKDLRSKQEEIEGLK 60

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ + + + ++R++A+ E+L   +E + L++E+   LLPKD  D+K CILE+RAGTGG 
Sbjct: 61  SLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGGE 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  D+FRMYE+YA    WK +V+   ++   GYKE   TISG G F ++KFESG+H
Sbjct: 121 EASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE SGR+HTSA +VAVLP+A E+DV +  ED+RIDT R+ GSGGQ VNTTDSA
Sbjct: 181 RVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSA 240

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTG +V    E+SQH N+ +A+KVLRARLY++ER+R+  +RS  R  QIGSGDR
Sbjct: 241 VRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSEQIGSGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHR+ +T + +  V++G  +D  ++ LL   +   I S  
Sbjct: 301 SERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQEEMDAISSFG 355


>gi|116075738|ref|ZP_01472997.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
 gi|116067053|gb|EAU72808.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
          Length = 364

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 221/353 (62%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++    N F  +E ++++        +L     E + + P++       Q ++E Q   +
Sbjct: 9   RLDAATNSFHNLERQLADPDVASDPKRLQSIARERSRLEPLVQDYQSLQQVEEERQQAES 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   DS + +LA++E+  + +    L   +   LLP D  D++S +LEIRAG GG E
Sbjct: 69  LLKESRGDSGMEELARLEIQDLNERQATLIERVTLALLPSDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYERY + + W V+ +S++  D GGY+E++ ++ G  VFS++KFE+GVHR
Sbjct: 129 ACLWAGDLARMYERYGSRQGWNVQPVSANAADLGGYRELILSVKGDAVFSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   ++ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPTELEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RA+++LRA+LY+ +        S+ R+ Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERQLAEANAAESSARRAQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN    R+TDHR+      L+ +L+G +DD+I   +   Q + + + S
Sbjct: 309 EKIRTYNAKDNRVTDHRLGRNFS-LDPMLEGQMDDVIGACIAEEQREKLEALS 360


>gi|86606113|ref|YP_474876.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
 gi|119361625|sp|Q2JUK1|RF1_SYNJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86554655|gb|ABC99613.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
          Length = 361

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 227/355 (63%), Gaps = 6/355 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEE---YAAISPIISKISIYDQKKQEEQDLH 63
           +Q+ +++  F E+ +R+++        +L       +++   +     + +  +E +   
Sbjct: 8   EQLKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQTFHEWQKLTRELKQTE 67

Query: 64  TVIGD-HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++ +  + D E+  +A+ E+  +     +LE ++  LLLP+D +D+K+ +LEIRAGTGG
Sbjct: 68  ELLREVASDDPELEAMARAELEQLRVRQEQLEEKLTLLLLPRDPNDEKNIMLEIRAGTGG 127

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAAL+  DL RMY RYA    W V + S S+ + GGYKE +  I G  V+S++KFE+GV
Sbjct: 128 EEAALWAADLARMYTRYAEKMGWSVRLASLSEGEMGGYKEAILEIRGDQVYSKLKFEAGV 187

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TEA GRVHTS ATVAV+PE  E++V I  +DI I T R+ G+GGQ+VN  ++
Sbjct: 188 HRVQRVPVTEAQGRVHTSTATVAVMPEVDEVEVVIDPKDIEIKTARSGGAGGQNVNKVET 247

Query: 243 AVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AV + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ +      S+ R++Q+G+G 
Sbjct: 248 AVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQASISSARRMQVGTGS 307

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSE+IRTYN+   R+TDHR+N     LE +L+G +D++I   +  +Q +++   S
Sbjct: 308 RSEKIRTYNYKDNRVTDHRLNQNFL-LEPILEGELDELIQACIGLYQKELLAELS 361


>gi|317013501|gb|ADU80937.1| peptide chain release factor 1 [Helicobacter pylori Gambia94/24]
          Length = 352

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S    V       +L++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSVEVVSDIKRLTELSKEQSSIEEISVASKEYLSVLEN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+  I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V +   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
           52237]
 gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
           52237]
          Length = 367

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 182/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R AE+  ++ +    +       L  E  ++  +++ ++  D   ++ Q L  + 
Sbjct: 30  DVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTALDNDLRDAQALFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +         +   ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  HEEGDEETLVATE-----SDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     +SG   +  ++ E+G+HR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RL++ E ++   E+    + K  +G G  
Sbjct: 265 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +   + VL G +DD I+  L  
Sbjct: 323 -HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|255548277|ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545675|gb|EEF47179.1| peptide chain release factor, putative [Ricinus communis]
          Length = 422

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 168/361 (46%), Positives = 242/361 (67%), Gaps = 7/361 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIEL---RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           ++ +  +++  +++R A +E    ++  SP+   Y +  +E   +   +  IS     ++
Sbjct: 61  LIRIMEQRLSAIEHRSAYLENFIDKLEASPA--EYSRANKELRKLRRPVELISELRSIQK 118

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           E   L +++ +   D  + D+A  E+    +E + L+N +   LLP D  D++ CILE+R
Sbjct: 119 EIDGLRSLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLLKSLLPTDDADERDCILEVR 178

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA+LF  D+FRMYERY+  + WK EV+  +++D  GYKE  A ISG GVF ++K
Sbjct: 179 AGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYKEASAAISGAGVFGKLK 238

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESG+HRVQRVP TE SGRVHTSA +VA+LP+A E+DV +  ED+RIDT R+ GSGGQH 
Sbjct: 239 FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 298

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTT+SAVR+TH+PTG+ V+   E+SQH N+ +A+KVL A+LY++ER R+   RS  R  Q
Sbjct: 299 NTTNSAVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIERSRIQMSRSKLRSEQ 358

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           IGSGDRSERIRTYNF QGR+TDHR+ +T + +  ++QG  +D  I+ LL   +   I S 
Sbjct: 359 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAINNMMQGESLDVFIDALLLQQEMDAIASF 418

Query: 356 S 356
           S
Sbjct: 419 S 419


>gi|218507716|ref|ZP_03505594.1| peptide chain release factor 1 [Rhizobium etli Brasil 5]
          Length = 282

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 193/280 (68%), Positives = 237/280 (84%)

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
           +       +++ I  LE E+  LLLPKD  D+KS ILEIRAGTGGSEAALF GDLFRMYE
Sbjct: 1   MPNSNCPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYE 60

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+AA + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFESGVHRVQRVP TEA GR+
Sbjct: 61  RFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRI 120

Query: 198 HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTS 257
           HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTTDSAVRITH+P+GI+VTS
Sbjct: 121 HTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTS 180

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRIT 317
           SEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSGDRSERIRTYNF QGR+T
Sbjct: 181 SEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSGDRSERIRTYNFPQGRVT 240

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 241 DHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 280


>gi|15611143|ref|NP_222794.1| peptide chain release factor 1 [Helicobacter pylori J99]
 gi|7388059|sp|Q9ZMZ0|RF1_HELPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4154581|gb|AAD05656.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Helicobacter pylori J99]
          Length = 352

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 243/354 (68%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S    V    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSVEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEG 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+  I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|320169793|gb|EFW46692.1| peptide chain release factor 1 [Capsaspora owczarzaki ATCC 30864]
          Length = 523

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 165/353 (46%), Positives = 243/353 (68%), Gaps = 6/353 (1%)

Query: 9   ICDLKNRFAEIELRMSE--SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           + ++   +  +  +M+     +      L  + AA++P++  +     K+++  DL  ++
Sbjct: 156 LSNVTRDYQALTQQMTSISPSATKEINVLKGQIAALNPLVDALQRMTAKRKDIDDLDAMV 215

Query: 67  GD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
               + +D E+R +AQ E     +++ ELE E+  +L+PK+  DD++ ILE+RAGTGG E
Sbjct: 216 EASRNENDVEMRKMAQSEWTDAVEQLYELEQELLNVLVPKNEVDDRNAILEVRAGTGGLE 275

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF  D+F MY+ YA +R WK EV+  S +D GG+KE  ATISG GVF  +KFESGVHR
Sbjct: 276 ASLFSSDMFTMYQNYAEIRGWKFEVIDISRSDVGGFKEASATISGYGVFGHLKFESGVHR 335

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTS  TVA+LPEA ++D+++   D+RI+TMRASG+GGQHVN T+SA+
Sbjct: 336 VQRVPQTESQGRVHTSTVTVALLPEAQDVDIELNERDLRIETMRASGAGGQHVNKTESAI 395

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIP+GI V    ++SQH+NR +A  VLRARLY+++R+++A ER+A+R  Q+G+G RS
Sbjct: 396 RVTHIPSGIAVHVQEDRSQHKNRAKAYSVLRARLYEIQREKLAQERAAHRAEQVGTGSRS 455

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           ERIRTYNF Q R+TDHR+N+TL+ +   L G  +D+II  L T   A+ +   
Sbjct: 456 ERIRTYNFPQDRVTDHRVNVTLHGVPEFLLGEGLDEIIASLRTHEHAEELAHL 508


>gi|126697059|ref|YP_001091945.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9301]
 gi|166223586|sp|A3PF19|RF1_PROM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126544102|gb|ABO18344.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9301]
          Length = 364

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 143/353 (40%), Positives = 227/353 (64%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E+++++    +   KL     E + + P++   +      +E +D   
Sbjct: 9   RLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVLDFNKLLDTDKEIEDSKN 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ ++ +D E+  L   E++ +E+   EL  +    LLPKD  D++S +LEIRAG GG+E
Sbjct: 69  LLKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAGGNE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V+ +S+S++D GG+KE+V ++ G  V+S++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ + T R+ G+GGQ+VN  ++A+
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ K    +  + R  Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYNF   R TDHR+  + + LE +L G +D++IN  +   Q +M+   +
Sbjct: 309 EKIRTYNFKDNRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQKRMMEDFN 360


>gi|269128128|ref|YP_003301498.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183]
 gi|268313086|gb|ACY99460.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183]
          Length = 361

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 152/359 (42%), Positives = 215/359 (59%), Gaps = 19/359 (5%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + +L   + EIE ++++       +A  +L + YA + PI+         + + +    +
Sbjct: 3   LDELIGEYTEIEGKLADPAVHADQNAARRLGKRYAQLRPIVETARQLRSVEGDLEAAREL 62

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                  +        E   +EK   ELE ++  LL+P+D +DDK  ILEI+AG GG E+
Sbjct: 63  -------AAEDGAFAAEAAELEKRRTELEQKLRKLLIPRDPNDDKDVILEIKAGEGGEES 115

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG--------VFSRMK 177
           ALF GDL RMY RYA    WK E+LSS  +D GGYK++   +  R          +S +K
Sbjct: 116 ALFAGDLLRMYLRYAERIGWKTEILSSQPSDLGGYKDVTVAVKARPGPDGEPIGAWSHLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FE GVHRVQRVP TE+ GR+HTSA  V V PEA EIDV I   D+RID  R+SG GGQ V
Sbjct: 176 FEGGVHRVQRVPVTESQGRIHTSAVGVLVTPEAEEIDVQIDPNDLRIDVYRSSGPGGQSV 235

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTG++V   +EKSQ QN+ +AM++LR+RL  + ++      +A R+ Q
Sbjct: 236 NTTDSAVRITHLPTGVVVSCQNEKSQLQNKEQAMRILRSRLLALAQQEAEAAAAAERRSQ 295

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           + + DRSER+RTYNF + RI+DHR+    Y L+ VL G + ++I  L+ A   + +  A
Sbjct: 296 VRTVDRSERVRTYNFPENRISDHRVGYKAYNLDQVLDGDLHNVIQTLVEADLERRLAEA 354


>gi|224283865|ref|ZP_03647187.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287872|ref|YP_003939130.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           bifidum S17]
 gi|311064752|ref|YP_003971477.1| peptide chain release factor 1 (RF-1) PrfA [Bifidobacterium bifidum
           PRL2010]
 gi|313141020|ref|ZP_07803213.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
 gi|309251808|gb|ADO53556.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           bifidum S17]
 gi|310867071|gb|ADP36440.1| PrfA Bacterial Peptide Chain Release Factor 1 (RF-1)
           [Bifidobacterium bifidum PRL2010]
 gi|313133530|gb|EFR51147.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 362

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 142/355 (40%), Positives = 206/355 (58%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+    V   D   KL   +A +  I+S    Y   + + +    + G+  
Sbjct: 14  EEYQSIEQQMASPEVVTNPDKMRKLGRRHAELGAIVSAYQSYTAVRDDLEAAREMAGEDP 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             ++           +E E+   E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  EFADEAK-------RLEAELPAAEEKLRNALIPRDPDDARDVIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V V S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 127 DLLRMYLRYAEKRGWAVTVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASLKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A+ + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEAERLANQ 361


>gi|224534432|ref|ZP_03675010.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
 gi|224514534|gb|EEF84850.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
          Length = 357

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 250/355 (70%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   IE ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1   MFLEKLNSATSKIKSIEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILNQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++ +     E+++L + E++ ++K+  E+E+EI  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DNKTIL-EKEDQQEMKELIKQELIDLDKKKEEVEHEIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYGMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSNNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL    Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDPLLDPLTIELQEQTLKS 354


>gi|22331914|ref|NP_191850.2| APG3 (ALBINO AND PALE GREEN); translation release factor/
           translation release factor, codon specific [Arabidopsis
           thaliana]
 gi|19699096|gb|AAL90914.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
 gi|21928033|gb|AAM78045.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
 gi|34392768|dbj|BAC82693.1| Chloroplast Release Factor 1 [Arabidopsis thaliana]
 gi|332646889|gb|AEE80410.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 422

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 130/354 (36%), Positives = 222/354 (62%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++  + E+ +++++   V     Y KL +  + +  +++    +   +++  +   
Sbjct: 60  KMESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKV 119

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D ++ ++   E+ ++ KEI ELE ++  LLLP D  D ++ +LE+RAGTGG E
Sbjct: 120 LAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDE 179

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA++ GDL RMY+RY+    WK  ++S S+ + GGYK  V  I G  V+S++K+ESGVHR
Sbjct: 180 AAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHR 239

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTS ATVA++PEA E++V I  +DI + + R+ G+GGQ+VN  ++A+
Sbjct: 240 VQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAI 299

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H P+GI +  + E++Q +N+ RA ++LRA+LY+++ +    +    RK Q+G+G RS
Sbjct: 300 DLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARS 359

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R+TDHR+ +  + L   L G ++D +       Q +++   SE
Sbjct: 360 EKIRTYNYKDSRVTDHRLKMN-FALTTFLDGALEDAVQACAALEQKELMEELSE 412


>gi|209519985|ref|ZP_03268764.1| peptide chain release factor 2 [Burkholderia sp. H160]
 gi|209499582|gb|EDZ99658.1| peptide chain release factor 2 [Burkholderia sp. H160]
          Length = 384

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            D   R  E+   + +    +       L +E   +   + K++       + QDL  + 
Sbjct: 47  DDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVNDAQDLFEMA 106

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  +         A  + I     ++ +  +  +  D  +  L+I+AG GG+EA 
Sbjct: 107 REEADDETLLACE-----ADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGGTEAC 161

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  ++ D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 162 DWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGVHRLV 221

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 222 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 281

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+P+GI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G  
Sbjct: 282 ITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWG-- 339

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 340 -HQIRSYVLDNSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 382


>gi|297626232|ref|YP_003687995.1| peptide chain release factor 1 (RF-1) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921997|emb|CBL56559.1| Peptide chain release factor 1 (RF-1) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 359

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 133/355 (37%), Positives = 206/355 (58%), Gaps = 16/355 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L+  FA++E ++++   V       K+   Y+ ++ ++  +  + Q  ++      +   
Sbjct: 8   LRQEFADLEKQLADPAVVSDQARSRKVGRRYSELTGVVHALDEHQQLTEDLSAARELA-- 65

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D      A      +++   +L      LL P+D  D    I+EI++G GG E+ALF
Sbjct: 66  -DDDPAFAAEADQISARLDEVTDKLTA----LLAPRDPLDSNDAIMEIKSGEGGEESALF 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRMKFESGVH 183
            GDL  MY+ +A    W  E++ +   D GG+K +           +  +  +KFE GVH
Sbjct: 121 AGDLLNMYQHFAEREGWSTEIIDAEPTDLGGFKSVTLAFRATGHDAQAPYGALKFEGGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTSAA V V+P+  E +++I  +D+RID  R++G GGQ VNTTDSA
Sbjct: 181 RVQRVPVTESQGRIHTSAAGVLVMPDVEESEIEINPDDLRIDVYRSTGKGGQGVNTTDSA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG++V +  ++SQ QN+ +A++VLRARL     ++ A +    RK Q+ + DR
Sbjct: 241 VRITHLPTGVVVTSQDQRSQLQNKEQALRVLRARLVAAAEEQAAQQAEQARKSQVRTVDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SERIRTYNF + RITDHRI    + L+ VL G ++ +I  L  A  A+ +G A+E
Sbjct: 301 SERIRTYNFPENRITDHRIGFKAHNLDAVLGGELEPLIEALQAADLAERLGQATE 355


>gi|298711208|emb|CBJ32429.1| peptide chain release factor 1 [Ectocarpus siliculosus]
          Length = 448

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 141/358 (39%), Positives = 232/358 (64%), Gaps = 9/358 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +Q+  +   F E+  R+ +   +       ++++E A++  I++  + Y +  ++ +   
Sbjct: 78  EQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAK 137

Query: 64  TVIGDHNS---DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            +  + +    D+E++++A+ E+  +E+ +  LE ++  LLLP D +DD++ +LEIRAGT
Sbjct: 138 EMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDDRNVMLEIRAGT 197

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAAL+  +L  +Y++YA  + W ++V+ S+  + GG++ ++A ++G  V+S++K+E+
Sbjct: 198 GGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEA 257

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE  GRVHTS ATVA++PE  E+ V+I  EDI I T R+ GSGGQ+VN  
Sbjct: 258 GVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKV 317

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAV + H PTGI +  + E+SQ +NR  AMK+LR+R+YD+E ++   E S NRK Q+GS
Sbjct: 318 ESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAETSGNRKAQVGS 377

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
           G RSE+IRTYN+   R +DHRI    + L   L G  +DD+I   +   Q +++   +
Sbjct: 378 GSRSEKIRTYNWKDSRCSDHRIG-KNFPLNNFLSGSGLDDMIGACILLDQQELMAELA 434


>gi|330447415|ref|ZP_08311064.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491606|dbj|GAA05561.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 347

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 176/343 (51%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E A++  ++  I   DQ  ++ + L  + 
Sbjct: 10  DAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVEDVEGLLELA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        ++          E+ E   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 70  VEEEDQETFDEIEPE-----LAELEEKLAKLEFRRMFAGDHDPSDCYVDLQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+A  + +K EV+  S+ D  G K     +SG   +  ++ E+GVHR+ 
Sbjct: 125 DWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRVSGEYAYGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  V PE  +   +DI   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 185 RKSPFDSGGRRHTSFASAFVYPEIDDNIAIDINPSDLRIDVYRASGAGGQHVNTTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+N+ +AMK L+A+L++ E ++   E+    + K  IG G  
Sbjct: 245 ITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFELQKQNAEKQANEDSKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 303 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344


>gi|307636767|gb|ADN79217.1| peptide chain release factor 1 [Helicobacter pylori 908]
 gi|325995353|gb|ADZ50758.1| Peptide chain release factor 1 [Helicobacter pylori 2018]
 gi|325996950|gb|ADZ49158.1| Peptide chain release factor 1 [Helicobacter pylori 2017]
          Length = 352

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 244/354 (68%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  V       +L++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILRRYDELTALLSSAEVVSDIKRLTELSKEQSSIEEISVASKEYLSVLEG 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+  I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V +   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQ 350


>gi|187924547|ref|YP_001896189.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
 gi|187715741|gb|ACD16965.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
          Length = 417

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            D   R  E+   + +    +       L  E   +   + K++  D   ++ QDL  + 
Sbjct: 80  DDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDAQDLFDMA 139

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +  +         +  + I +   ++ +  +  +  D  +  L+I+AG GG+EA 
Sbjct: 140 REEDDEETLLACE-----SDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEAC 194

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  +D D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 195 DWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLV 254

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +VDI   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 255 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVR 314

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIP+GI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G  
Sbjct: 315 ITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWG-- 372

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 373 -HQIRSYVLDNSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 415


>gi|217033144|ref|ZP_03438604.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298736978|ref|YP_003729508.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
 gi|216945129|gb|EEC23827.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298356172|emb|CBI67044.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
          Length = 352

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEG 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIAHAQSQ 350


>gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
 gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
          Length = 347

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +A+  I++ I   DQ  ++   L  + 
Sbjct: 10  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEEIVTTIDQLDQGMEDVSGLLELA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    +     ++ +  +     D  +C L+++AG+GG+EA 
Sbjct: 70  IEADDEETFNEAV-----AELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 125 DWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 185 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    + K  IG G  
Sbjct: 245 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 303 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345


>gi|42569997|ref|NP_182225.3| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis thaliana]
 gi|330255695|gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 162/359 (45%), Positives = 244/359 (67%), Gaps = 3/359 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           ++ +  +++  +++R A ++  +++   S + + +  +E   +   +  I+    K++E 
Sbjct: 52  LIKIMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRANKELRKLRDSMLLINDLRAKQKEI 111

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L +++ + + D ++ DLA  E+    +E + L+  +   LLPKD  D++ CILE+RAG
Sbjct: 112 DGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVRAG 171

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA+LF  D+FRMYERY+  + WK +++  +++D  GYKE  A I G  V+ ++KFE
Sbjct: 172 TGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLKFE 231

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG+HRVQR+P TE SGR+HTSA +VA+LP+A E+DV +  ED+RIDT R+ GSGGQH NT
Sbjct: 232 SGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANT 291

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRI H+PTG+MV+   E+SQH NR +A+KVL ARLY++ER R+ + RS  R  QIG
Sbjct: 292 TNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQIG 351

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           SGDRS RIRTYNF QGR+TDHR+ +T + +E ++QG  +D  I+ LL   +   I S S
Sbjct: 352 SGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFS 410


>gi|23335569|ref|ZP_00120804.1| COG0216: Protein chain release factor A [Bifidobacterium longum
           DJO10A]
 gi|189440751|ref|YP_001955832.1| peptide chain release factor 1 [Bifidobacterium longum DJO10A]
 gi|238692046|sp|B3DR51|RF1_BIFLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189429186|gb|ACD99334.1| Protein chain release factor A [Bifidobacterium longum DJO10A]
          Length = 362

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 203/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+    V   D   KL   +A +  I+     + Q K +      + G+  
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVDAYKAWLQVKDDLAAAQEMAGEDA 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+  +E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLEDELPGVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V V S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 127 DLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI V    EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 361


>gi|68171785|ref|ZP_00545129.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998796|gb|EAM85504.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 311

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 172/309 (55%), Positives = 229/309 (74%), Gaps = 2/309 (0%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           I  Y+  +++   L  +I +  +D E++ LA+ E    +K++ ++++++   LLPKD DD
Sbjct: 1   IDQYNILQKDIAGLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDD 60

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
            ++ ILEIRAGTGG EAALFV DL+RMY +YA  + WK E ++SS    GG+KEI   IS
Sbjct: 61  ARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCIS 120

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMR 228
           G  VF+R+KFESGVHRVQRVP TEASGR+HTSAATVAVLPE  E+D+ I  +D+RID  R
Sbjct: 121 GSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRIDVYR 180

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           +SG GGQ VNTTDSAVRITHIP+GI+V    EKSQH+N+ +A+KVLRARLY++E+++   
Sbjct: 181 SSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRDA 240

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTA 346
           E S  RK QIGSGDRSERIRTYNF Q RITDHRINLTLY+L+ ++ +G +D+ I  L+  
Sbjct: 241 EISQMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIAE 300

Query: 347 HQAKMIGSA 355
            +A  + + 
Sbjct: 301 DEANKLKNL 309


>gi|260435474|ref|ZP_05789444.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
 gi|260413348|gb|EEX06644.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
          Length = 365

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 139/354 (39%), Positives = 223/354 (62%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E ++++        +L     E + + P++       + + E      
Sbjct: 9   RLETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQ 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   D+ + +LAQ E+ +++++   L   +   LLP+D  D++S +LEIRAG GG E
Sbjct: 69  LLKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYERY+    W V+ +S ++ D GG++E++ ++ G  V+S++KFE+GVHR
Sbjct: 129 ACLWAGDLARMYERYSQKVGWAVQSMSCTEADLGGFRELILSVRGESVYSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V +  +D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLDISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RA+++LRA+L + E+   A   S++R+ Q+GSGDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRAQVGSGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R TDHR+      LE VL+G ++D+I   +   Q + + + S+
Sbjct: 309 EKIRTYNYKDNRTTDHRLGRNFT-LEPVLEGQLEDLIGACIAEEQRQKLEALSD 361


>gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           32953]
 gi|81638630|sp|Q666T2|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           32953]
          Length = 366

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E + +  I++ I   +Q  ++   L  + 
Sbjct: 29  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVSGLLELA 88

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +      +A  + +     ++ +  +     D  +C L+++AG+GG+EA 
Sbjct: 89  VEADDEETFNET-----IAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEAQ 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 144 DWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 204 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    + K  IG G  
Sbjct: 264 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWG-- 321

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 322 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364


>gi|194477029|ref|YP_002049208.1| peptide chain release factor 1 [Paulinella chromatophora]
 gi|171192036|gb|ACB42998.1| peptide chain release factor 1 [Paulinella chromatophora]
          Length = 366

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 143/354 (40%), Positives = 231/354 (65%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E ++++       D   K   E++ + PI+       Q +++ ++   
Sbjct: 9   RLETATRTFENLERQLADPDVAVNPDQLQKFAREHSRLEPIVIDSKALKQAQKQREEAIL 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +H +D E+  LA  E+ A+++ I  L  ++   LLP+D+ D++S +LEIR+GTGG E
Sbjct: 69  LLREHRNDPEMEALANEEIGALDEVIERLTKQLTLALLPRDSRDERSVMLEIRSGTGGGE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY+    W+V+ LSSS+ + GG++E++  I G GV+S++K+E+GVHR
Sbjct: 129 ACIWAGDLARMYERYSQSVGWQVQALSSSEAELGGFRELILAIRGEGVYSKLKYEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA +++V +  +DI I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADKVEVQLDPKDIEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RA+++LRA+L + +    A   S+ RK Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLERQLAEAAAAESSARKAQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R TDHR+      L+ +L G +++II+  +   Q K + + ++
Sbjct: 309 EKIRTYNYKDNRTTDHRLGQNFS-LDSILNGNLEEIIDTCIALDQQKQLENLAD 361


>gi|163840178|ref|YP_001624583.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC
           33209]
 gi|189039986|sp|A9WNB3|RF1_RENSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|162953654|gb|ABY23169.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC
           33209]
          Length = 360

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 150/361 (41%), Positives = 207/361 (57%), Gaps = 18/361 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + I  L +  A++++R+S+           KL   YA +S I+       Q   +     
Sbjct: 3   ESIQGLLDEHADLQIRLSDPAVHADQSLARKLGRRYAELSTIVEGYHQVQQLSDDLAAAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   DSE      +    +     +L      LL+P+D DD +  ILE++AG GG 
Sbjct: 63  EMASE---DSEFAAEVPVLEEQLAHAQEKL----RRLLIPRDPDDGRDVILEVKAGEGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           E+ALF  DL RMY RYA  + WK+EV+S++++D GGYK+I   +         GVF+ +K
Sbjct: 116 ESALFAADLVRMYSRYAESKGWKIEVISATESDLGGYKDIQIAVKGRSNDPAEGVFAALK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           FE GVHRVQRVP TE+ GR+HTSAA V V PE  E +   I   D++ID  R+SG GGQ 
Sbjct: 176 FEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVEISQNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH PTGI+V   +EKSQ QNR   M+VLRAR+   +++ +  E SA RK 
Sbjct: 236 VNTTDSAVRITHFPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQELIDAENSAVRKS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + DRSERIRTYNF + RI DHR     Y L+ V+ G +  +I   +   +   + + 
Sbjct: 296 QIRTMDRSERIRTYNFPENRIADHRTGYKSYNLDAVMNGDLGPVIQSAIEMDEQSRLDAL 355

Query: 356 S 356
           S
Sbjct: 356 S 356


>gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16]
 gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16]
          Length = 357

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 111/339 (32%), Positives = 173/339 (51%), Gaps = 15/339 (4%)

Query: 15  RFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  E+   + +    +   +   L +E  AI  ++S +S         ++L  +  +   
Sbjct: 25  RLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTDDLSGAEELFELAREEGD 84

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +  +      A  K   E+   + +  +     D  +  ++I+AG GG+EA  +   
Sbjct: 85  DDTLEAIE-----ADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAGAGGTEACDWASM 139

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L R Y +Y   + +K EVL  S+ D  G K     I G   F  ++ E+GVHR+ R    
Sbjct: 140 LLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRLVRKSPF 199

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           ++SG  HTS ++V V PE     +V++   D+R+DT RASG+GGQH+N TDSAVRITHIP
Sbjct: 200 DSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIP 259

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V   +++SQH+NR  AM +L++RLY+ E ++   E       K  +G G    +IR
Sbjct: 260 TGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWG---HQIR 316

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 317 SYVLDQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355


>gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
 gi|238693117|sp|B4EDB1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
          Length = 367

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L  E   +  +++ ++  D   ++  DL  + 
Sbjct: 30  DAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  +             ++     +I +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  REEGDEDTLLASE-----EDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     ++G   +  ++ E+G+HR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RLY+VE ++   E+    + K  +G G  
Sbjct: 265 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+ +     VL G +DD I+  L  
Sbjct: 323 -HQIRSYVLDQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 365


>gi|291457338|ref|ZP_06596728.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213]
 gi|291381173|gb|EFE88691.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213]
          Length = 362

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 142/355 (40%), Positives = 203/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+    V   D   KL   +A +  I+     + Q K + +    + G+  
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKAWLQLKDDLEAAQEMAGEDA 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+   E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLESELPGAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V + S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 127 DLLRMYTRYAEKRGWSVNIQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI V    EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHLPTGITVNMQDEKSQIQNRASALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 361


>gi|24638154|sp|Q8ZHK4|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92]
          Length = 366

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E + +  I++ I   +Q  ++   L  + 
Sbjct: 29  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVSGLLELA 88

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +      +A  + +     ++ +  +     D  +C L+++AG+GG+EA 
Sbjct: 89  VEADDEETFNET-----IAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEAQ 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 144 DWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 204 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    + K  IG G  
Sbjct: 264 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWG-- 321

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 322 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364


>gi|317011921|gb|ADU82529.1| peptide chain release factor 1 [Helicobacter pylori Lithuania75]
          Length = 352

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEG 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIAHFQSQ 350


>gi|210134282|ref|YP_002300721.1| peptide chain release factor 1 [Helicobacter pylori P12]
 gi|238058714|sp|B6JPI0|RF1_HELP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|210132250|gb|ACJ07241.1| peptide chain release factor RF-1 [Helicobacter pylori P12]
          Length = 352

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 245/354 (69%), Gaps = 9/354 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
           + +  +++  +  R+ E+   +S +  +    KL   ++E ++I  I      Y    + 
Sbjct: 1   MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEG 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++   ++     D E+ +LA+ E+  +E +  ELE  I  LL+PKD +DDK+  LE+RA
Sbjct: 61  IKENKELLE----DKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+SR+KF
Sbjct: 117 GTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKF 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G GGQ VN
Sbjct: 177 EAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVN 236

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PT I V+   EKSQH+N+ +A+K+L+ARLY+ + +      + +RK Q+
Sbjct: 237 TTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQV 296

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           GSGDRSERIRTYN+ Q R+++HRINLTLY LE ++  G +D++INPL+   Q++
Sbjct: 297 GSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIAHAQSQ 350


>gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG
           19424]
          Length = 357

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 107/339 (31%), Positives = 170/339 (50%), Gaps = 15/339 (4%)

Query: 15  RFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  E+   + +    +   +   L +E   +  ++  +          ++L  +  +   
Sbjct: 25  RLDEVNGLLEDPDVWNNPKRAQDLGKEKKMLEGVVGVLGKLTDDLVGAEELFELAKEEGD 84

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +  +      A  K    +  ++ +  +     D  +  ++I+AG GG+EA  +   
Sbjct: 85  DDTLESIE-----ADVKGFEAVVADMEFRRMFSGEMDQANAFIDIQAGAGGTEACDWASM 139

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L R Y +Y   + +K EVL  S+ D  G K     I G   F  ++ E+GVHR+ R    
Sbjct: 140 LLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRLVRKSPF 199

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           ++SG  HTS ++V V PE     +V+I   D+R+DT RASG+GGQH+N TDSAVRITHIP
Sbjct: 200 DSSGGRHTSFSSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTDSAVRITHIP 259

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V   +++SQH+NR  AM +L++RLY+ E ++   E       K  +G G    +IR
Sbjct: 260 TGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWG---HQIR 316

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 317 SYVLDQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355


>gi|123969269|ref|YP_001010127.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           AS9601]
 gi|229470358|sp|A2BTA9|RF1_PROMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123199379|gb|ABM71020.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
           AS9601]
          Length = 364

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 227/353 (64%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E+++++    +   KL     E + + P++   +      +E +D   
Sbjct: 9   RLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKN 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ ++ +D E+  L   E++ +E+   EL  +    LLPKD  D++S +LEIRAG GG+E
Sbjct: 69  LLKENRNDKEMESLINEELINLEEIKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V+ +S+S++D GG+KE+V ++ G  V+S++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ + T R+ G+GGQ+VN  ++A+
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPIDLEVGTARSGGAGGQNVNKVETAI 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ K    +  + R  Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYNF   R TDHR+  + + LE +L G +D++I+  +   Q +M+   +
Sbjct: 309 EKIRTYNFKDNRTTDHRLG-SNFSLEPILAGQLDEVIDACIAQEQKRMMEDFN 360


>gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
 gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           31758]
 gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92]
 gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
 gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM 10]
 gi|166977375|sp|A7FF38|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
 gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           31758]
 gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
 gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 365

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E + +  I++ I   +Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +      +A  + +     ++ +  +     D  +C L+++AG+GG+EA 
Sbjct: 88  VEADDEETFNET-----IAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    + K  IG G  
Sbjct: 263 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|26553517|ref|NP_757451.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
 gi|32171558|sp|Q8EWY5|RF1_MYCPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|26453523|dbj|BAC43855.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
          Length = 359

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 156/359 (43%), Positives = 231/359 (64%), Gaps = 8/359 (2%)

Query: 3   FLSHKQICD----LKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
            + ++++ +    ++ +F ++   +     SV    ++ +     +PI+ K   Y +   
Sbjct: 1   MIYNEKLYNSLLSMEEKFNDLNKELETEGLSVKRMSEINKSIKETTPIVEKFKEYKRTLN 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +I     D+EI +LAQ+E+   +  I + E E+  LLLPKD +DDK+ I+E+R
Sbjct: 61  DIDSAEKLIK-SEKDNEIIELAQLELSEKKPLIEKYEYELKVLLLPKDPNDDKNVIVEMR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG E+++FVGDLF  Y+RYA    WKV++L   ++   GY  I   I+G  V+S+MK
Sbjct: 120 PAAGGDESSIFVGDLFSAYKRYADSLGWKVKMLEVQESSH-GYGFISFMINGENVYSKMK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQRVPATE+ GRVHTS  TVAVLPE  E+++ I   D++IDT RASG+GGQH+
Sbjct: 179 FESGVHRVQRVPATESKGRVHTSTITVAVLPELEEVELVINNSDLKIDTYRASGAGGQHI 238

Query: 238 NTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N T+SAVRITHIPTG  +     KSQ +NR  AMK+LRA+L++ + +      S  RK Q
Sbjct: 239 NKTESAVRITHIPTGIFVACQEGKSQIENRETAMKMLRAKLWEKKEEENRKNISDLRKGQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +G+G+R+E+IRTYN+ Q R+TDHRINLTL KL+ V+ G + +II+ L++  +A  +  A
Sbjct: 299 VGTGERAEKIRTYNYPQNRVTDHRINLTLNKLDNVMLGNLSEIIDSLISHDEAVKMQEA 357


>gi|39938500|ref|NP_950266.1| protein chain release factor A [Onion yellows phytoplasma OY-M]
 gi|81565140|sp|Q6YRK0|RF1_ONYPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39721609|dbj|BAD04099.1| protein chain release factor A [Onion yellows phytoplasma OY-M]
          Length = 351

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 141/351 (40%), Positives = 218/351 (62%), Gaps = 2/351 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
              ++  +K ++ +++  +    +++  I + +  + + P +   + Y   + E   + T
Sbjct: 1   MLDRLKIIKQKYQDLQKLLLNEQNINQKIDILKNLSKLEPTVELFNRYLNLETEFTQIQT 60

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+  LA  E   I  E +   +++  LLLP+D  D K+ +LEI+  +GG+E
Sbjct: 61  ILK-TQQDQELLLLAHQEKDTILSEKKTTLDQLKILLLPQDPFDKKNVVLEIKGASGGNE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF  DL R Y +YA  +KWKVE+L+ + +  GG   +   ISG+ ++S +K+ESGVHR
Sbjct: 120 ANLFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGVHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATEA GR+HTS A V V+PEA E+++ I   DIR DT  +SG GGQ VNTT SAV
Sbjct: 180 VQRVPATEAQGRIHTSTAVVLVVPEAEELELKIDWHDIRTDTFNSSGPGGQSVNTTKSAV 239

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIP+GI +     KSQH+N+ +A  +L+ R+Y+        E + +RK  +G+G+RS
Sbjct: 240 RLTHIPSGISVACQEGKSQHENKDKAFTILKTRIYNQMLTAKQEEENKHRKNLVGTGERS 299

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           E+IRTYN+ Q RITDHRI LTL KL+ +++G +D +I PL+   Q + +  
Sbjct: 300 EKIRTYNYPQNRITDHRIGLTLQKLDIIMEGKLDLVIEPLIHEAQKEQLAQ 350


>gi|255079106|ref|XP_002503133.1| predicted protein [Micromonas sp. RCC299]
 gi|226518399|gb|ACO64391.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 225/354 (63%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++   +    E+  R+++         + KL++    ++ ++   + Y + + EE D  
Sbjct: 9   KKLESSERTHKELTFRLADPDVASDAKEFQKLSKALGELTGVVDMYARYKECQAEEADAR 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D+E+  +A+ E+ A++ E+ ELE ++   LLPKD  DDK+ +LEIRAGTGG 
Sbjct: 69  EMVKDAAGDAEMEAMAREEIAALKGEMDELEEKMTIALLPKDPLDDKNIMLEIRAGTGGD 128

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA ++ GDL+RMY+RYA  + W   +LSS+  D GGYKEIV  I+G  V+S +K+E+GVH
Sbjct: 129 EAGIWAGDLWRMYQRYAQSKGWSATILSSNAADFGGYKEIVVEINGDSVYSELKWEAGVH 188

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GRV TS ATVAV+PE  E++V I  +DI I + R+ G+GGQ+VN  ++A
Sbjct: 189 RVQRVPATESQGRVQTSTATVAVMPEVDEVEVKIDDKDIEISSARSGGAGGQNVNKVETA 248

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           + + H PTGI +  + E++Q +NR+RA ++LRA+L++++ +    E +  RK Q+GSG R
Sbjct: 249 IDLLHKPTGIRVFCTEERTQLKNRIRAFQILRAKLFEIQLEEQQKEIAGRRKAQVGSGAR 308

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R++DHR+    + L+  + G I   I       Q + +   +
Sbjct: 309 SEKIRTYNWKDSRVSDHRLG-QNFPLDNFIGGDIGPAIGGCQAMEQQEKLEELN 361


>gi|261820184|ref|YP_003258290.1| peptide chain release factor 2 [Pectobacterium wasabiae WPP163]
 gi|261604197|gb|ACX86683.1| hypothetical protein Pecwa_0864 [Pectobacterium wasabiae WPP163]
          Length = 365

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEVIVDTIDQLAQGLEDVAGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    + +          +     ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEEDDEDTFNETS-----LELDVLENKLGQLEFRRMFSGQYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  + PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|157414134|ref|YP_001485000.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9215]
 gi|238686831|sp|A8G733|RF1_PROM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157388709|gb|ABV51414.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9215]
          Length = 364

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 145/342 (42%), Positives = 224/342 (65%), Gaps = 5/342 (1%)

Query: 16  FAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           F  +E+++++    +   KL     E + + P++   +      +E +D   ++ ++ +D
Sbjct: 17  FENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNLLKENRND 76

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E+  L   E++ +E+   EL  +    LLPKD  D++S +LEIRAG GGSEA ++ GDL
Sbjct: 77  KEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGSEACIWAGDL 136

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMYERY     W V+ +S+S++D GG+KE+V ++ G  V+S++KFE+GVHRVQRVPATE
Sbjct: 137 ARMYERYGQKVGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQRVPATE 196

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           + GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++A+ + H PTG
Sbjct: 197 SQGRVHTSTATVAVMPEADPVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDLLHKPTG 256

Query: 253 I-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           I +  + E+SQ QNR RAM++LRA+LY+++ K    +  + R  Q+G+GDRSE+IRTYNF
Sbjct: 257 IRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTGDRSEKIRTYNF 316

Query: 312 SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
              R TDHR+  + + LE +L G +D++IN  +   Q +M+ 
Sbjct: 317 KDNRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQKRMLE 357


>gi|269103439|ref|ZP_06156136.1| peptide chain release factor 2 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163337|gb|EEZ41833.1| peptide chain release factor 2 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 347

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 175/343 (51%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E A++  ++  I   DQ   + + L  + 
Sbjct: 10  DAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVDDVEGLLELA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        ++          E+     ++ +  +     D   C L+++AG+GG+EA 
Sbjct: 70  VEAEDQETFDEIEPE-----LAELEAKLAKLEFRRMFSGDHDGSDCYLDLQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+A  + +K EV+  S+ D  G K     ISG   +  ++ E+GVHR+ 
Sbjct: 125 DWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRISGEYAYGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  V PE    ID+DI   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 185 RKSPFDSGGRRHTSFASAFVYPEVDDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT  +V   +++SQH+N+ +AMK L+A+L+++E ++   E+    + K  IG G  
Sbjct: 245 ITHIPTNTVVQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDSKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 303 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344


>gi|224437763|ref|ZP_03658710.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
 gi|313144209|ref|ZP_07806402.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
 gi|313129240|gb|EFR46857.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
          Length = 354

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 172/358 (48%), Positives = 243/358 (67%), Gaps = 9/358 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  +  R+ EI   +        V    +L++E + I PI+    +Y    +   
Sbjct: 1   MLVDKLKPIVARYDEISSLLLSQEILSSVKQLTQLSKEQSDIEPIVQSAKMYFSVLEGIA 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++     D E+ +LA+ E+  +E +  ELE EI  LL+PKD +D K+  LEIRAGT
Sbjct: 61  DNRALLE----DKELGELAKEELKELESKKAELEEEIKLLLIPKDPNDSKNIYLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N+ GGYKE++A I G+G +S++K+E 
Sbjct: 117 GGDEAGIFVGDLFKAYCRYADLQKWKVEIISSSENNVGGYKEVIALIKGQGSYSKLKYEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GR+HTSA TVA++PE  +++V+I   D++ID  R+ G GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVNINPSDLKIDVFRSGGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI V+   EKSQH+N+ +A+K+L+ARLY+ E +    +    RK Q+GS
Sbjct: 237 DSAVRITHIPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQNAQNKEARKTQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYN+ Q R+TDHRI LTLY LE ++ G  +D+ INPL+   Q++ +G+  
Sbjct: 297 GDRSERIRTYNYPQNRLTDHRIGLTLYSLEEIMLGGLLDECINPLIAHAQSQAMGAVE 354


>gi|254526537|ref|ZP_05138589.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537961|gb|EEE40414.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9202]
          Length = 364

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 144/342 (42%), Positives = 224/342 (65%), Gaps = 5/342 (1%)

Query: 16  FAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           F  +E+++++    +   KL     E + + P++   +      +E +D   ++ ++ +D
Sbjct: 17  FENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNLLKENRND 76

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E+  L   E++ +E+   EL  +    LLPKD  D++S +LEIRAG GG+EA ++ GDL
Sbjct: 77  KEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGDL 136

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMYERY     W V+ +S+S++D GG+KE+V ++ G  V+S++KFE+GVHRVQRVPATE
Sbjct: 137 ARMYERYGQKIGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQRVPATE 196

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           + GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++A+ + H PTG
Sbjct: 197 SQGRVHTSTATVAVMPEADPVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDLLHKPTG 256

Query: 253 I-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           I +  + E+SQ QNR RAM++LRA+LY+++ K    +  + R  Q+G+GDRSE+IRTYNF
Sbjct: 257 IRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTGDRSEKIRTYNF 316

Query: 312 SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
              R TDHR+  + + LE +L G +D++IN  +   Q +M+ 
Sbjct: 317 KDNRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQKRMLE 357


>gi|320008549|gb|ADW03399.1| peptide chain release factor 1 [Streptomyces flavogriseus ATCC
           33331]
          Length = 358

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 215/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI+S    + Q   +     
Sbjct: 3   EAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRSWKQTGDDIGTAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D             EV  +EK+  E+  ++  LL+P+D  DDK  +LEI+AG GG 
Sbjct: 63  EFAADDPD-------FAAEVKVLEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +RMK+E GVHRVQRVP+TE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG G
Sbjct: 176 ARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEEVDVEIHANDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +AM++LR+RL    ++    E S  
Sbjct: 236 GQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDV 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 347


>gi|332288942|ref|YP_004419794.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
 gi|330431838|gb|AEC16897.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
          Length = 351

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 180/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +   R  E+   + +    +   K   L +E +++  +++ I    Q   +   L  + 
Sbjct: 14  DNKVERLEEVSAELEQPDVWNDPEKAQALGKERSSLEAVVNTIKSLQQGLDDVDGLLELA 73

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +  +   +       A   ++ +   ++ +  +    +D   C ++++AG+GG+EA 
Sbjct: 74  IEADDQATFDEAV-----AELDQLEQSLAKLEFRRMFSGANDAADCYVDLQAGSGGTEAQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ 
Sbjct: 129 DWTEMLLRMYLRWAESKGFKAELMEVSDGDVAGIKSATIRVSGEYAFGWLRTETGIHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS + V V PE  +  D++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 189 RKSPFDSNNRRHTSFSAVFVYPEINDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+N+ +AMK L+A+LY++E K+   E+      K  IG G  
Sbjct: 249 ITHMPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELKKKNAEKQALEESKSDIGWG-- 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 307 -SQIRSYVLDDARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|307327906|ref|ZP_07607088.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu
           4113]
 gi|306886424|gb|EFN17428.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu
           4113]
          Length = 359

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 215/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E R+++           +L + YA ++P+I+    + Q  ++ +   
Sbjct: 3   EAVEELIGEHADLEKRLADPAVHADQREARRLNKRYAELTPVIAAYRAWKQAGEDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D     E            E+    L + +  LL+P+D  DDK  ILE++AG GG 
Sbjct: 63  ELAQDDPDFVEEAKEL-------EQSREGLTDRLRLLLVPRDPSDDKDIILEVKAGEGGE 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E+L ++++D GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEILDANESDLGGYKDVQVAVKTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E++V+I   D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVEVEIGPNDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI+V   +EKSQ QN+ +A+++LR+RL    ++    E S  
Sbjct: 236 GQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSERIRTYN+ + RI+DHR+    Y L+ VL G ++ +I   +
Sbjct: 296 RRSQVRTVDRSERIRTYNYPENRISDHRVGFKAYNLDQVLDGELEPVIQACV 347


>gi|216263966|ref|ZP_03435960.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
 gi|215980010|gb|EEC20832.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
          Length = 357

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 248/355 (69%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++  + +R   IE ++ +   +    K ++   EY  +  I +K   Y+    +  
Sbjct: 1   MFLEKLNSVTSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYENILNQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++       E+++L + E++ ++K+   LE+EI  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DNKTILEKEEQ-QEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSNNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL    Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDQLLDPLTIELQEQTLKS 354


>gi|213691478|ref|YP_002322064.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|254790863|sp|B7GP74|RF1_BIFLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|213522939|gb|ACJ51686.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457551|dbj|BAJ68172.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 362

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 203/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+    V   D   KL   +A +  I+     + Q K +      + G+  
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKTWLQVKDDLAAAQEMAGEDA 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+  +E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLEAELPGVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V V S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 127 DLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI V    EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 361


>gi|23466257|ref|NP_696860.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705]
 gi|227546609|ref|ZP_03976658.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239621640|ref|ZP_04664671.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312134004|ref|YP_004001343.1| prfa [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482079|ref|ZP_07941103.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689793|ref|YP_004209527.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691739|ref|YP_004221309.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|81753501|sp|Q8G3P5|RF1_BIFLO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23327005|gb|AAN25496.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705]
 gi|227212926|gb|EEI80805.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239515515|gb|EEQ55382.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291516325|emb|CBK69941.1| bacterial peptide chain release factor 1 (bRF-1) [Bifidobacterium
           longum subsp. longum F8]
 gi|311773307|gb|ADQ02795.1| PrfA [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916438|gb|EFV37836.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456595|dbj|BAJ67217.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320461129|dbj|BAJ71749.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 362

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 203/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+    V   D   KL   +A +  I+     + Q K +      + G+  
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKAWLQVKDDLAAAQEMAGEDA 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+  +E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLEDELPGVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V V S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 127 DLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI V    EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 361


>gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225120|sp|A1JPL5|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 365

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I++ I   DQ   +   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEEIVTTIDQLDQGMDDVTGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    +     ++ +  +     D  +C L+++AG+GG+EA 
Sbjct: 88  IEADDEETFNEAV-----AELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    + K  IG G  
Sbjct: 263 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|297157199|gb|ADI06911.1| peptide chain release factor 1 [Streptomyces bingchenggensis BCW-1]
          Length = 356

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 146/349 (41%), Positives = 215/349 (61%), Gaps = 18/349 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E R+++        +   L + YA ++PI+     + Q  ++ +   
Sbjct: 3   EAVEELIGEHADLEKRLADPAVHADQREATRLGKRYAELTPIVGTYRSWKQTGEDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +       ++            E    EL + +  LL+P+D  DDK  ILE++AG GG 
Sbjct: 63  ELAQLDADFADEVKEL-------EARREELTDRLRLLLVPRDPSDDKDVILEVKAGEGGE 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRM 176
           E+ALF GDL RMY RYA    WK E++ ++++D GGYK++   +        G+GV++R+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDANESDLGGYKDVQVAVKAKSNAEPGQGVWARL 175

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E++V+I   D+RID  R+SG GGQ 
Sbjct: 176 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVEVEISQNDLRIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QN+ +A+++LR+RL    ++    E S  R+ 
Sbjct: 236 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           Q+ + DRSERIRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 QVRTVDRSERIRTYNFPENRISDHRVGFKAYNLDQVLDGELDPVIQACV 344


>gi|285017297|ref|YP_003375008.1| peptide chain release factor 1 (rf-1) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283472515|emb|CBA15020.1| probable peptide chain release factor 1 (rf-1) protein [Xanthomonas
           albilineans]
          Length = 361

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 165/340 (48%), Positives = 233/340 (68%), Gaps = 10/340 (2%)

Query: 24  SESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQ 80
           S+   V     +   + E+A + P+ + ++     K        +      D E+R+LA+
Sbjct: 24  SDPEVVSDHQRFRDYSREFAQLQPVATALAEETAAKANLASAEAMRA----DPELRELAE 79

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
            E+ A +  + +L+ ++  LL+P+D  DD +  LE+RAGTGG EAA+F GDLFRMY RYA
Sbjct: 80  EEIAAAQAHLADLDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYA 139

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + WKVEV S +  + GGYKEIVA I GRG +S++KFESG HRVQRVPATE+ GR+HTS
Sbjct: 140 ERQGWKVEVESDNPGEHGGYKEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTS 199

Query: 201 AATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
           AATVA++PEA +++   +   D++IDT R+SG+GGQHVN T+SA+RITH+P+G++V   +
Sbjct: 200 AATVAIIPEADDVEEIAVNPADLKIDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQT 259

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITD 318
           E+SQH NR +A+K L+A+L D ER + A   + +RKLQ+GSGDRS+RIRTYNF QGRITD
Sbjct: 260 ERSQHANRDKALKRLKAQLLDAERNKQAAAEAQDRKLQVGSGDRSQRIRTYNFPQGRITD 319

Query: 319 HRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           HR+  LTLY L +V++G +D +I  L   HQ   +   S+
Sbjct: 320 HRVEGLTLYDLPHVIEGDLDALIERLSHEHQVDALARLSD 359


>gi|317125570|ref|YP_004099682.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium
           calvum DSM 43043]
 gi|315589658|gb|ADU48955.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium
           calvum DSM 43043]
          Length = 359

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 148/364 (40%), Positives = 221/364 (60%), Gaps = 19/364 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + +  + + +A++E R+++            L + YAA+ P ++    +   + + + 
Sbjct: 1   MLESVQAILDEYADLEARLADPAVHADQDLVRTLNKRYAALGPTVASARAWQTARDDVEA 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  +             EV A+E  + E E  +   L+P+D DDD+  ILE++AG G
Sbjct: 61  ARELGAED-------AAFAAEVPALEGVLAETEEHLLRQLVPRDPDDDRDVILEVKAGEG 113

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG--------VF 173
           G E+ALF GDL RMY RYA  R W+  V  ++++D GGYK++  +I  RG         +
Sbjct: 114 GEESALFAGDLLRMYLRYAERRGWRTVVEDATESDLGGYKDVRVSIRSRGHQPGPGEAPW 173

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVP TE+ GRVHTSAA V V+PEA E++V I   D+RID  R+SG G
Sbjct: 174 ARLKYEGGVHRVQRVPVTESQGRVHTSAAGVLVMPEAEEVEVTIDPHDLRIDVYRSSGPG 233

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++V   +EKSQ QN+  A++VLRARL+ + +     E SA 
Sbjct: 234 GQSVNTTDSAVRITHLPTGLVVSCQNEKSQLQNKEAALRVLRARLHQLAKDEADAEASAA 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           R+ Q+ + DRSERIRTYNF + RI+DHR     Y L++V+ G +D ++   + A +A  +
Sbjct: 294 RRSQVRTVDRSERIRTYNFPENRISDHRTGYKSYNLDHVIDGDLDPVVQSAIDADEAAKL 353

Query: 353 GSAS 356
            + +
Sbjct: 354 AALA 357


>gi|297828437|ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327940|gb|EFH58360.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 410

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 162/359 (45%), Positives = 245/359 (68%), Gaps = 3/359 (0%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           ++ +  +++  +++R A ++  +++   S + + +  +E   +   +  I+    K++E 
Sbjct: 49  LIKIMDQRLSAIEHRNALLQKLINQPEYSPEEFSRANKELRKLRDSMFLINDLRAKQKEI 108

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L +++ + + D ++ D+A  E+    +E + L+  +   LLPKD  D++ CILE+RAG
Sbjct: 109 DGLKSLVSESSDDKDMLDMAVSELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVRAG 168

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA+LF  D+FRMYERY+  + WK +++  +++D  GYKE  A I G  V+ ++KFE
Sbjct: 169 TGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESDMKGYKEASAAICGASVYGKLKFE 228

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG+HRVQR+P TE SGR+HTSA +VA+LP+A E+DV +  ED+RIDT R+ GSGGQH NT
Sbjct: 229 SGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANT 288

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRI H+PTG+MV+   E+SQH NR +A+KVL ARLY++ER R+ + RS  R  QIG
Sbjct: 289 TNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQIG 348

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           SGDRS RIRTYNF QGR+TDHR+ +TL+ +E ++QG  +D  I+ LL   +   I S S
Sbjct: 349 SGDRSGRIRTYNFPQGRVTDHRVGITLHAIEDMMQGEILDSFIDALLLRQEMDAIASFS 407


>gi|254387523|ref|ZP_05002762.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|294815090|ref|ZP_06773733.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|326443452|ref|ZP_08218186.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|197701249|gb|EDY47061.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|294327689|gb|EFG09332.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
          Length = 356

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 147/349 (42%), Positives = 215/349 (61%), Gaps = 18/349 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + DL    A +E ++++           KL++ YA ++PI+     +    ++     
Sbjct: 3   EAVEDLIGEHAGLEKQLADPSVHADQANARKLSKRYAELTPIVGTYRSWKLTGEDIDTAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +E+   EL  ++  LL+P+D  DDK  ILE++AG GG 
Sbjct: 63  ELAADDPD-------FAAEVKELEQRREELTEKLRLLLVPRDPSDDKDVILEVKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVFSRM 176
           E+ALF GDL RMY RYA    WK E+++S++++ GGYK++   +         +GV++R+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIINSTESELGGYKDVQVAVKTKGNAEPGQGVWARL 175

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+E GVHRVQRVPATE+ GR+HTSAA V V PEA EIDV+I   D+RID  R+SG GGQ 
Sbjct: 176 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEIDVEINPNDLRIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG++    +EKSQ QN+ +AM++LR+RL    ++    E +  R+ 
Sbjct: 236 VNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEKEAADARRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 QVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 344


>gi|123966944|ref|YP_001012025.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9515]
 gi|229470357|sp|A2BYQ7|RF1_PROM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123201310|gb|ABM72918.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9515]
          Length = 364

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 228/354 (64%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++      F  +E+++++    +   KL    +E A + P++   +      +E  D   
Sbjct: 9   RLKTASKSFVNLEMQLADPDIANNPKKLELIAKERAKLEPLVLDFNQLLDTDKEIDDSRQ 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D+ +D ++  L   E+  +E     L  ++   LLPKD  D++S +LEIRAG GG+E
Sbjct: 69  LLKDNRNDKDMELLINEELCNLEVLKNSLIQKVTIALLPKDPRDERSVMLEIRAGAGGNE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V+ +S+S++D GG+KE+V +I G  V+S++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKIGWSVKPISASESDMGGFKELVISIKGDSVYSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++A+
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPSDLEIGTARSGGAGGQNVNKVETAI 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ K   ++  + R +Q+G+GDRS
Sbjct: 249 DLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANDKERSQRLMQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYNF   R TDHR+  + + LE +L G +D++I+  +   Q +++   +E
Sbjct: 309 EKIRTYNFKDNRTTDHRLG-SNFALEPILAGQLDEVIDACIAQEQKRIMEDFNE 361


>gi|289706369|ref|ZP_06502727.1| peptide chain release factor 1 [Micrococcus luteus SK58]
 gi|289556864|gb|EFD50197.1| peptide chain release factor 1 [Micrococcus luteus SK58]
          Length = 369

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 147/369 (39%), Positives = 209/369 (56%), Gaps = 16/369 (4%)

Query: 1   MVFLSHKQ--ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQK 55
           M     ++  +  L     E+  R+S+           +L   +A +  +++    +   
Sbjct: 1   MFDSEQRREAVDRLLAEHRELTARLSDPAVHQDPALARRLNRRFAELGAVVTAHRAWSAA 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
            +E  D   +    + D+         + A E E       +  LL+P+D DD +  ILE
Sbjct: 61  VEELADARELAAAGDDDAAAFAAEVPGLEAAEAEAA---ERLRRLLIPRDPDDARDVILE 117

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SG 169
           I+ G GG EAALF GDL RMY RYA  R WK EVLS++ +D GGYK++   +        
Sbjct: 118 IKGGEGGEEAALFAGDLLRMYLRYAESRGWKTEVLSATHSDLGGYKDVHVAVRGSAADPA 177

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMR 228
            GV++R+KFE GVHRVQRVP TE+ GR+HTSAA V VLPE     +V +   D+++D  R
Sbjct: 178 DGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPNDLKVDVFR 237

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           +SG GGQ VNTTDSAVR+TH+PTGI+V+  +EKSQ QNR  A++VLR+RL + +R     
Sbjct: 238 SSGPGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRLLERQRAEQDA 297

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           E SA R  Q+ + DRSERIRTYNF + RI DHR     + L+ VL G ++ +I   L   
Sbjct: 298 EDSAARAAQVRTMDRSERIRTYNFPENRIADHRTGYKAHNLDAVLDGDLEAVIASCLALD 357

Query: 348 QAKMIGSAS 356
           + + + +  
Sbjct: 358 EERRLAALG 366


>gi|296454711|ref|YP_003661854.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184142|gb|ADH01024.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 362

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 203/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+    V   D   KL   +A +  I+     + Q K +      + G+  
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKTWLQVKDDLAAAQEMAGEDA 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+ + E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLEAELPDAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V V S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 127 DLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI V    EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 361


>gi|227832889|ref|YP_002834596.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262182622|ref|ZP_06042043.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254790875|sp|C3PFQ4|RF1_CORA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|227453905|gb|ACP32658.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 358

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 147/358 (41%), Positives = 213/358 (59%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  IE++M++         + KL++ YA + PI++      Q +Q+  D   +
Sbjct: 8   VDDIISEYQGIEMQMADPEVAGDQSQFRKLSKRYAELRPIVAVNEELVQARQDLADAKEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +      D        +E  + +LE ++  LL P+D  D +  I+EI+AG GG EA
Sbjct: 68  AYEDHEFQSEVD-------RLEPLVVQLEEQLADLLAPRDEHDSEDIIMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMYER+A    ++ EVL  +++D GG K++  +   +       +S  KFE 
Sbjct: 121 ALFAGDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  EID  +I  +DIR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPEEIDSVNIDDKDIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QN+ RA++VL+ARL  +ER+    E    R  Q+ 
Sbjct: 241 TDSAVRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSERIRTYN+ + RITDHRI      L+ VL G + D+I  L    +A+ + +  
Sbjct: 301 TMDRSERIRTYNWPENRITDHRIGYKANNLDSVLDGDMQDLIEALQAQERAERLEAEG 358


>gi|21223720|ref|NP_629499.1| peptide chain release factor 1 [Streptomyces coelicolor A3(2)]
 gi|256785187|ref|ZP_05523618.1| peptide chain release factor 1 [Streptomyces lividans TK24]
 gi|289769080|ref|ZP_06528458.1| peptide chain release factor 1 [Streptomyces lividans TK24]
 gi|20139352|sp|Q9K4E4|RF1_STRCO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|8568782|emb|CAB94531.1| peptide chain release factor 1 (RF-1) [Streptomyces coelicolor
           A3(2)]
 gi|289699279|gb|EFD66708.1| peptide chain release factor 1 [Streptomyces lividans TK24]
          Length = 358

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 149/352 (42%), Positives = 216/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI++    + Q   + +   
Sbjct: 3   EAVEELVAEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRSWKQTGDDMETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D             EV  ++K+  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  EFAADDPD-------FAAEVKELDKQRDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERIGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA EIDV+I   D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEIDVEINPNDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITHIPTG++    +EKSQ QN+ +AM++LR+RL    ++    E +  
Sbjct: 236 GQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEKEAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLDSVIQACV 347


>gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1]
 gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium
           petroleiphilum PM1]
          Length = 355

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +   R +E+   + +    +       L  E  ++  ++  I+  ++   +  +L+ + 
Sbjct: 18  DEKSRRLSEVNAALEDPTVWNDPKNAQALGREKKSLETVVDTIASLERNLADNAELYEMS 77

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +     + E L +  ++ +LE    +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 78  KEE-GDEDGLRAIEAETLGLAAQVEQLE----FRRMFSNPADPSNCFIDIQAGAGGTEAC 132

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +Y   + +K  +   ++ D  G K     + G   F  ++ E+GVHR+ 
Sbjct: 133 DWASMLLRQYLKYCERKGFKATIEDETEGDTAGIKSATIKVEGDYAFGHLRTETGVHRLV 192

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE  +  +++I   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 193 RKSPFDSSGGRHTSFASLFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVR 252

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V     +SQH NR  A K LR+RLYD E ++   E+    + K  +G G  
Sbjct: 253 LTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDTKTDVGWG-- 310

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 311 -HQIRSYVLDNSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 353


>gi|300718200|ref|YP_003743003.1| peptide chain release factor 2 [Erwinia billingiae Eb661]
 gi|299064036|emb|CAX61156.1| Peptide chain release factor 2 [Erwinia billingiae Eb661]
          Length = 348

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +       D    L +E +++  I+  +   +Q  ++ + L  + 
Sbjct: 11  DAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAIVDTLDQMEQGLEDVRGLLELA 70

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +      +A    + +   E+ +  +     D   C ++I+AG+GG+EA 
Sbjct: 71  VEADDEETFNET-----IAELDVLEKKLGELEFRRMFSGEYDSADCYIDIQAGSGGTEAQ 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L RMY R+A  + +K E++  S+ +  G K     I G   F  ++ E+GVHR+ 
Sbjct: 126 DWAGMLVRMYLRWAEAKGFKTEIIEESEGEVAGTKSATLRIIGDYAFGWLRTETGVHRLV 185

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 186 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 245

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT  +    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 246 ITHLPTNTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQSLEDNKSDIGWG-- 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 304 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 346


>gi|108804488|ref|YP_644425.1| peptide chain release factor 1 [Rubrobacter xylanophilus DSM 9941]
 gi|119361598|sp|Q1AVG5|RF1_RUBXD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|108765731|gb|ABG04613.1| bacterial peptide chain release factor 1 (bRF-1) [Rubrobacter
           xylanophilus DSM 9941]
          Length = 364

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 150/351 (42%), Positives = 207/351 (58%), Gaps = 5/351 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +   R+ E+   +S+    +    Y ++  E++ +         + +  +EE++   +I
Sbjct: 10  KETVARYRELTEELSDPAIFNDQRRYAEVAREHSRMRRGAELSERFLEALREEREARELI 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               S  E    A     A  +     E   + L+     DD K  ILEIRAGTGG EAA
Sbjct: 70  PAAESAEEREFFAGEAREAGRRAGELAEEIRSELIDRDPNDD-KDVILEIRAGTGGDEAA 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF GDL+ MY RYA    ++  VL +S  + GGYKEI+  I G G +S  K E G HRVQ
Sbjct: 129 LFAGDLYEMYARYADRLGFRHRVLDASPAEVGGYKEIIVEIEGDGAYSVFKHEGGTHRVQ 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TE+ GR+HTS ATVAVLPEA E++V+I   D+ ID  R+SG GGQ VNTTDSAVRI
Sbjct: 189 RVPKTESQGRIHTSTATVAVLPEAEEVEVEINPNDLEIDVYRSSGPGGQSVNTTDSAVRI 248

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTG++V   +EKSQ QN+ +A+++LR+RL + E +         R  Q GSGDRS +
Sbjct: 249 THKPTGLVVTCQNEKSQLQNKEQALRILRSRLLEREMRERQEREGQMRLAQFGSGDRSAK 308

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           IRTYNF QGRITDHR+ LT++ LE VL G +++    L    +A  + +++
Sbjct: 309 IRTYNFPQGRITDHRVGLTVHNLEAVLGGELEEFTKALAAKERADRLAASA 359


>gi|119025459|ref|YP_909304.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154486885|ref|ZP_02028292.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis
           L2-32]
 gi|229470348|sp|A1A0I9|RF1_BIFAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118765043|dbj|BAF39222.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154084748|gb|EDN83793.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis
           L2-32]
          Length = 362

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 144/355 (40%), Positives = 204/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+E       D   KL   +A +  I+S  + Y Q K + +    +  +  
Sbjct: 14  EEYHNIEQQMAEPEVASNPDKMRKLGRRHAELGAIVSAYTAYKQVKDDLEAAREMASEDP 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+   E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLEGELPAAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V V S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 127 DLLRMYMRYAEKRGWSVTVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI V    EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHIPTGITVNMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 361


>gi|326403021|ref|YP_004283102.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301]
 gi|325049882|dbj|BAJ80220.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301]
          Length = 352

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 168/347 (48%), Positives = 233/347 (67%), Gaps = 5/347 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
               +++  +  R  E+   ++     + ++  + E A I P+  +I +    ++   + 
Sbjct: 1   MTLEQKLDRIVLRAEELRAMLAAGVDGERFVAASRELAEIEPVEQQILLLRAAERARDEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
                    D E+R+LA  E+ ++ + +  LE+EI   LLP+D  D++  ILEIR   GG
Sbjct: 61  EA----ARVDPELRELADAELDSLRETLPRLEHEIRLALLPRDAADERPAILEIRPAAGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  +LF  Y RYA LR W+ E+L  ++ + GG +E +A I+GR VF+R+KFESGV
Sbjct: 117 DEAALFAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAEITGRAVFARLKFESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE  GR+HTS  TVAVLPEA ++DV++   D+RID  RASG+GGQHVN T+S
Sbjct: 177 HRVQRVPATETQGRIHTSTVTVAVLPEAEDVDVEVNEADLRIDVFRASGAGGQHVNKTES 236

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQH+NR +AMK+LRARLY+  R   A  R+A+RK Q+G+GD
Sbjct: 237 AVRITHLPTGIVVAMQEERSQHKNRAKAMKILRARLYEQTRAAAAAGRAADRKSQVGTGD 296

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           RSERIRTYNF QGR+TDHRINLTL+K++ V+ G  D+II+ L    Q
Sbjct: 297 RSERIRTYNFPQGRVTDHRINLTLHKIDRVMLGEFDEIIDALTEEDQ 343


>gi|116671165|ref|YP_832098.1| peptide chain release factor 1 [Arthrobacter sp. FB24]
 gi|166223528|sp|A0JY78|RF1_ARTS2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116611274|gb|ABK03998.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter sp.
           FB24]
          Length = 357

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 144/362 (39%), Positives = 210/362 (58%), Gaps = 18/362 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  L +  A I+ ++ +           KL    A ++ I+     ++  + +     
Sbjct: 3   ESVQGLLDEHAAIQAQLGDPAVYADQKLARKLGRRSAQLNGIVEAYHRWESIRDDLAAAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D E          ++E    +L      LL+P+D DD ++ ILE++ G GG 
Sbjct: 63  EMADE---DPEFAAEVPELEASLETAAAKL----RRLLIPRDPDDARNVILEVKGGEGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           EAALF  DL RMY RYA  R WK E++S++++D GGYK++   +         GV++R+K
Sbjct: 116 EAALFAADLLRMYSRYAESRGWKTELISATESDLGGYKDVQMAVKGNSNDPAEGVYARLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FE GVHRVQRVP TE+ GR+HTSAA V VLPE  E +  +I   D++ID  R+SG GGQ 
Sbjct: 176 FEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR   M+VLRAR+   +++++  E SA RK 
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAENSAQRKS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + DRSERIRTYN+ + RI DHR     Y L+ V+ G ++ +I   +   +   + + 
Sbjct: 296 QIRTMDRSERIRTYNYPENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMDEQARLDAI 355

Query: 356 SE 357
            E
Sbjct: 356 GE 357


>gi|297243816|ref|ZP_06927746.1| protein chain release factor A [Gardnerella vaginalis AMD]
 gi|296888237|gb|EFH26979.1| protein chain release factor A [Gardnerella vaginalis AMD]
          Length = 365

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 202/355 (56%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             + +IE RM         DA  KL   +A +  I++    Y Q   + +  + +  D  
Sbjct: 17  EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASD-- 74

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D +  + A+     +     +L       L+P+D DD    I+EI+AGTGG EAALF G
Sbjct: 75  -DPDFAEEAKRLEEQLPAAKEKL----RTALIPRDPDDACDMIMEIKAGTGGEEAALFAG 129

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W   + S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 130 DLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVH 189

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 190 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 249

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 250 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 309

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  +  A
Sbjct: 310 DRSERIRTYNFPENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQADEADRLAQA 364


>gi|212716435|ref|ZP_03324563.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660688|gb|EEB21263.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM
           16992]
          Length = 383

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 205/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+E       D   KL   +A +  I+S  + Y Q K + +    +  +  
Sbjct: 35  EEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKDDLEAAKEMASEDP 94

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+   E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 95  DFAEEAK-------RLESELPAAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 147

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V V S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 148 DLLRMYMRYAEKRGWSVAVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVH 207

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 208 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVNTTY 267

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ +  A + +  R  Q+ S 
Sbjct: 268 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEEEAAQAADMRHSQVRSL 327

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 328 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 382


>gi|224531646|ref|ZP_03672278.1| peptide chain release factor 1 [Borrelia valaisiana VS116]
 gi|224511111|gb|EEF81517.1| peptide chain release factor 1 [Borrelia valaisiana VS116]
          Length = 357

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 249/355 (70%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++    ++   +E ++ +   +       K+ +EY  +  I +K   Y++   +  
Sbjct: 1   MFLEKLNSATSKIKSLEEKLQDINLIKNQKEYSKIIKEYTHLEKINTKKIEYEKILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++       E+++L + E++ ++K+  ++E++I  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DNKTILEKEEQ-QEMKELIKQELIDLDKKKEDIEHQIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E +++I  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIEINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PT I+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS+NRK Q+GS
Sbjct: 240 DSAVRITHLPTRIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL    Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDPLLDPLTIELQEQTLKS 354


>gi|304373116|ref|YP_003856325.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309307|gb|ADM21787.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1]
          Length = 361

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 156/362 (43%), Positives = 235/362 (64%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M       +  +K ++  +  ++ +     ++  Y K+ +E A+I  I+     Y ++  
Sbjct: 1   MEKSMLNSLNSIKEKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNYLKQVS 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +D   ++ +   D EI +LA+ E+    K+I E+E E+  LLLPKD +DDK+ I+EIR
Sbjct: 61  IIEDSKKLLQEK--DVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +FVGDL++MY ++A  +KW V+VL+SS    GG+ +IV  +SG  V+S++K
Sbjct: 119 GAAGGDEANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQR+P TE  GRVHTS  TV ++PE   +I VDI  +D+RIDT R+SG+GGQ 
Sbjct: 179 FESGVHRVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQS 238

Query: 237 VNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTG++  +   +SQ  N+  A+K+L++++Y++E ++        RKL
Sbjct: 239 VNTTDSAVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIEGQFRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             GSG RSE+IRTYN+ Q R+TDHRI+ +   L+ V+ G +D II+ LL   +A+ I ++
Sbjct: 299 A-GSGARSEKIRTYNYPQDRVTDHRISFSTS-LKNVIVGNLDPIIDALLAEDKAERIATS 356

Query: 356 SE 357
            E
Sbjct: 357 YE 358


>gi|282861117|ref|ZP_06270182.1| peptide chain release factor 1 [Streptomyces sp. ACTE]
 gi|282563775|gb|EFB69312.1| peptide chain release factor 1 [Streptomyces sp. ACTE]
          Length = 358

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 216/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++S+           KL + YA ++P+IS    + +   + +   
Sbjct: 3   EAVEELIGEHADLEKKLSDPSVHADQANARKLNKRYAELTPVISTYRAWKRTGDDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D             EV  +EK+  E+  ++  LL+P+D  DDK  +LEI+AG GG 
Sbjct: 63  EFAADDPD-------FAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +RMK+E GVHRVQRVP+TE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG G
Sbjct: 176 ARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEEVDVEIHANDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +AM++LR+RL    ++    E S  
Sbjct: 236 GQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDV 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 347


>gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT]
 gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus
           flagellatus KT]
          Length = 354

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 185/344 (53%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +    +      KL +E   +  +++ ++  +   ++ ++L  + 
Sbjct: 17  DTKQQRLEEVSQLLEDPNIWNDNERSQKLGKERRELEFVVNSLTEVENGVRDSRELFEMA 76

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N D  +R +      A  + + ++  E+ +  +     D  +C L+I+AG+GG+EA 
Sbjct: 77  REENDDDTLRSID-----ADTQALEKIVAEMEFRRMFSHPMDQNNCFLDIQAGSGGTEAQ 131

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RY   + +KVEVL  S+ D  G K     ISG   +  ++ ESGVHR+ 
Sbjct: 132 DWASMLLRMYLRYCENKGFKVEVLEESEGDVAGIKSASLKISGDYAYGFLRTESGVHRLV 191

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V V PE  +  V +I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 192 RKSPFDSGNRRHTSFASVFVYPEVDDSIVVEINPADLRIDTYRASGAGGQHINKTDSAVR 251

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AM +L+A+LY +E ++   E+ A    K  IG G  
Sbjct: 252 ITHLPTNTVVQCQNDRSQHRNKDEAMNMLKAQLYALELRKRNEEKQAMEDAKTDIGWG-- 309

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I+  L  
Sbjct: 310 -HQIRSYVLDQSRIKDLRTNVEVGNTQGVLDGDLDPFISESLKQ 352


>gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
 gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
          Length = 365

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +       D    L +E +A+  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLQEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +         +K        + +  +     D   C ++I+AG+GG+EA 
Sbjct: 88  VEAEDEDTFNEAVAELDGLDKKLGE-----LEFRRMFSGEYDSADCYMDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD +  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++V + PE    ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+N+ +A K LRA+LY+ E ++   ++  + + K  IG G  
Sbjct: 263 ITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R ++     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 363


>gi|225350887|ref|ZP_03741910.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158343|gb|EEG71585.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 362

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 205/353 (58%), Gaps = 20/353 (5%)

Query: 14  NRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M+E       D   KL   +A +  I+S  + Y Q K + +    +  +  
Sbjct: 14  EEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKDDLEAAKEMASEDP 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +E           +E E+  +E ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 74  DFAEEAK-------RLESELPAVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V + S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 127 DLLRMYMRYAEKRGWTVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ +  A + +  R  Q+ S 
Sbjct: 247 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEEEAAQAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLA 359


>gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
          Length = 386

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +       L  E  A+  ++  ++       +  +L  + 
Sbjct: 49  DAKAERLQVVNAELEDPAVWNDPKHAQDLGREKKALEDVVETLTGLGTGLADSNELFELA 108

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N D+   +  +++    ++++  LE    +  +  +  D  +C L+I+AG GG+EA 
Sbjct: 109 AADNDDA-TLESIELDANGFQEKLESLE----FRRMFSNPADPLNCFLDIQAGAGGTEAQ 163

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +YA  + +K EVL  S+ +  G K     + G   F  ++ E+GVHR+ 
Sbjct: 164 DWASMLLRQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGEYAFGYLRTETGVHRLV 223

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A+V V PE     +V++   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 224 RKSPFDSSGGRHTSFASVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVR 283

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V   +++SQH+NR  AM++L+++LY++E +    E+    + K  +G G  
Sbjct: 284 LTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWG-- 341

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 342 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 384


>gi|312139166|ref|YP_004006502.1| peptide chain release factor 1 prfa [Rhodococcus equi 103S]
 gi|325673529|ref|ZP_08153220.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707]
 gi|311888505|emb|CBH47817.1| peptide chain release factor 1 PrfA [Rhodococcus equi 103S]
 gi|325555550|gb|EGD25221.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707]
          Length = 359

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 145/356 (40%), Positives = 211/356 (59%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+    A +E ++++        A  K  + +A ++P+++  +     + +      +
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPVMATYAKLKSAQDDLDAAREL 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                  +        E+ A+E+ + EL+  +  LL P+D  D    +LE+++G GG E+
Sbjct: 70  -------AADDAAFAAEIPALEETVTELDKTLTDLLAPRDPHDGDDVVLELKSGEGGEES 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-----GRGVFSRMKFES 180
           ALF  DL RMY RYA    W+VE+L ++ +D GGYK+   +I        GV+SR+KFE 
Sbjct: 123 ALFASDLARMYVRYAERAGWRVEILDATVSDLGGYKDATISIKSKGDVRDGVWSRLKFEG 182

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V + PE  E++   I   D+RID  R+SG GGQ VNT
Sbjct: 183 GVHRVQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNT 242

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL     +    E SA R+ Q+ 
Sbjct: 243 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVR 302

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + RITDHRI    + L+ VL G ++ +++ L  A +   + +
Sbjct: 303 TVDRSERIRTYNFPENRITDHRIGFKAHNLDAVLDGDMEALLDALGKADREARLAA 358


>gi|217077770|ref|YP_002335488.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
 gi|217037625|gb|ACJ76147.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
          Length = 358

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 153/340 (45%), Positives = 219/340 (64%), Gaps = 10/340 (2%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
              +E ++S   + D     +E+Y+ +  I      Y + + E +             E+
Sbjct: 18  LKSLEEKLSSQLTPDQIRTYSEKYSKMKEIFQLAKEYLEIEDEIELWKE---------EM 68

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            +  + EV  ++K+  ++  ++  L+LP+     K+  LEIRAGTGG EAALF  DL RM
Sbjct: 69  PEGFEHEVEKLQKKQEDIMQDLISLVLPESEYSGKNVFLEIRAGTGGEEAALFAADLLRM 128

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y RY   + +K E++  +  D GGYKE+V  I G+ V + +K+ESGVHRVQRVP TE+ G
Sbjct: 129 YLRYVEKKNFKAEIVDENKTDLGGYKEVVIKIKGKNVGNLLKYESGVHRVQRVPTTESGG 188

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R+HTS ATVAVLPE + ++++I   DIRIDT RASG+GGQ+VN T+SAVRITHIPTGI+V
Sbjct: 189 RIHTSTATVAVLPEVSNVEIEINPSDIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVV 248

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
              SE+SQ QN+ +AM +LRARL+ ++ +    + S+NRK QIG+G+RSE+IRTYNF Q 
Sbjct: 249 TCQSERSQLQNKEQAMNILRARLFKLKLEEQERKISSNRKSQIGTGERSEKIRTYNFPQN 308

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           R+TDHRIN T Y L+ VL G +D+ I  L+     + + +
Sbjct: 309 RVTDHRINYTSYNLQAVLDGELDEFITRLMRIDMLEQLEN 348


>gi|114320956|ref|YP_742639.1| peptide chain release factor 2 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227350|gb|ABI57149.1| bacterial peptide chain release factor 2 (bRF-2) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 354

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 165/342 (48%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            + R  E+   + +    +       L  E A +  ++      D    +  +L  +  D
Sbjct: 19  KRERLEEVTRELEQPEVWNDPERAQSLGRERAQLEGLVETFERLDSVLGDADELLEMAAD 78

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +          + +   +      ++ +  +     D  +  ++I+AG GG+EA  +
Sbjct: 79  EGDEE-----TVAALQSDLGDCERELQKLEFRRMFSGEMDPANAFMDIQAGAGGTEAQDW 133

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+     +K E++  S+ D+ G K       G   F  ++ E G+HR+ R 
Sbjct: 134 ANMLLRMYLRWGERHGFKTEIIELSEGDEAGIKSATVKFEGEYAFGWLRTEIGIHRLVRK 193

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++  R HTS A+V V PE  +         D+R+D  RASG+GGQHVN T+SAVRIT
Sbjct: 194 SPFDSGNRRHTSFASVFVSPEVDDDVDIDINPADLRVDVYRASGAGGQHVNRTESAVRIT 253

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H+P+GI+V    ++SQH+NR  AMK L+++L+++E ++  +E  A    K  IG G+   
Sbjct: 254 HMPSGIVVQCQQDRSQHKNRATAMKQLKSKLFELEMQKRRDEAEAVEGTKSDIGWGN--- 310

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y   Q RI D R  + +   + VL G +D  I   L A
Sbjct: 311 QIRSYVLDQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLKA 352


>gi|159475365|ref|XP_001695789.1| peptide chain release factor [Chlamydomonas reinhardtii]
 gi|158275349|gb|EDP01126.1| peptide chain release factor [Chlamydomonas reinhardtii]
          Length = 383

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 140/358 (39%), Positives = 233/358 (65%), Gaps = 6/358 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++   +  F E+++RM++         + K+ +  + +   ++    Y   +Q+  D
Sbjct: 23  MVDKLRAAEMTFKELQMRMADPEVAASATEFQKVAKAASDLETTVNTYRAYQDTEQQLAD 82

Query: 62  LHTVIGDH-NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               + +  +SD E+ + A+ E+  +E  + +L++ +   L+P+D  DD++ +LEIRAG 
Sbjct: 83  AQKYLKEEASSDPEMAEFAREEIAELEASLTKLQDALRLQLVPRDPLDDRNIMLEIRAGA 142

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA+++ GDL RMY+RYA  + WK  ++S +  + GGYKEI+  I+G  V+S++K+E+
Sbjct: 143 GGDEASIWAGDLMRMYQRYANKQGWKASLVSCTQAEAGGYKEIILQINGDSVYSKLKWEA 202

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATEA+GRVHTS ATVAV+PE  E+DV + + DI +   RASG+GGQ+VN  
Sbjct: 203 GVHRVQRVPATEAAGRVHTSTATVAVMPEVEEVDVALNMNDIDLKFARASGAGGQNVNKV 262

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AV + H PTGI +    E++Q QN+ RA ++LRA+LY++E +R   E  A RK Q+G+
Sbjct: 263 ETAVDLMHKPTGIRVFCQEERTQAQNKERAFQILRAKLYELELQRQQAEIYAARKSQVGT 322

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSE+I+TYN+   R++DHRI +  + L  +++G ++D +  +++A Q + +   +E
Sbjct: 323 GDRSEKIKTYNYKDSRVSDHRIKMN-FDLNSIIEGDLEDTLQAMISADQQEKLKELAE 379


>gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
 gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
 gi|319768218|ref|YP_004133719.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
 gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
 gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
 gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
          Length = 367

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 182/347 (52%), Gaps = 16/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHT 64
            +   + R  E+E +M+     D         +    +  ++ + S  +++    +  + 
Sbjct: 26  DLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEVNALKDLVEEFSSLEERFDNLEVTYE 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D    +L +     ++             LL  +  D  + ILE+  G GG+E
Sbjct: 86  LLKEEPDDELQAELVEEAKKLMKDFSE-----FELQLLLNEPYDQNNAILELHPGAGGTE 140

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE L     ++ G K +   I G   +  +K E GVHR
Sbjct: 141 SQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHR 200

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +ASGR HTS  +  V+PE    I+++I  E+++IDT R+SG+GGQHVNTTDSA
Sbjct: 201 LVRISPFDASGRRHTSFVSCEVVPELDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSA 260

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VRITH+PTGI+V   SE+SQ +NR +AM +L+A+LY  + +    E +  R  Q  IG G
Sbjct: 261 VRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWG 320

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +   +IR+Y F     + DHR N+ +  ++ V+ G ID  I+  L A
Sbjct: 321 N---QIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRA 364


>gi|168036672|ref|XP_001770830.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677889|gb|EDQ64354.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 376

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 127/353 (35%), Positives = 217/353 (61%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +R+++    +    Y K+ +  A +  I      + + + +  D   
Sbjct: 17  KLDSAERTYKELSMRLADPDVANNNNEYQKIAKSLAELEEIYQTYQRFKECEAQLDDAKE 76

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   D E+ ++A  E   + +++ ELE ++  +LLP D  D ++ +LE+RAGTGG E
Sbjct: 77  MAKDAAGDREMAEMAAEEANILAQQVEELEEQLKVMLLPSDPLDSRNIMLEVRAGTGGDE 136

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMY++++    W+   +S ++ + GGYKE V  I+G  V+S++K+ESGVHR
Sbjct: 137 AGIWAGDLVRMYQKFSERNNWRCSPVSCTEAEKGGYKEFVLEITGERVYSKLKYESGVHR 196

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVA++PE  E++V I  +DI + T R+ G+GGQ+VN  ++A+
Sbjct: 197 VQRVPATESQGRVHTSTATVAIMPEVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 256

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ +N++RA ++LRA+LY+++ +         R+ Q+G+G RS
Sbjct: 257 DLFHKPTGIRIFCTEERSQLKNKIRAFQLLRAKLYEIKLREQQETIRNARQSQVGTGARS 316

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R++DHR  +  + L  VL G ++  +       Q +M+   +
Sbjct: 317 EKIRTYNYKDNRVSDHRTKIN-FDLTTVLNGELEGPVQSCAALEQKEMLEELA 368


>gi|319787948|ref|YP_004147423.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466460|gb|ADV28192.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
          Length = 360

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 164/336 (48%), Positives = 234/336 (69%), Gaps = 10/336 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M +      +  L+ E++ + P+ + ++   + +++      +      D E+ +LAQ E
Sbjct: 29  MGDPA---RFRDLSREFSQLEPVATALAAEARAREDLATAEAM----RDDPELAELAQEE 81

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           + A    + +L++E+  LL+PKD  D+ +  LE+RAGTGG EAALF GDLFRMY RYA  
Sbjct: 82  IAAARGRLEQLDHELALLLVPKDPRDEGNLFLEVRAGTGGDEAALFAGDLFRMYARYAER 141

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + WKVEV S +  + GG+KEIVA I GRG +S++KFESG HRVQRVPATE+ GR+HTSAA
Sbjct: 142 QGWKVEVESDNPGEHGGHKEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAA 201

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           TVA++PEA EI+       D+++DT R+SG+GGQHVN TDSA+RITH+P+G++V + +E+
Sbjct: 202 TVAIIPEADEIEEITINPADLKVDTFRSSGAGGQHVNKTDSAIRITHLPSGLVVESQTER 261

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR 320
           SQH NR +AMK L+A+L D ER +    ++ +R+LQ+GSGDRS+RIRTYNF QGRITDHR
Sbjct: 262 SQHANRDKAMKRLKAQLLDAERSKQQAAQAESRRLQVGSGDRSQRIRTYNFPQGRITDHR 321

Query: 321 I-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +  LTLY L  +L+G +D +++ L   HQA  +   
Sbjct: 322 VEGLTLYDLPNILEGDLDPLVSRLQQEHQADELARL 357


>gi|172087665|ref|YP_203835.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
 gi|229576704|sp|Q5E7P9|RF2_VIBF1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|171902260|gb|AAW84947.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
          Length = 365

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 178/343 (51%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E A++  ++  I + DQ  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDLLDQGVEDVDGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        ++          E+     ++ +  +     D   C +++++G+GG+EA 
Sbjct: 88  VEEEDQETFDEIEPE-----LAELEAKLAKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+A  + +KVEV+  S+ +  G K     I+G   +  ++ E+GVHR+ 
Sbjct: 143 DWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS A+  + PE  +   +DI   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 203 RKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPSDLRIDVYRASGAGGQHVNTTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PT I+V   +++SQH+N+ +AMK LRA+L++ E ++   E+ AN   K  IG G  
Sbjct: 263 ITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEYELQKQNAEKQANEDAKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362


>gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1]
          Length = 358

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 146/362 (40%), Positives = 215/362 (59%), Gaps = 16/362 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           ++ + +  L + +AE+E R+++   +       KL + YA + P++       Q +++  
Sbjct: 1   MASQSVDSLLDEYAELEQRLADPEVLADQVQARKLGKRYAQLGPVVRCARDLAQAREDRD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +  +  S +   D   + V+ +E E+         LL+P+D  D    ++E+++G 
Sbjct: 61  AARELASEDRSFAAEADALDVRVVELETELA-------ELLVPRDPHDSDDVLMEVKSGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG----VFSRM 176
           GG E+ALF GDL RMY RYA  R WKVE+L S+ +D GG+K++  ++  +      ++ +
Sbjct: 114 GGEESALFAGDLVRMYTRYAESRGWKVELLGSTPSDLGGFKDVTLSVRSKDPAQGAWAAL 173

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GR+HTSAA V V P+A E    +I  +DIR+D  RASG GGQ
Sbjct: 174 KFEGGVHRVQRVPVTESQGRIHTSAAGVLVFPDADETPDVEIDEKDIRVDVFRASGHGGQ 233

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+P+GI+V   +E+SQ QN+ RAM VLRARL        A   S  R+
Sbjct: 234 SVNTTDSAVRITHLPSGIVVSCQNERSQLQNKARAMDVLRARLQAKAEAEAAEAASEQRR 293

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            Q+ + DRSERIRTYNF + RI+DHR+    + L  VL G + D+   L  A +A+ +  
Sbjct: 294 SQVRTVDRSERIRTYNFPENRISDHRVGFKAHNLSSVLDGNLTDVFAALTAADRAEAMAG 353

Query: 355 AS 356
            S
Sbjct: 354 ES 355


>gi|33519808|ref|NP_878640.1| peptide chain release factor 1 [Candidatus Blochmannia floridanus]
 gi|81666793|sp|Q7VR74|RF1_BLOFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33504153|emb|CAD83415.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
           floridanus]
          Length = 358

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 148/359 (41%), Positives = 226/359 (62%), Gaps = 9/359 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA--YIKLTEEYAAISPIISKISIYDQKKQE 58
           M  +   ++  LK RF ++E  ++   +++   +  L++E+  +  II     +   ++ 
Sbjct: 1   MHTILINKLMSLKQRFYKLEKSLNNFNTINNKEFYSLSKEHTYLHEIIKYFEEWLNIQKN 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
                 ++    SD ++ D+ Q E+  +      LEN+I  LL     D   +C +E+RA
Sbjct: 61  IVHTKDML----SDIDMHDIVQDELKILNTSKHNLENKIKILLFSDPQDQY-NCFIELRA 115

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           GTGG EAA+F G+LFRMY RY  +++W +E++ ++  + GGYKEI+  +   G + ++KF
Sbjct: 116 GTGGKEAAIFAGELFRMYSRYIEMQRWNMEIIHATYGECGGYKEIIIKVPVHGSYGQLKF 175

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHV 237
           ESG HRVQR+P TE+ GR+HTS  T+AV+P        +I   D+RIDT R+SG+GGQHV
Sbjct: 176 ESGGHRVQRIPNTESQGRIHTSTCTIAVIPNIPNAILPEINSNDLRIDTFRSSGAGGQHV 235

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSA+RITHIP+G+ V    E+SQH+N+ +A+ VL++RLY +  K+   E S  R+  
Sbjct: 236 NTTDSAIRITHIPSGLSVECQDERSQHKNKSKALSVLKSRLYAINIKQKQQEESNVRRNL 295

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           IG+GDRS+RIRTYNF QGR+TDHRI  T YKL  ++ G +D +I P++  HQA ++   
Sbjct: 296 IGTGDRSDRIRTYNFQQGRVTDHRIAFTSYKLHDIMNGKLDILIQPIMCKHQATLLDQL 354


>gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix]
 gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix]
          Length = 364

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 180/341 (52%), Gaps = 15/341 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            + R  E++  +      +       L +E A +  I+  I     +  + +DL  +  +
Sbjct: 29  KEERLEEVQRELENPDIWNDPDRAQALGKERAQLENIVVNIREIGTQLDDSRDLLEMA-E 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D+E     + +V A+   +  LE    +  +     D+ +  L+I+AG+GG+EA  +
Sbjct: 88  ADDDAETASAVEADVEALTARVEALE----FRRMFSGDMDEANAYLDIQAGSGGTEAQDW 143

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    +K E++  S+ +  G K     I G   F  ++ E+GVHR+ R 
Sbjct: 144 ANILLRMYLRWAEAHGFKTEIIELSEGEVAGIKSATVRIEGEYAFGWLRTETGVHRLVRK 203

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++  R HTS A+V   PE     +++I   D+R+DT RASG+GGQHVN T+SA+RIT
Sbjct: 204 SPFDSGNRRHTSFASVFASPEVDDSFEIEINPADLRVDTYRASGAGGQHVNRTESAIRIT 263

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSE 304
           H P+GI+V   +++SQH+NR  AMK L+A+LY++E ++   E+  + + K  IG G    
Sbjct: 264 HEPSGIVVACQNDRSQHKNRDTAMKQLKAKLYEMEIQKRNAEKQAAEDAKSDIGWG---S 320

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +IR+Y   Q RI D R  + +   + VL G +D  I   L 
Sbjct: 321 QIRSYVLDQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361


>gi|322831509|ref|YP_004211536.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
 gi|321166710|gb|ADW72409.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
          Length = 365

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDELLQGAEDVTGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +  +    E+  +  ++ +LE    +  +     D  SC L+I+AG+GG+EA 
Sbjct: 88  VEA-DDEDTFNETVAELDVLTAKLEQLE----FRRMFSGEYDSASCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K EV+  SD +  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +I+++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIEIEINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+    +++SQH+N+ +AMK +RA+LY+ E ++   ++    + K  IG G  
Sbjct: 263 ITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNADKQQLEDTKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|84494539|ref|ZP_00993658.1| peptide chain release factor 1 [Janibacter sp. HTCC2649]
 gi|84384032|gb|EAP99912.1| peptide chain release factor 1 [Janibacter sp. HTCC2649]
          Length = 360

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 143/359 (39%), Positives = 207/359 (57%), Gaps = 18/359 (5%)

Query: 10  CDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L    A +E  M +       D   ++ + YAA+ P ++  + +     + +    + 
Sbjct: 6   EVLAQEHATLEREMGDPAIASDPDKLREINKRYAALGPTVAAYAAWQLATDDLEAARELA 65

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D+           +       L      LL+P+D DDD+  I+E++AG GG E+A
Sbjct: 66  TE---DAGFAAEVPALETSANDAADRL----RRLLIPRDPDDDRDVIVEVKAGEGGEESA 118

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV-------FSRMKFE 179
           LF GDL RMY RYA  R W+ EVL S++ D GG+K++  ++  +         ++R+K+E
Sbjct: 119 LFAGDLLRMYLRYAERRGWRTEVLGSTETDLGGFKDVQVSVKSKKAPLPGEGPWARLKYE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
            GVHRVQRVP TE  GR+HTSAA V V+PEA E++V+I   D+RID  R+SG GGQ VNT
Sbjct: 179 GGVHRVQRVPITETQGRIHTSAAGVWVMPEAEEVEVEIHANDLRIDVFRSSGPGGQSVNT 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH+PTG +V   +EKSQ QNR  AM+VLRARL+ +         +  R  Q+ 
Sbjct: 239 TDSAVRLTHLPTGTVVICQNEKSQLQNREAAMRVLRARLHQMAMDEANAASADIRASQVR 298

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           + DRSERIRTYNF++ RI+DHR     Y L+ VL G +D ++   +TA +   + +  E
Sbjct: 299 TVDRSERIRTYNFAENRISDHRTGFKAYNLDTVLGGELDAVVESAMTADEQARLAALGE 357


>gi|239917332|ref|YP_002956890.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
 gi|281414188|ref|ZP_06245930.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
 gi|239838539|gb|ACS30336.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
          Length = 369

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 147/369 (39%), Positives = 209/369 (56%), Gaps = 16/369 (4%)

Query: 1   MVFLSHKQ--ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQK 55
           M     ++  +  L     E+  R+S+           +L   +A +  +++    +   
Sbjct: 1   MFDSEQRREAVDRLLAEHRELTARLSDPAVHQDPALARRLNRRFAELGAVVTAHRAWSAA 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
            +E  D   +    + D+         + A E E       +  LL+P+D DD +  ILE
Sbjct: 61  AEELADARELAAAGDDDAAAFAAEVPGLEAAEAEAA---ERLRRLLIPRDPDDARDVILE 117

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SG 169
           I+ G GG EAALF GDL RMY RYA  R WK EVLS++ +D GGYK++   +        
Sbjct: 118 IKGGEGGEEAALFAGDLLRMYLRYADSRGWKTEVLSATHSDLGGYKDVHVAVRGSAADPA 177

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMR 228
            GV++R+KFE GVHRVQRVP TE+ GR+HTSAA V VLPE     +V +   D+++D  R
Sbjct: 178 DGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPNDLKVDVFR 237

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           +SG GGQ VNTTDSAVR+TH+PTGI+V+  +EKSQ QNR  A++VLR+RL + +R     
Sbjct: 238 SSGPGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRLLERQRAEQDA 297

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           E SA R  Q+ + DRSERIRTYNF + RI DHR     + L+ VL G ++ +I   L   
Sbjct: 298 EDSAARAAQVRTMDRSERIRTYNFPENRIADHRTGYKAHNLDAVLDGDLEAVIASCLALD 357

Query: 348 QAKMIGSAS 356
           + + + +  
Sbjct: 358 EERRLAALG 366


>gi|120405293|ref|YP_955122.1| peptide chain release factor 1 [Mycobacterium vanbaalenii PYR-1]
 gi|166223576|sp|A1TD66|RF1_MYCVP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119958111|gb|ABM15116.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
           vanbaalenii PYR-1]
          Length = 357

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 150/356 (42%), Positives = 208/356 (58%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I  +   + E+E R+++        A  K+   +A ISPI+S     +  + + +    +
Sbjct: 8   IEAILAEYGELEQRLADPELHADPAAAKKVGRRFAQISPIVSTYHKLEAARGDLEAAREL 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D  S +   D    +V  ++  +         LL P+D  D    +LE+++G GG E+
Sbjct: 68  AADDASFAAEVDELTTKVADLDDRLT-------DLLAPRDPHDADDIVLEVKSGEGGEES 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-----SGRGVFSRMKFES 180
           ALF  DL RMY RYA    W V +L  + +D GGYK+   +I     S  GV+SR+KFE 
Sbjct: 121 ALFAADLARMYIRYAERHGWTVTMLGETTSDLGGYKDATLSIAGKGDSADGVWSRLKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V V PE  E   V I   D+RID  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRIDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL  +  ++ + + SA+R  QI 
Sbjct: 241 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYN+ + RI DHRIN   + L+ VL G +D + + L  A +   + +
Sbjct: 301 TVDRSERIRTYNYPENRIADHRINYKSHNLDQVLDGDLDPLFDALAAADKQARLQN 356


>gi|85057288|ref|YP_456204.1| peptide chain release factor 1 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789393|gb|ABC65125.1| bacterial peptide chain release factor 1 [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 351

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 138/351 (39%), Positives = 214/351 (60%), Gaps = 2/351 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
              ++  +K ++ +++  +    ++   I + +  + + P +   + Y   + E   + T
Sbjct: 1   MLDRLKKIKQKYQDLQKLLLNEQNITQKIDIFKNLSKLEPTVELFNRYLNLETEFIQVQT 60

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E+  LA+ E   I  + +    ++  LLLP+D  D K+ +LEI+   GG+E
Sbjct: 61  IL-ETEQDQELLLLARQEKDTILSKKKITLEKLKILLLPQDPFDKKNVVLEIKGAAGGNE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF  DL R Y +YA  +KWKVE+L+ + +  GG   +   ISG+ ++S +K+ESGVHR
Sbjct: 120 ANLFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGVHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA GR+HTS A V V PEA E+++ I   DIR DT  +SG GGQ VNTT SAV
Sbjct: 180 VQRVPTTEAQGRIHTSTAVVLVFPEAEELELKIDWHDIRTDTFNSSGPGGQSVNTTKSAV 239

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+P+GI +     KSQH+N+ +A  +L+ R+Y+        E   +RK  +G+G+RS
Sbjct: 240 RLTHVPSGISVACQEGKSQHENKDKAFTLLKTRIYNQMLNIKQEEEKTHRKKLVGTGERS 299

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           E+IRTYN+ Q RITDHRI LTL KL+ +++G +D +I PL+   Q + +  
Sbjct: 300 EKIRTYNYPQNRITDHRIGLTLQKLDIIMEGKLDLVIEPLIHEAQKEQLAQ 350


>gi|226328243|ref|ZP_03803761.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
 gi|225202976|gb|EEG85330.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
          Length = 347

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 182/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I   DQ  ++   L  + 
Sbjct: 10  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLDQGLEDVSGLLELA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D E  + A  E+  + K++ +LE    +  +     D   C L+++AG+GG+EA 
Sbjct: 70  VEA-DDEETFNEAIAELDVLNKKLEQLE----FRRMFSGEYDSADCYLDLQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  SD D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 125 DWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  + PE    ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 185 RKSPFDSGGRRHTSFSSAFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTG++    +++SQH+N+ +AMK ++A+LY++E ++   ++    + K  IG G  
Sbjct: 245 ITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 303 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345


>gi|297580789|ref|ZP_06942715.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae RC385]
 gi|297535205|gb|EFH74040.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae RC385]
          Length = 344

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 181/343 (52%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +       +    L +E +A+  ++  I   D+   + + L  + 
Sbjct: 7   DAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVEGLLELA 66

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D E  D    E+  +E ++ +LE    +  +     D   C L+++AG+GG+EA 
Sbjct: 67  IEAE-DQETFDEIGPELDELEVKLEQLE----FRRMFSGDHDSSDCYLDLQAGSGGTEAQ 121

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K EV+  S+ D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 122 DWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLV 181

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  + PE  E  D++I   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 182 RKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVR 241

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E ++   E+ AN   K  IG G  
Sbjct: 242 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG-- 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 300 -SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341


>gi|160876721|ref|YP_001556037.1| peptide chain release factor 2 [Shewanella baltica OS195]
 gi|160862243|gb|ABX50777.1| peptide chain release factor 2 [Shewanella baltica OS195]
          Length = 352

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 166/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 15  DAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    + ++       +        + +  +     D  +C L+I++G+GG+EA 
Sbjct: 75  IEEEDEDTFNETSKELDYLESRLAD-----LEFRRMFSGPQDASNCYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RIDT RASG+GGQHVN T+SA+R
Sbjct: 190 RKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESAIR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+L+++E   +    + + + K  IG G  
Sbjct: 250 ITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 349


>gi|117617639|ref|YP_857857.1| peptide chain release factor 2 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223621|sp|A0KNK6|RF2_AERHH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|117559046|gb|ABK35994.1| peptide chain release factor 2 (programmed frameshift) [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 365

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 165/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E  A+  ++  I    Q   +   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERVALENVVGTIDTLTQGADDVAMLVELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A    +     ++ +  +     D   C ++I++G+GG+EA 
Sbjct: 88  VEGEDEDTFNEAV-----AEADVLETKLVDLEFRRMFSGQHDPSDCYIDIQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +K E++  S+ D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 143 DWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS  +V V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPTG++V   +++SQH+N+ + MK L+A+LY++E ++   E+ A    K  IG G  
Sbjct: 263 ITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEETKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|330723258|gb|AEC45628.1| peptide chain release factor 1 [Mycoplasma hyorhinis MCLD]
          Length = 383

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 156/362 (43%), Positives = 235/362 (64%), Gaps = 9/362 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M       +  +K ++  +  ++ +     ++  Y K+ +E A+I  I+     Y ++  
Sbjct: 23  MEKSMLNSLNSIKEKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNYLKQVS 82

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +D   ++ +   D EI +LA+ E+    K+I E+E E+  LLLPKD +DDK+ I+EIR
Sbjct: 83  IIEDSKKLLQEK--DVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIR 140

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +FVGDL++MY ++A  +KW V+VL+SS    GG+ +IV  +SG  V+S++K
Sbjct: 141 GAAGGDEANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLK 200

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQR+P TE  GRVHTS  TV ++PE   +I VDI  +D+RIDT R+SG+GGQ 
Sbjct: 201 FESGVHRVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQS 260

Query: 237 VNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTG++  +   +SQ  N+  A+K+L++++Y++E ++        RKL
Sbjct: 261 VNTTDSAVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIEGQFRKL 320

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             GSG RSE+IRTYN+ Q R+TDHRI+ +   L+ V+ G +D II+ LL   +A+ I ++
Sbjct: 321 A-GSGARSEKIRTYNYPQDRVTDHRISFSTS-LKNVIVGNLDPIIDALLAEDKAERIATS 378

Query: 356 SE 357
            E
Sbjct: 379 YE 380


>gi|213859593|ref|ZP_03385297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 317

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 165/319 (51%), Positives = 232/319 (72%), Gaps = 6/319 (1%)

Query: 41  AISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYL 100
            +S +    + + Q + + +    ++     D E+R++AQ E+   +++  +LE ++  L
Sbjct: 1   QLSDVSRCFTDWQQVQDDIETAQMML----DDPEMREMAQEELREAKEKSEQLEQQLQVL 56

Query: 101 LLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY 160
           LLPKD DD+++  LE+RAGTGG EAALF GDLFRMY RYA  R+W+VE++S S+ + GGY
Sbjct: 57  LLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGY 116

Query: 161 KEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPL 219
           KEI+A ISG GV+ R+KFESG HRVQRVPATE+ GR+HTSA TVAV+PE  E +  DI  
Sbjct: 117 KEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINP 176

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY 278
            D+RIDT R+SG+GGQHVNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR++
Sbjct: 177 ADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIH 236

Query: 279 DVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDD 338
             E  +     ++ R+  +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+  ++G +D 
Sbjct: 237 AAETAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDM 296

Query: 339 IINPLLTAHQAKMIGSASE 357
           +I P++  HQA ++ + SE
Sbjct: 297 LIEPIVQEHQADLLAALSE 315


>gi|298500779|ref|ZP_07010582.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae MAK 757]
 gi|297540560|gb|EFH76618.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae MAK 757]
          Length = 344

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 181/343 (52%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +       +    L +E +A+  ++  I   D+   + + L  + 
Sbjct: 7   DAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVEGLLELA 66

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D E  D    E+  +E ++ +LE    +  +     D   C L+++AG+GG+EA 
Sbjct: 67  IEAE-DQETFDEIGPELDELEAKLEQLE----FRRMFSGDHDSSDCYLDLQAGSGGTEAQ 121

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K EV+  S+ D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 122 DWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLV 181

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  + PE  E  D++I   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 182 RKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVR 241

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E ++   E+ AN   K  IG G  
Sbjct: 242 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG-- 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 300 -SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341


>gi|168705097|ref|ZP_02737374.1| peptide chain release factor 1 [Gemmata obscuriglobus UQM 2246]
          Length = 358

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 215/354 (60%), Gaps = 12/354 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +     R+AE+E ++ +       +K   + +E  A++ I+     Y +  +   D   +
Sbjct: 5   LEPQLARYAELEQQLYDPAIAGDPVKAGAIGKERGALAKIVEPYIEYKRLCRAIADAEVM 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D +++D+A  E+  +  +   L   I   LL   ++D    I+EIRAGTGG EA
Sbjct: 65  AA----DPDLKDMADEELADLRPKRDALHARIEEKLLLDPSEDFSKLIIEIRAGTGGDEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ALF G+L+ MY RYA  + WK+E ++SS  + GG+KE+   ++G  V+  +++ESG HRV
Sbjct: 121 ALFAGNLYEMYTRYAREKGWKIEEIASSPGEAGGFKEVAFGVTGDDVYQLLRYESGGHRV 180

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL-EDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVPATE  GR+HTSAATVAVLPE  E  V+I    DI  + MRA G+GGQHVN T+SAV
Sbjct: 181 QRVPATETQGRIHTSAATVAVLPEPEEAQVEINEANDIEWERMRAGGAGGQHVNKTESAV 240

Query: 245 RITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           RI +         +     +SQ +N  +AM++LR+RL++ +++R+  ER++ RK QIGSG
Sbjct: 241 RIWYKKGTPDEMEVKCQDGRSQGKNYEQAMRILRSRLFERQQERIHRERASMRKEQIGSG 300

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DR+ RIRTYNF Q R TDHRI  T+YKL+ ++ G +D +I P+    + + + +
Sbjct: 301 DRNARIRTYNFPQNRCTDHRIEFTVYKLDAIMAGALDQMIQPMRDHVKKEKLAA 354


>gi|325578209|ref|ZP_08148344.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159945|gb|EGC72074.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 364

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +   K   L +E  ++  ++  I   +Q  ++ + L  + 
Sbjct: 27  DAKVERLEEVNAELEQPDVWNDPEKAQALGKERVSLEQVVDTIKNLEQGLEDVEGLLELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ +   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 87  VEAEDEETFNEAV-----AELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ 
Sbjct: 142 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS A V V PE  +  D++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 202 RKSPFDSNNRRHTSFAAVFVYPEIDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G  
Sbjct: 262 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 320 -SQIRSYVLDDARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 362


>gi|220913097|ref|YP_002488406.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6]
 gi|254790860|sp|B8HB03|RF1_ARTCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219859975|gb|ACL40317.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6]
          Length = 357

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 141/362 (38%), Positives = 208/362 (57%), Gaps = 18/362 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  L +    I+ ++ +           KL    A ++ I+     ++  + +     
Sbjct: 3   ESVQGLLDEHDSIQAQLGDPAVYADQRLARKLGRRSAQLNGIVEAYHRWEGLRDDLSAAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D E          ++E    +L      LL+P+D DD ++ ILE++ G GG 
Sbjct: 63  EMAAE---DPEFAAEVPELEASLETAAAKL----RRLLIPRDPDDARNVILEVKGGEGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           EAALF GDL RMY RYA  R WK E++S++++D GGYK++   +         GV++R+K
Sbjct: 116 EAALFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAVKGSSNDPAEGVYARLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FE GVHRVQRVP TE+ GR+HTSAA V VLPE  E +  +I   D++ID  R+SG GGQ 
Sbjct: 176 FEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR   M+VLRAR+   +++++    S  RK 
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAANSEQRKS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + DRSERIRTYN+ + RI DHR     Y L+ V+ G ++ +I   +   +   + + 
Sbjct: 296 QIRTMDRSERIRTYNYPENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMDEQARLDAI 355

Query: 356 SE 357
            +
Sbjct: 356 GD 357


>gi|111115018|ref|YP_709636.1| peptide chain release factor 1 [Borrelia afzelii PKo]
 gi|119361512|sp|Q0SNW8|RF1_BORAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110890292|gb|ABH01460.1| peptide chain release factor 1 [Borrelia afzelii PKo]
          Length = 357

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 169/355 (47%), Positives = 247/355 (69%), Gaps = 5/355 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           +  +++    +R   IE ++ +   +    K ++   EY  +  I +K   Y+    +  
Sbjct: 1   MFLEKLNSATSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYENILNQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D  T++       E+++L + E++ ++K+   LE+EI  LLLP+D +D K+ I+EIRAGT
Sbjct: 61  DNKTILEKEEQ-QEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KEI+  I G+ VF ++K+ES
Sbjct: 120 GGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+P TE++GR+ TSAATVAVLP   E ++DI  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS NRK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSNNRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           GDRSERIRTYNF Q RITDHR N+TLYKLE  +QG +D +++PL    Q + + S
Sbjct: 300 GDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGELDQLLDPLTIELQEQTLKS 354


>gi|283783535|ref|YP_003374289.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05]
 gi|283441331|gb|ADB13797.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05]
          Length = 365

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 144/355 (40%), Positives = 203/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             + +IE RM         DA  KL   +A +  I++    Y Q   + +  + +  D  
Sbjct: 17  EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASD-- 74

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D +  + A+     I     +L       L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 75  -DPDFAEEAKRLEEQIPAAKEKL----RTALIPRDPDDARDMIMEIKAGTGGEEAALFAG 129

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W   + S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 130 DLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVH 189

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 190 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 249

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 250 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 309

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  +  A
Sbjct: 310 DRSERIRTYNFPENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQADEADRLAQA 364


>gi|227503858|ref|ZP_03933907.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
 gi|227199481|gb|EEI79529.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
          Length = 358

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 145/358 (40%), Positives = 215/358 (60%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  IE++M +         + KL++ YA + PI++  +   Q +Q+ +D   +
Sbjct: 8   VDDIVSEYQGIEMQMGDPEVAGDQKLFRKLSKRYAELRPIVAVNNDLVQARQDLEDAKEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +   +  D        +E  + ELE ++  LL P+D  D +  I+EI+AG GG EA
Sbjct: 68  AYEDHDFQDEVD-------RLEPLVVELEEKLADLLAPRDEHDSEDIIMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMYER+A    ++ EVL  +++D GG K++  +   +       +S  KFE 
Sbjct: 121 ALFAGDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E++  +I  +D+R+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVESVNIDEKDLRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QN+ RA++VL+ARL  +ER+    E    R  Q+ 
Sbjct: 241 TDSAVRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQIEREAREAEAGEQRASQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSERIRTYN+ + RITDHRI      L+ VL G + D+I  L    +A+ + +  
Sbjct: 301 TLDRSERIRTYNWPENRITDHRIGYKANNLDAVLNGDMQDLITALQAQERAERLEAEG 358


>gi|325963840|ref|YP_004241746.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469927|gb|ADX73612.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 357

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 143/362 (39%), Positives = 211/362 (58%), Gaps = 18/362 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  L +    I+ ++ +           KL    A ++ I+     ++  + +     
Sbjct: 3   ESVQGLLDEHDAIQAQLGDPAVYADQRLARKLGRRSAQLNGIVEAYHKWEGIRDDLAAAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D E          ++E+   +L      LL+P+D DD ++ ILE++ G GG 
Sbjct: 63  EMASE---DPEFAAEVPELEASLEEAAAKL----RRLLIPRDPDDARNVILEVKGGEGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           EAALF GDL RMY RYA  R WK E++S++++D GGYK++   +         GV++R+K
Sbjct: 116 EAALFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAVKGNSNDPAEGVYARLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FE GVHRVQRVP TE+ GR+HTSAA V VLPE  E +  +I   D++ID  R+SG GGQ 
Sbjct: 176 FEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR   M+VLRAR+   +++++  E SA RK 
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAENSAQRKS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + DRSERIRTYN+ + RI DHR     Y L+ V+ G ++ +I   +   +   + + 
Sbjct: 296 QIRTMDRSERIRTYNYPENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMDEQARLDAI 355

Query: 356 SE 357
            +
Sbjct: 356 GD 357


>gi|87309295|ref|ZP_01091431.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645]
 gi|87287934|gb|EAQ79832.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645]
          Length = 358

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 136/357 (38%), Positives = 223/357 (62%), Gaps = 6/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + + +  +RF  +E +MS+   +        +  E+ +++ + +K   +     E  +
Sbjct: 1   MREMLEEKLSRFEFLEKQMSDPDVMGNSHQMATIAREHGSLAKLATKYRTFKNTIDEMGE 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              ++   + D E+ +LA  +++ ++ +  +L  E+  + +  D  +    +LEIR G G
Sbjct: 61  AKELL--ESDDEEMCELAAADIVTLKAKREKLWQELLDMTIGGDDANRTRIVLEIRGGAG 118

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL+ MY+RYA  +KWK EV+ ++  + GG+KE++ ++ G GV+  +++ESG
Sbjct: 119 GDEAALFARDLYEMYKRYAETKKWKYEVMEANPTELGGFKEVIISVEGEGVYRELQYESG 178

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMR-ASGSGGQHVNTT 240
            HRVQRVP TEA GRVHTSAATVAV+PE  +++ ++  ED  ++    +SG GGQHVN T
Sbjct: 179 GHRVQRVPETEAKGRVHTSAATVAVMPEPEDVEFELNPEDYEVERYAASSGPGGQHVNKT 238

Query: 241 DSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
            SAVR+ H    I+    E+SQH+N  +A+++L+ +LY+V+R     +RS +RK  +GSG
Sbjct: 239 ASAVRLIHKDGVIVQCCEERSQHKNLAKALRLLKTKLYEVKRAEEEKQRSDHRKSLVGSG 298

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           DRS+RIRTYNF + R+TDHRINLTLYKL+ ++ G I  +I+ L+   + ++ G   +
Sbjct: 299 DRSQRIRTYNFPENRVTDHRINLTLYKLDQIIAGAIQPVIDGLVDYDRQQLRGDMGD 355


>gi|56478734|ref|YP_160323.1| peptide chain release factor 2 [Aromatoleum aromaticum EbN1]
 gi|81598559|sp|Q5NZU2|RF2_AZOSE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56314777|emb|CAI09422.1| peptide chain release factor 2 (RF-2),gene containing programmed
           frameshift site [Aromatoleum aromaticum EbN1]
          Length = 367

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 184/344 (53%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +  ++  E+   + +    +   K   L +E   +  ++  +   +    + +DL  + 
Sbjct: 30  DEKSSKLEEVTRALEDPAVWNNAEKAQELGKEKRQLEDVVHNLRDIESLSSDLKDLFDLA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +     + ++  ++ ++  LE    +  +  +  D   C +EI+AG GG+EA 
Sbjct: 90  -EAEDDEDTLAAVEADIGELQAKVHALE----FRRMFSNPMDPNPCFIEIQAGAGGTEAQ 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L RMY RY   + + VE++  S+ +  G K     +SG   +  ++ E+G+HR+ 
Sbjct: 145 DWAGMLERMYLRYCERKGFNVELMEESEGEVAGIKGATIKVSGDYAYGFLRTETGIHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS ++V V PE  +   +DI   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSNARRHTSFSSVFVYPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH PTG++V   +++SQH+N+  AM +L+ARLY++E ++  +E+    + K  IG G  
Sbjct: 265 ITHEPTGVVVQCQNDRSQHKNKAEAMSMLKARLYELELRKRQSEQQKLEDSKSDIGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N  +   + VL G +DD I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNFEVGNTQAVLDGDLDDFIAASLKQ 365


>gi|33862085|ref|NP_893646.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|81575585|sp|Q7UZX1|RF1_PROMP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33634303|emb|CAE19988.1| peptide chain release factor RF-1 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 364

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 228/354 (64%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +    F  +E+++++    +   KL     E A + P++   +      +E  D   
Sbjct: 9   RLKNASESFVNLEMQLADPDIANNPKKLESIARERAKLEPLVLDFNQLLDTDKEIGDSKQ 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ ++ +D ++  L   E+ ++E    +L  ++   LLPKD  D++S +LEIRAG GG+E
Sbjct: 69  LLKENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAGGNE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V+ +S+S++D GG+KE+V ++ G  V+S++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKIGWTVKPISASESDMGGFKELVISVKGDSVYSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   +I I T R+ G+GGQ+VN  ++A+
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTEIEIGTARSGGAGGQNVNKVETAI 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RAM++LRA+LY+++ K    +  + R +Q+GSGDRS
Sbjct: 249 DLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLMQVGSGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYNF   R TDHR+  + + LE +L G +DD+I   L   Q +M+   +E
Sbjct: 309 EKIRTYNFKDNRTTDHRLG-SNFALEPILAGQLDDVIYACLAQEQKRMLEDFNE 361


>gi|302542528|ref|ZP_07294870.1| peptide chain release factor 1 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460146|gb|EFL23239.1| peptide chain release factor 1 [Streptomyces himastatinicus ATCC
           53653]
          Length = 356

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 148/349 (42%), Positives = 213/349 (61%), Gaps = 18/349 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + DL    A +E R+++        +   L + YA ++PII     + Q   + +   
Sbjct: 3   EAVEDLIGEHAALEKRLADPAVHADQREAKRLNKRYAELTPIIDTYRDWKQTGDDIETAQ 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D    ++            E    EL + +  LL+P+D  DDK  ILE++AG GG 
Sbjct: 63  ELAQDDPDFADEVKEL-------ELRRAELTDRLRLLLVPRDPSDDKDVILEVKAGEGGE 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRM 176
           E+ALF GDL RMY RYA    WK E++ ++++D GGYK++   +        G+GV++R+
Sbjct: 116 ESALFAGDLLRMYLRYAERIGWKTEIIDANESDLGGYKDVQVAVKAKGTIEPGQGVWARL 175

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E++V+I   D+RID  R+SG GGQ 
Sbjct: 176 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVEVEIGPNDLRIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QN+ +A+++LR+RL    ++    E S  R+ 
Sbjct: 236 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           Q+ + DRSERIRTYNF + RI+DHR+    Y L+ VL G +  +I   +
Sbjct: 296 QVRTVDRSERIRTYNFPENRISDHRVGFKAYNLDQVLDGELAPVIQACV 344


>gi|145297980|ref|YP_001140821.1| peptide chain release factor 2 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166223622|sp|A4SJK1|RF2_AERS4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|142850752|gb|ABO89073.1| peptide chain release factor 2 [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 365

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 169/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E  ++  ++  I +  Q  ++ + L ++ 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERVSLENVVGTIDVLTQGAEDVEMLVSLA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A    +     ++ +  +     D   C ++I++G+GG+EA 
Sbjct: 88  VEGEDEDTFNEAV-----AEADVLETKLVDLEFRRMFSGQHDGSDCYIDIQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +K E++  SD D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 143 DWANMVLRMYLRWGDAHGYKPELIELSDGDVAGIKSATVKFTGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS  +V V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPTG++V   +++SQH+N+ + MK L+A+LY++E ++   E+ A    K  IG G  
Sbjct: 263 ITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEETKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
           20162]
 gi|296027097|gb|ADG77867.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
           20162]
          Length = 362

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 150/360 (41%), Positives = 214/360 (59%), Gaps = 21/360 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+   ++ +E +MS+    +      K+ + +A ++PI++     +  +++      +
Sbjct: 9   IDDILAEYSGLEQQMSDPALHNDASAARKVGKRFAELAPIMATHRKLEAAREDRAAAQEL 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D +S ++   +         ++I  LE ++  LL P+D  D    +LE+++G GG E+
Sbjct: 69  AADDSSFADEVTVL-------TEQIDALEQQLTDLLAPRDPHDSDDVVLEVKSGEGGEES 121

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG---------VFSRM 176
           ALF GDL RMY RYA  R WKVE L ++ +D GGYK+    I  RG         V++RM
Sbjct: 122 ALFAGDLARMYLRYAEQRGWKVETLGATYSDLGGYKDATFAIKSRGPGADGAIDGVWARM 181

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVPATE+ GR+HTSAA V V PE  E  +V I   D+RID  R+SG GGQ
Sbjct: 182 KFEGGVHRVQRVPATESQGRIHTSAAGVLVYPEPDEVEEVQIDESDLRIDVYRSSGKGGQ 241

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PT I+V   +E+SQ QN+ RAM+VL ARL  +  +      S +R 
Sbjct: 242 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLQALREEEAEAAASDSRA 301

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            QI + DRSERIRTYNF + RI DHRI    + L+ VL G +D +++ L  A +   + +
Sbjct: 302 AQIRTVDRSERIRTYNFPENRIADHRIGFKAHNLDQVLDGELDPLLDALQAADRQARLEA 361


>gi|262274920|ref|ZP_06052731.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
 gi|262221483|gb|EEY72797.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
          Length = 347

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 176/343 (51%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L  E A++  ++  I    Q  +   +L  + 
Sbjct: 10  DAKKERLEEVNAELEQPDVWNDPERAQALGRERASLEAVVETIDQLAQGGEYITELLELA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++          ++ +   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 70  VEENDQETFDEIEPE-----LNDLEDKLAKLEFRRMFSGDHDASDCYIDLQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+A  + +K EV+  S+ D  G K     ISG   +  ++ E+GVHR+ 
Sbjct: 125 DWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  + PE  E  D+DI   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 185 RKSPFDSGGRRHTSFASAFIYPEVDENIDIDINPADLRIDVYRASGAGGQHVNTTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPT  +V   +++SQH+N+ +AMK LRA+L+++E ++   E+ AN   K  IG G  
Sbjct: 245 ITHIPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 303 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 344


>gi|307265645|ref|ZP_07547198.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919289|gb|EFN49510.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 246

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 147/244 (60%), Positives = 189/244 (77%), Gaps = 1/244 (0%)

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           +EIRAG GG EAALF  DLFRMY  YA  + WKVE++SS++ D GG+KE++  ISG+G +
Sbjct: 1   MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAY 60

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           SR+K+ESGVHRVQRVP TEA GR+HTS ATVAVLPE  E+DV+I   DI+ID  R+ G G
Sbjct: 61  SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPSDIKIDVFRSGGHG 120

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVR+THIPTGI+V    E+SQ QNR RA+K+LRA+LY++  +    E +  
Sbjct: 121 GQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAET 180

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           RK Q+G+G+RSERIRTYNF QGR+TDHRI LTLY+L+ VL G +D+II+ L+   QA+ +
Sbjct: 181 RKSQVGTGERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKL 240

Query: 353 GSAS 356
            + +
Sbjct: 241 KNMN 244


>gi|298252617|ref|ZP_06976411.1| protein chain release factor A [Gardnerella vaginalis 5-1]
 gi|297532981|gb|EFH71865.1| protein chain release factor A [Gardnerella vaginalis 5-1]
          Length = 366

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 144/355 (40%), Positives = 203/355 (57%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             + +IE RM         DA  KL   +A +  I++    Y Q   + +  + +  D  
Sbjct: 18  EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASD-- 75

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D +  + A+     I     +L       L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 76  -DPDFAEEAKRLEEQIPAAKEKL----RTALIPRDPDDARDMIMEIKAGTGGEEAALFAG 130

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W   + S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 131 DLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVH 190

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 191 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 250

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 251 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 310

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  +  A
Sbjct: 311 DRSERIRTYNFPENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQADEADRLAQA 365


>gi|168830308|gb|ACA34405.1| PrfA [uncultured bacterium pTW2]
          Length = 360

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 161/338 (47%), Positives = 231/338 (68%), Gaps = 10/338 (2%)

Query: 25  ESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           +  ++     +  L+ E+A + P+   ++  ++ +++      +     SD E+  LA+ 
Sbjct: 25  DPGTIADAERFRALSREFAQLEPVAVALAAENRAQRDLAAAQAM----RSDPELGGLAEE 80

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           E+ A    ++ELE+E+   L+ +D  DD +  LE+RAGTGG EAA+F GDLFRMY RYA 
Sbjct: 81  EIAAANARLQELESELMAQLVRRDPRDDGNLYLEVRAGTGGDEAAIFAGDLFRMYARYAE 140

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            + WK+EV S+S  + GGYKEIVA + GRG +S++KFESG HRVQRVP TE+ GR+HTSA
Sbjct: 141 RQGWKLEVESASVGEHGGYKEIVARVEGRGAYSKLKFESGTHRVQRVPDTESQGRIHTSA 200

Query: 202 ATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSE 259
           ATVA++  +++++ ++I   D+RIDT R+SG+GGQHVN TDSA+RITH+P+G++V   +E
Sbjct: 201 ATVAIIAEDSSDVAIEINPADLRIDTFRSSGAGGQHVNKTDSAIRITHLPSGVVVENQTE 260

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQH NR +AMK LRA L + E  R    ++ +RKLQ+GSGDRS+RIRTYN+ QGRITDH
Sbjct: 261 RSQHANRDKAMKRLRAMLVEAETSRREAAQAQDRKLQVGSGDRSQRIRTYNYPQGRITDH 320

Query: 320 RI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           R+  LTLY L  VL+G +D +I  L    QA  +    
Sbjct: 321 RVEGLTLYDLPNVLEGNLDALIERLAREQQADELARLG 358


>gi|197294284|ref|YP_001798825.1| Protein chain release factor A [Candidatus Phytoplasma
           australiense]
 gi|226739118|sp|B1V950|RF1_PHYAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171853611|emb|CAM11482.1| Protein chain release factor A [Candidatus Phytoplasma
           australiense]
          Length = 354

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 145/351 (41%), Positives = 223/351 (63%), Gaps = 2/351 (0%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL-HTVI 66
           ++  ++ ++  ++  + ++ S+   I + +  + + PI+     Y   +++  ++   + 
Sbjct: 4   RLKKIQQKYQNLQQDLLQNQSISNKINIFKNLSKLEPIVELFQQYLTLEEQLTNITKALN 63

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D   D EI +LAQ E   + ++ + L N++  LLLP+D +D K+ ILEI+   GG+EA 
Sbjct: 64  QDQIEDKEILELAQKEKETLSQQKKVLWNQLRILLLPQDPEDQKNVILEIKGAVGGNEAN 123

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF  DL R Y +YA  +KWKVE+L+   +  GG   +   ISG+ ++S +K+ESGVHRVQ
Sbjct: 124 LFAADLLRTYMKYAESKKWKVEILNLHPSIKGGLSSVELLISGQNIYSFLKYESGVHRVQ 183

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVPATE  GR+HTS A V VLPEA E+++ I   DIR DT  +SG GGQ VNTT SAVR+
Sbjct: 184 RVPATEVQGRIHTSTAIVLVLPEAKEVEIKIDWNDIRTDTFNSSGPGGQSVNTTKSAVRL 243

Query: 247 THIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           +H+P+GI +     KSQH+N+ +A  +L+AR+Y+          + +RK  +G+GDRSE+
Sbjct: 244 SHLPSGISVACQEGKSQHENKEKAFTLLKARIYNQILNAKQEAENKHRKSLVGTGDRSEK 303

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           IRTYN+ Q RITDHRI LTL KL+ +++G +D II PL+ A Q + +  + 
Sbjct: 304 IRTYNYPQNRITDHRIGLTLQKLDIIMEGKLDFIIEPLIDATQKEKLVQSE 354


>gi|284032945|ref|YP_003382876.1| peptide chain release factor 1 [Kribbella flavida DSM 17836]
 gi|283812238|gb|ADB34077.1| peptide chain release factor 1 [Kribbella flavida DSM 17836]
          Length = 359

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 151/359 (42%), Positives = 220/359 (61%), Gaps = 18/359 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  LK  +A++E +MS+           ++ + YAA++P++     + Q   + +   
Sbjct: 3   EAVQTLKAEYADLERQMSDPELHSDQANARRVGKRYAALAPVVRTYDEWLQTADDIEAAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +  + ++         + +E    EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAAEDPAFADEA-------VKLEARREELTEKLRLLLVPRDAGDDKDAILEIKAGEGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRM 176
           E+ALF GDL +MY ++A  + WK EVL S+++D GGYK I   +        G   ++++
Sbjct: 116 ESALFAGDLLKMYLKFAETQNWKTEVLDSAESDLGGYKSITVAVKAKGTPEPGEAPYAKL 175

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           KFE GVHRVQRVP TE+ GR+HTSAA V VLPEA ++DV+I   D+RID  R+SG GGQ 
Sbjct: 176 KFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEDVDVEIDPNDLRIDVFRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V+  +EKSQ QNR +AM+VLR+RL    ++    E S  R+ 
Sbjct: 236 VNTTDSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRSRLLAAAQEAADQEASDARRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           QI + DRSERIRTYNF + R +DHR+    + L+ VL G +  +I  L  A  A  + +
Sbjct: 296 QIRTVDRSERIRTYNFPENRFSDHRVGYKAHNLDQVLGGDLAPVIQALTDADMAARLAA 354


>gi|218196470|gb|EEC78897.1| hypothetical protein OsI_19275 [Oryza sativa Indica Group]
 gi|222630945|gb|EEE63077.1| hypothetical protein OsJ_17885 [Oryza sativa Japonica Group]
          Length = 368

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 164/356 (46%), Positives = 245/356 (68%), Gaps = 3/356 (0%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +  +++  ++ R A ++ ++++   S + Y +  +E   +   +  I     K++E + L
Sbjct: 12  VMEQRMKLIEQRSAYLQEQINQPDASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGL 71

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            +++ +   + + R++A  E+L   +E ++L++++   LLPKD  D++ CILE+RAGTGG
Sbjct: 72  KSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGG 131

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA+LF  D+F+MYE+Y+    WK + +   ++   GYKE   TISG G + ++KFESG+
Sbjct: 132 EEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGI 191

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE SGRVHTSA +VA+LP+A E+DV +  ED+RIDT R+ GSGGQ VNTTDS
Sbjct: 192 HRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDS 251

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG +V    E+SQHQN+ +A+KVLRARLY++ER R+  +RS  R  QIGSGD
Sbjct: 252 AVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSEQIGSGD 311

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           RSERIRTYNF QGR+TDHR+ +T + +E V++G  +D  I+ LL  ++   I S +
Sbjct: 312 RSERIRTYNFPQGRVTDHRVGITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFA 367


>gi|331695519|ref|YP_004331758.1| peptide chain release factor 1 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950208|gb|AEA23905.1| Peptide chain release factor 1 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 366

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 204/355 (57%), Gaps = 18/355 (5%)

Query: 10  CDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L    A++EL +++           +L   YA I P+++        + +      + 
Sbjct: 13  DALLAEHADLELMLADPAVHADPARARRLGRRYAEIGPVVAVAKELASVRDDLAAARELA 72

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D             E   +   +  LE  +  LL+P+D  D    +LE+++G GG E+A
Sbjct: 73  ADD-------PTFGAEADDLAARVPALEARLAELLVPRDPHDADDVVLEVKSGEGGEESA 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR-----GVFSRMKFESG 181
           LF GDL RMY R+A  R W  E+L ++ +D GGYK++  ++  R     GV+S +KFE G
Sbjct: 126 LFAGDLVRMYTRFAESRGWSTEILDATTSDLGGYKDVTLSVRARVPAADGVWSALKFEGG 185

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEID--VDIPLEDIRIDTMRASGSGGQHVNT 239
           VHRVQRVP TE+ GR+HTSAA V V P+    D  ++I   D+R+D  R+SG GGQ VNT
Sbjct: 186 VHRVQRVPVTESQGRIHTSAAGVLVYPDTGADDAGIEIDDNDLRVDVFRSSGHGGQSVNT 245

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QNR RAM+VLR+RL  +  +  A   S  R+ Q+ 
Sbjct: 246 TDSAVRITHLPTGIVVSCQNERSQLQNRARAMEVLRSRLQALAEEEAAARASDARRSQVR 305

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + DRSERIRTYNF + RI DHR+    + L  VL G + D+I  L+ A +A+ + 
Sbjct: 306 TVDRSERIRTYNFPENRIADHRVGYKAHNLSAVLDGDLGDVIAALVAADRAETVA 360


>gi|313903604|ref|ZP_07836994.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466157|gb|EFR61681.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 372

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 176/349 (50%), Gaps = 6/349 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
               +   +     IE  M+E    D   +   +   +  +   +  Y+   ++ +DL  
Sbjct: 1   MIFDLAGKRREIERIEQAMTEPGFWDDPERAQHQVRQLKVLKGPVERYEALDRQLEDLQV 60

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      ++++      E+     ++ E   ++   LL     D    I+ +  G GG+E
Sbjct: 61  LAELAAEEADV--SVIPELEEGIAQVEEGLRQLELELLLTGPYDGYDAIVSLHPGAGGTE 118

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L+RMY R+A  R ++VEVL   + ++ G K +   + G   +  ++ E GVHR
Sbjct: 119 SQDWAQMLWRMYTRWAEDRGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHR 178

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+GR HTS A+V VLP+     +++I  ED+RID  RA G GGQHVN T+SA
Sbjct: 179 LVRISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESA 238

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI H+PTGI+    +E+SQH NR  AMK+L+ARL     ++   E +A R   +G    
Sbjct: 239 VRIVHLPTGIVATCQNERSQHSNRETAMKILKARLARYYEEQRLKEIAALR-GDVGEIAW 297

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             +IR+Y F     + DHR  + +  ++ V+ G +D  IN  L    A+
Sbjct: 298 GNQIRSYVFQPYTLVKDHRTGVEVGNVQAVMDGQLDVFINAYLKWEAAR 346


>gi|39546356|ref|NP_461957.2| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|267995195|gb|ACY90080.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|323131397|gb|ADX18827.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 358

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  +    Q   +   L  + 
Sbjct: 21  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDVSGLLELA 80

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 81  VEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 135

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K EV+  S+ +  G K     ISG   +  ++ E+GVHR+ 
Sbjct: 136 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 195

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 196 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 255

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ A    K  IG G  
Sbjct: 256 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG-- 313

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 314 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 356


>gi|271499213|ref|YP_003332238.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
 gi|270342768|gb|ACZ75533.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
          Length = 365

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I    Q   +   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQMVQGLDDVAGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +      +A    + +   ++ +  +     D   C L+++AG+GG+EA 
Sbjct: 88  VEADDEETFNEA-----IAELDLLEDKLGQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  S+ +  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|251790993|ref|YP_003005714.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
 gi|247539614|gb|ACT08235.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
          Length = 365

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I    Q   +   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQMVQGLDDVAGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    D       A   ++     ++ +  +     D   C L+++AG+GG+EA 
Sbjct: 88  VEEDDEDTFNDTV-----AELDQLESKLGQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  S+ +  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|295697362|ref|YP_003590600.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912]
 gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912]
          Length = 382

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 123/373 (32%), Positives = 186/373 (49%), Gaps = 32/373 (8%)

Query: 9   ICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAA---ISPIISKI 49
           + DL  R  EI                E RM+ +   D      +  A    +  ++ ++
Sbjct: 12  LHDLVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVNRLKDVVERV 71

Query: 50  SIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
                + ++ + L  +  +   ++ + ++         +  +         L+     D 
Sbjct: 72  EGLRSRVEDLEVLWELGHEEGDETVLGEIEAGITQVHSQLGQ-----FELELMLSGPYDR 126

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
            + I+E+  G GG+E+  +   L RMY R+A  R +KVE L     ++ G K +   I G
Sbjct: 127 NNAIVELHPGAGGTESQDWTAMLLRMYTRWAESRGYKVETLDYLPGEEAGVKSVTLLIKG 186

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMR 228
              +  +K E GVHR+ R+   +ASGR HTS A+V VLPE    +DVDI  ED++IDT R
Sbjct: 187 HNAYGYLKAERGVHRLVRISPFDASGRRHTSFASVDVLPELDESVDVDIRPEDLKIDTYR 246

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           +SG+GGQHVNTTDSAVRITHIPTGI+V   SE+SQ +NR  AMK+L ARLY+  R+    
Sbjct: 247 SSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKNRATAMKILAARLYERRRREQEE 306

Query: 288 ERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           + +A R  Q  I  G    +IR+Y F     + DHR  +    ++ V+ G ID  I+  L
Sbjct: 307 QIAALRGEQKEIAWG---SQIRSYVFHPYSMVKDHRTGVETGNVQAVMDGDIDAFIDAWL 363

Query: 345 TAHQAKMIGSASE 357
               A  +   +E
Sbjct: 364 RQRAAAQLDRDAE 376


>gi|227548000|ref|ZP_03978049.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079906|gb|EEI17869.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 357

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 146/356 (41%), Positives = 215/356 (60%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D  + +  I+ +M +       + + KL++ YA + PII+  +   + ++  +    +
Sbjct: 8   VDDYVSEYEGIQAQMGDPDVAGDAEQFRKLSKRYAELQPIINVYNELSEARENYEAAKEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +    +E         + +E +I  LE E+  LL P+D  D    I+EI+AG GG EA
Sbjct: 68  ASEDKEFAEEA-------VRLEGDIARLEEELADLLAPRDEHDGDDIIMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMY++Y        EVL  +++D GG K++   +  +       +S++KFE 
Sbjct: 121 ALFAGDLARMYQKYCEKNGLSWEVLDLAESDLGGAKDMTVAVKSKTPSRDGAWSKLKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PEA E+  VDI  +D+RID  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVYVFPEAEEVASVDIDEKDLRIDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PT I+V   +E+SQ QNR RAM+VL+ARL  +ER++   E +  R  Q+ 
Sbjct: 241 TDSAVRITHLPTNIVVTCQNERSQIQNRARAMQVLQARLDQLEREKADAEAAEGRASQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYN+ + RI+DHRIN     L+ VL G +D++I+ L    + + + +
Sbjct: 301 TMDRSERIRTYNWPENRISDHRINYKANNLDSVLDGNMDELISALQKHERQERLEA 356


>gi|157363244|ref|YP_001470011.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
 gi|157313848|gb|ABV32947.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
          Length = 347

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 218/342 (63%), Gaps = 11/342 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           M  +    I D+  +  E+E ++S S   ++   + + EY+ +   +       Q ++E 
Sbjct: 1   MKDIIESIIKDVNKKTIELEQKLSSSNLDIEQLREFSVEYSRLKEALEIYQQLKQVEEEM 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                 + +  S  E    A+ +   I             +      ++  + I EIRAG
Sbjct: 61  NFWQEAMKEDPSLEEDFLKARKQYEDIIS---------QLISHLLPFEEHNNVIFEIRAG 111

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EAALF  DL+RMY RYA  + W+VE+    D   GG+KEIV  + G+  +  +K+E
Sbjct: 112 TGGEEAALFAADLYRMYIRYAERKGWQVELSDFHDTGLGGFKEIVFFVKGKSAYKYLKYE 171

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE+SGR+HTS ATVAVLPE +++++ I  +D++IDT +ASG GGQ+VN 
Sbjct: 172 SGVHRVQRVPVTESSGRIHTSTATVAVLPEVSDVEIHIDPKDLKIDTFKASGHGGQYVNK 231

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRITH+PTGI+V   SE+SQHQNR RA+ +LRA+LY++E++++ ++ S  RK QIG
Sbjct: 232 TESAVRITHLPTGIIVSCQSERSQHQNRERALVILRAKLYEIEQEKINSQLSNQRKNQIG 291

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
           S +RSE+IRTYNF Q R+TDHRIN T Y+L+ +L G +D++I
Sbjct: 292 SAERSEKIRTYNFPQNRVTDHRINYTTYRLQEILDGDLDELI 333


>gi|150021273|ref|YP_001306627.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429]
 gi|149793794|gb|ABR31242.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429]
          Length = 358

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 156/340 (45%), Positives = 221/340 (65%), Gaps = 10/340 (2%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
              +E ++S   + +   K +E+Y+ +  I+     Y + ++                E+
Sbjct: 18  LKFLEEKLSSQLTPEEIKKYSEKYSKMKEIVELSKKYLELEE---------EIELWKEEM 68

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            +  + E+  +  + R++  E+  L+LPK+    K+  LEIRAGTGG EAALF  DL RM
Sbjct: 69  PEGFENEIEKLSDQQRKIMQELITLVLPKNEYSGKNVFLEIRAGTGGEEAALFAADLLRM 128

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y RY   + +K E++  +  D GGYKE+V  I G+ V + +K+ESGVHRVQRVP TE+ G
Sbjct: 129 YLRYVEKKNFKAEIVDENKTDLGGYKEVVVRIKGKNVGNLLKYESGVHRVQRVPTTESGG 188

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R+HTS ATVAVLPE + ++++I   DIRIDT RASG+GGQ+VN T+SAVRITHIPTGI+V
Sbjct: 189 RIHTSTATVAVLPEVSNVEIEINPSDIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVV 248

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
              SE+SQ QN+ +AM +LRARLY ++ +  A + S+NRK QIG+G+RSE+IRTYNF Q 
Sbjct: 249 TCQSERSQLQNKEQAMNILRARLYKLKLEEQAKKISSNRKSQIGTGERSEKIRTYNFPQN 308

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           R+TDHRIN T Y L+ VL G +D+ I  L+     + I +
Sbjct: 309 RVTDHRINYTSYNLQAVLDGELDEFITRLMRIDMLEQIEN 348


>gi|307129433|ref|YP_003881449.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
 gi|306526962|gb|ADM96892.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
          Length = 365

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I    Q   +   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQMVQGLDDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    D       A   ++     ++ +  +     D   C L+++AG+GG+EA 
Sbjct: 88  VEEDDEDTFNDTV-----AELDQLESKLGQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  S+ +  G K     I G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|186476207|ref|YP_001857677.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
 gi|184192666|gb|ACC70631.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
          Length = 359

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L +E   +  ++  +S  D   ++ +DL  + 
Sbjct: 22  DAKSVRLIEVNKELEDPNVWNDSQHAQALGKEKKLLEGVVDVLSSLDNDLRDTKDLFDMA 81

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N +  +    +       +          +  +  +  D  +  ++I+AG GG+EA 
Sbjct: 82  REENDEDTLVACEEDVAKLTTRVEDM-----EFRRMFSNPADPNNAFIDIQAGAGGTEAC 136

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  S+ D  G K     + G   +  ++ E+G+HR+ 
Sbjct: 137 DWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATIKVEGEYAYGFLRTETGIHRLV 196

Query: 187 RVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  E  ++++   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 197 RKSPFDSSGGRHTSFSSVFVYPEIDESFEIEVNPADLRIDTYRASGAGGQHINKTDSAVR 256

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIP+GI+V   +++SQH+NR  AM +L++RLY+ E ++  +E+      K  +G G  
Sbjct: 257 ITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQSEQDKLEAGKSDVGWG-- 314

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 315 -HQIRSYVLDNSRIKDLRTNVEISNTKSVLDGDLDAFISASLKQ 357


>gi|13508100|ref|NP_110049.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129]
 gi|2500138|sp|P75420|RF1_MYCPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1674166|gb|AAB96123.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129]
          Length = 359

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 134/348 (38%), Positives = 211/348 (60%), Gaps = 4/348 (1%)

Query: 9   ICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +  +     ++E  +++     +    + +E     P++ K   + +   +  +   ++ 
Sbjct: 11  VEKIVELAEQLEKDLNKPDLTFEQIKAINKELKHKQPLVVKFKEFKRLIDQALEAEAIL- 69

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           ++N   E+ D A+ E+  +   + E E  +  LLLP D ++ K+ I+E+R   GG E+ +
Sbjct: 70  ENNELKELHDEAKKELERVRSVVPEYEEALKLLLLPIDENNQKNVIVELRPAAGGDESCI 129

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F+ DLF MY  + + + WK   ++       G   +   ++G  VF+++KFESGVHRVQR
Sbjct: 130 FLADLFNMYRNFCSNKGWK-LQINEMIPSSVGLNFVSFEVNGVDVFAKLKFESGVHRVQR 188

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           VPATE+ GRVHTS  TVAVLP+   ++V I   D+R+DT RASG+GGQHVN T+SAVRIT
Sbjct: 189 VPATESKGRVHTSTVTVAVLPQLEAVEVHINPADLRVDTYRASGAGGQHVNRTESAVRIT 248

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V     KSQ  NR  AMK+LRA+L++  +    + ++  RK Q+GSGDR+E+I
Sbjct: 249 HLPTGIVVSCQEGKSQFTNRDTAMKMLRAKLWEKAQNEQLSTQAGLRKSQVGSGDRAEKI 308

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RTYN+ Q R+TDHRI LT+ KL  ++ G +D+II  L    + + + +
Sbjct: 309 RTYNYPQNRVTDHRIKLTVNKLNTIILGDLDEIIEALQADEKKQQLEN 356


>gi|260599230|ref|YP_003211801.1| peptide chain release factor 2 [Cronobacter turicensis z3032]
 gi|260218407|emb|CBA33491.1| Peptide chain release factor 2 [Cronobacter turicensis z3032]
          Length = 342

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  +    Q   +   L  + 
Sbjct: 5   DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETLDQMSQGLDDVAGLLELA 64

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +           ++     ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 65  VEADDEETFNEAVVE-----LDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 119

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K     ISG   F  ++ E+GVHR+ 
Sbjct: 120 DWASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTETGVHRLV 179

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 180 RKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 239

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTG +    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 240 ITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG-- 297

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 298 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 340


>gi|308187994|ref|YP_003932125.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
 gi|308058504|gb|ADO10676.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
          Length = 351

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  +    Q  ++ Q L  + 
Sbjct: 14  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLEQMSQGLEDVQGLLELA 73

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A    +     E+ +  +     D   C ++++AG+GG+EA 
Sbjct: 74  VEAEDEETFNEAV-----AELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  S+ +  G K +   +SG   F  ++ E+GVHR+ 
Sbjct: 129 DWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  + PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 189 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTG +    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 249 ITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG-- 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 307 -SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349


>gi|323526607|ref|YP_004228760.1| peptide chain release factor 2 [Burkholderia sp. CCGE1001]
 gi|323383609|gb|ADX55700.1| Peptide chain release factor 2 [Burkholderia sp. CCGE1001]
          Length = 367

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            D   R  E+   + +    +       L  E   +   + K++      ++ QDL  + 
Sbjct: 30  DDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLHNDLRDAQDLFEMA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  +         A  + + +   ++ +  +  +  D  +  L+I+AG GG+EA 
Sbjct: 90  REEGDDETLVACE-----ADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  +D D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +VDI   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+P+GI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G  
Sbjct: 265 ITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 323 -HQIRSYVLDNSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365


>gi|297570956|ref|YP_003696730.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931303|gb|ADH92111.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 370

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 136/360 (37%), Positives = 206/360 (57%), Gaps = 16/360 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +   +  IE +M+    +    KL      YA +  ++S+   +++ + +  D+  +I
Sbjct: 8   DAMVAEYQHIEEQMASPEVLARPEKLRSLGRRYAQLGRVVSRYRTWEKAEADLADIREII 67

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D+E+ +     +             +   L+P+D DD +  I+E++AG GG E+A
Sbjct: 68  ELGGDDAELFEEELPRLEEAASTAA---ASLRDALIPRDPDDSRDAIVEVKAGEGGEESA 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI--------SGRGVFSRMKF 178
           LF  DL RMY+RYA  + W V+ LS++  + GGYK+I   +           GV++ +KF
Sbjct: 125 LFAADLVRMYQRYAESKGWSVQTLSATHTELGGYKDIQLAVKSSSIPEDPADGVWAHLKF 184

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           E+GVHRVQRVPATE+ GR+HTSAA V V        +V +   ++RID  R+SG GGQ V
Sbjct: 185 EAGVHRVQRVPATESQGRIHTSAAGVLVFAEVDEPEEVQVADNELRIDVFRSSGPGGQSV 244

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI V+   EKSQ +NR  AM+VL ARL  ++ +  A + +  R+ Q
Sbjct: 245 NTTDSAVRITHLPTGITVSMQDEKSQIKNREAAMRVLLARLRQLQLEEQAAKEADQRRSQ 304

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSER+RTYNF + RI DHR     + L+ VL G ++ +I  L    +A+ +  A+
Sbjct: 305 VRTVDRSERVRTYNFPENRIADHRTGYKAHNLDAVLNGELEPVITSLREMDEAERLEQAA 364


>gi|120597725|ref|YP_962299.1| peptide chain release factor 2 [Shewanella sp. W3-18-1]
 gi|146294138|ref|YP_001184562.1| peptide chain release factor 2 [Shewanella putrefaciens CN-32]
 gi|120557818|gb|ABM23745.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           W3-18-1]
 gi|145565828|gb|ABP76763.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           putrefaciens CN-32]
          Length = 352

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 166/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 15  DAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +  +       +        + +  +     D  +C L+I++G+GG+EA 
Sbjct: 75  VEEEDEDTFNETTKELDYLESRLAD-----LEFRRMFSGPQDASNCYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 190 RKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESAVR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+L+++E  +   E+  + + K  IG G  
Sbjct: 250 ITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R ++     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|187918069|ref|YP_001883632.1| peptide chain release factor 1 [Borrelia hermsii DAH]
 gi|238689283|sp|B2RZQ6|RF1_BORHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119860917|gb|AAX16712.1| bacterial peptide chain release factor 1 [Borrelia hermsii DAH]
          Length = 357

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 244/354 (68%), Gaps = 5/354 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++  ++++   +E ++ +   V     Y K  +EY  +  I +K   Y+    +  
Sbjct: 1   MFLEKLSPIESKIKILEEKLQDINLVKNQKEYAKTVKEYNYLEKIKAKKDEYENILSQIN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++ +  +  E+++L + E+  +  +  E+E+ I  LLL +D +D K+ I+EIRAGT
Sbjct: 61  ENQKILSEEEN-LEMKELVKQELAHLNLKKDEVEHMIKILLLHQDENDSKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KE+   I G+ VF ++K ES
Sbjct: 120 GGEEAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE++GR+ TSAATVAVLPE  + D++I  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRVPITESNGRLQTSAATVAVLPEVEDTDIEINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY+ E  +   +RS +RK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFENLKKQEQRSNDRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           GDRSERIRTYNF Q R+TDHR N++LYKLE ++QG +D +++ L    Q + + 
Sbjct: 300 GDRSERIRTYNFPQNRVTDHRANISLYKLEEIMQGELDFLLDTLALKFQEQSLK 353


>gi|72382938|ref|YP_292293.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           NATL2A]
 gi|119361577|sp|Q46IT8|RF1_PROMT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72002788|gb|AAZ58590.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
           marinus str. NATL2A]
          Length = 365

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 223/354 (62%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++   K+ F  +EL++++        +L     E + + P+++        ++E  +  
Sbjct: 8   KRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIEKECLEAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+  LA+ E+  +E    EL  ++   LLPKD  D++S +LEIRAG GG+
Sbjct: 68  GLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEIRAGAGGN 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA L+ GDL RMYERY     W V+ +SS++ D GG++E++ ++ G  V+S++KFE+GVH
Sbjct: 128 EACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPSTESQGRVHTSTATVAVMPEADPVEVKIESTDLEISTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           + + H P+GI +  + E+SQ QNR RAM++LRA+L ++E      +  + R  Q+G+GDR
Sbjct: 248 IDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELELAEANAKERSARLSQVGTGDR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+ +  + LE VL G ++D+I   +   Q + +   S
Sbjct: 308 SEKIRTYNYKDNRTTDHRLGVN-FPLEQVLSGQLEDVIGACIAEEQKRQMEELS 360


>gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 383

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 118/354 (33%), Positives = 180/354 (50%), Gaps = 7/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   ++R A +E  M+     D   +  +  A ++ + S +    + +   QD    + 
Sbjct: 27  DVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMNGVKSVVDTMRRLESLLQDAEVALQ 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +    A+   LA + +    E      L+     D  + ILE+  G GG+E+  
Sbjct: 87  LAQEEDDHDLFAEANRLAEQLKSEMDE--FELQLMLSGEYDKNNAILELHPGAGGTESQD 144

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +KVEVL     ++ G K +   + G   +  +K E GVHR+ R
Sbjct: 145 WASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVR 204

Query: 188 VPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   +ASGR HTS A+V V+PE    +  ++I  E++RIDT R++G+GGQHVNTTDSAVR
Sbjct: 205 ISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+V   SE+SQ QNR RAM++L++RL    R+    E +  R  Q        
Sbjct: 265 ITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQLRGEQ-KEIAWGS 323

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +IR+Y F     + DHR N      + V+ G ID  I+  L    A+     +E
Sbjct: 324 QIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHAYLRWQLAREQQRENE 377


>gi|32475815|ref|NP_868809.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1]
 gi|81659907|sp|Q7ULT3|RF1_RHOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32446358|emb|CAD76186.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1]
 gi|327538345|gb|EGF25018.1| peptide chain release factor 1 [Rhodopirellula baltica WH47]
          Length = 360

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 145/355 (40%), Positives = 223/355 (62%), Gaps = 5/355 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQ 57
           M       + +   RF ++E  MS+   +    +++    E+  ++ + ++   + +   
Sbjct: 1   MSGSIRDILEEKLARFEKLENDMSDPEVLSDGARMSATAREHGGLNRLANQYRTFKRLTD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           E      ++ D   D + R++A+ E+ ++ KE   +  ++  L +  +      C++EIR
Sbjct: 61  EIHQCVAMVADAE-DVDEREMAESEMESLRKERETVWEDLLSLTVGGEDSHRTRCVMEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  DLF MY RYA    WK E++ +S  + GG+K++  T+ G  VF  ++
Sbjct: 120 AGTGGDEAALFARDLFEMYTRYAEKVGWKTELMDASPTEMGGFKDVTLTLEGDNVFRDLQ 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +ESG HRVQRVP TE  GRVHTSAATVAV+PE  ++++D+  +D R D   ASG GGQHV
Sbjct: 180 YESGGHRVQRVPETETQGRVHTSAATVAVMPEPEDVEIDLKPDDYRKDFFGASGPGGQHV 239

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVR+TH  TGI+V    EKSQH+N  +A++VL+AR+Y+ +R+  A +++  RK  
Sbjct: 240 NKTDSAVRLTHHETGIVVQCQDEKSQHKNLAKALRVLKARIYEKKREEEAAKQAEARKGL 299

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           IGSGDRS+RIRTYNF Q R+TDHRINLT+YKL+ ++ G ++ +   L+   + ++
Sbjct: 300 IGSGDRSQRIRTYNFPQNRLTDHRINLTIYKLDQIIAGDLNPVTEALIEYDRDQL 354


>gi|301633339|gb|ADK86893.1| peptide chain release factor 1 [Mycoplasma pneumoniae FH]
          Length = 359

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 134/348 (38%), Positives = 210/348 (60%), Gaps = 4/348 (1%)

Query: 9   ICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +  +     ++E  +++     +    + +E     P++ K   + +   +  +   ++ 
Sbjct: 11  VEKIVELAEQLEKDLNKPDLTFEQIKAINKELKHKQPLVVKFKEFKRLIDQALEAEAIL- 69

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           ++N   E+ D A+ E+  +   + E E  +  LLLP D ++ K+ I+E+R   GG E+ +
Sbjct: 70  ENNELKELHDEAKKELERVRSVVPEYEEALKLLLLPIDENNQKNVIVELRPAAGGDESCI 129

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F+ DLF MY  +   + WK   ++       G   +   ++G  VF+++KFESGVHRVQR
Sbjct: 130 FLADLFNMYRNFCTNKGWK-LQINEMIPSSVGLNFVSFEVNGVDVFAKLKFESGVHRVQR 188

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           VPATE+ GRVHTS  TVAVLP+   ++V I   D+R+DT RASG+GGQHVN T+SAVRIT
Sbjct: 189 VPATESKGRVHTSTVTVAVLPQLEAVEVHINPADLRVDTYRASGAGGQHVNRTESAVRIT 248

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V     KSQ  NR  AMK+LRA+L++  +    + ++  RK Q+GSGDR+E+I
Sbjct: 249 HLPTGIVVSCQEGKSQFTNRDTAMKMLRAKLWEKAQNEQLSTQAGLRKSQVGSGDRAEKI 308

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RTYN+ Q R+TDHRI LT+ KL  ++ G +D+II  L    + + + +
Sbjct: 309 RTYNYPQNRVTDHRIKLTVNKLNTIILGDLDEIIEALQADEKKQQLEN 356


>gi|158312864|ref|YP_001505372.1| peptide chain release factor 1 [Frankia sp. EAN1pec]
 gi|238686837|sp|A8L3V1|RF1_FRASN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158108269|gb|ABW10466.1| peptide chain release factor 1 [Frankia sp. EAN1pec]
          Length = 356

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 144/357 (40%), Positives = 210/357 (58%), Gaps = 18/357 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  +    A+IE R+++    +      +LT  YA ++  +      ++ + + +     
Sbjct: 5   LAGMIAEHADIEKRLADPDIHNDPARARELTRRYAELATPVDLAQRLERVEGDLETAREF 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D   RD       +       L       L+P D DD +  ILE++AG GG E+
Sbjct: 65  A---EQDPSFRDEVVALEASQADLAARLRAY----LVPVDPDDSRDAILEVKAGAGGEES 117

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF GDL RMY RYA  R W+ ++L ++ +D GGY+++   +        G+GVF R++F
Sbjct: 118 ALFAGDLLRMYLRYAERRGWRTQILDANPSDLGGYRDVSVAVKSRGTAAPGQGVFGRLRF 177

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E GVHRVQRVP TE++GR+HTSAA V VLPEAA++D+++   D+RID  R+SG GGQ VN
Sbjct: 178 EGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAADVDIEVDPNDLRIDVFRSSGPGGQSVN 237

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PTG++V   +EKSQ QN+  AM++LRARL    R++     +A R  Q+
Sbjct: 238 TTDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLLAAAREKAETAAAAARASQV 297

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            + DRSE++RTYNF + RI+DHRI    + LE VL G +D +I  L  A     + +
Sbjct: 298 RTVDRSEKVRTYNFPENRISDHRIGYKAHNLEAVLDGDLDAVIEALTEADLESRMAA 354


>gi|197285860|ref|YP_002151732.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
 gi|238693208|sp|B4F0M7|RF2_PROMH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|194683347|emb|CAR44054.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
          Length = 365

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 182/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  I   +Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D E  + A  E+  + K++ +LE    +  +     D   C L+++AG+GG+EA 
Sbjct: 88  VEA-DDEETFNEAVAELEGLNKKLEQLE----FRRMFSGEYDSADCYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  SD D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE    ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTG++    +++SQH+N+ +AMK ++A+LY++E ++   ++    + K  IG G  
Sbjct: 263 ITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|124026680|ref|YP_001015795.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           NATL1A]
 gi|229470356|sp|A2C4X1|RF1_PROM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123961748|gb|ABM76531.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
           NATL1A]
          Length = 365

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 223/354 (62%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++   K+ F  +EL++++        +L     E + + P+++        ++E  +  
Sbjct: 8   KRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIEKECLEAK 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D E+  LA+ E+  +E    EL  ++   LLPKD  D++S +LEIRAG GG+
Sbjct: 68  GLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEIRAGAGGN 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA L+ GDL RMYERY     W V+ +SS++ D GG++E++ ++ G  V+S++KFE+GVH
Sbjct: 128 EACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQLKFEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP+TE+ GRVHTS ATVAV+PEA  ++V I   D+ I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPSTESQGRVHTSTATVAVMPEADPVEVKIESTDLEISTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           + + H P+GI +  + E+SQ QNR RAM++LRA+L ++E      +  + R  Q+G+GDR
Sbjct: 248 IDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEIAEANAKERSARLSQVGTGDR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+ +  + LE VL G ++D+I   +   Q + +   S
Sbjct: 308 SEKIRTYNYKDNRTTDHRLGVN-FPLEQVLSGQLEDVIGACIAEEQKRQMEELS 360


>gi|15642771|ref|NP_230312.1| peptide chain release factor 2 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 365

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 181/343 (52%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +       +    L +E +A+  ++  I   D+   + + L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVEGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D E  D    E+  +E ++ +LE    +  +     D   C L+++AG+GG+EA 
Sbjct: 88  IEAE-DQETFDEIGPELDELEAKLEQLE----FRRMFSGDHDSSDCYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K EV+  S+ D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 143 DWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  + PE  E  D++I   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E ++   E+ AN   K  IG G  
Sbjct: 263 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362


>gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Lutiella nitroferrum 2002]
 gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Lutiella nitroferrum 2002]
          Length = 349

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 176/340 (51%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +R  E+     +    +   +   L  E   +  ++  I        + +DL  +  + N
Sbjct: 16  DRLEEVVRLTEDPDVWNDPKRAQDLGRERKQLEDVVLVIDRISGAVNDSRDLFDMAREEN 75

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
                     + V     E      ++ +  +  D  D  +C L+I+AG GG+EA  + G
Sbjct: 76  D-----ADTILAVQDDLAEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTEAQDWAG 130

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY RYA  + ++VE+L  S+ +  G       ISG   +  ++ E GVHR+ RV  
Sbjct: 131 MLLRMYTRYAERKGFRVEILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHRLVRVSP 190

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS ++V V PE      ++I   D+R+DT RASG+GGQH+N TDSAVRITH 
Sbjct: 191 FDSNARRHTSFSSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSAVRITHN 250

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI+V   +++SQH+NR  AM++LRA+LY++E K+    +    + K  +G G    +I
Sbjct: 251 PTGIVVQCQNDRSQHRNRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWG---HQI 307

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y F Q RI D R +  +  ++ V+ G +D  I   L  
Sbjct: 308 RSYVFDQSRIKDLRTSYEVGNIKSVMDGDLDGFIEESLKQ 347


>gi|91794477|ref|YP_564128.1| peptide chain release factor 2 [Shewanella denitrificans OS217]
 gi|91716479|gb|ABE56405.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           denitrificans OS217]
          Length = 352

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 175/343 (51%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            + K R  E+ L +  S   +       L +E +A+  ++  I   D   ++ + L  + 
Sbjct: 15  ANKKERLEEVSLELESSAVWNEPERAQALGKERSALEAVVKTIDDLDSGLEDIEGLVELA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +  + A  E+  +E+ + +LE    +  +    +D   C L+I++G+GG+EA 
Sbjct: 75  IEE-DDEDTFNEASAELDELERRLEDLE----FRRMFSGPNDSADCYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         ++RIDT RASG+GGQHVN T+SA+R
Sbjct: 190 RKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPSELRIDTYRASGAGGQHVNKTESAIR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDR 302
           ITH+PT  +V   S +SQH+N+  AMK L+A+LY++E  +     + + + K  IG G  
Sbjct: 250 ITHLPTNTVVQCQSGRSQHKNKDSAMKQLKAKLYELEMMKQNVDKQAAEDAKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDARIKDLRTGVENRNTQTVLDGDLDKFIEASLK 349


>gi|323340175|ref|ZP_08080439.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
 gi|323092366|gb|EFZ34974.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
          Length = 358

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 183/345 (53%), Gaps = 10/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A+ E +M++    +   +  +     + + +K   ++Q ++  +DL  ++ 
Sbjct: 12  DLDGLQEAIADNESKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEAIEDLEVLLE 71

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D +   ++++       + +  E      LL     D  + ILE+  G GG+E+  
Sbjct: 72  MVQEDDDDELVSELSEKFELAQKKMQE--YQLSLLLNGKYDKDNAILELHPGAGGTESQD 129

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    + VE       D+ G K +  TISG   +  ++ E GVHR+ R
Sbjct: 130 WGSMLLRMYTRWAEQHGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEKGVHRLVR 189

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS  +V V+PE   +++VD+  EDI+++  R+SG+GGQH+N T SAVR+
Sbjct: 190 ISPFDSAGRRHTSFCSVNVMPELDDDVEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRL 249

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRS 303
            HIPTGI+V + +++SQ QNR  A K+LR++LY +E +    +R+A +  Q  IG G   
Sbjct: 250 IHIPTGIVVSSQAQRSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLDIGWG--- 306

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y F     + DHR N     +  V+ G +D  IN  L  +
Sbjct: 307 SQIRSYVFHPYSMVKDHRTNYETGNISSVMDGDLDGFINAYLQWN 351


>gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
 gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
          Length = 349

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               ++  ++   + +    +   K   L +E  ++  ++  ++       +  +L  + 
Sbjct: 12  AAKSDKLEQVNAELEDPDVWNDPKKAQDLGKEKKSLENVVLSLTRIKSGLDDAAELFEMA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  ++ +    +  +++  +     + +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 72  KEEQDDDTLKAVDDDTLELLDQIEK-----LEFRRMFSNPMDPCNCFIDIQAGAGGTEAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + R Y RY   + +   +L  SD +  G K     + G   +  ++ E+GVHR+ 
Sbjct: 127 DWASMILRQYLRYCERKGFNATILEQSDGEVAGIKTATIKVEGDYAYGYLRTETGVHRLV 186

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++S   HTS  ++ V PE    I++DI   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 187 RKSPFDSSNGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH PTGI+V   +++SQH+NR  A ++L++RL+++E ++  +E+    + K  +G G  
Sbjct: 247 LTHAPTGIVVQCQNDRSQHRNRADAWEMLKSRLFELELRKRMSEQQKLEDSKTDVGWG-- 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N      + VL G +DD I   L  
Sbjct: 305 -HQIRSYVLDNSRIKDLRTNHETGNTKAVLDGDLDDFILESLKQ 347


>gi|239928894|ref|ZP_04685847.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291437221|ref|ZP_06576611.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291340116|gb|EFE67072.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
          Length = 355

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 144/349 (41%), Positives = 218/349 (62%), Gaps = 18/349 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           +L + YA ++PI++    + Q   + +   
Sbjct: 3   EAVEELVAEHADLEKKLADPSVHSDQANARRLNKRYAELTPIVATYRSWRQTGDDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +E++  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAADDPD-------FAAEVRELEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRM 176
           E+ALF GDL RMY RYA    WK E++ +++++ GGYK++   +        G+GV++R+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKARGQVEPGQGVWARL 175

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG GGQ 
Sbjct: 176 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVDVEINPNDLRIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG++    +EKSQ QN+ +A+++LR+RL  + ++    E +  R+ 
Sbjct: 236 VNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAMAQEEAEREAADARRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +  +I   +
Sbjct: 296 QVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLGAVIQACV 344


>gi|242240700|ref|YP_002988881.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
 gi|242132757|gb|ACS87059.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
          Length = 365

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +       D    L +E +++  I+  I   +Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEMIVDTIEQMNQGLEDVTGLLDLA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +           ++     ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 88  VEEDDEETFNETIIE-----LDQLENKLGQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K EV+  S+ +  G K     + G   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAESKGFKTEVIEESEGEVAGIKSATIKVVGEYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AM+ L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEFELQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|307729220|ref|YP_003906444.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
 gi|307583755|gb|ADN57153.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
          Length = 367

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            D   R  E+   + +    +       L  E   +   + K++  D   ++ QDL  + 
Sbjct: 30  DDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDTQDLFEMA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  +         A  + + +   ++ +  +  +  D  +  L+I+AG GG+EA 
Sbjct: 90  REEGDDETLLACE-----ADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  +D D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +VDI   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+P+GI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G  
Sbjct: 265 ITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 323 -HQIRSYVLDNSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365


>gi|203284116|ref|YP_002221856.1| peptide chain release factor A [Borrelia duttonii Ly]
 gi|201083559|gb|ACH93150.1| peptide chain release factor A [Borrelia duttonii Ly]
          Length = 359

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 159/358 (44%), Positives = 245/358 (68%), Gaps = 6/358 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  ++++   +E ++ +   +       K+ +EY  +  I  K   Y     
Sbjct: 1   MKMFL-EKLNPIESKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEKIKEKKDEYQHILN 59

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++ + ++  E++DL + E+  +  +  E+EN I  LLL +D +DDK+ I+EIR
Sbjct: 60  QINENQKILSEEDN-LEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KE+   I G+ VF ++K
Sbjct: 119 AGTGGEEAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
            ESGVHRVQR+P TE++G++ TSAATVAVLPE  + D++I  +D+RID  R+SG+GGQHV
Sbjct: 179 HESGVHRVQRIPITESNGKLQTSAATVAVLPEVEDTDIEINDKDLRIDVYRSSGAGGQHV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+    +E+SQH+N+ +AMK+LRARLY++E  +   +RS +RK Q
Sbjct: 239 NTTDSAVRITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQEQRSNDRKQQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +GSGDRSERIRTYNF Q R+TDHR N++LYKLE ++QG +D ++N L    Q + + +
Sbjct: 299 VGSGDRSERIRTYNFPQNRVTDHRANISLYKLEEIMQGELDSLLNTLALKFQEQSLKN 356


>gi|256751358|ref|ZP_05492237.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256749740|gb|EEU62765.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 246

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 147/244 (60%), Positives = 189/244 (77%), Gaps = 1/244 (0%)

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           +EIRAG GG EAALF  DLFRMY  YA  + WKVE++SS++ D GG+KE++  ISG+G +
Sbjct: 1   MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSY 60

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           SR+K+ESGVHRVQRVP TEA GR+HTS ATVAVLPE  E+DV+I   DI+ID  R+ G G
Sbjct: 61  SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIKIDVFRSGGHG 120

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVR+THIPTGI+V    E+SQ QNR RA+K+LRA+LY++  +    E +  
Sbjct: 121 GQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAET 180

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           RK Q+G+G+RSERIRTYNF QGR+TDHRI LTLY+L+ VL G +D+II+ L+   QA+ +
Sbjct: 181 RKSQVGTGERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKL 240

Query: 353 GSAS 356
            + +
Sbjct: 241 KNMN 244


>gi|217974576|ref|YP_002359327.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223]
 gi|254790920|sp|B8E5Q1|RF2_SHEB2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|217499711|gb|ACK47904.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223]
          Length = 365

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 166/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 28  DAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    + ++       +        + +  +     D  +C L+I++G+GG+EA 
Sbjct: 88  IEEEDEDTFNETSKELDYLESRLAD-----LEFRRMFSGPQDASNCYLDIQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 143 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RIDT RASG+GGQHVN T+SA+R
Sbjct: 203 RKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESAIR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+L+++E   +    + + + K  IG G  
Sbjct: 263 ITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|323356873|ref|YP_004223269.1| protein chain release factor A [Microbacterium testaceum StLB037]
 gi|323273244|dbj|BAJ73389.1| protein chain release factor A [Microbacterium testaceum StLB037]
          Length = 368

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 138/361 (38%), Positives = 199/361 (55%), Gaps = 18/361 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  L +   EIEL +++        +       YA ++ I+     +     + +   
Sbjct: 13  ESVRGLIDEHREIELELNDPAVHADAARAKRVNRRYAELNRIVHAYQAWVSASDDLEAAR 72

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D             + +    L      LL+P+D DD +  I+EI+ G GG+
Sbjct: 73  ELARE---DEAFAAEIPALEERVSETQERL----RRLLIPRDPDDARDVIMEIKGGEGGA 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           E+ALF  DL RMY +YAA   WK E+L  +++D GGYK++   I        +GV++ +K
Sbjct: 126 ESALFAADLLRMYLQYAASMGWKTELLERTESDLGGYKDVQVAIKGSSSDPAQGVWAHLK 185

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           +E GVHRVQRVPATE+ GR+HTS   V V PE  E +   I   D++ID  R+SG GGQ 
Sbjct: 186 YEGGVHRVQRVPATESQGRIHTSTTGVLVFPEVDEPEEVAIDPNDLKIDVFRSSGPGGQS 245

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V+  +EKSQ QNR   M+VLRARL   +++      +  R+ 
Sbjct: 246 VNTTDSAVRITHVPTGIVVSMQNEKSQLQNREAGMRVLRARLLAKQQEERDAVAADARRS 305

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI   DRSERIRTYNF + RI DHR     Y L+ V+ G +  II   +TA +   + + 
Sbjct: 306 QIRGMDRSERIRTYNFPENRIADHRTGYKAYNLDQVMDGALGPIIESAITADEEARLAAL 365

Query: 356 S 356
           +
Sbjct: 366 A 366


>gi|261338133|ref|ZP_05966017.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093]
 gi|270276761|gb|EFA22615.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093]
          Length = 362

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 200/353 (56%), Gaps = 20/353 (5%)

Query: 14  NRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE RM++           KL   +A ++ I+     Y     + +    +  +  
Sbjct: 14  EEYRNIEQRMAQPDVASDPNAMRKLGRRHAELAGIVGPYQRYRSMIDDLEAAREMAAE-- 71

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D +  + A+     ++     L       L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 72  -DPDFAEEAKRLETQLDDAAEAL----RTALIPRDPDDARDMIMEIKAGTGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V + S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 127 DLLRMYTRYAEKRGWSVTIQSENSTELGGVKDVQLAIRAKGTVAPEDGVWASLKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  + 
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDVQADEADRLA 359


>gi|302554164|ref|ZP_07306506.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM
           40736]
 gi|302471782|gb|EFL34875.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM
           40736]
          Length = 358

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 216/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI++    + Q   + +   
Sbjct: 3   EAVAELVAEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWTQTGDDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +E++  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAADDPD-------FAAEVKDLEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ +++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGQGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA EIDV+I   D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEIDVEINPNDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +A+++LR+RL    ++    E +  
Sbjct: 236 GQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +  +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLGAVIQACV 347


>gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2]
 gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas
           naphthalenivorans CJ2]
          Length = 347

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 167/340 (49%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +  E+   + +    D      +L  E  ++  ++  +   +Q+  +  +L  +  D N
Sbjct: 14  RKLNEVNAALEDPKVWDNPKRAQELGREKKSLEDVVLILDRLEQELSDNTELFEMSKDDN 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            ++ +R +         +  +       +  +  +  D  +C L+I+AG GG+EA  +  
Sbjct: 74  DEAGMRAIEGEAAKVAAEVEKM-----EFRRMFNNPADPLNCFLDIQAGAGGTEACDWAS 128

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L R Y +YA  + +K  +   S  D  G K     I G   F  ++ E+GVHR+ R   
Sbjct: 129 MLLRQYLKYAERKGFKTTIEDESAGDTAGIKGATIKIEGEYAFGLLRTETGVHRLVRKSP 188

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++SG  HTS A+V V PE  +  ++DI   D+R DT RASG+GGQH+N TDSAVR+THI
Sbjct: 189 FDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHI 248

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI+V     +SQH NR  A K LR+RLYD E ++    +    + K  +G G    +I
Sbjct: 249 PTGIVVQCQEGRSQHGNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWG---HQI 305

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     RI D R N      + VL G +D  I   L  
Sbjct: 306 RSYVLDNSRIKDLRTNYETSATQKVLDGDLDPFIEASLKQ 345


>gi|32267276|ref|NP_861308.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
 gi|46576742|sp|Q7VFA0|RF1_HELHP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32263329|gb|AAP78374.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
          Length = 355

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 167/359 (46%), Positives = 240/359 (66%), Gaps = 9/359 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +   ++  +  R+ EI   +S      ++    +L++E + I  I      Y    +   
Sbjct: 1   MLIDKLKPIVARYDEISSLLSSESVLSNIKQLTELSKEQSDIESIAQNAKTYFSILENIV 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++     D E+ +LA+ E+  +E     LE EI  LL+PKD +D+K+  LEIRAGT
Sbjct: 61  QNKALLE----DKELGELAKEELKDLESAKATLEEEIKLLLIPKDPNDNKNIYLEIRAGT 116

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA +FVGDLF+ Y RYA L+KWKVE++SS++N+ GGYKE++A + G G +S++KFE 
Sbjct: 117 GGDEAGIFVGDLFKAYCRYADLQKWKVEIISSNENNVGGYKEVIALVKGNGAYSKLKFEG 176

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE+ GR+HTSA TVA++PE  +++++I   D++ID  R+ G GGQ VNTT
Sbjct: 177 GTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEININPNDLKIDVFRSGGHGGQSVNTT 236

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTGI V+   EKSQH+N+ +A+K+L+ARLY+ E +    +    RK Q+GS
Sbjct: 237 DSAVRITHIPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQNAQNKEARKTQVGS 296

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYN+ Q R+TDHRI LTLY LE ++ G  +D+ INPL+   Q++ +G+  +
Sbjct: 297 GDRSERIRTYNYPQNRLTDHRIGLTLYSLEEIMLGGLLDEFINPLIAHAQSQAMGNIEQ 355


>gi|312959346|ref|ZP_07773863.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
 gi|311286063|gb|EFQ64627.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
          Length = 430

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +      +L  E AA++ I+  +   +    + +DL  + 
Sbjct: 93  DQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLADCRDLLDMA 152

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +  + D+      A    + E   ++ +  +     D  +  L+I+AG+GG+EA 
Sbjct: 153 VEEDDEGAVGDVV-----AELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQ 207

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +   ++  S  +  G K     I G   F  ++ E GVHR+ 
Sbjct: 208 DWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLV 267

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS + V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 268 RKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVR 327

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH N+  AMK+LRA+LY+ E ++     +   + K  IG G  
Sbjct: 328 ITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWG-- 385

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R N+     + VL G ID+ +   L 
Sbjct: 386 -HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 427


>gi|113969170|ref|YP_732963.1| peptide chain release factor 2 [Shewanella sp. MR-4]
 gi|114048688|ref|YP_739238.1| peptide chain release factor 2 [Shewanella sp. MR-7]
 gi|113883854|gb|ABI37906.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           MR-4]
 gi|113890130|gb|ABI44181.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           MR-7]
          Length = 352

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 166/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 15  DAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +  +       +        + +  +     D  +C L+I++G+GG+EA 
Sbjct: 75  IEEEDEDTFNETTKELDYLESRLAE-----LEFRRMFSGPQDASNCYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 190 RKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESAVR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+L+++E  +   E+  + + K  IG G  
Sbjct: 250 ITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R ++     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|315268921|gb|ADT95774.1| Peptide chain release factor 2 [Shewanella baltica OS678]
          Length = 365

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 166/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 28  DAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    + ++       +        + +  +     D  +C L+I++G+GG+EA 
Sbjct: 88  IEEEDEDTFNETSKELDYLESRLAD-----LEFRRMFSGPQDASNCYLDIQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 143 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RIDT RASG+GGQHVN T+SA+R
Sbjct: 203 RKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESAIR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+L+++E   +    + + + K  IG G  
Sbjct: 263 ITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|269219853|ref|ZP_06163707.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210758|gb|EEZ77098.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 365

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 140/368 (38%), Positives = 208/368 (56%), Gaps = 17/368 (4%)

Query: 3   FLSHKQI-CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQE 58
             S  ++   +     +IE  MS   ++ +  K   L   YA +  ++     Y + + +
Sbjct: 1   MSSQIELAEQVLAEHRKIETEMSSPEALSSPEKMKSLGRRYAELGRVVRVYQAYRRAEAD 60

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             +   ++     D+E+       +     +       +   L+P+D DD +  I+E++A
Sbjct: 61  LSETREIVEAGGEDAELFRPELPGLQEAYAQAE---AALKDALIPRDPDDARDAIVEVKA 117

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI--------SGR 170
           G GG E+ALF GDL RMYERYA    W+ ++LSS   + GG+K++   +           
Sbjct: 118 GEGGEESALFAGDLLRMYERYAERMGWQTQILSSVPTELGGFKDVQLAVRLRSAPEDPAD 177

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRA 229
           GV++ +KFE+GVHRVQRVP TE+ GR+HTSAA V V        +V+I   DIR+D  R+
Sbjct: 178 GVWAHLKFEAGVHRVQRVPVTESQGRLHTSAAGVLVFAEVDDPGEVEIADADIRVDVFRS 237

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQ VNTTDSAVRITHIPTG++V    EKSQ +NR  AM+VLRARL  ++ ++ A E
Sbjct: 238 SGPGGQSVNTTDSAVRITHIPTGLVVSCQDEKSQIKNREAAMRVLRARLRQMQLEQQAEE 297

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            +A R+ Q+ + DRSERIRTYNF + RI+DHR     Y L+ VL G +  +++      +
Sbjct: 298 NAAMRRSQVRTVDRSERIRTYNFPENRISDHRTGYKAYNLDQVLAGNLGPLVDSAREMDE 357

Query: 349 AKMIGSAS 356
           A+ + S  
Sbjct: 358 AERMASQE 365


>gi|302521935|ref|ZP_07274277.1| peptide chain release factor 1 [Streptomyces sp. SPB78]
 gi|318060718|ref|ZP_07979441.1| peptide chain release factor 1 [Streptomyces sp. SA3_actG]
 gi|318075509|ref|ZP_07982841.1| peptide chain release factor 1 [Streptomyces sp. SA3_actF]
 gi|333024405|ref|ZP_08452469.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071]
 gi|302430830|gb|EFL02646.1| peptide chain release factor 1 [Streptomyces sp. SPB78]
 gi|332744257|gb|EGJ74698.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071]
          Length = 357

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 142/351 (40%), Positives = 214/351 (60%), Gaps = 20/351 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    AE+E ++++           +L++ YA ++PI+     +     +     
Sbjct: 3   EAVEELIGEHAELEQKLADPSVHADQANARRLSKRYAELTPIVGTYRAWRATGDDIATAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +             EV  +++   EL  ++  LL+P+D  D+K  ILEI+AG GG 
Sbjct: 63  ELAAEDPE-------FAAEVKELDERREELTEKLRLLLVPRDPSDEKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG---------RGVFS 174
           E+ALF GDL RMY RYA    WK E+L +++++ GGYK++   +           +GV++
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVAVKTKGNANPEPGQGVWA 175

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
           RMK+E GVHRVQRVP+TE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG GG
Sbjct: 176 RMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEEVDVEINPNDLRIDVYRSSGPGG 235

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVRITH+PTG++    +EKSQ QN+ +A+++LR+RL    ++    E +  R
Sbjct: 236 QSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADAR 295

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           + Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RSQVRTVDRSEKIRTYNFPENRISDHRVGYKAYNLDQVLDGDLDAVIQACV 346


>gi|317121051|ref|YP_004101054.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           marianensis DSM 12885]
 gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           marianensis DSM 12885]
          Length = 416

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 176/346 (50%), Gaps = 6/346 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +     IE  M++    D   +  ++   +  +   +  Y+  +++  DL  +  
Sbjct: 24  DLAGKRREIERIEQAMTDPSFWDEPDRAQQQVRQLKVLKGPVEHYEALERQLDDLQVLAE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               ++++      E+     +  E   ++   LL     D    I+ +  G GG+E+  
Sbjct: 84  LAAEEADV--SVIPELEEGIAKAEEGLRQLELDLLLNGPYDGYDAIVSLHPGAGGTESQD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+A    ++VEVL   + ++ G K +   + G   +  ++ E GVHR+ R
Sbjct: 142 WAQMLWRMYTRWAEDHGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+GR HTS A+V VLP+     +++I  ED+RID  RA G GGQHVN T+SAVRI
Sbjct: 202 ISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRI 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTGI+    +E+SQH NR  AMK+L+ARL     ++   E +A R   +G      +
Sbjct: 262 VHLPTGIVATCQNERSQHANRETAMKILKARLARYYEEQRLKEIAALR-GDVGEIAWGNQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y F     + DHR  + +  ++ V+ G++D  IN  L    A+
Sbjct: 321 IRSYVFQPYTLVKDHRTGVEVGNVQAVMDGHLDPFINAYLRWEAAR 366


>gi|329939826|ref|ZP_08289127.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus
           M045]
 gi|329301396|gb|EGG45291.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus
           M045]
          Length = 361

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 141/355 (39%), Positives = 214/355 (60%), Gaps = 24/355 (6%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           +L + YA ++PI++    + +   +     
Sbjct: 3   EAVEELVGEHADLEKKLADPAVHADQANARRLNKRYAELTPIVATYRSWKRTGDDLGTAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D             EV  +E++  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  EFAADDPD-------FVAEVKELEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------------ 171
           E+ALF GDL RMY RYA    WK E++ +++++ GGYK++   +  +             
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKPHGVSQGATEPGQ 175

Query: 172 -VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
            V++R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+S
Sbjct: 176 GVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVDVEINPSDLRIDVYRSS 235

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +A+++LR+RL    ++    E 
Sbjct: 236 GPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEKEA 295

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           +  R+ Q+ + DRSE+IRTYN+ + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 ADARRSQVRTVDRSEKIRTYNYPENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 350


>gi|325283363|ref|YP_004255904.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP]
 gi|324315172|gb|ADY26287.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP]
          Length = 377

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 142/360 (39%), Positives = 221/360 (61%), Gaps = 14/360 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA----YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           ++ +L + F  +E  + +   +      Y +LT  +  +SP+++    Y+   QE+QD  
Sbjct: 5   RLSELVSEFGMVERALGDPAVLAEGGREYTRLTRRHRELSPLVTLYREYETLGQEQQDSR 64

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     D E+R++AQ E+  I   + E+E+E+  LLLP D  D    +LEIR+G GG+
Sbjct: 65  ELLA----DPELREMAQAELERISARLAEVESELEVLLLPTDPLDPNDAVLEIRSGAGGA 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DL RMY RYA     ++EVL S+++D GG+ ++VA ++G   +  +K+ESGVH
Sbjct: 121 EAALFAADLLRMYSRYAESAGLRLEVLDSNESDLGGFAKVVAEVTGEFAYRTLKWESGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GR+HTS  TVAVLP+  + +V + L ++RID  R+ G+GGQ VNTTDSA
Sbjct: 181 RVQRVPATESQGRIHTSTVTVAVLPQVEQSEVQLDLSEVRIDVFRSQGAGGQSVNTTDSA 240

Query: 244 VRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           VR T+        ++V    +SQ +NR +A+ +L +RL + ER++        R  QIGS
Sbjct: 241 VRATYRAGTPDEIMVVCQDGRSQIKNREKALMILASRLAEREREKQQASEREARSSQIGS 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYK--LEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           GDRSE++RTYN+ Q R+TDHR+        LE V+ G +++++  L    + + +   +E
Sbjct: 301 GDRSEKVRTYNYPQNRVTDHRLEGETKNFPLETVIGGRLEELVGALARQQREQQLLDMAE 360


>gi|256372571|ref|YP_003110395.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009155|gb|ACU54722.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 357

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 149/356 (41%), Positives = 212/356 (59%), Gaps = 6/356 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQ 60
           +S  +    ++ +A +   +++        +       +  +  I+  +      + +  
Sbjct: 1   MSEDRYERFEHEYARVLEELADPAIFQDQRRAREVARRHKELEAIVGALRRVQALEGDRD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +    +     R+  + E+  I+  +      +  LLLP D +D ++ ILEIR   
Sbjct: 61  AARELYRGAS--PAEREELKAELDEIDAALARAREALELLLLPSDPNDGRAVILEIRGAE 118

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA LF  DL  MYER+A  R WKVEVLS S +D GGY ++   + G   + R+K E+
Sbjct: 119 GGEEANLFAKDLADMYERWADRRSWKVEVLSRSVSDLGGYDDVTLLVRGDDAWKRLKHEA 178

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G HRVQRVP TE  GRVHTS+ATV  LPEA EI+V I   D+RID  R++G GGQ VNTT
Sbjct: 179 GPHRVQRVPVTETQGRVHTSSATVTALPEADEIEVSIDPSDLRIDVYRSTGPGGQSVNTT 238

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V    EKSQ QNR +A++VLRARL  +E+ +   E +A RK QI S
Sbjct: 239 DSAVRITHLPTGIVVAMQDEKSQIQNRAKALQVLRARLLKLEQDKRQAELTATRKAQIRS 298

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           G RSE+IRTYNF + R+TDHRI LTLY+L+ +LQG +D++ + LL   + + + + 
Sbjct: 299 GGRSEKIRTYNFKENRVTDHRIGLTLYRLDQILQGDLDELSDALLVHEREEQLAAL 354


>gi|326575346|gb|EGE25274.1| peptide chain release factor 2 [Moraxella catarrhalis CO72]
          Length = 349

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 172/346 (49%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   K R  E+ L +      +      K+++E + +  I+  I     K  +   +  
Sbjct: 10  DIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLDDAAAMLE 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + + +S + D+      A+          + +  +     D  +C L+I++G+GG+E
Sbjct: 70  LAVEDDDESLLSDVQAELDDALNSVEE-----LEFRRMFSGEMDANNCYLDIQSGSGGTE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+     +K EVL  S+    G K     + G   F  ++ E GVHR
Sbjct: 125 AQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGVHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +++   HTS A V V PE  +   +DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIGIDINPADLRIDTYRSSGAGGQHVNTTDSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSG 300
           VRITH PTG++V   +E+SQH N+  AMK+LRA+LY++E ++   ++      K  IG G
Sbjct: 245 VRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIGWG 304

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y     RI D R  +       VL G +D  I   L A
Sbjct: 305 ---SQIRSYVLDDSRIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347


>gi|183602493|ref|ZP_02963858.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683536|ref|YP_002469919.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190567|ref|YP_002967961.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195973|ref|YP_002969528.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|254790862|sp|B8DTL4|RF1_BIFA0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183218134|gb|EDT88780.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621186|gb|ACL29343.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248959|gb|ACS45899.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250527|gb|ACS47466.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295793554|gb|ADG33089.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 365

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 140/354 (39%), Positives = 201/354 (56%), Gaps = 20/354 (5%)

Query: 14  NRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             +  IE +M E       D   KL    A +  I++    +   + +      + G+  
Sbjct: 14  EEYENIERQMGEQEVWSNPDKMRKLGRRQAQLGTIVNAYRTWLNIRNDLDAAQEMAGEDP 73

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
                      E   +E E+ E E ++   L+P+D DD +  I+EI+AG GG EAALF G
Sbjct: 74  D-------FAQEAKRLESELPEAEEKLRTALIPRDPDDARDVIMEIKAGAGGEEAALFAG 126

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W V + S +  + GG K++   I          GV++ +K+E GVH
Sbjct: 127 DLLRMYMRYAEKRGWGVTIQSENSTELGGVKDVQMAIRAKGNPSPEEGVWASLKYEGGVH 186

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 187 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 246

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 247 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A + + + S
Sbjct: 307 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEEQRLAS 360


>gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola sp. JR]
 gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
          Length = 371

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 124/368 (33%), Positives = 189/368 (51%), Gaps = 25/368 (6%)

Query: 1   MVFLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISP 44
           M+    + + +L  R  E+                E + +E    D  ++  +    I+ 
Sbjct: 1   MIADLKRDLIELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREIND 60

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           +   I +Y+  K++  D++T+      D +  ++ +     I      +E     LLL  
Sbjct: 61  LKDTIGLYNTLKRQYDDVYTLWELGMEDDDPDEIEKEVARDIRHLRHNVEQAELTLLLGD 120

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
             D   + I+ + AG GG+EA  +V  L RMY R+A  + +K++ L     D+ G K   
Sbjct: 121 KYDK-GNAIISLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSAS 179

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIR 223
            +I G   +  +K E GVHR+ R+   +ASGR HTS A+V VLPE  +    +    D+R
Sbjct: 180 ISIEGPYAYGYLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEVDDETEIVIDPADLR 239

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT R+ G+GGQHVN TDSAVRITHIPTGI+V   +E+SQH NRL+AMK+L+ARL D+E 
Sbjct: 240 IDTFRSGGAGGQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEI 299

Query: 283 KRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDI 339
           K+   E +  R  Q  I  G    +IR+Y F     + DHR  +    ++ V+ G ID+ 
Sbjct: 300 KKKEEELNKLRGEQQEIAWG---SQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEF 356

Query: 340 INPLLTAH 347
           I   L + 
Sbjct: 357 IAAYLKSR 364


>gi|29829454|ref|NP_824088.1| peptide chain release factor 1 [Streptomyces avermitilis MA-4680]
 gi|46576778|sp|Q82J70|RF1_STRAW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29606562|dbj|BAC70623.1| putative peptide chain release factor 1 [Streptomyces avermitilis
           MA-4680]
          Length = 358

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 217/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI++    + Q   + +   
Sbjct: 3   EAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWKQTGDDIETAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + D             EV  +EK+  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  EFVADDPD-------FAAEVKDLEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +RMK+E GVHRVQRVP+TE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG G
Sbjct: 176 ARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEEVDVEIHANDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +AM++LR+RL    ++    E +  
Sbjct: 236 GQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLDAMIQACV 347


>gi|312947424|gb|ADR28251.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 357

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 20  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 79

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 80  VEADDEETFNEAV-----AELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 134

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 135 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 194

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 195 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 254

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 255 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 312

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 313 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 355


>gi|203287654|ref|YP_002222669.1| peptide chain release factor A [Borrelia recurrentis A1]
 gi|201084874|gb|ACH94448.1| peptide chain release factor A [Borrelia recurrentis A1]
          Length = 359

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 242/358 (67%), Gaps = 6/358 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  ++ +   +E ++ +   +       K+ +EY  +  I  K   Y     
Sbjct: 1   MKMFL-EKLNPIEKKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEKIKEKKDEYQHILN 59

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++ + ++  E++DL + E+  +  +  E+EN I  LLL +D +DDK+ I+EIR
Sbjct: 60  QINENQKILSEEDN-LEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAALF  +L+ MY +Y+  +KWK E+++ +  + GG+KE+   I G+ VF ++K
Sbjct: 119 AGTGGEEAALFAHNLYEMYTKYSEKKKWKTELINFNKTELGGFKEVSFEIKGKDVFKKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
            ESGVHRVQR+P TE++G++ TSAATVAVLPE  + D++I  +D+R D  R+SG+GGQHV
Sbjct: 179 HESGVHRVQRIPITESNGKLQTSAATVAVLPEVEDTDIEINDKDLRTDVYRSSGAGGQHV 238

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+    +E+SQH+N+ +AMK+LRARLY++E  +   +RS +RK Q
Sbjct: 239 NTTDSAVRITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQEQRSNDRKQQ 298

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +GSGDRSERIRTYNF Q R+TDHR N++LYKLE ++QG +D ++N L    Q + + +
Sbjct: 299 VGSGDRSERIRTYNFPQNRVTDHRANISLYKLEEIMQGELDSLLNTLALKFQEQSLKN 356


>gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
 gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
          Length = 357

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 133/356 (37%), Positives = 210/356 (58%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  +E ++++    +      K+ + +  + P+I       + + + +    +
Sbjct: 8   VDDILSEYHGLEAQLADPELHNDPKAARKVGKRFNELQPVIQTHKKLTEVQDDLEAAREM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +  +   +    E   +E+++ +L       L P+D  D    ++E+++G GG EA
Sbjct: 68  AYEDSEFAAEAERLAAEAEELEEKLADL-------LAPRDPHDSDDIVMELKSGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-----GRGVFSRMKFES 180
           ALF G+L RMY+RYA    +  E+L  S++D GG K++  +I        G +S  KFE 
Sbjct: 121 ALFAGELARMYQRYAEKHGFTTEILGLSESDLGGVKDMTMSIRAKTPSRDGAWSVFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E  D+ I  +D+R+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDIQIDEKDLRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH+PTG++V    E+SQ QN+ RAM+VL ARL  ++ + +A   S  RK Q+ 
Sbjct: 241 TDSAVRLTHLPTGLVVTCQKERSQIQNKARAMQVLAARLQQMKEEEIAEAASDQRKSQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + R++DHRI    + L+ VL G +DD++  L  A +A+ + +
Sbjct: 301 NMDRSERIRTYNFPENRVSDHRIGYKAHNLDSVLGGDMDDLLKALHDAERAERLEA 356


>gi|302558381|ref|ZP_07310723.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000]
 gi|302475999|gb|EFL39092.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000]
          Length = 358

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 144/352 (40%), Positives = 216/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           +L + YA ++PI++    + Q   + +   
Sbjct: 3   EAVEELVAEHADLEKKLADPSVHSDQANARRLNKRYAELTPIVATYRSWKQTGDDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +EK+  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAADDPD-------FAAEVKDLEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ +++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGQGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVDVEINPNDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +A+++LR+RL    ++    E +  
Sbjct: 236 GQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +  +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGDLAAVIQACV 347


>gi|289643112|ref|ZP_06475242.1| peptide chain release factor 1 [Frankia symbiont of Datisca
           glomerata]
 gi|289507076|gb|EFD28045.1| peptide chain release factor 1 [Frankia symbiont of Datisca
           glomerata]
          Length = 356

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 215/354 (60%), Gaps = 16/354 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L    AE+E R+++            L   YA ++P +      D+   +       
Sbjct: 5   LDALLTEHAELESRLADPSVHADPALARSLGRRYAELTPAVETARELDRVAADLATAREF 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +  S        + EV  +E E   L N +   L+P D DD +  ILEI+AG GG E+
Sbjct: 65  AAEDTS-------FRAEVAELEAEQETLRNRLRAHLVPTDPDDARDAILEIKAGAGGEES 117

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-----GRGVFSRMKFES 180
           ALF GDL RMY RYA  R W+ E+L ++ +D GGY+++   +        GVF R++FE 
Sbjct: 118 ALFAGDLLRMYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKAGRGASEGVFGRLRFEG 177

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE++GR+HTSAA V VLPEAA+++VDI   D+RID  R+SG GGQ VNTT
Sbjct: 178 GVHRVQRVPVTESAGRIHTSAAGVLVLPEAADVEVDIDPNDLRIDVYRSSGPGGQSVNTT 237

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+P+G++V   +EKSQ QN+  A+++LRARL  V R+R   E SA R  Q+ +
Sbjct: 238 DSAVRITHLPSGLVVSCQNEKSQLQNKESALRILRARLLSVARERAQAEASAARASQVRT 297

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
            DRSER+RTYNF++ RI+DHR+    Y L+ VL G +DD++N L+ A     + 
Sbjct: 298 VDRSERVRTYNFAENRISDHRVGYKAYNLDQVLDGELDDVLNALIAADLQTRLS 351


>gi|124024025|ref|YP_001018332.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964311|gb|ABM79067.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9303]
          Length = 367

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 210/353 (59%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   K  F  +E ++++            +  E A + P++         +QE Q+   
Sbjct: 11  RLETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVEQEWQETKQ 70

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D  +  LAQ E+  +E     L   +   LLP D  D +S +LEIRAG GG+E
Sbjct: 71  LLRESRGDEAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEIRAGAGGNE 130

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYERY     W V+ LS+++ D GG++E++ +I G  VFS++KFE+GVHR
Sbjct: 131 ACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQLKFEAGVHR 190

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTS ATVAV+PEA  ++V I   ++ I T R+ G+GGQ+VN  ++AV
Sbjct: 191 VQRVPTTESQGRVHTSTATVAVMPEADAVEVQIDPSELEISTARSGGAGGQNVNKVETAV 250

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + ++SQ QNR RAM++LRA+L + +        S+ R+ Q+G+GDRS
Sbjct: 251 DLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLERQIAEANARESSTRRAQVGTGDRS 310

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R TDHR+      LE VL G ++++I   +   Q   +   S
Sbjct: 311 EKIRTYNYKDNRTTDHRLGRNFS-LEPVLTGQLEELIGACIAEEQRHQLEELS 362


>gi|220934633|ref|YP_002513532.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995943|gb|ACL72545.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 364

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 181/343 (52%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +    +      +L  E + +  ++  IS  D+   + +DL  + 
Sbjct: 27  DAKRERLEEVSRELEDPNVWNNPEKAQELGRERSRLEEVVLLISRMDKALGDTRDLLDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D+E     + ++   E ++ +LE    +  +     D+ +  ++I+AG+GG+EA 
Sbjct: 87  AEE-DDAETVSAVEADLANYENDVAQLE----FRRMFSGEMDENNAYMDIQAGSGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   R +K E++  S+ +  G K       G   +  ++ E+GVHR+ 
Sbjct: 142 DWANMLLRMYLRWGERRGFKTELMEVSEGEVAGIKSATIKFEGPYAYGWLRTETGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A V V PE  +  +++I   D+R+DT RASG+GGQHVN T+SA+R
Sbjct: 202 RKSPFDSGNRRHTSFAAVFVSPEVDDSIEIEINPADLRVDTYRASGAGGQHVNRTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+G++V   +++SQH+NR  AMK L+A+LY++E ++    +    + K  IG G  
Sbjct: 262 ITHMPSGVVVACQADRSQHKNRDTAMKQLKAKLYELELQKQNAAKQALEDTKSDIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y   Q RI D R  + +   + VL G +D  I   L 
Sbjct: 320 -SQIRSYVLDQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361


>gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
           20306]
          Length = 358

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 146/358 (40%), Positives = 213/358 (59%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  IE++M++       + + KL++ YA + PII   +   Q K++  D   +
Sbjct: 8   VDDIVSEYQGIEMQMADPEVASDQNQFRKLSKRYAELRPIIVVHTQLTQAKEDLSDAKEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +   +  +        +E  + ELE ++  LL P+D  D +  I+EI+AG GG EA
Sbjct: 68  AYEDHDFQDEAE-------RLEGVVLELEEQLADLLAPRDEHDSEDIIMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF  DL RMYERYA    +  EV+  +++D GG K++  T   +       +S  KFE 
Sbjct: 121 ALFAADLARMYERYADKSGFSWEVIGINESDLGGVKDMTITFKSKTPSRDGAWSVFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E+ +V I  +D+R+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVHIDEKDLRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH+PTG++V    E+SQ QN+ RAM+VL+ARL  +ER+    E    R  Q+ 
Sbjct: 241 TDSAVRLTHLPTGLVVTCQRERSQIQNKARAMQVLQARLEQMEREAREAEAGEQRASQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSERIRTYN+ + RITDHRI      L+ VL G +  +I+ L    +A+ + S  
Sbjct: 301 TMDRSERIRTYNWPENRITDHRIGYKANNLDSVLDGDMGSLIDALQAQERAERMESEG 358


>gi|294631400|ref|ZP_06709960.1| peptide chain release factor 1 [Streptomyces sp. e14]
 gi|292834733|gb|EFF93082.1| peptide chain release factor 1 [Streptomyces sp. e14]
          Length = 355

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 145/349 (41%), Positives = 217/349 (62%), Gaps = 18/349 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI++    + Q   + +   
Sbjct: 3   EAVEELVAEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWKQTGDDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  ++K+  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAADDPD-------FAAEVKELDKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRM 176
           E+ALF GDL RMY RYA    WK E++ +++++ GGYK++   +        G+GV++R+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKARGQIEPGQGVWARL 175

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG GGQ 
Sbjct: 176 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVDVEINPNDLRIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG++    +EKSQ QN+ +AM++LR+RL    ++    E +  R+ 
Sbjct: 236 VNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           Q+ + DRSE+IRTYN+ + RI+DHR+    Y L+ VL G +  +I   +
Sbjct: 296 QVRTVDRSEKIRTYNYPENRISDHRVGFKAYNLDQVLDGDLAAVIQACV 344


>gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
 gi|167710441|gb|EDS21020.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
 gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2)
           [butyrate-producing bacterium SSC/2]
          Length = 373

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 175/352 (49%), Gaps = 12/352 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +   K R  ++EL M E    D       + +E  ++  ++ +      K ++ + L  +
Sbjct: 27  LEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDM 86

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +      I +   +     +         +    L     D    IL + AG GG+E+
Sbjct: 87  AEEDEDADLIEEATALMDEFEKTYEE-----LRISTLLTGEYDKDDAILTLHAGAGGTES 141

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             + G L+RM+ R+A  + +  EVL   D D+ G K +   I+G   +  ++ E GVHR+
Sbjct: 142 CDWAGMLYRMFTRWAGKKGYGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRL 201

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS A+  V+P+  +  +V+I  EDIRIDT RASG+GGQH+N TDSA+
Sbjct: 202 VRISPFNAAGKRQTSFASCDVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKTDSAI 261

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V   +E+SQH+N+ +AMK+L+ +LY +++++   + S  R   +G     
Sbjct: 262 RITHLPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDIR-GDVGDNGWG 320

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            +IR+Y       + DHR N        VL G +D  +N  L          
Sbjct: 321 NQIRSYVLQPYTMVKDHRTNFESGNPSAVLDGDLDGFMNAYLAWDNNSKKEE 372


>gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 347

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 180/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +    +      KL +E   +  ++  ++  D   ++  +L  + 
Sbjct: 10  ETKQQRLEEVSQLLEDPSIWNDNERSQKLGKERRELEFVVKSLTEVDNSLRDSAELFEMA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N D+ +  +        ++          +  +  +  D  +C ++I++G+GG+EA 
Sbjct: 70  REENDDATLLGIDADSKALEKQVEEM-----EFRRMFANPMDGNNCFIDIQSGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RY   R +KVEVL  S+ D  G K     ISG   +  ++ ESGVHR+ 
Sbjct: 125 DWASMLLRMYLRYCERRGFKVEVLEESEGDVAGLKSASLKISGDYAYGYLRTESGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V+V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 185 RKSPFDSGNRRHTSFASVSVFPEVDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AM +L+A+LY +E  +   E+    + K  IG G  
Sbjct: 245 ITHLPTNTVVQCQNDRSQHRNKAEAMNMLKAQLYQLELNKRNQEKQALEDAKTDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I+  L  
Sbjct: 303 -HQIRSYVLDQSRIKDLRTNVEIGNTQGVLDGDLDPFISESLKQ 345


>gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
           R551-3]
 gi|238693429|sp|B4SHV0|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 374

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 164/344 (47%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +      +       L  E +++   +  I+       +  +L  + 
Sbjct: 28  DAKKERLEEVTRELESPDVWNNAEYAQNLGRERSSLEKTVGGIASVLDGLADATELLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +       ++   +  + +LE +           D+ +  ++I+AG GG+EA 
Sbjct: 88  -ESEQDEDTALAVVADLDKHQAHVEKLEFQRM----FSGEMDNAAAFVDIQAGAGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   R WK E++  S  D  G K     + G   +  +K E+GVHR+ 
Sbjct: 143 DWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAYGWLKTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS  +V V PE  +         D+R D  R+SG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPT I+V   + +SQHQNR  AMK+L A+LY++E ++   E+ A    K  IG G  
Sbjct: 263 ITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDAVEATKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR Y   Q RI D R  +     + VL G +D+ +   L A
Sbjct: 321 -SQIRNYVLDQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola
           LSR1]
 gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola
           LSR1]
          Length = 344

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 180/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +    +      +L +E + +  I+  I   +++  +   L  + 
Sbjct: 7   DVKQERLEEVSAELEQPDVWNKPEYAQQLGKERSTLEAIVLTIQQLERQLADVNGLLDLA 66

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N ++   ++      A  K +     ++ +  +     D  +C L+++AG+GG+EA 
Sbjct: 67  VEENDEATFNEVL-----AELKAVENNLIQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 121

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + ++ E++ SSD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 122 DWANMLLRMYLRWADAKGFQTEIIDSSDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 181

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE  +  +++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 182 RKSPFDSGGRRHTSFSSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVR 241

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+    +++SQH+N+ +AM+ L+A+LY+ E ++   ++    + K  IG G  
Sbjct: 242 ITHIPTNIVTQCQNDRSQHKNKDQAMQQLKAKLYEFEMQKKNADKQLQEDNKSDIGWG-- 299

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+     + VL G +D  I   L A
Sbjct: 300 -SQIRSYVLDDARIKDLRTNVETRNTQAVLDGDLDKFIEASLKA 342


>gi|294790651|ref|ZP_06755809.1| peptide chain release factor 1 [Scardovia inopinata F0304]
 gi|294458548|gb|EFG26901.1| peptide chain release factor 1 [Scardovia inopinata F0304]
          Length = 365

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 140/355 (39%), Positives = 206/355 (58%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           + + +IE +MS+     + D   KL   +A ++ I++    Y +   +         + +
Sbjct: 15  DEYHDIERQMSQPEIASNPDKIRKLGRRHAELAQIVTAYQDYKRLSDDLDAAKEFAAEDD 74

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           S          E   +E+++   E ++   L+P+D DD +  I+EI+AG GG EAALF G
Sbjct: 75  S-------FAAEAQRLEEKLPAAEEKLRTALIPRDPDDARDTIMEIKAGAGGEEAALFAG 127

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W  E++S +  + GG K+I              GV++ +K+E GVH
Sbjct: 128 DLLRMYTRYAEKRGWATEIMSQNMTELGGVKDIQIAFRNKGAVAPEDGVWASLKYEGGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 188 RVQRIPVTESQGRIQTSAAGVIVFPEADDDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 247

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ +  A E +  R  Q+ S 
Sbjct: 248 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEEEAQEAADMRHSQVRSL 307

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +   + SA
Sbjct: 308 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEEARLASA 362


>gi|117921735|ref|YP_870927.1| peptide chain release factor 2 [Shewanella sp. ANA-3]
 gi|117614067|gb|ABK49521.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           ANA-3]
          Length = 352

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 165/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 15  DAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLEDVEGLLELA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +  +       +        + +  +     D   C L+I++G+GG+EA 
Sbjct: 75  IEEEDEDTFNETTKELDYLESRLAE-----LEFRRMFSGQHDASDCYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 190 RKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESAVR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+L+++E  +   E+  + + K  IG G  
Sbjct: 250 ITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R ++     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|171920548|ref|ZP_02695589.3| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185178800|ref|ZP_02554523.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024350|ref|ZP_02570606.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518435|ref|ZP_02556548.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524208|ref|ZP_02557610.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867475|ref|ZP_03079479.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273256|ref|ZP_03205792.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225550782|ref|ZP_03771731.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225551438|ref|ZP_03772384.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903245|gb|EDT49534.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209423|gb|EDU06466.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018616|gb|EDU56656.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188998234|gb|EDU67331.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195660120|gb|EDX53500.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660951|gb|EDX54204.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249776|gb|EDY74556.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225379253|gb|EEH01618.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|225379936|gb|EEH02298.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 359

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 156/363 (42%), Positives = 225/363 (61%), Gaps = 14/363 (3%)

Query: 3   FLSHKQICDLKNRFA--------EIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQ 54
              +K++ +   R A        E+E   S+        ++  +    + I    + Y Q
Sbjct: 1   MEYNKKLYEAIERVAVKNKTLKQELETITSD---FKKIKEINIQLKKTTKIAEAFAKYKQ 57

Query: 55  KKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
           K         ++     D E+ +LAQ+++   +  I  +ENE+  +LLP D +DDK+ I+
Sbjct: 58  KIDAGIVAEELLN-TEKDLELVELAQMDLDDAKASIPVIENELKIMLLPTDPNDDKNVIV 116

Query: 115 EIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFS 174
           E+R   GG E+++FVG+LF  Y  Y     WK++++  + N   G+  I   ISG  V+S
Sbjct: 117 EMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNAV-GFSFISFMISGEEVYS 175

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
           RMKFESGVHRVQRVPATE+ GRVHTS  TVAVLPE  E+DV I   D+RIDT RASG+GG
Sbjct: 176 RMKFESGVHRVQRVPATESKGRVHTSTITVAVLPEQDEVDVVINPSDLRIDTYRASGAGG 235

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVN T+SAVRITHIPTG++      KSQ +NR  AMK+LRA+L++  +++   E +  R
Sbjct: 236 QHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEFANLR 295

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           K Q+G+GDRSE+IRTYN+ Q R+TDHRI+LTL KL+ ++ G +D+II+ L+   Q  ++ 
Sbjct: 296 KNQVGTGDRSEKIRTYNYPQNRVTDHRISLTLNKLDQIMMGELDEIIDALIADEQTNLMA 355

Query: 354 SAS 356
           +  
Sbjct: 356 NLG 358


>gi|323342350|ref|ZP_08082582.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463462|gb|EFY08656.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 359

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 141/360 (39%), Positives = 216/360 (60%), Gaps = 6/360 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  ++ R  EI   M  S  +       KL +E +++  ++     + + + 
Sbjct: 2   MEKTMRDRLEKIQARDEEITEMMMSSEVLSDRKMMAKLGKEQSSMQQVLHAYRQFLEAED 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  ++     + E+++LA +E     +++ ++  E+  LL+PKD  D    I+EIR
Sbjct: 62  FFTQAQEMLA--VDEPELQELAAMESAEYSEKMVKIIEELEVLLVPKDPSDSFDAIVEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG E  +F GDL+RMY RYA    +K E++ + D + GGY  I   + G   F   K
Sbjct: 120 GAAGGDEGNIFAGDLYRMYTRYAESLGYKYELIEAMDAEAGGYSLISFVVKGAEPFRHFK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESG HRVQRVP TE  GR+HTS ATV VL +  + ++DI   D+ IDTMR+SG+GGQHV
Sbjct: 180 FESGAHRVQRVPKTETQGRIHTSTATVLVLADVEDEEIDIDPNDLEIDTMRSSGAGGQHV 239

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVRI H PTGI V     +SQH N+ +AM+++RAR+Y+  ++R+  ER   R+ +
Sbjct: 240 NKTDSAVRIVHKPTGIAVKCQDGRSQHDNKDKAMRLVRARVYEEHQRRIQEERHGERQSK 299

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +G+G RSE+IRTYN+ Q R++DHRI LTL KL+ +++G +D+I+N LL   Q +++   +
Sbjct: 300 VGTGARSEKIRTYNYPQNRVSDHRIGLTLQKLDIIMEGKLDEIVNALLEQEQKEILEQGA 359


>gi|190149600|ref|YP_001968125.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307245141|ref|ZP_07527233.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249543|ref|ZP_07531530.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255961|ref|ZP_07537758.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258552|ref|ZP_07540288.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260795|ref|ZP_07542482.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307262921|ref|ZP_07544544.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189914731|gb|ACE60983.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306853921|gb|EFM86134.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306858398|gb|EFM90467.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861075|gb|EFM93072.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867346|gb|EFM99198.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869521|gb|EFN01311.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871739|gb|EFN03460.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 347

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L +E +A+  +++ I   DQ  ++ + L  + 
Sbjct: 10  DAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDVEGLIELA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ E   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 70  VEAEDEDTFNEAQ-----AEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I+G   F  ++ E+G+HR+ 
Sbjct: 125 DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS A   V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 185 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIP+GI+V   + +SQHQN+ + MK L+A+LY++E  +   E+      K  IG G  
Sbjct: 245 ITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 303 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345


>gi|296112892|ref|YP_003626830.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
 gi|295920586|gb|ADG60937.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
 gi|326564445|gb|EGE14672.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1]
 gi|326566640|gb|EGE16781.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1]
 gi|326567583|gb|EGE17698.1| peptide chain release factor 2 [Moraxella catarrhalis BC1]
 gi|326569431|gb|EGE19491.1| peptide chain release factor 2 [Moraxella catarrhalis BC8]
 gi|326571371|gb|EGE21386.1| peptide chain release factor 2 [Moraxella catarrhalis BC7]
 gi|326576569|gb|EGE26476.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1]
 gi|326577414|gb|EGE27298.1| peptide chain release factor 2 [Moraxella catarrhalis O35E]
          Length = 349

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 169/346 (48%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   K R  E+ L +      +      K+++E + +  I+  I     K  +   +  
Sbjct: 10  DIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLDDAAAMLE 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + + +S + D+      A+          + +  +     D  +C L+I++G+GG+E
Sbjct: 70  LAVEDDDESLLSDVQAELDDALNSVEE-----LEFRRMFSGEMDANNCYLDIQSGSGGTE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+     +K EVL  S+    G K     + G   F  ++ E GVHR
Sbjct: 125 AQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGVHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSA 243
           + R    +++   HTS A V V PE  +         D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRIDTYRSSGAGGQHVNTTDSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSG 300
           VRITH PTG++V   +E+SQH N+  AMK+LRA+LY++E ++   ++      K  IG G
Sbjct: 245 VRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIGWG 304

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y     RI D R  +       VL G +D  I   L A
Sbjct: 305 ---SQIRSYVLDDSRIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347


>gi|148272337|ref|YP_001221898.1| peptide chain release factor 1 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166223547|sp|A5CQ48|RF1_CLAM3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147830267|emb|CAN01201.1| peptide chain release factor RF-1 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 359

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 144/361 (39%), Positives = 208/361 (57%), Gaps = 18/361 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  L     E++ ++ +           K+   YA +S I++  + + Q   +     
Sbjct: 3   ESVVQLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRIVAAHAEWTQLGDDLAAAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D    D       A++    +L      LL+P+D DD +  I+EI+ G GG+
Sbjct: 63  ELAEE---DPAFADEIPGLEQALDAAQEKL----RRLLIPRDPDDARDVIMEIKMGEGGA 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------VFSRMK 177
           E+ALF  DL RMY  YA  R+WK EVLS + +D GGYK++   I G        V++ +K
Sbjct: 116 ESALFAADLLRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIKGTSDDPALGVWAHLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           +E GVHRVQRVPATE+ GR+HTSAA V V+PE  E++   I   D++ID  R+SG GGQ 
Sbjct: 176 YEGGVHRVQRVPATESQGRIHTSAAGVLVIPEVEEVEEVAIDPNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR   M+VLRAR+   +++ +  E SA R+ 
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARVLAKQQEEIDAEASAVRRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + DRSERIRTYNF + RI DHR     Y L+ V+ G +D ++   + A +   + + 
Sbjct: 296 QIRTMDRSERIRTYNFPENRIADHRTGYKAYNLDAVMDGALDPVVESCIQADEEARLDAL 355

Query: 356 S 356
            
Sbjct: 356 G 356


>gi|255559292|ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis]
 gi|223540051|gb|EEF41628.1| peptide chain release factor, putative [Ricinus communis]
          Length = 370

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 132/354 (37%), Positives = 225/354 (63%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +++++   V     Y KL +  A +  ++S    +   +++ ++   
Sbjct: 11  KLESAEKTWKELSVKLADPDVVSNPTEYQKLAQSVAELDQVVSVYRRFKDCEKQLEETKA 70

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +  +D ++ ++  +E+ ++  E++ LE ++  LLLP D  D ++ +LE+RAGTGG E
Sbjct: 71  LAKEEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLLLPSDPLDARNIMLEVRAGTGGDE 130

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYE+Y     WK  ++S S+ + GGYK  V  + G  V+S++K+ESGVHR
Sbjct: 131 AGLWAGDLVRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYSKLKYESGVHR 190

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTS ATVA++PEA E++V I  +DI + T R+ G+GGQ+VN  ++AV
Sbjct: 191 VQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 250

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E++Q QN+ RA+++LRA+LY+++ +         RKLQ+G+G R+
Sbjct: 251 DLFHKPTGIRIFCTEERTQLQNKTRALQLLRAKLYEMKVREQQESIRNQRKLQVGTGARA 310

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R+TDHR+ +  ++L   LQG I++ +    +  Q +++   +E
Sbjct: 311 EKIRTYNYKDNRVTDHRLKMN-FELTSFLQGDIENAVQACASTEQKELLEELAE 363


>gi|313606725|gb|EFR83443.1| peptide chain release factor 1 [Listeria monocytogenes FSL F2-208]
          Length = 309

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 156/308 (50%), Positives = 220/308 (71%), Gaps = 2/308 (0%)

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
            Y    ++  +   ++G+   D E+R++A+ E   ++KE  +LE  +  LL+PKD +DDK
Sbjct: 1   EYKNVNEQINETKELLGEKLDD-EMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDK 59

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
           + ILEIR   GG EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G 
Sbjct: 60  NVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGN 119

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             FSRMK+E+G HRVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++
Sbjct: 120 DAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFAST 179

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQ VNTT SAVR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E 
Sbjct: 180 GAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEY 239

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            ANRK  +G+GDRSERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q 
Sbjct: 240 DANRKSAVGTGDRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQT 299

Query: 350 KMIGSASE 357
             +   ++
Sbjct: 300 SKLEHLND 307


>gi|115462961|ref|NP_001055080.1| Os05g0277300 [Oryza sativa Japonica Group]
 gi|113578631|dbj|BAF16994.1| Os05g0277300 [Oryza sativa Japonica Group]
          Length = 349

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 164/348 (47%), Positives = 241/348 (69%), Gaps = 3/348 (0%)

Query: 12  LKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           ++ R A ++ ++++   S + Y +  +E   +   +  I     K++E + L +++ +  
Sbjct: 1   IEQRSAYLQEQINQPDASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTNSV 60

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            + + R++A  E+L   +E ++L++++   LLPKD  D++ CILE+RAGTGG EA+LF  
Sbjct: 61  EEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAM 120

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           D+F+MYE+Y+    WK + +   ++   GYKE   TISG G + ++KFESG+HRVQRVP 
Sbjct: 121 DIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPV 180

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TE SGRVHTSA +VA+LP+A E+DV +  ED+RIDT R+ GSGGQ VNTTDSAVRITH+P
Sbjct: 181 TEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVP 240

Query: 251 TGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TG +V    E+SQHQN+ +A+KVLRARLY++ER R+  +RS  R  QIGSGDRSERIRTY
Sbjct: 241 TGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSERIRTY 300

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           NF QGR+TDHR+ +T + +E V++G  +D  I+ LL  ++   I S +
Sbjct: 301 NFPQGRVTDHRVGITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFA 348


>gi|291613970|ref|YP_003524127.1| hypothetical protein Slit_1503 [Sideroxydans lithotrophicus ES-1]
 gi|291584082|gb|ADE11740.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
          Length = 367

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R AE+     +    +      +L  E  ++  ++  +    Q   +  +L  + 
Sbjct: 30  DSKQERLAEVNQLAEDPAIWNDAKRAQELGRERKSLEDVVLGLIRISQNLDDAAELFEMA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N D  +  +A     A  ++I      + +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  QAENDDDSLNSIA-----ADVQDIETRVAALEFRRMFSNPADPNNCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +Y   + +KVEVL  +D D  G +     + G   +  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYCERKGFKVEVLEQTDGDVAGIRSASLKVEGEYAYGHLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE  +  +VDI   D+RIDT RASG+GGQH+N TDSA+R
Sbjct: 205 RKSPFDSSGGRHTSFASLFVSPEVDDSIEVDINPADLRIDTFRASGAGGQHINKTDSAIR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH PTGI+V   +++SQH+N+  AM +L++RLY++E ++  +E       K  +G G  
Sbjct: 265 ITHQPTGIVVQCQNDRSQHRNKAEAMSMLKSRLYELELRKRQSEADKLEASKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIEASLKQ 365


>gi|209554361|ref|YP_002284416.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|238054476|sp|B5ZAH6|RF1_UREU1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209541862|gb|ACI60091.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
          Length = 359

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 157/363 (43%), Positives = 226/363 (62%), Gaps = 14/363 (3%)

Query: 3   FLSHKQICDLKNRFA--------EIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQ 54
              +K++ +   R A        E+E   S+        ++  +    + I    + Y Q
Sbjct: 1   MEYNKKLYEAIERVAVKNKTLKQELETITSD---FKKIKEINIQLKKTTKIAEAFAKYKQ 57

Query: 55  KKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
           K         ++     D E+ +LAQ+++   +  I  +ENE+  +LLP D +DDK+ I+
Sbjct: 58  KIDAGIVAEELLN-TEKDLELVELAQMDLDDAKASIPVIENELKIMLLPTDPNDDKNVIV 116

Query: 115 EIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFS 174
           E+R   GG E+++FVG+LF  Y  Y     WK++++  + N   G+  I   ISG  V+S
Sbjct: 117 EMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNAV-GFSFISFMISGEEVYS 175

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
           RMKFESGVHRVQRVPATE+ GRVHTS  TVAVLPE  E+DV I   D+RIDT RASG+GG
Sbjct: 176 RMKFESGVHRVQRVPATESKGRVHTSTITVAVLPEQDEVDVVINPSDLRIDTYRASGAGG 235

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVN T+SAVRITHIPTG++      KSQ +NR  AMK+LRA+L++  +++   E +  R
Sbjct: 236 QHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEFANLR 295

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           K Q+G+GDRSE+IRTYN+ Q R+TDHRI+LTL KL+ ++ G +D+II+ L+T  Q  ++ 
Sbjct: 296 KNQVGTGDRSEKIRTYNYPQNRVTDHRISLTLNKLDQIMMGELDEIIDALITDEQTNLMA 355

Query: 354 SAS 356
           +  
Sbjct: 356 NLG 358


>gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
           25259]
          Length = 349

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+          +      +L  E  ++  ++  +       ++  +L  +  +
Sbjct: 14  KKDRLEEVVRLSEAPDFWNDAARAQELGRERKSLEDVVLVLDRVTSGLKDAGELFEMARE 73

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N D          V A    + +    + +  +  +  D  +C L+I+AG GG+EA  +
Sbjct: 74  ENDDD-----TLAAVQADIDGLEKDVATLEFRRMFSNPADPSNCFLDIQAGAGGTEACDW 128

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L R Y +YA  + +K E+L  S+ D  G K     I G   +  ++ E+GVHR+ R 
Sbjct: 129 ASMLLRQYLKYAERKGFKAELLEESEGDVAGIKSASIKIEGDYAYGYLRTETGVHRLVRK 188

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SG  HTS A+V V PE  +  +V+I   D+R+DT RASG+GGQH+N TDSAVRIT
Sbjct: 189 SPFDSSGGRHTSFASVFVYPEVDDSIEVEINPADLRVDTYRASGAGGQHINKTDSAVRIT 248

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           HIP+GI+V   +++SQH+NR  AM +L+++LY+ E ++   E+      K  +G G    
Sbjct: 249 HIPSGIVVQCQNDRSQHKNRAEAMSMLKSKLYEAELRKRQAEQDKLEAGKADVGWG---H 305

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 306 QIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 347


>gi|283455530|ref|YP_003360094.1| peptide chain release factor 1 [Bifidobacterium dentium Bd1]
 gi|283102164|gb|ADB09270.1| prfA Bacterial Peptide Chain Release Factor 1 (RF-1)
           [Bifidobacterium dentium Bd1]
          Length = 340

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 142/346 (41%), Positives = 203/346 (58%), Gaps = 20/346 (5%)

Query: 23  MSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+E       D   KL   +A +  I+S  + Y Q K + +    +  +    +E     
Sbjct: 1   MAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASEDPDFAEEAK-- 58

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 +E E+ E+E ++   L+P+D DD +  I+EI+AGTGG EAALF GDL RMY RY
Sbjct: 59  -----RLENELPEIEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRMYMRY 113

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVHRVQRVPATE 192
           A  R W V + S +  + GG K++   I          GV++ +K+E GVHRVQR+P TE
Sbjct: 114 AEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRIPVTE 173

Query: 193 ASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           + GR+ TSAA V V PE    + ++DI  +D++ID   +SG GGQ VNTT SAVR+THIP
Sbjct: 174 SQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIP 233

Query: 251 TGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI+V+   EKSQ QNR  A++VL++RL  ++ +  A + +  R  Q+ S DRSERIRTY
Sbjct: 234 TGIVVSMQDEKSQIQNRASALRVLKSRLLAMKHEEEAAQAADMRHSQVRSLDRSERIRTY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           NF + RI DHR N   Y L+ VL G +  +I+  + A +A  + + 
Sbjct: 294 NFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLANQ 339


>gi|304396712|ref|ZP_07378592.1| peptide chain release factor 2 [Pantoea sp. aB]
 gi|304355508|gb|EFM19875.1| peptide chain release factor 2 [Pantoea sp. aB]
          Length = 351

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  +    Q  ++ Q L  + 
Sbjct: 14  DAKKERLEEVNAELEQPYVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDVQGLLELA 73

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A    +     E+ +  +     D   C ++++AG+GG+EA 
Sbjct: 74  VEAEDEETFDEAV-----AELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  S+ +  G K +   +SG   F  ++ E+GVHR+ 
Sbjct: 129 DWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  + PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 189 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTG +    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 249 ITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG-- 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 307 -SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349


>gi|71894205|ref|YP_278313.1| peptide chain release factor 1 [Mycoplasma synoviae 53]
 gi|119361563|sp|Q4A6L9|RF1_MYCS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71850993|gb|AAZ43602.1| peptide chain release factor 1 [Mycoplasma synoviae 53]
          Length = 359

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 146/353 (41%), Positives = 219/353 (62%), Gaps = 8/353 (2%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + ++K ++ +++ +++       +  Y KL++E  +IS I+     +   ++  +    +
Sbjct: 9   LLNIKEKYQDLKSQLNLPEIIADIKKYTKLSKEINSISEIVETFDEFLNLEENIKSSKEL 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + D  +D+E+  LA+ E+   + +  ELE ++  LLLPKD +D+K  I+EIR   GG EA
Sbjct: 69  L-DIETDAEVIMLAKEEISQAQSKQLELEEKLKVLLLPKDKNDNKDVIVEIRGAAGGDEA 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +F GDL+RMY ++      K+  L  S    GG+  +  +I G   +S++KFESGVHRV
Sbjct: 128 NIFAGDLYRMYTKWCQQNNMKLSTLDLSPAVSGGFTLVTFSIQGEKAYSKLKFESGVHRV 187

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED-IRIDTMRASGSGGQHVNTTDSAV 244
           QR+P TE  GRVHTS ATV V+PE  +       ++ +RID  R+SG+GGQ VNTTDSAV
Sbjct: 188 QRIPVTETKGRVHTSTATVTVMPEIDDDIEIEIKKEDLRIDVFRSSGNGGQSVNTTDSAV 247

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH PTGI+V     KSQ QN+  AM++L+++LYD+E ++  +E S  RKL  GSG RS
Sbjct: 248 RITHFPTGIVVSCQEGKSQIQNKDIAMRILKSKLYDLELQKKQSEESGYRKLA-GSGARS 306

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+ Q R+TDHRI  +   L YV++G ++ II  LL   Q + I  A 
Sbjct: 307 EKIRTYNYPQDRVTDHRIGYSTS-LNYVMEGRLNPIIEELLLEEQKEKIAQAG 358


>gi|303252568|ref|ZP_07338731.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247319|ref|ZP_07529367.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302648536|gb|EFL78729.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856163|gb|EFM88318.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 347

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L +E +A+  +++ I   DQ  ++ + L  + 
Sbjct: 10  DAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDVEGLIELA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ E   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 70  VEAEDEDTFNEAQ-----AEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I+G   F  ++ E+G+HR+ 
Sbjct: 125 DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS A   V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 185 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIP+ I+V   + +SQHQN+ + MK L+A+LY++E  +   E+      K  IG G  
Sbjct: 245 ITHIPSDIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 303 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345


>gi|33864028|ref|NP_895588.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9313]
 gi|81576937|sp|Q7V518|RF1_PROMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33635612|emb|CAE21936.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9313]
          Length = 365

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 141/353 (39%), Positives = 211/353 (59%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   K  F  +E ++++            +  E A + P++         +QE Q+   
Sbjct: 9   RLETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVEQEWQETKQ 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D  +  LAQ E+  +E     L   +   LLP D  D +S +LEIRAG GG+E
Sbjct: 69  LLRESRGDDAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEIRAGAGGNE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMYERY     W V+ LS+++ D GG++E++ +I G  VFS++KFE+GVHR
Sbjct: 129 ACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V I   ++ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADAVEVQIDPSELEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + ++SQ QNR RAM++LRA+L + +        S+ R+ Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLERQIAEANARESSTRRAQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R TDHR+      LE VL G ++++I   +   Q   +   S
Sbjct: 309 EKIRTYNYKDNRTTDHRLGRNFS-LEPVLTGQLEELIGACIAEEQRHQLEELS 360


>gi|309973325|gb|ADO96526.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
           R2846]
          Length = 365

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 173/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L +E  ++  +++ I   +Q  ++   L  + 
Sbjct: 28  DAKVERLEEVNAELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ +   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 88  IEAEDEDTFNEAV-----AELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ 
Sbjct: 143 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS +   V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G  
Sbjct: 263 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|319427481|gb|ADV55555.1| peptide chain release factor 2, PrfB [Shewanella putrefaciens 200]
          Length = 365

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 166/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 28  DAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +  +       +        + +  +     D  +C L+I++G+GG+EA 
Sbjct: 88  VEEEDEDTFNETTKELDYLESRLAD-----LEFRRMFSGPQDASNCYLDIQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 143 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+L+++E  +   E+  + + K  IG G  
Sbjct: 263 ITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R ++     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 362


>gi|16761822|ref|NP_457439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143309|ref|NP_806651.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56414987|ref|YP_152062.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363916|ref|YP_002143553.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|61230204|sp|P0A289|RF2_SALTY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|61230205|sp|P0A290|RF2_SALTI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76363351|sp|Q5PJG1|RF2_SALPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|238690721|sp|B5BFK6|RF2_SALPK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|25299688|pir||AG0871 peptide chain release factor 2 (RF-2) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154276|gb|AAA72914.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16504124|emb|CAD02871.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138943|gb|AAO70511.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129244|gb|AAV78750.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095393|emb|CAR60952.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 365

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  +    Q   +   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K EV+  S+ +  G K     ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ A    K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|284046083|ref|YP_003396423.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684]
 gi|283950304|gb|ADB53048.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684]
          Length = 349

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 154/359 (42%), Positives = 217/359 (60%), Gaps = 15/359 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            +    +  +++RF E+E +MS+   +     Y +   +Y  +       + + +   +E
Sbjct: 1   MIEQL-VRQVESRFQELEAQMSDPEVIGDRQRYAETGRQYRDLEEAARLAAEWRRAVDDE 59

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                ++ +   D+E+RD     +    + I  L+ EI   ++ KD  D+K+ I+EIR G
Sbjct: 60  AGARELLEEGGDDAEVRD----MLARARERIDALDEEIRLAMVEKDPADEKNVIVEIRPG 115

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA LF GDL+RM  RYA  R +K E LS SD       +    + G G +S  KFE
Sbjct: 116 AGGDEAGLFAGDLYRMLTRYAERRGFKTEALSESD------GQYTFAVKGEGAYSVFKFE 169

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
            G HRVQRVP TE+ GR+HTS ATVAVLPEA E+DV++   D+++D  R+SG GGQ VNT
Sbjct: 170 GGTHRVQRVPETESQGRIHTSTATVAVLPEAEEVDVEVNDNDLQVDVYRSSGPGGQSVNT 229

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH P+GI+V+   EKSQ QNR +AM+VLRARLY+        E SA R  Q+G
Sbjct: 230 TDSAVRITHKPSGIVVSMQDEKSQLQNRDKAMRVLRARLYEAALAEQQAELSATRLAQVG 289

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           SG+R+E+IRTYNF QGRITDHRI LT++ L+  L G +DD+ + L    + + +   +E
Sbjct: 290 SGERAEKIRTYNFPQGRITDHRIKLTVHNLDAALAGELDDVTDALQDDEKRRRLEVQAE 348


>gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 358

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 139/356 (39%), Positives = 213/356 (59%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+   +  +E +M++    +      K  + Y+ + PI++  +  +Q + +  D   +
Sbjct: 8   VDDILAEYQGLEAQMADPEFANDPDNVRKAGKRYSQLQPIVNLNTQLEQARADLADAKEL 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + ++ +   +        +E ++ ELE ++  +L P+D  D    ++EI+AG GG EA
Sbjct: 68  AYEDSAFTAEVE-------RLEPKVVELEEKLADMLAPRDPHDPDDMVMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF G+L RMY+RYA    +  EVL  S++D GG K++  +I  +       +S  KFE 
Sbjct: 121 ALFAGELVRMYQRYAEKHGFITEVLDESESDLGGVKDMTLSIRSKNPSQDGAWSVFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQR+P TE++GR+ TSAA V V PE  E+  V+I  +DIR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRIPVTESNGRIQTSAAGVLVYPEPDEVGQVEIDEKDIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH+PTGI+V    E+SQ QN+ RAM+VL+ARL  +E ++   E +  R  Q+ 
Sbjct: 241 TDSAVRLTHLPTGIIVTCQKERSQIQNKARAMQVLQARLQQIEEEKAEAEAAEGRHAQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYN+ + RITDHRI      L+ VL G +D ++  L  A +   + +
Sbjct: 301 TMDRSERIRTYNWPENRITDHRIGYKANNLDSVLDGDMDALLMALQDADRQARLEA 356


>gi|88855314|ref|ZP_01129978.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1]
 gi|88815221|gb|EAR25079.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1]
          Length = 359

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 136/361 (37%), Positives = 204/361 (56%), Gaps = 18/361 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  L     E+E ++++           K+   YA +S I++  + + Q   +     
Sbjct: 3   ESVQSLLTEHGELEGQLADPELHSDPVRSKKVNRRYAELSRIVAAYNNWRQLTDDLAAAT 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +  S          E+  + + +   + ++  +L+P+D +D +  I+EI+ G GG+
Sbjct: 63  EMADEDES-------FAAEIPGLTETLDTAQEKLRRILIPRDPNDSRDVIMEIKMGEGGA 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           E+ALF GDL RMY  YA  +KWK E++  + +D GG K++   +         GV++ +K
Sbjct: 116 ESALFAGDLLRMYLHYAESKKWKTEIIEQTSSDLGGIKDVQLAVKGNSSDPAEGVWAHLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           +E GVHRVQRVPATE+ GR+HTSAA V V PE  E +   I   D++ID  R+SG GGQ 
Sbjct: 176 YEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEISQNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR   M+VLRAR+    ++    E S  RK 
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILARYQEEADAEASEYRKS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + DRSERIRTYNF + RI DHR     Y L+  + G ++ +I   + A +   + + 
Sbjct: 296 QIRTMDRSERIRTYNFPENRIADHRTGYKAYNLDQAINGALEPVIQSCIMADEEARLAAV 355

Query: 356 S 356
            
Sbjct: 356 G 356


>gi|126173117|ref|YP_001049266.1| peptide chain release factor 2 [Shewanella baltica OS155]
 gi|153002001|ref|YP_001367682.1| peptide chain release factor 2 [Shewanella baltica OS185]
 gi|304410531|ref|ZP_07392149.1| peptide chain release factor 2 [Shewanella baltica OS183]
 gi|307304624|ref|ZP_07584374.1| peptide chain release factor 2 [Shewanella baltica BA175]
 gi|125996322|gb|ABN60397.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           baltica OS155]
 gi|151366619|gb|ABS09619.1| peptide chain release factor 2 [Shewanella baltica OS185]
 gi|304351015|gb|EFM15415.1| peptide chain release factor 2 [Shewanella baltica OS183]
 gi|306912026|gb|EFN42450.1| peptide chain release factor 2 [Shewanella baltica BA175]
          Length = 352

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 166/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +  S   +       L +E A++  ++  I   D   ++ + L  + 
Sbjct: 15  DAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    + ++       +        + +  +     D  +C L+I++G+GG+EA 
Sbjct: 75  IEEEDEDTFNETSKELDYLESRLAD-----LEFRRMFSGPQDASNCYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +  E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SGR HTS  +V V PE  +         D+RIDT RASG+GGQHVN T+SA+R
Sbjct: 190 RKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESAIR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+N+  AMK L+A+L+++E   +    + + + K  IG G  
Sbjct: 250 ITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDARIKDLRTGVENRSTQAVLDGDLDKFIEASLK 349


>gi|48926665|gb|AAT47454.1| putative peptide chain release factor [Oryza sativa Japonica Group]
          Length = 350

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 164/348 (47%), Positives = 241/348 (69%), Gaps = 3/348 (0%)

Query: 12  LKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           ++ R A ++ ++++   S + Y +  +E   +   +  I     K++E + L +++ +  
Sbjct: 2   IEQRSAYLQEQINQPDASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTNSV 61

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            + + R++A  E+L   +E ++L++++   LLPKD  D++ CILE+RAGTGG EA+LF  
Sbjct: 62  EEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAM 121

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           D+F+MYE+Y+    WK + +   ++   GYKE   TISG G + ++KFESG+HRVQRVP 
Sbjct: 122 DIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPV 181

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TE SGRVHTSA +VA+LP+A E+DV +  ED+RIDT R+ GSGGQ VNTTDSAVRITH+P
Sbjct: 182 TEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVP 241

Query: 251 TGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TG +V    E+SQHQN+ +A+KVLRARLY++ER R+  +RS  R  QIGSGDRSERIRTY
Sbjct: 242 TGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSERIRTY 301

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           NF QGR+TDHR+ +T + +E V++G  +D  I+ LL  ++   I S +
Sbjct: 302 NFPQGRVTDHRVGITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFA 349


>gi|217970376|ref|YP_002355610.1| peptide chain release factor 2 [Thauera sp. MZ1T]
 gi|217507703|gb|ACK54714.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 367

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 186/340 (54%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           ++  E+   + +    +      +L +E   +  ++  +   D + ++ +DL  +  +  
Sbjct: 34  SKLEEVNRALEDPAVWNNAERAQELGKEKRQLEDVVLTLQKIDAQSRDLKDLFELA-EAE 92

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D +  +  + +++ ++  I +LE    +  +  +  D  +C +EI+AG GG+EA  + G
Sbjct: 93  DDDDTFEAVEADLVELQGAIEKLE----FRRMFSNPMDPNNCFIEIQAGAGGTEAQDWAG 148

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY RY   + + VE++  ++ +  G K      SG   +  ++ E+G+HR+ R   
Sbjct: 149 MLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFSGEYAYGYLRTETGIHRLVRKSP 208

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS  +V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRITH 
Sbjct: 209 FDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHE 268

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI+V   +++SQH+N+  AM +L+ARLY+ E ++  +E+    + K  IG G    +I
Sbjct: 269 PTGIVVQCQNDRSQHKNKAEAMSMLKARLYEAELRKRQSEQQKLEDSKSDIGWG---HQI 325

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y   Q RI D R N  +   + VL G +DD I   L  
Sbjct: 326 RSYVLDQSRIKDLRTNYEVGNTQAVLDGDLDDFIGASLKQ 365


>gi|290957365|ref|YP_003488547.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22]
 gi|260646891|emb|CBG69988.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22]
          Length = 358

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 149/352 (42%), Positives = 214/352 (60%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E ++++           KL + YA ++PI+     + Q   +     
Sbjct: 3   EAVEELVGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVGTYRTWKQTGDDIDTAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D             EV  +EK+  EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  EFAADDPD-------FIAEVKELEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVDVEINANDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITHIPTG++    +EKSQ QN+ +AM++LR+RL    ++    E +  
Sbjct: 236 GQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNFPENRISDHRVGFKSYNLDQVLDGELDAVIQACV 347


>gi|260581088|ref|ZP_05848909.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
 gi|260092217|gb|EEW76159.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
          Length = 351

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 173/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L +E  ++  +++ I   +Q  ++   L  + 
Sbjct: 14  DAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELA 73

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ +   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 74  IEAEDEDTFNEAV-----AELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ 
Sbjct: 129 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS +   V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 189 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G  
Sbjct: 249 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWG-- 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 307 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|297517277|ref|ZP_06935663.1| peptide chain release factor 1 [Escherichia coli OP50]
          Length = 274

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 152/257 (59%), Positives = 201/257 (78%), Gaps = 2/257 (0%)

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
           PKD DD+++  LE+RAGTGG EAALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKE
Sbjct: 16  PKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKE 75

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLED 221
           I+A ISG GV+ R+KFESG HRVQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D
Sbjct: 76  IIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPAD 135

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +RIDT R+SG+GGQHVNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  
Sbjct: 136 LRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAA 195

Query: 281 ERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
           E  +     ++ R+  +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I
Sbjct: 196 EMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLI 255

Query: 341 NPLLTAHQAKMIGSASE 357
            P++  HQA  + + SE
Sbjct: 256 EPIIQEHQADQLAALSE 272


>gi|184200614|ref|YP_001854821.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
 gi|238689221|sp|B2GLX4|RF1_KOCRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183580844|dbj|BAG29315.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
          Length = 369

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 139/360 (38%), Positives = 207/360 (57%), Gaps = 18/360 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L +  A+++  +++           KL   Y+ ++ I+      ++  ++ +    +
Sbjct: 5   VQPLLDEHAQLQRELADPAVHADAGRARKLGRRYSELNGIVEAHRRVERLSEDLEAAREL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
               + D E+    +     +      L       L+P+D DD ++ ILE++AG GG E+
Sbjct: 65  ---GSMDPELAAEVKPLEEELAVAREAL----RRKLVPRDPDDGRNVILEVKAGEGGDES 117

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMKFE 179
           ALF GDL RMY R+A     K E+LSS+  + GGYK++   +         G ++R K+E
Sbjct: 118 ALFAGDLLRMYMRFAEQSGLKTEILSSTPTELGGYKDVQLAVKGSSSDPSEGAWARFKYE 177

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
            GVHRVQRVP TE+ GRVHTSAA V V PE     ++DI   D++ID  R+SG GGQ VN
Sbjct: 178 GGVHRVQRVPVTESQGRVHTSAAGVLVFPEVDEPDEIDISQNDLKIDVYRSSGPGGQSVN 237

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PTGI+V+  +EKSQ QNR  AM+VLRARL   +++++  E +A RK Q+
Sbjct: 238 TTDSAVRITHVPTGIVVSMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAARKSQV 297

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            + DRSERIRTYNF + RI DHR     Y L++VL G ++ +I   +   +   +    +
Sbjct: 298 RTVDRSERIRTYNFPENRIADHRTGYKAYNLDHVLDGALEPVIASAVELDEKARLEQLGQ 357


>gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40]
 gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus
           degradans 2-40]
          Length = 347

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            + K R AE+EL ++E    D       L  E +++  ++  I   +    + ++L  + 
Sbjct: 10  AEKKERLAEVELELAEPDVWDDPARAQALGSERSSLELVVETIETLENGVADCRELLEMA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    ++      +    +      + +  +     D  +  L+I+AG+GG+EA 
Sbjct: 70  IEESDEDSFLEI-----CSEADRLEAHLATLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   + +K  +  +S  D  G K       G   F  ++ E+GVHR+ 
Sbjct: 125 DWAEMLLRMYLRWGEDKGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS ++V V PE  +  D++I   D+R DT RASG+GGQHVN TDSAVR
Sbjct: 185 RKSPFDSGNRRHTSFSSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDSAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH PTGI+V   SE+SQH NR +A K+LRAR+Y+ E ++   E+    + K  IG G  
Sbjct: 245 LTHAPTGIVVQCQSERSQHSNRDKAWKMLRARVYEQEMQKRNAEKQALEDSKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+       VL G +DD I   L A
Sbjct: 303 -SQIRSYVLDDQRIKDLRTNVQTSNCNAVLDGKLDDFIVASLKA 345


>gi|293363656|ref|ZP_06610406.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2]
 gi|292552763|gb|EFF41523.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2]
          Length = 354

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 149/355 (41%), Positives = 230/355 (64%), Gaps = 9/355 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K +  +K+++ E++  ++    +     Y KL +E  +I  I+   + Y   ++  ++  
Sbjct: 3   KSLLSIKSKYEEMQQNLANPDVISDIKKYTKLNKELNSIEEIVVSFNKYLNAEENLKNAK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   DSE+ +LA+IE+   E+ + +L  E+  L+LPKD +D K+ I+EIR   GG 
Sbjct: 63  EMLAEK--DSELVELAKIEISENEEIMTKLGAELKILILPKDENDSKNVIVEIRGAAGGD 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +F GDLFRMY++++     +++VL  +  + GG+  I  T++G   +S++KFESGVH
Sbjct: 121 EANIFAGDLFRMYQKWSDQNDMRLKVLDETRAEAGGFTLITFTVTGEKPYSKLKFESGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQR+P TE  GRVHTS ATV V+PE  +  ++++  EDIR+D  R+SG+GGQ VNTTDS
Sbjct: 181 RVQRIPVTETKGRVHTSTATVTVMPEIDDDIEIEVKPEDIRVDVFRSSGNGGQSVNTTDS 240

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH  TGI+V     KSQ QN+  AM++L+++LYD+E K+   E S  RKL  G G 
Sbjct: 241 AVRLTHNATGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELKKKQEEESGYRKLA-GLGF 299

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RSE+IRTYN+ Q R+TDHRI+ +   L  V++G ++ II+ LLTA Q + +  A 
Sbjct: 300 RSEKIRTYNYPQDRVTDHRISYSTS-LSPVMEGKVNSIIDSLLTAEQDEKLKEAG 353


>gi|224130870|ref|XP_002320945.1| predicted protein [Populus trichocarpa]
 gi|222861718|gb|EEE99260.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 237/355 (66%), Gaps = 3/355 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             +++  +++R A +E  M++   S   + +  +E   +   +  I+    K++E   L 
Sbjct: 1   MEQRLSAIEHRSACLENFMNQPEASPTEFSRANKELRKLRGSMELITYLRTKQKEIDGLR 60

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           +++ +   D ++ D+A  E+    +E + L+N +   LLP+D  D++ CILE+RAG+GG 
Sbjct: 61  SLMTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRDDADERDCILEVRAGSGGE 120

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF  D+F+MYER++    WK EV+  +++D  GYKE  A ISG  VF ++KFESG+H
Sbjct: 121 EASLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASAAISGADVFGKLKFESGIH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE  GRVHTSA +VA+LP+A E+D+ +  ED+RIDT R+ GSGGQH NTT+SA
Sbjct: 181 RVQRVPVTEKLGRVHTSAVSVAILPQADEVDLQLRNEDLRIDTYRSGGSGGQHANTTNSA 240

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI V+   E+SQH N+ +A+KVL A+LY++ER R+   RS  R  QIGSGDR
Sbjct: 241 VRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRLHMSRSRLRSEQIGSGDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           SERIRTYNF QGR+TDHR+ +T + +  V+QG  +D  I+ LL   +   I S  
Sbjct: 301 SERIRTYNFPQGRVTDHRVGITHHSINDVMQGESLDVFIDALLLQQEMDAIASFG 355


>gi|159904190|ref|YP_001551534.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9211]
 gi|238687119|sp|A9BCL8|RF1_PROM4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|159889366|gb|ABX09580.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9211]
          Length = 365

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 224/354 (63%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   ++ F  +EL++++        +L     E A + P++       + ++E  ++  
Sbjct: 9   RLETARSSFQNLELQLADPDVASDPKRLETIARERARLEPLVLDYEKLLEIEEELLEVKD 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           V+ +  SD ++ +LAQ E+  +E     L N++   LLPKD  D++S +LEIRAG GG E
Sbjct: 69  VLRESKSDKDLEELAQDEMRKLELFKTNLINQLTLALLPKDPRDERSVMLEIRAGAGGDE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMYERY     W V  +SS+D D GG++E++ ++ G  VFS++KFE+GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKIGWSVRPISSTDADLGGFRELIISVKGDSVFSQLKFEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVAV+PEA  ++V +   D+ I T R+ G+GGQ+VN  ++AV
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEADPVEVQLDPGDLEISTARSGGAGGQNVNKVETAV 248

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RAM++LRA+L ++E      +  + R  Q+G+GDRS
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLEMEIAEANAKERSARLAQVGTGDRS 308

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R TDHR+ +  + LE VL+G +D++I   +   Q  MI    E
Sbjct: 309 EKIRTYNYKDNRTTDHRLGIN-FPLENVLEGELDNLIGACIAEEQRLMIEELGE 361


>gi|56459931|ref|YP_155212.1| protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR]
 gi|56178941|gb|AAV81663.1| Protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR]
          Length = 351

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   M +    D       L +E AA+  ++  +    Q   + + L  + 
Sbjct: 14  DAKLERLEEVTREMEQPNVWDDPPKAQALGKERAALEQVVQTLDKLQQGLDDVEGLVDLA 73

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +  + A  E+  + K++  LE    +  +    +D   C L+I++G+GG+EA 
Sbjct: 74  VEAE-DEDTFNEAHEELSGLVKQLEALE----FRRMFSKDNDSADCYLDIQSGSGGTEAQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    +K E+   S+ D  G K     + G   +  ++ E+GVHR+ 
Sbjct: 129 DWANMLLRMYLRWAEAHDFKAEITELSEGDVAGIKSATVRVVGEYAYGWLRTETGVHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V V PE  +         D+R+DT RASG+GGQHVN TDSAVR
Sbjct: 189 RKSPFDSGNRRHTSFASVFVYPEVDDDIDIEIDPSDLRVDTYRASGAGGQHVNRTDSAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH PTGI+V   S++SQH+NR  AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 249 LTHEPTGIVVQCQSDRSQHKNRDSAMKQLKAKLYEFELQKQNEEKQALEDSKADIGWG-- 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 307 -SQIRSYVLDDARIKDLRTGIENRNTQAVLDGALDPFIEASLK 348


>gi|308235424|ref|ZP_07666161.1| peptide chain release factor 1 [Gardnerella vaginalis ATCC 14018]
 gi|311114831|ref|YP_003986052.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019]
 gi|310946325|gb|ADP39029.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019]
          Length = 365

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 207/355 (58%), Gaps = 20/355 (5%)

Query: 14  NRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           N + +IE RM E       DA  KL   +A +  I+S    Y Q  ++ +  + +  +  
Sbjct: 17  NEYRDIENRMGEPEVASNPDAIRKLGRRHAELGSIVSAYLNYKQLCEDYEVANEMASEDE 76

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             ++     + ++ A +        ++   L+P+D DD +  I+EI+AGTGG EAALF G
Sbjct: 77  DLAKEAKQLEEQIPAAK-------EKLRTALIPRDPDDARDMIMEIKAGTGGEEAALFAG 129

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W   + S +  + GG K++   I          GV++ MK+E GVH
Sbjct: 130 DLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVH 189

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + +++I  +D++ID   +SG GGQ VNTT 
Sbjct: 190 RVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTY 249

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S 
Sbjct: 250 SAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSL 309

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +A  +  A
Sbjct: 310 DRSERIRTYNFPENRIVDHRTNYKAYNLDQVLNGDLQPVIDSDIQADEADRLAKA 364


>gi|317049377|ref|YP_004117025.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
 gi|316950994|gb|ADU70469.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
          Length = 365

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  +    Q  ++ Q L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEIIVGTLDQMYQGLEDVQGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +      +A    +     E+ +  +     D   C ++++AG+GG+EA 
Sbjct: 88  VEADDEETFNET-----IAELDGLETKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  S+ +  G K     +SG   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIRVSGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  + PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITHIPTG +    +++SQH+N+ +AMK ++A+LY++E ++   E+  + + K  IG G  
Sbjct: 263 ITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAAEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 363


>gi|254521606|ref|ZP_05133661.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14]
 gi|219719197|gb|EED37722.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14]
          Length = 360

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 164/337 (48%), Positives = 231/337 (68%), Gaps = 10/337 (2%)

Query: 26  SPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
              V     +  L+ E+A + P+ + ++   + K +      +      D ++R+LA  E
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPVAAALADEARAKADLAAAEGMRA----DPDLRELADEE 81

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           + A +  +++LE E+  LL+P+D  D+ +  LE+RAGTGG EAA+F GDLFRMY RYA  
Sbjct: 82  IGAAQTRLQQLEQELALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAER 141

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + WKVE+ S +  + GGYKE+VA + GRG FSR+KFESG HRVQRVPATE+ GR+HTSAA
Sbjct: 142 QGWKVEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAA 201

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           TVA++PE  E+D  +    D+++DT R+SG+GGQHVN T+SA+RITH+PTG++V   +E+
Sbjct: 202 TVAIIPETDEVDDIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTER 261

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR 320
           SQH NR +AMK L+A+L D ER+R    ++ +R+LQ+GSGDRS+RIRTYNF QGRITDHR
Sbjct: 262 SQHANRDKAMKRLKAQLLDAERQRQDAAQAESRRLQVGSGDRSQRIRTYNFPQGRITDHR 321

Query: 321 I-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +  LTLY L  +L G +D ++  L   HQ   +   S
Sbjct: 322 VEGLTLYDLPNILAGDLDPLLQRLSHEHQVDALAQLS 358


>gi|206578228|ref|YP_002236652.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
 gi|288933629|ref|YP_003437688.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
 gi|238054482|sp|B5XUF3|RF2_KLEP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|206567286|gb|ACI09062.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
 gi|288888358|gb|ADC56676.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
          Length = 365

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEAEDEETFNEAV-----AELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   I G   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTG++    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|71065379|ref|YP_264106.1| peptide chain release factor 2 [Psychrobacter arcticus 273-4]
 gi|71038364|gb|AAZ18672.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
           arcticus 273-4]
          Length = 349

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+ L +      +      K+ +E + +  +I  +   +   ++   +  + 
Sbjct: 12  DGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDASAMLELA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +S + D+      A      +   ++ +  +     D  +C L+I++G+GG+EA 
Sbjct: 72  VEEEDESLLADVQ-----AELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    +KV+V+  S     G K     I G   F  ++ E GVHR+ 
Sbjct: 127 DWAEMLLRMYTRWAEAHGFKVDVIEVSAGGVAGIKSATIEIKGDYAFGWLRTEIGVHRLV 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++   HTS A V V PE  +  ++D+   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 187 RKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDVNPADLRIDTYRSSGAGGQHVNTTDSAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH P+G++V   +E+SQH N+  AMK+LRA+LY++E ++    + A    K  +G G  
Sbjct: 247 ITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWG-- 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +  +    VL G +D  I   L A
Sbjct: 305 -SQIRSYVLDDSRIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347


>gi|260582141|ref|ZP_05849935.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
 gi|260094773|gb|EEW78667.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
          Length = 351

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +       D    L +E  ++  +++ I   +Q  ++   L  + 
Sbjct: 14  DAKVERLEEVNAELEQPDVWNAPDKAQTLGKERVSLEQVVNTIKNLEQGLEDVDGLLELA 73

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ +   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 74  IEAEDEDTFHEAV-----AELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ 
Sbjct: 129 DWTEMLLRMYLRWTESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS +   V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 189 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G  
Sbjct: 249 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWG-- 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 307 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|145352937|ref|XP_001420790.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581025|gb|ABO99083.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 343

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 134/338 (39%), Positives = 207/338 (61%), Gaps = 5/338 (1%)

Query: 23  MSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++         + KL++    ++ ++ + + Y +  +E  +   +  D   D E+  +A
Sbjct: 1   MADPSVTGDPKEFQKLSKALGELTSVVEQYARYKECMKEISEARAMAKDAAGDDEMVAMA 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + E+ A+  E   L   +   LLPKD  D+K+ +LEIRAGTGG EA ++ GDL+RMY R+
Sbjct: 61  KEEIDALTTESDALVETMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWAGDLYRMYMRF 120

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    W+  V++++  D GGYKEIV  I G  V+S +K+E+GVHRVQRVPATE  GR+ T
Sbjct: 121 AEREGWQTSVVTNNPADAGGYKEIVVEIKGDDVYSSLKWEAGVHRVQRVPATETQGRIQT 180

Query: 200 SAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSS 258
           S ATVAV+PE  E++V I   D+ I T R+ G+GGQ+VN  ++A+ + H PTGI +  + 
Sbjct: 181 STATVAVMPEVDEVEVKIDDNDLDISTARSGGAGGQNVNKVETAIDLMHKPTGIRVFCTE 240

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITD 318
           E++Q +NR+RAM++LRA+L++++ +      S  RK Q+GSG RSE+IRTYN+   R++D
Sbjct: 241 ERTQMKNRIRAMQILRAKLFELQLEEQRKAVSDKRKSQVGSGSRSEKIRTYNWKDSRVSD 300

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           HRI      L+  L G I   I  +    Q + +   +
Sbjct: 301 HRIGANFS-LQNFLDGDIKGAIGGMQALEQEEKLAELN 337


>gi|294786650|ref|ZP_06751904.1| peptide chain release factor 1 [Parascardovia denticolens F0305]
 gi|315226253|ref|ZP_07868041.1| peptide chain release factor RF1 [Parascardovia denticolens DSM
           10105]
 gi|294485483|gb|EFG33117.1| peptide chain release factor 1 [Parascardovia denticolens F0305]
 gi|315120385|gb|EFT83517.1| peptide chain release factor RF1 [Parascardovia denticolens DSM
           10105]
          Length = 366

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 141/356 (39%), Positives = 204/356 (57%), Gaps = 20/356 (5%)

Query: 14  NRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           + + EIE +MS+       D   KL   +A +  I+S    Y Q + + +       +  
Sbjct: 15  DEYHEIERQMSQPEVASDPDKIRKLGRRHAELGQIVSAYESYRQIRDDLEAAQEFASEDE 74

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           S          E   +E ++ E   ++   L+P+D DD +  I+EI+AG GG EAALF G
Sbjct: 75  S-------FAQEAQRLEADLPEAAEKLRTALIPRDPDDARDTIMEIKAGAGGEEAALFAG 127

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVH 183
           DL RMY RYA  R W  E++S +  + GG K+I              GV++ +K+E GVH
Sbjct: 128 DLLRMYTRYAEKRSWSTEIMSQNMTELGGVKDIQIAFRSKGVVAPADGVWASLKYEGGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           RVQR+P TE+ GR+ TSAA V V PE    + ++++  +D++ID   +SG GGQ VNTT 
Sbjct: 188 RVQRIPVTESQGRIQTSAAGVIVFPEADDDDDEIEVDPKDLKIDIFMSSGPGGQSVNTTY 247

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ +  A E +  R  Q+ S 
Sbjct: 248 SAVRMTHIPTGIVVSMQDEKSQIQNRQAALRVLKSRLLAMKHEEEAQEAADMRHSQVRSL 307

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           DRSERIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A +   + S +
Sbjct: 308 DRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIKADEEARLASQN 363


>gi|239982315|ref|ZP_04704839.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291454159|ref|ZP_06593549.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357108|gb|EFE84010.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 358

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 215/352 (61%), Gaps = 21/352 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A+IE R+++           KL + YA ++PI+     + Q  ++ +   
Sbjct: 3   EAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +E    EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAADDPD-------FAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG----------RGVF 173
           E+ALF GDL RMY RYA    WK E++ S++++ GGYK++   +            +GV+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTELIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVW 175

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           +R+K+E GVHRVQRVPATE+ GR+HTSAA V V PEA EIDV+I   D+RID  R+SG G
Sbjct: 176 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEIDVEINQNDLRIDVYRSSGPG 235

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++    +EKSQ QN+ +A+++LR+RL    ++    E +  
Sbjct: 236 GQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADA 295

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+ Q+ + DRSE+IRTYN+ + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RRSQVRTVDRSEKIRTYNYPENRISDHRVGFKAYNLDQVLDGELDAVIQACV 347


>gi|301156116|emb|CBW15587.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1]
          Length = 347

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +   K   L +E  ++  ++  I   +Q  ++ + L  + 
Sbjct: 10  DAKVERLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLEDVEGLLELA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ +   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 70  VEAEDEETFNEAV-----AELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ 
Sbjct: 125 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS A   V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 185 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G  
Sbjct: 245 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 303 -SQIRSYVLDDARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 345


>gi|152979178|ref|YP_001344807.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
 gi|150840901|gb|ABR74872.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
          Length = 335

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 172/340 (50%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+   + +    +   K   L +E +++  ++  I   DQ  ++   L  +  +  
Sbjct: 2   ERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAVVDTIKKLDQGLEDVDGLLELAVEGE 61

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
                 +       A   E+ +   ++ +  +     D   C ++++AG+GG+EA  +  
Sbjct: 62  DQETFDEAV-----AELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTE 116

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ R   
Sbjct: 117 MLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSP 176

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS A   V PE  +         D+RID  RASG+GGQHVN T+SAVRITHI
Sbjct: 177 FDSNNRRHTSFAAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHI 236

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           P+GI+V   +++SQH+N+ + MK L+A+LY++E ++   ++    + K  IG G    +I
Sbjct: 237 PSGIVVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWG---SQI 293

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 294 RSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 333


>gi|319948468|ref|ZP_08022604.1| peptide chain release factor 1 [Dietzia cinnamea P4]
 gi|319437888|gb|EFV92872.1| peptide chain release factor 1 [Dietzia cinnamea P4]
          Length = 361

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 144/357 (40%), Positives = 208/357 (58%), Gaps = 17/357 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+ + +  +E ++S+    +      ++ + +A ++PI+         + +      +
Sbjct: 12  IDDVLSEYGGLEAQLSDPTLHEDAAAARRVGKRFAELTPIVQCHRALVSTRDDAAAAREL 71

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            GD  S +E  D        ++ E  ELE  +  LL P+D  D    ++EI++G GG E+
Sbjct: 72  AGDDPSFAEEAD-------RLDAEAAELEARLADLLAPRDPHDADDVVMEIKSGEGGEES 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF  DL RMY RYA    W VEVL  +++D GGYK+   +I  R      V+SR+KFE 
Sbjct: 125 ALFAADLARMYTRYAEKHGWIVEVLGVTESDLGGYKDASFSIRSRQPSRDGVWSRLKFEG 184

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V V PE  ++  V+I   D+RID  R+SG GGQ VNT
Sbjct: 185 GVHRVQRVPVTESQGRVHTSAAGVLVFPEPEDVGPVEIDESDLRIDVYRSSGKGGQGVNT 244

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG +V   +E+SQ QN+ RA++VL ARL     +    E +  R  Q+ 
Sbjct: 245 TDSAVRITHLPTGTVVTCQNERSQLQNKQRALQVLAARLQAAAEEAAGAEAAEGRASQVR 304

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           + DRSERIRTYN+ + RI DHR+    + L+ VL G +D +++ L    + + +  A
Sbjct: 305 TVDRSERIRTYNYPENRIADHRVGFKAHNLDAVLDGDLDAVLDALAAEERRRRMEQA 361


>gi|170781877|ref|YP_001710209.1| peptide chain release factor 1 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189039963|sp|B0RAQ5|RF1_CLAMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169156445|emb|CAQ01593.1| peptide chain release factor 1 (RF-1) [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 359

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 138/361 (38%), Positives = 204/361 (56%), Gaps = 18/361 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + +  L     E++ ++ +           K+   YA +S I++  + + Q   +     
Sbjct: 3   ESVVQLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRIVAAHAEWTQLGDDLAAAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +   D    D        +++   +L      LL+P+D DD +  I+EI+ G GG+
Sbjct: 63  ELAEE---DPAFVDEIPGLEEQLDQAQEKL----RRLLIPRDPDDARDVIMEIKMGEGGA 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------VFSRMK 177
           E+ALF  DL RMY  YA  R+WK EVLS + +D GGYK++   I G        V++ +K
Sbjct: 116 ESALFAADLLRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIKGTSDDPALGVWAHLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAA-TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           +E GVHRVQRVPATE+ GR+HTSAA  + +       +V +   D++ID  R+SG GGQ 
Sbjct: 176 YEGGVHRVQRVPATESQGRIHTSAAGVLVIPEVEEVEEVPLDPNDLKIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +EKSQ QNR   M+VLRAR+   +++ +  E SA R+ 
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARVLAKQQEEIDAEASAVRRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + DRSERIRTYNF + RI DHR     Y L+ V+ G +D ++   + A +   + + 
Sbjct: 296 QIRTMDRSERIRTYNFPENRIADHRTGYKAYNLDAVMDGALDPVVESCIQADEEARLDAL 355

Query: 356 S 356
            
Sbjct: 356 G 356


>gi|311743960|ref|ZP_07717766.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272]
 gi|311313090|gb|EFQ83001.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272]
          Length = 353

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 146/359 (40%), Positives = 211/359 (58%), Gaps = 23/359 (6%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L    AE+E +M++           ++ + YA ++ +I     + Q   + Q    +
Sbjct: 5   VETLVAEHAELERKMADPSVHADPVQAKRIGQRYAELTAVIRTYREWQQTGDDLQAAREL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D +            V+ +E  + EL   +  LL+P+D  D K  ILEI+ G GG E+
Sbjct: 65  RMDDD------------VVQLEARLPELGERLQRLLVPRDPGDAKDVILEIKGGEGGEES 112

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF-------SRMKF 178
           ALF  DL RMY R+A  R W+V++L S+++  GGYK + A +  R          + +KF
Sbjct: 113 ALFAADLLRMYTRFAERRGWRVDILDSTESALGGYKSVTAAVKARSTPEPGEAPGALLKF 172

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E GVHRVQRVP TE+ GR+HTSAA V VLPEA ++DV+I   D+RID  R+SG GGQ VN
Sbjct: 173 EGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEDVDVEIHDSDLRIDVYRSSGPGGQSVN 232

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PTG++    +EKSQ QN+ +A+++LRARL +  +     E S  R+ QI
Sbjct: 233 TTDSAVRITHVPTGVVASCQNEKSQLQNKEQALRILRARLLEAAQATADAEASDARRSQI 292

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            + DRSER+RTYNF + RI+DHR     Y L+ V+ G ++D+I  L+ A  A  + +  
Sbjct: 293 RTVDRSERVRTYNFPENRISDHRTGFKAYNLDAVMDGGLEDVIGSLVEADLADRLAAVE 351


>gi|117927849|ref|YP_872400.1| peptide chain release factor 1 [Acidothermus cellulolyticus 11B]
 gi|166223522|sp|A0LSK4|RF1_ACIC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117648312|gb|ABK52414.1| bacterial peptide chain release factor 1 (bRF-1) [Acidothermus
           cellulolyticus 11B]
          Length = 364

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 147/345 (42%), Positives = 205/345 (59%), Gaps = 14/345 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + ++   +A++E R+++            L   YA + PI+     +        D+ 
Sbjct: 3   EAVEEVLREYADLERRLADPAVHADPRTARTLGRRYAQLGPIVEAYRRWKALD---ADVA 59

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                  +D   R          E     L      LL P D +D K  I++I+AG GG 
Sbjct: 60  AAHELAAADPAFRAEIPALEAEREAVAERL----RSLLAPADPNDGKDVIMQIKAGEGGE 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS---GRGVFSRMKFES 180
           E+ALF GDL RMY RYA  R WK E+L ++++D GGYK++   I      G +SR+KFE 
Sbjct: 116 ESALFAGDLLRMYLRYAERRGWKTEILDATESDLGGYKDVTVAIRADGSEGAWSRLKFEG 175

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GR+HTSA  V V+PEA E+DV I   D+RID  R+SG GGQ VNTT
Sbjct: 176 GVHRVQRVPVTESQGRIHTSAVGVLVMPEAEEVDVQIDPNDLRIDVFRSSGPGGQSVNTT 235

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +EKSQ QN+  A+++LR+RL  + ++    + +A R+ Q+ +
Sbjct: 236 DSAVRITHLPTGIVVSCQNEKSQLQNKETALRILRSRLLALAQEEAEAQAAAQRRSQVRT 295

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            DRSERIRTYNF + RI+DHR+N   Y L+ VL G +D +I  L+
Sbjct: 296 VDRSERIRTYNFPENRISDHRVNYKAYNLDQVLDGDLDGVIQALV 340


>gi|238060791|ref|ZP_04605500.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
 gi|237882602|gb|EEP71430.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
          Length = 362

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 154/347 (44%), Positives = 209/347 (60%), Gaps = 18/347 (5%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +S +++  L + +AE+E R+++       +A  ++   YA +SP         +   E +
Sbjct: 1   MSSERLAALLDEYAELEKRLADPAIHADQNAARRVGRRYAELSP-------LHKAAAELE 53

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
                +      +        E  +I   +  LE  +  LL+P+D  D K  I+EI+AG 
Sbjct: 54  QARADLAAARELAAEDPSFAAETESIAAGLPALEERLAELLIPRDPHDAKDVIVEIKAGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVF 173
           GG E+ALF GDL RMY RYA  R W  EV+ + D+D GG K++   I          GV+
Sbjct: 114 GGEESALFAGDLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAIKTKGVPEGGNGVW 173

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           SR+K+E GVHRVQRVP TE+ GR+HTSAA V VLPEA ++DV +   D+RID  R+SG G
Sbjct: 174 SRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEDVDVSVDPNDLRIDVFRSSGPG 233

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI+V   +EKSQ QNR +AM++LRARL    +++     S  
Sbjct: 234 GQSVNTTDSAVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARLLAAAQEQADAAASDA 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
           RK Q+ + DRSERIRTYNF Q RITDHRI  T Y L+  L G +D +
Sbjct: 294 RKAQVRTVDRSERIRTYNFPQNRITDHRIGYTAYNLDLALAGELDGV 340


>gi|297539161|ref|YP_003674930.1| peptide chain release factor 2 [Methylotenera sp. 301]
 gi|297258508|gb|ADI30353.1| peptide chain release factor 2 [Methylotenera sp. 301]
          Length = 351

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    D   K   L +E  A+  ++  +   +    + ++L  + 
Sbjct: 14  ETKSQRLEEVNGLLEDPKVWDDNKKSQALGKEKRALELVVHSLQAVESSLNDSRELFEMA 73

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N D  +  +        ++          +  +     D  +C +E ++G+GG+EA 
Sbjct: 74  REENDDDTLLSVDVDSQAVEKQVAEM-----EFRRMFSGELDSNNCFIEFQSGSGGTEAQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RY   + +KVEVL  SD D  G K     ++G   +  ++ E+GVHR+ 
Sbjct: 129 DWAAMLLRMYLRYCERKGFKVEVLEESDGDVAGIKGASIKVTGDYAYGTLRTENGVHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ + HTS A+V + PE  +   +DI   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 189 RKSPFDSNAKRHTSFASVQIFPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTDSAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PT  +V   +++SQH+NR  AM +L+  LY++E  +   ++ A    K  IG G  
Sbjct: 249 ITHLPTNTVVQCQNDRSQHRNRDEAMNMLKGALYNLELNKRNADKQALEDAKTDIGWG-- 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   QGRI D R N+ +   + VL G +D  I   L  
Sbjct: 307 -HQIRSYVLDQGRIKDLRTNVEIGNTQGVLDGDLDPFIQVSLKQ 349


>gi|312884019|ref|ZP_07743736.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368477|gb|EFP96012.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 332

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 110/336 (32%), Positives = 183/336 (54%), Gaps = 15/336 (4%)

Query: 17  AEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   + +    +       L +E +++  ++  I   +Q  ++ + L  +  +   D 
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAVVETIDQLNQGVEDVEGLLELAVEEE-DQ 60

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           E  D  + E++ +E ++ +LE    +  +     D   C +++++G+GG+EA  +   L 
Sbjct: 61  ETFDEIEPELIELEFKLEKLE----FRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMLL 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A  + +K EV+  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWAEAKGFKTEVIEVSEGEVAGLKGATIKISGEYAYGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           SGR HTS A+  + PE  +   +DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT 
Sbjct: 177 SGRRHTSFASAFIYPEIDDNIQIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTN 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
            +V   +++SQH+N+ +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y
Sbjct: 237 TVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
                RI D R  +     + VL G +D  I   L 
Sbjct: 294 VLDDSRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 329


>gi|73914009|sp|Q9CP66|RF2_PASMU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 173/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +   K   L +E  A+  +++ I   DQ  ++ + L  + 
Sbjct: 28  DAKVERLEEVNAELEQPDVWNEPEKAQALGKERVALEGVVNTIHTLDQGLEDVEGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   ++   +         ++  +     + +  +     D   C ++++AG+GG+EA 
Sbjct: 88  IEAEDEATFHEAVAELEELEQQLAK-----LEFRRMFSGQHDAADCYVDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ 
Sbjct: 143 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIKSATIKVSGEYAFGWLRTETGIHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS +   V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIP+GI+V   +++SQH+N+ + MK L+A+LY++E ++   ++    + K  IG G  
Sbjct: 263 ITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|1172913|sp|P43918|RF2_HAEIN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|309751145|gb|ADO81129.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
           R2866]
          Length = 365

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 173/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L +E  ++  +++ I   +Q  ++   L  + 
Sbjct: 28  DAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ +   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 88  IEAEDEDTFNEAV-----AELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ 
Sbjct: 143 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS +   V PE  +         D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G  
Sbjct: 263 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|295836498|ref|ZP_06823431.1| peptide chain release factor 1 [Streptomyces sp. SPB74]
 gi|197699008|gb|EDY45941.1| peptide chain release factor 1 [Streptomyces sp. SPB74]
          Length = 357

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 142/351 (40%), Positives = 213/351 (60%), Gaps = 20/351 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    AE+E  +++           +L++ YA ++PI+     +     +     
Sbjct: 3   EAVEELIGEHAELERTLADPSVHADQANARRLSKRYAELTPIVGTYRAWRATGDDIATAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +             E+  +++   EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAAEDPE-------FAAEIKQLDERREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG---------RGVFS 174
           E+ALF GDL RMY RYA    WK E+L +++++ GGYK++   +           +GV++
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVAVKTKGNANPEPGQGVWA 175

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
           RMK+E GVHRVQRVP+TE+ GR+HTSAA V V PEA E+DV+I   D+RID  R+SG GG
Sbjct: 176 RMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEEVDVEINPNDLRIDVYRSSGPGG 235

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVRITH+PTG++    +EKSQ QN+ +A+++LR+RL    ++    E +  R
Sbjct: 236 QSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADAR 295

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           + Q+ + DRSE+IRTYNF + RI+DHR+    Y L+ VL G +D +I   +
Sbjct: 296 RSQVRTVDRSEKIRTYNFPENRISDHRVGFKAYNLDQVLDGELDAVIQACV 346


>gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus
           faecalis TUSoD Ef11]
 gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus
           faecalis TUSoD Ef11]
          Length = 366

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 181/344 (52%), Gaps = 10/344 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--I 66
           +  L+   AE E RM E    D      +     + +  K   + Q  +E  +L  +  +
Sbjct: 26  LDQLEEDIAEAENRMGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFEL 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D+EI++  +  +  +++ +   E      LL  +  D  + ++E+  G GG+E+ 
Sbjct: 86  QQEEYDAEIQEELEERIHLLQERLTTYEL----SLLLNEPYDHNNALIELHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    ++VE L     D+ G K +   I G   +  +K E GVHR+ 
Sbjct: 142 DWGSMLLRMYTRWAESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS  +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVR
Sbjct: 202 RISPFDSAKRRHTSFCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTG +V + +++SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    
Sbjct: 262 ITHIPTGTVVASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGS 320

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F     + DHR N     ++ V+ G +D  I+  L   
Sbjct: 321 QIRSYVFHPYSMVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQR 364


>gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804]
 gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii]
          Length = 337

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 178/340 (52%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R   +   + +    +       L  E  ++  +++ ++       +  +L  +    +
Sbjct: 4   ERLQVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVTTLTALRSGVADALELFELAS-AD 62

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D    +  + +    ++++  LE    +  +  +  D  +C L+I+AG GG+EA  +  
Sbjct: 63  DDDATLESIESDADGFQQQLEGLE----FRRMFSNPADPLNCFLDIQAGAGGTEAQDWAS 118

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L R Y +YA  + +K EVL  S+ +  G K     + G   F  ++ E+GVHR+ R   
Sbjct: 119 MLLRQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGDYAFGYLRTETGVHRLVRKSP 178

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++SG  HTS A+V V PE     ++D+   D+R+DT RASG+GGQH+N TDSAVR+TH+
Sbjct: 179 FDSSGGRHTSFASVFVYPEVDDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHL 238

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI+V   +++SQH+NR  AM++L+++LY++E +    E+    + K  +G G    +I
Sbjct: 239 PTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWG---HQI 295

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 296 RSYVLDQSRIKDLRTNVEISNTQKVLDGDLDTFIQASLKQ 335


>gi|301629497|ref|XP_002943876.1| PREDICTED: peptide chain release factor 1-like [Xenopus (Silurana)
           tropicalis]
          Length = 460

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 148/267 (55%), Positives = 195/267 (73%), Gaps = 2/267 (0%)

Query: 92  ELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS 151
            LENE+  LLLPKD DD ++  LEIRAGTGG E+ALF GDL R+Y RYAA   W+VE++S
Sbjct: 191 FLENELQRLLLPKDPDDARNAFLEIRAGTGGDESALFAGDLARVYTRYAATVGWRVEIMS 250

Query: 152 SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA 211
           +++++ GGYKE+V  I G  V+  ++FESG HRVQRVPATE  GR+HTSA TVAV+PE  
Sbjct: 251 ANESELGGYKEVVLRIEGDHVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPD 310

Query: 212 EIDVDI-PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRA 269
           E    +    D+RIDT RASG+GGQH+N TDSAVR+ HIPTGI+      +SQH N+ +A
Sbjct: 311 EQQAIMLNPADLRIDTFRASGAGGQHINKTDSAVRVVHIPTGIVAECQDGRSQHSNKAKA 370

Query: 270 MKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLE 329
           ++VL+AR+ D ER   A + +A R+  IGSGDRS+RIRTYNF QGR TDHRINLTLYKL 
Sbjct: 371 LQVLQARIQDKERSERAAKEAAVRRGLIGSGDRSDRIRTYNFPQGRFTDHRINLTLYKLL 430

Query: 330 YVLQGYIDDIINPLLTAHQAKMIGSAS 356
            +++G + +++  L  A +A+++    
Sbjct: 431 AIMEGDLGEVLQALQHAREAELLVEME 457


>gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
           11741]
 gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
           11741]
          Length = 355

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 115/357 (32%), Positives = 186/357 (52%), Gaps = 19/357 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL---HT 64
            +  L+ + AE E RM+E    D   K  E  A  + + +K   + +  +   DL     
Sbjct: 8   DLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDLGVSLE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E++   +           +L       +L  +  D  + ILEI  G GG+E
Sbjct: 68  LLQEIPDDEELQADLEENYQH----AEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A+   +KVE +     DD G K +   I G+  +  ++ E GVHR
Sbjct: 124 SQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++GR HTS A+V V+PE    ++V++  EDI+++  RASG+GGQH+N T SA
Sbjct: 184 LVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VR+ HIPTGI+V + +++SQ QNR  A  +LRA+LY +E +    +R+A +  Q  IG G
Sbjct: 244 VRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEVEEKEKQRAAIQGEQLDIGWG 303

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
               +IR+Y F     + DHR +     ++ V+ G +D  IN  L       +  A+
Sbjct: 304 ---SQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQW----KLQQAN 353


>gi|218555439|ref|YP_002388352.1| peptide chain release factor 2 [Escherichia coli IAI1]
 gi|226739127|sp|B7LYF5|RF2_ECO8A RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218362207|emb|CAQ99825.2| peptide chain release factor RF-2 [Escherichia coli IAI1]
          Length = 365

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|157162351|ref|YP_001459669.1| peptide chain release factor 2 [Escherichia coli HS]
 gi|166977373|sp|A8A432|RF2_ECOHS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157068031|gb|ABV07286.1| peptide chain release factor 2 [Escherichia coli HS]
          Length = 365

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069]
 gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella
           koreensis DSM 16069]
          Length = 365

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+E  + +    +       L +E A +  +++ I   +    + Q+L  + 
Sbjct: 28  DSKQERLVEVERELEQPDVWNDQERAQSLGQERAKLETVVNTIKDLEAGIDDNQELLELS 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +    + ++            +     + +  +     D+ +  L+I+AG+GG+EA 
Sbjct: 88  VEEDDAESVAEIENEVKQLNTSLEK-----LEFRRMFSGEMDENNAYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   R +K EV   SD D  G K     + G   +  ++ E+GVHR+ 
Sbjct: 143 DWASILLRMYLRWCESRGFKAEVTEESDGDVAGIKSATIRVEGEYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V V PE  +  D+++   D+R+DT RASG+GGQHVN TDSA+R
Sbjct: 203 RKSPFDSGNRRHTSFASVFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQHVNKTDSAIR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V   +++SQH+NR +AM +++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 LTHIPTGIVVQCQNDRSQHKNRAQAMSMMKAKLYELEMQKQREEQQALEDTKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R          VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDQSRIKDLRTGHESSNTTAVLDGDLDSFIEASLKA 363


>gi|295676932|ref|YP_003605456.1| hypothetical protein BC1002_1882 [Burkholderia sp. CCGE1002]
 gi|295436775|gb|ADG15945.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
          Length = 367

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            D   R  E+   + +    +       L +E   +   + K++       + QDL  + 
Sbjct: 30  DDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVNDAQDLFDMA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  +         A  + I     ++ +  +  +  D  +  L+I+AG GG+EA 
Sbjct: 90  REEADDETLLACE-----ADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  ++ D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS ++V V PE  +  +V+I   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+P+GI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G  
Sbjct: 265 ITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 323 -HQIRSYVLDNSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365


>gi|293189723|ref|ZP_06608439.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309]
 gi|292821313|gb|EFF80256.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309]
          Length = 364

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 137/358 (38%), Positives = 204/358 (56%), Gaps = 19/358 (5%)

Query: 12  LKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L   + ++E +M++  ++       ++   YA +  + +          + +    +  +
Sbjct: 13  LLQEYEQVEAQMADPQTLADPQLMRRVGRRYAELGRVKAAADRLASASGDLEAARELAAE 72

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             S ++     + E  A  + + ++       L P+D +D    ILEI+AG GG E+ALF
Sbjct: 73  DRSFADEIPALEEEEAAAHEALVKI-------LAPRDPEDAMDVILEIKAGEGGEESALF 125

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESG 181
             DL RMY RYA    W V  +S++  + GG+K+I   I          GV++ +K+E G
Sbjct: 126 ASDLARMYARYAEAHGWSVTEMSATHTELGGFKDITLAIRAKGTPAPDEGVWAHLKYEGG 185

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTT 240
           VHRVQRVP TE+ GR+HTSAA V V+PE  + +   I   D+RID  R+SG GGQ VNTT
Sbjct: 186 VHRVQRVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDPNDLRIDVYRSSGPGGQSVNTT 245

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+GI+V+  +EKSQ QN+  A++VL +RL    R +   E SA R  Q+ +
Sbjct: 246 DSAVRITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKKEAEASAQRLSQVRT 305

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            DRSERIRTYNF + RI DHR     + L+ VL G +D +I  L  A +A+ + +A++
Sbjct: 306 VDRSERIRTYNFPENRIADHRTGFKAHNLDAVLSGALDAVIASLQEADEAERLAAAAQ 363


>gi|154509273|ref|ZP_02044915.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798907|gb|EDN81327.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC
           17982]
          Length = 364

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 138/358 (38%), Positives = 204/358 (56%), Gaps = 19/358 (5%)

Query: 12  LKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L   + ++E +M++  ++       ++   YA +  + +          + +    +  +
Sbjct: 13  LLQEYEQVEAQMADPQTLADPQLMRRVGRRYAELGRVKAAADRLASASGDLEAARELAAE 72

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             S ++     + E  A  + + ++       L P+D +D    ILEI+AG GG E+ALF
Sbjct: 73  DRSFADEIPALEEEEAAAHEALVKI-------LAPRDPEDAMDVILEIKAGEGGEESALF 125

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESG 181
             DL RMY RYA    W V  +S++  + GG+K+I   I          GV++ +K+E G
Sbjct: 126 ASDLARMYARYAEAHGWSVTEMSATHTELGGFKDITLAIRAKGTPAPDEGVWAHLKYEGG 185

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTT 240
           VHRVQRVP TE+ GR+HTSAA V V+PE  + +   I   D+RID  R+SG GGQ VNTT
Sbjct: 186 VHRVQRVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDPNDLRIDVYRSSGPGGQSVNTT 245

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIP+GI+V+  +EKSQ QN+  A++VL +RL    R R   E SA R  Q+ +
Sbjct: 246 DSAVRITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARARKEAEASAQRLSQVRT 305

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            DRSERIRTYNF + RI DHR     + L+ VL G +D +I  L  A +A+ + +A++
Sbjct: 306 VDRSERIRTYNFPENRIADHRTGFKAHNLDAVLSGALDAVIASLQEADEAERLAAAAQ 363


>gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118]
 gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
           UCC118]
 gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 355

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 115/357 (32%), Positives = 186/357 (52%), Gaps = 19/357 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL---HT 64
            +  L+ + AE E RM+E    D   K  E  A  + + +K   + +  +   DL     
Sbjct: 8   DLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDLGVSLE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E++   +           +L       +L  +  D  + ILEI  G GG+E
Sbjct: 68  LLQEIPDDEELQADLEENYQH----AEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A+   +KVE +     DD G K +   I G+  +  ++ E GVHR
Sbjct: 124 SQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++GR HTS A+V V+PE    ++V++  EDI+++  RASG+GGQH+N T SA
Sbjct: 184 LVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VR+ HIPTGI+V + +++SQ QNR  A  +LRA+LY +E +    +R+A +  Q  IG G
Sbjct: 244 VRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWG 303

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
               +IR+Y F     + DHR +     ++ V+ G +D  IN  L       +  A+
Sbjct: 304 ---SQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQW----KLQQAN 353


>gi|255324516|ref|ZP_05365633.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
           SK141]
 gi|255298422|gb|EET77722.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
           SK141]
          Length = 358

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 148/358 (41%), Positives = 213/358 (59%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  IE++M++         + KL++ YA + PII       Q +++  D   +
Sbjct: 8   VDDIVSEYQGIEMQMADPEVAGDQKQFRKLSKRYAELRPIIMVNDELTQAREDLADAKEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +   E  D        +EK +  LE ++  LL P+D  D +  I+EI+AG GG EA
Sbjct: 68  AYEDHDFQEEAD-------RLEKSVENLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMYERYA    +  EVL  +++D GG K++  +   +       +S  KFE 
Sbjct: 121 ALFAGDLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E++  +I  +DIR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QN+ RA++VL+ARL  +ER+    E    R  Q+ 
Sbjct: 241 TDSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSERIRTYN+ + RITDHRI      L+ VL G ++D+I  L    +A+ + +  
Sbjct: 301 TMDRSERIRTYNWPENRITDHRIGYKANNLDSVLNGDMNDLIKALQDQERAERLEAEG 358


>gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|6174964|sp|P28367|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis]
 gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis]
 gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 366

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 176/343 (51%), Gaps = 10/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   + R AE++ +M++    +   K        + +   ++ Y +  +  ++L     
Sbjct: 25  DLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHD 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +     ++E           E E+  L    +  D  + ILE+  G GG+E+  
Sbjct: 85  LLKEEPDTDLQLELEKELKSLTKEFNEFELQLL--LSEPYDKNNAILELHPGAGGTESQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   R +KVE L     D+ G K +   I G   +  +K E GVHR+ R
Sbjct: 143 WGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   ++SGR HTS  +  V+PE  +  D+DI  EDI++DT RASG+GGQHVNTTDSAVRI
Sbjct: 203 ISPFDSSGRRHTSFVSCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRS 303
           TH+PT ++V   +E+SQ +NR RAMK+L+A+LY    +    E    R  Q  IG G   
Sbjct: 263 THLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWG--- 319

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 320 SQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLR 362


>gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
 gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
          Length = 368

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 180/343 (52%), Gaps = 6/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +       A  E +M+     D   K     + ++ I S +  Y++   + +DL T+I 
Sbjct: 25  DLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISELNAIKSVVEHYERLNADCEDLQTLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D E  D  + EV+     + E  N     LL     D  + ILE+  G GG+E+  
Sbjct: 85  LA--DEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDKLNAILELHPGAGGTESQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+A  R +KVEVL   D D+ G K +   + G   +  +K E GVHR+ R
Sbjct: 143 WAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKGYNAYGYLKAEKGVHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   ++SGR HTS  +  V+PE  E  +V+I  ED+++DT RASG+GGQHVN T+SA+RI
Sbjct: 203 ISPFDSSGRRHTSFVSCDVVPEITEDIEVEIRTEDLKVDTYRASGAGGQHVNKTESAIRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V    E+SQ QNR RAM +LR++LY+ + +      +  R  Q        +
Sbjct: 263 THIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQKHLAEIRGEQ-SDIAWGSQ 321

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y F     + DHR ++    +  V+ G +D  I+  L + 
Sbjct: 322 IRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYLRSQ 364


>gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
 gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
          Length = 388

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 133/364 (36%), Positives = 204/364 (56%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   +   I +++ R  EIE++++    +       +L + +A +  ++S     DQ   
Sbjct: 28  MSESAQHAIDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNA 87

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  +      +++  ++            E     LL P D  D +  ++EI 
Sbjct: 88  DIEAAEDLANE--DPVFVQEAERLRGQLDLARTELTE-----LLAPSDPLDQEDALVEIH 140

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 141 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYG 200

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   DIR+D  R+SG GG
Sbjct: 201 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPADIRVDVYRSSGPGG 260

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+V   +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 261 QGVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 320

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + ++++ L      + + 
Sbjct: 321 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADEVRRRMA 380

Query: 354 SASE 357
             SE
Sbjct: 381 QQSE 384


>gi|311278189|ref|YP_003940420.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
 gi|308747384|gb|ADO47136.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
          Length = 365

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  ++   Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLNQMAQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K EV+  S+ +  G K     ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGLKSATIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIP+G++    +++SQH+N+ +AMK ++A+LY++E ++   E+ A    K  IG G  
Sbjct: 263 ITHIPSGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|28373662|pdb|1MI6|A Chain A, Docking Of The Modified Rf2 X-Ray Structure Into The Low
           Resolution Cryo-Em Map Of Rf2 E.Coli 70s Ribosome
          Length = 365

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY+VE ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|311898376|dbj|BAJ30784.1| putative peptide chain release factor 1 [Kitasatospora setae
           KM-6054]
          Length = 358

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 148/349 (42%), Positives = 212/349 (60%), Gaps = 18/349 (5%)

Query: 7   KQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A++E R+++           KL + YA ++PI      + Q  ++     
Sbjct: 3   EAVEELLVEHADLEKRLADPSVHADQANARKLAKRYAELTPITRTYLAWRQAGEDIVAAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  +             E  A E    EL  E+  LL+P+D +DDK  ILE++AG GG 
Sbjct: 63  ELATEDPD-------FIAEAKASEARQDELTEELRLLLVPRDPNDDKDVILEVKAGEGGE 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVFSRM 176
           E+ALF GDL RMY RYA    WK E++ ++++D GGYK++   +         +GV++R+
Sbjct: 116 ESALFAGDLLRMYLRYAERVGWKTELIDANESDLGGYKDVSVAVKTRGSAEPGQGVWARL 175

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+E GVHRVQRVPATE+ GR+HTSAA V V PEA E++V+I   D+RID  R+SG GGQ 
Sbjct: 176 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEEVEVEIHANDLRIDVYRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+    +EKSQ QN+ +AM++LR+RL    ++    E S  R+ 
Sbjct: 236 VNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREASDARRS 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           Q+ + DRSERIRTYNF + RI+DHR     Y L+ VL G ++ +I   +
Sbjct: 296 QVRTVDRSERIRTYNFPENRISDHRTGFKSYNLDQVLDGDLNAVIQSCV 344


>gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
 gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
          Length = 367

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 179/346 (51%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHT 64
            +   + R  E+E +M+     D              +  ++ +    +++ +  +  + 
Sbjct: 26  DLETKQARIRELEEQMAAPNFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYE 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I +   +   ++L        +             LL  +  D  + ILE+  G GG+E
Sbjct: 86  LIKEEPDEDLQQELVAEAKKLTKDFSE-----FELQLLLNEPYDKNNAILELHPGAGGTE 140

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE L     ++ G K +   I G   +  +K E GVHR
Sbjct: 141 SQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHR 200

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +ASGR HTS  +  V+PE  +  +++I  E+I++DT R+SG+GGQHVNTTDSA
Sbjct: 201 LVRISPFDASGRRHTSFVSCEVMPEMDDDIEIEIRPEEIKVDTYRSSGAGGQHVNTTDSA 260

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VRITHIPTGI+V   SE+SQ +NR +AM +L+A+LY  + +    E +  R  Q  IG G
Sbjct: 261 VRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWG 320

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +   +IR+Y F     + DHR N+ +  ++ V+ G ID  I+  L 
Sbjct: 321 N---QIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLR 363


>gi|147569|gb|AAA24520.1| peptide chain release factor 2 [Escherichia coli]
          Length = 365

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHRV 
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRVV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  R SG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia
           Coli
          Length = 365

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQXKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +        D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRXFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +A K  +A+LY+VE ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|319777684|ref|YP_004137335.1| peptide chain release factor 1 [Mycoplasma fermentans M64]
 gi|318038759|gb|ADV34958.1| Peptide chain release factor 1 [Mycoplasma fermentans M64]
          Length = 358

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 228/353 (64%), Gaps = 9/353 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+KN +  +  ++ +   ++    Y K+++E   I  I    + Y   + +  D   +
Sbjct: 9   LSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I   N +  +   A+  +   E ++ +LE E+  L+LPKD +DDK+ I+EIR   GG EA
Sbjct: 69  INSKNEEEVL--FAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGDEA 126

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +F GDLF+MY ++A    +K++V+SSS    GG+ +IV +I G   +S++KFESGVHRV
Sbjct: 127 NIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHRV 186

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVP TE++GR+HTS ATV V+PE  +  D++I  +D++IDT R+SG+GGQ VNTTDSAV
Sbjct: 187 QRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSAV 246

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V+   E+SQ  NR  A+ VL+++LYD+E ++   E +  RKL  G GDRS
Sbjct: 247 RITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLA-GHGDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+ Q R+TDHRI  +   L+ V++G +  II  LLT  Q + I  + 
Sbjct: 306 EKIRTYNYPQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQNQKIKESG 357


>gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
           CECT 5713]
          Length = 355

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 115/357 (32%), Positives = 186/357 (52%), Gaps = 19/357 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---T 64
            +  L+ + AE E RM+E    D   K  E  A  + + +K   + +  +   DL     
Sbjct: 8   DLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDLEVSLE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E++   +           +L       +L  +  D  + ILEI  G GG+E
Sbjct: 68  LLQEIPDDEELQADLEENYQH----AEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A+   +KVE +     DD G K +   I G+  +  ++ E GVHR
Sbjct: 124 SQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++GR HTS A+V V+PE    ++V++  EDI+++  RASG+GGQH+N T SA
Sbjct: 184 LVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VR+ HIPTGI+V + +++SQ QNR  A  +LRA+LY +E +    +R+A +  Q  IG G
Sbjct: 244 VRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWG 303

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
               +IR+Y F     + DHR +     ++ V+ G +D  IN  L       +  A+
Sbjct: 304 ---SQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQW----KLQQAN 353


>gi|257453984|ref|ZP_05619260.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
 gi|257448649|gb|EEV23616.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
          Length = 349

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   + R  E+ L +      +      K+++E + +  +I  I+  D K ++ + +  
Sbjct: 10  DIEAKQERLEEVNLELENPELWNDPERATKISKEKSQLDNVIGVITALDDKLEDAKAMID 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + +  + + D+      A   E      ++ +  +     D  +C ++I++G+GG+E
Sbjct: 70  LAVEADDATLLADVQ-----AELDEAEAKVADLEFKRMFSGEMDGNNCYVDIQSGSGGTE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+     +K E++  S     G K     + G   F  ++ E GVHR
Sbjct: 125 AQDWAEMLLRMYLRWCESHGFKAEIMELSAGGVAGIKSASIHVKGDYAFGWLRTEIGVHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +++   HTS A V V PE  +  ++DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           VRITH PTGI+V   +E+SQH N+  AMK+LRA+LY+ E  +   ++ A    K  IG G
Sbjct: 245 VRITHQPTGIVVACQNERSQHANKDTAMKMLRAKLYEREMMQRMEKQQALEETKSDIGWG 304

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 305 ---SQIRSYVLDDSRIKDLRTGVETSNTQAVLDGDLDKFIEASLKA 347


>gi|16130793|ref|NP_417367.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. MG1655]
 gi|89109670|ref|AP_003450.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. W3110]
 gi|170082452|ref|YP_001731772.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238902016|ref|YP_002927812.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
 gi|2507293|sp|P07012|RF2_ECOLI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229576667|sp|B1XEH8|RF2_ECODH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|259585244|sp|C5A0G3|RF2_ECOBW RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|28373696|pdb|1ML5|Z Chain Z, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|2367172|gb|AAC75929.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675703|dbj|BAE76956.1| peptide chain release factor RF-2 [Escherichia coli str. K12
           substr. W3110]
 gi|169890287|gb|ACB03994.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238861985|gb|ACR63983.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
 gi|260448063|gb|ACX38485.1| hypothetical protein EcDH1_0801 [Escherichia coli DH1]
 gi|315137490|dbj|BAJ44649.1| peptide chain release factor RF-2 [Escherichia coli DH1]
 gi|228558|prf||1806195A peptide chain-releasing factor:ISOTYPE=2
          Length = 365

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  R SG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|123585257|sp|Q3BUB7|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 374

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 165/344 (47%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +      +       L  E + +   +  I+       +  DL  + 
Sbjct: 28  DAKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +       ++   +  + +LE +           D  +  ++I+AG GG+EA 
Sbjct: 88  -ESEQDEDTALAVIADLDNYQAHVEKLEFQRM----FSGQMDSANAFVDIQAGAGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R WK E++  S  +  G K     I G   +  +K E GVHR+ 
Sbjct: 143 DWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS  +V V PE    I++DI   D+R D  R+SG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPT  +V   + +SQHQNR  AMK+L A+LY++E ++   E+ A    K  IG G  
Sbjct: 263 ITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNAEKDALEATKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR Y   Q RI D R  +     + VL G +D+ +   L A
Sbjct: 321 -SQIRNYVLDQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|269114934|ref|YP_003302697.1| Peptide chain release factor 1 [Mycoplasma hominis]
 gi|268322559|emb|CAX37294.1| Peptide chain release factor 1 [Mycoplasma hominis ATCC 23114]
          Length = 359

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 154/361 (42%), Positives = 232/361 (64%), Gaps = 8/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M    +  +  +KN++ E+  ++++      + AY ++ +E + +  I      Y   ++
Sbjct: 1   MEKTMYDSLLSIKNQYDELTEKLNDPNIYNDIKAYTRIAKEKSELQEIYDAFKKYQNIEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
                  ++  +  D E+ +LA+ ++     +++E+E EI  LLLP+D +D +  I+EIR
Sbjct: 61  LYFLSKEILT-NEKDQELIELAKNDIDNQMNQLQEIEEEIKELLLPQDENDKRDVIMEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +F GDLF+MY++YA ++ +K++++ S+    GGY +IV +I G  VFS++K
Sbjct: 120 GAAGGDEANIFSGDLFKMYQKYAEIKGFKIKIIDSTYGAAGGYSQIVFSIKGEKVFSQLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FE GVHRVQRVPATE  GRVHTS ATV VLPE  E   ++I  EDI ++  R+SG+GGQ 
Sbjct: 180 FERGVHRVQRVPATETQGRVHTSTATVTVLPEVDEDVKIEIRPEDIEVNVFRSSGAGGQS 239

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH PTG++V +  E+SQ QN+  A+KVL++RLY++E ++     S  RKL
Sbjct: 240 VNTTDSAVRITHKPTGLVVTSQDERSQIQNKETALKVLKSRLYELELRKREEAESGLRKL 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             G+GDRSE+IRTYN+ Q RITDHRI  +   L+ V++G +D II  L+   +AK I  A
Sbjct: 300 A-GTGDRSEKIRTYNYPQDRITDHRIGFSTS-LKVVMEGELDKIIEALIADEKAKKIIEA 357

Query: 356 S 356
            
Sbjct: 358 G 358


>gi|229819782|ref|YP_002881308.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333]
 gi|229565695|gb|ACQ79546.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333]
          Length = 373

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 142/359 (39%), Positives = 204/359 (56%), Gaps = 19/359 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +     EIE  +++            L   YA +  ++     + +   +      + 
Sbjct: 18  EPMLAEHREIEAALADPAVHADAGRARALGRRYAELGRVVGAYRAWRRAADDATAAAELA 77

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D           +A       L      +L+P+D DD +  ILEI+AG GG E+A
Sbjct: 78  VE---DDAFASEVPALQVAEADAAEHL----RRVLVPRDPDDGRDVILEIKAGEGGEESA 130

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFE 179
           LF GDL RMY R+A  R W+ +VL ++++D GGYK++   +          GV++ +K+E
Sbjct: 131 LFAGDLLRMYLRFAERRGWQTQVLEATESDLGGYKDVQVAVKSRGAAAPEDGVWAALKYE 190

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVN 238
            GVHRVQRVP TE+ GR+HTSAA V VLPE  +  +V+I   D+RID  R+SG GGQ VN
Sbjct: 191 GGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDDPGEVEIEGGDLRIDVFRSSGPGGQSVN 250

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PTGI+V+  +EKSQ QNR +AM+VLRARL   +++  A E +  R+ Q+
Sbjct: 251 TTDSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLLAAQQEAAAAEAAEARRSQV 310

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            + DRSERIRTYNF + RI DHR     Y L+ VL G +D ++   + A +A  + +  
Sbjct: 311 RTVDRSERIRTYNFPENRIADHRTGYKAYNLDAVLAGDLDAVVASAVEADEAARLAALG 369


>gi|15833017|ref|NP_311790.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           Sakai]
 gi|26249306|ref|NP_755346.1| peptide chain release factor 2 [Escherichia coli CFT073]
 gi|30064203|ref|NP_838374.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|170018863|ref|YP_001723817.1| peptide chain release factor 2 [Escherichia coli ATCC 8739]
 gi|170682178|ref|YP_001745044.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
 gi|215488191|ref|YP_002330622.1| peptide chain release factor 2 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218550138|ref|YP_002383929.1| peptide chain release factor 2 [Escherichia fergusonii ATCC 35469]
 gi|218559884|ref|YP_002392797.1| peptide chain release factor 2 [Escherichia coli S88]
 gi|218691016|ref|YP_002399228.1| peptide chain release factor 2 [Escherichia coli ED1a]
 gi|218696486|ref|YP_002404153.1| peptide chain release factor 2 [Escherichia coli 55989]
 gi|218701600|ref|YP_002409229.1| peptide chain release factor 2 [Escherichia coli IAI39]
 gi|218706397|ref|YP_002413916.1| peptide chain release factor 2 [Escherichia coli UMN026]
 gi|253772268|ref|YP_003035099.1| peptide chain release factor 2 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162803|ref|YP_003045911.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|260845559|ref|YP_003223337.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
           12009]
 gi|260857014|ref|YP_003230905.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
           11368]
 gi|260869568|ref|YP_003235970.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
           11128]
 gi|54039052|sp|P66024|RF2_ECO57 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54039053|sp|P66025|RF2_SHIFL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54041596|sp|P66023|RF2_ECOL6 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|189040000|sp|B1ITB1|RF2_ECOLC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739125|sp|B7MM78|RF2_ECO45 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739126|sp|B7NW32|RF2_ECO7I RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739128|sp|B7N7D5|RF2_ECOLU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739129|sp|B1LR73|RF2_ECOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739130|sp|B7LPA4|RF2_ESCF3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790914|sp|B7UHU0|RF2_ECO27 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790915|sp|B7LF76|RF2_ECO55 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790916|sp|B7MZI9|RF2_ECO81 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|26109714|gb|AAN81919.1|AE016766_7 Peptide chain release factor 2 [Escherichia coli CFT073]
 gi|13363235|dbj|BAB37186.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           Sakai]
 gi|30042460|gb|AAP18184.1| peptide chain release factor RF-2 [Shigella flexneri 2a str. 2457T]
 gi|169753791|gb|ACA76490.1| hypothetical protein EcolC_0818 [Escherichia coli ATCC 8739]
 gi|170519896|gb|ACB18074.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
 gi|215266263|emb|CAS10692.1| peptide chain release factor RF-2 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218353218|emb|CAU99134.1| peptide chain release factor RF-2 [Escherichia coli 55989]
 gi|218357679|emb|CAQ90320.2| peptide chain release factor RF-2 [Escherichia fergusonii ATCC
           35469]
 gi|218366653|emb|CAR04407.2| peptide chain release factor RF-2 [Escherichia coli S88]
 gi|218371586|emb|CAR19425.2| peptide chain release factor RF-2 [Escherichia coli IAI39]
 gi|218428580|emb|CAR09507.2| peptide chain release factor RF-2 [Escherichia coli ED1a]
 gi|218433494|emb|CAR14397.2| peptide chain release factor RF-2 [Escherichia coli UMN026]
 gi|253323312|gb|ACT27914.1| hypothetical protein ECBD_0846 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974704|gb|ACT40375.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|253978870|gb|ACT44540.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
 gi|257755663|dbj|BAI27165.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
           11368]
 gi|257760706|dbj|BAI32203.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
           12009]
 gi|257765924|dbj|BAI37419.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
           11128]
 gi|309703251|emb|CBJ02586.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC
           H10407]
 gi|313848742|emb|CAQ33203.2| peptide chain release factor RF2 [Escherichia coli BL21(DE3)]
 gi|323377221|gb|ADX49489.1| Peptide chain release factor 2 [Escherichia coli KO11]
          Length = 365

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|61214644|sp|Q73X48|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 357

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 148/340 (43%), Positives = 202/340 (59%), Gaps = 17/340 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + I  L    A++E R+S+     + D   K    +A ++PI+         +++ + 
Sbjct: 4   PVQTIDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLET 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  D +S          EV  +E  + +L+ ++  +L P+D  D    +LE+++G G
Sbjct: 64  ARELAADDDS-------FTAEVADLESRVAQLDTQLTDMLAPRDPHDADDIVLEVKSGEG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRM 176
           G E+ALF  DL RMY RYA    W V VL    +D GGYK+   +I        GV+SRM
Sbjct: 117 GEESALFAADLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GRVHTSAA V V PE  E  +V I   D+RID  R+SG GGQ
Sbjct: 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQ 236

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTG++V   +E+SQ QN+ RA++VL ARL  +  ++ + E SA+R 
Sbjct: 237 GVNTTDSAVRITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRA 296

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
            QI + DRSERIRTYNF + RITDHRI    + L+ VL G
Sbjct: 297 SQIRTVDRSERIRTYNFPENRITDHRIGFKAHNLDQVLDG 336


>gi|308190290|ref|YP_003923221.1| peptide chain release factor 1 [Mycoplasma fermentans JER]
 gi|307625032|gb|ADN69337.1| peptide chain release factor 1 [Mycoplasma fermentans JER]
          Length = 371

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 228/353 (64%), Gaps = 9/353 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+KN +  +  ++ +   ++    Y K+++E   I  I    + Y   + +  D   +
Sbjct: 22  LSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 81

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I   N +  +   A+  +   E ++ +LE E+  L+LPKD +DDK+ I+EIR   GG EA
Sbjct: 82  INSKNEEEVL--FAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGDEA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +F GDLF+MY ++A    +K++V+SSS    GG+ +IV +I G   +S++KFESGVHRV
Sbjct: 140 NIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHRV 199

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVP TE++GR+HTS ATV V+PE  +  D++I  +D++IDT R+SG+GGQ VNTTDSAV
Sbjct: 200 QRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSAV 259

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V+   E+SQ  NR  A+ VL+++LYD+E ++   E +  RKL  G GDRS
Sbjct: 260 RITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLA-GHGDRS 318

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+ Q R+TDHRI  +   L+ V++G +  II  LLT  Q + I  + 
Sbjct: 319 EKIRTYNYPQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQNQKIKESG 370


>gi|54288338|gb|AAV31626.1| predicted protein chain release factor A [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 335

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 166/299 (55%), Positives = 216/299 (72%), Gaps = 1/299 (0%)

Query: 30  DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKE 89
               +L  E + + PI  +I +  + + E  D   ++ +   D+++ ++ Q E   ++  
Sbjct: 30  SELAQLARELSELRPICDQIELVRRIEAELADALLMVEEAGEDADMLEMVQAEAGLLKTR 89

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + E  + +  +LLPKD DD ++ ILE+RAGTGG EAALF  +LF MY+R+AA   W  EV
Sbjct: 90  LPEAHSALQIMLLPKDKDDARNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGWNFEV 149

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           +  S+   GGYKE  ATISG  VF+R+KFESGVHRVQRVP TEA GR+HTSAATVAVLPE
Sbjct: 150 MEVSETGIGGYKEATATISGNDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPE 209

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSE-KSQHQNRLR 268
           A ++D+ I   D+R+D  RASG GGQ VNTTDSAVRITH+PTGI+V+  + KSQH+NR +
Sbjct: 210 AEDVDIRIDESDLRVDVFRASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAK 269

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYK 327
           AMK+LRAR+YD ER R+  +R+A RK Q+GSGDRSERIRTYNF QGR+TDHRIN TLYK
Sbjct: 270 AMKILRARIYDAERARVEAQRAAERKGQVGSGDRSERIRTYNFPQGRVTDHRINFTLYK 328


>gi|33151768|ref|NP_873121.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP]
 gi|33147989|gb|AAP95510.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP]
          Length = 351

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L +E + +  +++ I+   Q  ++ + L  + 
Sbjct: 14  DTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINALIQGIEDVEALIELA 73

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  + +          K  +     + +  +     D   C L+++AG+GG+EA 
Sbjct: 74  VEAEDEQTLYEAQIEADELATKLAK-----LEFQRMFSGPYDATDCYLDLQAGSGGTEAQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I+G   F  ++ E+G+HR+ 
Sbjct: 129 DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLRTETGIHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS A   V PE  +  D++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 189 RKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQHVNKTESAVR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   + +SQHQN+ + MK LRA+LY++E  +   E+      K  IG G  
Sbjct: 249 ITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEENKSDIGWG-- 306

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 307 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|13357561|ref|NP_077833.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|170762199|ref|YP_001752083.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920085|ref|ZP_02690833.2| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508605|ref|ZP_02689678.2| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701604|ref|ZP_02553446.2| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|13124459|sp|Q9PRE0|RF1_UREPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039997|sp|B1AHY9|RF1_UREP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|11277784|pir||D82945 translation releasing factor RF-1 UU003 [imported] - Ureaplasma
           urealyticum
 gi|6898949|gb|AAF30410.1|AE002100_3 peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|168827776|gb|ACA33038.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902439|gb|EDT48728.1| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182676062|gb|EDT87967.1| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700834|gb|EDU19116.1| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 359

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 155/362 (42%), Positives = 227/362 (62%), Gaps = 14/362 (3%)

Query: 3   FLSHKQICDLKNRFA--------EIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQ 54
              +K++ +   R A        E+E  +++        ++  +    + I    + Y Q
Sbjct: 1   MEYNKKLYEAIERVAIKNDALKKELETVVTD---FKKIKEINIQLKKTTKIAEAFAKYKQ 57

Query: 55  KKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
           K         ++     D E+ +LAQ+++   +  I  +EN++  +LLP D +DDK+ I+
Sbjct: 58  KLDTGIAAEKILN-TEKDLELIELAQMDLDEAKINIPIIENDLKIMLLPTDPNDDKNVIV 116

Query: 115 EIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFS 174
           E+R   GG E+++FVG+LF  Y  YA    WK++++  + N   G+  I   ISG  V+S
Sbjct: 117 EMRPAAGGDESSIFVGNLFDTYRAYAENNNWKMKIIEMTPNAV-GFSFISFMISGEEVYS 175

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
           RMKFESGVHRVQRVPATE+ GRVHTS  TVAVLPE  E+DV I   ++RIDT RASG+GG
Sbjct: 176 RMKFESGVHRVQRVPATESKGRVHTSTITVAVLPEQDEVDVVINPTELRIDTYRASGAGG 235

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVN T+SAVRITHIPTG++      KSQ +NR  AMK+LRA+L++  +++   E +  R
Sbjct: 236 QHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEFANLR 295

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           K Q+G+GDRSE+IRTYN+ Q R+TDHRINLTL KL+ ++ G +D+II+ L+   Q  ++ 
Sbjct: 296 KNQVGTGDRSEKIRTYNYPQNRVTDHRINLTLNKLDQIMMGELDEIIDALIADEQTGLMA 355

Query: 354 SA 355
           + 
Sbjct: 356 NL 357


>gi|319787302|ref|YP_004146777.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
 gi|317465814|gb|ADV27546.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
          Length = 375

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 171/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +      D       L  E A +   +  I+   +  +   +L  + 
Sbjct: 28  DAKKERLEEVNRELELPNVWDDPERAQALGRERALLEKTVGGIASVLEGLEGSTELLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D E  +    +V   EK I  LE +           D  +  ++I+AG GG+EA 
Sbjct: 88  -ESEQDEETAEAVVADVDRFEKHIEALEFQRM----FSGQMDGANAFVDIQAGAGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   R WK E+L  S  D  G K     + G   +  +K E+GVHR+ 
Sbjct: 143 DWAEMLLRMYLRWCESRGWKTELLEVSGGDVAGIKSATFRVEGDFAYGWLKTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS  +V V PE   +ID++I   D++ D  R+SG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSDNRRHTSFTSVFVSPEVDDKIDIEINPADLKTDVYRSSGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+P+GI+V   +E+SQH NR RAMK+L A+LY++E ++   E+ A    K  IG G  
Sbjct: 263 ITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYELEIQKRNAEKDAVEATKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR Y   Q RI D R  +     + VL G +D+ +   L A
Sbjct: 321 -SQIRNYVLDQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
 gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
          Length = 349

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               ++  ++   + +    +   K   L  E  ++  ++  +S       +  +L  + 
Sbjct: 12  AAKSDKLEQVNAELEDPAVWNDPKKAQELGREKKSLENVVLSLSHIKSALTDAGELFEMA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  ++ +        ++  +     + +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 72  KEEQDDETLKAVEADVSELQDRIEK-----LEFRRMFSNPMDPCNCFVDIQAGAGGTEAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + R Y RY   + +   +L  SD +  G K     + G   +  ++ E+GVHR+ 
Sbjct: 127 DWASMILRQYLRYCERKGFNATILEQSDGEIAGIKTATIKVEGDYAYGYLRTETGVHRLV 186

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++   HTS  ++ V PE    I++DI   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 187 RKSPFDSANGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V   +++SQH+NR  A ++L++RLY++E ++   E+    + K  +G G  
Sbjct: 247 LTHIPTGIVVQCQNDRSQHRNRADAWEMLKSRLYELELRKRMAEQQKLEDSKTDVGWG-- 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R +      + VL G +DD I   L  
Sbjct: 305 -HQIRSYVLDSSRIKDLRTSHETGNTKAVLDGDLDDFIIESLKQ 347


>gi|294155813|ref|YP_003560197.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145]
 gi|291600475|gb|ADE19971.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145]
          Length = 358

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 152/361 (42%), Positives = 231/361 (63%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    +K + ++KN++ E++  +++   ++    Y K+ +E  +I  I+   + Y   +Q
Sbjct: 1   MEQTMYKSLTNIKNKYNEMQEMLNDPNVINDIKKYTKINKELNSIEEIVKCFNHYLNAEQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +    ++ +   D E+ +LA+IE+   E+ + +L  E+  L+LPKD +DDK  I+EIR
Sbjct: 61  NFKSSKEMLSEK--DEEMVELAKIEITQSEEIMTKLTEELKILILPKDKNDDKDVIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +F GDLFRMY++++     K++VL  +  + GG+  I  +I G   +S++K
Sbjct: 119 GAAGGDEANIFAGDLFRMYQKWSDQNDMKLKVLDENRAEAGGFTLITFSILGDKAYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQR+P TE  GRVHTS ATV V+PE  +  ++++  EDIRID  R+SG+GGQ 
Sbjct: 179 FESGVHRVQRIPVTETKGRVHTSTATVTVMPEIDDDIEIEVKSEDIRIDVFRSSGNGGQS 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH  +GI+V     KSQ QN+  AM++L+++LYD+E K+   E S  RKL
Sbjct: 239 VNTTDSAVRITHASSGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELKKKEEEESGYRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             GSG RSE+IRTYN+ Q R+TDHRI+ +   L  V++G ++ II+ LL   Q + +  A
Sbjct: 299 A-GSGFRSEKIRTYNYPQDRVTDHRISYSTS-LSPVMEGKLNSIIDALLAMEQDEKLKEA 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|148377997|ref|YP_001256873.1| peptide chain release factor 1 [Mycoplasma agalactiae PG2]
 gi|238686692|sp|A5IZH6|RF1_MYCAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148292043|emb|CAL59435.1| Peptide chain release factor 1 [Mycoplasma agalactiae PG2]
          Length = 358

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 142/361 (39%), Positives = 225/361 (62%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M     K + ++K  + E+  ++ +   +    +   + +E A I  I  K   Y+   +
Sbjct: 1   MEKTMFKSLSEIKQSYLELLKKIDDPEVISNIKEYSAINKEIAKIREISEKFITYENILK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++   N +    + A++ +     ++ ELE ++  L+LP+D +DDK+ I+EIR
Sbjct: 61  DVEQAKIMLESKNEEE--VEFAKMIIDENSLKLDELEEKLKILILPQDENDDKNIIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +F GDLFRMY ++A    +++++LS++    GG+ +IV +I G   +S+ K
Sbjct: 119 GAAGGDEANIFAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GR+HTS  TV V+PE  +  +++I   D++ID  R+SG+GGQ 
Sbjct: 179 FESGVHRVQRVPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQS 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PT I+V +  E+SQ  NR  A+ +L+++LYD+E ++ A E S  RKL
Sbjct: 239 VNTTDSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             G GDRSE+IRTYN+ Q R+TDHRI+ +   L+ +++G +  II+ LL   Q + I  +
Sbjct: 299 A-GHGDRSEKIRTYNYPQDRVTDHRISFSTS-LKPIMEGKLTPIIDALLAEEQNQKIKES 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|311740614|ref|ZP_07714441.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304134|gb|EFQ80210.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 362

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 150/369 (40%), Positives = 216/369 (58%), Gaps = 20/369 (5%)

Query: 1   MVFLSHKQI---CDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQ 54
           M  +   Q+    D+ + +  IE++M++         + KL++ YA + PII       Q
Sbjct: 1   MKKIMSNQVSLVDDIVSEYQGIEMQMADPEVAGDQKQFRKLSKRYAELRPIIMVNDELTQ 60

Query: 55  KKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
            +++  D   +  + +   E  D        +EK +  LE ++  LL P+D  D +  I+
Sbjct: 61  AREDLADAKEMAYEDHDFQEEAD-------RLEKSVESLEEKLADLLAPRDEQDSEDIIM 113

Query: 115 EIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG--- 171
           EI+AG GG EAALF GDL RMYERYA    +  EVL  +++D GG K++  +   +    
Sbjct: 114 EIKAGAGGEEAALFAGDLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSR 173

Query: 172 --VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMR 228
              +S  KFE GVHRVQRVP TE+ GR+ TSAA V V PE  E++  +I  +DIR+D  R
Sbjct: 174 DGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYR 233

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           +SG GGQ VNTTDSAVRITH+PTG++V    E+SQ QN+ RA++VL+ARL  +ER+    
Sbjct: 234 SSGKGGQGVNTTDSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREA 293

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           E    R  Q+ + DRSERIRTYN+ + RITDHRI      L+ VL G ++D+I  L    
Sbjct: 294 EAGEQRASQVRTMDRSERIRTYNWPENRITDHRIGYKANNLDSVLNGDMNDLIKALQDQE 353

Query: 348 QAKMIGSAS 356
           +A+ + +  
Sbjct: 354 RAERLEAEG 362


>gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
 gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
 gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 332

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 105/337 (31%), Positives = 172/337 (51%), Gaps = 15/337 (4%)

Query: 17  AEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   + +       D    L +E +A+  ++  +    Q  ++   L  +  +   + 
Sbjct: 2   QEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDED 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
              +         +K        + +  +     D   C ++I+AG+GG+EA  +   L 
Sbjct: 62  TFNEAVAELDGLDKKLGE-----LEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLL 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A  + +K E++  SD +  G K     I G   F  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
            GR HTS ++V + PE    ID++I   D+RID  RASG+GGQHVN T+SAVRITH+PT 
Sbjct: 177 GGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSERIRTY 309
           I+V   +++SQH+N+ +A K LRA+LY+ E ++   ++  + + K  IG G    +IR+Y
Sbjct: 237 IVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                RI D R ++     + VL G +D  I   L A
Sbjct: 294 VLDDSRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 330


>gi|238810252|dbj|BAH70042.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 373

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 228/353 (64%), Gaps = 9/353 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+KN +  +  ++ +   ++    Y K+++E   I  I    + Y   + +  D   +
Sbjct: 24  LSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 83

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I   N +  +   A+  +   E ++ +LE E+  L+LPKD +DDK+ I+EIR   GG EA
Sbjct: 84  INSKNEEEVL--FAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGDEA 141

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +F GDLF+MY ++A    +K++V+SSS    GG+ +IV +I G   +S++KFESGVHRV
Sbjct: 142 NIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHRV 201

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVP TE++GR+HTS ATV V+PE  +  D++I  +D++IDT R+SG+GGQ VNTTDSAV
Sbjct: 202 QRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSAV 261

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V+   E+SQ  NR  A+ VL+++LYD+E ++   E +  RKL  G GDRS
Sbjct: 262 RITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLA-GHGDRS 320

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+ Q R+TDHRI  +   L+ V++G +  II  LLT  Q + I  + 
Sbjct: 321 EKIRTYNYPQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQNQKIKESG 372


>gi|86742401|ref|YP_482801.1| peptide chain release factor 1 [Frankia sp. CcI3]
 gi|119361540|sp|Q2J6M0|RF1_FRASC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86569263|gb|ABD13072.1| bacterial peptide chain release factor 1 (bRF-1) [Frankia sp. CcI3]
          Length = 357

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 210/342 (61%), Gaps = 18/342 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L    AEIE ++++    +   K   L+  YA ++P++      D+ +    DL   
Sbjct: 5   LDGLIAEHAEIEGQLADPAVHNDPAKARALSRRYAQLAPVVDLARELDRVEG---DLAAA 61

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D   RD  Q     + +    L       L+P D DD +  ILE++AG GG E+
Sbjct: 62  RELALLDPSFRDEVQDLGEELARLNDRLRAY----LVPIDPDDARDAILEVKAGAGGEES 117

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF GDL RMY RYA  R WK E+L ++ +D GGY+++   +        G GV+ R++F
Sbjct: 118 ALFAGDLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAVKARGPAGPGDGVYGRLRF 177

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E GVHRVQRVP TE++GR+HTSAA V VLPEA E+DV+I   D+RID  R+SG GGQ VN
Sbjct: 178 EGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAEEVDVEIDPNDLRIDVFRSSGPGGQSVN 237

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITHIPTG++V   +EKSQ QN+  A+++LRARL    R++  +E S  R  Q+
Sbjct: 238 TTDSAVRITHIPTGVVVSCQNEKSQLQNKESALRILRARLLGAAREKAESEASLARASQV 297

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
            + DRSER+RTYNF++ RI+DHR+    + L+ VL G +D++
Sbjct: 298 RTVDRSERVRTYNFAENRISDHRVGYKAHNLDQVLDGELDEV 339


>gi|40062727|gb|AAR37632.1| peptide chain release factor 1, degenerate [uncultured marine
           bacterium 438]
          Length = 358

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +  K I DL ++ + +E  +S        + + ++EY+ ++ +I     Y   + E++D
Sbjct: 1   MIPLKTIEDLISKHSILEKELSSGEVDKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++ D +SD+E +++A++E+  ++ E   +E ++   LLPKD  D K+ I+EIRAGTG
Sbjct: 61  LEKILSDSSSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA+LF  DLF+MYE+ +  +KW++E++S S ++ GG KE++A+I G+ ++S +K+ESG
Sbjct: 121 GLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESG 180

Query: 182 VHRVQRVPATEASGRVHTSAAT-VAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
                +      S    T      AVLPEA E+D+ I   D+RID  RA G GGQ VNTT
Sbjct: 181 SSSCSKSSRYRNSREEFTLLQQQWAVLPEAEEVDIKINDSDLRIDVFRAGGPGGQSVNTT 240

Query: 241 DSAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITHIPTG+ V+   +KSQH+N+ + M +LR+RLY++ER R+  ERS +RK +IG+
Sbjct: 241 DSAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGERSEDRKSKIGT 300

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GDRSERIRTYNF QGR+TDHRINLTL+KLE  L+G   D+++  L    Q + + + +
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINLTLHKLEAFLEGEAFDEMVESLTLQAQEEKLSNLN 358


>gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259585217|sp|C4LJM5|RF1_CORK4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237758780|gb|ACR18030.1| peptide chain release factor RF-1 [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 357

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 139/356 (39%), Positives = 210/356 (58%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  +E ++++    +      K+ + ++ + PII      +    + +    +
Sbjct: 8   VDDIVSEYQGLEAQLADPDLHNDAARARKVGKRFSELQPIIQTNDRLNAVTDDLEAAEEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +   D E    A+      E+   +L +    LL P+D  D    ++E+++G GG EA
Sbjct: 68  AHE---DQEFAAEAERLREEKEELSDKLAD----LLAPRDPHDGDDIVMEVKSGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF G+L RMY+RYA    + ++VL  +  D GG K+I  +I  +       +S  KFE 
Sbjct: 121 ALFAGELVRMYQRYADKHGFAIDVLDDAPTDLGGIKDITMSIRSKKPSRDGAWSVFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  EI+  +I  +DIR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEIEDVEIDDKDIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QN+ RAM+VL ARL  ++ +      SA+R  Q+ 
Sbjct: 241 TDSAVRITHLPTGLIVTCQKERSQIQNKARAMQVLAARLQQMKEEEAEAAASADRAAQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + RI+DHRIN   + L+ VL G +DD+ + L +A +A+ + +
Sbjct: 301 TMDRSERIRTYNFPENRISDHRINYKAHNLDQVLDGDLDDLFSALQSAERAERLEA 356


>gi|242069313|ref|XP_002449933.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
 gi|241935776|gb|EES08921.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
          Length = 412

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 133/353 (37%), Positives = 220/353 (62%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +R+++   V     Y KL +  + +  +++    +   +++ ++   
Sbjct: 53  KLDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVSELDQVVTTYRQFKDCERQLEETKA 112

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  ++  D ++ ++   E+ A+  ++ ELE ++  LLLP D  D ++ +LE+RAG GG E
Sbjct: 113 LEKENEDDPDMSEMITSELEALSNQLAELEEKLKLLLLPSDPLDSRNILLEVRAGAGGDE 172

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMY++Y     WK + +S S+ D GGYK  V  + G+ V+S++KFESGVHR
Sbjct: 173 AGIWAGDLVRMYQKYCERNNWKFKPVSCSEADMGGYKTYVMEVKGKQVYSKLKFESGVHR 232

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTS ATVA++PEA E+DV I  +DI + T R+ G+GGQ+VN  ++AV
Sbjct: 233 VQRVPLTETMGRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAV 292

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QN+ RA ++LRA+LY+++ +         RK+Q+G+G RS
Sbjct: 293 DLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQESIRNQRKMQVGTGARS 352

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R+TDHR+ +  Y+L   L G I+  +    T  Q +++   +
Sbjct: 353 EKIRTYNYKDNRVTDHRLKMN-YELTGFLLGDIESAVQSCATLEQQELLEEMA 404


>gi|145348023|ref|XP_001418457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578686|gb|ABO96750.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 373

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 161/356 (45%), Positives = 231/356 (64%), Gaps = 6/356 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            ++      R  E+   +S     +D  ++  +E + I PI  +  +  + + E+  L  
Sbjct: 18  EERGEAALRRREELIALISRQGVDIDRVVEANKELSRIEPIAEQYEVVKKLRAEKASLEE 77

Query: 65  VIGDHN---SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           ++ D +      E+ +LA+ E+ A++ ++ + E  +  L LP D  DD+  ILE+RAG G
Sbjct: 78  LVRDASSGGDSKELAELAREELRAVDIDLPDQELALQLLFLPHDDADDRGAILEVRAGAG 137

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  +LFRMY  +A    W+ + L+ S+ D  G +E  A I G+GVF R+KFESG
Sbjct: 138 GDEAALFAAELFRMYALHARKSGWRFDTLNVSETDGKGVREASAEILGKGVFGRLKFESG 197

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE  GRVHTS A++AVLP A E+++DI  ED+RIDTMRASG+GGQHVNTT+
Sbjct: 198 VHRVQRVPETETQGRVHTSTASIAVLPHAEEVEMDIKEEDVRIDTMRASGAGGQHVNTTN 257

Query: 242 SAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTG  +V   E+SQH+N+ +A  VL+ARLYD+ER++MA ERS  R   IG+G
Sbjct: 258 SAVRLTHAPTGIQVVIQDERSQHKNKAKAFSVLKARLYDLEREKMAKERSELRSSLIGTG 317

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           DRSERIRTYNF+QGR+ DHR+  T+  +  ++ G+ +D+I   L      +++  A
Sbjct: 318 DRSERIRTYNFAQGRVKDHRVEGTISDVNALMDGFLLDEITEKLKRKRVEELLAGA 373


>gi|93005664|ref|YP_580101.1| peptide chain release factor 2 [Psychrobacter cryohalolentis K5]
 gi|92393342|gb|ABE74617.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
           cryohalolentis K5]
          Length = 349

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+ L +      +      K+ +E + +  +I  +   +   ++   +  + 
Sbjct: 12  DGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDASAMLELA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +S + D+      A      +   ++ +  +     D  +C L+I++G+GG+EA 
Sbjct: 72  VEAEDESLLADVQ-----AELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    +KVEV+  S     G K     I G   F  ++ E GVHR+ 
Sbjct: 127 DWAEMLLRMYTRWAEAHGFKVEVIEVSSGSVAGIKSATIEIKGNYAFGWLRTEIGVHRLV 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++   HTS A V V PE  +  ++DI   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 187 RKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH P+G++V   +E+SQH N+  AMK+LRA+LY++E ++    + A    K  +G G  
Sbjct: 247 ITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWG-- 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +  +    VL G +D  I   L A
Sbjct: 305 -SQIRSYVLDDSRIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347


>gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12]
 gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12]
          Length = 367

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 175/343 (51%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               +R  E+   + +    +      +L  E  ++  ++  +        +  +L  + 
Sbjct: 30  DAKASRLMEVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMS 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D+    +      +  +        + +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  REEGDDATCEAIEADVEKSAAEVEA-----LEFRRMFSNPLDPSNCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EV+  ++ D  G +     + G   + +++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A+V V PE  +  ++DI   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH+PTGI+V   +++SQH+NR  A ++LR+RLY+ E ++   E+    + K  +G G  
Sbjct: 265 LTHMPTGIVVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKSDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y   Q RI D R N+ +   + VL G +D+ I   L 
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDEFITASLK 364


>gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 342

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 168/344 (48%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +   K   L +E   +  ++  ++       +  +L+ + 
Sbjct: 5   DAKAERLRTVNASLEDPSVWNDPKKAQELGKEKKMLDGVVVTLNDLTSNLSDNTELYEMS 64

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D E     + E   + + +  LE    +  +  +  D   C L+I+AG GG+EA 
Sbjct: 65  KEE-GDEESLLTIETETAKLTEIVEGLE----FRRMFNNPADPLPCFLDIQAGAGGTEAC 119

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +YA  + +   V   +D D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 120 DWASMLLRQYLKYAERKGFTANVEDLTDGDTAGIKSATIKIDGEYAFGHLRTETGVHRLV 179

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A+V V PE  +  ++DI   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 180 RKSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVR 239

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V     +SQH NR  A K LR+RLYD E ++   E+    + K  +G G  
Sbjct: 240 LTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFELRKRQEEQQKLEDTKTDVGWG-- 297

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 298 -HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIQASLKQ 340


>gi|308048394|ref|YP_003911960.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
           balearica DSM 9799]
 gi|307630584|gb|ADN74886.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
           balearica DSM 9799]
          Length = 365

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 179/343 (52%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +    +      +L  E + +  ++  I+  DQ  ++ ++L  + 
Sbjct: 28  DAKQERLEEVNAELEQPDVWNEPERAQELGRERSNLEAVVKTINDLDQGLEDVRELLDLA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                  E  + +  E  A  + +     ++ +  +     D     L+++AG+GG+EA 
Sbjct: 88  V-----EEQDEESFEEAKAELEGLEAQLEKLEFRRMFSGAQDANDAYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  S+ +  G K     ISG   F  ++ E+GVHR+ 
Sbjct: 143 DWCNILLRMYLRWAEAKGFKAEIIEVSEGEVAGLKSATVKISGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE    ID++I   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNTTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH+N+ +AMK L+A+L+++E ++   E+  + + K  IG G  
Sbjct: 263 ITHMPTNTVVQCQNERSQHKNKDQAMKQLKAKLFELEMQKQNAEKQAAEDAKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDRFIEASLK 362


>gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104]
 gi|166223570|sp|A0QCW7|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104]
          Length = 357

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 148/340 (43%), Positives = 203/340 (59%), Gaps = 17/340 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + I  L    A++E R+S+     + D   K    +A ++PI+         +++ + 
Sbjct: 4   PVQTIDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLET 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  D +S          EV  +E  + +L+ ++  +L P+D+ D    +LE+++G G
Sbjct: 64  ARELAADDDS-------FTAEVADLESRVAQLDTQLTDMLAPRDSHDADDIVLEVKSGEG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRM 176
           G E+ALF  DL RMY RYA    W V VL    +D GGYK+   +I        GV+SRM
Sbjct: 117 GEESALFAADLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GRVHTSAA V V PE  E  +V I   D+RID  R+SG GGQ
Sbjct: 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQ 236

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTG++V   +E+SQ QN+ RA++VL ARL  +  ++ + E SA+R 
Sbjct: 237 GVNTTDSAVRITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRA 296

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
            QI + DRSERIRTYNF + RITDHRI    + L+ VL G
Sbjct: 297 SQIRTVDRSERIRTYNFPENRITDHRIGFKAHNLDQVLDG 336


>gi|148243244|ref|YP_001228401.1| peptide chain release factor 1 [Synechococcus sp. RCC307]
 gi|166223614|sp|A5GVY9|RF1_SYNR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147851554|emb|CAK29048.1| Peptide chain release factor 1 [Synechococcus sp. RCC307]
          Length = 364

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 217/354 (61%), Gaps = 5/354 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++      F  +E ++++        +L    +E + + P++       Q   E Q   
Sbjct: 8   ERLEATCRTFNALERQLADPSVAADPEQLLTLAKERSRLEPLVLDYQRLQQLHAEHQQAQ 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+  LAQ E+  +  E  +L   +   LLP D  D++S +LEIRAG GG 
Sbjct: 68  QLLKESKGDAELEALAQEELQQLSSEQEQLNQRLKVALLPSDPRDERSVMLEIRAGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA L+ GDL RMYER+A    W+V  +S+S+ + GG+KE++  I G  VFS++K+E+GVH
Sbjct: 128 EACLWAGDLARMYERHAQTCGWQVNPVSASEAELGGFKELILAIRGDAVFSQLKYEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATE+ GRVHTS ATVAV+PEA  +DV I  +D+ I T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATESQGRVHTSTATVAVMPEADPVDVQIDPKDLDISTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QNR RAM++LRA+L   E +  A   S+ R+ Q+GSGDR
Sbjct: 248 VDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLAKEEEEAAAAESSARRAQVGSGDR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SE+IRTYN+   R TDHR+    + LE VL G + D+I     A Q + +   +
Sbjct: 308 SEKIRTYNYKDNRTTDHRLG-KNFPLETVLNGQLSDLIEACTHADQQQKLEELA 360


>gi|226314892|ref|YP_002774788.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
 gi|226097842|dbj|BAH46284.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
          Length = 370

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 183/360 (50%), Gaps = 19/360 (5%)

Query: 2   VFLSHKQICDL---------KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIY 52
           +    K++ D+         + R  E+E RM      D      +  + ++ I S +   
Sbjct: 13  MSSMAKRLADIRGSLDLPVKQERIGELEERMLAPDFWDDNDAAQKTISELNAIKSLVETM 72

Query: 53  DQKKQEEQDLHTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
            +   + +DL  ++       DS +          + K     E      LL  D  D  
Sbjct: 73  AKLDSQYEDLQVMLELVIEEGDSSLIPDLYDSTQELRKSFESFEL----ELLLSDEYDKN 128

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
           + ILE+  G GG+E+  +   L RMY R+   + +KVE L     D+ G K +   I G 
Sbjct: 129 NAILELHPGAGGTESQDWASMLLRMYTRWGDAKGFKVETLDYLPGDEAGVKSVTLLIKGY 188

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRA 229
             +  +K E GVHR+ R+   +ASGR HTS  +  VLPE  + + VDI  ED+++DT R+
Sbjct: 189 NAYGYLKSEKGVHRLVRISPFDASGRRHTSFVSCNVLPEIEDDNVVDIRTEDLKVDTYRS 248

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG+GGQH+NTTDSAVRITH+P+GI+V   +E+SQ +NR RAMK+L ARL++ +R+     
Sbjct: 249 SGAGGQHINTTDSAVRITHLPSGIVVTCQTERSQIKNRERAMKMLTARLFEKKREEQEKT 308

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +A +  Q        +IR+Y F     + DHR N+ +  ++ V+ G ID  I+  L A 
Sbjct: 309 LAAIQGEQ-KDIAWGSQIRSYVFHPYSLVKDHRTNMEVGNVQAVMDGEIDSFIDAYLRAQ 367


>gi|71153099|sp|Q7VNG1|RF2_HAEDU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +       L +E + +  +++ I+   Q  ++ + L  + 
Sbjct: 28  DTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINALIQGIEDVEALIELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  + +          K  +     + +  +     D   C L+++AG+GG+EA 
Sbjct: 88  VEAEDEQTLYEAQIEADELATKLAK-----LEFQRMFSGPYDATDCYLDLQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD D  G K     I+G   F  ++ E+G+HR+ 
Sbjct: 143 DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLRTETGIHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS A   V PE  +  D++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   + +SQHQN+ + MK LRA+LY++E  +   E+      K  IG G  
Sbjct: 263 ITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEENKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|15803427|ref|NP_289460.1| peptide chain release factor 2 [Escherichia coli O157:H7 EDL933]
 gi|12517417|gb|AAG58019.1|AE005519_5 peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           EDL933]
          Length = 365

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSXSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|37523990|ref|NP_927367.1| peptide chain release factor 1 [Gloeobacter violaceus PCC 7421]
 gi|46576716|sp|Q7ND15|RF1_GLOVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|35214996|dbj|BAC92362.1| translation releasing factor RF-1 [Gloeobacter violaceus PCC 7421]
          Length = 364

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 146/357 (40%), Positives = 224/357 (62%), Gaps = 6/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEE---YAAISPIISKISIYDQKKQEEQ 60
           L  +++ D++  + ++  R+ +        ++       A +   +     + +   E  
Sbjct: 6   LMVQKLNDIERTYNDLTTRLGDPSLASNPQEMLRIVRMRAGLERTVEAYDHWQRLCAERN 65

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            +  +I D   D E+R+LA+ E   +E+ I  LE+EI  LLLP+D +DDK+ +LEIRAGT
Sbjct: 66  AVRQMIRDE-QDPELRELAEEEHTGLEERIARLEDEITLLLLPRDPNDDKNVMLEIRAGT 124

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+F GDL RMY RYA  + W V++ S S  + GG+KE++  I G  V+S++KFE+
Sbjct: 125 GGDEAAIFAGDLMRMYIRYAEGQGWSVKLASESPAEMGGFKEVILEIRGESVYSKLKFEA 184

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE  GRVHTS ATVA++PE  E+DV+I   DI I T R+ G+GGQ+VN  
Sbjct: 185 GVHRVQRVPVTETQGRVHTSTATVAIMPEVEEVDVEINPNDIEITTTRSGGAGGQNVNKV 244

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AV + H P+GI +    E+SQ QN+ RAM++LR +LYD++++    + S  R+ Q+G+
Sbjct: 245 ETAVHLVHKPSGIHIHCQEERSQLQNKARAMQILRVKLYDIKQREQHEQVSGLRRSQVGT 304

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           GDRSE+IRTYN+   R+TDHR++     L   ++G I+ +I   + A Q + +   +
Sbjct: 305 GDRSEKIRTYNYKDNRVTDHRLSQNFT-LNTAIEGEIETLIQSAIAAAQREQLAELA 360


>gi|284008432|emb|CBA74885.1| peptide chain release factor 2 [Arsenophonus nasoniae]
          Length = 332

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 104/337 (30%), Positives = 174/337 (51%), Gaps = 15/337 (4%)

Query: 17  AEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   + +    +       L +E +++  I+  I    Q   +   L  +  + + + 
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDALIQGLDDVSGLLDLAIEADDED 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
              +       A   ++     ++ +  +     D  +C L+++AG+GG+EA  +   L 
Sbjct: 62  TFHEAV-----AELAQLEGKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQDWASMLM 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A  + +K E++ +SD D  G K     I G   +  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWAESKGFKTEIIEASDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
            GR HTS ++  + PE   +ID++I   D+RID  RASG+GGQHVN T+SAVRITHIPTG
Sbjct: 177 GGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTG 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTY 309
           I+    +++SQH+N+ +A K L+A+LY++E ++   ++      K  IG G    +IR+Y
Sbjct: 237 IVTQCQNDRSQHKNKDQAFKQLKAKLYELEMQKKNADKQALEENKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                RI D R  +     + VL G +D  I   L A
Sbjct: 294 VLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 330


>gi|312109506|ref|YP_003987822.1| peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
 gi|311214607|gb|ADP73211.1| Peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
          Length = 367

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 180/346 (52%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHT 64
            +   + R  E+E +M+E    D              +  ++ +    +++ +  +  + 
Sbjct: 26  DLEAKQARIRELEEQMAEPDFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYE 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I +   +   ++L        +             LL  +  D  + ILE+  G GG+E
Sbjct: 86  LIKEEPDEDLQQELVTEAKRLTKDFSE-----FELQLLLNEPYDKNNAILELHPGAGGTE 140

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE L     ++ G K +   I G   +  +K E GVHR
Sbjct: 141 SQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHR 200

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +ASGR HTS  +  V+PE  +  +++I  E+IRIDT R+SG+GGQHVNTTDSA
Sbjct: 201 LVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQHVNTTDSA 260

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VRITHIPTGI+V   SE+SQ +NR +A+ +L+A+LY  + +    E +  R  Q  IG G
Sbjct: 261 VRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWG 320

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +   +IR+Y F     + DHR N+ +  ++ V+ G ID  I+  L 
Sbjct: 321 N---QIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLR 363


>gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
          Length = 388

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 203/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   +   I +++ R  EIE++++    +       +L + +A +  ++S     DQ   
Sbjct: 28  MSESAQHAIDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNA 87

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  +      +++  ++            E     LL P D  D +  ++EI 
Sbjct: 88  DIEAAEDLANE--DPVFVQEAERLRGQLDLARTELTE-----LLAPSDPLDQEDALVEIH 140

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 141 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYG 200

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   DIR+D  R+SG GG
Sbjct: 201 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPADIRVDVYRSSGPGG 260

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 261 QGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 320

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + ++++ L      + + 
Sbjct: 321 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADEVRRRMA 380

Query: 354 SASE 357
             SE
Sbjct: 381 QQSE 384


>gi|219119372|ref|XP_002180448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407921|gb|EEC47856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 358

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 137/354 (38%), Positives = 222/354 (62%), Gaps = 5/354 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++  +  +  R+++   ++      ++  + + I  ++     Y   ++E      
Sbjct: 4   RLDGIRRSYQALTERLADPDVINDSNLLRQVMTDRSQIEEVVMVFEEYVALQEELSGAKE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   D +++++A+ E+ AIE ++  LE +I  LLLPKD +D ++ +LEIRAGTGGSE
Sbjct: 64  LFQDAGDDPDMKEMARDEMKAIEPQLDSLEEKIKVLLLPKDPNDARNVMLEIRAGTGGSE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A +F GDL  +Y +Y + + W+  ++ SS  DDGGYK +V  I G  V+S++K+E+GVHR
Sbjct: 124 ANIFAGDLLDVYRKYISTQGWQSNLIDSSSGDDGGYKNVVLDIKGDMVYSKLKWEAGVHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GRVHTS ATVA++PE  E+D+ I  ++I + TMR+ G+GGQ+VN  ++AV
Sbjct: 184 VQRVPATESQGRVHTSTATVAIMPECDEVDIKIDPKEIEMSTMRSGGAGGQNVNKVETAV 243

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ +N+  AMK+L A+LYD+E ++   E  A R  Q+G+G RS
Sbjct: 244 DLLHKPTGIRIKCTQERSQLKNKELAMKMLMAKLYDMENEKREMEERARRGSQVGTGGRS 303

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R +DHR+    + L   L G I  + + ++   Q + +   SE
Sbjct: 304 EKIRTYNWKDSRCSDHRLG-QNFPLAQFLSGDIGSMHDSMIAKDQEERLKGLSE 356


>gi|329945388|ref|ZP_08293151.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328529010|gb|EGF55941.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 364

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 145/359 (40%), Positives = 202/359 (56%), Gaps = 18/359 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVDA--YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
             L   +A+IE  M+   + D     +L   YA +  +++    +     +  D   +  
Sbjct: 9   EPLLAEYADIEAEMAGPAAADPGAMRRLGRRYAELGRVVAAYRAWQSASTDLADARELAA 68

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +   D +          A       L      +L+P+D DD +  I+E++AG GG E+AL
Sbjct: 69  E---DEDFAAEVPTLEAAEAAAGEHL----REVLVPRDPDDARDVIIEVKAGEGGEESAL 121

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFES 180
           F  DL RMY RYA  + W VEVL ++D+D GGYK++   I          GV++ +K+E 
Sbjct: 122 FASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAIKTRGPVEPQNGVWAHLKYEG 181

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+HTSAA V V+PEA +     I   D+RID  R+SG GGQ VNT
Sbjct: 182 GVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNT 241

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V+  +EKSQ QN+  AM+VLRARL       +A E +  R+ Q+ 
Sbjct: 242 TDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLLAERAAAVAAEAAQARRSQVR 301

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I   +   +A+ +    E
Sbjct: 302 TVDRSERIRTYNFPENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMDEAERLSQVGE 360


>gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 365

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 119/350 (34%), Positives = 182/350 (52%), Gaps = 12/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
             +   I  LK   AEI+ +M+E    +   K   L+++   +  +IS+    ++  ++ 
Sbjct: 19  MGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYESIEKLCEDL 78

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  +  +   +S  +++ +      +K             L     D  + IL I AG
Sbjct: 79  NALIELGIEEGDESLSQEVHEEYKSLSKKINDM-----KIKTLLSGPYDRNNAILSIHAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+EA  +   L RMY R+A+ + ++VE +     DD G K +   + G   +  +K E
Sbjct: 134 AGGTEAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMVKGAFAYGYLKGE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVN 238
           +GVHR+ R+   +A+GR HTS A V VLPE  +   VDI  ED++IDT R+SG+GGQHVN
Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVN 253

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T+SA+RITHIPTGI+V   SE+SQ QNR  AMK+L+A+L D+  K    +     K + 
Sbjct: 254 KTESAIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDL-KGEH 312

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                  +IR+Y F     + DHR N  +  +  V+ G ID+ IN  L  
Sbjct: 313 KEAGWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQ 362


>gi|283788451|ref|YP_003368316.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
           ICC168]
 gi|282951905|emb|CBG91623.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
           ICC168]
          Length = 365

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  I+  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMAQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +      +     + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAVAELDM-----LEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|148260023|ref|YP_001234150.1| peptide chain release factor 1 [Acidiphilium cryptum JF-5]
 gi|166223523|sp|A5FX99|RF1_ACICJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146401704|gb|ABQ30231.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
           cryptum JF-5]
          Length = 352

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 168/347 (48%), Positives = 233/347 (67%), Gaps = 5/347 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
               +++  +  R  E+   ++     + ++  + E A I P+  +I +    ++     
Sbjct: 1   MTLEQKLDRIVLRAEELRAMLAAGVDGERFVAASRELAEIEPVEQQILLLRAAERA---- 56

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
                   +D E+R+LA  E+ ++ + +  LE+EI   LLP+D  D++  ILEIR   GG
Sbjct: 57  RDEAEAARADPELRELADAELDSLRETLPRLEHEIRLALLPRDAADERPAILEIRPAAGG 116

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EAALF  +LF  Y RYA LR W+ E+L  ++ + GG +E +A I+GR VF+R+KFESGV
Sbjct: 117 DEAALFAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAEITGRAVFARLKFESGV 176

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVPATE  GR+HTS  TVAVLPEA ++DV++   D+RID  RASG+GGQHVN T+S
Sbjct: 177 HRVQRVPATETQGRIHTSTVTVAVLPEAEDVDVEVNEADLRIDVFRASGAGGQHVNKTES 236

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+V    E+SQH+NR +AMK+LRARLY+  R   A  R+A+RK Q+G+GD
Sbjct: 237 AVRITHLPTGIVVAMQEERSQHKNRAKAMKILRARLYEQTRAAAAAGRAADRKSQVGTGD 296

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           RSERIRTYNF QGR+TDHRINLTL+K++ V+ G  D+II+ L    Q
Sbjct: 297 RSERIRTYNFPQGRVTDHRINLTLHKIDRVMLGEFDEIIDALTEEDQ 343


>gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum
           3TCK]
 gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum
           3TCK]
          Length = 353

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 171/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K +  E+   + +    +       L +  AA+  ++  I   D   ++   L  + 
Sbjct: 16  DAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGVEDVAGLLELA 75

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +      ++          E+     ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 76  VEEDDQETFDEIEPE-----LAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSGGTEAQ 130

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+A  + +K E++  S  D  G K     + G   +  ++ E+GVHR+ 
Sbjct: 131 DWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETGVHRLV 190

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  V PE  +   +DI   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 191 RKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVR 250

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+N+ +AMK L+A+L++ E ++   E+    + K  IG G  
Sbjct: 251 ITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKQNAEKQANEDSKSDIGWG-- 308

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 309 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|887841|gb|AAA83072.1| peptide chain release factor 2 (RF-2) [Escherichia coli]
          Length = 365

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR  
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRXV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  R SG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ + MK ++A+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQXMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|38233635|ref|NP_939402.1| peptide chain release factor 1 [Corynebacterium diphtheriae NCTC
           13129]
 gi|81564890|sp|Q6NHU0|RF1_CORDI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|38199895|emb|CAE49561.1| peptide chain release factor 1 (RF-1) [Corynebacterium diphtheriae]
          Length = 356

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 143/362 (39%), Positives = 215/362 (59%), Gaps = 17/362 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
                 + D+ + +  IE +MS+  ++     + KL++ Y+ + PII+  +   Q + + 
Sbjct: 1   MSQVSAVDDIVSEYQGIEAQMSDPETMGDQTLFRKLSKRYSELQPIINVNNKLVQARDDH 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +    +  +    +   +    E+++       LE ++  LL P+D  D    ++E++AG
Sbjct: 61  EAAEEMAYEDKEFAAEAERLAEEIVS-------LEEQLADLLAPRDPHDGDDIVMEVKAG 113

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFS 174
            GG EAALF G+L RMY+RYA    + VEVL  S++D GG K++  +I  +       +S
Sbjct: 114 AGGEEAALFAGELVRMYQRYAEKHGFTVEVLGLSESDLGGVKDMTLSIRSKTPSRDGAWS 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSG 233
             KFE GVHRVQRVP TE+ GR+ TSAA V V PE  E  +V+I  +D+R+D  R+SG G
Sbjct: 174 VFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVEIDDKDLRVDVYRSSGKG 233

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTG++V    E+SQ QN+ RAM+VL ARL  +  ++   E +  
Sbjct: 234 GQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQAMAEEQAEAEAAEG 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           R  QI + DRSERIRTYN+ + RI+DHRI      L+ VL G +DD+ + L  A +A+ +
Sbjct: 294 RAAQIRTMDRSERIRTYNWPENRISDHRIGYKANNLDSVLNGDLDDLFSALQAAERAERL 353

Query: 353 GS 354
            +
Sbjct: 354 EA 355


>gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 354

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 111/352 (31%), Positives = 178/352 (50%), Gaps = 10/352 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M          L    +  E +M+E    D      +     + + +K   +D    E  
Sbjct: 1   MALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL   +   + D +     Q E +    ++++  +     LL     D  + ILEI  G 
Sbjct: 61  DLKVTLELISEDPD--SGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGA 118

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+EA  +   L RMY R+A    +KV+VL     +  G   +   I+G   +  ++ E 
Sbjct: 119 GGTEAQDWGSMLLRMYTRWAETHDFKVDVLDYQVGEVAGINSVSILINGENAYGYLRSEK 178

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHR+ R+   +++GR HTS A+V V+PE   ++ + I  +++++D  RASG+GGQHVN 
Sbjct: 179 GVHRLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNK 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ-- 296
           T SAVRITHIPTGI+V + +++SQ QNR  A+ +L+++LY++E ++ A E++     Q  
Sbjct: 239 TSSAVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLD 298

Query: 297 IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IG G    +IR+Y F     + DHR N     +  V+ G +D  IN  L   
Sbjct: 299 IGWG---SQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347


>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
 gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
          Length = 373

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 187/349 (53%), Gaps = 12/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +  +K R +EIE  M+     +   K   L+ E   +   +      +QK ++ + L  
Sbjct: 27  DLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQELEAFKSVEQKIEDSEVLIE 86

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D  + D A+  +  ++K +  LE       +     D  + I+ I AG GG+E
Sbjct: 87  MA-EEEQDGSLLDEAEQMLSDLDKTLDRLEV----KKVLSGEFDKNNAIVTIHAGAGGTE 141

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + ++VE+L   +N++ G K     I G   +  ++ E G HR
Sbjct: 142 SCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIKGPYAYGFLRAEHGTHR 201

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+ R HTS   V V+PE  E  +V+I  ED+RIDT RASG+GGQHVN TDSA
Sbjct: 202 LVRISPFDANARRHTSFCGVIVVPEIDEDIEVEIKEEDLRIDTYRASGAGGQHVNKTDSA 261

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V   SE+SQ QNR RAMK+L+ARLY++ER++   + +  R  +  S   
Sbjct: 262 VRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAQAR-GEHKSIAW 320

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             +IR+Y F   R + DHR  +    ++ V+ G ID  I   L     +
Sbjct: 321 GNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLKQKARE 369


>gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91]
 gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas
           eutropha C91]
          Length = 348

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+E +  +    +      +L  E  ++  I+  +   D++ Q+ Q+L  + 
Sbjct: 11  DAKQVRLTELERQSEDPAIWNDPARAQELGREKKSLENIVFTLRSIDRQLQDAQELLQIA 70

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + D  +  +++      +           +  +  D  D  +C ++I++G+GG+EA 
Sbjct: 71  QEESDDETLHSISEDVAGLAKTVEEM-----EFHRMFSDPMDPNNCFIDIQSGSGGTEAQ 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY  Y   R   VE+L  S  D  G K     +SG   +  ++ E+GVHR+ 
Sbjct: 126 DWASMLERMYLHYCERRGLAVELLEESPGDVAGIKSATIKVSGEYAYGYLRTETGVHRLV 185

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V V PE  +  ++DI   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 186 RKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKTDSAVR 245

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITHIPTGI+V   S +SQH+NR  AM VL++RLY+ E ++     +   + K  I  G  
Sbjct: 246 ITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWG-- 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 304 -HQIRSYVLDQSRIKDLRTNIEVGNTQAVLDGDLDVFIEASLKQ 346


>gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
 gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
          Length = 367

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 169/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +   K   L  E  ++  ++  +        +  +L  + 
Sbjct: 30  DAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRLTNGLSDNSELFEMS 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +       +   +E +I++LE    +  +  +  D  +  ++I+AG GG+EA 
Sbjct: 90  KEE-GDMDGLQSISDDAATLEADIKQLE----FRRMFNNPADPLNAFVDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +YA  + +K ++   +  D  G K     + G   F  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE  +  ++DI   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASIFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V     +SQH NR  A K LR+RLYD E ++   E+    + K  +G G  
Sbjct: 265 LTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|295394649|ref|ZP_06804868.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972542|gb|EFG48398.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 359

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 142/341 (41%), Positives = 200/341 (58%), Gaps = 14/341 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L +    IE  ++            KLT  Y+ +  I       +Q   + +D   +
Sbjct: 12  VRSLLDEHERIEAELANPDVHANAGLARKLTRRYSELDQIAKTYRELNQCLSDVEDAKEL 71

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +  + +E            E+ I  L++++  LL+PKD DD +  I+E++AG GG E+
Sbjct: 72  ASEDPAFAEEAKSL-------EERIEVLQDKLRELLIPKDPDDARDAIIEVKAGEGGDES 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG--VFSRMKFESGVH 183
           ALF GDL RMY+R+A  R W  EVL S++ + GGYK+I   I  R   V+  +KFE GVH
Sbjct: 125 ALFAGDLVRMYQRWADHRGWSTEVLDSTEANLGGYKDITIAIKSREGGVYGWLKFEGGVH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP TE+ GR+HTSAA V V PE     ++ +   D++ID  R+SG GGQ VNTTDS
Sbjct: 185 RVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEIQLDDNDLKIDVYRSSGPGGQSVNTTDS 244

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTGI+    +EKSQ QN+  AM++LRAR+   + +  A E +  R+ Q+ + D
Sbjct: 245 AVRITHLPTGIVASCQNEKSQLQNKEAAMRMLRARILAKQAEEAAAEANDMRRSQVRTVD 304

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINP 342
           RSERIRTYNF + RI DHR     Y L+ VL G +DD++  
Sbjct: 305 RSERIRTYNFPENRIVDHRTGFKAYNLDQVLDGRLDDVVES 345


>gi|224131216|ref|XP_002321029.1| predicted protein [Populus trichocarpa]
 gi|222861802|gb|EEE99344.1| predicted protein [Populus trichocarpa]
          Length = 416

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 131/340 (38%), Positives = 218/340 (64%), Gaps = 5/340 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +++ +   V     Y KL +  A +  ++S    +   ++  +D   
Sbjct: 57  KLESAEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKDCEKMLEDTRA 116

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +  +D ++ ++   E+ ++  E+++LE ++  LLLP D  D ++ +LE+RAGTGG E
Sbjct: 117 LAKEDGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDE 176

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A L+ GDL RMY+RY+    WKV V+SSS+ + GGYK  V  + G+ V+S++K+ESGVHR
Sbjct: 177 AGLWAGDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHR 236

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TEA GRVHTS ATVA++PE  E++V I  ++  + T R+ G+GGQ+VN  ++AV
Sbjct: 237 VQRVPQTEAQGRVHTSTATVAIMPEVDEVEVVIDPKEYELTTARSGGAGGQNVNKVETAV 296

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E++Q QNR RA+++LRA+LY+++ +         RK+Q+G+G R+
Sbjct: 297 DLIHKPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKVREQQESIRNQRKMQVGTGARA 356

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPL 343
           E+IRTYN+   R+TDHR+ +  ++L   L G I++ +   
Sbjct: 357 EKIRTYNYKDNRVTDHRLKVN-FELTSFLAGDIENAVQAC 395


>gi|260879267|ref|ZP_05891622.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
 gi|308089661|gb|EFO39356.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
          Length = 325

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 150/318 (47%), Positives = 212/318 (66%), Gaps = 7/318 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q + 
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLAAAEEMAKE--DDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY +YA  R W++EV+SS++ + GGYKE++A +SG G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+ E  E D  +I   D++IDT RASG+GGQH
Sbjct: 179 FESGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITH+PTG +V    E+SQH+N+ +AM VL AR+   E++R A E S  R+ 
Sbjct: 239 VNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRN 298

Query: 296 QIGSGDRSERIRTYNFSQ 313
            +GSGDRS+RIRTYN+ Q
Sbjct: 299 LLGSGDRSDRIRTYNYPQ 316


>gi|54307774|ref|YP_128794.1| putative peptide chain release factor 2 [Photobacterium profundum
           SS9]
 gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum
           SS9]
          Length = 353

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 171/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K +  E+   + +    +       L +  AA+  ++  I   D   ++   L  + 
Sbjct: 16  DAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGVEDVAGLLELA 75

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +      ++          E+     ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 76  VEEDDQETFDEIEPE-----LAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSGGTEAQ 130

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+A  + +K E++  S  D  G K     + G   +  ++ E+GVHR+ 
Sbjct: 131 DWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETGVHRLV 190

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A+  V PE  +   +DI   D+RID  RASG+GGQHVNTT+SAVR
Sbjct: 191 RKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVR 250

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+N+ +AMK L+A+L++ E ++   E+    + K  IG G  
Sbjct: 251 ITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANEDSKSDIGWG-- 308

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 309 -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|12045113|ref|NP_072924.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|255660257|ref|ZP_05405666.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|1350577|sp|P47500|RF1_MYCGE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1045950|gb|AAC71478.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|166078949|gb|ABY79567.1| peptide chain release factor 1 [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 359

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 144/347 (41%), Positives = 215/347 (61%), Gaps = 4/347 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +  +     ++E  +++       IK + +E     P+I K     +  +   +   ++ 
Sbjct: 11  VEKIVELTEQLEKDLNKPNLSFEQIKVINKELKHKQPLIVKFKELQKLVENANEAEQILN 70

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            ++S  E+ + A+ E+  I+  +  LE EI +LLLP D ++ K+ I+EIR   GG E+ +
Sbjct: 71  -NSSLKELHEEAKKELEKIKASLPSLEEEIKFLLLPVDENNQKNVIVEIRPAAGGDESCI 129

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F+ DLF MY+ Y   + W VE+         G   +   ++G  VF+++KFESGVHRVQR
Sbjct: 130 FLSDLFNMYKNYCTSKNWTVELNEIIPASV-GINFVSFAVNGTDVFAKLKFESGVHRVQR 188

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           VP TEA GRVHTS  TVAVLP+  E+++ I   D+RIDT RASG+GGQHVN T+SAVRIT
Sbjct: 189 VPLTEAKGRVHTSTVTVAVLPQLEEVEITINPSDLRIDTYRASGAGGQHVNRTESAVRIT 248

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V     KSQ  NR +AMK+LRA+L++  + +  + ++  RK Q+GSG+R+E+I
Sbjct: 249 HLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNKQLSTQADLRKSQVGSGERAEKI 308

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           RTYN+ Q RITDHRI LT+ KL  V+ G +D+II  L    + + + 
Sbjct: 309 RTYNYPQNRITDHRIKLTINKLNTVILGDLDEIIEALQADEKKQQLE 355


>gi|115486501|ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group]
 gi|77552370|gb|ABA95167.1| Peptide chain release factor 1, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113645616|dbj|BAF28757.1| Os11g0657100 [Oryza sativa Japonica Group]
 gi|215686469|dbj|BAG87730.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694739|dbj|BAG89930.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186139|gb|EEC68566.1| hypothetical protein OsI_36894 [Oryza sativa Indica Group]
 gi|222616368|gb|EEE52500.1| hypothetical protein OsJ_34701 [Oryza sativa Japonica Group]
          Length = 416

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 133/353 (37%), Positives = 221/353 (62%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +R+++   V     Y KL +  A +  ++S    +   +++ ++   
Sbjct: 57  KLDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYRQFKDCEKQIEETKV 116

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  ++  D ++ ++   E+ ++  ++ ELE ++  LLLP D  D ++ +LE+RAG GG E
Sbjct: 117 LQKENEDDPDMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNILLEVRAGAGGDE 176

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMY++Y     WK + +SSS+ + GG+K  V  + G+ V+S++KFESGVHR
Sbjct: 177 AGIWAGDLVRMYQKYCERNSWKFKPVSSSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHR 236

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTS ATVA++PEA E+DV I  +DI + T R+ G+GGQ+VN  ++AV
Sbjct: 237 VQRVPQTETMGRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAV 296

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QNR RA ++LRA+LY+++ +         RKLQ+G+G RS
Sbjct: 297 DLIHKPTGIRIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQESIRNQRKLQVGTGARS 356

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R+TDHR+ +  ++L   L G I+  +    +  Q +++   +
Sbjct: 357 EKIRTYNYKDNRVTDHRLKMN-FELTGFLMGDIESAVQSCSSMEQKELLEEMA 408


>gi|229827336|ref|ZP_04453405.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC
           49176]
 gi|229788274|gb|EEP24388.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC
           49176]
          Length = 340

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 105/335 (31%), Positives = 171/335 (51%), Gaps = 6/335 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E+   +SE    D   K     A IS + + I  +D+ +    D+  +I     +++
Sbjct: 2   RLEELNRLISEPGFWDNADKANATMAEISSLKNGIESFDELQTMYDDIGALIEMAEEEND 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +++I       +     + +    L     D  + I+ + AG GG+EA  + G L R
Sbjct: 62  SSMVSEIGDELERFKTEF--DTLRISTLLSGPYDKDNAIITLHAGAGGTEACDWTGILMR 119

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
            Y R+A  + +K EV+     ++ G K     I+G   +  +K E GVHR+ R+    A+
Sbjct: 120 AYTRWADSKGFKTEVIDYLAGEEAGVKSCTIEITGTNAYGYLKSEHGVHRLVRISPFNAA 179

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           G+  TS  +  V+P    +ID++I  ED+RIDT RASG+GGQH+N T SA+RITH P+GI
Sbjct: 180 GKRQTSFVSCDVMPDIEEDIDIEIKDEDMRIDTFRASGAGGQHINKTSSAIRITHFPSGI 239

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFS 312
           +V   +E+SQ QN+ +AM++L+A+LY + ++    + +  R  Q        +IR+Y   
Sbjct: 240 VVSCQNERSQFQNKAKAMQMLKAKLYMLRQQENEAKEAGIRGEQ-KDIAWGSQIRSYVLQ 298

Query: 313 QG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               + DHR N+ +   + VL G  D  IN  L  
Sbjct: 299 PYTMVKDHRTNVEIGNAQTVLDGNFDPFINAYLKW 333


>gi|152985089|ref|YP_001346821.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
 gi|150960247|gb|ABR82272.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
          Length = 382

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               +R  E+   + +    +       L  E A ++ ++  +        + +DL  + 
Sbjct: 45  DQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMA 104

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  + D+A       E+    LE  + +  +     D  +  L+I+AG+GG+EA 
Sbjct: 105 VEEGDEGAVGDVAGEV----ERLREILEK-LEFRRMFSGEMDPNNAYLDIQAGSGGTEAQ 159

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    +   ++  S+ +  G K     + G   F  ++ E GVHR+ 
Sbjct: 160 DWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHVKGEYAFGWLRTEIGVHRLV 219

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS   V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 220 RKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVR 279

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH N+  AMK+LRA+LY+ E ++   A++   + K  IG G  
Sbjct: 280 ITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYEQEMQKRTAASQALEDTKSDIGWG-- 337

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R  +     + VL G +D+ +   L  
Sbjct: 338 -HQIRSYVLDQSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 380


>gi|229541533|ref|ZP_04430593.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
 gi|229325953|gb|EEN91628.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
          Length = 327

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 111/333 (33%), Positives = 170/333 (51%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    D   +  +       +  +++     + ++++ +  H +  + N      +L 
Sbjct: 1   MLEPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKEENDSELKEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  EK            LL     D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  AELEAFTEKLNE-----YELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVE L     D+ G K +     G   +  +K E G+HR+ R+   +A+GR HT
Sbjct: 116 GEKKGFKVETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  +V++  ED+R+DT RASG+GGQH+N T SAVRITHIPTGI+V   
Sbjct: 176 SFVSCEVMPEIDDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVSCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ QNR +AMK+L+A+LY  E +    + +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N+    ++ V+ G ID  I+  L AH
Sbjct: 293 MVKDHRTNVETGNVQAVMDGEIDPFIDAYLRAH 325


>gi|227495018|ref|ZP_03925334.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
 gi|226831470|gb|EEH63853.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
          Length = 369

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 142/359 (39%), Positives = 205/359 (57%), Gaps = 20/359 (5%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L   +A++E  +++   +       KL + ++ +S I +          + +    +  +
Sbjct: 14  LLEEYAQVEASLADPEVLADRTQQRKLAKRFSELSVIKNAADALSMAADDLEAAKEMAKE 73

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            +S          E+  +E  +      +  +L+P+D  D  + ILEI+AG GG E+ALF
Sbjct: 74  DSS-------FAAEIPEMEVALEAAHARLVKILIPRDPADADNVILEIKAGEGGEESALF 126

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESG 181
             +L RMY RYA  + WKV+ LSS+    GG KE+  +I          GV++ +KFE G
Sbjct: 127 AAELARMYTRYAETKGWKVKELSSTYTGLGGVKEVSLSIAAKSDVAPEDGVWAHLKFEGG 186

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNT 239
           VHRVQRVP TE+ GR+HTSA  V V PE  +   D  I   D+RID  R+SG GGQ VNT
Sbjct: 187 VHRVQRVPVTESQGRIHTSAVGVLVTPEVEDDTEDLVIDQNDLRIDVFRSSGPGGQSVNT 246

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIPTG++V+  +EKSQ QN+  AM+VLR+RL  +ER++   E SA R  Q+ 
Sbjct: 247 TDSAVRITHIPTGVVVSMQNEKSQLQNKEAAMRVLRSRLIQLEREKKEAEASAMRASQVR 306

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           + DRSERIRTYNF + RI DHR     Y L  VL+G +  +I   +   + + + +A +
Sbjct: 307 TVDRSERIRTYNFPENRIADHRTGYKAYNLATVLEGELGPVIESAIVLEEQRRMEAAGQ 365


>gi|225022790|ref|ZP_03711982.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305682007|ref|ZP_07404811.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
           14266]
 gi|224944397|gb|EEG25606.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305658480|gb|EFM47983.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
           14266]
          Length = 360

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 147/356 (41%), Positives = 213/356 (59%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  IE +MS+  +V     + KL++ Y+ + PI+   +  +Q + +  D   +
Sbjct: 11  VDDIVSEYQGIEAQMSDPETVGDQALFRKLSKRYSELQPIMKVNTALEQARADLADAKEM 70

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +  +   D        +  E+ ELE ++  LL P+D  D    ++EI+AG GG EA
Sbjct: 71  AYEDSEFAPEAD-------RLAGEVVELEEKLADLLAPRDPHDGDDIVMEIKAGAGGEEA 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF G+L RMY+RYA    +  EVL  S++D GG K++  +I  +       +S  KFE 
Sbjct: 124 ALFAGELVRMYQRYADKHGFSTEVLGLSESDLGGVKDMTLSIRSKQPSRDGAWSVFKFEG 183

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  EI   +I  +DIR+D  R+SG GGQ VNT
Sbjct: 184 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEIAAVEIDDKDIRVDVYRSSGKGGQGVNT 243

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V    E+SQ QN+ RA++VL ARL  +  ++   E +  R  QI 
Sbjct: 244 TDSAVRITHLPTGIVVTCQKERSQIQNKARALQVLAARLQALAEEQAEAEAAQGRAAQIR 303

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYN+ + RI+DHRI      L+ VL G ++D+   L TA +A  + +
Sbjct: 304 TLDRSERIRTYNWPENRISDHRIGFKANNLDSVLNGDMEDLFTALRTAERAARLEA 359


>gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 368

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 179/350 (51%), Gaps = 12/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
                 I  +K    EI+  M++    +   K   L +    +  ++ + +   +K ++ 
Sbjct: 19  MGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQKELKELLEEYNSLVRKWEDL 78

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  +  +   +S   ++ +      +K        +    L     D  + IL I AG
Sbjct: 79  TTLIELGLEEGDESITEEVDKEYKELKKKLED-----LKIKTLLNGPYDKNNAILSIHAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           +GG+EA  +   L RMY R+A  + + VE L     ++ G K +   I G   +  +K E
Sbjct: 134 SGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           +GVHR+ R+   +A+GR HTS A V VLPE   +I+V+I  ED+RIDT RASG+GGQ+VN
Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQYVN 253

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T+SAVRITH+PTGI+V   +E+SQ QNR  AMK+L+A+L D+  K    +     K + 
Sbjct: 254 KTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEH 312

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                  +IR+Y F     + DHR N  +  ++ V+ G IDD IN  L  
Sbjct: 313 KEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQ 362


>gi|87300884|ref|ZP_01083726.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
 gi|87284755|gb|EAQ76707.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
          Length = 367

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 145/356 (40%), Positives = 224/356 (62%), Gaps = 5/356 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQ 60
           L  +++      F  +E ++++           +L++E A + P+ + +  +   +++ +
Sbjct: 5   LLRERLEAADRTFQALERQLADPAVAADPSELRRLSKERARLEPLATGLGHWQSLQRQLK 64

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   +      D E+  L Q E+  +  ++  LE ++   LLP D  D++S +LEIRAGT
Sbjct: 65  EAQQLARQSKGDPEMEALIQEELRELGAQLDGLEQQLTLALLPSDPRDERSVMLEIRAGT 124

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAAL+ GDL RMYER+A    W V+ LS+S++D GG+KE++  I G GV+S++K+E+
Sbjct: 125 GGDEAALWAGDLARMYERFAQTVGWSVQPLSASESDLGGFKELILAIRGDGVYSQLKYEA 184

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVPATE+ GRVHTS ATVAV+PEA  ++V +   D+ I T R+ G+GGQ+VN  
Sbjct: 185 GVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQLDPADLDISTARSGGAGGQNVNKV 244

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AV + H PTGI +  + E+SQ QNR RA+++LRA+L + E    A   S+ R+ Q+GS
Sbjct: 245 ETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLERELAEAAAAESSARRAQVGS 304

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           G+RSE+IRTYN    R+TDHR+    + LE VLQG + ++I   + A Q   +   
Sbjct: 305 GERSEKIRTYNAKDNRVTDHRLGRN-FALEPVLQGQLAEVIGACVAAEQKTRLEQL 359


>gi|326771965|ref|ZP_08231250.1| peptide chain release factor 1 [Actinomyces viscosus C505]
 gi|326638098|gb|EGE38999.1| peptide chain release factor 1 [Actinomyces viscosus C505]
          Length = 364

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 146/359 (40%), Positives = 203/359 (56%), Gaps = 18/359 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVDA--YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
             L   +A+IE  M+   + D     +L   YA +  +++    +     +  D   +  
Sbjct: 9   EPLLAEYADIEAEMAGPAAADPGAMRRLGRRYAELGRVVAAYRAWQSASADLADARELAA 68

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +             EV A+E         +  +L+P+D DD +  I+E++AG GG E+AL
Sbjct: 69  EDED-------FAAEVPALEAAEAAAGEHLREVLVPRDPDDSRDVIIEVKAGEGGEESAL 121

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFES 180
           F  DL RMY RYA  + W VEVL ++D+D GGYK++   I          GV++ +K+E 
Sbjct: 122 FASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAIKARGPVEPQDGVWAHLKYEG 181

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+HTSAA V V+PEA +     I   D+RID  R+SG GGQ VNT
Sbjct: 182 GVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNT 241

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V+  +EKSQ QN+  AM+VLRARL        A E +  R+ Q+ 
Sbjct: 242 TDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLLAERAAAAAAEAAQARRSQVR 301

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I   +   +A+ +    E
Sbjct: 302 TVDRSERIRTYNFPENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMDEAERLSQVGE 360


>gi|50954441|ref|YP_061729.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|61214606|sp|Q6AG71|RF1_LEIXX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50950923|gb|AAT88624.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 358

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 140/361 (38%), Positives = 207/361 (57%), Gaps = 18/361 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             +  L     +++ ++S+           K+   YA +S I++  + + Q   + +   
Sbjct: 3   DSVTGLIAEHDDLQQQLSDPELHSDPVRSKKVNRRYAELSRIVAAYTEWKQLTDDLEAAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +       +   D    E+  +E+ + E E ++  LL+P+D +D +  I+EI+ G GG+
Sbjct: 63  EL-------AAEDDAFAAEIPGLEQGLEESEEKLRRLLIPRDPNDSRDAIMEIKMGEGGA 115

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI------SGRGVFSRMK 177
           E+ALF GDL  MY  YA  R+WK E++  + +D GG K++             GV++ +K
Sbjct: 116 ESALFAGDLLSMYLHYADSRRWKAEIIEQTSSDLGGIKDVQVAFKGSSSDPAEGVWAHLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
           +E GVHRVQRVPATE+ GR+HTSAA V V PE  E +   I   D++ID  R+SG GGQ 
Sbjct: 176 YEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEINPNDLKIDVFRSSGPGGQS 235

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH PTGI+V+  +EKSQ QNR  AM+VLRARL   +++    E +  RK 
Sbjct: 236 VNTTDSAVRITHAPTGIVVSMQNEKSQLQNREAAMRVLRARLLAKQQEEADAEAAEFRKG 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QI + +RSERIRTYNF + RI DHR     Y L+ V+ G +  +I   + A +   + + 
Sbjct: 296 QIRTMERSERIRTYNFPENRIADHRTGYKAYNLDAVMNGALGPVIESCILADEETRLANL 355

Query: 356 S 356
           S
Sbjct: 356 S 356


>gi|255029564|ref|ZP_05301515.1| peptide chain release factor 2 [Listeria monocytogenes LO28]
          Length = 366

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 184/348 (52%), Gaps = 16/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---T 64
            +  ++ R AE+E +M +    +      +     +        +   ++E++ +     
Sbjct: 25  DLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    +L +     +              L+  D  D  + ILE+  G GG+E
Sbjct: 85  LLKEEADEDLQEELEKDIKAYMATISA-----FELKLMLSDPYDKNNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR
Sbjct: 140 SQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSA
Sbjct: 200 LVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VR+THIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G
Sbjct: 260 VRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG 319

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y F     + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 320 ---SQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
 gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
 gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
 gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
          Length = 354

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 111/352 (31%), Positives = 179/352 (50%), Gaps = 10/352 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M          L    +  E +M+E    D      +     + + +K   ++   +E  
Sbjct: 1   MALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL   +   + D +     Q E +    ++++  +     LL     D  + ILEI  G 
Sbjct: 61  DLKVTLELISEDPD--SGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGA 118

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+EA  +   L RMY R+A    +KV+VL     +  G   +   ISG   +  ++ E 
Sbjct: 119 GGTEAQDWGSMLLRMYTRWAESHNFKVDVLDYQVGEVAGINSVSILISGENAYGYLRSEK 178

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHR+ R+   +++GR HTS A+V V+PE   ++ + I  +++++D  RASG+GGQHVN 
Sbjct: 179 GVHRLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNK 238

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ-- 296
           T SAVRITHIPTGI+V + +++SQ QNR  A+ +L+++LY++E ++ A E++     Q  
Sbjct: 239 TSSAVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLD 298

Query: 297 IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IG G    +IR+Y F     + DHR N     +  V+ G +D  IN  L   
Sbjct: 299 IGWG---SQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347


>gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
 gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
 gi|167652486|gb|EDR96615.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
 gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
          Length = 367

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 177/341 (51%), Gaps = 6/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + + K R  ++EL M      +   +  +    +  +  ++  Y+  K + +D+ T+I  
Sbjct: 27  LEEKKERIEQLELDMEAPGFWEDLEESQKVVREVKGLKDQVEGYEGLKGQFEDIETLIEM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            +   E  +    E      E       +    L     D  + IL + AG GG+E+  +
Sbjct: 87  AS--EEEDEELAAETQEAFAEFETAYENLRISTLLSGEYDKNNAILSLHAGAGGTESCDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G L+RMY R+A  + ++ +V+   D D+ G K +   I G   +  ++ E GVHR+ R+
Sbjct: 145 AGMLYRMYTRWAGKKGFETKVIDYLDGDEAGIKSVTVEIKGENAYGYLRSERGVHRLVRI 204

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS A+  V+PE  E  +V+I  EDIRIDT RASG+GGQH+N TDSA+RIT
Sbjct: 205 SPFNAAGKRQTSFASCDVMPEIDEDLNVEIADEDIRIDTYRASGAGGQHINKTDSAIRIT 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTGI+V   +E+SQH+N+ +AMK+L+ +LY ++ ++   + S  R   +G      +I
Sbjct: 265 HIPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKEQQHLEKLSDIR-GDVGDNGWGSQI 323

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y       + DHR N        VL G +D  +N  L  
Sbjct: 324 RSYVLQPYTMVKDHRTNKESGNPSAVLDGDLDGFMNAYLAW 364


>gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
 gi|259585245|sp|C4L5K9|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
          Length = 366

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 174/345 (50%), Gaps = 16/345 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHTV 65
           + + + R AE+E  M+     D   K  +   E   +  ++ K      + ++ +    +
Sbjct: 26  LTEKEARIAELENEMTYPDFWDNQEKAQKVIDESNGLKAMVDKYQDLANQHEDGEVTLEL 85

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I +        +L +      ++            +L     D  + ILE+  G GG+E+
Sbjct: 86  IKEEPDAEMQEELGESIQALKKEFDD-----FELEILLNGPYDANNAILELHPGAGGTES 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY+R+A  + WKVE +     ++ G K +   I G   +  +K E G+HR+
Sbjct: 141 QDWASMLLRMYQRFADKQGWKVETVDYLPGEEAGVKSVTLRIVGHNAYGYLKAEKGIHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  ++++  ED+RIDT RASG+GGQH+NTTDSAV
Sbjct: 201 VRISPFDSSGRRHTSFVSCDVMPEFDDDIEIEVRTEDLRIDTYRASGAGGQHINTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITH+PTG++V   +E+SQ +NR  AMK+L+A+LY  E      +    R  K  IG G 
Sbjct: 261 RITHVPTGVVVSCQTERSQIKNRESAMKMLKAKLYQRELDEQQRKLDEIRGEKTDIGWG- 319

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y F     + DHR N  +     V+ G +   I+  L 
Sbjct: 320 --SQIRSYVFHPYSMVKDHRTNYEVGNTSGVMDGDVMPFIDAYLR 362


>gi|254491393|ref|ZP_05104572.1| peptide chain release factor 2 [Methylophaga thiooxidans DMS010]
 gi|224462871|gb|EEF79141.1| peptide chain release factor 2 [Methylophaga thiooxydans DMS010]
          Length = 348

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 182/343 (53%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            D   +  E+   +      D      KL +E A++  I++ +S +    ++ +DL  + 
Sbjct: 11  DDKAEQLVEVTRELESPSVWDDPDRAQKLGQERASLEKIVTTLSSHRDTLEDAKDLLELA 70

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N D E  D    ++  +EK + +LE +           D  S  ++I++G+GG+EA 
Sbjct: 71  VEEN-DQETFDAITADLDELEKGLEKLEFQRM----FSGKLDKNSAYIDIQSGSGGTEAQ 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   + +KVE++  S  +  G K     + G   F  ++ E+GVHR+ 
Sbjct: 126 DWANILLRMYLRWGESQDYKVELMEVSAGEVAGIKSATIRMEGEYAFGMLRTETGVHRLV 185

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A++ V PE    I++DI   D+R+DT RASG+GGQHVNTTDSA+R
Sbjct: 186 RKSPFDSGARRHTSFASIFVYPEVDDTIEIDINPADLRVDTYRASGAGGQHVNTTDSAIR 245

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITH PT I+V   +E+SQH+N+ +AM  LRA+LY++E ++     + +   K  IG G  
Sbjct: 246 ITHEPTNIVVQCQNERSQHKNKDQAMNQLRAKLYELELQKQNEVKQAAEESKSDIGWG-- 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y   Q RI D R  +     + VL G +D  I   L 
Sbjct: 304 -SQIRSYVLDQSRIKDLRTGVETGNTQAVLDGDLDQFIEASLK 345


>gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N]
 gi|123515203|sp|Q2L224|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N]
          Length = 367

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +       L  E  ++  ++  ++   Q   +  +L  + 
Sbjct: 30  DAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLTELGQGVADALELFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D+   +  + +    ++ +  LE    +  +  +  D  +C L+I+AG GG+EA 
Sbjct: 90  AADEDDA-TLESIENDANTFQERLEGLE----FRRMFSNPADPLNCFLDIQAGAGGTEAQ 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +YA  + +K EVL  S+ +  G K     + G   F  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFGYLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A+V V PE     +V++   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+P+GI+V   +++SQH+NR  AM++L+++LY++E ++   E+    + K  +G G  
Sbjct: 265 ITHMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQKLEDSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
 gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
          Length = 365

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 171/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E++  +      +       L +E A++  ++  ++   Q   +  DL  + 
Sbjct: 28  DVKKERLEEVDRELEVPDVWNDPARAQALGKERASLERVVHTLANMAQGLNDNADLLEMA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +      +     +     E  +   ++ +  +     D+ +  L+I++G GG+E+ 
Sbjct: 88  AEEDD-----EATVASIEKDVVEFEKQIADLEFRRMFSGEMDESNAYLDIQSGAGGTESQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   R +K EV+  SD +  G K       G   F  ++ E GVHR+ 
Sbjct: 143 DWASILMRMYLRWGDRRGFKTEVMEMSDGEVAGIKSATIRFEGEYAFGWLRTEIGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V V PE    I++++   D+R+D  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSDNRRHTSFASVFVSPEVDDNIEIEVNPADLRVDVFRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
            TH+PTG++V   +E+SQ QNR RAMK+L+A+LY++E ++     +   + K  +  G+ 
Sbjct: 263 FTHLPTGVVVACQAERSQIQNRERAMKMLKAKLYELEVQKRNAVSQALEDTKSDVSWGN- 321

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y   Q RI D R        + VL G +D  I   L 
Sbjct: 322 --QIRSYVLDQSRIKDLRTGHETGNTQAVLDGDLDPFIEASLK 362


>gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
 gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
          Length = 368

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 180/350 (51%), Gaps = 12/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
                 I  +K    EI+ +M++    +   K   L +    +  ++ + +   +K ++ 
Sbjct: 19  MGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQKELKELLEEYNSLVRKWEDL 78

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  +  +   +S   ++ +      +K        +    L     D  + IL I AG
Sbjct: 79  TTLIELGLEEGDESITEEVDKEYKELKKKLED-----LKIKTLLNGPYDKNNAILSIHAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           +GG+EA  +   L RMY R+A  + + VE L     ++ G K +   I G   +  +K E
Sbjct: 134 SGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           +GVHR+ R+   +A+GR HTS A V VLPE   +I+V+I  ED+RIDT RASG+GGQ+VN
Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQYVN 253

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T+SAVRITH+PTGI+V   +E+SQ QNR  AMK+L+A+L D+  K    +     K + 
Sbjct: 254 KTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEH 312

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                  +IR+Y F     + DHR N  +  ++ V+ G IDD IN  L  
Sbjct: 313 KEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQ 362


>gi|67461211|sp|Q8Y4D8|RF2_LISMO RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 184/348 (52%), Gaps = 16/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---T 64
            +  ++ R AE+E +M +    +      +     +        +   ++E++ +     
Sbjct: 25  DLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    +L +     +              L+  D  D  + ILE+  G GG+E
Sbjct: 85  LLKEEADEDLQEELEKDIKAYMATISA-----FELKLMLSDPYDKNNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR
Sbjct: 140 SQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSA
Sbjct: 200 LVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VR+THIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G
Sbjct: 260 VRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG 319

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y F     + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 320 ---SQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|53802400|ref|YP_112836.1| peptide chain release factor 2, programmed frameshift
           [Methylococcus capsulatus str. Bath]
 gi|53756161|gb|AAU90452.1| peptide chain release factor 2, programmed frameshift
           [Methylococcus capsulatus str. Bath]
          Length = 365

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 164/343 (47%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +    D       L +E   +  ++++++       +  +L  + 
Sbjct: 28  DTKQERLTEVLRELEDPRIWDNPERAQALGKERTQLEGVVNRLNEIAAGIDDAAELLQLA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +  +  +A                   +  +     D  +  L+I+AG+GG+EA 
Sbjct: 88  VEEDDEDSVESVAADLAHYESVVAEM-----EFRRMFSGEMDPNNAFLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   + +K E++  S  +  G K       G   +  ++ E+GVHR+ 
Sbjct: 143 DWAQMLERMYLRWGERKGFKTELVEESPGEVAGIKSATIRFEGEYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS ++V V PE  +         D+R D  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGNRRHTSFSSVFVSPEIDDNIDIDINPADLRTDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH NR   MK LRA+LY++E ++   E+    + K  IG G  
Sbjct: 263 ITHLPTGIVVQCQNQRSQHANRDWCMKQLRAKLYELEMQKRNTEKQKLEDSKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y   Q RI D R N+     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDQSRIKDLRTNVETGNPQAVLDGDLDMFIEASLK 362


>gi|170017955|ref|YP_001728874.1| peptide chain release factor 2 [Leuconostoc citreum KM20]
 gi|238688939|sp|B1MW26|RF2_LEUCK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169804812|gb|ACA83430.1| Peptide chain release factor 2 [Leuconostoc citreum KM20]
          Length = 372

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 182/343 (53%), Gaps = 5/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A+ E RM+E    D   K  +     + + ++   +     + +++  +I 
Sbjct: 25  DLEALTEEIADFENRMTEPGFWDDNTKAQKVIEENNVLKNRRDSFLNLTNQAEEIEVLID 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D    D A     +I +  +++E      LL +  D + + ILE+  G+GG+E+  
Sbjct: 85  MLAEDPGDVDTATELADSIAQAQKDVEAYNLEQLLTEPYDAN-NAILEVHPGSGGTESTD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L+RMY R+A    ++V+VL     D+ G       I+G   F  ++ E GVHR  R
Sbjct: 144 WGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRFVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS  +V V+PE    I+V++  +DI++D  R+ G+GGQ+VN   + VR+
Sbjct: 204 ISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRL 263

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V+S+ E++Q+ NR  AMK+L+++LY +E ++   ER+A    ++ +G    +
Sbjct: 264 THEPTGIVVSSTVERTQYGNRDYAMKLLKSKLYQLELEKQEAERAALTGEKMENG-WGSQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y     + + DHR N    + + VL G +D  IN  L   
Sbjct: 323 IRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110]
 gi|259585247|sp|C5CUX0|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 367

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +   K   L  E  ++  ++  +        +  +L+ + 
Sbjct: 30  DAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRLTSGLSDNTELYEMS 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + D +       +  A+E +I++LE    +  +  +  D  +  ++I+AG GG+EA 
Sbjct: 90  KE-DGDMDGLQSIADDAAALETDIKQLE----FRRMFNNPADPLNAFVDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +YA  + +K ++   +  D  G K     + G   F  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE  +  +++I   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V     +SQH NR  A K LR+RLYD E ++   E+    + K  +G G  
Sbjct: 265 LTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|145596156|ref|YP_001160453.1| peptide chain release factor 1 [Salinispora tropica CNB-440]
 gi|145305493|gb|ABP56075.1| bacterial peptide chain release factor 1 (bRF-1) [Salinispora
           tropica CNB-440]
          Length = 362

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 155/347 (44%), Positives = 208/347 (59%), Gaps = 18/347 (5%)

Query: 4   LSHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +S +++  L + +AE+E R+++       +   ++   YA + P+    +   Q      
Sbjct: 1   MSSERLVTLLDEYAELENRLADPAIHADQNTARRVGRRYAELVPLHKAATELTQ------ 54

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
                +      +        E  AI   +  LE  +  LL+P+D  D K  I+EI+AG 
Sbjct: 55  -ARADLAAAKELAAEDPAFAAEAEAIAATLPALEECLAELLIPRDPHDAKDVIVEIKAGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVF 173
           GG E+ALF GDL RMY RYA    W VEV+ + D+D GG K++   I          GV+
Sbjct: 114 GGEESALFAGDLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVW 173

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           SR+K+E GVHRVQRVP TE+ GR+HTSAA V +LPEA EIDV I   ++RID  R+SG G
Sbjct: 174 SRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLMLPEAEEIDVTIDPNELRIDVFRSSGPG 233

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI+V   +EKSQ QNR +AM++LRARL  V +++     S  
Sbjct: 234 GQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARLLAVAQEQADAAASDA 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
           RK Q+ + DRSERIRTYNF Q RITDHRI  T Y L+  L G +D +
Sbjct: 294 RKAQVRTVDRSERIRTYNFPQNRITDHRIGYTAYNLDLALAGELDGV 340


>gi|147818957|emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 146/359 (40%), Positives = 218/359 (60%), Gaps = 29/359 (8%)

Query: 1    MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            ++ +  +++  +++R A ++  ++    S   Y +  +E   +   I  I+    K++E 
Sbjct: 1207 LIGIMEQRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKLRSSIEHITELRNKQKEI 1266

Query: 60   QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
              L +++ + + D ++ ++A  E+     E + L+N +   LLPKD  D++ CILE+RAG
Sbjct: 1267 DGLKSLMAECSEDKDMLNMAAEELGQAAGEEKRLQNLLLKSLLPKDEADERDCILEVRAG 1326

Query: 120  TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            TGG EA+LF  D+F+MYE+Y+    WK EV+  +++D  GYKE    ISG GV+ ++KFE
Sbjct: 1327 TGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLKFE 1386

Query: 180  SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
            SG+HRVQ                 V V          +  ED+RIDT R+ GSGGQH NT
Sbjct: 1387 SGIHRVQ-----------------VDV---------QLRNEDLRIDTYRSGGSGGQHANT 1420

Query: 240  TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
            T+SAVRITHIP+G+ V    E+SQH N+ +A+KVL A+LY++ER R+  +RS  R  QIG
Sbjct: 1421 TNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRMEQIG 1480

Query: 299  SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
            SGDRSERIRTYNF QGR+TDHR+ +T + +  V+QG  +D  I+ LL   +   I S S
Sbjct: 1481 SGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQQEMDAIASFS 1539


>gi|291320737|ref|YP_003516002.1| peptide chain release factor 1 [Mycoplasma agalactiae]
 gi|290753073|emb|CBH41049.1| Peptide chain release factor 1 [Mycoplasma agalactiae]
          Length = 358

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 141/361 (39%), Positives = 224/361 (62%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M     K + ++K  + E+  ++ +   +    +   + +E A I  I  K   Y+   +
Sbjct: 1   MEKTMFKSLSEIKQSYLELLKKIDDPEVISNIKEYSAINKEIAKIREISEKFITYENILK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++   + +    + A++ +     ++ ELE  +  L+LP+D +DDK+ I+EIR
Sbjct: 61  DVEQAKIMLESKSEEE--VEFAKMIIDENSLKLEELEERLKILILPQDENDDKNIIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +F GDLFRMY ++A    +++++LS++    GG+ +IV +I G   +S+ K
Sbjct: 119 GAAGGDEANIFAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GR+HTS  TV V+PE  +  +++I   D++ID  R+SG+GGQ 
Sbjct: 179 FESGVHRVQRVPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQS 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PT I+V +  E+SQ  NR  A+ +L+++LYD+E ++ A E S  RKL
Sbjct: 239 VNTTDSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             G GDRSE+IRTYN+ Q R+TDHRI+ +   L+ +++G +  II+ LL   Q + I  +
Sbjct: 299 A-GHGDRSEKIRTYNYPQDRVTDHRISFSTS-LKPIMEGKLTPIIDALLAEEQNQKIKES 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|300858256|ref|YP_003783239.1| peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685710|gb|ADK28632.1| peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205977|gb|ADL10319.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis
           C231]
 gi|302330530|gb|ADL20724.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis
           1002]
 gi|308276212|gb|ADO26111.1| Peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis I19]
          Length = 356

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 144/356 (40%), Positives = 216/356 (60%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  IE +M++  ++     + KL++ Y+ + PII+  +   Q + + +    +
Sbjct: 7   VDDIVSEYQGIEAQMADPETMGDQMLFRKLSKRYSELQPIINVNNKLVQARDDYEVAKEM 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +   E           +E E+  LE ++  LL P+D  D    ++E++AG GG EA
Sbjct: 67  AHEDHEFQEEAA-------RLETEVVVLEEQLADLLAPRDPHDGDDIVMEVKAGAGGEEA 119

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF G+L RMY+RYA    + +EVL SS++D GG K++  +I  +       +S  KFE 
Sbjct: 120 ALFAGELVRMYQRYADKHGFAIEVLDSSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEG 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E+ +++I  +D+RID  R+SG GGQ VNT
Sbjct: 180 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEIEIDDKDLRIDVYRSSGKGGQGVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QN+ RAM+VL ARL  +  ++   E +  R  QI 
Sbjct: 240 TDSAVRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQSMAEEQAEAEAAEGRAAQIR 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYN+ + RI+DHRI      L+ VL G +DD+   L  A +A+ + +
Sbjct: 300 TMDRSERIRTYNWPENRISDHRIGFKANNLDSVLNGELDDLFTALRAAERAERLEA 355


>gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium sp. P08]
          Length = 361

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 203/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   +   I +++ R  EIE++++    +       +L + +A +  ++S     DQ   
Sbjct: 1   MSESAQHAIDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +  +      +++  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DIEAAEDLANE--DPVFVQEAERLRGQLDLARTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 114 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   DIR+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPADIRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + ++++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADEVRRRMA 353

Query: 354 SASE 357
             SE
Sbjct: 354 QQSE 357


>gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|67461157|sp|Q71WR9|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 366

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 184/348 (52%), Gaps = 16/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---T 64
            +  ++ R AE+E +M +    +      +     +        +   ++E++ +     
Sbjct: 25  DLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    +L +     +              L+  D  D  + ILE+  G GG+E
Sbjct: 85  LLKEEADEDLQEELEKDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR
Sbjct: 140 SQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSA
Sbjct: 200 LVRISPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VR+THIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G
Sbjct: 260 VRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG 319

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y F     + DHR N     ++ V+ G +D+ IN  L + 
Sbjct: 320 ---SQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 364


>gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris]
          Length = 374

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 165/344 (47%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +      +       L  E + +   +  I+       +  +L  + 
Sbjct: 28  DVKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADVLAGLTDAGELLDLA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +       ++   +  + +LE +           D  +  ++I+AG GG+EA 
Sbjct: 88  -ESEQDEDTAVAVIADLDKYQAHVEKLEFQRM----FSGQMDGANAFVDIQAGAGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R WK E++  S  +  G K     I G   +  +K E GVHR+ 
Sbjct: 143 DWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS  +V V PE    I++DI   D+R D  R+SG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPT  +V   + +SQHQNR  AMK+L A+LY++E ++   ER A    K  IG G  
Sbjct: 263 ITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR Y   Q RI D R  +     + VL G +D+ +   L A
Sbjct: 321 -SQIRNYVLDQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|163748442|ref|ZP_02155696.1| peptide chain release factor 2 [Shewanella benthica KT99]
 gi|161332020|gb|EDQ02697.1| peptide chain release factor 2 [Shewanella benthica KT99]
          Length = 352

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 171/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +  S   +       L +E AA+  I+  I   D   ++ + L  + 
Sbjct: 15  DAKKERLEEVSRELESSDIWNDPDNAQALGKERAALELIVKTIDDMDTGLEDVEGLVELA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    D +       ++        + +  +     D  +  L+I++G+GG+EA 
Sbjct: 75  IEEADEETFNDASAELDGLDKRLAD-----LEFRRMFSGPHDIANSYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +K E++  +  D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMYLRWGDAHDFKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG+ HTS  +V V PE  +  ++DI   D+RIDT RASG+GGQH+N T+SA+R
Sbjct: 190 RKSPFDSSGKRHTSFCSVFVYPEIDDTIEIDINPSDLRIDTYRASGAGGQHINKTESAIR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+NR  AMK L+A+LY++E  +   E+  + + K  IG G  
Sbjct: 250 ITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNEEKQAAEDAKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDARIKDLRTGVESRNTQSVLDGGLDMFIEASLK 349


>gi|304386240|ref|ZP_07368573.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
           20284]
 gi|304327597|gb|EFL94824.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
           20284]
          Length = 362

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 181/349 (51%), Gaps = 10/349 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    +  E +M+E    +   K  +     + + +K   +       ++L   + 
Sbjct: 16  DLDALNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLE 75

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +++     Q E      +  +L  +    LL     D  + ILEI  G GG+E+  
Sbjct: 76  LLEMEADP--DVQAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQD 133

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A   ++KV++      +  G   +   + G   +  ++ E GVHR+ R
Sbjct: 134 WGSMLLRMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHRLVR 193

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS A+V V+PE    ++V+I  +D+R+D  R+SG+GGQH+N T SAVRI
Sbjct: 194 LSPFDSAGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRI 253

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRS 303
           TH+PTGI+V + +E+SQ QNR+ AM +L+A+L+++E ++ A E++     Q  IG G   
Sbjct: 254 THLPTGIVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWG--- 310

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y F     + DHR NL    ++ V+ G +DD IN  L     K 
Sbjct: 311 SQIRSYVFHPYSMVKDHRTNLETANVQGVMDGDLDDFINAYLQWKLQKR 359


>gi|67461212|sp|Q927Y4|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 16/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---T 64
            +  ++ R AE+E +M +    +      +     +        +   ++E++ +     
Sbjct: 25  DLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    +L +     +              L+  D  D  + ILE+  G GG+E
Sbjct: 85  LLKEEADEDLQAELEKDIKAYVATISE-----FELKLMLSDPYDKNNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR
Sbjct: 140 SQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++SGR HTS  +V V+PE   EI++++  ED++IDT RA+G+GGQH+NTTDSA
Sbjct: 200 LVRISPFDSSGRRHTSFVSVDVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VR+THIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G
Sbjct: 260 VRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG 319

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y F     + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 320 ---SQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|183984069|ref|YP_001852360.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M]
 gi|238690952|sp|B2HQL3|RF1_MYCMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183177395|gb|ACC42505.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M]
          Length = 357

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 146/340 (42%), Positives = 202/340 (59%), Gaps = 17/340 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + I  L    A++E  +++       D   K    +A ++PI++        +++ + 
Sbjct: 4   PVQTIDVLLAEHADLERALADPELHSRPDEARKAGRRFARLAPIVATYRKLVAAREDLET 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            H +           +    E   +E  + EL++++  +L P+D  D    +LE+++G G
Sbjct: 64  AHELAA-------TDESFAAEAAELEARVAELDSQLTDMLAPRDPHDADDIVLEVKSGEG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-----SGRGVFSRM 176
           G E+ALF  DL RMY RYA    W V VL  + +D GGYK+    I     +  GV+SRM
Sbjct: 117 GEESALFAADLARMYIRYAERHGWTVTVLGETTSDLGGYKDATLAIASKGDTADGVWSRM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GRVHTSAA V V PE  E+ +V I   D+RID  R+SG GGQ
Sbjct: 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQ 236

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTGI+V   +E+SQ QN++RAM+VL ARL  +  ++   + SA+R 
Sbjct: 237 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEEQAMADASADRA 296

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
            QI + DRSERIRTYNF + RITDHRI    + L+ VL G
Sbjct: 297 SQIRTVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDG 336


>gi|111225294|ref|YP_716088.1| peptide chain release factor 1 [Frankia alni ACN14a]
 gi|111152826|emb|CAJ64570.1| peptide chain release factor RF-1 [Frankia alni ACN14a]
          Length = 362

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 146/341 (42%), Positives = 212/341 (62%), Gaps = 17/341 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L    AEIE ++++    +   K   L+  YA ++P++      ++ + +       
Sbjct: 11  LDGLVAEHAEIEGQLADPAVHNDPAKARALSRRYAQLAPVVDLARELERVEGDL------ 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                  +      + EV  ++ E+  L   +   L+P D DD +  ILE++AG GG E+
Sbjct: 65  -AAARELAAEDTSFRGEVDDLDVELAGLNERLRAYLVPVDPDDARDAILEVKAGAGGEES 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG------VFSRMKFE 179
           ALF GDL RMY RYA  R WK E+L ++ +D GGY+++   +  RG      V+ R++FE
Sbjct: 124 ALFAGDLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAVKARGSAAGDGVYGRLRFE 183

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
            GVHRVQRVP TE++GR+HTSAA V VLPEA E+DV+I   D+RID  R+SG GGQ VNT
Sbjct: 184 GGVHRVQRVPVTESAGRIHTSAAGVLVLPEAEEVDVEIDPNDLRIDVFRSSGPGGQSVNT 243

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V   +EKSQ QN+  A+++LRARL  V R++   E S  R  Q+ 
Sbjct: 244 TDSAVRITHVPTGLVVSCQNEKSQLQNKESALRILRARLLGVAREKAEAEASLARASQVR 303

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
           + DRSER+RTYNF++ RI+DHR+    + L+ VL G +D++
Sbjct: 304 TVDRSERVRTYNFAENRISDHRVGYKAHNLDQVLDGELDEV 344


>gi|238897260|ref|YP_002922937.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465015|gb|ACQ66789.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 348

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            + K R  EI   + +           KL +E A +  I+  +S  +++ ++   L  + 
Sbjct: 11  DEKKERLEEINAELEQPDIWKQPEWAQKLGKERAILQEIVETLSQLEKELKDVSTLLDLA 70

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        +          + I +  N + +  +    +D   C L++++G+GG+EA 
Sbjct: 71  IEAQDRETFNEAVFE-----LEAIDKKLNRLEFRRMFSGKNDFADCYLDLQSGSGGTEAQ 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +K E++  SD +  G K     I+G   F  ++ E+GVHR+ 
Sbjct: 126 DWANMLLRMYLRWADSKGFKTEIIEISDGEVAGIKSATLKITGDHAFGWLRTETGVHRLV 185

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+  V PE    ID+DI   D+RID  RASG+GGQH+N T+SAVR
Sbjct: 186 RKSPFDSGARRHTSFASAFVYPELEDNIDIDINPADLRIDVYRASGAGGQHINKTESAVR 245

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITH+PT I+    S++SQH+N+ +A K L+A+LY+ E ++     +   + K  IG G  
Sbjct: 246 ITHLPTNIVTQCQSDRSQHKNKEQAFKQLKAKLYEFEMQKKNADKKIMEDNKSDIGWG-- 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  L     + VL GY+D  I   L A
Sbjct: 304 -SQIRSYILDDSRIKDLRTGLETRNTQAVLDGYLDKFIEASLKA 346


>gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
           155]
 gi|118170854|gb|ABK71750.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
           155]
          Length = 359

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 17/357 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I  L    A++E ++++           K+   +A +SPI++     +  + + +    +
Sbjct: 10  IEALLAEHADLERQLADPALHADAGAARKVGRRFAQVSPIVACYRKLEAARGDLEAAREL 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D  S ++  +           ++ EL+N++  LL P+D  D    +LE+++G GG E+
Sbjct: 70  AADDASFADEVEEL-------TAKVAELDNQLTDLLAPRDPHDADDIVLEVKSGEGGEES 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF  DL RMY RYA    W V +L  + +D GGYK+   +I  RG     V++R+KFE 
Sbjct: 123 ALFAADLARMYIRYAERHGWTVTLLDETTSDLGGYKDATLSIRSRGDSADGVWARLKFEG 182

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V V PE  E++   I   D+RID  R+SG GGQ VNT
Sbjct: 183 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEEVQIDESDLRIDVYRSSGKGGQGVNT 242

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL  +  ++   + SA+R  QI 
Sbjct: 243 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEADASADRASQIR 302

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           + DRSERIRTYNF + RI DHRIN   + L+ VL G +D +++ L  A +   +  A
Sbjct: 303 TVDRSERIRTYNFPENRIADHRINFKAHNLDQVLDGDMDALLDALAAADKQSRLQQA 359


>gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187]
 gi|259585231|sp|C4LCN9|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187]
          Length = 365

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 171/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +A+  +++ I +  Q  ++ + L ++ 
Sbjct: 28  DAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDVLTQGAEDVEMLVSLA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +            + +   ++ +  +     D   C ++I++G+GG+EA 
Sbjct: 88  VEGEDEETFHEAETE-----ADALEKKLVDLEFRRMFSGQHDASDCYMDIQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +K E++  SD D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 143 DWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS  +  V PE  E  +++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFCSAFVYPEIDEDVEIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPT  +    +++SQH+N+ +AMK L+A+LY++E  +   E+ A    K  IG G  
Sbjct: 263 ITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQALEETKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIEASLK 362


>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
 gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
           defluvii]
          Length = 377

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 180/346 (52%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +  +     +IE++ S+           K+    AA+   +S+    ++++ + + L  
Sbjct: 21  DLARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQNDIEALLE 80

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +           + E+LA  +   +   +    LL     D  + I  I  G GG+E
Sbjct: 81  LALESGD-----AGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGTE 135

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE L     D+ G K    ++SG   +  +K E+GVHR
Sbjct: 136 SQDWAQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVHR 195

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+ R HTS A+V V PE   ++ V I  +D+R+DT RA G+GGQ+VN  ++A
Sbjct: 196 LVRISPFDANKRRHTSFASVFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVETA 255

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSG 300
           +RITHIPTGI+V   +E+SQ QNR  AMK+L+ARL++VE+++   E +A    K  I  G
Sbjct: 256 IRITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEKKDIAWG 315

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y F   + + DHR    + ++  V+ G +D  I   L 
Sbjct: 316 ---SQIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYLQ 358


>gi|33596662|ref|NP_884305.1| peptide chain release factor 2 [Bordetella parapertussis 12822]
 gi|81579293|sp|Q7W8T4|RF2_BORPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33573363|emb|CAE37347.1| peptide chain release factor 2 [Bordetella parapertussis]
          Length = 367

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +       L  E  ++  ++  ++       +  +L  + 
Sbjct: 30  DAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              +SD    +  + +V   ++++  LE    +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  -LADSDDATLEAIEHDVDRFQEKLETLE----FRRMFANPADPLNCFVDIQAGAGGTEAQ 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +YA  + +K E+L  S+ D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A+V V PE     +V++   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH P+GI+V   +++SQH+NR  AM++L+++LY++E +    E+    + K  +G G  
Sbjct: 265 ITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 367

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +   K   L +E  ++S ++  +    ++  +  +L+ + 
Sbjct: 30  DAKFERLRTVNASLEDPSVWNDPKKAQELGKEQKSLSAVVVTLDKLTRELADNAELYEMS 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        +   + + A   ++R L  E+ +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  KEEGD-----EAGLLTIEAETAKLRPLIEELEFRRMFSNEADPLNCFVDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L R Y +YA  + +K  V   +  D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 145 DWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE  +  +++I   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V     +SQH NR  A + LR+RLYD E ++   E+    + K  +G G  
Sbjct: 265 LTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDTKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 368

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 173/348 (49%), Gaps = 10/348 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           SH  + +   R  E+E R +     D            S +   I  + Q     +D   
Sbjct: 25  SHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDTIDNWQQVIDSFEDAEV 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    ++++     + EV      + +    +    +     D  + +L I AG GG+E
Sbjct: 85  LLELAIAENDHE--TEQEVSRALNSVEQRLAAMELECMFNGEHDASNAMLTIHAGAGGTE 142

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A  + +  E+L     D+ G K +   + GR  +  ++ E G+HR
Sbjct: 143 AQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLVKGRWAYGYLRSEMGIHR 202

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +  GR HTS A+V + PE    I+V+I  +D+RIDT RASG+GGQHVN T SA
Sbjct: 203 LVRISPFDTGGRRHTSFASVFIFPELDDNIEVEINDKDLRIDTYRASGAGGQHVNKTSSA 262

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           +RITH+P+GI+V   +E+SQH+N+  AMK+L+A+LY+ ER     E+      K +I  G
Sbjct: 263 IRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANRKEEQQHLHGDKKEIAWG 322

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y     R + DHR N     ++ VL G +D  I   L   
Sbjct: 323 ---SQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYLLWQ 367


>gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
           JCSC5402]
 gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
           JCSC5402]
          Length = 350

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 182/349 (52%), Gaps = 17/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHT 64
            + + +    E E  M++    +   K  +       +  ++ + S  ++  +  + L  
Sbjct: 9   DLEEKETNIKEYEEMMADPDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGLENSEVLFE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + + +   ++     ++     ++++ N+    +L     D  + ILE+  G GG+E
Sbjct: 69  MYKEESDEDTHQE-----LIEQLNTLQQIANDFELKMLLSGEFDANNAILELHPGAGGTE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+R+A  + +KVE +     D+ G K +   I G   +  +K E GVHR
Sbjct: 124 SQDWGEMLLRMYQRFADKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE--DIRIDTMRASGSGGQHVNTTDS 242
           + R+   ++SGR HTS  +  V PE    +++I +   DI+IDT RASG+GGQHVNTTDS
Sbjct: 184 LVRISPFDSSGRRHTSFVSCEVTPEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNTTDS 243

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGS 299
           AVRITH PTGI+V   +E+SQ +NR +AMK+L+A+LY  + +    E +A R  Q  IG 
Sbjct: 244 AVRITHQPTGIVVTCQNERSQIKNREQAMKMLKAKLYQKKIEEQEAELAAIRGEQKEIGW 303

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           G    +IR+Y F     + DHR N+       V+ G ID  I+  L + 
Sbjct: 304 G---SQIRSYVFHPYSMVKDHRTNVETGNTNAVMDGDIDLFIDAYLKSQ 349


>gi|56421641|ref|YP_148959.1| peptide chain release factor 2 in translation [Geobacillus
           kaustophilus HTA426]
 gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus
           kaustophilus HTA426]
          Length = 327

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 109/332 (32%), Positives = 175/332 (52%), Gaps = 16/332 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+     D         +    +  ++ + S  +++    +  + ++ +   D    +L 
Sbjct: 1   MAAPNFWDDQKSAQAVISEANALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     ++             LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  EEAKKLMKDFSE-----FELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     ++ G K +   I G   +  +K E GVHR+ R+   +ASGR HT
Sbjct: 116 AEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE    I+++I  E+++IDT R+SG+GGQHVNTTDSAVRITH+PTGI+V   
Sbjct: 176 SFVSCEVVPELDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AM +L+A+LY  + +    E +  R  Q  IG G+   +IR+Y F    
Sbjct: 236 SERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGN---QIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + DHR N+ +  ++ V+ G ID  I+  L A
Sbjct: 293 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRA 324


>gi|149183883|ref|ZP_01862274.1| peptide chain release factor 1 [Bacillus sp. SG-1]
 gi|148848402|gb|EDL62661.1| peptide chain release factor 1 [Bacillus sp. SG-1]
          Length = 253

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 140/253 (55%), Positives = 190/253 (75%), Gaps = 1/253 (0%)

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
            +DDK+ I+E+R   GG EAALF GDL+RMY R+A  + WK EV+ ++    GGYKEI+ 
Sbjct: 1   PNDDKNVIMEVRGAAGGDEAALFAGDLYRMYSRFAEAQGWKTEVMEANSTGVGGYKEIIF 60

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRID 225
            I+G G +S+MK+E+G HRVQRVP TE+ GR+HTS ATVA LPEA E+++DI  +DIR+D
Sbjct: 61  MINGNGAYSKMKYENGAHRVQRVPETESGGRIHTSTATVACLPEAEEVEIDIHEKDIRVD 120

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T  +SG GGQ VNTT SAVR+TH+PTG++V    EKSQ +N+ +AMKVLRAR+YD  ++ 
Sbjct: 121 TFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQRE 180

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           +  E  ANRK  +G+GDRSERIRTYNF Q R+TDHRI LT+ KL+ +L+G +D++I+ L+
Sbjct: 181 VQAEYDANRKSAVGTGDRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKMDEVIDALI 240

Query: 345 TAHQAKMIGSASE 357
              Q+K++    E
Sbjct: 241 LEDQSKLLERLEE 253


>gi|148652647|ref|YP_001279740.1| peptide chain release factor 2 [Psychrobacter sp. PRwf-1]
 gi|148571731|gb|ABQ93790.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter sp.
           PRwf-1]
          Length = 325

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 104/331 (31%), Positives = 175/331 (52%), Gaps = 15/331 (4%)

Query: 23  MSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+     +      K+++E + +  +I+ I+  D   ++   +  +  + + +  + ++ 
Sbjct: 1   MASPELWNDPERATKISKEKSQLDAVITTITGLDTTLEDAAAMLELAVEADDEGLLEEVQ 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                      + L  ++ +  +     D  +C ++I++G+GG+EA  +   L RMY R+
Sbjct: 61  NE-----LNAAQALVEDLEFKRMFDGEMDANNCFVDIQSGSGGTEAQDWAEMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +KVE++  S     G K     +SG   F  ++ E+GVHR+ R    +++   HT
Sbjct: 116 CESHGFKVEIIEVSAGSVAGVKSASFKVSGDYAFGWLRTETGVHRLVRKSPFDSNNGRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V V PE   + ++DI   D+RIDT R+SG+GGQHVNTTDSAVRITH+PTG +V   
Sbjct: 176 SFAAVFVSPEIDDDFEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTGTVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +E+SQH N+  AMK+LRA+LY++E ++   ++    + K  +G G    +IR+Y     R
Sbjct: 236 NERSQHGNKATAMKMLRAKLYELEMQKRMEQQQAVEDNKSDVGWG---SQIRSYVLDDSR 292

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           I D R  +  +    VL G +D  I   L A
Sbjct: 293 IKDLRTGVETFNTGAVLDGDLDQFIEASLKA 323


>gi|119505213|ref|ZP_01627288.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
           HTCC2080]
 gi|119458904|gb|EAW40004.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
           HTCC2080]
          Length = 347

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 181/343 (52%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            + K+R AE+EL ++E    D       L +E A++  ++  I   D+   +  DL  + 
Sbjct: 10  AEKKDRLAEVELELAEPSVWDEPERAQALGKERASLELVVKTIDDLDRGSTDSHDLLEMA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D +  D+   +   +  ++ +LE    +  +     D  +  L++++G+GG+EA 
Sbjct: 70  V-AEDDIDTADMVASDTSDLIAQLEKLE----FRRMFSGEMDPNNAYLDVQSGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   + +K  V+ +S  +  G K       G   F  ++ E+GVHR+ 
Sbjct: 125 DWTEMLLRMYLRWGESKGFKARVVEASAGEVAGLKSATVQFEGEYAFGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS A++ V PE  +  ++DI   D+R+DT R+SG+GGQHVNTTDSAVR
Sbjct: 185 RKSPFDSGGRRHTSFASIFVSPEIDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDSAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH PT  +V   +E+SQHQN+  AMK LRA+LY++E  + + ++    + K  IG G  
Sbjct: 245 ITHEPTNTVVSCQTERSQHQNKDNAMKQLRAKLYELEVLKRSADKQALEDSKADIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 303 -SQIRSYVLDDARIKDLRTQVETRNTQAVLDGDLDKFIEASLK 344


>gi|158334426|ref|YP_001515598.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
 gi|189039957|sp|B0C424|RF1_ACAM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158304667|gb|ABW26284.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
          Length = 363

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 138/342 (40%), Positives = 227/342 (66%), Gaps = 5/342 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +++  ++  F E+  R+ +         + ++ +  A++   ++    +   +QE  D  
Sbjct: 8   EKLKSVEQTFHELTRRLGDPEVATNPTEFQEVAKARASLEETVNTFEDWKATQQELADAQ 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D + D E++++A +E   + +++  LE ++  LLLP+D +D+K+ +LEIRAG GG 
Sbjct: 68  QMAKDGDEDPELKEMAAMEAAELTEKLDGLETKLKVLLLPRDPNDEKNIMLEIRAGAGGD 127

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+++ GDL R+Y +YA  +KW+V++LS S  + GG+KE +  I G  V+S++K+E+GVH
Sbjct: 128 EASIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEIQGERVYSKLKYEAGVH 187

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVPATEASGRVHTS ATVAV+PE  +++++I  +DI + T R+ G+GGQ+VN  ++A
Sbjct: 188 RVQRVPATEASGRVHTSTATVAVMPEVDDVEIEIDPKDIEMSTARSGGAGGQNVNKVETA 247

Query: 244 VRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V + H PTGI +  + E+SQ QN+ RAM++LRA+LY++E +      ++ R+ Q+G+G R
Sbjct: 248 VDLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMELQEQQASVTSMRRSQVGTGAR 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           SE+IRTYN+   R TDHR+N   + LE VL G I+ I+   +
Sbjct: 308 SEKIRTYNYKDNRATDHRLN-QNFPLEKVLVGDIELILETCI 348


>gi|33592241|ref|NP_879885.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
 gi|33601278|ref|NP_888838.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
 gi|81578745|sp|Q7VZ35|RF2_BORPE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|81580061|sp|Q7WK44|RF2_BORBR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33571886|emb|CAE41402.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
 gi|33575713|emb|CAE32791.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
          Length = 367

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +       L  E  ++  ++  ++       +  +L  + 
Sbjct: 30  DAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              +SD    +  + +    ++++  LE    +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  -LADSDDATLEAIEHDADRFQEKLETLE----FRRMFANPADPLNCFVDIQAGAGGTEAQ 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +YA  + +K E+L  S+ D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A+V V PE     +V++   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH P+GI+V   +++SQH+NR  AM++L+++LY++E +    E+    + K  +G G  
Sbjct: 265 ITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|327481446|gb|AEA84756.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166]
          Length = 370

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 171/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               +R  E+   + +    +       L  E A ++ I+  I        + +DL  + 
Sbjct: 33  DQKHDRLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLADSRDLLEMA 92

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N +  + D+        E   +     + +  +     D  +C L+I+AG+GG+EA 
Sbjct: 93  AEENDEGAVNDIVAEVERLREILEK-----LEFRRMFSHEMDPNNCYLDIQAGSGGTEAQ 147

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +  E++  S+ +  G K     I G   F  ++ E GVHR+ 
Sbjct: 148 DWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLV 207

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS + V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 208 RKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVR 267

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH N+  AMK+LRA+LY++E ++     +   + K  IG G  
Sbjct: 268 ITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWG-- 325

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  +   L  
Sbjct: 326 -HQIRSYVLDDSRIKDLRTGVERSDCQKVLDGDLDGYLEASLKQ 368


>gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J]
 gi|238691788|sp|B2U8V1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J]
          Length = 367

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 169/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E++  +      +      +L  E  ++  ++  ++  D+      +L  + 
Sbjct: 30  DVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGAAELFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  I  +                    +  +     D  +C ++I+AG GG+EA 
Sbjct: 90  REEGDDETIEAIEADTAGMRAIVEDM-----EFRRMFSGPMDAANCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +Y   + +K EVL  S+ D  G K     + G   F  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++G  HTS +++ V PE  +  ++++   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPTGI+V   +++SQH+NR  AM +L++RLY+ E ++      A    K  +G G  
Sbjct: 265 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1]
 gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 337

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 100/340 (29%), Positives = 170/340 (50%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +  ++   + +    +       L +E  ++  I+  +   D +  + +DL  +  +  
Sbjct: 4   EKLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMAREEK 63

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  I  +        +           +  +     D  +C ++I+AG GG+EA  +  
Sbjct: 64  DEDTIIAIEGDAENLKKMVEEM-----EFRRMFSGPMDANNCFIDIQAGAGGTEAQDWAS 118

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L R Y RY   + +K E+L  SD +  G K     + G   +  ++ E+GVHR+ R   
Sbjct: 119 MLLRQYLRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSP 178

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S   HTS +++ V PE     +++I   D+R+DT RASG+GGQH+N TDSAVR+TH 
Sbjct: 179 FDSSNGRHTSFSSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHA 238

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           P+GI+V   +++SQH+NR  A  +LRA+L+++E ++  +E+    + K  +G G    +I
Sbjct: 239 PSGIVVQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWG---HQI 295

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y   Q RI D R N      + VL G IDD I   L  
Sbjct: 296 RSYVLDQSRIKDLRTNFETGNTKAVLDGDIDDFIAASLKQ 335


>gi|307332073|ref|ZP_07611163.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu
           4113]
 gi|306882296|gb|EFN13392.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu
           4113]
          Length = 830

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 91/346 (26%), Positives = 156/346 (45%), Gaps = 7/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  ++   A +E + +     D      +  + +S +   +   ++ +    DL  +  
Sbjct: 485 DLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEELRGRIDDLEVLFE 544

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +    A+ E           E  +    L     D +  ++ +RA  GG +AA 
Sbjct: 545 LAADEGDADARAEAESELEAVRKAVDE--MEVRTLLSGEYDSREALVNVRAEAGGVDAAD 602

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K ++  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 603 FAEQLQRMYLRWAERHGYKTQIYETSYAEEAGIKSTTFAVQIPYAYGTLSVEQGTHRLVR 662

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 663 ISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRL 722

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G      +
Sbjct: 723 THIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWGNQ 780

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +   + VL G ID  +   +   + +
Sbjct: 781 MRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRKQQ 826


>gi|296111417|ref|YP_003621799.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154]
 gi|295832949|gb|ADG40830.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154]
          Length = 372

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 182/343 (53%), Gaps = 5/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A+ E RM+E    D  +K  +     + + ++   +     + +++  +I 
Sbjct: 25  DLEALTEEIADFENRMTEPGFWDDNVKAQKVIEENNVLKNRRDSFLNLTNQAEEIDVLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D +  ++       + K  +++E      LL +  D   + ILE+  G+GG+E+  
Sbjct: 85  MLSEDPDDVEMLAELEENVAKIQKDVEAYNLEQLLTEPYDA-NNAILEVHPGSGGTESTD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L+RMY R+A    ++V+VL     D+ G       I+G   F  ++ E GVHR  R
Sbjct: 144 WGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRFVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS  +V V+PE    I+V++  +DI++D  R+ G+GGQ+VN   + VR+
Sbjct: 204 ISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRL 263

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V+S+ E++Q+ NR  AM++L+ +LY +E ++   ER+A    ++ +G    +
Sbjct: 264 THEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGEKLENG-WGSQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y     + + DHR N    + + VL G +D  IN  L   
Sbjct: 323 IRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
 gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
          Length = 339

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 114/335 (34%), Positives = 173/335 (51%), Gaps = 6/335 (1%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
               E +M+     D   K     A ++ + S +  Y + + +  D   +I     D E 
Sbjct: 2   IENFEEKMAAPDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELA--DEEG 59

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            D    E+    K++     E    LL     D  + ILE+  G GG+E+  +   L RM
Sbjct: 60  DDSLAGEIGETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRM 119

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y R+A  R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SG
Sbjct: 120 YTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSG 179

Query: 196 RVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           R HTS  +  V+PE  +  ++DI  ED++IDT RASG+GGQH+NTTDSAVRITH+PTG++
Sbjct: 180 RRHTSFVSCDVVPEINDEVELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVV 239

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V   +E+SQ +NR RAM +LR++LY+ + +    E +  R  Q        +IR+Y F  
Sbjct: 240 VTCQNERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQ-SDIAWGSQIRSYVFHP 298

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              + DHR  +    +  V+ G +D  I+  L + 
Sbjct: 299 YSMVKDHRTQVETGNIGAVMDGDLDGFIDGYLRSQ 333


>gi|326510949|dbj|BAJ91822.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 411

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 129/353 (36%), Positives = 216/353 (61%), Gaps = 5/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++   +  + E+ +R+ +   V     Y KL +  + +  +++    + + +++ ++   
Sbjct: 53  KLDSTEKAWKEMSIRLGDPDIVSDPGEYQKLAQSVSNLGEVVTAYGEFKECERQIEETKA 112

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  ++  D ++ ++   E+ ++  ++ ELE  +  LLLP D  + ++ +LE+RAGTGG E
Sbjct: 113 LQKENGDDPDMAEMIASELESLSDQLAELEERLTVLLLPSDPLNSRNILLEVRAGTGGDE 172

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A ++ GDL RMY+RY  L  WK + +S S+ + GG+K  V  + G+ V+S++KFESGVHR
Sbjct: 173 AGIWAGDLVRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHR 232

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTS ATVA++PEA E+DV I  +DI +   R+ G+GGQ+VN  ++A+
Sbjct: 233 VQRVPQTETMGRVHTSTATVAIMPEADEVDVVIDPKDIELKAARSGGAGGQNVNKVETAI 292

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +  + E+SQ QN+ RA ++LRA+LY+++ +         R LQ+G+G RS
Sbjct: 293 DLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQESIRTQRLLQVGTGARS 352

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+   R+TDHR+ +    L   L G I+  I       Q +++   +
Sbjct: 353 EKIRTYNYKDNRVTDHRLKMNFI-LSSFLLGDIESAIQSCAALEQKELLEEMA 404


>gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D]
 gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D]
          Length = 367

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 169/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E++  +      +      +L  E  ++  ++  ++  D+      +L  + 
Sbjct: 30  DVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGAAELFELA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  I  +                    +  +     D  +C ++I+AG GG+EA 
Sbjct: 90  REEGDDETIEAIEADTAGMRAIVEDM-----EFRRMFSGPMDAANCFIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +Y   + +K EVL  S+ D  G K     + G   F  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++G  HTS +++ V PE  +  +++I   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEINPADLRVDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPTGI+V   +++SQH+NR  AM +L++RLY+ E ++      A    K  +G G  
Sbjct: 265 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|47096102|ref|ZP_00233703.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258611482|ref|ZP_05232771.2| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
 gi|258612274|ref|ZP_05269486.2| peptide chain release factor 2 [Listeria monocytogenes F6900]
 gi|293596674|ref|ZP_05263420.2| peptide chain release factor 2 [Listeria monocytogenes J2818]
 gi|47015563|gb|EAL06495.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258600468|gb|EEW13793.1| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
 gi|258610392|gb|EEW23000.1| peptide chain release factor 2 [Listeria monocytogenes F6900]
 gi|293591414|gb|EFF99748.1| peptide chain release factor 2 [Listeria monocytogenes J2818]
          Length = 338

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 183/344 (53%), Gaps = 16/344 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGD 68
           ++ R AE+E +M +    +      +     +        +   ++E++ +     ++ +
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +    +L +     +              L+  D  D  + ILE+  G GG+E+  +
Sbjct: 61  EADEDLQEELEKDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+T
Sbjct: 176 SPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMT 235

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           HIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    
Sbjct: 236 HIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---S 292

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F     + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 QIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|313678884|ref|YP_004056624.1| peptide chain release factor 1 [Mycoplasma bovis PG45]
 gi|312950243|gb|ADR24838.1| peptide chain release factor 1 [Mycoplasma bovis PG45]
          Length = 358

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 141/361 (39%), Positives = 228/361 (63%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M    +K + ++K  + E+  ++ +   ++   +   + +E A I  I  K   Y+   +
Sbjct: 1   MEKTMYKSLSEIKQSYLELLKKVDDPAVINNIKEYSAINKEIAKIREISEKFITYENLLK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++   + +    + A++ +     ++ ELE ++  L+LP+D +DDK+ I+EIR
Sbjct: 61  DVEQAKLMLESKSDEE--VEFAKMIIDENSLKLEELEEKLKILILPQDENDDKNIIVEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +F GDLFRMY ++A    +++++LS++  + GG+ +IV +I G   +S+ K
Sbjct: 119 GAAGGDEANIFAGDLFRMYNKFADELGFRLKILSTNSANAGGFSQIVFSIKGEKAYSKFK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GR+HTS  TV V+PE  +  D++I   D++ID  R+SG+GGQ 
Sbjct: 179 FESGVHRVQRVPVTESQGRIHTSTTTVTVMPEIDDTVDIEIKPSDLKIDVFRSSGAGGQS 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PT I+V +  E+SQ  NR  A+ +L+++LYD+E ++ A+E S  RKL
Sbjct: 239 VNTTDSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKADEESGYRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             G GDRSE+IRTYN+ Q R+TDHRI+ +   L+ +++G +  I+  LL   Q + I  +
Sbjct: 299 A-GHGDRSEKIRTYNYPQDRVTDHRISFSTS-LKPIMEGKLTPIVEALLAEEQNQKIKES 356

Query: 356 S 356
            
Sbjct: 357 G 357


>gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 349

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    D   K   L +E   +  +++ ++  +       +L  + 
Sbjct: 12  DVKSRRLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNTNITGAIELFDMA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +    I  + Q       +   +L  ++ +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 72  KEESDFETIAAIEQD-----VQSYSKLIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTEAC 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+R Y +Y   + +K E+L  SD D  G K     + G   +  ++ E+GVHR+ 
Sbjct: 127 DWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHRLV 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++S   HTS A++ V PE  +  ++D+   DIR DT RASG+GGQH+N TDSAVR
Sbjct: 187 RKSPFDSSNGRHTSFASIYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTDSAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH+PTGI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G  
Sbjct: 247 LTHLPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWG-- 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 305 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 347


>gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
 gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
 gi|81749553|sp|Q8FQ31|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens
           YS-314]
 gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
          Length = 358

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 143/356 (40%), Positives = 216/356 (60%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+   +  +E +M++    +      ++ + Y+ + PII+      Q + + +    +
Sbjct: 8   VDDILAEYHGLEEQMADPALHNDPAAARRVGKRYSELQPIINVHRQLVQVRDDLEAAREM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +  +   +  ++E++ +E+++ +L       L P+D  D    ++EI+AG GG EA
Sbjct: 68  AHEDHEFAAEAERLEVELVELEEKLADL-------LAPRDEHDGDDIVMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMY++YA    + +EVL S+++D GG K+I  +I  R       +S+ KFE 
Sbjct: 121 ALFAGDLLRMYQKYADKHGFIIEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E  DV+I  ++IR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKEIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V    E+SQ QNR RAM+VL ARL  ++++    E +  R  QI 
Sbjct: 241 TDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLAARLQALQKEEADAEAAEGRASQIR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYN+ + RI+DHRI      L+ VL G +DD+   L  A +A+ + +
Sbjct: 301 TMDRSERIRTYNWPENRISDHRIGFKANNLDAVLNGELDDLFTALRAAERAERLEA 356


>gi|319428670|gb|ADV56693.1| peptide chain release factor [Phaseolus vulgaris]
          Length = 498

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 129/323 (39%), Positives = 203/323 (62%), Gaps = 9/323 (2%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           ++++   V     Y KL +  A +  ++S    +   ++  ++   +  D  +D ++ ++
Sbjct: 138 KLADPDVVSDPKEYQKLAQSVAELDEVVSIYRKFKDCEKHLEEAKALAKDGGNDEDMVEM 197

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+  + K++ ELE+ +  LLLP D  D ++ ++E+RAGTGG EA ++ GDL RMYER
Sbjct: 198 ISFEIDLLSKQLAELEDNLKVLLLPSDPLDARNIMIEVRAGTGGDEAGIWAGDLVRMYER 257

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y+    WK  ++SSS  + GG+K  V  I G  V+S++K+ESGVHRVQRVP TEA GRVH
Sbjct: 258 YSERNSWKYSLVSSSAAEKGGFKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTEAQGRVH 317

Query: 199 TSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTS 257
           TS ATVA++PE  E++V I  +DI + T R+ G+GGQ+VN  ++A+ + H PTGI +  +
Sbjct: 318 TSTATVAIMPEVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFCT 377

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRIT 317
            E++Q +N+ RA ++LRA+LY+++ +         RK Q+G+G R+E+IRTYN+   R+T
Sbjct: 378 EERTQLKNKNRAFQLLRAKLYEIKLREQQESLRNQRKSQVGTGARAEKIRTYNYKDNRVT 437

Query: 318 DHR--INLTLYKLEYVLQGYIDD 338
           DHR   N     L   L G I+D
Sbjct: 438 DHRLKTNYE---LTSFLDGDIED 457


>gi|223997436|ref|XP_002288391.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975499|gb|EED93827.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 366

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 145/357 (40%), Positives = 222/357 (62%), Gaps = 5/357 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  ++  F  +  R+++   +       ++ ++ +     +     Y Q + E + 
Sbjct: 7   MKSRLDGIRRSFQALTERLADPDVIADSNLLRQVMKDRSQSEETVQAFDEYCQLETELEG 66

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  +   D E+R++A+ E+  IE  + ELE  I  LLLPKD +DD++C+LEIRAGTG
Sbjct: 67  AQELFQEAGDDVEMREMARSEMKEIEVRLDELETLIKILLLPKDPNDDRNCMLEIRAGTG 126

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           GSEA +F GDL  +Y ++ +   W+V ++ SS  DDGGYK +V  + G  V+S++K+E+G
Sbjct: 127 GSEANIFAGDLLDVYRKFMSAEGWQVSMMDSSPGDDGGYKNVVLEVKGDSVYSKLKWEAG 186

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVPATE  GRVHTS ATVA++PE  E+DV I  +DI + TMR+ G+GGQ+VN  +
Sbjct: 187 VHRVQRVPATETQGRVHTSTATVAIMPECDEVDVKIDPKDIEMSTMRSGGAGGQNVNKVE 246

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +AV + H PTGI +  + E+SQ +N+  AMK+L ARLYD+E ++   E    R +QIG+G
Sbjct: 247 TAVDLLHKPTGIRIKCTQERSQLKNKELAMKMLMARLYDIENEKREAEERERRGVQIGTG 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            RSE+IRTYN+   R++DHR+    + L+  L G +  II+ L+   Q   +   SE
Sbjct: 307 GRSEKIRTYNWKDSRVSDHRLG-QNFPLQNFLSGDVGPIIDGLIIKDQEAKLRQLSE 362


>gi|159039554|ref|YP_001538807.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
 gi|157918389|gb|ABV99816.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
          Length = 362

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 155/365 (42%), Positives = 215/365 (58%), Gaps = 18/365 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +S +++  L + +A++E R+++           ++   YA + P         +   E +
Sbjct: 1   MSSERLAALLDEYADLEKRLADPAIHADQNMARRVGRRYAELVP-------LHKAASELE 53

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
                +      +        E  A+   +  LE  +  LL+P+D  D K  I+EI+AG 
Sbjct: 54  QARADLAAAKELAAEDPAFVGEAEAMAAALPALEEGLAELLIPRDPHDAKDVIVEIKAGE 113

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-------RGVF 173
           GG E+ALF GDL RMY RYA    W VEV+ + D+D GG K++   I          GV+
Sbjct: 114 GGEESALFAGDLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVW 173

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           SR+K+E GVHRVQRVP TE+ GR+HTSAA V +LPEA E+DV I   ++RID  R+SG G
Sbjct: 174 SRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLMLPEAEEVDVTIDPNELRIDVFRSSGPG 233

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI+V   +EKSQ QNR +A+++LRARL  V +++     S  
Sbjct: 234 GQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQALRILRARLLAVAQEQADAAASDA 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           RK Q+ + DRSERIRTYNF Q RITDHRI  T Y L+  L G +D ++  L  A +A  +
Sbjct: 294 RKAQVRTVDRSERIRTYNFPQNRITDHRIGYTAYNLDLALAGELDGVLAALAEADRAARL 353

Query: 353 GSASE 357
              +E
Sbjct: 354 AGEAE 358


>gi|224503251|ref|ZP_03671558.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561]
          Length = 338

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 183/344 (53%), Gaps = 16/344 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGD 68
           ++ R AE+E +M +    +      +     +        +   ++E++ +     ++ +
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +    +L +     +              L+  D  D  + ILE+  G GG+E+  +
Sbjct: 61  EADEDLQEELEKDIKAYMATISA-----FELKLMLSDPYDKNNAILELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+T
Sbjct: 176 SPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMT 235

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           HIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    
Sbjct: 236 HIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---S 292

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F     + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 QIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|319942340|ref|ZP_08016655.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B]
 gi|319804213|gb|EFW01113.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B]
          Length = 354

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 15/345 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +     R  E+   +      +      ++++E   +  I+   +   Q   +  +L  
Sbjct: 8   DVDRKARRLEEVNREIENPDLWNDPKHAQEVSKEKKMLDDIVGSFNRLTQGIADAGELFE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D +  ++   +V  IE E+ +LE    +  +     D  +C LEI++G GG+E
Sbjct: 68  L-SLAEEDFDSLEVIGEDVDRIEHEVAQLE----FKRMFNQPMDSANCYLEIQSGAGGTE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY RYA  + +KV +   +  +  G K     I G   +  ++ E+G+HR
Sbjct: 123 AQDWASMLERMYMRYAERKGFKVTLEEETPGEVAGIKSCTLFIEGEWAYGTLRTETGIHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +A+ R HTS  +V V PE  +  D++I   D+ ID  RASG+GGQH+  T+SA
Sbjct: 183 LVRKSPFDANARRHTSFTSVYVYPEVDDSIDIEINPADLSIDVFRASGAGGQHIQKTESA 242

Query: 244 VRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSG 300
           VRI H PTGI+ +   ++SQH+NR +AM+ L+A+LY++E ++    ++     K  IG G
Sbjct: 243 VRIHHKPTGIITICQDDRSQHRNREKAMQQLKAKLYELEMRKRMEAQTKLEESKSDIGWG 302

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y   Q R+ D R  +       VL G +D  I   L 
Sbjct: 303 ---HQIRSYVLDQSRVKDLRTGVETGNTGGVLDGDLDQFIEASLK 344


>gi|297583381|ref|YP_003699161.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
 gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
          Length = 366

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 186/347 (53%), Gaps = 14/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            + + + + A +E RM++    D   +  +     + + S    Y + +   +DL     
Sbjct: 25  DLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSYAHTYRELEAAHEDLEVQFG 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  +D E+    +  +  ++K + + E +    LL     D  + ILE+  G GG+E+
Sbjct: 85  LLEEENDPEMMADLEAGIEDLQKRLNQFELQ----LLLSGPYDANNAILELHPGAGGTES 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A    WKVE L     D+ G K +   I+G   +  +K E GVHR+
Sbjct: 141 QDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQITGHNAYGHLKAEKGVHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE   +I++D+  +++RIDT R+SG+GGQHVNTTDSAV
Sbjct: 201 VRISPFDSSGRRHTSFVSCDVMPELNEDIEIDVKPDELRIDTFRSSGAGGQHVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           R+TH+PT  +V   SE+SQ +NR +AMK+L+A+L+ +E +R   E    R  + +IG G 
Sbjct: 261 RMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQRQEADEIRGEQSEIGWG- 319

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N      + V+ G +   I+  L + 
Sbjct: 320 --SQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYLRSQ 364


>gi|170725301|ref|YP_001759327.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908]
 gi|238688657|sp|B1KFR6|RF2_SHEWM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169810648|gb|ACA85232.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908]
          Length = 365

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 172/343 (50%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +  S   +       L +E +A+  ++  I   D   ++ + L  + 
Sbjct: 28  DAKKERLEEVSAELESSEVWNNPENAQALGKERSALELVVKTIDDMDSGLEDVEGLVELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    D +       ++        + +  +     D   C L+I++G+GG+EA 
Sbjct: 88  VEEEDEETFADASSELDALEKRLEE-----LEFRRMFSGPHDISDCYLDIQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RM+ R+     +K E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 143 DWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG+ HTS  +V V PE  +  ++DI   D+RIDT RASG+GGQHVN T+SA+R
Sbjct: 203 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAIR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+NR  AMK L+A+LY++E   +    +++ + K  IG G  
Sbjct: 263 ITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQQAEDAKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 362


>gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
           sp. 2_1_36FAA]
 gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
           sp. 2_1_36FAA]
          Length = 347

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 187/345 (54%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E +M+E    D  I   +    ++ +      + Q      +   ++ 
Sbjct: 8   DLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLD 67

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  +++  + ++  +EK +   E      LL  +  D+ + ILEI  G+GG+EA  
Sbjct: 68  FLAEDDSVQEELEEKLAELEKMMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQD 123

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R
Sbjct: 124 WGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVR 183

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+
Sbjct: 184 ISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRL 243

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G   
Sbjct: 244 THIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWG--- 300

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y F+    + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 301 SQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 345


>gi|152980486|ref|YP_001352951.1| peptide chain release factor 2 [Janthinobacterium sp. Marseille]
 gi|166223628|sp|A6SXF4|RF2_JANMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151280563|gb|ABR88973.1| RF-2 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 367

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                +  ++   + +    +       L +E  ++  I+  +   D +  + +DL  + 
Sbjct: 30  DVKSEKLDQVNGELEDPDVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELNDARDLFEMA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  I  +         +E+ +L   + +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  REEKDEDTIVAIEND-----AQELLKLVEGMEFRRMFSNPMDANNCFIDIQAGAGGTEAQ 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +KVE+L  SD +  G K     + G   +  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLRYCERKGFKVEILEQSDGEVAGIKTATLKVEGDYAYGFLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++   HTS +++ V PE  +  ++DI   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSANGRHTSFSSLFVYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH P+GI+V   +++SQH+N+  A  +L+A+L+++E +   +E+    + K  +G G  
Sbjct: 265 LTHGPSGIVVQCQNDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N      + VL G +DD I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNFETGNTKAVLDGDLDDFIAASLKQ 365


>gi|302390246|ref|YP_003826067.1| bacterial peptide chain release factor 2 (bRF-2)
           [Thermosediminibacter oceani DSM 16646]
 gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2)
           [Thermosediminibacter oceani DSM 16646]
          Length = 365

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 189/348 (54%), Gaps = 10/348 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                +I  LK+  A++E +       D      +    ++ +   +  ++  K++ +DL
Sbjct: 19  MRDALEIDRLKSEIAQLEEKTLTPNFWDDAQAAQKILQTLNQLKETVEKFEAIKKKWEDL 78

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            T+I     D +  +    E+ A  +E ++   E+    L +   D  + IL + AG GG
Sbjct: 79  MTLIELGIEDHD--EGLYGEISAEAEEFKKEFEEMRLKTLLRGRYDKNNAILSLHAGAGG 136

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +V  L RMY R+A  + +KV+VL     ++ G K     + G   +  +K E GV
Sbjct: 137 TEAQDWVQMLLRMYTRWAEDKGYKVKVLDMLPGEEAGIKSATILVEGPYAYGYLKSEQGV 196

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A+V V+PE  +  +V+I  ED++I+T R+ G+GGQ+VN T+
Sbjct: 197 HRLVRISPFDAAGRRHTSFASVDVIPEIEDDIEVEIKPEDLKIETFRSGGAGGQYVNKTE 256

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRITHIPTGI+V   +E+SQ  NR  AMK+LRA+L+++  +    + +  R  Q  I 
Sbjct: 257 SAVRITHIPTGIVVTCQNERSQQSNRNTAMKLLRAKLFNLYLEEQQKKINELRGEQKEIA 316

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            G+   +IR+Y F     + DHR N+ +  ++ V+ G ID  IN  L 
Sbjct: 317 WGN---QIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDMFINAYLK 361


>gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 368

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 180/350 (51%), Gaps = 12/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
                 I  +K    EI+ +MS+        K   L ++  A+  ++ + +    K ++ 
Sbjct: 19  MGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDL 78

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  +  +   +S   ++ +      +K        +    L     D  + IL I AG
Sbjct: 79  STLIELGLEEGDESITDEVDKEYKELKKKLED-----LKIKTLLNGPYDKNNAILSIHAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           +GG+EA  +   L RMY R+A  + ++VE L     ++ G K +   I G   +  +K E
Sbjct: 134 SGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           +GVHR+ R+   +A+GR HTS A V VLPE   +I+V+I  ED++IDT RASG+GGQ+VN
Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVN 253

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T+SAVRITH+PTGI+V   SE+SQ QNR  AMK+L+A+L D+  K    +     K + 
Sbjct: 254 KTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEH 312

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                  +IR+Y F     + DHR N  +  ++ V+ G ID  IN  L  
Sbjct: 313 REAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQ 362


>gi|306835871|ref|ZP_07468866.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
           49726]
 gi|304568236|gb|EFM43806.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
           49726]
          Length = 358

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 148/358 (41%), Positives = 212/358 (59%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  IE++M +        A+ KL++ YA + PII       Q +++  D   +
Sbjct: 8   VDDIVSEYQGIEMQMGDPEIAGDQQAFRKLSKRYAELRPIIKVNEELTQAREDLADAKEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +   E  D        +   + ELE ++  LL P+D  D +  I+EI+AG GG EA
Sbjct: 68  AYEDHDFQEEAD-------RLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-----GRGVFSRMKFES 180
           ALF GDL RMYER+A    +K EVL  +++D GG K++  +         G +S  KFE 
Sbjct: 121 ALFAGDLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E++  +I  +DIR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QN+ RA++VL+ARL  +ER+    E    R  Q+ 
Sbjct: 241 TDSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSER+RTYN+ + RITDHRI      L+ VL G + D+I  L    +A+ + +  
Sbjct: 301 TMDRSERVRTYNWPENRITDHRIGYKANNLDSVLNGDMQDLIKALQDQERAERLEAEG 358


>gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
          Length = 331

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 101/335 (30%), Positives = 174/335 (51%), Gaps = 15/335 (4%)

Query: 18  EIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           E+   + +    +      +L  E  ++  ++  +        +  +L  +  +   D+ 
Sbjct: 2   EVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMSREEGDDAT 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +      + ++        + +  +  +  D  +C ++I+AG GG+EA  +   L R
Sbjct: 62  CEAIEADVEKSADEVEA-----LEFRRMFSNPLDPSNCFIDIQAGAGGTEACDWASMLLR 116

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
            Y RY   + +K EV+  ++ D  G +     + G   + +++ E+GVHR+ R    ++S
Sbjct: 117 QYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLVRKSPFDSS 176

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           G  HTS A+V V PE  +  ++DI   D+R DT RASG+GGQH+N TDSAVR+THIPTGI
Sbjct: 177 GGRHTSFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGI 236

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYN 310
           +V   +++SQH+NR  A ++LR+RLY+ E ++   E+    + K  +G G    +IR+Y 
Sbjct: 237 VVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKSDVGWG---HQIRSYV 293

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             Q RI D R N+ +   + VL G +D+ I   L 
Sbjct: 294 LDQSRIKDLRTNVEISNTQKVLDGDLDEFITASLK 328


>gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
 gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
 gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99]
          Length = 338

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 183/344 (53%), Gaps = 16/344 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGD 68
           ++ R AE+E +M +    +      +     +        +   ++E++ +     ++ +
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +    +L +     +              L+  D  D  + ILE+  G GG+E+  +
Sbjct: 61  EADEDLQEELEKDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+T
Sbjct: 176 SPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMT 235

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           HIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    
Sbjct: 236 HIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---S 292

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F     + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 QIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|325186400|emb|CCA20906.1| peptide chain release factor 1 putative [Albugo laibachii Nc14]
          Length = 397

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 164/359 (45%), Positives = 229/359 (63%), Gaps = 9/359 (2%)

Query: 6   HKQICDLKNRFAEIELRMSES-PSVDAY--IKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           H  +  L  R   +  ++      + ++    L+ E A ++P ++ I       Q   +L
Sbjct: 37  HTNMNLLLERHKSLSEQLYSPQGKMSSFVLKNLSIELAELTPKVTTIQKLQSTLQTIDEL 96

Query: 63  HTVIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
             ++   +  +D E+  LA+ E+   +++   LE  +   LLP+D  DDK+CILEIRAGT
Sbjct: 97  SEILASPSSQNDKELIQLAKEELQEAKEDAIALEKSLTRQLLPRDPADDKNCILEIRAGT 156

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA LF  DL ++Y++ A +R W  ++LS S  D GG KE V TI GRGV+ + KFES
Sbjct: 157 GGEEACLFANDLLKLYQKIAIMRNWHFQILSISHTDLGGCKECVCTIQGRGVYGQTKFES 216

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP  +   RVHTSA +V VLPE  EI++++  +++RID  RASGSGGQHVNTT
Sbjct: 217 GVHRVQRVPINDV--RVHTSAVSVVVLPEIEEIEMELNPKELRIDVYRASGSGGQHVNTT 274

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITHIPTGI      E+SQHQN+ +AM +LRAR+YD  R +  ++R   R LQIGS
Sbjct: 275 ESAVRITHIPTGIQAAVQDERSQHQNKAKAMSILRARVYDQMRDQRDSKRHQLRSLQIGS 334

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSASE 357
           GDRSERIRTYNF Q R++DHR+N+TLY +E  L G + D +++ L+   Q  M+    +
Sbjct: 335 GDRSERIRTYNFPQSRVSDHRVNVTLYGIERFLNGELMDPLVDALVLDEQNNMLEELQD 393


>gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
 gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
          Length = 368

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 180/345 (52%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I  +K    EI+ +MS+        K   L ++  A+  ++ + +    K ++   L  
Sbjct: 24  DIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   +S   ++ +      +K        +    L     D  + IL I AG+GG+E
Sbjct: 84  LGLEEGDESITDEVDKEYKELKKKLED-----LKIKTLLNGLYDKNNAILSIHAGSGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A  + ++VE L     ++ G K +   I G   +  +K E+GVHR
Sbjct: 139 AQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+GR HTS A V VLPE   +I+V+I  ED++IDT RASG+GGQ+VN T+SA
Sbjct: 199 LVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESA 258

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V   SE+SQ QNR  AMK+L+A+L D+  K    +     K +      
Sbjct: 259 VRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEHREAAW 317

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y F     + DHR N  +  ++ V+ G ID  IN  L  
Sbjct: 318 GNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQ 362


>gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 349

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  EI   + +    D   K   L +E   +  I++ ++  +       +L  + 
Sbjct: 12  DVKSRRLTEINSILEDPTIWDDQKKAQALGKEKKLLDGIVATLTDLNTNITSALELFDMA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +    I  + Q       +   ++  ++ +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 72  KEESDFETIAAIEQD-----VEGYSKIIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTEAC 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+R Y +Y   + +K E+L  SD D  G K     + G   +  ++ E+GVHR+ 
Sbjct: 127 DWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHRLV 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++S   HTS A++ V PE  +  ++++   DIR DT RASG+GGQH+N TDSAVR
Sbjct: 187 RKSPFDSSNGRHTSFASIYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTDSAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G  
Sbjct: 247 LTHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWG-- 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 305 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 347


>gi|253997054|ref|YP_003049118.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
 gi|253983733|gb|ACT48591.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
          Length = 367

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    D   K   L +E   +  +++ +       ++ Q+L  + 
Sbjct: 30  ESKSQRLEEVNGLLEDPKIWDDNAKSQALGKEKRTLELVVNTLIHVQGGLKDAQELFEMA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N D  +  +    +   ++          +  +     D  +C +E ++G+GG+EA 
Sbjct: 90  REENDDDTLLSVEHDSLALEKEIAEM-----EFRRMFSGELDSANCFIEFQSGSGGTEAQ 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RY   + +KVEVL  S+ D  G K     +SG   +  ++ E+GVHR+ 
Sbjct: 145 DWANMLLRMYLRYCERKGFKVEVLEESEGDVAGIKGASIKVSGDYAYGTLRTENGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ + HTS A+V + PE  +  ++DI   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSNAKRHTSFASVQIFPEVDDSIEIDINPADLRVDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPT  +V   +++SQH+NR  AM +L+  LY++E  +   E+ A    K  IG G  
Sbjct: 265 ITHIPTNTVVQCQNDRSQHRNREEAMNMLKGALYNLELNKRNQEKQALEDAKTDIGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R  + +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTGVEIGNTQGVLDGDLDPFITESLKQ 365


>gi|224499863|ref|ZP_03668212.1| peptide chain release factor 2 [Listeria monocytogenes Finland
           1988]
 gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
 gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
 gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
 gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
          Length = 338

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 183/344 (53%), Gaps = 16/344 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGD 68
           ++ R AE+E +M +    +      +     +        +   ++E++ +     ++ +
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +    +L +     +              L+  D  D  + ILE+  G GG+E+  +
Sbjct: 61  EADEDLQEELEKDIKAYMATISA-----FELKLMLSDPYDKNNAILELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+T
Sbjct: 176 SPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMT 235

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           HIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    
Sbjct: 236 HIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---S 292

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F     + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 QIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|227501694|ref|ZP_03931743.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
           49725]
 gi|227077719|gb|EEI15682.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
           49725]
          Length = 352

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 149/358 (41%), Positives = 212/358 (59%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  IE++M +        A+ KL++ YA + PII       Q +++  D   +
Sbjct: 2   VDDIVSEYQGIEMQMGDPEIAGDQQAFRKLSKRYAELRPIIKVNEELTQAREDLADAKEM 61

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +   E  D        +   + ELE ++  LL P+D  D +  I+EI+AG GG EA
Sbjct: 62  AYEDHDFQEEAD-------RLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEA 114

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-----GRGVFSRMKFES 180
           ALF GDL RMYER+A    +K EVL  +++D GG K++  +         G +S  KFE 
Sbjct: 115 ALFAGDLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEG 174

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E++  +I  +DIR+D  R+SG GGQ VNT
Sbjct: 175 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNT 234

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QN+ RA++VL+ARL  +ER+    E    R  Q+ 
Sbjct: 235 TDSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVR 294

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSER+RTYN+ + RITDHRI      L+ VL G + D+I  L    +A+ + S  
Sbjct: 295 TMDRSERVRTYNWPENRITDHRIGYKANNLDSVLNGDMQDLIKALQDQERAERLESEG 352


>gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes Clip81459]
 gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
 gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
 gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
 gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
 gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
 gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
 gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
 gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
 gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott
           A]
          Length = 338

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 183/344 (53%), Gaps = 16/344 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGD 68
           ++ R AE+E +M +    +      +     +        +   ++E++ +     ++ +
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +    +L +     +              L+  D  D  + ILE+  G GG+E+  +
Sbjct: 61  EADEDLQEELEKDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+T
Sbjct: 176 SPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMT 235

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           HIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    
Sbjct: 236 HIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---S 292

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F     + DHR N     ++ V+ G +D+ IN  L + 
Sbjct: 293 QIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 336


>gi|3522941|gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 395

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 163/384 (42%), Positives = 244/384 (63%), Gaps = 28/384 (7%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKK--- 56
           ++ +  +++  +++R A ++  +++   S + + +  +E   +   +  I+    K+   
Sbjct: 9   LIKIMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRANKELRKLRDSMLLINDLRAKQKVV 68

Query: 57  ----------------------QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
                                 QE   L +++ + + D ++ DLA  E+    +E + L+
Sbjct: 69  NLLYRIIYLFQRSSLIRFTFCWQEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQ 128

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
             +   LLPKD  D++ CILE+RAGTGG EA+LF  D+FRMYERY+  + WK +++  ++
Sbjct: 129 TLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITE 188

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID 214
           +D  GYKE  A I G  V+ ++KFESG+HRVQR+P TE SGR+HTSA +VA+LP+A E+D
Sbjct: 189 SDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVD 248

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVL 273
           V +  ED+RIDT R+ GSGGQH NTT+SAVRI H+PTG+MV+   E+SQH NR +A+KVL
Sbjct: 249 VQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVL 308

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
            ARLY++ER R+ + RS  R  QIGSGDRS RIRTYNF QGR+TDHR+ +T + +E ++Q
Sbjct: 309 CARLYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQ 368

Query: 334 GY-IDDIINPLLTAHQAKMIGSAS 356
           G  +D  I+ LL   +   I S S
Sbjct: 369 GENLDMFIDALLLRQEMDAIASFS 392


>gi|301094068|ref|XP_002997878.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
 gi|262109801|gb|EEY67853.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
          Length = 366

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 164/359 (45%), Positives = 236/359 (65%), Gaps = 12/359 (3%)

Query: 8   QICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+  L  R+ E+   +S +    S D    L+ E A + P +  +     +++  ++L  
Sbjct: 8   QMDLLGRRYDELAHELSHNDGSFSSDKITNLSIEMAELEPKVIAVRELQSQEKAVEELDE 67

Query: 65  VIGDHNSDSEI-----RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +I +     E      R +A+ E   + + I  LE E+  L+LP+D  DDKS ILEIRAG
Sbjct: 68  MINEQADSDEPDALELRHMAEEERRELLEAIINLEGEVVRLMLPRDEADDKSSILEIRAG 127

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           +GG EA LF GD+ +MY++ A  + WK E++S S+ D GG KE V +++GRG + RMKFE
Sbjct: 128 SGGDEACLFAGDILKMYQKVALAKGWKFELMSISETDLGGVKECVCSLTGRGAYGRMKFE 187

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP  +   RVHTSA +V VLPEA E++V+I  +D+RID  RASG+GGQHVNT
Sbjct: 188 SGVHRVQRVPVNDV--RVHTSAVSVVVLPEAEEVEVEIDPKDLRIDVYRASGAGGQHVNT 245

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRITHIPTGI+     E+SQHQN+ +A+K+LRAR++D  R++   ER   R  Q+G
Sbjct: 246 TESAVRITHIPTGIVAAVQDERSQHQNKAKALKILRARVFDGIRRKRDAERQTMRNSQVG 305

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           SGDRSER+RTYNF Q R++DHR+N+T++ +E +L G  +D+I++ L+   Q  ++    
Sbjct: 306 SGDRSERVRTYNFPQSRVSDHRVNVTVFGIERMLNGELLDEIVDALVVDEQNLLLQQLE 364


>gi|212697120|ref|ZP_03305248.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675895|gb|EEB35502.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 263

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 146/262 (55%), Positives = 192/262 (73%), Gaps = 1/262 (0%)

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
           +  LL+P+D +D K  I+EIRAG GG EA LF G+L+RMY  YA  + +K E +  S   
Sbjct: 1   MKILLIPQDPNDHKDVIVEIRAGAGGEEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQG 60

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD 216
            GG KE    + G G +S++K+ESGVHRVQRVP TE+ GR+HTS ATVAVLPEA E+D+ 
Sbjct: 61  IGGMKEATFIVRGEGAYSKLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEADEVDIK 120

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           I   DIR D  R+SG+GGQ VNTTDSAVR+THIPTG++V    EKSQ +N+ +AM+VLRA
Sbjct: 121 IDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRA 180

Query: 276 RLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY 335
           RLY++E ++   E S NRK Q+G+GDRSERIRTYN+ QGRITDHRIN T+Y+L+  L G 
Sbjct: 181 RLYEMEEEKRQKEISDNRKSQVGTGDRSERIRTYNYPQGRITDHRINKTIYQLDDFLDGN 240

Query: 336 IDDIINPLLTAHQAKMIGSASE 357
           I+++I+ L+T  Q + + +  E
Sbjct: 241 IEEMIDSLITEDQTRKLKTMGE 262


>gi|260906196|ref|ZP_05914518.1| peptide chain release factor 1 [Brevibacterium linens BL2]
          Length = 359

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 139/366 (37%), Positives = 199/366 (54%), Gaps = 18/366 (4%)

Query: 3   FLSHKQICD----LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQK 55
                 +      L +  A ++  +S+           KLT  YA +  +      + Q 
Sbjct: 1   MADDDTLKASVSALLDEHARLQSELSDPAVHADAGRAKKLTRRYAELDKVAVTARHFAQL 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           +++              ++       E   +  E  ++E E+  LL+P D DD +  I+E
Sbjct: 61  EEDA-------AAAEELADDDAEFGAEAKRLHAEAADVETELRDLLVPSDPDDARDAIIE 113

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA--TISGRGVF 173
           I+AG GG E+ALF GDL RMY+R+   R W  ++L ++ +D GGYK++         G +
Sbjct: 114 IKAGEGGDESALFAGDLLRMYQRWIDSRGWSSQILDATHSDLGGYKDVTLALKAKDDGAY 173

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGS 232
             +KFE GVHRVQRVP TE+ GR+HTSAA V V PE  E +       D+RID  R+SG 
Sbjct: 174 GWVKFEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVALDDNDLRIDVYRSSGP 233

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQ VNTTDSAVRITH+PTGI     +EKSQ QN+  A+++LRAR+   + +  A E + 
Sbjct: 234 GGQSVNTTDSAVRITHVPTGITASCQNEKSQLQNKEAALRMLRARILAKQAEEAAAEAAD 293

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            R+ Q+ + DRSERIRTYNF + RITDHR     Y L+ VL G +D +I     A +A  
Sbjct: 294 IRRSQVRTVDRSERIRTYNFPENRITDHRTGYKAYNLDQVLAGELDPVIGSCREADKAAR 353

Query: 352 IGSASE 357
           + +  +
Sbjct: 354 LDALGD 359


>gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 342

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 173/339 (51%), Gaps = 7/339 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     D   +  +  + ++ + S +    + +   QD    +     + +    A+  
Sbjct: 1   MAAPDFWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEAN 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
            LA + +    E      ++     D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 61  RLAEQLKSEMDE--FELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAED 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEVL     ++ G K +   I G   +  +K E GVHR+ R+   +ASGR HTS A
Sbjct: 119 HGYKVEVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFA 178

Query: 203 TVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           +V V+PE    +  ++I  E++RIDT R++G+GGQHVNTTDSAVRITHIPTGI+V   SE
Sbjct: 179 SVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSE 238

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQ QNR RAM++L++RL    R+    E +  R  Q        +IR+Y F     + D
Sbjct: 239 RSQIQNRARAMEILKSRLAAKRREEREQELAQLRGEQ-KEIAWGSQIRSYVFHPYSLVKD 297

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           HR N      + V+ G ID  I+  L    A+     +E
Sbjct: 298 HRTNYETSNTQAVMDGEIDPFIHAYLRWQLAREQQRENE 336


>gi|118619169|ref|YP_907501.1| peptide chain release factor 1 [Mycobacterium ulcerans Agy99]
 gi|166223575|sp|A0PUL1|RF1_MYCUA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118571279|gb|ABL06030.1| peptide chain release factor 1 PrfA [Mycobacterium ulcerans Agy99]
          Length = 357

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 145/340 (42%), Positives = 201/340 (59%), Gaps = 17/340 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + I  L    A++E  +++       D   K    +A ++ I++        +++ + 
Sbjct: 4   PVQTIDVLLAEHADLERALADPELHSRPDEARKAGRRFARLARIVATYRKLVAAREDLET 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
            H +     S          E   +E  + EL++++  +L P+D  D    +LE+++G G
Sbjct: 64  AHELAATDES-------FVAEAAELEARVAELDSQLTDMLAPRDPHDADDIVLEVKSGEG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-----SGRGVFSRM 176
           G E+ALF  DL RMY RYA    W V VL  + +D GGY++    I     +  GV+SRM
Sbjct: 117 GEESALFAADLARMYIRYAERHGWTVTVLGETTSDLGGYRDATLAIASKGDTADGVWSRM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GRVHTSAA V V PE  E+ +V I   D+RID  R+SG GGQ
Sbjct: 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQ 236

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTGI+V   +E+SQ QN++RAM+VL ARL  +  +R   + SA+R 
Sbjct: 237 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEERAMADASADRA 296

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
            QI + DRSERIRTYNF + R+TDHRI    + L+ VL G
Sbjct: 297 SQIRTVDRSERIRTYNFPENRVTDHRIGYKSHNLDQVLDG 336


>gi|116494437|ref|YP_806171.1| protein chain release factor B [Lactobacillus casei ATCC 334]
 gi|227535599|ref|ZP_03965648.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631186|ref|ZP_04674217.1| peptide chain release factor 2 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301065947|ref|YP_003787970.1| protein chain release factor B [Lactobacillus casei str. Zhang]
 gi|116104587|gb|ABJ69729.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           casei ATCC 334]
 gi|227186729|gb|EEI66796.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239525651|gb|EEQ64652.1| peptide chain release factor 2 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438354|gb|ADK18120.1| Protein chain release factor B [Lactobacillus casei str. Zhang]
 gi|327381888|gb|AEA53364.1| Peptide chain release factor 2 [Lactobacillus casei LC2W]
 gi|327385049|gb|AEA56523.1| Peptide chain release factor 2 [Lactobacillus casei BD-II]
          Length = 368

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 110/352 (31%), Positives = 171/352 (48%), Gaps = 12/352 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH-- 63
           H  +  L  R  E E RM+E    D      +     + +  K   +   + E +DL   
Sbjct: 20  HFDLDALNERITENEGRMAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDLEAG 79

Query: 64  -TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D       ++         EK  +         LL     D  + ILEI  G GG
Sbjct: 80  FELLQDEPDKDLQQEEEAKIKDLQEKLDK-----YEMQLLLNGPYDHNNAILEIHPGAGG 134

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +E+  +   L RMY+R+A    +KVEV      D+ G K +   I+G   +  +K E GV
Sbjct: 135 TESQDWGSMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGV 194

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +++GR HTS A+V V+PE    I+VD+  EDI+++  R+SG+GGQH+N T 
Sbjct: 195 HRLVRISPFDSAGRRHTSFASVDVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTS 254

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+ H+PTGI+  + +++SQ QN+  AM +L+A+LY  E +    +  A +  Q    
Sbjct: 255 SAVRLIHLPTGIVTSSQAQRSQFQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQ-KDV 313

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
               +IR+Y F     + DHR N        V+ G ++  IN  L    A+ 
Sbjct: 314 AFGSQIRSYVFHPYTMVKDHRTNYETGNGNAVMDGDLNPFINAYLQWELAQK 365


>gi|77359475|ref|YP_339050.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|123589557|sp|Q3ILD8|RF2_PSEHT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76874386|emb|CAI85607.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 365

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 178/341 (52%), Gaps = 15/341 (4%)

Query: 12  LKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            + R  E+   + +S   +       L  E +A+  ++  I        + + L  +  +
Sbjct: 30  KQERLEEVNAELEDSAVWNEPERAQALGREKSALEAVVETIDTLVTGTDDVEGLLELAVE 89

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E  D AQ E+  + +++  LE    +  +     D     L++++G+GG+EA  +
Sbjct: 90  AE-DQETFDEAQSELADLNEQLEALE----FRRMFSGPHDSNDAYLDLQSGSGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   + +KVE++ ++  D  G K       G   +  ++ E+GVHR+ R 
Sbjct: 145 CNILLRMYLRWGEAKGFKVELVEATGGDVAGIKGATVRFVGEYAYGWLRTETGVHRLVRK 204

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS A+  V PE    I++D+   D+RID  RASG+GGQHVNTT+SAVRIT
Sbjct: 205 SPFDSSGRRHTSFASAFVYPEVDDNIEIDMNPSDLRIDVYRASGAGGQHVNTTESAVRIT 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSE 304
           H+PT  +V   +E+SQH+N+ +AMK L+A+L+++E ++   E+    + K  IG G    
Sbjct: 265 HVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDSKSDIGWG---S 321

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 322 QIRSYVLDDARIKDLRTGVESRNTQSVLDGNLDKFIEASLK 362


>gi|281208935|gb|EFA83110.1| peptide chain release factor 1 [Polysphondylium pallidum PN500]
          Length = 463

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 221/353 (62%), Gaps = 4/353 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
             ++  + N++  ++  M     S +   + + +   I   +     Y  +    ++L  
Sbjct: 107 QNKLKMMSNKYTTLKSLMESQTLSQEDIKRTSNDAQQIEESVQLFRQYVNEIGNIKELKM 166

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D   +   R++   ++ A+ +++  LE  + Y LLP D DDD + I+EIRAGTGG E
Sbjct: 167 ML-DMEKEEASREMIIEDLKAMGEQLAALEKSLIYSLLPADKDDDGNAIIEIRAGTGGGE 225

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LF  ++FRMYE YAA + W+ E L  S  D GG +E  A ISG+GVF  +K ESGVHR
Sbjct: 226 AQLFAHEMFRMYEGYAATKGWRFESLDISYTDVGGCREASAAISGKGVFGFLKNESGVHR 285

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQR+P TE  GR+HTS  TVA++PE  E+D+ I   D++ID  R+SG+GGQ VNTTDSAV
Sbjct: 286 VQRIPDTETQGRIHTSTTTVAIMPEPKEVDIKINDRDLKIDVFRSSGNGGQSVNTTDSAV 345

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RI H+PTGI V+   E+SQ QN+ +AMKVLRARLY++ER R+  ERSA R  QIG   RS
Sbjct: 346 RIVHLPTGITVSMQDERSQLQNKSKAMKVLRARLYEMERVRLQTERSAERNSQIGGATRS 405

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           ERIRTYNF Q R+TDHR+N+T   ++ ++ G  + D I  ++   Q K + + 
Sbjct: 406 ERIRTYNFPQDRVTDHRVNITTNDIDAIMTGETLGDFIEDIMLQFQTKDLNNL 458


>gi|320533186|ref|ZP_08033906.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134600|gb|EFW26828.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 340

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 140/343 (40%), Positives = 196/343 (57%), Gaps = 19/343 (5%)

Query: 24  SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEV 83
           ++  ++    +L   YA +  ++S    +     +  D+  +  +   D +         
Sbjct: 4   ADPGAM---RRLGRRYAELGRVVSAYRAWQAASADLADVRELAAE---DEDFAAEVPALE 57

Query: 84  LAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALR 143
            A       L      +L+P+D DD +  I+E++AG GG E+ALF  DL RMY RYA  +
Sbjct: 58  TAEAAAGEHL----REVLVPRDPDDARDVIIEVKAGEGGEESALFASDLARMYSRYAERQ 113

Query: 144 KWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESGVHRVQRVPATEASGR 196
            W VEVL ++D+D GGYK++   I          GV++ +K+E GVHRVQRVP TE+ GR
Sbjct: 114 GWAVEVLDATDSDLGGYKDVRLAIKTRGPTEPQDGVWAHLKYEGGVHRVQRVPVTESQGR 173

Query: 197 VHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           +HTSAA V V+PEA +     I   D+RID  R+SG GGQ VNTTDSAVRITH+PTGI+V
Sbjct: 174 IHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVV 233

Query: 256 T-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
           +  +EKSQ QN+  AM+VLRARL        A E +  R+ Q+ + DRSERIRTYNF + 
Sbjct: 234 SMQNEKSQLQNKEAAMRVLRARLLAERAAAAAAEAAQARRSQVRTVDRSERIRTYNFPEN 293

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RI DHR     Y L+ VL G +  +I   +   +A+ +    E
Sbjct: 294 RIADHRTGFKAYNLDAVLDGDLGPVIASAIAMDEAERLSQVGE 336


>gi|315080405|gb|EFT52381.1| peptide chain release factor 1 [Propionibacterium acnes HL078PA1]
          Length = 361

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 204/364 (56%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++ R  EIE ++++S  +       +L + +A +  ++S     DQ + 
Sbjct: 1   MSESAQQAIDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R V+ 
Sbjct: 114 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPVYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   ++R+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 353

Query: 354 SASE 357
              E
Sbjct: 354 QRPE 357


>gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
 gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
          Length = 386

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +   K   L +E   +  ++  +     +  +  +L  + 
Sbjct: 49  DAKYERLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKLTTELADNAELFEMS 108

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        +   + +     +++ L  E+ +  +     D  +C ++I+AG GG+EA 
Sbjct: 109 KEEGD-----ETGLLTIEGETAKLQPLIEELEFRRMFGKEADPLNCFVDIQAGAGGTEAC 163

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L R Y +YA  + +K  V   +  D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 164 DWAGMLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEYAYGLLRTETGVHRLV 223

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE  +   ++I   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 224 RKSPFDSSGGRHTSFASLFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTDSAVR 283

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH+PTGI+V     +SQH NR  A + LR++LY+ E ++   E+    + K  +G G  
Sbjct: 284 LTHMPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWG-- 341

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 342 -HQIRSYVLDNSRIKDLRTNVEISATQKVLDGDLDAFIEASLKQ 384


>gi|226941341|ref|YP_002796415.1| PrfB [Laribacter hongkongensis HLHK9]
 gi|226716268|gb|ACO75406.1| PrfB [Laribacter hongkongensis HLHK9]
          Length = 368

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K+R  E+   + +    +      +L  E  A+  ++  I        + ++L  + 
Sbjct: 31  DGKKDRLEEVSRLVEDPTIWEDPKRAQELGREKKALEDVVLVIDSILSTLADSRELFDMG 90

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D  +  +           +      + +  +  +  D  SC ++I++G GG+EA 
Sbjct: 91  RAEEDDDTVLAVR-----DDLAGVETRLEMLEFRRMFSNPMDPNSCFVDIQSGAGGTEAQ 145

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RY   + +KVEV+  S+ +  G K     + G   +  ++ E+GVHR+ 
Sbjct: 146 DWASMLERMYLRYCERKNFKVEVIEESEGEVAGIKSATLKVEGEYAYGFLRTETGVHRLV 205

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R  TS A+V V PE  +  ++DI   D+RIDT RASG+GGQH+N TDSAVR
Sbjct: 206 RNSPFDSNNRRQTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQHINKTDSAVR 265

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+NR  AM +L+ARL+++E ++   E+    + K  +G G  
Sbjct: 266 ITHLPTNIVVQCQNDRSQHKNRAEAMSMLKARLFELELRKRNEEKQALEDTKTDVGWG-- 323

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y F Q R+ D R  + +  ++ V+ G +D  I   L  
Sbjct: 324 -HQIRSYVFDQSRVKDLRTLVEVGNVKGVMDGDLDGFIEASLKQ 366


>gi|157373979|ref|YP_001472579.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3]
 gi|157316353|gb|ABV35451.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3]
          Length = 352

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 173/343 (50%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +  +      +    L +E +++  I+  I   D   ++ QDL  + 
Sbjct: 15  DAKKERLEEVCAELESAEVWSNPENAQALGKERSSLEVIVKTIDDMDSGLEDVQDLVELA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    D +       ++        + +  +     D   C L+I++G+GG+EA 
Sbjct: 75  VEEDDEETFDDASTELDGLEKRLEE-----LEFRRMFSGPHDVADCYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RM+ R+     +K E++  +D D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMFLRWGDAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG+ HTS  +V V PE  +  ++DI   D+RIDT RASG+GGQHVN T+SA+R
Sbjct: 190 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAIR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+NR  AMK L+A+LY++E   +    + + + K  IG G  
Sbjct: 250 ITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDSKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 349


>gi|254821298|ref|ZP_05226299.1| peptide chain release factor 1 [Mycobacterium intracellulare ATCC
           13950]
          Length = 357

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 148/340 (43%), Positives = 203/340 (59%), Gaps = 17/340 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + I  L    A++E R+++     + D   K    +A ++PI+         +++ + 
Sbjct: 4   PVQTIDVLLAEHADLERRLADPELHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLEA 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  D +S          E   +E  + EL+ ++  +L P+D  D    +LE+++G G
Sbjct: 64  ARELAADDDS-------FAAEASDLESRVAELDTQLTDMLAPRDPHDADDIVLEVKSGEG 116

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRM 176
           G E+ALF  DL RMY RYA    W V VL  + +D GGYK+   +I+       GV+SRM
Sbjct: 117 GEESALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           KFE GVHRVQRVP TE+ GRVHTSAA V V PE  EI +V I   D+RID  R+SG GGQ
Sbjct: 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVQIDESDLRIDVYRSSGKGGQ 236

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVRITH+PTGI+V   +E+SQ QN+ RA++VL ARL  +  ++   + SA+R 
Sbjct: 237 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARALQVLAARLQSLAEEQALADASADRA 296

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
            QI + DRSERIRTYNF + RI DHRIN   + L+ VL G
Sbjct: 297 SQIRTVDRSERIRTYNFPENRIADHRINFKSHNLDQVLDG 336


>gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1]
 gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1]
          Length = 329

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 105/331 (31%), Positives = 171/331 (51%), Gaps = 16/331 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+     D         +    +  ++ +    +++ +  +  + ++ +   +   ++L 
Sbjct: 1   MAAPDFWDDQKAAQSVISEANALKDLVGEFRSLEERFENLEVTYELVKEEPDEELQKELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  +             LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  AEAKKLSKDFSE-----FELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     ++ G K +   I G   +  +K E GVHR+ R+   +ASGR HT
Sbjct: 116 AEKKGYKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++D+  ++I++DT R+SG+GGQHVNTTDSAVRITHIPTGI+V   
Sbjct: 176 SFVSCEVVPEFDDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AM +L+A+LY  + +    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDVFIDAYLR 323


>gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
 gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
          Length = 327

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 106/332 (31%), Positives = 172/332 (51%), Gaps = 16/332 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+     D         +    +  ++ +     ++    +  + ++ +   D    +L 
Sbjct: 1   MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +   +         LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  EEAKKLTKDFSQ-----FELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     ++ G K +   I G   +  +K E GVHR+ R+   +ASGR HT
Sbjct: 116 AEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  +++I  E+++IDT R+SG+GGQHVNTTDSAVRITH+PTGI+V   
Sbjct: 176 SFVSCEVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +A+ +L+A+LY  + +    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREKAINMLKAKLYQKKMEEQQAELAELRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + DHR N+ +  ++ V+ G ID  I+  L A
Sbjct: 293 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRA 324


>gi|260577564|ref|ZP_05845503.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC
           43734]
 gi|258604288|gb|EEW17526.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC
           43734]
          Length = 358

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 137/356 (38%), Positives = 208/356 (58%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+   +  +E+++S+    +      K+ + ++ + PII      +Q +++ +    +
Sbjct: 8   IDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQAREDHEAASEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +    +E     + E+  +E+++ +L       L P+D  D    ++EI++G GG EA
Sbjct: 68  AAEDKEFAEEAKRLEEEIGELEEQLTDL-------LAPRDPHDGDDIVMEIKSGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF G+L RMY+RYA    +  E+L  ++ D GG K++  +I  +       +S  KFE 
Sbjct: 121 ALFAGELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQR+P TE+ GR+ TSAA V V PE  E  DV I  +DIR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PT I+V    E+SQ QNR RAM+VL ARL  ++ +    E +  R  QI 
Sbjct: 241 TDSAVRITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + R++DHRI      L+ VL G ++ ++  L  A +A+ + +
Sbjct: 301 TMDRSERIRTYNFPESRVSDHRIGYKANNLDSVLDGDLEALLAALKEADRARRLEA 356


>gi|50842731|ref|YP_055958.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202]
 gi|289425142|ref|ZP_06426919.1| peptide chain release factor 1 [Propionibacterium acnes SK187]
 gi|295130812|ref|YP_003581475.1| peptide chain release factor 1 [Propionibacterium acnes SK137]
 gi|50840333|gb|AAT83000.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202]
 gi|289154120|gb|EFD02808.1| peptide chain release factor 1 [Propionibacterium acnes SK187]
 gi|291375831|gb|ADD99685.1| peptide chain release factor 1 [Propionibacterium acnes SK137]
 gi|313764216|gb|EFS35580.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA1]
 gi|313772062|gb|EFS38028.1| peptide chain release factor 1 [Propionibacterium acnes HL074PA1]
 gi|313791908|gb|EFS40009.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA1]
 gi|313810262|gb|EFS47983.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA1]
 gi|313812711|gb|EFS50425.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA1]
 gi|313816309|gb|EFS54023.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA1]
 gi|313818790|gb|EFS56504.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA2]
 gi|313820562|gb|EFS58276.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA1]
 gi|313822633|gb|EFS60347.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA2]
 gi|313827397|gb|EFS65111.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA2]
 gi|313830592|gb|EFS68306.1| peptide chain release factor 1 [Propionibacterium acnes HL007PA1]
 gi|313833628|gb|EFS71342.1| peptide chain release factor 1 [Propionibacterium acnes HL056PA1]
 gi|313838323|gb|EFS76037.1| peptide chain release factor 1 [Propionibacterium acnes HL086PA1]
 gi|314915694|gb|EFS79525.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA4]
 gi|314917937|gb|EFS81768.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA1]
 gi|314920320|gb|EFS84151.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA3]
 gi|314924927|gb|EFS88758.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA3]
 gi|314931540|gb|EFS95371.1| peptide chain release factor 1 [Propionibacterium acnes HL067PA1]
 gi|314957925|gb|EFT02028.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA1]
 gi|314960548|gb|EFT04650.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA2]
 gi|314962564|gb|EFT06664.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA1]
 gi|314967573|gb|EFT11672.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA1]
 gi|314973593|gb|EFT17689.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA1]
 gi|314975815|gb|EFT19910.1| peptide chain release factor 1 [Propionibacterium acnes HL045PA1]
 gi|314983706|gb|EFT27798.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA1]
 gi|314987887|gb|EFT31978.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA2]
 gi|314989698|gb|EFT33789.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA3]
 gi|315084734|gb|EFT56710.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA2]
 gi|315085418|gb|EFT57394.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA3]
 gi|315095866|gb|EFT67842.1| peptide chain release factor 1 [Propionibacterium acnes HL038PA1]
 gi|315098771|gb|EFT70747.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA2]
 gi|315101459|gb|EFT73435.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA1]
 gi|315105832|gb|EFT77808.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA1]
 gi|315108751|gb|EFT80727.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA2]
 gi|327326418|gb|EGE68208.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA2]
 gi|327329874|gb|EGE71628.1| peptide chain release factor 1 [Propionibacterium acnes HL097PA1]
 gi|327445686|gb|EGE92340.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA2]
 gi|327448330|gb|EGE94984.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA1]
 gi|327450545|gb|EGE97199.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA3]
 gi|327453373|gb|EGF00028.1| peptide chain release factor 1 [Propionibacterium acnes HL092PA1]
 gi|328753199|gb|EGF66815.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA2]
 gi|328753962|gb|EGF67578.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA1]
 gi|328754695|gb|EGF68311.1| peptide chain release factor 1 [Propionibacterium acnes HL020PA1]
 gi|328760891|gb|EGF74456.1| peptide chain release factor 1 [Propionibacterium acnes HL099PA1]
          Length = 361

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 131/364 (35%), Positives = 203/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++ R  EIE ++++S  +       +L + +A +  ++S     DQ + 
Sbjct: 1   MSESAQQAIDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 114 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   ++R+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 353

Query: 354 SASE 357
              E
Sbjct: 354 QRPE 357


>gi|138896684|ref|YP_001127137.1| peptide chain release factor 2, RF-2 [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus
           thermodenitrificans NG80-2]
          Length = 327

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 172/332 (51%), Gaps = 16/332 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+     D         +    +  ++ +     ++    +  + ++ +   D    +L 
Sbjct: 1   MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +   +         LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  EEAKKLTKDFSQ-----FELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     ++ G K +   I G   +  +K E GVHR+ R+   +ASGR HT
Sbjct: 116 AEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  +++I  E+++IDT R+SG+GGQHVNTTDSAVRITH+PTGI+V   
Sbjct: 176 SFVSCEVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AM +L+A+LY  + +    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREKAMNMLKAKLYQKKMEEQQAELAELRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + DHR N+ +  ++ V+ G ID  I+  L A
Sbjct: 293 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRA 324


>gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
 gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
          Length = 326

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 105/333 (31%), Positives = 172/333 (51%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS+    +              +   +++ +  D+  +  Q  + ++ +   +    +L 
Sbjct: 1   MSDPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I              LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SELKELISGMND-----FELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKKGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  ++PE  +   +DI  ED+++DT RASG+GGQH+NTTDSAVRITH+PT ++V   
Sbjct: 176 SFVSCDIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ +NR +AMK+L+++LY +E ++   + +  R  Q  IG G    +IR+Y F    
Sbjct: 236 TERSQIKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +   + V+ G +D  I+  L +H
Sbjct: 293 LVKDHRTNTEVGNTQSVMDGDLDPFIDAYLRSH 325


>gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
 gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
          Length = 351

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 169/342 (49%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K R  E+   + +    +       + +E   +  +I+ +     + ++ Q +  +  +
Sbjct: 16  KKERLEEVLRELEDPSIWNDQSRAQAMAKEKGELENVINVLEGLSTQLEDAQAMLDLAVE 75

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + +S + D+      A      E   ++ +  +  +  D   C +EI+AG+GG+EA  +
Sbjct: 76  ADDESLLADVQ-----AELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDW 130

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+     +K E++  SD D  G K     + G   +  ++ ESGVHR+ R 
Sbjct: 131 ASMLLRMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRK 190

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++  R HTS + V V PE    I++DI   D+R DT RASG+GGQH+N TDSAVR+T
Sbjct: 191 SPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLT 250

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSE 304
           H+PTGI+V   +++SQH NR  A K LRA+LY++E  +         + K  IG G    
Sbjct: 251 HMPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWG---S 307

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R  +       VL G +D  I   L  
Sbjct: 308 QIRSYVLDDSRIKDLRTGVENSNTGAVLDGDLDKFIEASLKQ 349


>gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
 gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
          Length = 368

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 180/350 (51%), Gaps = 12/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEE 59
                 I  +K    EI+ +MS+        K   L ++  A+  ++ + +    K ++ 
Sbjct: 19  MGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDL 78

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  +  +   +S   ++ +      +K        +    L     D  + IL I AG
Sbjct: 79  STLIELGLEEGDESITDEVDKEYKELKKKLED-----LKIKTLLNGLYDKNNAILSIHAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           +GG+EA  +   L RMY R+A  + ++VE L     ++ G K +   I G   +  +K E
Sbjct: 134 SGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           +GVHR+ R+   +A+GR HTS A V VLPE   +I+V+I  ED++IDT RASG+GGQ+VN
Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVN 253

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T+SAVRITH+PTGI+V   SE+SQ QNR  AMK+L+A+L D+  K    +     K + 
Sbjct: 254 KTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEH 312

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                  +IR+Y F     + DHR N  +  ++ V+ G ID  IN  L  
Sbjct: 313 REAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQ 362


>gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
 gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
          Length = 348

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +           +L++E   +  ++  I        +  +L  + 
Sbjct: 11  DQKERRLEEVNQALEDPSIWSDQERAQQLSKEKKRLEDVVLTIKHLTTGLSDALELFEMA 70

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + D+ +  +        ++        + +  +     D+ +C LEI+AG GG+EA 
Sbjct: 71  KEEDDDASLEAVEADINNLKKEV-----EHLEFQRMFNQEHDEANCFLEIQAGAGGTEAQ 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY ++A  + +K E++  ++ D  G K     I+G   +  ++ E+G+HR+ 
Sbjct: 126 DWASMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETGIHRLV 185

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS A+V V+PE     ++++   D+RIDT RASG+GGQH+  TDSAVR
Sbjct: 186 RKSPFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVR 245

Query: 246 ITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+ V+ + +SQHQN+  AM +L++RLY+ E ++    +    + K  I  G  
Sbjct: 246 ITHIPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDISWG-- 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q R+ D R N+       VL G ++  I   L  
Sbjct: 304 -HQIRSYVLDQSRVKDLRTNVETGNTTAVLDGALESFIEASLKQ 346


>gi|332978282|gb|EGK15010.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)]
          Length = 325

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 105/331 (31%), Positives = 170/331 (51%), Gaps = 15/331 (4%)

Query: 23  MSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +      K+++E + +  II+ I+  +   ++   +  +  +   D  +    
Sbjct: 1   MESPELWNDPERATKISKEKSQLDAIINTITGLETTLEDAAAMLELAVEA-DDEGLLSDV 59

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q E+ A + ++ +LE    +  +     D  +C ++I++G+GG+EA  +   L RMY R+
Sbjct: 60  QQELNAAQAQVEDLE----FKRMFNGEMDPNNCFVDIQSGSGGTEAQDWAEMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +KV+V   S     G K     ++G   F  ++ E+GVHR+ R    +++   HT
Sbjct: 116 CESHGFKVDVTEVSAGSVAGVKSASFKVTGDYAFGWLRTETGVHRLVRKSPFDSNNGRHT 175

Query: 200 SAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V V PE  +         D+RIDT R+SG+GGQHVNTTDSAVRITH PT  +V   
Sbjct: 176 SFAAVFVSPEIDDDIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPTNTVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +E+SQH N+  AMK+LRA+LY++E ++   ++    + K  +G G    +IR+Y     R
Sbjct: 236 NERSQHGNKATAMKMLRAKLYELEMQKRMEKQQAVEDNKSDVGWG---SQIRSYVLDDSR 292

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           I D R  +  +    VL G +D  I   L A
Sbjct: 293 IKDLRTGVETFNTGAVLDGDLDQFIEASLKA 323


>gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
           51756]
 gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
           51756]
          Length = 349

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 175/346 (50%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +     R  E++L   +    +       L  E   +  ++  +   DQK ++  ++  
Sbjct: 10  DLPGKAARLEEVQLESEDPKLWEDPERAQALERERTQLEAVVRPLQELDQKLRDSAEMVE 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D  + +    ++ A    + +LE +           D     ++I+AG GG+E
Sbjct: 70  LAV-AEQDEALLEAVAGDLEAARATVEKLEFQRM----FSGPQDGADAFVDIQAGAGGTE 124

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY  +   R +  E++  S+ +  G K     + G   F  ++ E+GVHR
Sbjct: 125 AQDWANMLLRMYLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVHR 184

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    ++  R HTS A+V V PE     +++I   D+++DT RASG+GGQHVN TDSA
Sbjct: 185 LVRKSPFDSGNRRHTSFASVFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSA 244

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSG 300
           VR+THIPTGI+V   +++SQH+NR  AM++LR++LY++E ++   E+    + K  IG G
Sbjct: 245 VRLTHIPTGIVVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGWG 304

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y   Q RI D R  + +   + VL G +D  +   L A
Sbjct: 305 ---HQIRSYVLDQSRIKDLRTGVEVGDTQRVLDGDLDGFVEAALKA 347


>gi|89094633|ref|ZP_01167570.1| peptide chain release factor 2, programmed frameshift
           [Oceanospirillum sp. MED92]
 gi|89081103|gb|EAR60338.1| peptide chain release factor 2, programmed frameshift
           [Oceanospirillum sp. MED92]
          Length = 364

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +    D      KL +E + +  ++  I        + +DL  + 
Sbjct: 27  ETKQERLEEVSRELEDPAVWDDPENAQKLGKERSTLEAVVGTIDDLTAGVADTRDLLDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D +     + +V A+   +++LE    +  +     D  +  L+I+AG+GG+EA 
Sbjct: 87  VEE-DDEDTVAEVESDVTAMLDRLQQLE----FRRMFAGEADPNNAFLDIQAGSGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+   + +K E+L  S  D  G K    +  G   F  ++ E+GVHR+ 
Sbjct: 142 DWAEMMLRMYLRWGEDKGFKTELLECSAGDVAGIKSATISFQGEYAFGWLRTETGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++V V PE  +  D++I   D+R+D  RASG+GGQHVN T+SAVR
Sbjct: 202 RKSPFDSGGRRHTSFSSVFVSPEIDDNIDIEINPADLRVDVYRASGAGGQHVNRTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDR 302
           ITH P+GI+V + +++SQHQN+   MK LRA+LY+VE  +   A +   + K  IG G  
Sbjct: 262 ITHEPSGIVVQSQAQRSQHQNKDTCMKQLRAKLYEVEMLKRTEAAQEQEDNKADIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 320 -SQIRSYVLDDQRIKDLRTGVQSSNCDKVLDGDLDMFIEASLKA 362


>gi|319441088|ref|ZP_07990244.1| peptide chain release factor 1 [Corynebacterium variabile DSM
           44702]
          Length = 361

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 135/357 (37%), Positives = 207/357 (57%), Gaps = 17/357 (4%)

Query: 8   QICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ D+ + +  +E+++S+        A  ++ + ++ + P+I   +   Q +++ +    
Sbjct: 10  KVDDILSEYQGLEMQLSDPVLHNDAAAARRVAKRFSELQPVIQTYNRLTQAREDHEAAAE 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +    +   D        +  EI  LE ++  LL P+D  D    ++E+++G GG E
Sbjct: 70  MASEDAEFAAEAD-------RLAAEIPALEEKLTDLLAPRDPHDSDDVVMEVKSGAGGEE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFE 179
           AALF G+L RMY+RYA    +  EVL +++ D GG K++  +I  +       +S  KFE
Sbjct: 123 AALFAGELVRMYQRYAEKHGFTCEVLDTNETDLGGVKDLTMSIRSKQPTRDGAWSVFKFE 182

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVN 238
            GVHRVQR+P TE+ GR+ TSAA V V PE  E  DV I  +D+R+D  R+SG GGQ VN
Sbjct: 183 GGVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDDKDLRVDVYRSSGKGGQGVN 242

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PTGI+V    E+SQ QN+ RAM+VL ARL  ++ +      +  R  QI
Sbjct: 243 TTDSAVRITHLPTGIVVTCQKERSQIQNKARAMQVLAARLQQMKEEEADAAAAEGRHAQI 302

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            + DRSERIRTYNF + R++DHRI      L+ VL G ++ +   L  A +A  + +
Sbjct: 303 RTMDRSERIRTYNFPESRVSDHRIGYKANNLDAVLDGDLEALFGALHDADRAARLEA 359


>gi|300781422|ref|ZP_07091276.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
           33030]
 gi|300533129|gb|EFK54190.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
           33030]
          Length = 360

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 150/356 (42%), Positives = 214/356 (60%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D  + +  I+ +M +   V     + KL++ YA + PII+  +   Q +++ +    +
Sbjct: 10  VDDYVSEYQGIQAQMGDPDVVGDQDLFRKLSKRYAQLQPIINVNNELTQAREDLEAAQEM 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +    +E           +E EI  LE E+  LL P+D  D    I+EI+AG GG EA
Sbjct: 70  AAEDKEFAEEA-------TRLEGEIVRLEEELADLLAPRDEHDADDVIMEIKAGAGGEEA 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMY++YA       +VL  S++D GG K++   +  +       +S +KFE 
Sbjct: 123 ALFAGDLARMYQKYAEKAGLSWDVLDLSESDLGGVKDMTVAVKAKNPSRDGAWSMLKFEG 182

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQR+P TE+ GR+ TSAA V V PE  E++  DI  +D+R+D  R+SG GGQ VNT
Sbjct: 183 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPEEVEAVDIDEKDLRVDVYRSSGKGGQGVNT 242

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V    E+SQ QNR RAM+VL+ARL  +ER++   E +  R  Q+ 
Sbjct: 243 TDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLQARLDQLEREKAEAEAAEGRASQVR 302

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYN+ + RI+DHRIN     L+ VL G +DDII  L T  + + + +
Sbjct: 303 TMDRSERIRTYNWPENRISDHRINYKSNNLDAVLDGNMDDIITALQTHERQERLEA 358


>gi|326382082|ref|ZP_08203775.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199508|gb|EGD56689.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 364

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 143/356 (40%), Positives = 207/356 (58%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+    A ++ ++S+           ++ + +A ++P+++  +     + + +     
Sbjct: 16  IDDILAEHAGLQAQLSDPALHDDPANARRVGKRFAELAPVMTTYTKLTAARDDLEAAR-- 73

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                  +E       E+ A+E  + EL+  +  LL P+D  D    +LE+++G GG E+
Sbjct: 74  -----ELAEADAAFAEEIPALEATVTELDATLTDLLAPRDPHDSDDVVLEVKSGAGGEES 128

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF  DL RMY +Y     WK  VL ++++D GGYKE   +I  R      V+SR+KFE 
Sbjct: 129 ALFASDLVRMYLKYCERHGWKATVLGATESDLGGYKEATLSIKARETVRDGVWSRLKFEG 188

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+HTSAA V + PE  E  ++ I   D+RID  R+SG GGQ VNT
Sbjct: 189 GVHRVQRVPVTESQGRIHTSAAGVLIYPEPDEVEEIQIDESDLRIDVYRSSGKGGQGVNT 248

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PT I+V   +E+SQ QN+ RAM+VL ARL     +    E SA R+ QI 
Sbjct: 249 TDSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLKAAAEEEAEAEASAGRQAQIR 308

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + RITDHRI      L+ VL G +D +++ L+ A +   +  
Sbjct: 309 TVDRSERIRTYNFPENRITDHRIGYKANNLDSVLGGEMDALLDALVEADKQARLQQ 364


>gi|257092654|ref|YP_003166295.1| peptide chain release factor 2 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045178|gb|ACV34366.1| peptide chain release factor 2 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 347

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               ++   +   + +    D      +L  E  ++  ++  ++      ++  +L  + 
Sbjct: 10  DQKADQLKTVARELEDPAVWDNAERAQELGRERRSLENVVLTLNRVADSLRDTGELFAMA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + D          V A    I +  + + +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 70  REEDDDE-----TLNAVAADIDGIEKEVSGLEFRRMFNNPADPLNCFVDIQAGAGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RYA  + + VEVL  S+ +  G K     ISG   +  ++ E+G+HR+ 
Sbjct: 125 DWAAMLLRMYLRYAERKGYAVEVLEESEGEVAGIKTASIKISGEYAYGMLRSETGIHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ R HTS  +V+  PE     +V+I   ++RIDT RASG+GGQH+N TDSAVR
Sbjct: 185 RKSPFDSNARRHTSFCSVSAYPEIDDSFEVEINPAELRIDTYRASGAGGQHINKTDSAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+NR  AM +L++R+Y+ E ++   E+    + K  IG G  
Sbjct: 245 ITHLPTNIVVQCQNDRSQHRNRAEAMAMLKSRIYEAEMRKRQTEQQKLEDAKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 303 -HQIRSYVLDQSRIKDLRTNVEVGNTQGVLDGDLDQFIEASLKQ 345


>gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
 gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
          Length = 327

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 174/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M E    D      +     + +  K   + Q  +E  +L  +  +     D+EI++  +
Sbjct: 1   MGEPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +  +++ +   E      LL  +  D  + ++E+  G GG+E+  +   L RMY R+A
Sbjct: 61  ERIHLLQERLTTYEL----SLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 ESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTS 176

Query: 201 AATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +
Sbjct: 177 FCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQA 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    +IR+Y F     + 
Sbjct: 237 QRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N     ++ V+ G +D  I+  L   
Sbjct: 296 DHRTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
 gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
          Length = 347

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+E +  +    +      ++  E  ++  I+  +   D++ ++  +L  + 
Sbjct: 10  DAKQIRLTELERQSEDPAIWNDPDRAQEMGREKKSLENIVHTLQSVDRQLRDTHELLQIA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N    ++ +A       +         + +  +  D  D  +C ++I++G+GG+EA 
Sbjct: 70  QEENDKETLQSIADDVTELDQTL-----AGMEFRRMFSDPMDPNNCFVDIQSGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RY   R   VE+L  S  D  G K     ISG   +  ++ E+GVHR+ 
Sbjct: 125 DWASMLERMYLRYCERRGLGVELLEESPGDVAGIKSATLKISGEYAYGYLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V V PE  +  ++DI   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 185 RKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITHIPTGI+V   S +SQH+NR  AM VL++RLY+ E ++     +   + K  I  G  
Sbjct: 245 ITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 303 -HQIRSYVLDQSRIKDLRTNIEIGNTQAVLDGDLDTFIEASLKQ 345


>gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32]
 gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32]
          Length = 370

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 178/343 (51%), Gaps = 10/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  L+    E+E R++     D      +     + +   ++ +D+  ++ +D+  +I 
Sbjct: 24  DIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASWDRLNRQVEDIRVLIE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             +   +  +    EV  +  ++ +   +  +  +     D  SC   I +G GG+E+  
Sbjct: 84  LGSEAED--EATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFFSINSGAGGTESQD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY RY   + WK E+      D+ G K +  ++SG   +  +K E G+HR+ R
Sbjct: 142 WAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYAYGYLKAEVGIHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS A+V V PE   +IDV I   D+R+DT R+SG+GGQHVNTTDSA+RI
Sbjct: 202 ISPFDSNARRHTSFASVFVFPEIEDDIDVKIVETDLRVDTFRSSGAGGQHVNTTDSAIRI 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           THIPTGI+V   +E+SQH NR  AM+VLRA+LY+ E +   ++ +     K +IG G   
Sbjct: 262 THIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQAAEIAGEKKEIGWG--- 318

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y       + D R  +     + VL G ++  I   L 
Sbjct: 319 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFLM 361


>gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB]
 gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas
           aromatica RCB]
          Length = 325

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 104/331 (31%), Positives = 169/331 (51%), Gaps = 15/331 (4%)

Query: 23  MSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    D      +L  E  ++  I+  +        + ++L  +  +   +  +  + 
Sbjct: 1   MEDPKIWDDAKRAQELGREKKSLENIVLVLEEVQSGLNDGRELFDMGKEDGDEDTLLSVE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                A   E+ +    + +  +  +  D   C LEI+AG GG+EA  +   L RMY +Y
Sbjct: 61  -----ADNAELEKKVAALEFRRMFNNPSDPMPCFLEIQAGAGGTEAQDWASMLLRMYLKY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + + VEV+  S+ D  G K      +G   +  ++ E+G+HR+ R    +++ R HT
Sbjct: 116 GEKKGFTVEVMEESEGDVAGLKSATVKFTGDYAYGTLRTETGIHRLVRKSPFDSNARRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V PE  +  +++I   D+R DT RASG+GGQH+N TDSAVR+TH+PTGI+V   
Sbjct: 176 SFTSVFVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +++SQH+NR  A ++LRAR+Y+ E ++   E+    + K  IG G    +IR+Y   Q R
Sbjct: 236 NDRSQHRNRDEAWQMLRARIYEFELRKQQAEQQKLEDAKSDIGWG---HQIRSYVLDQSR 292

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           I D R N      + VL G +D  I   L  
Sbjct: 293 IKDLRTNHETGNTQAVLDGDLDPFIEASLKQ 323


>gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
           13032]
 gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
           13032]
 gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R]
 gi|24418635|sp|Q8NR57|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223553|sp|A4QDG1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC
           13032]
 gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum
           ATCC 13032]
 gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 358

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 143/358 (39%), Positives = 217/358 (60%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  +E +M++    +      ++ + Y+ + PII+        +++ +    +
Sbjct: 8   VDDILSEYHGLEQQMADPELHNDAAAARRVGKRYSELQPIINVHRDLVSAQEDLEAAREM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +      +  ++EV+ +E+++ +L       L P+D  D +  ++EI+AG GG EA
Sbjct: 68  AHEDHEFQAEAERLEVEVVELEEKLADL-------LAPRDPHDGEDIVMEIKAGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF GDL RMY+++A    + VEVL S+++D GG K+I  +I  R       +S+ KFE 
Sbjct: 121 ALFAGDLLRMYQKFADKHGFVVEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E  +V+I  +DIR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVENVEIDEKDIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QNR RAM+VL ARL  ++ +  A E +  R  QI 
Sbjct: 241 TDSAVRITHLPTGLVVTCQKERSQIQNRARAMQVLAARLQAMKEEEAAAEAATGRAAQIR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSERIRTYN+ + RI+DHRI      L+ VL G +DD+   L  A +A+ + +  
Sbjct: 301 TMDRSERIRTYNWPENRISDHRIGFKANNLDSVLDGELDDLFTALQAAERAERLEAEG 358


>gi|15644115|ref|NP_229164.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
 gi|7388056|sp|Q9X183|RF1_THEMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52695394|pdb|1RQ0|A Chain A, Crystal Structure Of Peptide Releasing Factor 1
 gi|52695395|pdb|1RQ0|B Chain B, Crystal Structure Of Peptide Releasing Factor 1
 gi|52695396|pdb|1RQ0|C Chain C, Crystal Structure Of Peptide Releasing Factor 1
 gi|4981923|gb|AAD36433.1|AE001790_5 peptide chain release factor RF-1 [Thermotoga maritima MSB8]
          Length = 342

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 147/335 (43%), Positives = 205/335 (61%), Gaps = 16/335 (4%)

Query: 22  RMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQ 80
            ++      +       EYA I  I +  +   + ++  + L                  
Sbjct: 11  LLARPDLTPEQMKNYGMEYAKIEEIENITNRIKETQEFIELLR--------------EEG 56

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
              L IEK  +EL+     LL     +     I+EIR GTGG EAALF  DLFRMY RYA
Sbjct: 57  ENELEIEKYEKELDQLYQELLFLLSPEASDKAIVEIRPGTGGEEAALFARDLFRMYTRYA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + W +EV    + D GG +E+V  + G+  +  +K+ESGVHRVQRVP TE+ GR+HTS
Sbjct: 117 ERKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTS 176

Query: 201 AATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            ATVAVLPE  E D++I  ED++I+T RASG GGQ+VN T+SAVRITH+PTGI+V   +E
Sbjct: 177 TATVAVLPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQ+QN+  A+++LRARLY +++++   E S  RK QIG+G+RSE+IRTYNF Q R+TDH
Sbjct: 237 RSQYQNKQTALRILRARLYQLQKEQKEREISQKRKSQIGTGERSEKIRTYNFPQNRVTDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RIN T Y+L+ +L G +D+II+ L+       +  
Sbjct: 297 RINYTSYRLQEILDGDLDEIISKLIEHDIENNLEE 331


>gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
 gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
          Length = 326

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +              +   +++ +  D+  +  Q  + ++ +   +    +L 
Sbjct: 1   MADPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I              LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SELKELISGMND-----FELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKKGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  ++PE  +   +DI  ED+++DT RASG+GGQH+NTTDSAVRITH+PT ++V   
Sbjct: 176 SFVSCDIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ +NR +AMK+L+++LY +E ++   + +  R  Q  IG G    +IR+Y F    
Sbjct: 236 TERSQIKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +   + V+ G +D  I+  L +H
Sbjct: 293 LVKDHRTNTEVGNTQSVMDGDLDPFIDAYLRSH 325


>gi|146308390|ref|YP_001188855.1| peptide chain release factor 2 [Pseudomonas mendocina ymp]
 gi|145576591|gb|ABP86123.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           mendocina ymp]
          Length = 378

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               +R  E+   + ++   +       L  E A ++ I+  I        + +DL  + 
Sbjct: 41  DHKHDRLVEVNRELEDASVWNKPEYAQALGRERAMLAQIVETIDDLTGSLADSRDLLEMA 100

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N +  + D+        E+    LE  + +  +     D  +C L+I+AG+GG+EA 
Sbjct: 101 AEENDEGAVNDIVAEV----ERLREILEK-LEFRRMFSGEMDPNNCYLDIQAGSGGTEAQ 155

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +   ++  S+ +  G K     I G   F  ++ E GVHR+ 
Sbjct: 156 DWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLV 215

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS + V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 216 RKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVR 275

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH N+  AMK+LRA+LY++E ++     +   + K  IG G  
Sbjct: 276 ITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWG-- 333

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  +   L  
Sbjct: 334 -HQIRSYVLDDSRIKDLRTGVERSDCQKVLDGDLDGYLEASLKQ 376


>gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226739123|sp|B7J4M2|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 365

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 180/346 (52%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            + + + R  E++  + +    +   K   L  E +A+  +I+ +        +  ++  
Sbjct: 26  DLEEKRGRLEEVQRELEDPTIWNNAEKAQELGRERSALEAVITPMDKLTASLADGGEMLE 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D+E+      ++      + +LE +           D  +C ++I+AG GG+E
Sbjct: 86  LA-LSEQDAELLAAVDADLDTALSLVEKLEFQRM----FSGAQDAANCFVDIQAGAGGTE 140

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   + RMY  +A    +  E++  S+ +  G K     + G   F  ++ E+GVHR
Sbjct: 141 AQDWAEMILRMYLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLRTETGVHR 200

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    ++  R HTS A+V V PE     +VDI   D+++DT RASG+GGQHVN TDSA
Sbjct: 201 LVRKSPFDSGNRRHTSFASVFVYPEIDDSFEVDINPADLKVDTYRASGAGGQHVNKTDSA 260

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSG 300
           +RITH+P+GI+V   +++SQH+NR  AM++LR++LY++E ++ A E+    + K  IG G
Sbjct: 261 IRITHVPSGIVVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDSKSDIGWG 320

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y   Q RI D R  + +   + VL G +D  I   L A
Sbjct: 321 ---HQIRSYVLDQSRIKDLRTGVEVGDTQKVLDGALDMFIEAALKA 363


>gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [marine bacterium HP15]
          Length = 351

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 170/340 (50%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+E  + +    D       L +E A +  I+  I       ++ + L  +  +  
Sbjct: 18  ERLIEVERELEQPSVWDDPERAQALGKERADLELIVKTIDNLTSGLEDAEGLLDIAAEEE 77

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  + ++        ++  +     + +  +     D  +  L+I+AG+GG+EA  +  
Sbjct: 78  DEGTVAEIESDLEGLDKELEK-----LEFRRMFSGEMDANNAYLDIQAGSGGTEAQDWAN 132

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R +K E++   + +  G K     I G   +  ++ E+GVHR+ R   
Sbjct: 133 MLLRMYLRWAERRGFKAEIVELMEGEVAGIKSATIHIQGDYAYGWLRTETGVHRLVRKSP 192

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++  R HTS ++V V PE     +++I   D+R+D  RASG+GGQHVN T+SAVR+TH 
Sbjct: 193 FDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHN 252

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSERI 306
           PTGI+V   + +SQHQN+ +AMK L+A+L++ E +    E+  + + K  IG G    +I
Sbjct: 253 PTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADIGWG---SQI 309

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     RI D R  +     + VL G ID  I   L  
Sbjct: 310 RSYVLDDSRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|68536431|ref|YP_251136.1| peptide chain release factor 1 [Corynebacterium jeikeium K411]
 gi|119361528|sp|Q4JUI9|RF1_CORJK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68264030|emb|CAI37518.1| peptide chain release factor RF-1 [Corynebacterium jeikeium K411]
          Length = 358

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 137/356 (38%), Positives = 209/356 (58%), Gaps = 17/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+   +  +E+++S+    +      K+ + ++ + PII      +Q +++++    +
Sbjct: 8   IDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQAREDQEAASEM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +    +E     + E+  +E+++ +L       L P+D  D    ++EI++G GG EA
Sbjct: 68  ASEDKEFAEEAKRLEEEISELEEQLTDL-------LAPRDPHDGDDIVMEIKSGAGGEEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF G+L RMY+RYA    +  E+L  ++ D GG K++  +I  +       +S  KFE 
Sbjct: 121 ALFAGELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQR+P TE+ GR+ TSAA V V PE  E  DV I  +DIR+D  R+SG GGQ VNT
Sbjct: 181 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PT I+V    E+SQ QNR RAM+VL ARL  ++ +    E +  R  QI 
Sbjct: 241 TDSAVRITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           + DRSERIRTYNF + R++DHRI      L+ VL G ++ ++  L  A +A+ + +
Sbjct: 301 TMDRSERIRTYNFPESRVSDHRIGYKANNLDSVLDGDLEALLAALKEADRARRLEA 356


>gi|302785656|ref|XP_002974599.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
 gi|300157494|gb|EFJ24119.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
          Length = 386

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 162/359 (45%), Positives = 233/359 (64%), Gaps = 11/359 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           ++ +  K++  +++R A +   + E     D  IK+ +E   +   +  I     K++E 
Sbjct: 16  ILRILEKRMISIEDRHACLSKALLEPGIASDELIKMNKELRKLDYSVDMIKALRAKEKEV 75

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA- 118
             L  ++ +   D E+R LA  E+    +E+R+ ++++   L+PKD  D + CILE    
Sbjct: 76  IGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLKLIPKDEADSRGCILEASCL 135

Query: 119 -------GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
                  G GG EA++F  DLF+MYE+YAA   W+ EVLS +  D  GYKE  A ISG  
Sbjct: 136 ICFIYLLGAGGDEASIFASDLFKMYEKYAANNSWRFEVLSITTTDTRGYKEASAVISGDD 195

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
           V+  +KFESGVHRVQRVP TE +GR+HTS A+VA+LPEA E+DV+I  ++I+IDT RA G
Sbjct: 196 VYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANEVDVEIRNDEIKIDTYRAGG 255

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQHVNTT SAVR+TH PTGI+V    E+SQH+N+ +A+ +L ARLY++ER R A  RS
Sbjct: 256 AGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSRAAASRS 315

Query: 291 ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQ 348
             R+ QIGS DRSERIRTYNF QGR+TDHR+ +T + +E +++G  ++  +N L   H+
Sbjct: 316 ELRQDQIGSSDRSERIRTYNFPQGRVTDHRVGVTQHSIEQIMEGIGLEIFVNALKMQHE 374


>gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
 gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
          Length = 331

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 113/328 (34%), Positives = 171/328 (52%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     D   K     A ++ + S +  Y + + +  D   +I     D E  D    E
Sbjct: 1   MAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELA--DEEGDDSLAGE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +    K++     E    LL     D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 59  IGETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  +  ++DI  ED++IDT RASG+GGQH+NTTDSAVRITH+PTG++V   +E+
Sbjct: 179 SCDVVPEITDDVEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ +NR RAM +LR++LY+ + +    E +  R  Q        +IR+Y F     + DH
Sbjct: 239 SQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQ-SDIAWGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R  +    +  V+ G +D  I+  L + 
Sbjct: 298 RTQVETGNVGAVMDGDLDGFIDGYLRSQ 325


>gi|292492472|ref|YP_003527911.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
 gi|291581067|gb|ADE15524.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
          Length = 365

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 177/343 (51%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+E  ++     +      +L +E A +  ++  ++   ++  + ++L  + 
Sbjct: 28  AAKQERLVEVERELAIPSVWNEPERAQRLGQERAQLQAVVGPLAALGEEIGQIKELFELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +   R+++     A  + + +   ++ +  +     D  +  L+I+AG+GG+EA 
Sbjct: 88  VEEGDEDTAREVS-----AELETMEQRLEKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+     +K E+   S  +  G K       G   F  ++ E+GVHR+ 
Sbjct: 143 DWANMLLRMYLRWGEKHGFKTELTEVSAGEVAGIKSATIRFEGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V V PE  E  D++I   D+RIDT RA+G+GGQHVN TDSAVR
Sbjct: 203 RKSPFDSGNRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRAAGAGGQHVNRTDSAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+P+ I+V   SE+SQHQN+   M  LRA+LY++E ++   E+  +   K  IG G  
Sbjct: 263 ITHLPSNIVVQCQSERSQHQNKAHGMAQLRAKLYELEMRKRQAEKQAAEEAKADIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y   Q RI D R  + +   + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDQSRIKDLRTGVEMGNTQAVLDGDLDLFIEASLK 362


>gi|85712973|ref|ZP_01044012.1| Protein chain release factor B [Idiomarina baltica OS145]
 gi|85693211|gb|EAQ31170.1| Protein chain release factor B [Idiomarina baltica OS145]
          Length = 348

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 178/341 (52%), Gaps = 15/341 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K R  E+   + +    D       L +E AA+  +I  +   +Q  ++ + L  +  +
Sbjct: 13  KKERLEEVTRELEQPEVWDDPPKAQSLGKERAALEQVIETLDNLEQGLEDIEGLVDLAVE 72

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              ++   +  Q     + +        + +  +    +D   C ++I++G+GG+EA  +
Sbjct: 73  AEDETTFDEAEQELKELLTQLEA-----LEFRRMFSRDNDSSDCYVDIQSGSGGTEAQDW 127

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A   ++K E+   S+ +  G K     I+G   +  ++ E+GVHR+ R 
Sbjct: 128 ANMLLRMYLRWAEAHEFKTEITELSEGEVAGIKSATVRIAGEYAYGWLRTETGVHRLVRK 187

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++  R HTS A+V + PE   +I+++I   D+RIDT RASG+GGQHVN TDSAVRIT
Sbjct: 188 SPFDSGNRRHTSFASVFIYPEVDDDIEIEINPSDLRIDTYRASGAGGQHVNRTDSAVRIT 247

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSE 304
           H PTGI+V   S++SQH+N+  AMK L+A+LY++E ++   ++    + K  IG G    
Sbjct: 248 HEPTGIVVQCQSDRSQHKNKDSAMKQLKAKLYELEIQKQNEDKQALEDSKADIGWG---S 304

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 305 QIRSYVLDDARIKDLRTGIENRNTQAVLDGALDPFIEASLK 345


>gi|313801610|gb|EFS42850.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA2]
          Length = 361

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 131/364 (35%), Positives = 202/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++ R  EIE ++++S  +       +L   +A +  ++S     DQ + 
Sbjct: 1   MSESAQQAIDEVRRRLREIETQLADSAVLSDPSAMGRLGRRHARLRHVVSVADRVDQLRA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 114 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   ++R+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 353

Query: 354 SASE 357
              E
Sbjct: 354 QRPE 357


>gi|294142345|ref|YP_003558323.1| peptide chain release factor 2 [Shewanella violacea DSS12]
 gi|293328814|dbj|BAJ03545.1| peptide chain release factor 2 [Shewanella violacea DSS12]
          Length = 352

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 173/343 (50%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +  S   +       L +E AA+  I+  I   D   ++ + L  + 
Sbjct: 15  DAKKERLEEVSRELENSDVWNDPDNAQALGKERAALELIVKTIDDMDTGLEDVEGLLDLA 74

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    D +         ++ +   ++ +  +     D  +  L+I++G+GG+EA 
Sbjct: 75  IEEGDEDTFNDASAE-----LDDLEKRLEDLEFRRMFSGPHDIANSYLDIQSGSGGTEAQ 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +K E++  +  D  G K      +G   F  ++ E+GVHR+ 
Sbjct: 130 DWANMVLRMYLRWGEAHDYKPELIEVTAGDVAGIKGATIKFNGEYAFGSLRTETGVHRLV 189

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG+ HTS  +V V PE  +  ++DI   D+RIDT RASG+GGQH+N T+SA+R
Sbjct: 190 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHINKTESAIR 249

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH+NR  AMK L+A+L+++E  +   E+  + + K  IG G  
Sbjct: 250 ITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLFELEMLKQNQEKQAAEDAKSDIGWG-- 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 308 -SQIRSYVLDDARIKDLRTGVESRNTQTVLDGGLDMFIQASLK 349


>gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 protein [Xanthomonas albilineans GPE
           PC73]
 gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas
           albilineans]
          Length = 373

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 170/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   +      +   +   L  E A +   +  I+   +   E  +L   +
Sbjct: 27  DAKKERLEEVARELESPDVWNDPERAQGLGRERANLEKTVGGIASVLEGLNESLELLE-L 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +  +D +       +V   + ++ +LE +           D  +  ++I+AG GG+EA 
Sbjct: 86  AESENDEDTAQGVIADVDRFQTQVEKLEFQRM----FSGQMDSCNAFVDIQAGAGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   R WK E++  S  +  G K     + G   +  +K E+GVHR+ 
Sbjct: 142 DWAEILLRMYLRWCESRGWKTELMEVSGGEVAGIKSATLRVEGDFAYGWLKTETGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS  +V V PE  +  D+DI   D++ D  R+SG+GGQHVN T+SAVR
Sbjct: 202 RKSPFDSDNRRHTSFTSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PTGI+V   + +SQHQNR  AMK+L A+LY++E ++   ER A    K  IG G  
Sbjct: 262 ITHVPTGIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAERDAVEATKSDIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR Y   Q RI D R  +     + VL G +D+ +   L 
Sbjct: 320 -SQIRNYVLDQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLK 361


>gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
 gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
          Length = 351

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 102/340 (30%), Positives = 165/340 (48%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+E  +      +       L +E + +  I+S I        + + L  +  + +
Sbjct: 18  ERLTEVERELEMPSVWEDPERAQSLGKERSDLELIVSTIDRLTSGLTDAEGLLEMAVEED 77

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            ++ + D+            +     + +  +     D  +  L+I+AG+GG+EA  +  
Sbjct: 78  DEATVADIGNDLAEMDANLEK-----LEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWGN 132

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R +K E++   + +  G K     I G   F  ++ E+GVHR+ R   
Sbjct: 133 MLLRMYLRWAERRGFKAEIVELQEGEVAGIKSATLHIQGDYAFGWLRTETGVHRLVRKSP 192

Query: 191 TEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++  R HTS ++V V         ++I   D+R+D  RASG+GGQHVN T+SAVR+TH 
Sbjct: 193 FDSGNRRHTSFSSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHN 252

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI+V   + +SQHQN+ +AMK L+A+L++ E +    E+    + K  IG G    +I
Sbjct: 253 PTGIVVACQAGRSQHQNKDQAMKQLKAKLFEHEMQARNAEKQKLEDSKSDIGWG---SQI 309

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     RI D R  +     + VL G ID  I   L  
Sbjct: 310 RSYVLDDSRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|93279782|pdb|2FVO|A Chain A, Docking Of The Modified Rf1 X-Ray Structure Into The Low
           Resolution Cryo-Em Map Of E.Coli 70s Ribosome Bound With
           Rf1
          Length = 333

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 147/335 (43%), Positives = 205/335 (61%), Gaps = 16/335 (4%)

Query: 22  RMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQ 80
            ++      +       EYA I  I +  +   + ++  + L                  
Sbjct: 11  LLARPDLTPEQMKNYGMEYAKIEEIENITNRIKETQEFIELLR--------------EEG 56

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
              L IEK  +EL+     LL     +     I+EIR GTGG EAALF  DLFRMY RYA
Sbjct: 57  ENELEIEKYEKELDQLYQELLFLLSPEASDKAIVEIRPGTGGEEAALFARDLFRMYTRYA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + W +EV    + D GG +E+V  + G+  +  +K+ESGVHRVQRVP TE+ GR+HTS
Sbjct: 117 ERKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTS 176

Query: 201 AATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            ATVAVLPE  E D++I  ED++I+T RASG GGQ+VN T+SAVRITH+PTGI+V   +E
Sbjct: 177 TATVAVLPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQ+QN+  A+++LRARLY +++++   E S  RK QIG+G+RSE+IRTYNF Q R+TDH
Sbjct: 237 RSQYQNKQTALRILRARLYQLQKEQKEREISQKRKSQIGTGERSEKIRTYNFPQNRVTDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RIN T Y+L+ +L G +D+II+ L+       +  
Sbjct: 297 RINYTSYRLQEILDGDLDEIISKLIEHDIENNLEE 331


>gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. Ames]
          Length = 365

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 16/347 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           +   + + AE+E +M  +   D              +  ++ K    D+  +  +  H +
Sbjct: 26  LPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHEL 85

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +    +L       I++            LL  D  D    ILE+  G GG+E+
Sbjct: 86  LKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNKAILELHPGAGGTES 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR+
Sbjct: 141 QDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 201 VRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G 
Sbjct: 261 RITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG- 319

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 320 --SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364


>gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
 gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
 gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 372

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 182/346 (52%), Gaps = 14/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + + + R  E+E  M      D   +  +    +S +   + IY + + +++++  +I 
Sbjct: 26  DLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIYHKLQNQKEEIELMIE 85

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                +D  I    Q  +    ++   +        L     D  + I+ + AG GG+E+
Sbjct: 86  MGYEENDPSIVPDIQEMLDEFIQDFEHI----RIKTLLSGEYDKDNAIVTLHAGAGGTES 141

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L+RMY R+A  + +  EVL   D D+ G K +   ++G   +  +K E GVHR+
Sbjct: 142 CDWASMLYRMYLRWADRQGFSTEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRL 201

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS  +  V+P+  E  DV+I  +D+RIDT R+SG+GGQH+N T SA+
Sbjct: 202 VRISPFNAAGKRQTSFVSCDVMPDIEEDVDVEINPDDLRIDTYRSSGAGGQHINKTSSAI 261

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGD 301
           RITH+PTGI+V   +E+SQ QN+ +AM++L+A+LY ++++    + S  +    +IG G+
Sbjct: 262 RITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQGELTEIGWGN 321

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y       + DHR N     ++ V+ G ID+ IN  L  
Sbjct: 322 ---QIRSYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYLKW 364


>gi|319779400|ref|YP_004130313.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
 gi|317109424|gb|ADU92170.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
          Length = 327

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 110/332 (33%), Positives = 178/332 (53%), Gaps = 15/332 (4%)

Query: 22  RMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    +   K   L++E  ++  ++  +S  +Q  ++ +DL+T+  + N DS +  +
Sbjct: 2   ELEDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDSTLIAI 61

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            +     +EK        + +  +     D  +C ++I+ G GG+EA  +   L R Y R
Sbjct: 62  EEDSKKYLEKI-----EGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLR 116

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + +K EVL  S  D  G K     + G   F  ++ ESGVHR+ R    +++   H
Sbjct: 117 YCERKGFKTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSANGRH 176

Query: 199 TSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A++ V PE  +  +VDI   D+RIDT RASG+GGQH+N TDSAVRITH PTGI+V  
Sbjct: 177 TSFASLYVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC 236

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            +++SQH+N+  AM +L+++LY++E ++   E+      K  +G G    +IR+Y   Q 
Sbjct: 237 QNDRSQHRNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWG---HQIRSYVLDQS 293

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           RI D R N+ +   + VL G +D  I   L  
Sbjct: 294 RIKDLRTNVEVSNTQKVLDGDLDMFIEASLKQ 325


>gi|289428601|ref|ZP_06430285.1| peptide chain release factor 1 [Propionibacterium acnes J165]
 gi|289158295|gb|EFD06514.1| peptide chain release factor 1 [Propionibacterium acnes J165]
 gi|313807753|gb|EFS46240.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA2]
 gi|313825434|gb|EFS63148.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA1]
 gi|314978719|gb|EFT22813.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA2]
 gi|315088524|gb|EFT60500.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA1]
 gi|327331707|gb|EGE73444.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA3]
 gi|327443483|gb|EGE90137.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA2]
 gi|332675656|gb|AEE72472.1| peptide chain release factor 1 [Propionibacterium acnes 266]
          Length = 361

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 202/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++ R  EIE ++++S  +       +L + +A +  ++S     DQ + 
Sbjct: 1   MSESAQQAIDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DVEAAEDLT--EEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 114 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   ++R+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+ TGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLRTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 353

Query: 354 SASE 357
              E
Sbjct: 354 QRPE 357


>gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1]
 gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1]
          Length = 365

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 183/340 (53%), Gaps = 6/340 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  +K    ++E +   +   +      +    ++ +  K   +   +++  DL T+I  
Sbjct: 25  IDKIKFEINQLEQKTFAADFWNDQELAQKTLQRLNDLKEKFDNFTLLEKKYDDLLTLIEL 84

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             ++++  +L    +  ++   ++LE      LL    D  ++ IL + AG GG+EA  +
Sbjct: 85  C-TETDDEELRTELLNEMKDFKKQLEKMKLQTLLSGKYDG-RNAILTLHAGAGGTEAQDW 142

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           V  L RMY R+A  + +KV +L     D+ G K     + G   +  +K E GVHR+ R+
Sbjct: 143 VSMLLRMYTRWAEDKGYKVSILDMLPGDEAGIKSAAVLVEGPNAYGYLKSEKGVHRLVRI 202

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+GR HTS A+V V+P    +I++DI  ED++IDT R+ G+GGQHVN T+SAVRIT
Sbjct: 203 SPFDAAGRRHTSFASVDVMPEIDDDIEIDIKPEDLKIDTFRSGGAGGQHVNKTESAVRIT 262

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG +V   +E+SQ  NR  AMK+LRA+L+D+ ++    E    R  Q        +I
Sbjct: 263 HIPTGTVVSCQNERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQ-KEIAWGSQI 321

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y F     + DHR ++ +  ++ V+ G +D+ IN  L 
Sbjct: 322 RSYIFHPYSLVKDHRTDVEVGNVQAVMDGELDEFINAYLK 361


>gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
 gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
 gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1]
 gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2]
 gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
 gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8]
 gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
 gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
 gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
 gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6]
 gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
 gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
 gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
 gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
 gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
 gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
 gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
 gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1]
 gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2]
 gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
 gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8]
 gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
 gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
 gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
 gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6]
 gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
 gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
 gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
 gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
 gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
 gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
 gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
 gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
 gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
 gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
 gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
 gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
 gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
 gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
 gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
 gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
 gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62]
 gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
          Length = 327

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 174/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M E    D      +     + +  K   + Q  +E  +L  +  +     D+EI++  +
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +  +++ +   E      LL  +  D  + ++E+  G GG+E+  +   L RMY R+A
Sbjct: 61  ERIHLLQERLTTYEL----SLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 ESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTS 176

Query: 201 AATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +
Sbjct: 177 FCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQA 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    +IR+Y F     + 
Sbjct: 237 QRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N     ++ V+ G +D  I+  L   
Sbjct: 296 DHRTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
 gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
          Length = 368

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 177/349 (50%), Gaps = 10/349 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                ++   + + AE+E +M E    D   K  +    ++ +   +  Y     + +D 
Sbjct: 19  MGESLEVPAKEEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKNLVAKFEDA 78

Query: 63  HTV--IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            T+  +G    D  + +  + E+ A+ + +  L       +L     D  + IL + AG 
Sbjct: 79  QTLWEMGMEEQDESMEEDVKSELAAVAEGLESL----QLEVLLSGPYDANNAILTLHAGA 134

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+EA  +   L RMY R+A    + VE       D+ G K     I G   +  ++ E 
Sbjct: 135 GGTEAQDWTQMLLRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFLRSEK 194

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           G+HR+ R+   +A  R HTS A   ++PE  +  +V+I + D+R+DT RASG+GGQH+N 
Sbjct: 195 GIHRLVRISPFDAQARRHTSFAACDIMPEIDDNVEVNINMSDVRVDTYRASGAGGQHINK 254

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH+PTGI+V   +E+SQ QNR + +K+LRA+L+++E ++   E +     Q  
Sbjct: 255 TSSAVRMTHMPTGIVVQCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKLEGDQQK 314

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +   +IR+Y F     + DHR N+    ++ V+ G ID  I   L A
Sbjct: 315 -IEWGSQIRSYVFQPYTMVKDHRTNVETGNVQAVMDGDIDMFIRAFLAA 362


>gi|314955551|gb|EFS99954.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA1]
          Length = 361

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 203/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++ R  +IE ++++S  +       +L + +A +  ++S     DQ + 
Sbjct: 1   MSESAQQAIDEVRRRLRDIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 114 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   ++R+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 353

Query: 354 SASE 357
              E
Sbjct: 354 QRPE 357


>gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3]
 gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
 gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
 gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
 gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
 gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3]
 gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
 gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
 gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
 gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
 gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
 gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
          Length = 327

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 102/328 (31%), Positives = 167/328 (50%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    D      +     + +  K   + Q  +E  +L  +      + +     ++E
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 + R         LL  +  D  + ++E+  G GG+E+  +   L RMY R+A  
Sbjct: 61  ERIHLLQERL--TTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAES 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 119 HGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFC 178

Query: 203 TVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +++
Sbjct: 179 SVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    +IR+Y F     + DH
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N     ++ V+ G +D  I+  L   
Sbjct: 298 RTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|307104974|gb|EFN53225.1| hypothetical protein CHLNCDRAFT_25946 [Chlorella variabilis]
          Length = 360

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 225/354 (63%), Gaps = 8/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ + +  F E++ RM++         Y KL    + I   +   + Y   +++  D   
Sbjct: 9   KLEETEKSFKELQERMADPEVSGNNTGYQKLVRAVSDIQDAVDGYTAYKDLERQLADAKE 68

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D E+ +LA+ E+ A++  I +    + YLLLPKD  D+K+ +LE+RAGTGG E
Sbjct: 69  LLKESEGDPEMAELAREEMEALQAAIEQQGERLKYLLLPKDPLDEKNIMLEVRAGTGGEE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AAL+  DL RMY++YA  + WKV ++S S  + GGYKE V  I+G     ++K+ESGVHR
Sbjct: 129 AALWAADLIRMYQKYADTQGWKVSLMSESSAEAGGYKECVLQITGD---RQLKYESGVHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE SGRVHTS ATVA++PE  ++ V I  +DI + T RA G+GGQ+VN  ++AV
Sbjct: 186 VQRVPATETSGRVHTSTATVAIMPEVDDVAVKIDPKDIALTTARAGGAGGQNVNKVETAV 245

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H PTGI +    E++Q +NR RAM +LRA+L+++E ++  +E SA RK Q+G+G RS
Sbjct: 246 DLMHKPTGIRIFCQEERTQGRNRERAMALLRAKLFELELEKQRSEISARRKSQVGTGSRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+I+TYN+   R++DHR  +  Y L  V++G +D+ I  ++   Q +M+    E
Sbjct: 306 EKIKTYNYKDTRMSDHRSKIN-YDLNKVMEGALDECIQTMVMLDQQEMLRDLLE 358


>gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
 gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
 gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
 gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712]
 gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613]
 gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
 gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
 gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
 gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
 gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
 gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712]
 gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613]
 gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
 gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
 gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
 gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
          Length = 327

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 174/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M E    D      +     + +  K   + Q  +E  +L  +  +     D+EI++  +
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELE 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +  +++ +   E      LL  +  D  + ++E+  G GG+E+  +   L RMY R+A
Sbjct: 61  ERIHLLQERLTTYEL----SLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 ESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTS 176

Query: 201 AATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +
Sbjct: 177 FCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQA 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    +IR+Y F     + 
Sbjct: 237 QRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N     ++ V+ G +D  I+  L   
Sbjct: 296 DHRTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|308198348|ref|YP_003933612.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
 gi|307752087|gb|ADN93061.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
          Length = 364

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               +R  E+   + +    +       L  E A ++ ++  +        + +DL  + 
Sbjct: 27  DQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +  + D+A       E   +     + +  +     D  +  L+I+AG+GG+EA 
Sbjct: 87  VEEDDEGAVDDVANEVERLREILEK-----LEFRRMFSGEMDPNNAYLDIQAGSGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    +   ++  S+ +  G K     I G   F  ++ E GVHR+ 
Sbjct: 142 DWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS   V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 202 RKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH N+  AMK+LRA+LY++E ++   A++   + K  IG G  
Sbjct: 262 ITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R  +     + VL G +D+ +   L  
Sbjct: 320 -HQIRSYVLDQSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 362


>gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. 'Ames Ancestor']
          Length = 365

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 174/348 (50%), Gaps = 16/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHT 64
            +   + + AE+E +M  +   D              +  ++ K    D+  +  +  H 
Sbjct: 25  DLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    +L       I++            LL  D  D    ILE+  G GG+E
Sbjct: 85  LLKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNKAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR
Sbjct: 140 SQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++SGR HTS  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSA
Sbjct: 200 LVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VRITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G
Sbjct: 260 VRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG 319

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 320 ---SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364


>gi|306818471|ref|ZP_07452194.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239]
 gi|304648644|gb|EFM45946.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239]
          Length = 366

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 140/361 (38%), Positives = 201/361 (55%), Gaps = 19/361 (5%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L   +A +E  MS+           ++   YA +  + +    + + + + +    +
Sbjct: 11  VEPLLEEYAAVEREMSDPDLHSDQSRARRVGRRYAELGRVAAAARAFLEAQDDLEAGREM 70

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +   D +          A       L       L P+D DD +  I+EI+AG GG E+
Sbjct: 71  AAE---DPDFAAELPKLQEAFYTVQAALIEI----LTPRDPDDARDVIMEIKAGEGGEES 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF GDL RMY+ YA    W V++L  +++D GG K+               GV++ +K+
Sbjct: 124 ALFAGDLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLKY 183

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHV 237
           E GVHRVQRVP TE+ GR+HTSAA V V+PEA E  D++I   D+RID  R+SG GGQ V
Sbjct: 184 EGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSV 243

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITHIPTGI+V+  +EKSQ QN+   M+VLR+RL  +E+++   E +  R  Q
Sbjct: 244 NTTDSAVRITHIPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARASQ 303

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I   + A +A  + +  
Sbjct: 304 VRTVDRSERIRTYNFPENRIADHRTGYKAYNLDAVLNGELAPVIQSAIDADEAARLAAVG 363

Query: 357 E 357
           E
Sbjct: 364 E 364


>gi|298346212|ref|YP_003718899.1| peptide subunit release factor RF1 [Mobiluncus curtisii ATCC 43063]
 gi|304390026|ref|ZP_07371980.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|298236273|gb|ADI67405.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 43063]
 gi|304326508|gb|EFL93752.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 367

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 143/360 (39%), Positives = 207/360 (57%), Gaps = 19/360 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L   + ++E++MS+           K+   YA +S + + +  + Q + + +    +
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQSWLQARDDLEAGREM 70

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            G+   D +          A E+   +L       L P+D DD +  I+EI+AG GG E+
Sbjct: 71  AGE---DPDFAAEIPGLEAAFEQANADLIE----ALTPRDPDDARDVIMEIKAGEGGEES 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF GDL RMY+ YA    W V+VL  +++D GG K+               GV++ +K+
Sbjct: 124 ALFAGDLMRMYQHYAEKMGWAVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKY 183

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHV 237
           E GVHRVQRVP TE+ GR+HTSAA V V+PEA E  D++I   D+RID  R+SG GGQ V
Sbjct: 184 EGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSV 243

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+V+  +EKSQ QN+   M+VLR+RL  +E ++   E +  R  Q
Sbjct: 244 NTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQ 303

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I   + A +A  + +  
Sbjct: 304 VRTVDRSERIRTYNFPENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDADEAARLAAVG 363


>gi|315657282|ref|ZP_07910164.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491754|gb|EFU81363.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 367

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 143/360 (39%), Positives = 207/360 (57%), Gaps = 19/360 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L   + ++E++MS+           K+   YA +S + + +  + Q + + +    +
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQSWLQARDDLEAGREM 70

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            G+   D +          A E+   +L       L P+D DD +  I+EI+AG GG E+
Sbjct: 71  AGE---DPDFAAEIPGLEAAFEQSNADLIE----ALTPRDPDDARDVIMEIKAGEGGEES 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF GDL RMY+ YA    W V+VL  +++D GG K+               GV++ +K+
Sbjct: 124 ALFAGDLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKY 183

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHV 237
           E GVHRVQRVP TE+ GR+HTSAA V V+PEA E  D++I   D+RID  R+SG GGQ V
Sbjct: 184 EGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSV 243

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+V+  +EKSQ QN+   M+VLR+RL  +E ++   E +  R  Q
Sbjct: 244 NTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQ 303

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I   + A +A  + +  
Sbjct: 304 VRTVDRSERIRTYNFPENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDADEAARLAAVG 363


>gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548]
 gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus
           prevotii DSM 20548]
          Length = 367

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 168/341 (49%), Gaps = 8/341 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+    E+E + +     +   K  +  A ++    ++S Y + +    D   ++   
Sbjct: 28  ASLEKEIKELEKQSASPDFWNDSDKAQKIMADLASKKDELSDYKKLENGLVDNTDMLDLV 87

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
               E       EV    K + +L  ++          D  +  + I AG GG EA  + 
Sbjct: 88  EMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQLDGEYDKNNAYISINAGAGGLEATDWA 147

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             LFRMY+RY     +K E+   ++ + GG K     ++G   +  +K E GVHR+ R+ 
Sbjct: 148 DMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKSATMHVTGPYAYGYLKAEKGVHRLVRIS 207

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++  R HTS A+V V PE    I++DI   D+RIDT RASG+GGQHVN TDSAVRITH
Sbjct: 208 PFDSQSRRHTSFASVDVFPELDENIELDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITH 267

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSER 305
           IPTG++  + +E+SQ QNR  AM +L+++L  ++ +    +    +    QI  G    +
Sbjct: 268 IPTGVVATSQAERSQIQNRQTAMNLLKSKLVQIKEEEQREKIEDIQGSYSQIAWG---SQ 324

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR+Y F     + DHR    +  +E V+ G I   I+  L 
Sbjct: 325 IRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGFIDAFLA 365


>gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2]
 gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter
           eiseniae EF01-2]
          Length = 381

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   ++  + +    +   K   L +E  ++  ++S +    ++  +  +L  + 
Sbjct: 44  DAKFERLRTVDAALQDPAVWNDPKKAQALGKEKKSLDDVVSMLDKLGRELADNTELFEMS 103

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D+ +  L           I +LE    +       +    C ++I+AG GG+EA 
Sbjct: 104 KQEGDDAGLLALQAEAARL-RPGIEQLEFRRMFSKEADALN----CFVDIQAGAGGTEAC 158

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L R Y RYA  + +K  V   +  D  G K     + G   +  ++ E+GVHR+ 
Sbjct: 159 DWAGMLLRQYLRYAERKGFKATVEEETPGDVAGLKSATIKVEGEYAYGLLRTETGVHRLV 218

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE  +   +DI   D+R DT R+SG+GGQH+N TDSAVR
Sbjct: 219 RKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTDSAVR 278

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH+PTGI+V     +SQH NR  A + LR+RLYD ER+    E+    + K  +G G  
Sbjct: 279 LTHLPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHERRLRQQEQQKLEDSKTDVGWG-- 336

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R ++ +   + VL G +D  I   L  
Sbjct: 337 -HQIRSYVLDNSRIKDLRTHVEISATQKVLDGDLDAFIEAALKQ 379


>gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 333

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 102/338 (30%), Positives = 168/338 (49%), Gaps = 12/338 (3%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    D       + +E  ++  ++ +      K ++ + L  +  +      I +  
Sbjct: 1   MEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEEDEDADLIEEAT 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
            +     +         +    L     D    IL + AG GG+E+  + G L+RM+ R+
Sbjct: 61  ALMDEFEKTYEE-----LRISTLLTGEYDKDDAILTLHAGAGGTESCDWAGMLYRMFTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +  EVL   D D+ G K +   I+G   +  ++ E GVHR+ R+    A+G+  T
Sbjct: 116 AGKKGYGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRLVRISPFNAAGKRQT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+  V+P+  +  +V+I  EDIRIDT RASG+GGQH+N TDSA+RITH+PTGI+V   
Sbjct: 176 SFASCDVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH+N+ +AMK+L+ +LY +++++   + S  R   +G      +IR+Y       +
Sbjct: 236 NERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDIR-GDVGDNGWGNQIRSYVLQPYTMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            DHR N        VL G +D  +N  L          
Sbjct: 295 KDHRTNFESGNPSAVLDGDLDGFMNAYLAWDNNSKKEE 332


>gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188]
 gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
 gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188]
 gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
 gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
 gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
          Length = 327

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 174/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M E    D      +     + +  K   + Q  +E  +L  +  +     D+EI++  +
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +  +++ +   E      LL  +  D  + ++E+  G GG+E+  +   L RMY R+A
Sbjct: 61  ERIHLLQERLTTYEL----SLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 ESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTS 176

Query: 201 AATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +
Sbjct: 177 FCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQA 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    +IR+Y F     + 
Sbjct: 237 QRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N     ++ V+ G +D  I+  L   
Sbjct: 296 DHRTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|293449213|ref|ZP_06663634.1| peptide chain release factor 2 [Escherichia coli B088]
 gi|332280425|ref|ZP_08392838.1| peptide chain release factor RF-2 [Shigella sp. D9]
 gi|291322303|gb|EFE61732.1| peptide chain release factor 2 [Escherichia coli B088]
 gi|332102777|gb|EGJ06123.1| peptide chain release factor RF-2 [Shigella sp. D9]
          Length = 332

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 106/337 (31%), Positives = 177/337 (52%), Gaps = 15/337 (4%)

Query: 17  AEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   + +    +       L +E +++  ++  +    Q  ++   L  +  + + + 
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEE 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
              +       A    + E   ++ +  +     D   C L+I+AG+GG+EA  +   L 
Sbjct: 62  TFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLE 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
            GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVRITHIPTG
Sbjct: 177 GGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTG 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTY 309
           I+    +++SQH+N+ +AMK ++A+LY++E ++   E+    + K  IG G    +IR+Y
Sbjct: 237 IVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                RI D R  +     + VL G +D  I   L A
Sbjct: 294 VLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 330


>gi|331007552|ref|ZP_08330709.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
           IMCC1989]
 gi|330418642|gb|EGG93151.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
           IMCC1989]
          Length = 347

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + + AE+EL ++E    +       L +E A++  I+  I   D    + ++L  + 
Sbjct: 10  DAKQEQLAEVELELAEPEVWNDPARAQALGQERASLEAIVGTIQTLDTGVVDARELLDMA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +S + D+     +   +  +     + +  +     D  +  L+I++G+GG+EA 
Sbjct: 70  VEEGDESILIDVQDEIDVLSAQLGK-----LEFRRMFSGETDANNAYLDIQSGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+   R +K  +  +S  D  G K       G   F  ++ E+GVHR+ 
Sbjct: 125 DWAEMVLRMYLRWGEARGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++S R HTS  +V V PE     +VD+   ++R DT RASG+GGQHVN TDSAVR
Sbjct: 185 RKSPFDSSSRRHTSFCSVFVSPEIDDNFEVDVDKSEVREDTYRASGAGGQHVNKTDSAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           +TH  +GI+V   S++SQHQNR  A K+LRARLY+ E +R     +   + K  IG G  
Sbjct: 245 LTHEASGIVVQCQSQRSQHQNRDTAWKMLRARLYEQELQRRNADKQAQEDNKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+     + VL G +D  I   L A
Sbjct: 303 -SQIRSYVLDDQRIKDLRTNVQTSNCQAVLDGSLDQFIEASLKA 345


>gi|254468217|ref|ZP_05081623.1| peptide chain release factor 2 [beta proteobacterium KB13]
 gi|207087027|gb|EDZ64310.1| peptide chain release factor 2 [beta proteobacterium KB13]
          Length = 351

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 178/346 (51%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            + + K +  E+  +  +    +      K+ +E   +   I +    +   +  ++L  
Sbjct: 12  DLDNKKEQLKELTRQQEDPKIWEDHSLSQKIGKEKRILEDTIQEFEQLNSGIENNKELFD 71

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + + DS + D     +      + +   ++ +  +  +  D  +C ++ ++G+GG+E
Sbjct: 72  LAFEESDDSTLND-----LFQDTINLDKKLGQLEFKRMFSNPLDPNNCFIDFQSGSGGTE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY RY   + +KVEV+  ++ +  G K     I G   +   + E+G+HR
Sbjct: 127 AQDWANMLLRMYLRYCEEKGFKVEVMEITEGEVAGIKGATIKIIGDYAYGYFRTETGIHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    ++  R HTS A V V PE  E  ++DI   D+RIDT RASG+GGQH+N TDSA
Sbjct: 187 LVRKSPFDSGSRRHTSFAGVNVYPEIDESVEIDINPADLRIDTYRASGAGGQHINKTDSA 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           VRITH P+G++V   +++SQH+N+ +AM +L+A+LY +E  +   E+ A    K  IG G
Sbjct: 247 VRITHEPSGVVVQCQNDRSQHRNKAQAMDMLKAQLYRIELDKRNEEKQAMEDAKSDIGWG 306

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y   Q RI D R  + +   + VL G +D  I   L  
Sbjct: 307 ---HQIRSYVLDQSRIKDLRTGVEVGNTQGVLDGNLDPFITESLKQ 349


>gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
 gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
          Length = 327

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 173/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M E    D      +     + +  K   + Q  +E  +L  +  +     D+EI++  +
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +  +++ +   E      LL  +  D  + ++E+  G GG+E+  +   L RMY R+A
Sbjct: 61  ERIHLLQERLTTYEL----SLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 ESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTS 176

Query: 201 AATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V +  
Sbjct: 177 FCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQV 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    +IR+Y F     + 
Sbjct: 237 QRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N     ++ V+ G +D  I+  L   
Sbjct: 296 DHRTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|327454116|gb|EGF00771.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA2]
          Length = 361

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 131/364 (35%), Positives = 203/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++ R  EIE ++++S  +       +L + +A +  ++S     DQ + 
Sbjct: 1   MSESAQQAIDEVRRRLREIETQLADSAVLSDSSAMGRLGKRHARLRHVVSVADRVDQLRA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DVEAAEDLT--EEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 114 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   ++R+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 353

Query: 354 SASE 357
              E
Sbjct: 354 QRPE 357


>gi|217976907|ref|YP_002361054.1| hypothetical protein Msil_0721 [Methylocella silvestris BL2]
 gi|217502283|gb|ACK49692.1| conserved hypothetical protein [Methylocella silvestris BL2]
          Length = 376

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 170/347 (48%), Gaps = 10/347 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           H  +   + R AE+  ++ +    D      +     + +  ++    +   E  D  T+
Sbjct: 22  HLDVATAERRLAELNAKVEDPNLWDDADAAQKIMRERTDLEDRLGSLARFDSELDDAVTL 81

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +    ++ +     +        ++           L     D     +E+ +G GG+E+
Sbjct: 82  VELAEAEEDTATEKEAIGQLKSLKLEA--ERRQIEALLSGEVDGNDTYIEVHSGAGGTES 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   LFRMY R+A   K+KVEV+  +  D+ G K     + G       K ESGVHR+
Sbjct: 140 CDWARMLFRMYARWAERHKFKVEVIEETAGDEAGLKSGTLLVKGHNAHGWAKTESGVHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ R HTS A+V V P    +ID+D+   D RIDT R+SG+GGQHVNTTDSAV
Sbjct: 200 VRISPFDSNARRHTSFASVWVYPVIDDKIDIDVKESDCRIDTYRSSGAGGQHVNTTDSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHIP+GI+V    E+SQH+NR  A  +LRARLY+ E ++     +A    K +IG G 
Sbjct: 260 RITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEQEIEKREAAANATEASKTEIGWG- 318

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y     + + D R  +T    + VL G +D  +   L   
Sbjct: 319 --HQIRSYVLQPYQLVKDLRSGVTSGTPDDVLDGDLDSFMEAALAQR 363


>gi|310644311|ref|YP_003949070.1| protein chain release factor b-like protein [Paenibacillus polymyxa
           SC2]
 gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa
           SC2]
          Length = 339

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 114/335 (34%), Positives = 176/335 (52%), Gaps = 6/335 (1%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
            A  E +M+     D   K     A ++ + S +  Y+Q +QE +D   ++     + + 
Sbjct: 2   IANFEEKMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEEEGD- 60

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            +    EV    K +     E    LL     D  + ILE+  G GG+E+  +   L RM
Sbjct: 61  -EALVGEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRM 119

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y R+   R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SG
Sbjct: 120 YTRWGEKRGFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSG 179

Query: 196 RVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           R HTS  +  V+PE   ++D++I  ED++IDT RASG+GGQH+NTTDSAVRITH+PTGI+
Sbjct: 180 RRHTSFVSCDVVPEIADDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIV 239

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V   +E+SQ +NR RAM +LR++LY+ + +    +    R  Q        +IR+Y F  
Sbjct: 240 VTCQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQ-SDIAWGSQIRSYVFHP 298

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              + DHR ++    +  V+ G +D  I+  L + 
Sbjct: 299 YSMVKDHRTSVETGNVGAVMDGDLDPFIDGYLRSQ 333


>gi|300933612|ref|ZP_07148868.1| peptide chain release factor 1 [Corynebacterium resistens DSM
           45100]
          Length = 353

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 140/358 (39%), Positives = 208/358 (58%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+   +  +E ++ +    +      K+ + ++ + PII      +Q +++ +    +
Sbjct: 2   VDDILAEYQGLEAQLGDPELHNDPAAARKVGKRFSELQPIIQTHQQLEQAREDHEAAAEM 61

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +    +E           +E EI ELE ++  LL P+D  D    ++EI++G GG EA
Sbjct: 62  ASEDAEFAEEAK-------RLETEIAELEEKLTDLLAPRDPHDGDDIVMEIKSGAGGEEA 114

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF G+L RMY+RYA    +  EVL  ++ D GG K++  +I  +       ++  KFE 
Sbjct: 115 ALFAGELARMYQRYAERHGFATEVLDLNETDLGGVKDMTMSIRSKQPSRDGAWAEFKFEG 174

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQR+P TE+ GR+ TSAA V V PE  E  DV I  +D+RID  R+SG GGQ VNT
Sbjct: 175 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDEKDLRIDVYRSSGKGGQGVNT 234

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QN+ RAM+VL ARL  +E ++   E +  R  QI 
Sbjct: 235 TDSAVRITHLPTGVVVTCQKERSQIQNKARAMQVLAARLQQMEEEKAEAEAAEGRAAQIR 294

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSERIRTYNF + R++DHRI      L+ VL G ++ +   L  A +A+ + + S
Sbjct: 295 TMDRSERIRTYNFPESRVSDHRIGYKANNLDAVLGGDLESLFAALKDADRARRLEAES 352


>gi|254497462|ref|ZP_05110255.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
 gi|254353277|gb|EET12019.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
          Length = 335

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 15/337 (4%)

Query: 17  AEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   +  S   +       L  E   +  ++  +S   Q   +  +L  +  + N + 
Sbjct: 2   EEVVRELESSTVWNNPEVAQALGRERTQLENVVFTLSGLSQSIIDLTELFELAREENDEQ 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            I ++      A  + I +   ++ +  +     D  +  L+I++G+GG+EA  +   L 
Sbjct: 62  AINEIG-----AELETIEQKVADLEFRRMFSGRMDGCNAYLDIQSGSGGTEAQDWAEMLL 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+     +  E++  S  D  G K       G   F  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
             R HTS A V + PE  +         D+RIDT RASG+GGQHVN TDSAVRITH P+G
Sbjct: 177 GNRRHTSFAAVFISPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSG 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
           I+V   +++SQH+N+ +AMK LRA+LY++E ++   E+ A    K  IG G    +IR+Y
Sbjct: 237 IVVQCQNDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              Q RI D R  +     + VL G +D  I   L A
Sbjct: 294 VLDQSRIKDLRTGVETSNTQAVLDGALDQFIEASLKA 330


>gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
 gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
          Length = 359

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   +      +       L  E  ++  ++  ++       + Q+L  + 
Sbjct: 22  DAKAERLHVVNAELESPDVWNDPKHAQDLGREKKSLETVVHTLADIANGLTDAQELFDLA 81

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + D+ +  +         +        + +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 82  AEDDDDATLAAVEADTNAIGARLEE-----LEFRRMFSNPADPLNCFMDIQAGAGGTEAQ 136

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y RY   + +K EVL  SD D  G K     I G   F  ++ E+GVHR+ 
Sbjct: 137 DWASILLRQYLRYCEHKDFKTEVLEESDGDVAGIKSATIKIEGEYAFGLLRTETGVHRLV 196

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++   HTS A+V V PE  E  ++DI   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 197 RKSPFDSANGRHTSFASVFVYPEVDESVEIDINPADLRVDTYRASGAGGQHINKTDSAVR 256

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +++SQH+NR  AM +L++RLY++E +    E+    + K  +G G  
Sbjct: 257 ITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYELEMRNRMAEQQKMEDSKTDVGWG-- 314

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 315 -HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 357


>gi|262373739|ref|ZP_06067017.1| peptide chain release factor 2 [Acinetobacter junii SH205]
 gi|262311492|gb|EEY92578.1| peptide chain release factor 2 [Acinetobacter junii SH205]
          Length = 351

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/340 (29%), Positives = 164/340 (48%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+   + +    +       + +E  ++   +       ++  + + +  +  + +
Sbjct: 18  ERLEEVLRELEDPAIWNDQSRAQAIAKEKGSLENTLGVFDRLAEQLDDAKAMLDLAVEAD 77

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +S + D+             +    + +  +  +  D   C LEI++G+GG+EA  +  
Sbjct: 78  DESLLEDVQAE-----LDSAEQALGNLEFRRMFSNPMDPNPCFLEIQSGSGGTEAQDWAS 132

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+     +K E++  SD D  G K     + G   +  ++ ESGVHR+ R   
Sbjct: 133 MLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYGWLRTESGVHRLVRKSP 192

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++   HTS + V V PE  +  ++DI   D+R DT RASG+GGQH+N TDSAVR+TH 
Sbjct: 193 FDSNNNRHTSFSAVFVSPEIDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHA 252

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI+V   +++SQH NR  A K LRA+LY++E  +         + K  IG G    +I
Sbjct: 253 PTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWG---SQI 309

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     RI D R  +     + VL G +D  I   L  
Sbjct: 310 RSYVLDDSRIKDLRTGVENSNTKAVLDGDLDKFIEASLKQ 349


>gi|172058432|ref|YP_001814892.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15]
 gi|229576666|sp|B1YLH0|RF2_EXIS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|171990953|gb|ACB61875.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15]
          Length = 366

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 166/346 (47%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHT 64
            +    +R  E+E  M+     +      +   E   +  ++ K        +     + 
Sbjct: 25  DLETKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMVDKYQHLADGHENIVLTYE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I +        +L        +K            +L     D  + ILE+  G GG+E
Sbjct: 85  LIKEEPDVELQEELESELGDIKKKFDE-----FELQILLNGEYDANNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+R+   + WKVE +     D+ G K +   I G   +  +K E G+HR
Sbjct: 140 SQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGHNAYGYLKAEKGIHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++SGR HTS  +  V+PE  +  D++I  ED+R+DT RASG+GGQH+NTTDSA
Sbjct: 200 LVRISPFDSSGRRHTSFVSCDVMPEFNDDIDIEIRTEDLRVDTYRASGAGGQHINTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           VRITH+PTG++V    E+SQ +NR  AMK+L+A+LY  E +    +    R  K  I  G
Sbjct: 260 VRITHVPTGVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQKKLDEIRGEKSDIAWG 319

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y F     + DHR N  +   +  + G I   I+  L 
Sbjct: 320 ---SQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYLR 362


>gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
           30120]
 gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
           30120]
          Length = 329

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 107/334 (32%), Positives = 178/334 (53%), Gaps = 15/334 (4%)

Query: 20  ELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
              + +    +       L +E +++  I+  I    Q  ++ + L  +  +   D E  
Sbjct: 2   NAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLTQGIEDVEGLLELAVEA-DDEETF 60

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           + A  E+ A++ ++ +LE    +  +     D   C ++++AG+GG+EA  +   L RMY
Sbjct: 61  NEAGAELDALQGKLEQLE----FRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  + +K E++  SD D  G K     I G   +  ++ E+GVHR+ R    ++ GR
Sbjct: 117 LRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGR 176

Query: 197 VHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS ++  + PE   +ID++I   D+RID  RASG+GGQHVN T+SAVRITHIPT I+ 
Sbjct: 177 RHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVT 236

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFS 312
              +++SQH+N+ +AM+ L+A+LY++E ++   ++      K  IG G    +IR+Y   
Sbjct: 237 QCQNDRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWG---SQIRSYVLD 293

Query: 313 QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             RI D R  +     + VL G +D  I   L A
Sbjct: 294 DARIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 327


>gi|315654795|ref|ZP_07907700.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333]
 gi|315490756|gb|EFU80376.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333]
          Length = 367

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 143/360 (39%), Positives = 207/360 (57%), Gaps = 19/360 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L   + ++E++MS+           K+   YA +S + + +  + Q + + +    +
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQGWLQARDDLEAGREM 70

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            G+   D +          A E+   +L       L P+D DD +  I+EI+AG GG E+
Sbjct: 71  AGE---DPDFAAEIPGLEAAFEQANADLIE----ALTPRDPDDARDVIMEIKAGEGGEES 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF GDL RMY+ YA    W V+VL  +++D GG K+               GV++ +K+
Sbjct: 124 ALFAGDLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKY 183

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHV 237
           E GVHRVQRVP TE+ GR+HTSAA V V+PEA E  D++I   D+RID  R+SG GGQ V
Sbjct: 184 EGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSV 243

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+V+  +EKSQ QN+   M+VLR+RL  +E ++   E +  R  Q
Sbjct: 244 NTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQ 303

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I   + A +A  + +  
Sbjct: 304 VRTVDRSERIRTYNFPENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDADEAARLAAVG 363


>gi|227875209|ref|ZP_03993351.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243]
 gi|269978100|ref|ZP_06185050.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1]
 gi|307700819|ref|ZP_07637844.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16]
 gi|227844114|gb|EEJ54281.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243]
 gi|269933609|gb|EEZ90193.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1]
 gi|307613814|gb|EFN93058.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16]
          Length = 366

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 139/361 (38%), Positives = 202/361 (55%), Gaps = 19/361 (5%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L   +A +E  MS+           ++   YA +  + +    + + + + +    +
Sbjct: 11  VEPLLEEYAAVEREMSDPDLHSDQSRARRVGRRYAELGRVAAAARAFLEAQDDLEAGREM 70

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +   D +          A +     L       L P+D DD +  I+EI+AG GG E+
Sbjct: 71  AAE---DPDFAAELPKLQEAFDTVQAALIEI----LTPRDPDDARDVIMEIKAGEGGEES 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF GDL RMY+ YA    W V++L  +++D GG K+               GV++ +K+
Sbjct: 124 ALFAGDLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLKY 183

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHV 237
           E GVHRVQRVP TE+ GR+HTSAA V V+PEA E  D++I   D+RID  R+SG GGQ V
Sbjct: 184 EGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSV 243

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTGI+V+  +EKSQ QN+   M+VLR+RL  +E+++   E +  R  Q
Sbjct: 244 NTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARASQ 303

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I   + A +A  + +  
Sbjct: 304 VRTVDRSERIRTYNFPENRIADHRTGYKAYNLDAVLNGELAPVIQSAIDADEAARLAAVG 363

Query: 357 E 357
           E
Sbjct: 364 E 364


>gi|218900306|ref|YP_002448717.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus G9842]
 gi|218544557|gb|ACK96951.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus G9842]
          Length = 380

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 111/347 (31%), Positives = 174/347 (50%), Gaps = 16/347 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           +   + + AE+E +M  +   D              +  ++      D+  +  +  H +
Sbjct: 41  LPTKEKQIAELEEKMMSAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEVTHEL 100

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +    +L       I++            LL  D  D  + ILE+  G GG+E+
Sbjct: 101 LKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTES 155

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR+
Sbjct: 156 QDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 215

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 216 VRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAV 275

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    +    R  Q  IG G 
Sbjct: 276 RITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWG- 334

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 335 --SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039699|gb|EEG49945.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
           10507]
          Length = 348

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 184/343 (53%), Gaps = 10/343 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + + + R  E+E  M      D   +  ++   +  +   +  Y+  + + +D+ T+I  
Sbjct: 1   MANKEKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEM 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +++   + +I+ +  E +     ++I    L     D    I+ + AG GG+E+  +
Sbjct: 61  GYEENDPDLIPEIQEMLDEFQKSF--DDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDW 118

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY R+A  + + +EVL   D D+ G K +   + G   +  +K E GVHR+ R+
Sbjct: 119 ASMLYRMYTRWADKKGFSLEVLDYLDGDEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRI 178

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS  +  V+P+  E  DV+I  +DIR+DT R+SG+GGQH+N T SA+RIT
Sbjct: 179 SPFNAAGKRQTSFVSCDVMPDIEEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRIT 238

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSE 304
           H+PTGI+V   +E+SQH N+ +AM++L+A+LY ++++    + S  R    +IG G+   
Sbjct: 239 HLPTGIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGN--- 295

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y       + DHR +     ++ V+ G ID  IN  L  
Sbjct: 296 QIRSYVMQPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYLKW 338


>gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 346

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 171/348 (49%), Gaps = 12/348 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQ 60
           +SH  +   + +  E+  +  E    +   K      +  AI  ++       +      
Sbjct: 1   MSHFDLTARRYKIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++ +     +  +          +E+ +   +    +L     D  S ILE+  G 
Sbjct: 61  ETQELLKE-----DFDEEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGA 115

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+E+  +   L+RMY R+A   ++KV VL     D+ G K I   + G   +  +K E 
Sbjct: 116 GGTESCDWADMLYRMYSRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEK 175

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHR+ R+   +A GR HTS A++ V+P+  +  +++I  ED+ ++T RASG+GGQH+N 
Sbjct: 176 GVHRLVRISPFDAGGRRHTSFASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINK 235

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+ H PTG++    + +SQH+NR  A++VL++RLY    +    + +   K ++ 
Sbjct: 236 TDSAVRMVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEI-KGEVK 294

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           + +   +IR+Y F     + DHR N     ++ V+ G +D  I   L 
Sbjct: 295 ANEWGSQIRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYLK 342


>gi|270290715|ref|ZP_06196939.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
 gi|270280775|gb|EFA26609.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
          Length = 343

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 107/337 (31%), Positives = 178/337 (52%), Gaps = 10/337 (2%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +   K  +     + + +K   +       ++L   +     +++     
Sbjct: 9   EAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLEMEADP--DV 66

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q E      +  +L  +    LL     D  + ILEI  G GG+E+  +   L RMY R+
Sbjct: 67  QAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQDWGSMLLRMYTRW 126

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A   ++KV++      +  G   +   + G   +  ++ E GVHR+ R+   +++GR HT
Sbjct: 127 AEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHT 186

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE    ++V+I  +D+R+D  R+SG+GGQH+N T SAVRITH+PTGI+V + 
Sbjct: 187 SFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVVASQ 246

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR+ AM +L+A+L+++E ++ A E++     Q  IG G    +IR+Y F    
Sbjct: 247 AERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWG---SQIRSYVFHPYS 303

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + DHR NL    ++ V+ G +DD IN  L     K 
Sbjct: 304 MVKDHRTNLETANVQGVMDGDLDDFINAYLQWKLQKR 340


>gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1]
 gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1]
          Length = 370

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 123/374 (32%), Positives = 192/374 (51%), Gaps = 30/374 (8%)

Query: 1   MVFLSHKQICDLKNRFA----------------EIELRMSESPSVDAYIKLTEEYAAISP 44
           M+    +++  L+N+F                 +++  M      +   K  E  +  + 
Sbjct: 1   MIMEFKEKLEQLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNA 60

Query: 45  IISKISIYDQKKQEEQDLHTVIG--DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
           I +KI   +  +++  D+   I   +   D E  D  + E+ A++KEI +LE       L
Sbjct: 61  IANKIQEIESVEKKINDIKEFIELLELEYDKETEDEIKREIEALDKEITKLET----ASL 116

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
             +  D K+ I+ ++AG+GG EA  +   L RMY R+A    + VE++    +D  G K 
Sbjct: 117 LSEEYDMKNAIVTLQAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKS 176

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLED 221
               + G   +  +K E GVHR+ R+   +A+ R HTS + V+V+PE   E+ V+I  ED
Sbjct: 177 ATFIVKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDEVKVEIKEED 236

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +RIDT RASG+GGQHVNTTDSAVRI HIPTGI V   SE+SQ QNR +A+++L+A+LY  
Sbjct: 237 LRIDTFRASGAGGQHVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQY 296

Query: 281 ERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYID 337
           E ++   ++      K  I  G    +IR+Y F   + + D R       ++ V+ G ID
Sbjct: 297 ELEKQKEKQKELEGEKKDISWG---SQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDID 353

Query: 338 DIINPLLTAHQAKM 351
             I   L    A+ 
Sbjct: 354 PFIESYLKWRAAEK 367


>gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42]
 gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY]
 gi|229576664|sp|A1W9H4|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790913|sp|B9MBK7|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp.
           JS42]
 gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
          Length = 367

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 171/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +   K   L +E  ++  ++  +     +  +  +L+ + 
Sbjct: 30  DAKFERLRTVNASLEDPAVWNDPKKAQELGKEKKSLDAVVLTLQKLTTELADNAELYEMS 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        +     + A  +++R L  E+ +  +  +  D  +C ++I+AG GG+EA 
Sbjct: 90  KEEGD-----EAGLTTIEAEAEKLRPLIEELEFRRMFSNEADPLNCFVDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y +YA  + +K  V   +  D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 145 DWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKIEGEYAYGLLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE  +  +++I   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V     +SQH NR  A + LR+RLYD E ++   E+    + K  +G G  
Sbjct: 265 LTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDTKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
           27405]
 gi|125713111|gb|ABN51603.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium
           thermocellum ATCC 27405]
          Length = 357

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 119/350 (34%), Positives = 187/350 (53%), Gaps = 10/350 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M + +   I  + N+  E+E + SE    +      +    I  + SK+  Y++   + +
Sbjct: 1   MKWGNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWE 60

Query: 61  DLHTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
           DL T+        D  +   A     A +KE   L        L     D  + +L + A
Sbjct: 61  DLITLCELGIEEQDESVIPEAVEGFKAFKKEFEAL----RLETLLTGQYDKNNALLTLHA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG+EA  +V  LFRMY R+A  + + V+VL   D ++ G K +   + G   +  +K 
Sbjct: 117 GAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKS 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           E GVHR+ R+   +ASGR HTS A++ V+PE   +I+V I  +D+RIDT R+SG+GGQH+
Sbjct: 177 EKGVHRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHI 236

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N T+SAVRITHIPTGI+V   SE+SQ QN+  AMK+L+A+L +++ +    +    + +Q
Sbjct: 237 NKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQ 296

Query: 297 IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +       +IR+Y F     + DHR N     ++ V+ G +D  IN  L+
Sbjct: 297 LE-IAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345


>gi|260220347|emb|CBA27793.1| Peptide chain release factor 1 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 329

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 144/277 (51%), Positives = 191/277 (68%), Gaps = 10/277 (3%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + +LE E+  +LLPKD DD +   +EIRAGTGG E+ALF  DL RMY RY   +  + E+
Sbjct: 49  MAQLEAELQRMLLPKDPDDARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEI 108

Query: 150 LSSSDNDDGGYKEIVATISGRG--------VFSRMKFESGVHRVQRVPATEASGRVHTSA 201
           +S+S+++ GGYKE+V  I G           +  +KFESG HRVQRVPATE  GR+HTSA
Sbjct: 109 MSASESELGGYKEVVLRIEGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSA 168

Query: 202 ATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            T+AVL E  E +   I   D+RIDT RASG+GGQH+N TDSAVRITHIPTGI+      
Sbjct: 169 CTIAVLAEQDEAEAIKINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDG 228

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQH N+ +A+KVL AR+++ +R   A + +A RK  +GSGDRS+RIRTYN+ QGR+TDH
Sbjct: 229 RSQHSNKAQALKVLTARIHEKDRSERAAKDAAERKSLVGSGDRSDRIRTYNYPQGRLTDH 288

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RINLTLYKL+  ++G +DD+I  L     A+ + +  
Sbjct: 289 RINLTLYKLDRAMEGDLDDVIEALQAYEAAQQLAALE 325


>gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
 gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
 gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
 gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
          Length = 357

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 10/350 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M + +   I  + N+  E+E + SE    +      +    I  + SK+  Y++   + +
Sbjct: 1   MKWGNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWE 60

Query: 61  DLHTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
           DL T+        D  +   A     A +KE   L        L     D  + IL + A
Sbjct: 61  DLITLCELGIEEQDESVIPEAVEGFKAFKKEFEAL----RLETLLTGQYDKNNAILTLHA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG+EA  +V  LFRMY R+A  + + V+VL   D ++ G K +   + G   +  +K 
Sbjct: 117 GAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKS 176

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           E GVHR+ R+   +ASGR HTS A++ V+PE   +I+V I  +D+RIDT R+SG+GGQH+
Sbjct: 177 EKGVHRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHI 236

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N T+SAVRITHIPTGI+V   SE+SQ QN+  AMK+L+A+L +++ +    +    + +Q
Sbjct: 237 NKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQ 296

Query: 297 IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +       +IR+Y F     + DHR N     ++ V+ G +D  IN  L+
Sbjct: 297 LE-IAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345


>gi|218906362|ref|YP_002454196.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH820]
 gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH820]
          Length = 380

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 175/347 (50%), Gaps = 16/347 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           +   + + AE+E +M  +   D              +  ++ K    D+  +  +  H +
Sbjct: 41  LPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHEL 100

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +    +L       I++            LL  D  D  + ILE+  G GG+E+
Sbjct: 101 LKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTES 155

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR+
Sbjct: 156 QDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 215

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 216 VRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAV 275

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G 
Sbjct: 276 RITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG- 334

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 335 --SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987]
 gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus ATCC 10987]
          Length = 380

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 175/348 (50%), Gaps = 16/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHT 64
            +   + + AE+E +M  +   D              +  ++ K    D+  +  +  H 
Sbjct: 40  DLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHE 99

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    +L       I++            LL  D  D  + ILE+  G GG+E
Sbjct: 100 LLKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTE 154

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR
Sbjct: 155 SQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 214

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++SGR HTS  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSA
Sbjct: 215 LVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSA 274

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VRITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G
Sbjct: 275 VRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG 334

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 335 ---SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
 gi|39984267|gb|AAR35654.1| peptide chain release factor 2, programmed frameshift [Geobacter
           sulfurreducens PCA]
 gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
          Length = 372

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 106/343 (30%), Positives = 169/343 (49%), Gaps = 10/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I   +    E+E +++     D   +  +     + I   I ++D+  ++  D+  +I 
Sbjct: 24  DIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNRQADDIRVLIE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 +  +    EV A+   +        +  +     D  SC + I AG GG+EA  
Sbjct: 84  LGEEAQD--EATLDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAGAGGTEAQD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY RY   + WK E+      D+ G K    T+ G   +  +K E+G+HR+ R
Sbjct: 142 WAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS A+V V PE  +     I   D+R+DT R+SG+GGQHVNTTDSAVR+
Sbjct: 202 ISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVNTTDSAVRL 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           TH+PTGI+V    E+SQH N+  A+++LRA+LY+ E +    + S     K  IG G   
Sbjct: 262 THLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKKDIGWG--- 318

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y       + D R  +     + VL G ++D +   L 
Sbjct: 319 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFLM 361


>gi|90409172|ref|ZP_01217287.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
 gi|90309717|gb|EAS37887.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
          Length = 349

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 168/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +      +       L +E +A+  I+  I   +    E   L  + 
Sbjct: 12  DVKVERLEEVTRELESPEVWNDPERAQALGKERSALELIVETIKALEIGCDEILMLVELA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D        + A         E+ +    + +  +    +D  SC L+I++G+GG+EA 
Sbjct: 72  VDEQDQDTFDEAANE-----TLELEKKLEVLEFRRMFSGKNDSCSCYLDIQSGSGGTEAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+     +K E++  S  D  G K      SG   +  ++ E+GVHR+ 
Sbjct: 127 DWANMLLRMYLRWGEANGYKTELMEVSAGDVAGIKGATIRFSGEYAYGWLRTETGVHRLV 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG+ HTS A+  V PE  +    +    ++RID  RASG+GGQHVNTT+SAVR
Sbjct: 187 RKSPFDSSGKRHTSFASAFVYPEVEDNIDIVINPAELRIDVYRASGAGGQHVNTTESAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE--RKRMANERSANRKLQIGSGDR 302
           ITH+PT I+V   +++SQH+N+ +AMK L+A+LY+ E   + +  + S + K  IG G  
Sbjct: 247 ITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLYEHEVQIQNVEKQISEDNKSDIGWG-- 304

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +++ I   L 
Sbjct: 305 -SQIRSYVLDDARIKDLRTGVESRNPQRVLDGELNEFIEASLK 346


>gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis AR01/DG]
 gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
          Length = 327

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 105/330 (31%), Positives = 175/330 (53%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M E    D      +     + +  K   + Q  +E  +L  +  +     D+EI++  +
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +  +++ +   E      LL  +  D  + ++E+  G GG+E+  +   L RMY R+A
Sbjct: 61  ERIHLLQERLTTYEL----SLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 ESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTS 176

Query: 201 AATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +V V+PE  +     I L+D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +
Sbjct: 177 FCSVDVMPELDDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQA 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    +IR+Y F     + 
Sbjct: 237 QRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N     ++ V+ G +D  I+  L   
Sbjct: 296 DHRTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus NVH0597-99]
 gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus NVH0597-99]
          Length = 380

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 175/347 (50%), Gaps = 16/347 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           +   + + AE+E +M  +   D              +  ++ K    D+  +  +  H +
Sbjct: 41  LPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHEL 100

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +    +L       I++            LL  D  D  + ILE+  G GG+E+
Sbjct: 101 LKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTES 155

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR+
Sbjct: 156 QDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 215

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  +++I  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 216 VRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAV 275

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G 
Sbjct: 276 RITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG- 334

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 335 --SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|116617317|ref|YP_817688.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272482|sp|Q03ZQ7|RF2_LEUMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116096164|gb|ABJ61315.1| bacterial peptide chain release factor 2 (bRF-2) [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 372

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 179/343 (52%), Gaps = 5/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A+ E RM+E    +   K  +     + + ++   +     + ++L  +I 
Sbjct: 25  DMEALTEEIADYENRMTEPDFWNDNEKAQKVIEENNVLKNRRDSFLNLTNQVEELELLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D E  D        + K  ++++      LL +  D   + ILEI  G+GG+E+  
Sbjct: 85  MAVEDPEDEDTLGELEAGVAKAQKDIDAYNLEQLLTEPYDA-NNAILEIHPGSGGTESTD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L+RMY R+A    ++VE L     D+ G       ++G   +  ++ E GVHR  R
Sbjct: 144 WGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFLRSEKGVHRFVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS  +V V+PE    I+V++  +D+++D  R+ G+GGQ+VN   + VR+
Sbjct: 204 ISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGVRL 263

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V+S+ E++Q+ NR  AM++L+++LY +E ++   ER+A    ++ +G    +
Sbjct: 264 THEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENG-WGSQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y     + + DHR N    + + VL G +D  IN  L   
Sbjct: 323 IRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365


>gi|326794289|ref|YP_004312109.1| peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
 gi|326545053|gb|ADZ90273.1| Peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
          Length = 364

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 181/344 (52%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +      KL +E + +  ++  +   +   ++ +DL  + 
Sbjct: 27  DAKKERLEEVSRELEDPEIWNDPEYAQKLGKERSTLEAVVETLDNLESGVEDSKDLLDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D++  +  ++E+  +++++ +LE    +  +     D  S  L+I++G+GG+EA 
Sbjct: 87  VEE-DDADSVEAVELELNDLDEQLAKLE----FRRMFSGEMDANSAFLDIQSGSGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   + +KVE++  S+ +  G K       G   F  ++ E+GVHR+ 
Sbjct: 142 DWANMLLRMYLRWGEDKGFKVELMEVSEGEVAGIKSATVRFEGEYAFGWLRTETGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V + PE  +  ++DI   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 202 RKSPFDSGNRRHTSFASVFLSPEIDDNVEIDINPADLRIDTYRSSGAGGQHVNTTDSAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDR 302
           ITH+PT  +V   +++SQH N+  AMK LRA+LY++E  +   A +   + K  IG G  
Sbjct: 262 ITHVPTNTVVQCQNQRSQHANKDFAMKQLRAKLYELEMLKRTEAAQALEDTKSDIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +       VL G +D  I   L  
Sbjct: 320 -SQIRSYVLDSSRIKDLRTGVESTNTGSVLDGSLDQFIVASLKQ 362


>gi|227817946|ref|YP_002817955.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. CDC 684]
 gi|229604792|ref|YP_002869406.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
           A0248]
 gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. CDC 684]
 gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
           A0248]
          Length = 380

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 16/347 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           +   + + AE+E +M  +   D              +  ++ K    D+  +  +  H +
Sbjct: 41  LPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHEL 100

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +    +L       I++            LL  D  D    ILE+  G GG+E+
Sbjct: 101 LKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNKAILELHPGAGGTES 155

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR+
Sbjct: 156 QDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 215

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 216 VRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAV 275

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G 
Sbjct: 276 RITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG- 334

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 335 --SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
 gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
 gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 357

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 178/354 (50%), Gaps = 16/354 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL--- 62
              +  L     E E RM+E    D      +     + +  K   + Q   E  DL   
Sbjct: 9   RFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGDLAVA 68

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           + ++ +        +                  +    LL     D  + ILEI  G GG
Sbjct: 69  YELLSEEPDAEMQAEFETDFQH-----AEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +E+  +   L RMY R+AA   +KVE +     D+ G K +   ISG   +  ++ E GV
Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A+V V+PE    +DVDI  ED++ID  RASG+GGQHVN T 
Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRITH+PTGI+V + +++SQ QNR  A+ +LRA+LY+ E ++ A ER+A +  Q  IG
Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            G    +IR+Y F     + DHR N   +  + V+ G +D  ++  L    A+ 
Sbjct: 304 WG---SQIRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWKLAQR 354


>gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21]
 gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21]
          Length = 382

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 172/344 (50%), Gaps = 12/344 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHT 64
           +I   K R  +++ +M+     D   K  +   E   +   +   +  + K  +   L  
Sbjct: 41  KIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSEVDTFTSLETKVDDLDTLWE 100

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D+ + ++      A           +   +L  D  D  + I+ + AG GG+E
Sbjct: 101 MAMEEKDDTLVSEMESELEGAKHTLSE-----LELGMLLSDEYDANNAIMNLHAGAGGTE 155

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  + G L RM+ RYA  + ++VE+L     ++ G K     I G   +  +K E GVHR
Sbjct: 156 AQDWTGMLLRMFTRYAEGKGFEVELLDVLPGEEAGTKSATLAIKGHNAYGFLKSEKGVHR 215

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS A V V+PE     +V+I ++D+R+D  RASG+GGQHVN T SA
Sbjct: 216 LVRISPFDSNARRHTSFAAVDVMPEIDNTVEVNINMDDVRVDYYRASGAGGQHVNKTSSA 275

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V   +E+SQ QN+ R +++LRA+L++ E+     + S        + + 
Sbjct: 276 VRMTHLPTGIVVQCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLA-GDYQAIEW 334

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y F     + DHR       ++ V+ G +D  +   L 
Sbjct: 335 GSQIRSYVFQPYTLVKDHRTGAETGNIQAVMDGDLDLFVESYLR 378


>gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
 gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 166/342 (48%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    D      K+  E + +S  I  +   +++ ++  +   +     
Sbjct: 15  RRLDELNARVEDPTLWDKPDEAQKINRERSKLSASIEAVRTLEKELKDAVEFAELGDMEG 74

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +S I +       A+ K ++          L     D     +EI +G GG+E+  + G
Sbjct: 75  DESLIEESR-----AMLKGLKAHAGRAELEALLSGEADGNDAYVEINSGAGGTESCDWAG 129

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A      VEV   +  +  G K     I G   +  +K E+GVHR+ R+  
Sbjct: 130 ILMRMYTRWATAHGMTVEVEEETSGEQAGIKSTTLMIKGENAYGWLKTEAGVHRLVRISP 189

Query: 191 TEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS A+V V P   +   +DI   D+R DT RASG+GGQH+N TDSAVR+THI
Sbjct: 190 FDSSARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHI 249

Query: 250 PTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI +   + +SQH NR  A K+LRARLY+ E ++    +    ++K  IG G    +I
Sbjct: 250 PTGIAVACQAGRSQHANRDEAWKMLRARLYEQELQKREAAQQALEDQKTDIGWG---HQI 306

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R N+     + VL G +D  +   L   
Sbjct: 307 RSYVLQPYQMVKDLRTNVETSDSQGVLDGDLDAFMGASLAQR 348


>gi|291087933|ref|ZP_06347924.2| peptide chain release factor 2 [Clostridium sp. M62/1]
 gi|291073455|gb|EFE10819.1| peptide chain release factor 2 [Clostridium sp. M62/1]
          Length = 343

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/339 (30%), Positives = 176/339 (51%), Gaps = 12/339 (3%)

Query: 14  NRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E++  M E    D      +L  E   +   +      +Q+ ++ Q +  +  + N
Sbjct: 2   KRIDELDKSMEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEEN 61

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             S I +        ++  + +LE      LL  + D+  + IL++ AG GG+EA  +  
Sbjct: 62  DPSLIPE----IQGMMDDFVEKLEAIRIQTLLSGEYDN-NNAILKLNAGAGGTEACDWCS 116

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L+RMY+R+A  + +   V+   D ++ G K I   I+G   +  +K E GVHR+ R+  
Sbjct: 117 MLYRMYQRWADKKGFTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISP 176

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
             ++G+  TS  +  V+P+  E  DV+I  +++RIDT R+SG+GGQH+N T SA+RITH+
Sbjct: 177 FNSAGKRQTSFVSCDVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHL 236

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PTGI+V   +E+SQ QN+  AM++L+ +LY ++++  A + S  R   +   +   +IR+
Sbjct: 237 PTGIVVQCQNERSQFQNKEVAMQMLKTKLYMLKQEEHAEKLSDIR-GDVKDINFGNQIRS 295

Query: 309 YNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y       + DHR       +  VL G ID  I+  L  
Sbjct: 296 YVMQPYTLVKDHRTGAESGNVNAVLDGDIDLFISAYLKW 334


>gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986]
 gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986]
          Length = 351

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +   + +  E++  M E    D      K+  E   +   + K +    + ++   L  +
Sbjct: 1   MDSKEKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEM 60

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + N +S I ++  +     ++        +    L     D  + I+++ AG GG+E+
Sbjct: 61  GYEENDESLIPEIEAMLEEFTKEIDA-----LKIATLLTGEYDSSNAIMKLNAGAGGTES 115

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L+RMY R+AA   + V+VL   + D+ G K +   I+G   +  ++ E GVHR+
Sbjct: 116 CDWCSMLYRMYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRL 175

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS  +  ++P+  E  DVDI  +D+RIDT R+SG+GGQH+N T SA+
Sbjct: 176 VRISPFNAAGKRQTSFVSCDIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAI 235

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTG++V   +E+SQ QN+ +AM++L+A+L+ ++++    + S  R   +      
Sbjct: 236 RITHIPTGVVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIR-GDVKDIGWG 294

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y       + DHR       +  V+ G ID  I   LT  
Sbjct: 295 NQIRSYVMQPYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYLTWQ 339


>gi|320540119|ref|ZP_08039774.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
 gi|320029785|gb|EFW11809.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
          Length = 325

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 111/331 (33%), Positives = 170/331 (51%), Gaps = 15/331 (4%)

Query: 23  MSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    +       L +E AA+  I++ I    Q  ++   L  +  +   +    +  
Sbjct: 1   MEQPDVWNEPERAQALGKERAALEAIVATIDQLAQGGEDVNGLLELAVEAEDEETFNEAV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 + K        + +  +     D   C L+I+AG+GG+EA  +   L RMY R+
Sbjct: 61  IELDQLMVKL-----ERLEFCRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +K EV+  SD D    K     I G   F  ++ E+GVHR+ R    ++ GR HT
Sbjct: 116 AEAKGFKTEVIEESDGDVARLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S ++V + PE   +ID++I   D+RID  RASG+GGQHVN T+SAVRITH+PT I+V   
Sbjct: 176 SFSSVFIYPEVDDDIDMEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +++SQH+N+ +A K LRA+LYD E ++   ++    + K  IG G    +IR+Y     R
Sbjct: 236 NDRSQHKNKDQAFKQLRAKLYDFEMQKKNADKQTMEDNKSDIGWG---SQIRSYVLDDSR 292

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           I D R N+     + VL G +D  I   L A
Sbjct: 293 IKDLRTNVETRNTQAVLDGDLDKFIEASLKA 323


>gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189040006|sp|A8AY61|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 364

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 187/345 (54%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E +M+E    D  I   +    ++ +      + Q      +   ++ 
Sbjct: 25  DLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLD 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  +++  + ++  +EK +   E      LL  +  D+ + ILEI  G+GG+EA  
Sbjct: 85  FLAEDDSVQEELEEKLAELEKMMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R
Sbjct: 141 WGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+
Sbjct: 201 ISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRL 260

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G   
Sbjct: 261 THIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWG--- 317

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y F+    + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 318 SQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 337

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 170/342 (49%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K R  E+   + +    +       + +E   +  +I+ +     + ++ + +  +  +
Sbjct: 2   KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVE 61

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + +S + D+      +      +   ++ +  +  +  D   C +EI++G+GG+EA  +
Sbjct: 62  ADDESLLEDVQ-----SELGAAEDELAKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDW 116

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+     +K E++  SD D  G K     + G   +  ++ ESGVHR+ R 
Sbjct: 117 ASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRK 176

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++  R HTS + V + PE    I++DI   D+R DT RASG+GGQH+N TDSAVR+T
Sbjct: 177 SPFDSGNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLT 236

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSE 304
           HIPTGI+V   +++SQH NR  A K LRARLY++E ++         + K  IG G    
Sbjct: 237 HIPTGIVVACQNQRSQHANRDHAWKQLRARLYELEMQKRNEAAQALEDSKSDIGWG---S 293

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R  +       VL G +D  I   L  
Sbjct: 294 QIRSYVLDDSRIKDLRTGVENSNTGAVLDGDLDRFIEASLKQ 335


>gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 366

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 178/348 (51%), Gaps = 16/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   ++   +++  M      D      K++ + A +   +S      Q  ++ + L  
Sbjct: 24  DIAGKESEIEKLDKLMMAPGFWDDQAQAQKISRQQAVLKDSVSLYGELRQSLEDLEVLAE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + + D  +R+ A+       +        +   +L     D  + I+ + AG GG+E
Sbjct: 84  LAQEEDDDIALRETAKDLKQLELRVSE-----LELDVLLSGEYDRGNAIISLHAGAGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +V  L RM+ R+A   +++V VL     D+ G K +   I G   F  +K E GVHR
Sbjct: 139 AQDWVEMLLRMFTRWAEDHRYRVIVLDMLSGDEAGIKSVTVEIVGPNAFGYLKSEKGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   + +GR HTS A+V VLPE  E  D++I  ED++IDT RA G+GGQHVN TDSA
Sbjct: 199 LVRISPFDTAGRRHTSFASVEVLPEVDEDVDIEIKTEDLKIDTFRAGGAGGQHVNKTDSA 258

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSG 300
           VRITH+PTGI+V   +E+SQ  NR  AMK+L+A+L ++E ++   E ++ R    +I  G
Sbjct: 259 VRITHLPTGIVVSCQNERSQLSNRNSAMKLLKAKLAELELQKKEAEMASLRGDHQEIAWG 318

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y F     + DHR       +E V+ G +D  +   L   
Sbjct: 319 ---SQIRSYVFHPYSLVKDHRTGAETGNIEAVMNGELDKFMAAFLLWQ 363


>gi|119384552|ref|YP_915608.1| peptide chain release factor 2 [Paracoccus denitrificans PD1222]
 gi|119374319|gb|ABL69912.1| bacterial peptide chain release factor 2 (bRF-2) [Paracoccus
           denitrificans PD1222]
          Length = 402

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 172/348 (49%), Gaps = 11/348 (3%)

Query: 15  RFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  E+   +             KL  +   +S  +      + + ++  +L  +      
Sbjct: 58  RLEELNAMIEAGDIWSDQARAQKLMRDRQMLSDAVETYRRIESELKDNAELIELGEAEGD 117

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  + D          K + EL  +     L     D     LEI AG GG+E+A +   
Sbjct: 118 DEIVADAEAA-----LKSLAELAAQKELEALLNGEADGNDTFLEINAGAGGTESADWASM 172

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A  + + VE+LS +  ++ G +     ISG   +  +K ESGVHR+ R+   
Sbjct: 173 LARMYVRWAEKKGYSVELLSETPGEEAGIRSAAYKISGPNAYGWLKSESGVHRLVRISPY 232

Query: 192 EASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS ++V V P     I++ IP  +IRIDT R+SG+GGQHVNTTDSAVRITH+P
Sbjct: 233 DSAARRHTSFSSVWVYPVVDDNIEITIPDNEIRIDTYRSSGAGGQHVNTTDSAVRITHLP 292

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           TGI+VTSSEKSQHQNR  AM  L+ARLY +E  +     +A  + + G      +IR+Y 
Sbjct: 293 TGIVVTSSEKSQHQNRANAMAALKARLYQLELDKRNAAINAQHEAK-GDAGWGNQIRSYV 351

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
               + + D R        + VL G +D  +   L    A    + ++
Sbjct: 352 LHPYQMVKDLRTGHETSDTQGVLDGALDAFMAATLALDVAGKSRAEAQ 399


>gi|167462917|ref|ZP_02328006.1| peptide chain release factor 2 in translation [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322383023|ref|ZP_08056853.1| peptide chain release factor 2-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153046|gb|EFX45506.1| peptide chain release factor 2-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 332

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 113/330 (34%), Positives = 168/330 (50%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M+     D   K  +  A ++ I   +  +     E  D+  +  + +   D  +     
Sbjct: 1   MAAPDFWDDQEKAQKTIAELNAIKGSVEQFQALSSEFGDIEVMAQLAEEEDDESLAAEVA 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +  I  ++   E +    LL     D  + ILE+  G GG+E+  +   L RMY R+A
Sbjct: 61  ESIKGIVGKLEGFELQ----LLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               +KVEVL     D+ G K +   I G   +  +K E GVHR+ R+   +ASGR HTS
Sbjct: 117 EKHDFKVEVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTS 176

Query: 201 AATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +  V+PE  +  DV+I  ED++IDT RASG+GGQH+NTTDSAVRITHIPTGI+V   +
Sbjct: 177 FVSCDVVPEIDDDVDVEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQT 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           E+SQ +NR RAMK+LR++LY+ + +      +  R  Q        +IR+Y F     + 
Sbjct: 237 ERSQIKNRERAMKLLRSKLYEKKIEEQEKHLAEIRGEQ-SDIAWGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +        V+ G +D  I+  L   
Sbjct: 296 DHRTSAETGNAGAVMDGDLDMFIDAYLRQQ 325


>gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187]
          Length = 380

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 16/347 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           +   + + AE+E +M  +   D              +  ++      D+  +  +  H +
Sbjct: 41  LPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHEL 100

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +    +L       I++            LL  D  D  + ILE+  G GG+E+
Sbjct: 101 LKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTES 155

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR+
Sbjct: 156 QDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 215

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  +++I  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 216 VRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAV 275

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G 
Sbjct: 276 RITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG- 334

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 335 --SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA]
          Length = 343

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 181/341 (53%), Gaps = 6/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + + + +  E+E  M      D      ++   +  +   +  Y     + +D+ T+I  
Sbjct: 1   MANKEQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEM 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +++   + +I+ +  E +     + I    L     D ++ I+++ AG GG+EA  +
Sbjct: 61  GYEENDPALIPEIQEMLDEFQKDF--DNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDW 118

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G L+RMY R+A  + + +EVL   D D+ G K +   ++G   +  +K E GVHR+ R+
Sbjct: 119 CGMLYRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRI 178

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS  +  V+P+  +  DV+I  ++IRIDT R+SG+GGQH+N T SA+RIT
Sbjct: 179 SPFNAAGKRQTSFVSCDVMPDIKKDLDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRIT 238

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H PTGI+V   +E+SQH N+ +AM++L+A+LY ++++    + S  R  ++       +I
Sbjct: 239 HYPTGIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIR-GEVTDIGWGNQI 297

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y       + DHR N     ++ VL G ID  IN  L  
Sbjct: 298 RSYVMQPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKW 338


>gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
 gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
          Length = 373

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 183/346 (52%), Gaps = 6/346 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   I  + +  AE+E + SE    +      +       + +KI  ++    + +DL
Sbjct: 21  MRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNITSQWEDL 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            T+        E  +    EV     +++     +    L     D  + IL + AG GG
Sbjct: 81  FTLAEL--GLEEQDESVIPEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLHAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +V  L RM+ R+   + ++V++L   D D+ G K +   + G   +  +K E GV
Sbjct: 139 TEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   ++SGR HTS A++ V+PE    I+++I  +D+RIDT RASG+GGQH+N TD
Sbjct: 199 HRLVRISPFDSSGRRHTSFASLDVMPELDDTIEININPDDLRIDTYRASGAGGQHINKTD 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+RITHIPTG++V   +E+SQ QN+  AMK+L+A+L++++ +    +    + +Q+   
Sbjct: 259 SAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGVQM-DI 317

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y F     + DHR N     ++ V+ G +D  IN  L+
Sbjct: 318 AWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLS 363


>gi|256833004|ref|YP_003161731.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
 gi|256686535|gb|ACV09428.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
          Length = 361

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 137/348 (39%), Positives = 198/348 (56%), Gaps = 19/348 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L   +A+IE ++S++          +L   YA +  ++S    +     +      +
Sbjct: 8   VEPLLGEYADIEAQLSDASVHSDQARARQLGRRYAELGQVVSAYRAWRSATDDLDAARDM 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +   D    +       A  +    L      +L+P+D DD +  ILEI+AG GG+E+
Sbjct: 68  AEE---DPSFAEEIPAMEHAAAEASERL----RRVLIPRDPDDSRDVILEIKAGEGGAES 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF  DL RMY RYA  + W+ E++ ++++D GGYK++   +          GV++ +K+
Sbjct: 121 ALFAADLLRMYLRYAERQGWRTEIIGATESDLGGYKDVQVAVKARGQVTPEEGVWAHLKY 180

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHV 237
           E GVHRVQRVP TE+ GR+HTSA  V V PE  +    +I   D+RID  R+SG GGQ V
Sbjct: 181 EGGVHRVQRVPVTESQGRIHTSAVGVLVFPEVEDEGELEIDQNDLRIDVYRSSGPGGQSV 240

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITHIPTGI+V+  +EKSQ QNR +AM+VLRARL    ++  A      R+ Q
Sbjct: 241 NTTDSAVRITHIPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAAQDMRRSQ 300

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           + + DRSERIRTYNF + RI DHR     Y L+ VL G +  ++   +
Sbjct: 301 VRTVDRSERIRTYNFPENRIADHRTGFKSYNLDQVLDGDVQPVVQSAI 348


>gi|170289255|ref|YP_001739493.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
 gi|281412857|ref|YP_003346936.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
 gi|170176758|gb|ACB09810.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
 gi|281373960|gb|ADA67522.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
          Length = 342

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 148/335 (44%), Positives = 206/335 (61%), Gaps = 16/335 (4%)

Query: 22  RMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQ 80
            ++      +       EYA I  I +  +   + ++  + L                  
Sbjct: 11  LLARPDLTPEQMKNYGIEYAKIEEIENIANRIKETQEFIELLR--------------EEG 56

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
              L IEK  +EL+     LLL   ++     I+EIR G GG EAALF  DLFRMY RYA
Sbjct: 57  ENELEIEKYEKELDQLYQELLLLLSSEVGDKAIVEIRPGAGGEEAALFARDLFRMYTRYA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + W +EV    + D GG +E+V  + G+  +  +K+ESGVHRVQR+P TE+ GR+HTS
Sbjct: 117 ERKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRIPVTESGGRIHTS 176

Query: 201 AATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            ATVAVLPE  E D++I  ED++I+T RASG GGQ+VN T+SAVRITHIPTGI+V   +E
Sbjct: 177 TATVAVLPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQ+QNR  A+++LRARLY +++++   E S  RK QIG+G+RSE+IRTYNF Q R+TDH
Sbjct: 237 RSQYQNRQTALRILRARLYQLQKEQKEREISQKRKSQIGTGERSEKIRTYNFPQNRVTDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RIN T Y+L+ +L G +D+II+ L+       +  
Sbjct: 297 RINYTSYRLQEILDGDLDEIISKLIEHDIENNLEE 331


>gi|182677929|ref|YP_001832075.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633812|gb|ACB94586.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 376

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 169/346 (48%), Gaps = 10/346 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           H  +     R  E+  ++      +      +     + +  ++    Q + +  D  T+
Sbjct: 22  HLDVDTSTRRLEELNAKVENPDLWNDAEAAQKIMRERTELEERLGSIKQFEGDLDDAATL 81

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I    ++ +     +   L    +I           L     D     +E+ +G GG+E+
Sbjct: 82  IELAEAEGDEASEKEGIDLLKGLKIEA--ERRQIEALLSGEVDSNDTYIEVHSGAGGTES 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   LFRMY R+A   ++KVE++  +  D+ G K     + G       K ESGVHR+
Sbjct: 140 CDWARMLFRMYARWAERHRFKVEIIEETAGDEAGIKSATLLVKGHNAHGWAKTESGVHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ R HTS A+V V P    +I++D+   D RIDT R+SG+GGQH+NTTDSAV
Sbjct: 200 VRISPFDSNARRHTSFASVWVYPVIDDKIEIDVKESDCRIDTYRSSGAGGQHINTTDSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHIP+GI+V    E+SQH+NR  A  +LRARLY+ E +R   E +A    K +IG G 
Sbjct: 260 RITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEKELERREAEANATEATKTEIGWG- 318

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y     + + D R   T    + VL G +D  +   L  
Sbjct: 319 --HQIRSYVLQPYQLVKDLRTGTTSGTPDEVLDGDLDTFMEAALAQ 362


>gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
 gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
          Length = 368

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 6/347 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +   + + AE+E +M E    D   +  +    ++ I   +  Y +   +  D 
Sbjct: 19  MGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDA 78

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++     +++     +++      +    E E+  L       D  + IL + AG GG
Sbjct: 79  QALLEMALEENDTSLEPEVQTEFETIKTAVRELELEVL--LSGPYDANNAILTLHAGAGG 136

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY R+A    + V        D+ G K     I+G   +  +K E GV
Sbjct: 137 TEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGV 196

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +++ R HTS +   ++PE  + ++V I + D+R+DT RASG+GGQH+N T 
Sbjct: 197 HRLVRISPFDSNARRHTSFSACDIMPEIDDAVEVAINMADVRVDTYRASGAGGQHINKTS 256

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH+PTGI+V   +E+SQ QNR + MK+LRA+L+++E+++   E       Q    
Sbjct: 257 SAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQK-I 315

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +   +IR+Y F     + D R  +    ++ V+ G +D  I   L A
Sbjct: 316 EWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAA 362


>gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060]
 gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 375

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 169/342 (49%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R AE+  R  +    +      K+  E   +   +S I   +Q  ++   L  +     
Sbjct: 30  KRLAELNARSEDPALWNDPEAAQKVMRERTQLEEAVSAIRRLEQGLEDAATLIELGEMEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            ++ IR+  +       +  R          L     D     LE+ AG GG+E+  +  
Sbjct: 90  DEASIREGEEQIRAVQAEAAR-----RQIETLLAGEADGNDTYLEVHAGAGGTESQDWAN 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  RK+KVE++  S+ ++ G K     I G   +  +K ESGVHR+ R+  
Sbjct: 145 MLHRMYARWAERRKYKVEIVEWSEGEEAGIKGATLLIKGHNAYGWLKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS A+V V P     I +++   D RIDT R+SG+GGQHVNTTDSAVRITHI
Sbjct: 205 YDSNARRHTSFASVWVYPVIDDRITIEVKESDCRIDTYRSSGAGGQHVNTTDSAVRITHI 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTGI+V    E+SQH+NR  A  +LRARLY++E K+   + +A    K  IG G    +I
Sbjct: 265 PTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKANAEAASKTDIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R          VL G ID  I   L   
Sbjct: 322 RSYVLQPYQLVKDLRTGAQSTSPGDVLDGEIDPFIEASLAQR 363


>gi|307822369|ref|ZP_07652601.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96]
 gi|307736935|gb|EFO07780.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96]
          Length = 347

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 168/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +      D       L +E   +  I++ I+  ++   + ++L  + 
Sbjct: 10  DVKSERLVEVLRELENPKIWDNPEEAQALGKERGQLEVIVNTINDLERGLSDAEELLLMA 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                  E  +     V+   +   +   ++ +  +     D  +  L+I++G+GG+EA 
Sbjct: 70  V-----EEDDEETVETVVDDLEHFEKRVADLEFRRMFSGQMDANNAFLDIQSGSGGTEAQ 124

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+   + +K E++  S  D  G K       G   F  ++ E+GVHR+ 
Sbjct: 125 DWASIIERMYLRWGEQKGFKTELIEESQGDVAGIKSATIKFEGEYAFGWLRTETGVHRLV 184

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V V PE  +         DIR+D  RASG+GGQH+N T+SAVR
Sbjct: 185 RKSPFDSGNRRHTSFASVFVSPEIDDDIDIDINPADIRVDVYRASGAGGQHINKTESAVR 244

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           +TH PTGI+V   S++SQH+NR  AMK L+A+LY++E ++ +   +   + K  IG G  
Sbjct: 245 MTHNPTGIVVQCQSDRSQHKNRDTAMKQLKAKLYELEMRKRSETAQALEDTKSDIGWG-- 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y   Q RI D R N+     + VL G +D  I   L 
Sbjct: 303 -SQIRSYVLDQSRIKDLRTNVETGNTQAVLDGDLDQFIEASLK 344


>gi|308535208|ref|YP_002137819.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
 gi|308052553|gb|ACH38023.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
          Length = 371

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 178/343 (51%), Gaps = 11/343 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + D K R  E+E   S     +      +   + + +   ++ ++   ++ +D+  +I  
Sbjct: 25  VDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTTWESLDKQARDIKELIEL 84

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + + +  +    EV A+  ++    ++  +  +     D     + I +G GG+E+  +
Sbjct: 85  GSEEQD--EATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSINSGAGGTESQDW 142

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RY   + WK E+    + D  G K +   ++G   +  +K E+G+HR+ R+
Sbjct: 143 AEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYLKAEAGIHRLVRI 202

Query: 189 PATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
              ++S R HTS A+  V P  E  +I++ I   D+RIDT R+SG+GGQHVNTTDSA+RI
Sbjct: 203 SPFDSSARRHTSFASAFVFPVIEEEDIEIKIAESDLRIDTYRSSGAGGQHVNTTDSAIRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           THIPTG +V   SE+SQH N+  AMKVLR++LY++E +    + S     K +IG G   
Sbjct: 263 THIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAGEKKEIGWG--- 319

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y       + D R  +     + VL G +DD + P L 
Sbjct: 320 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGSLDDFVVPYLM 362


>gi|71281667|ref|YP_270738.1| peptide chain release factor 2, programmed frameshift [Colwellia
           psychrerythraea 34H]
 gi|123631202|sp|Q47WT4|RF2_COLP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71147407|gb|AAZ27880.1| peptide chain release factor 2, programmed frameshift [Colwellia
           psychrerythraea 34H]
          Length = 365

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 110/339 (32%), Positives = 183/339 (53%), Gaps = 15/339 (4%)

Query: 14  NRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+   +      +       L +E +++  +++ I   +   ++ + L  +  +  
Sbjct: 32  ERLVEVSRELELPDVWNEPERAQALGKERSSLEEVVNTIVELETGCEDIEGLVELAVEE- 90

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           SD E  D A++E  A++K + +LE    +  +     D  +  L+I++G+GG+EA  +  
Sbjct: 91  SDQETFDDAEVEADALDKVLEKLE----FRRMFSGEQDANNSYLDIQSGSGGTEAQDWAE 146

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+     +K EV+  +D D  G K      +G   +  ++ E+GVHR+ R   
Sbjct: 147 MLMRMYLRWGEAHGYKTEVIEVTDGDVAGIKGCTIKYTGEYAYGWLRTETGVHRLVRKSP 206

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++SGR HTS A+  + PE  +  ++DI   D+RIDT RASG+GGQHVN TDSA+RITH 
Sbjct: 207 FDSSGRRHTSFASAFIYPEIDDNIEIDINPADLRIDTFRASGAGGQHVNKTDSAIRITHE 266

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTG +V   +++SQH+NR  AMK+L+A+LY++E ++  +++    + K  IG G    +I
Sbjct: 267 PTGAVVACQADRSQHKNRATAMKLLKAKLYEMEMQKQNSDKQVLEDGKSDIGWG---SQI 323

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y     RI D R  +     + VL G +D  +   L 
Sbjct: 324 RSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFLEASLK 362


>gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH187]
          Length = 380

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 16/347 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           +   + + AE+E +M  +   D              +  ++      D+  +  +  H +
Sbjct: 41  LPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHEL 100

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +    +L       I++            LL  D  D  + ILE+  G GG+E+
Sbjct: 101 LKEEYDEDLHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTES 155

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR+
Sbjct: 156 QDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 215

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  +++I  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 216 VRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAV 275

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G 
Sbjct: 276 RITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG- 334

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 335 --SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
           20731]
 gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
           20731]
          Length = 366

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 171/344 (49%), Gaps = 12/344 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
           +I   + R  ++E +M+     D   K     +E   +   +        K  + + L  
Sbjct: 25  KIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTEVETYHGLAAKLDDVETLWE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   DS   ++ +    A +         +   +L  D  D  + IL + AG GG+E
Sbjct: 85  MAMEEKDDSLQGEIEEEVENARKTLAD-----LELGMLLSDQYDANNAILTLHAGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY RYA  + + VE+L     ++ G K    T+ G   +  +K E GVHR
Sbjct: 140 AQDWTNMLLRMYTRYAEQKGFTVELLDVLPGEEAGIKSATLTVQGHNAYGYLKSEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+ R HTS A V V+PE    ++V++ ++D+R+D  RASG+GGQHVN T SA
Sbjct: 200 LVRISPFDANARRHTSFAAVDVMPELDETVEVNLNMDDVRVDYYRASGAGGQHVNKTSSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V   +E+SQ QN+ R + +LRA+LY+ E+     + S        + + 
Sbjct: 260 VRMTHIPTGIVVQCQNERSQLQNKERCLALLRAKLYEYEKAIQDKKISELA-GDYQAIEW 318

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y F     + DHR       ++ V+ G +D  +   L 
Sbjct: 319 GSQIRSYVFQPYTMVKDHRTGAETGNIQAVMDGDLDPFVEAYLR 362


>gi|126642199|ref|YP_001085183.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
          Length = 296

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 153/292 (52%), Positives = 215/292 (73%), Gaps = 2/292 (0%)

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              SD + +D+A+ E+ A +  + ELE+++N L++PKD +D  +  LEIRAGTGG EAA+
Sbjct: 1   MMKSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAI 60

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F GDLFRMY +YA  + W++EVLS ++ + GG+KE++  + G GV+ R+KFESG HRVQR
Sbjct: 61  FSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQR 120

Query: 188 VPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           VPATE+ GRVHTSA TVA+LPE   + +V+I   D+RIDT RASG+GGQH+N TDSAVRI
Sbjct: 121 VPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRI 180

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+  +GSGDRSER
Sbjct: 181 THIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSER 240

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           IRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +   ++
Sbjct: 241 IRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAMLAQ 292


>gi|269957243|ref|YP_003327032.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305924|gb|ACZ31474.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 366

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 142/358 (39%), Positives = 206/358 (57%), Gaps = 15/358 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L    AEIE  +++            L   YA ++ ++     +   + + +    ++  
Sbjct: 12  LLAEHAEIERALADPAVHADAGRARTLGRRYAELNQVVGAYRAWAAARDDAEAAAELLEL 71

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            +   E        + A E +       +  +L+P+D DD +  ILEI+AG GG E+ALF
Sbjct: 72  SDGLEEELAAELPGLQAAEADAA---EHLRRVLVPRDPDDGRDVILEIKAGEGGEESALF 128

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV-------FSRMKFESG 181
            GDL RMY RYA  + W  +VL ++D D GGYK++   I  R V       ++ +K+E G
Sbjct: 129 AGDLLRMYLRYAERKGWSTQVLEATDTDLGGYKDVQVAIKARSVNDPGDGVWAHLKYEGG 188

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTT 240
           VHRVQRVP TE  GR+HTSAA V V PE  +  +V+I   D+RID  R+SG GGQ VNTT
Sbjct: 189 VHRVQRVPVTETQGRIHTSAAGVLVFPEVDDPGEVEIDPNDLRIDVYRSSGPGGQSVNTT 248

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V+  +EKSQ QN+ +AM+VLRARL   +++  A + +  R+ Q+ +
Sbjct: 249 DSAVRITHLPTGIVVSMQNEKSQLQNKEQAMRVLRARLLAAQQEEAAAQAADLRRSQVRT 308

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            DRSERIRTYNF + RI DHR     Y L+ VL G ++ ++   + A +A  +    +
Sbjct: 309 VDRSERIRTYNFPENRIADHRTGYKAYNLDAVLGGDLEPVVRSAIEADEAARLAGFGD 366


>gi|256825643|ref|YP_003149603.1| peptide chain release factor 1 [Kytococcus sedentarius DSM 20547]
 gi|256689036|gb|ACV06838.1| bacterial peptide chain release factor 1 (bRF-1) [Kytococcus
           sedentarius DSM 20547]
          Length = 357

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 136/364 (37%), Positives = 205/364 (56%), Gaps = 19/364 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             + + +     A +E  M+    V     +      YAA+ P+    +  +  +Q+   
Sbjct: 1   MSEALGEALAEHARLEAEMARPEVVGDPARFRAAARGYAALEPVARAAARREAAEQDL-- 58

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
                      +        E+ A+ +E+   +  +   L+P+D DDD+  ILE++AG G
Sbjct: 59  -----AAARELAAEEPDFAAELPALVEELEAAQEALTRALVPRDPDDDRDVILEVKAGEG 113

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV-------FS 174
           G E+ALF  +L RMY R+A  R W   VL S+ +D GG K+    I  RG        ++
Sbjct: 114 GQESALFAHELVRMYLRHAERRGWAATVLESTASDLGGVKDARVAIRARGAGEPGDAPWA 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSG 233
           R+KFE GVHRVQRVP TE+ GR+HTSA  V VLPE  +  +V+I   D+++D  R+SG G
Sbjct: 174 RLKFEGGVHRVQRVPVTESQGRIHTSAVGVLVLPEVDDPGEVEIAPADLKVDVYRSSGPG 233

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVR+TH+PTG++V   +EKSQ QN+  A++VL +RL  +  +    E S  
Sbjct: 234 GQSVNTTDSAVRLTHLPTGVVVTCQNEKSQLQNKEAALRVLASRLRRMALEEAQAEVSQA 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           R+ Q+ + DRSER+RTYNF + R++DHR     + L  VL G +D +I+ L+  H+A+++
Sbjct: 294 RRAQVRTVDRSERVRTYNFPESRVSDHRTGYKAHNLPAVLDGDLDAVIDSLVADHEAQLL 353

Query: 353 GSAS 356
               
Sbjct: 354 AGEG 357


>gi|222100202|ref|YP_002534770.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
 gi|221572592|gb|ACM23404.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
          Length = 349

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 149/326 (45%), Positives = 204/326 (62%), Gaps = 15/326 (4%)

Query: 30  DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKE 89
           +       EYA +  I S ++               I +     E+    + +   I++ 
Sbjct: 27  EEMKNYGIEYAKLEEIESVVNR--------------IRETQEFIELLKEEEEDEQEIDRY 72

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
            +EL++    L L    +     I+EIR GTGG EAALF  DLFRMY RYA  + W VE+
Sbjct: 73  EKELDSLFQELFLLLSPETGDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWDVEI 132

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
               + D GG KE V  + G+  +S +K+ESGVHRVQRVP TE+ GR+HTS ATV VLPE
Sbjct: 133 AEMHETDLGGVKEAVFFVKGKNAYSILKYESGVHRVQRVPITESGGRIHTSTATVVVLPE 192

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLR 268
             E D++I  ED++I+T RASG GGQ+VN T+SAVRITHIPTGI+V   +E+SQ+QN+  
Sbjct: 193 IEERDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQNKQT 252

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKL 328
           A+++LRARLY ++R+++  E S  RK QIG+G+RSE+IRTYNF Q R+TDHRIN T Y+L
Sbjct: 253 ALRILRARLYQLQREQLEKELSQKRKSQIGTGERSEKIRTYNFPQNRVTDHRINYTSYRL 312

Query: 329 EYVLQGYIDDIINPLLTAHQAKMIGS 354
           + +L G +D+II  L+       I  
Sbjct: 313 QEILDGDLDEIIAKLIEHDIENNIEE 338


>gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4]
 gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4]
          Length = 377

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 113/354 (31%), Positives = 172/354 (48%), Gaps = 12/354 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   + R A +E  M              +T+E A++   + +     +  +E   L  
Sbjct: 24  DLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQCLGRFYRLREGHEELSVLLE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +      + +LAQ       +        +   LL     D  + I+ + AG GG++
Sbjct: 84  LAAEEGDAQVLAELAQDVKKLAGEIED-----LEVELLLSGPYDASNAIVSLHAGAGGTD 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +V  L RMY R+A    +++  L     ++ G K +   + G   +  +K E GVHR
Sbjct: 139 AQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVIGPRAYGYLKAERGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +ASGR HTS A+V VLP   +     I  E++RIDT RASG+GGQHVN T++A
Sbjct: 199 LIRISPFDASGRRHTSFASVDVLPAVKDDTEIKIAPEELRIDTFRASGAGGQHVNKTETA 258

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI V   SE+SQ  N+  AM++LRARL D++ K    E +A R  ++     
Sbjct: 259 VRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKEREKELAALR-GEVKEIAW 317

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             +IRTY       + DHR  +    ++ VL G IDD I   L     K   +A
Sbjct: 318 GNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLKVEARKQAEAA 371


>gi|227431353|ref|ZP_03913406.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352946|gb|EEJ43119.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 372

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 178/343 (51%), Gaps = 5/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A+ E RM+E    +   K  +     + + ++   +     + ++L  +I 
Sbjct: 25  DMEALTEEIADYENRMTEPDFWNDNEKAKKVIEENNVLKNRRDSFLNLTNQVEELELLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D E  D        +    ++++      LL +  D   + ILEI  G+GG+E+  
Sbjct: 85  MAVEDPEDEDTLGELEAGVANAQKDIDAYNLEQLLTEPYDA-NNAILEIHPGSGGTESTD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L+RMY R+A    ++VE L     D+ G       ++G   +  ++ E GVHR  R
Sbjct: 144 WGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFLRSEKGVHRFVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS  +V V+PE    I+V++  +D+++D  R+ G+GGQ+VN   + VR+
Sbjct: 204 ISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGVRL 263

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V+S+ E++Q+ NR  AM++L+++LY +E ++   ER+A    ++ +G    +
Sbjct: 264 THEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENG-WGSQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y     + + DHR N    + + VL G +D  IN  L   
Sbjct: 323 IRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365


>gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
          Length = 327

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 173/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M E    D      +     + +  K   + Q  +E  +L  +  +     D+EI++  +
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +  +++ +   E      LL  +  D  + ++E+  G GG+E+  +   L RMY R+A
Sbjct: 61  ERIHLLQERLTTYEL----SLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 ESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTS 176

Query: 201 AATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +
Sbjct: 177 FCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQA 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+       +IR+Y F     + 
Sbjct: 237 QRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQME-ISWGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N     ++ V+ G +D  I+  L   
Sbjct: 296 DHRTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|294055147|ref|YP_003548805.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614480|gb|ADE54635.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
           45221]
          Length = 386

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 171/348 (49%), Gaps = 16/348 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLH 63
           K++ +++     +E +M+E    D      +  A    +   ++    ++ +  + Q + 
Sbjct: 30  KKLEEIEA----LEAQMAEPTFWDDQQAAQKVIAEANRLKAAVNPCRAFNAEVDDLQAML 85

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D +     Q  + A+   + +L + +          D  + +L I AG GG+
Sbjct: 86  ELVDEMGGDPDAAAYEQEVLDAVHALLPKL-DALELASFLTGPHDSCNALLTIHAGAGGT 144

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+  +   L RMY R+     + V++      ++ G       I G   +   K E GVH
Sbjct: 145 ESCDWADMLLRMYTRWGERAGFTVDIQDIMPGEEAGISSATIRIEGPNAYGYAKAERGVH 204

Query: 184 RVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +++ R HTS ++V V+     +ID+DIP  +IR D  RASG GGQHVN T+S
Sbjct: 205 RLVRISPFDSNARRHTSFSSVDVIAEIEDDIDLDIPESEIRTDVYRASGKGGQHVNRTES 264

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGS 299
           AVR+THIPT ++V   +E+SQ +N+  AM+ L++RLY+       +E       K  I  
Sbjct: 265 AVRLTHIPTNLVVTCQNERSQIKNKATAMRTLKSRLYEKMLDEKRSEMEKFYGEKGDIAW 324

Query: 300 GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           G+   +IR+Y F   + +TD R  L    ++ V+ G +D  ++  L A
Sbjct: 325 GN---QIRSYVFQPYQLVTDLRTGLKEGNVQGVMDGELDPFVHAWLRA 369


>gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4]
 gi|123517990|sp|Q2MGI2|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift
           [Streptococcus pneumoniae TIGR4]
          Length = 364

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 187/345 (54%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++ 
Sbjct: 25  DLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLD 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  + D    +      E+ ++       LL  +  D  + ILEI  G+GG+EA  
Sbjct: 85  FLAEDESVHDELVAQ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY RY   + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R
Sbjct: 141 WGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+
Sbjct: 201 ISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRL 260

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+V S+ +++Q+ NR RAMK+L+A+LY +E+ + A E  + +  K +I  G   
Sbjct: 261 THIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWG--- 317

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y F+    + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 318 SQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
 gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
          Length = 363

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 177/350 (50%), Gaps = 12/350 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
             +K R AE E    +    +   K  +    I  + ++I  ++    + +DL T+  + 
Sbjct: 12  EAVKKRIAEKEAVAGQEGFWNDPKKAEKLLTEIKKLKNRIEPWETLIADIEDLQTLYELT 71

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D++  D  Q   +++++     E      LL  + D      L + AG GG+EA  
Sbjct: 72  QEAGDADNADSVQEIDMSLKELQERFEKLNTLALLSDEVDG-SDAFLTVHAGAGGTEACD 130

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  R + VE L   + D+ G K I   I G   +  +K E+GVHR+ R
Sbjct: 131 WAQMLTRMYLRWAERRGFSVETLDELEADE-GLKSITLQIRGDYAYGFLKAETGVHRLIR 189

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ R HTS ++V V P     I+V+I  ED+R+DT RA G+GGQHVN TDSAVR+
Sbjct: 190 ISPFDANARRHTSFSSVYVFPVLDDTIEVNIRPEDLRVDTYRAGGAGGQHVNKTDSAVRL 249

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRS 303
           TH+PTGI+V   +E+SQ  NR  AM +L+ARLY+  R     E +  A  K  I  G+  
Sbjct: 250 THLPTGIVVACQNERSQISNRATAMSMLKARLYEYYRNEKEKENAKFAAEKKGISWGN-- 307

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
            +IR+Y F     + DHR       ++ V+ G ID  I   L    A  +
Sbjct: 308 -QIRSYIFQPYTMVKDHRTKHETGNIQAVMDGDIDGFIEDFLKKQWANQL 356


>gi|332671313|ref|YP_004454321.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484]
 gi|332340351|gb|AEE46934.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484]
          Length = 362

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 151/358 (42%), Positives = 212/358 (59%), Gaps = 19/358 (5%)

Query: 12  LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L +  AEIE R+++           +L   YA +  +      +     +          
Sbjct: 11  LLDEHAEIEARLADPAVHADAALARRLGRRYAELGRVAQAYRAWRAASDDA-------EA 63

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
               +E+ +    E+ A++   R  E  +  +L+P+D DD +  ILEI+AG GG E+ALF
Sbjct: 64  AAELAEVDEAFAAELPALQDVARTAEARLRDVLVPRDPDDARDVILEIKAGEGGEESALF 123

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFESG 181
            GDL RMY RYA    W+ +VL S+++D GG+K++  ++          GV++ +K+E G
Sbjct: 124 AGDLLRMYTRYAERMGWQTQVLESTESDLGGFKDVHLSVKARGAVAPEDGVWAHLKYEGG 183

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTT 240
           VHRVQRVP TE+ GR+HTSAA V VLPEA +  +VDI   D+RID  R+SG GGQ VNTT
Sbjct: 184 VHRVQRVPVTESQGRIHTSAAGVLVLPEAEDEGEVDIDPNDLRIDVYRSSGPGGQSVNTT 243

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V+  +EKSQ QNR +AM+VLRARL    ++  A   S  R+ Q+ +
Sbjct: 244 DSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAASQARRSQVRT 303

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            DRSERIRTYNF + RI DHR     Y L+ VL G +  ++   + A +A  + SA E
Sbjct: 304 VDRSERIRTYNFPENRIADHRTGYKAYNLDAVLGGDLGPVVQSAIDADEAARLASAGE 361


>gi|193216649|ref|YP_001999891.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1]
 gi|226739117|sp|B3PMD5|RF1_MYCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193001972|gb|ACF07187.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1]
          Length = 355

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 148/353 (41%), Positives = 219/353 (62%), Gaps = 8/353 (2%)

Query: 9   ICDLKNRFAEIELRMSE---SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  +K ++  +   +++      +  Y K+ +E+A+I  I      Y   +        +
Sbjct: 5   LISIKEKYELLAQELTKLEIFNDIKKYTKIQKEHASIEDIAIAFINYLAAESSYNLSKEI 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +  +  D E+  LA+ ++      +++LE E+  LLLP+D +D+K+ I+EIR   GG E 
Sbjct: 65  LQ-NEKDEELIALAKEDIDEQSTLMQKLEQELKELLLPQDENDNKNVIMEIRGAAGGDEG 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +F GDLF+MY+++     +K++++ S     GGY  IV  + G  VFS++KFE GVHRV
Sbjct: 124 DIFSGDLFKMYQKFCEANDFKIKIVDSVYGTAGGYSRIVFIVKGEKVFSKLKFERGVHRV 183

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVP TE  GRVHTS ATV VLPE  +   ++I  EDI +D  R+SG+GGQ VNTTDSAV
Sbjct: 184 QRVPQTETQGRVHTSTATVTVLPEVDDDVKIEIRPEDIEVDVFRSSGAGGQSVNTTDSAV 243

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH  TGI+V +  E+SQ  NR  A+K+L+A+LY++E K+   E    RKL  G+GDRS
Sbjct: 244 RITHKKTGIIVTSQDERSQIMNRETALKILKAKLYEIEVKKREEEEQGLRKLA-GTGDRS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           E+IRTYN+ Q RITDHRI  +L  L+ V++G +D II+ L+   +A  I +A 
Sbjct: 303 EKIRTYNYPQDRITDHRIGFSLS-LKNVMEGNLDKIIDALIADEKALKIKAAG 354


>gi|238916331|ref|YP_002929848.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
 gi|238871691|gb|ACR71401.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
          Length = 372

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 168/342 (49%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + + + R  E+E  M      D   K       +  +      Y++ +    D+ T+I 
Sbjct: 26  DLDNKQKRIEELEADMEAPGFWDNPDKSQNAMKELKGLKDAFERYNELETGLDDVKTLIE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                ++       E+      + +    +    L     D    IL + AG GG+E+  
Sbjct: 86  MAEESND--QSLIPEIEEEITNLEDKMESLRIETLLSGEHDACDAILTLHAGAGGTESCD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   LFRMY R+A    +  E L   + ++ G K +   I G   +  +K E GVHR+ R
Sbjct: 144 WCQMLFRMYTRWAESHGYTTETLDYLEGEEAGIKSVTIEIRGENAYGHLKSEHGVHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS  +  V+P+   +ID++I  +D+RIDT R+SG+GGQH+N T SA+RI
Sbjct: 204 ISPFNAAGKRQTSFVSCDVMPDINQDIDIEINDDDLRIDTYRSSGAGGQHINKTSSAIRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQHQN+ +AM++L+A+LY ++    A   S  R   +   +   +
Sbjct: 264 THLPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKEAENAENLSGIR-GDVKDINFGSQ 322

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y       + D+R N  +     VL G ID  IN  LT 
Sbjct: 323 IRSYVLQPYTMVKDNRTNKEVANAGSVLDGNIDPFINAYLTW 364


>gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           903]
 gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           903]
          Length = 336

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 106/341 (31%), Positives = 184/341 (53%), Gaps = 12/341 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E +M+E    D  I   +    ++ +      + Q      +   ++     
Sbjct: 1   MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++    ++  ++K +   E      LL  +  D+ + ILEI  G+GG+EA  +   
Sbjct: 61  DDSVKEELIEKLEELDKRMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFTSVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F+    + DHR N  + +++ V+ G ID  I+  L   
Sbjct: 294 SYVFTPYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|110834510|ref|YP_693369.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|110647621|emb|CAL17097.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 356

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 98/350 (28%), Positives = 171/350 (48%), Gaps = 22/350 (6%)

Query: 11  DLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
               R  E+E  +      +       L +E + +  ++  I    Q  ++   L  ++ 
Sbjct: 13  QKSERLTEVERELESPDVWNDPPYAQALGKERSQLEGVVKTIDDASQGLEDTSALLDLVV 72

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +   +  + ++      +  +++ ++  ++ +  +     D  S  L+I++G+GG+EA  
Sbjct: 73  EEGDEDTLSEVE-----SDLRDLEKMVADLEFRRMFSGQMDPCSAYLDIQSGSGGTEAQD 127

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   + RMY R+     +K E++ +S  D  G K       G   +  ++ E+GVHR+ R
Sbjct: 128 WAEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATVRFEGDYAYGWLRTETGVHRLVR 187

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPL-EDIRIDTMRASGSGGQHVNTTDSAVRI 246
               ++ GR HTS ++V V PE  +         ++R+DT RASG+GGQHVN TDSAVR+
Sbjct: 188 KSPFDSGGRRHTSFSSVFVSPEVDDDIDIEIDLGNMRVDTYRASGAGGQHVNRTDSAVRL 247

Query: 247 TH--------IPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQ 296
           T+          T +    SE+SQHQN+ +AMK+++A++Y++E +R   E+    N K  
Sbjct: 248 TYLFKDDGGTEHTVVTQCQSERSQHQNKDKAMKMMQAKVYELEMQRRNAEKQALENSKAD 307

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 308 IGWG---SQIRSYVLDDARIKDLRTGVENRNTQAVLDGALDPFIEASLKA 354


>gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC]
 gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
           K601]
 gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC]
 gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
           K601]
          Length = 367

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 169/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +   + +    +   K   L +E   +  ++  +     +  +  +L+ + 
Sbjct: 30  DAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVLTLQKLTAELADNAELYEMS 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   ++ +  +          ++  L  E+ +  +     D  +C ++I+AG GG+EA 
Sbjct: 90  REEGDEAGLLAIEGE-----AAKLLPLIEELEFRRMFSKEADPLNCYIDIQAGAGGTEAC 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L R Y +YA  + +K  V   +  D  G K     I G   +  ++ E+GVHR+ 
Sbjct: 145 DWAGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAYGLLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++SG  HTS A++ V PE    I+++I   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSSGGRHTSFASLFVYPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI+V     +SQH NR  A + LR++LY+ E ++   E+    + K  +G G  
Sbjct: 265 LTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+ +   + VL G +D  I   L  
Sbjct: 323 -HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|315077778|gb|EFT49829.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA2]
          Length = 361

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 204/364 (56%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++ R  EIE ++++S  +       +L + +A +  ++S     DQ + 
Sbjct: 1   MSESAQQAIDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DVEAAEDLT--EEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 114 SGEGGEESALFAADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   ++R+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEVRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI+    +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNFS+ R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFSENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 353

Query: 354 SASE 357
              E
Sbjct: 354 QRPE 357


>gi|52425597|ref|YP_088734.1| peptide chain release factor 2 [Mannheimia succiniciproducens
           MBEL55E]
 gi|52307649|gb|AAU38149.1| PrfB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 325

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 15/331 (4%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    +   K   L +E +A+  +++ I   DQ  ++   L  +  +   +    +  
Sbjct: 1   MEQPDVWNEPEKAQALGKERSALETVVNTIKKLDQGLEDVDGLLELAVEGEDEETFNEAV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                    E+ +   ++ +  +     D   C ++++AG+GG+EA  +   L RMY R+
Sbjct: 61  TE-----LDELEQQLAKLEFRRMFSGEHDACDCYIDLQAGSGGTEAQDWTEMLLRMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ R    +++ R HT
Sbjct: 116 AESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHT 175

Query: 200 SAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A   + PE  +         D+RID  RASG+GGQHVN T+SAVRITHIP+GI+V   
Sbjct: 176 SFAAAFIYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +++SQH+N+ + MK L+A+LY++E ++   ++    + K  IG G    +IR+Y     R
Sbjct: 236 NDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWG---SQIRSYVLDDSR 292

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           I D R  +     + VL G +D  I   L A
Sbjct: 293 IKDLRTGVENRNTQAVLDGDLDRFIEASLKA 323


>gi|326561958|gb|EGE12292.1| peptide chain release factor 1 [Moraxella catarrhalis 103P14B1]
          Length = 319

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 154/323 (47%), Positives = 218/323 (67%), Gaps = 9/323 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  + +RF E+   +S+  ++     + +L+ E++ +S I +    + Q + 
Sbjct: 1   MKESLRHRLDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q  + ++    SD E++++A  E+      I  LE  +N ++LPKD +D  +  LEIR
Sbjct: 61  DLQTANELL----SDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY++Y   + W+VEVLS+++ + GGYKEI+A +SG GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVAV+PE    D  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTG++     E+SQH N+ +AMK+L AR+   + +   +  S  R+ 
Sbjct: 237 VNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQAQIDATSDMRRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRITD 318
            +GSGDRSERIRTYNF QGR+TD
Sbjct: 297 LVGSGDRSERIRTYNFPQGRMTD 319


>gi|15828576|ref|NP_325936.1| peptide chain release factor 1 [Mycoplasma pulmonis UAB CTIP]
 gi|20139344|sp|Q98RA5|RF1_MYCPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14089518|emb|CAC13278.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Mycoplasma pulmonis]
          Length = 359

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 151/361 (41%), Positives = 218/361 (60%), Gaps = 8/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    +  +  + +++ E+   + +   +     Y K + E  +I  I  + S Y   ++
Sbjct: 1   MEKSMYNSLKSILDKYQELNQELLKPEVLSDIKLYKKFSRELNSIKSISEEFSKYLNYEK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +    ++     D E+  LA+ E+L  E+++  L  E+  LLLPKD +D+   I+EIR
Sbjct: 61  TIESSKIILAQEK-DEELISLAKKEILECEEKMSSLVEELKILLLPKDKNDELDVIMEIR 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +F GDLF MY ++A     KV VL  +    GG+  IV TISG   +S++K
Sbjct: 120 GAAGGDEANIFAGDLFEMYSKWANNNNMKVSVLDRNYATSGGFTLIVFTISGEKAYSKLK 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQR+P TE+ GRVHTS ATV  +PE  +  +V+I   D++IDT R+SG+GGQ 
Sbjct: 180 FESGVHRVQRIPVTESKGRVHTSTATVTAMPEIDDDIEVEINPSDLKIDTFRSSGAGGQS 239

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITHIPTGI+ +    +SQ  NR  A+K+L+A+LYD E ++   +    RKL
Sbjct: 240 VNTTDSAVRITHIPTGIISSSQEGRSQISNRELALKILKAKLYDHENQKKLEKVGQYRKL 299

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             GSG RSE+IRTYN+ Q R+TDHRIN +   L+ +++G +  II+ LL   QA+ I   
Sbjct: 300 A-GSGARSEKIRTYNYPQDRVTDHRINFSSS-LKQIMEGKLQIIIDSLLAEEQAEKIKEV 357

Query: 356 S 356
            
Sbjct: 358 G 358


>gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84]
 gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7]
 gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407]
 gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84]
 gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407]
 gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7]
          Length = 364

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 185/345 (53%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E +M+E    +  +   +    ++ + +    + Q      +   ++ 
Sbjct: 25  DLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLD 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  +RD    +++ ++K +   E      LL  +  D  + ILEI  G+GG+EA  
Sbjct: 85  FLAEDESVRDELVEKLVELDKTMTAYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY+RY   + + VE L     D+ G K +  + +G   +  +K E GVHR+ R
Sbjct: 141 WGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +V V+PE    I+++I  +++++DT R+ G+GGQ+VN   + VR+
Sbjct: 201 ISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRL 260

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+  S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G   
Sbjct: 261 THIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWG--- 317

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y F+    + DHR    + +++ V+ G +D  I+  L   
Sbjct: 318 SQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|281357586|ref|ZP_06244073.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548]
 gi|281315843|gb|EFA99869.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548]
          Length = 364

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 173/343 (50%), Gaps = 8/343 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I D K   AE+E +MS     D         A +S   + +  + + + E +D    +  
Sbjct: 27  IEDRKAEMAELEQKMSAPDFWDNKESAQNTVAQLSACRNLLEPFRKLQSEVEDYSASVEL 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E     +I    + K +  +E     +       D  +    + AG GG+E+  +
Sbjct: 87  AAEDEEFLQETEISYRRLLKSLDRME----IMSFLSGKFDRSNLYFSVHAGAGGTESCDW 142

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RY   R WK EV+     ++ G K     ++G   +  MK E GVHR+ R+
Sbjct: 143 ANMLLRMYRRYFERRGWKDEVIDLQPGEEAGVKSATLHVTGEFAYGYMKGEKGVHRLVRI 202

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ R HTS  +V V PE   +I+++I    +RIDT R+SG+GGQHVNTTDSA+RIT
Sbjct: 203 SPFDSNARRHTSFVSVDVFPELDDDIEIEIDESQLRIDTYRSSGAGGQHVNTTDSAIRIT 262

Query: 248 HIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V     +SQH+NR  AMK+L+A+LY+ E ++  NE  A R  +  +G    +I
Sbjct: 263 HLPTGIVVCCQNERSQHKNRATAMKMLKAKLYEFEEEKRRNEADAIRGEKAENG-WGSQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           R+Y     + + D R  +       VL G ID+ I   L + +
Sbjct: 322 RSYVLQPYQMVKDLRTEVETSDTAGVLDGDIDEFIEAYLKSAR 364


>gi|296876160|ref|ZP_06900214.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           15912]
 gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
 gi|296432871|gb|EFH18664.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           15912]
 gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
          Length = 336

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 106/341 (31%), Positives = 184/341 (53%), Gaps = 12/341 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E +M+E    D  I   +    ++ +      + Q      +   ++     
Sbjct: 1   MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++    ++  ++K +   E      LL  +  D+ + ILEI  G+GG+EA  +   
Sbjct: 61  DDSVKEELIEKLEELDKRMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFTSVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F+    + DHR N  + +++ V+ G ID  I+  L   
Sbjct: 294 SYVFTPYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
 gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
          Length = 336

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 117/338 (34%), Positives = 179/338 (52%), Gaps = 10/338 (2%)

Query: 19  IELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           +E +M E    D   K  +    +S +  +++++ +  ++ +DL  +      + +    
Sbjct: 2   LERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAAA 61

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
           A+++        +  E  +   +L     D  + I+ + AG GG+EA  +V  L RMY R
Sbjct: 62  AEVKQGLAVVAQKVAE--MELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYTR 119

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A  R +KVEVL     D+ G K     + G   +  ++ E GVHR+ R+   +A+GR H
Sbjct: 120 WAERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRRH 179

Query: 199 TSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V VLPE  +  DV I  +D++IDT R+ G+GGQHVN TDSAVRITH+PTGI+V  
Sbjct: 180 TSFASVDVLPEVDDEVDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVVTC 239

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ  NRL AMK+L+ARL D+E ++   E +A R  Q  I  G    +IR+Y F   
Sbjct: 240 QNERSQLANRLAAMKMLKARLIDLELRKKEAELAALRGEQQEIAWG---SQIRSYVFHPY 296

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             + DHR       +  V+ G ID  I   L  +    
Sbjct: 297 SLVKDHRTGHETGNVGAVMDGEIDSFIAAYLRENARAQ 334


>gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
 gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
          Length = 373

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 165/349 (47%), Gaps = 7/349 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E   S     D   +  +  + +S +  +I      +    D + ++ 
Sbjct: 25  DLDRLRADKARLEQEASAPDLWDDQARAQQVTSQLSYVNGEIEKLGSLRSRIDDANVLLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++++   L+++E           E  +    L     D +  ++ IRAG GG +AA 
Sbjct: 85  LAEAEADSGVLSEVESEITGLAKAIQE--MEVRTLLSGEYDSREALVAIRAGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +  EV  +S  ++ G K    T+     +  +  ESG HR+ R
Sbjct: 143 FAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       +DIP  ++RID  R+SG GGQ VNTTDSAVRI
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVEQTDSIDIPENEMRIDVYRSSGPGGQSVNTTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN+  A++VL+ARL + +R+    + +  +    GS    ++
Sbjct: 263 THIPTGIVVTCQNEKSQLQNKASALRVLQARLLERKRQEEQAKMAGLKTDAAGS--WGDQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +R+Y     + + D R          V  G +D  I   +   + + + 
Sbjct: 321 MRSYVLHPYQMVKDLRTEQETGNPSAVFDGDLDSFIEAGIRWRKQQQLA 369


>gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
 gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
          Length = 368

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 168/346 (48%), Gaps = 7/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ + A++E + S     D   K     + +S + ++++ +    +  +D+  +  
Sbjct: 24  DLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFSTLNRRLEDIEVLFE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              S+ +   LA+++   ++      E       L     D +  ++ +RA  GG +AA 
Sbjct: 84  LGQSEGDEDALAEVQGELVDVSKAVGEL--EVRTLLSGEYDAREALVTLRAEAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    ++ EV  +S  ++ G K    T+     +  +  E G HR+ R
Sbjct: 142 FAEMLLRMYTRWAERHNYQYEVYDTSYAEEAGIKSATLTVKAPYAYGTLSVEQGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P       VDIP +++R+D  R+SG GGQ VNTTDSAVRI
Sbjct: 202 ISPFDNQGRRQTSFAGVEVVPVVEQSDHVDIPEDELRVDVYRSSGPGGQGVNTTDSAVRI 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+P+GI+V   +E+SQ QNR  AM VL+A+L    R+    +  A +     SG    +
Sbjct: 262 THLPSGIVVSCQNERSQIQNRASAMAVLQAKLLQRRREEEQAKMDALK--DDSSGSWGNQ 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R N        VL G ID+ I   +   + +
Sbjct: 320 MRSYVLHPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWRKQR 365


>gi|240169515|ref|ZP_04748174.1| peptide chain release factor 1 [Mycobacterium kansasii ATCC 12478]
          Length = 357

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 203/336 (60%), Gaps = 17/336 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I  L    A++E  +S+           K    +A ++PI++        +++ +    +
Sbjct: 8   IDVLLAEHADLEHALSDPELHSNPGAARKAGRRFALLAPIVATHRKLVAAREDLETAREL 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
               + DS + + A++     E  + EL+ ++  +L P+D  D    +LE+++G GG E+
Sbjct: 68  AA--SDDSFVAEAAEL-----EARVAELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-----SGRGVFSRMKFES 180
           ALF  DL RMY RYA  R W V VL  + +D GGYK+    I     S  GV+SRMKFE 
Sbjct: 121 ALFAADLARMYIRYAERRGWTVTVLDETTSDLGGYKDATLAIASKGDSVDGVWSRMKFEG 180

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V V PE  E+ +V I   D+RID  R+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNT 240

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RA++VL ARL  +  ++   + SA+R  QI 
Sbjct: 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQSMAEEQALADASADRASQIR 300

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           + DRSERIRTYNF + RITDHRI    Y L+ VL G
Sbjct: 301 TVDRSERIRTYNFPENRITDHRIGYKAYNLDQVLDG 336


>gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124]
          Length = 362

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   +  L+ + AE+EL+M E+   D   K  E       +  KI  +    +   D+
Sbjct: 20  MGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDV 79

Query: 63  HTVIG-DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             +      +D E       EV A+ KEI  L        +     D    IL +  G G
Sbjct: 80  EVLKELMEENDEETAKEIISEVKALSKEIDTL----KIETILSGEYDRNDAILTLHTGVG 135

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           GS+A  +   L RMY R+   + + +E +     D+ G K +   + G   +  +K E G
Sbjct: 136 GSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKG 195

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           +HR+ R+    A+G+  TS A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T
Sbjct: 196 IHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKT 255

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITHIPTGI+V   +E+SQ  NR  AM +L+++L +++ +R   E+  +   ++  
Sbjct: 256 ESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKD 314

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
                +IR+Y F     + DHR N+    +  V+ G ID+ I   L
Sbjct: 315 MGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360


>gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
          Length = 327

 Score =  225 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 102/328 (31%), Positives = 167/328 (50%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    D      +     + +  K   + Q  +E  +L  +      + +     ++E
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 + R         LL  +  D  + ++E+  G GG+E+  +   L RMY R+A  
Sbjct: 61  ERIHLLQERL--TTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAES 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 119 HGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFC 178

Query: 203 TVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE  +     I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +++
Sbjct: 179 SVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ +NR +AM +L+A+LY +E ++ A E ++ R  Q+  G    +IR+Y F     + DH
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIG-WGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N     ++ V+ G +D  I+  L   
Sbjct: 298 RTNYETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
 gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
          Length = 377

 Score =  225 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 183/344 (53%), Gaps = 10/344 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +   R  E++  M E    +   K  +       +   +  Y + +++ +D+  +I 
Sbjct: 26  DLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELERQYEDIGVMIE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             N +++   L       + +    LE+     LL  + D   + IL + AG GG+E+  
Sbjct: 86  MGNEENDP-SLVPEVEEMLREFKESLESMRINTLLSGEYDS-DNAILRLNAGAGGTESCD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L+RM+ R+A  + + +EVL   D ++ G K +   I+G   +  +K E GVHR+ R
Sbjct: 144 WCGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGPNAYGYLKSEKGVHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS  +  V+P+  E  DV+I  ED+RIDT R+SG+GGQH+N T SA+RI
Sbjct: 204 ISPFNAAGKRQTSFVSCDVMPDIEEDLDVEINEEDLRIDTYRSSGAGGQHINKTSSAIRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRS 303
           TH+PTGI+V   +E+SQ QN+ +AM++L+A+LY ++++  A + S  R    +IG G+  
Sbjct: 264 THLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDVTEIGWGN-- 321

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +IR+Y       + DHR N     +  VL G +D  +   L  
Sbjct: 322 -QIRSYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYLRW 364


>gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
           B316]
 gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
           B316]
          Length = 380

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 104/334 (31%), Positives = 168/334 (50%), Gaps = 4/334 (1%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
             E+   M E    D   K  ++   +  +   ++  ++   +  D+  +I   N++   
Sbjct: 34  IEELSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIERLNSQYTDIIDLIDMQNAEGVD 93

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            D    E+ +   E  E    I    L     D    IL + AG GG+EA  +   L+RM
Sbjct: 94  DDDMAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVILRLNAGAGGTEACDWASMLYRM 153

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y R+A  + +  EVL   D D+ G K +   ISG   +  +K E GVHR+ R+    A  
Sbjct: 154 YTRWAERKGFTTEVLDLLDGDEAGIKSVTFQISGTNAYGLLKSEHGVHRLVRISPFNAQA 213

Query: 196 RVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           +  TS  +  V+P+  E  D++I  +D+RIDT R+SG+GGQH+N T SAVRITHIPTG++
Sbjct: 214 KRQTSFVSCDVMPDIEEDLDIEINPDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGVV 273

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V   +E+SQ QN+ +AM++L+A+L+ ++++  A + +  R  ++       +IR+Y    
Sbjct: 274 VACQNERSQFQNKDKAMQMLKAKLFIMKQEEQAAKLAGIR-GEVMDNAWGSQIRSYVLQP 332

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + D R        + VL G +D  IN  L  
Sbjct: 333 YTMVNDTRTGFKASNADGVLDGELDPFINAYLKW 366


>gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
 gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000]
 gi|24638156|sp|Q9A752|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790910|sp|B8GWM3|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
 gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter
           crescentus NA1000]
          Length = 371

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 168/342 (49%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +  E+  R+ +    D       ++ E A ++  +  +   ++  ++  +   +    +
Sbjct: 27  RKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLKDALEYAELAEMES 86

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  + D       A  K ++E         L     D   C +EI +G GG+E+  + G
Sbjct: 87  DEDSLNDAR-----AQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGGTESCDWAG 141

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A       E++  +D D  G K     + G   +  +K E+GVHR+ R+  
Sbjct: 142 ILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGVHRLVRISP 201

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS A+  V P     I+++I   D+R DT RASG+GGQH+N TDSAVR+THI
Sbjct: 202 YDSSARRHTSFASAWVYPVVDDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHI 261

Query: 250 PTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI +   + +SQHQNR  A K+LRARLY+ E ++    +    ++K  IG G    +I
Sbjct: 262 PTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIGWG---HQI 318

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R N+     + VL G +D  +   L   
Sbjct: 319 RSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLAQR 360


>gi|299821880|ref|ZP_07053768.1| peptide chain release factor RF2 [Listeria grayi DSM 20601]
 gi|299817545|gb|EFI84781.1| peptide chain release factor RF2 [Listeria grayi DSM 20601]
          Length = 338

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 192/341 (56%), Gaps = 14/341 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--H 69
           ++ R AE+E +M +    +            + +      + Q ++++++L   +     
Sbjct: 1   MEARIAELEDQMLDPSFWNDQQGAQTVINEANGLKDTYQAFHQLEEQQENLEVSLELLRE 60

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D+++++  + E+    +E+++ E      ++  +  D  + ILEI  G GG+E+  + 
Sbjct: 61  ELDADLKEQVEEELQTFVRELKDFEL----KMILSEPYDKNNAILEIHPGAGGTESQDWG 116

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY+R+A  + +KVE+L     D+ G K +   I G   +  +K E G+HR+ R+ 
Sbjct: 117 SMLLRMYQRFADKKGFKVEMLDYQAGDEAGIKSVTLLIKGLNAYGYLKAEKGIHRLVRIS 176

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+TH
Sbjct: 177 PFDSSGRRHTSFVSVDVMPELNDDIEIEVRPEDLKIDTYRATGAGGQHINTTDSAVRMTH 236

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSER 305
           +PTGI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +A R  Q  IG G    +
Sbjct: 237 LPTGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKEQELAAIRGEQKEIGWG---SQ 293

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR+Y F     + DHR  +     + V+ G IDD IN  L 
Sbjct: 294 IRSYVFHPYSMVKDHRTEVETGNTQAVMDGEIDDFINAYLR 334


>gi|323143525|ref|ZP_08078205.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066]
 gi|322416719|gb|EFY07373.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066]
          Length = 347

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 101/352 (28%), Positives = 175/352 (49%), Gaps = 15/352 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M+          K R  E+   + +    +   K   L +E   +S ++S+         
Sbjct: 1   MLLGGIFDFETKKERLEEVNGLLEDPQVWNDPEKAQQLGKERQVLSSVVSRFDKLYSGFD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +   L  +  +   +  I++       +   ++ E+ N + +  +    +D+  C ++I+
Sbjct: 61  DVLMLFELGSEEGDEDSIKEA-----YSEADKLEEVLNALEFERMFSKPNDNSDCYMDIQ 115

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           +G+GG+EA  +   + RMY ++     +   V+  S+ +  G K      +G   F  ++
Sbjct: 116 SGSGGTEAQDWAEMVMRMYLKFGEKHGFDCTVIECSEGEVAGIKSATLKFAGPYAFGWLR 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
            E+G+HR+ R    +++ R HTS  +  V PE      V+I   D++ID  R+SG+GGQH
Sbjct: 176 TETGIHRLVRKSPFDSNNRRHTSFCSAFVYPEIDNDIKVEINPADLKIDVFRSSGAGGQH 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANR 293
           VN T+SAVRITHIPTG++V   +E+SQ QNR +AMK LRA+LY++E ++  +E+    + 
Sbjct: 236 VNKTESAVRITHIPTGVVVSCQNERSQFQNRDQAMKQLRAKLYELELRKQQSEQQAIEDS 295

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           K  IG G    +IR+Y     R+ D R  +     + VL G +D  I   L 
Sbjct: 296 KADIGWG---SQIRSYVLDDARVKDLRTQVECRDTQRVLNGDLDQFIEASLK 344


>gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
 gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
          Length = 373

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 184/351 (52%), Gaps = 6/351 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   I  + +  AE+E + SE    +      +       + +KI  ++    + +DL
Sbjct: 21  MRASLDIASISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNITSQWEDL 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            T+        E  +    EV    + ++     +    L     D  + IL + AG GG
Sbjct: 81  FTLSEL--GLEEQDESVIPEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLHAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +V  L RM+ R+   + ++V++L   D D+ G K +   + G   +  +K E GV
Sbjct: 139 TEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   ++SGR HTS A+  V+PE    I+++I  +D+R+DT RASG+GGQH+N TD
Sbjct: 199 HRLVRISPFDSSGRRHTSFASADVMPELDDTIEININPDDLRVDTYRASGAGGQHINKTD 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SA+RITHIPTG++V   +E+SQ QN+  AMK+L+A+L++++ +    +    + +Q+   
Sbjct: 259 SAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGVQME-I 317

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
               +IR+Y F     + DHR N     ++ V+ G +D  IN  L+  ++ 
Sbjct: 318 AWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLSMEKSD 368


>gi|149374726|ref|ZP_01892500.1| peptide chain release factor 2 [Marinobacter algicola DG893]
 gi|149361429|gb|EDM49879.1| peptide chain release factor 2 [Marinobacter algicola DG893]
          Length = 351

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 168/340 (49%), Gaps = 15/340 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+E  +      +       L +E + +  I+  I       ++ + L  +  +  
Sbjct: 18  ERLTEVERELEVPSVWEDPERAQALGKERSDLELIVRTIDNLTSGLEDAEGLLEIADEEE 77

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +    ++        ++  +     + +  +     D  +  L+I+AG+GG+EA  +  
Sbjct: 78  DEGTAAEIEADLAGLDKELEK-----LEFRRMFSGEMDANNAYLDIQAGSGGTEAQDWGN 132

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R +K E++   + D  G K     I G   F  ++ E+GVHR+ R   
Sbjct: 133 MLLRMYLRWAERRGFKAEIVELQEGDVAGIKSATIHIQGDYAFGWLRTETGVHRLVRKSP 192

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++  R HTS ++V V PE     +++I   D+R+D  RASG+GGQHVN T+SAVR+TH 
Sbjct: 193 FDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHN 252

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSERI 306
           PTGI+V   + +SQHQN+ +AMK L+A+L++ E +    E+  + + K  IG G    +I
Sbjct: 253 PTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADIGWG---SQI 309

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     RI D R  +     + VL G ID  I   L  
Sbjct: 310 RSYVLDDSRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|269836751|ref|YP_003318979.1| hypothetical protein Sthe_0720 [Sphaerobacter thermophilus DSM
           20745]
 gi|269786014|gb|ACZ38157.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 369

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 114/353 (32%), Positives = 183/353 (51%), Gaps = 12/353 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +    E+E R ++    +           +  + +++  + +  Q+  DL  +I 
Sbjct: 25  DLPAKQREIEELEARSADPEFWNDGAGAQRVMRRLGALRNQVETWTELHQQAADLRELID 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              +D ++RD    E   + + + +LE      LL     D+   I+ I AGTGG +A  
Sbjct: 85  LAEADDDLRDEIAAETERVLRGVEQLELN----LLLSGQYDEHDAIMAIHAGTGGVDAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A+ R ++ +VL  ++ ++ G K     I G   +   K E+G HR+ R
Sbjct: 141 WAEMLMRMYLRWASNRGFQAQVLDVTEGEEAGIKSATIEIRGPYAYGYTKGEAGTHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   + + R HT+ A V VLP+  E     I  ++IRIDT R+SG+GGQHVN TDSAVRI
Sbjct: 201 LSPFDQAHRRHTAFALVEVLPQVEEDTEIVIRDDEIRIDTYRSSGAGGQHVNKTDSAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QNR  AMK+LRARL ++  ++   E++  +   +  G    R
Sbjct: 261 THLPTGIVVTCQNERSQIQNRETAMKILRARLTELAIRKREEEQAKLKGEHVAVG-WGNR 319

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           IR+Y       +TDHR   +   ++ V +G ID  I   L     + +G+A E
Sbjct: 320 IRSYVLQPYTMVTDHRTEYSTSNVQAVFEGEIDPFIEAYLH----QQLGAADE 368


>gi|270157123|ref|ZP_06185780.1| peptide chain release factor 2 [Legionella longbeachae D-4968]
 gi|289164472|ref|YP_003454610.1| peptide chain release factor 2 [Legionella longbeachae NSW150]
 gi|269989148|gb|EEZ95402.1| peptide chain release factor 2 [Legionella longbeachae D-4968]
 gi|288857645|emb|CBJ11485.1| putative peptide chain release factor 2 [Legionella longbeachae
           NSW150]
          Length = 336

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 107/337 (31%), Positives = 170/337 (50%), Gaps = 15/337 (4%)

Query: 17  AEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   +  S   D       L  E   +  ++S ++   Q   +  +L  +  + + + 
Sbjct: 2   EEVVRELESSTIWDNPEVAQALGREQTQLEALVSTLTQLGQSITDLNELFEMAREESDEQ 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            I ++++       + + +   ++ +  +     DD +  L+I++G+GG+EA  +   L 
Sbjct: 62  TINEISEE-----LQTVEKKVADLEFRRMFSGKMDDSNAYLDIQSGSGGTEAQDWAEMLL 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+     +  E++  S  D  G K       G   F  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
             R HTS A V V PE  +         D+RIDT RASG+GGQHVN TDSAVRITH P+G
Sbjct: 177 GNRRHTSFAAVFVSPEIDDDIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSG 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
           I+V   +++SQH+N+ +AMK LRA+LY++E ++   E+ A    K  IG G    +IR+Y
Sbjct: 237 IVVQCQTDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              Q RI D R  +     + VL G +D  I   L A
Sbjct: 294 VLDQSRIKDLRTGVETSNTQAVLDGALDQFIEASLKA 330


>gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM
           7109]
 gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
           7109]
          Length = 371

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 136/358 (37%), Positives = 207/358 (57%), Gaps = 17/358 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + D+ + +  +E ++++    +      ++ + +  + P+I      +  +++ +    +
Sbjct: 21  MDDILSEYQGLEAQLADPELHNDPKAARRVGKRFQELQPVIQTYERLNTAREDHEAAAEM 80

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +    +E           +E EI EL+ ++  LL P+D  +    I+EI++G GG EA
Sbjct: 81  ASEDAEFAEEA-------TRLEAEIEELQEKLTDLLAPRDPKNGDDIIMEIKSGAGGEEA 133

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF G+L RMY+RYA    +  EVL  ++ D GG K++  +I  +       ++  KFE 
Sbjct: 134 ALFAGELARMYQRYAERHGFATEVLGLNETDLGGVKDMTMSIRSKQPSRDGAWADFKFEG 193

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+ TSAA V V PE  E  DV+I  +DIR+D  R+SG GGQ VNT
Sbjct: 194 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKDIRVDVYRSSGKGGQGVNT 253

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTG++V    E+SQ QNR RAM+VL ARL  ++ +    E +  R  QI 
Sbjct: 254 TDSAVRITHLPTGVVVTCQKERSQIQNRARAMQVLAARLQQMKEEEAEAEAAEGRAAQIR 313

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           + DRSERIRTYNF + R++DHRI      L+ VL G ++ +   L  A + + + + S
Sbjct: 314 TMDRSERIRTYNFPESRVSDHRIGYKANNLDSVLDGDLESLFAALKEAERIERLEAES 371


>gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 369

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 182/346 (52%), Gaps = 6/346 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R +E+E R  E    +   K  E    ++ +  K+  Y   ++E  D+ T+I  
Sbjct: 27  IEPTLDRISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHLQKEFDDIDTLIDL 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                E       EV       +EL N++    L     D  + IL I AG GG+EA  +
Sbjct: 87  --GQEENDGAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIHAGAGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY R+A    ++++VL   D D+ G K +   I G   +  M+ E GVHR+ R+
Sbjct: 145 TEMLYRMYTRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMRSEMGVHRLVRI 204

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +ASGR HTS A+V VLPE    I ++I  +D+RID  R+SG+GGQHVN T+SA+RIT
Sbjct: 205 SPFDASGRRHTSFASVEVLPELDNSIQININPDDLRIDRYRSSGAGGQHVNKTESAIRIT 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG++V   +E+SQ QNR  AM +L+++L+ + +    ++    +  Q+       +I
Sbjct: 265 HIPTGVVVSCQTERSQIQNRETAMNMLKSKLFALAKAAQMDKVDDLKGNQM-DIAWGSQI 323

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R+Y F     + DHR N  +  ++ V+ G +D  IN  L+  +   
Sbjct: 324 RSYVFCPYTMVKDHRTNYEVTGVDKVMDGDLDGFINAYLSQGKQDK 369


>gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367]
 gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           brevis ATCC 367]
          Length = 343

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 103/338 (30%), Positives = 166/338 (49%), Gaps = 12/338 (3%)

Query: 20  ELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
           E +M++    D         +E   +   + +      + ++      ++ +        
Sbjct: 9   EGQMAQPDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQEEPDAEMQA 68

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           +       A     +         LL     D  + +LEI  G GG+E+  +   L RMY
Sbjct: 69  EFETDFATAQAALRQ-----YRLNLLLNQKYDHNNALLEIHPGAGGTESQDWGDMLLRMY 123

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A    +KV VL     D  G   +   I+GR  +  ++ E GVHR+ R+   +++GR
Sbjct: 124 TRWAEQHDFKVTVLDYQPGDVAGLSSVTLAIAGRNAYGYLRSEKGVHRLVRISPFDSAGR 183

Query: 197 VHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A+V VLPE    +D+DI   ++++D  RASG+GGQHVN T SAVRITHIPTGI+ 
Sbjct: 184 RHTSFASVDVLPELDDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVT 243

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
            + +++SQ QNR  A+ +LRA+LY+   ++ A E++A    Q+  G    +IR+Y F   
Sbjct: 244 QSQAQRSQLQNRQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIG-WGSQIRSYVFHPY 302

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             + DHR N      + V+ G +D  I+  L    ++ 
Sbjct: 303 TMVKDHRTNYETGNGQAVMDGDLDPFIDAFLQWQLSQK 340


>gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
 gi|254790921|sp|B9DRN6|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
          Length = 366

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 186/345 (53%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E +M+E    +  I   +    ++ + S    +    +   +    + 
Sbjct: 25  DLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKSTFETFHDMLELSDETELYLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  I++  +        ++ ++ ++    LL  +  D  + ILEI  G+GG+EA  
Sbjct: 85  MLAEDESIKEELE----EALVKLEQILSQYEMTLLLSEPYDHNNAILEIHPGSGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   LFRMY R+   + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R
Sbjct: 141 WADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+
Sbjct: 201 ISPFDSAKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRL 260

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G   
Sbjct: 261 THIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWG--- 317

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y F+    + DHR N  + +++ V+ G ID  I+  L   
Sbjct: 318 SQIRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYLKWR 362


>gi|119952993|ref|YP_945202.1| peptide chain release factor 1 [Borrelia turicatae 91E135]
 gi|254790864|sp|A1QYZ0|RF1_BORT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119861764|gb|AAX17532.1| bacterial peptide chain release factor 1 [Borrelia turicatae
           91E135]
          Length = 357

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 155/336 (46%), Positives = 236/336 (70%), Gaps = 5/336 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  +++  ++++   +E ++ ++  +     Y K+ +EY  +  I  K   Y+    +  
Sbjct: 1   MFLERLSPIESKIKILEEKLQDTNLIKNQKEYAKVIKEYNYLEKIKEKKDEYENIISQID 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +   ++ +  +  E+++L + E+  +  +  E+E+ I  LLL +D +D+K+ I+EIRAGT
Sbjct: 61  ENQKILSEEEN-LEMKELIKQELTHLNLKKDEIEHTIKILLLHQDENDNKNIIIEIRAGT 119

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+KE+   I G+ VF ++K ES
Sbjct: 120 GGEEAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKEVFKKLKHES 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE++GR+ TSAATVAVLPE  E D++I  +D+RID  R+SG+GGQHVNTT
Sbjct: 180 GVHRVQRVPITESNGRLQTSAATVAVLPEVEETDIEINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTGI+V   +E+SQH+N+ +AMK+LRARLY  E  +   +RS +RK Q+GS
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYKFEDLKKQEQRSNDRKQQVGS 299

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY 335
           GDRSERIRTYNF Q R+T+HR N++LYKLE ++QG 
Sbjct: 300 GDRSERIRTYNFPQNRVTEHRANISLYKLEEIMQGE 335


>gi|260771797|ref|ZP_05880715.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
 gi|260613089|gb|EEX38290.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
          Length = 320

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 112/323 (34%), Positives = 175/323 (54%), Gaps = 12/323 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E +++  ++  I+  +Q   + + L  +  +   D E  D    E+  +
Sbjct: 3   NEPERAQALGKERSSLQAVVETINQLEQGVDDVEGLLELAIEA-QDQETFDEVLPELEEL 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           E ++ +LE    +  +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K
Sbjct: 62  EAKLAQLE----FRRMFSGDHDAAHCYIDLQAGSGGTEAQDWTSMLLRMYLRWADDKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            EV+  S+ D  G K     I G   +  ++ E+GVHR+ R    ++ GR HTS A+  V
Sbjct: 118 TEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFV 177

Query: 207 LPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE  E   VDI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+
Sbjct: 178 YPEIDENIAVDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  
Sbjct: 238 NKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLT 345
           +     + VL G +D  I   L 
Sbjct: 295 VENRNTQAVLDGDLDKFIEASLK 317


>gi|148270549|ref|YP_001245009.1| peptide chain release factor 1 [Thermotoga petrophila RKU-1]
 gi|147736093|gb|ABQ47433.1| bacterial peptide chain release factor 1 (bRF-1) [Thermotoga
           petrophila RKU-1]
          Length = 342

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 147/335 (43%), Positives = 206/335 (61%), Gaps = 16/335 (4%)

Query: 22  RMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQ 80
            ++      +       EYA I  I +  +   + ++  + L                  
Sbjct: 11  LLARPDLTPEQMKNYGMEYAKIEEIENITNRIKETQEFIELLRE--------------EG 56

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
              L IEK  +EL+     LLL   ++     I+EIR G GG EAALF  DLFRMY RYA
Sbjct: 57  ENELEIEKYEKELDQLYQELLLLLSSEVGDKAIVEIRPGAGGEEAALFARDLFRMYTRYA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + W +EV    + D GG +E+V  + G+  +  +K+ESGVHRVQRVP TE+ GR+HTS
Sbjct: 117 ERKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTS 176

Query: 201 AATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            ATVAVLPE  E D++I  ED++I+T RASG GGQ+VN T+SAVRITH+PTGI+V   +E
Sbjct: 177 TATVAVLPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQ+QN+  A+++LRARLY +++++   E S  RK QIG+G+RSE+IRTYNF Q R+TDH
Sbjct: 237 RSQYQNKQTALRILRARLYQLQKEQKEREISQKRKSQIGTGERSEKIRTYNFPQNRVTDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RIN T Y+L+ +L G +D+II+ L+       +  
Sbjct: 297 RINYTSYRLQEILDGDLDEIISKLIEHDIENNLEE 331


>gi|260771153|ref|ZP_05880080.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972]
 gi|260613750|gb|EEX38942.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972]
 gi|315179241|gb|ADT86155.1| peptide chain release factor 2 [Vibrio furnissii NCTC 11218]
          Length = 320

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 169/323 (52%), Gaps = 12/323 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E +++  ++  I   DQ   + + L  +  +        ++        
Sbjct: 3   NEPERAQALGKERSSLEAVVETIDQLDQGVDDVEGLLELAVEAEDQETFDEIGPE----- 57

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
            +E+     ++ +  +     D   C L+++AG+GG+EA  +   + RMY R+A  + +K
Sbjct: 58  LEELESKLAKLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMMLRMYLRWADAKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            EV+  S+ D  G K     I G   +  ++ E+GVHR+ R    ++ GR HTS A+  V
Sbjct: 118 TEVIEVSEGDVAGLKSATVRIVGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFV 177

Query: 207 LPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE  +   +DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+
Sbjct: 178 YPEIDDNIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  
Sbjct: 238 NKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLT 345
           +     + VL G +D  I   L 
Sbjct: 295 VENRNTQAVLDGDLDKFIEASLK 317


>gi|70728519|ref|YP_258268.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           fluorescens Pf-5]
 gi|68342818|gb|AAY90424.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens
           Pf-5]
          Length = 364

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 172/343 (50%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +    +      +L  E AA++ I+  +   +    + +DL  + 
Sbjct: 27  DQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVETLDELNGGLADCRDLLDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  + D+      A    + E   ++ +  +     D  +  L+I+AG+GG+EA 
Sbjct: 87  VEEEDEGAVGDVV-----AELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +   ++  S  +  G K     I G   F  ++ E GVHR+ 
Sbjct: 142 DWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS + V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 202 RKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH N+  AMK+LRA+LY+ E ++     +   + K  IG G  
Sbjct: 262 ITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R N+     + VL G ID+ +   L 
Sbjct: 320 -HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 361


>gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
 gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
          Length = 337

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 169/342 (49%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K R  E+   + +    +       + +E   +  +++ +    ++ ++ + +  +  +
Sbjct: 2   KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVLNVLDNLAEQLEDAKAMLDLAVE 61

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + +S + D+      +      +   ++ +  +  +  D   C +EI+AG+GG+EA  +
Sbjct: 62  ADDESLLVDVE-----SELATAEDELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDW 116

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+     +K E++  SD D  G K     + G   +  ++ ESGVHR+ R 
Sbjct: 117 ASMLLRMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRK 176

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++  R HTS + V V PE  +  +++I   D+R DT RASG+GGQH+N TDSAVR+T
Sbjct: 177 SPFDSGNRRHTSFSAVFVSPEIDDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLT 236

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSE 304
           H PTGI+V   +++SQH NR  A K LRA+LY++E  +         + K  IG G    
Sbjct: 237 HAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWG---S 293

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R  +       VL G +D  I   L  
Sbjct: 294 QIRSYVLDDSRIKDLRTGVENSNTGAVLDGDLDKFIEASLKQ 335


>gi|308071079|ref|YP_003872684.1| peptide chain release factor 2 [Paenibacillus polymyxa E681]
 gi|305860358|gb|ADM72146.1| Peptide chain release factor 2 (RF-2) [Paenibacillus polymyxa E681]
          Length = 331

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 111/328 (33%), Positives = 172/328 (52%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     D   K     A ++ + S +  Y+Q + E +D   +      D E  +    E
Sbjct: 1   MAAPDFWDDNDKAQAVIAEMNAVKSSVDSYEQLRLEYEDAGMMAELA--DEEGDETLAGE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +    + +     E    LL     D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 59  IENSIRSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE   ++DV+I  ED++IDT RASG+GGQH+NTTDSAVRITH+P+GI+V   +E+
Sbjct: 179 SCDVVPEIADDVDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVVTCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ +NR +AM +LR++LY+ + +    +    R  Q        +IR+Y F     + DH
Sbjct: 239 SQIKNREQAMTMLRSKLYERKIEEQRQQLDEIRGEQ-SDIAWGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R ++    +  V+ G +D  I+  L + 
Sbjct: 298 RTSVETGNVGAVMDGDLDPFIDGYLRSQ 325


>gi|148988472|ref|ZP_01819919.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73]
 gi|147926153|gb|EDK77227.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73]
          Length = 294

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 144/293 (49%), Positives = 206/293 (70%), Gaps = 1/293 (0%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I +   D+++ ++A+ E+   + E  E E ++  LLLPKD +DDK+ ILEIR   GG E
Sbjct: 1   MIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 60

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDL  MY++YA  + W+ EV+ +S N  GG+KE+VA +SG+ V+S++K+ESG HR
Sbjct: 61  AALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 120

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE+ GRVHTS ATV V+PE  E++ DI  +D+R+D   ASG+GGQ+VN   +AV
Sbjct: 121 VQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 180

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RI H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  IG+GDRS
Sbjct: 181 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 240

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ERIRTYNF Q R+TDHRI LTL KL+ +L G +D++++ L+   Q + +   +
Sbjct: 241 ERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEELN 293


>gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
 gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
          Length = 327

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 111/331 (33%), Positives = 171/331 (51%), Gaps = 16/331 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M++    +   K        + +   ++ Y +  +  ++L     ++ +   +    +L 
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLSESHEELQMTHDLLKEEPDEELQLELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      ++            LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  KELKTLTKEFNE-----FELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  E  D+DI  EDI++DT RASG+GGQHVNTTDSAVRITH+PT ++V   
Sbjct: 176 SFVSCDVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ +NR RAMK+L+++LY    +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 TERSQIKNRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 293 LVKDHRTNTEMGNVQAVMDGDIDVFIDAYLR 323


>gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
 gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
          Length = 378

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 173/347 (49%), Gaps = 15/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   +E E    ES   +   K  +    I  + ++I  +        D   +  
Sbjct: 24  DVPSIEAAISEKEALSGESGFWENPAKAEKVMTDIKQLKNRIEPWRDLIAAVDDAEALYE 83

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G  + D  +    +      + E   L      L L     D     L I AG GG+EA
Sbjct: 84  LGMESGDESLEAELKAAYDQAQAEYDRLSI----LNLLSGEVDRNGAFLTIHAGAGGTEA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +   + + GG K +   ISG   +  +K E+G+HR+
Sbjct: 140 CDWAQMLCRMYVRWAERRGFKVETVDMLEAE-GGIKSVTLQISGEYAYGYLKSEAGIHRL 198

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ R HTS ++V V P     I+VDI  ED+R+DT RA G+GGQHVN TDSAV
Sbjct: 199 VRISPFDSNARRHTSFSSVYVFPVLDDTIEVDIRPEDLRVDTYRAGGAGGQHVNKTDSAV 258

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           R TH+PTGI+V   +E+SQ  NR  AM +LRARLY+  R++   E +  A+ K  I  G+
Sbjct: 259 RFTHLPTGIVVACQTERSQTMNRATAMSMLRARLYEYYREQKEKENAKFASEKKDISWGN 318

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR    +  ++ V+ G ID  I   L A 
Sbjct: 319 ---QIRSYVFQPYTMVKDHRTKHEIGNIQSVMDGAIDPFIEAFLAAQ 362


>gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus 03BB102]
 gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus 03BB102]
          Length = 380

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 175/347 (50%), Gaps = 16/347 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           +   + + AE+E +M  +   D              +  ++ K    D+  +  +  H +
Sbjct: 41  LPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHEL 100

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +    +L       I++            LL  D  D  + ILE+  G GG+E+
Sbjct: 101 LKEEYDEELHEELESEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTES 155

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE +     D+ G K +   I G   +  +K E GVHR+
Sbjct: 156 QDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 215

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 216 VRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAV 275

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PT  +V   SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G 
Sbjct: 276 RITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG- 334

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y F     + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 335 --SQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift
           [Carnobacterium sp. AT7]
 gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift
           [Carnobacterium sp. AT7]
          Length = 353

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 117/353 (33%), Positives = 187/353 (52%), Gaps = 16/353 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           MV      + +L+   AE   RM+E    +   K        + +  K + Y+    E++
Sbjct: 1   MVLGGLFDLENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKE 60

Query: 61  DLHT---VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           DL     ++ + N +   ++L       ++K  +         LL  D  D  + I+E+ 
Sbjct: 61  DLELLLEMVKEENDEELAKELNSKISPFLDKLDQ-----YELDLLLSDPYDKNNAIIELH 115

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
            G GG+E+  +   L RMY R+A  R +K+E L+    D+ G K +   I G   +  +K
Sbjct: 116 PGAGGTESQDWGSLLLRMYTRWAEKRGFKIETLNYQSGDEAGIKSVTLLIKGMNAYGYLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
            E GVHR+ R+   +++GR HTS  ++ V+PE    +D+ I  +D++IDT RA+G+GGQH
Sbjct: 176 AEKGVHRLVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKIDTYRATGAGGQH 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +NTTDSAVRITHIP+G++V + +++SQ +NR +AM +L+A+LY +E +    E +A R  
Sbjct: 236 INTTDSAVRITHIPSGVVVASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAIRGE 295

Query: 296 Q--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           Q  IG G    +IR+Y F     + DHR N     +  V+ G ID  I   L 
Sbjct: 296 QLEIGWG---SQIRSYVFHPYSMVKDHRTNYETGNIAQVMDGGIDPFIQAYLR 345


>gi|118602328|ref|YP_903543.1| peptide chain release factor 2 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567267|gb|ABL02072.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 364

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 113/353 (32%), Positives = 182/353 (51%), Gaps = 15/353 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           +V L+H  +   + R  E+ L M         D    L +E + ++ I       +   +
Sbjct: 18  IVLLTHISLEKKQARLEEVLLEMENPNIWTNPDQAQVLGQEKSKLTSICQTFKQVNSVLE 77

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q+L  +    N D +  +    ++  I+  I +LE    +  +     D  S  L+I+
Sbjct: 78  DAQELLNMAQTEN-DEDTANDIIDDLDTIQSSIEKLE----FERMFSGDLDVNSAYLDIQ 132

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           +G+GG+EA  +   + RMY R+     +KV+++ +S  +  G K       G+  F  ++
Sbjct: 133 SGSGGTEAQDWAEMVLRMYLRWGEKHNFKVKLMETSAGEVTGIKSATIHFDGKYAFGWLR 192

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
            E G+HR+ R     A+G+ HTS  +V V PE   +ID+DI   D+R+DT RASG+GGQH
Sbjct: 193 TEIGIHRLVRKSPFNANGKRHTSFCSVFVSPEVDNDIDIDINPLDLRVDTYRASGAGGQH 252

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANR 293
           VN T+SAVRITH+PT I+V     +SQ  N+ +AMK L+++LY++E ++   E+    ++
Sbjct: 253 VNKTESAVRITHLPTNIIVQCQDGRSQRANKDQAMKQLKSKLYELEIQKRNAEKQSLEDK 312

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           K  IG G    +IR+Y   Q RI D R  +       VL G +D  I   L A
Sbjct: 313 KSNIGWG---HQIRSYVLDQSRIKDLRTGVESTNTNDVLDGNLDQFIEASLKA 362


>gi|226356572|ref|YP_002786312.1| peptide chain release factor 1 [Deinococcus deserti VCD115]
 gi|259585218|sp|C1CWJ1|RF1_DEIDV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226318562|gb|ACO46558.1| putative Peptide chain release factor 1 (RF-1) [Deinococcus deserti
           VCD115]
          Length = 366

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 140/358 (39%), Positives = 216/358 (60%), Gaps = 13/358 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ +L   F  +E  + +  ++       +LT  +  + P+++ +   +  + + +    
Sbjct: 4   RLSELAAEFGMVERALGDPAALADPQAYTRLTRRHRELLPLVTLLREREALESDLRGAQE 63

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++    SD ++R+LAQ E+      + +L  E+  LLLP D DD K+ ILE+RAG GG+E
Sbjct: 64  LL----SDPDMRELAQNEITEATARLEQLGAELEVLLLPTDPDDLKNVILELRAGAGGAE 119

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LFV DL RMY RYA  R  ++ VL +S++D GG  ++VA ISG   F   K+E GVHR
Sbjct: 120 AGLFVMDLLRMYTRYAEDRGLRLNVLEASESDLGGASKVVAEISGEFAFRAFKWERGVHR 179

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTS  TVAVLPEA + +V + L ++RID  R+ G+GGQ VNTTDSAV
Sbjct: 180 VQRVPATESQGRIHTSTVTVAVLPEAEQGEVQLDLSEVRIDVFRSQGAGGQGVNTTDSAV 239

Query: 245 RITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           R  +        ++V    +SQ +NR +A+ VL +RL + ER     + + +R  Q+GSG
Sbjct: 240 RAVYRAGTPDEIMVVCQDGRSQIKNREKALVVLASRLAERERAARDAQEARDRAAQVGSG 299

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYK--LEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +RSE+IRTYN+ Q R+TDHR+        L+ V+ G +  +++ L    + + + +AS
Sbjct: 300 ERSEKIRTYNYPQNRVTDHRLEGDSKNHPLDSVMAGGLGPVVSALARDERERQLLAAS 357


>gi|281185482|sp|Q0TNE1|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium
           perfringens ATCC 13124]
          Length = 362

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 173/340 (50%), Gaps = 9/340 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG- 67
           +  L+ + AE+EL+M E+   D   K  E       +  KI  +    +   D+  +   
Sbjct: 26  LASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              +D E       EV A+ KEI  L        +     D    IL +  G GGS+A  
Sbjct: 86  MEENDEETAKEIISEVKALSKEIDTL----KIETILSGEYDRNDAILTLHTGVGGSDAND 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + + +E +     D+ G K +   + G   +  +K E G+HR+ R
Sbjct: 142 WTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T+SAVRI
Sbjct: 202 ISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRI 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQ  NR  AM +L+++L +++ +R   E+  +   ++       +
Sbjct: 262 THIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKDMGWGSQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           IR+Y F     + DHR N+    +  V+ G ID+ I   L
Sbjct: 321 IRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360


>gi|78223569|ref|YP_385316.1| peptide chain release factor 2 [Geobacter metallireducens GS-15]
 gi|78194824|gb|ABB32591.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
           metallireducens GS-15]
          Length = 364

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 169/346 (48%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   +    E+E  ++     D   K      E   I  I+       ++  + + L  
Sbjct: 16  DIDSKREDIQEMEAHIAAPGFWDDNEKAQQLLRERTRIEKILELWDRLTRQADDIRVLIE 75

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   +  + ++  +       ++ +      +  +   T D  +C   I AG GG+E
Sbjct: 76  LGEEAGDEGTLDEVRAL-----NDQLEKDVEGAEFQRMLSGTHDKNACYFSINAGAGGTE 130

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY RY   + WK E+      D+ G K    T+ G   +  +K E+G+HR
Sbjct: 131 AQDWAEMLLRMYLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGEYAYGYLKAEAGIHR 190

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS A+V   PE   +I+V I   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 191 LVRISPFDSNARRHTSFASVFAFPEIEDDIEVTINEADLRIDTYRSSGAGGQHVNTTDSA 250

Query: 244 VRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSG 300
           VRITHIPTG++  +  E+SQH N+  AMK+LRA+LY+ E +    + +     K +IG G
Sbjct: 251 VRITHIPTGLVAASQCERSQHMNKATAMKMLRAKLYEKELQEREAKAAEIGGEKKEIGWG 310

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y       + D R  +     + VL G +++ I   L 
Sbjct: 311 ---SQIRSYVLHPYKMVKDLRTGVETGNPDAVLDGDLEEFIVAFLM 353


>gi|28377601|ref|NP_784493.1| peptide chain release factor 2 [Lactobacillus plantarum WCFS1]
 gi|38258340|sp|Q88YL5|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|28270434|emb|CAD63336.1| peptide chain release factor 2, C-terminal fragment [Lactobacillus
           plantarum WCFS1]
          Length = 357

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 178/354 (50%), Gaps = 16/354 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL--- 62
              +  L     E E RM+E    D      +     + +  K   + Q   E  DL   
Sbjct: 9   RFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGDLAVA 68

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           + ++ +        +                  +    LL     D  + ILEI  G GG
Sbjct: 69  YELLSEEPDAEMQAEFETDFQH-----AEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +E+  +   L RMY R+AA   +KVE +     D+ G K +   ISG   +  ++ E GV
Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A+V V+PE    +DVDI  ED++ID  RASG+GGQHVN T 
Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRITH+PTGI+V + +++SQ QNR  A+ +LRA+LY+ E ++ A ER+A +  Q  IG
Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            G    +IR+Y F     + DHR N   +  + V+ G +D  ++  L    A+ 
Sbjct: 304 WG---SQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWKLAQR 354


>gi|86136665|ref|ZP_01055244.1| peptide chain release factor 2 [Roseobacter sp. MED193]
 gi|85827539|gb|EAQ47735.1| peptide chain release factor 2 [Roseobacter sp. MED193]
          Length = 374

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 171/339 (50%), Gaps = 5/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  I  Y   KQ+  D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDDAEAAQKLMRERQNLVDAIDTYKGIKQDLADNIELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +   E      ++   E E+  LL  +   +     LEI +G GG+E+  +   L R
Sbjct: 91  QEVITDAEEALKALKVSAAEKELEALLDGEADSN--DTFLEINSGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++D+   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFCSVWVYPVVDDNIEIDVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHHPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R     +   + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHENK-GDAGWGSQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R +      + VL G +D  +   L  + A  
Sbjct: 328 YQMVKDLRTSHETSDTKGVLDGDLDGFMAATLALNVAGK 366


>gi|134095412|ref|YP_001100487.1| peptide chain release factor 2 [Herminiimonas arsenicoxydans]
 gi|133739315|emb|CAL62364.1| Peptide chain release factor 2 (RF-2) [Herminiimonas
           arsenicoxydans]
          Length = 325

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 102/331 (30%), Positives = 172/331 (51%), Gaps = 15/331 (4%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    D   +   L +E  ++  I+  +   D + ++  DL  +  + N +  I  + 
Sbjct: 1   MEDPKVWDDPKRAQDLGKEKKSLEAIVHTLIKVDAELKDAHDLFEMAREENDEDTIVAIE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 ++         + +  +     D  +C ++I+AG GG+EA  +   L R Y RY
Sbjct: 61  ADTQELLKTV-----EGMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQYLRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVE+L  SD +  G K     + G   +  ++ E+GVHR+ R    +++   HT
Sbjct: 116 CERKGFKVEILEQSDGEVAGIKTATLKVEGEYAYGLLRTETGVHRLVRKSPFDSANGRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S +++ V PE  +  ++DI   D+RIDT RASG+GGQH+N TDSAVR+TH P+GI+V   
Sbjct: 176 SFSSLFVYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +++SQH+N+  A  +L+A+L+++E +   +E+    + K  +G G    +IR+Y   Q R
Sbjct: 236 NDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWG---HQIRSYVLDQSR 292

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           I D R N      + VL G +DD I   L  
Sbjct: 293 IKDLRTNFETGNTKAVLDGDLDDFIAASLKQ 323


>gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9719]
 gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9635]
 gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9719]
 gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9635]
          Length = 352

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 173/348 (49%), Gaps = 17/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHT 64
            + + +    E E  M+E    D   K  +      A+  I++       +  +      
Sbjct: 8   DLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWD 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    DL Q  +    K            LL     D  + ILE+  G GG+E
Sbjct: 68  LLQEEFDEEMKEDLEQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   LFRMY+RY   + +KVE +     D+ G K +   I G   +  +K E GVHR
Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           + R+   ++SGR HTS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+S
Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGS 299
           A+RITH P+GI+V   +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG 
Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGW 302

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           G    +IR+Y F     + DHR N    K++ V+ G I   I   L  
Sbjct: 303 G---SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 347


>gi|330863233|emb|CBX73359.1| peptide chain release factor 1 [Yersinia enterocolitica W22703]
          Length = 330

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 151/321 (47%), Positives = 216/321 (67%), Gaps = 9/321 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIEAAEMML----DDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKE++A +SG GVF ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQAEASERRN 296

Query: 296 QIGSGDRSERIRTYNFSQGRI 316
            +GSGDRS+R RTYNF QGR+
Sbjct: 297 LLGSGDRSDRNRTYNFPQGRV 317


>gi|315634626|ref|ZP_07889910.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC
           33393]
 gi|315476574|gb|EFU67322.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC
           33393]
          Length = 325

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 100/331 (30%), Positives = 170/331 (51%), Gaps = 15/331 (4%)

Query: 23  MSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    +       L +E  ++  +++ I   +Q  ++   L  +  +   +    +  
Sbjct: 1   MEQPDVWNDADKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                A   E+ +   ++ +  +     D   C ++++AG+GG+EA  +   L RMY R+
Sbjct: 61  -----AELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+ R    +++ R HT
Sbjct: 116 AESKGFKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHT 175

Query: 200 SAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S +   V PE  +         D+RID  RASG+GGQHVN T+SAVRITH+P+GI+V   
Sbjct: 176 SFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G    +IR+Y     R
Sbjct: 236 NDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWG---SQIRSYVLDDSR 292

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           I D R  +     + VL G +D  I   L A
Sbjct: 293 IKDLRTGVENRNTQAVLDGDLDRFIEASLKA 323


>gi|284931146|gb|ADC31084.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str. F]
          Length = 360

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 145/349 (41%), Positives = 220/349 (63%), Gaps = 4/349 (1%)

Query: 7   KQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + +  ++    ++   +   +        + +E      ++    +YD+      +   +
Sbjct: 9   ETLVAIRATAQKLNKELESLTNDFKRIHAINKELKQKKQLLEVFELYDKLVVSGLEAEKI 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I D N+  E  +LA +++ A +++I +LE ++  LLLP D +DDK  I+E+R   GG E+
Sbjct: 69  IND-NTMKEFHELAILDLDAAKEQIPDLEEKLKVLLLPADPNDDKEVIVEMRPAAGGDES 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ++FVG++F +Y+ Y +   WK+ V+        GY  I   I+G  V+S+MKFESGVHRV
Sbjct: 128 SIFVGNMFDLYKEYCSKHNWKINVIEMLPTSV-GYSFISFEINGEDVYSKMKFESGVHRV 186

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVPATEA GRVHTS  T+AVLP+  +++++I   D+RIDT RASG+GGQHVN T+SAVR
Sbjct: 187 QRVPATEAKGRVHTSTITIAVLPQQDDVEIEINPADLRIDTYRASGAGGQHVNRTESAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+      KSQ  NR  AMK+LR++L++   K   +  SA RK Q+GSGDR+E
Sbjct: 247 ITHIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAAEKEKNDALSALRKNQVGSGDRAE 306

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +IRTYN+ Q R+TDHRIN++L  L+  + G ID++I+ L +  Q + + 
Sbjct: 307 KIRTYNYPQNRVTDHRINMSLNSLDRFMMGEIDEMIDALRSKEQEEKMK 355


>gi|116051698|ref|YP_789463.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115586919|gb|ABJ12934.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 332

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 104/336 (30%), Positives = 170/336 (50%), Gaps = 15/336 (4%)

Query: 18  EIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           E+   + +    +       L  E A ++ ++  +        + +DL  +  + + +  
Sbjct: 3   EVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGA 62

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
           + D+A       E   +     + +  +     D  +  L+I+AG+GG+EA  +   L R
Sbjct: 63  VDDVANEVERLREILEK-----LEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLR 117

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A    +   ++  S+ +  G K     I G   F  ++ E GVHR+ R    ++ 
Sbjct: 118 MYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSG 177

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS   V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  
Sbjct: 178 NRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNT 237

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYN 310
           +V   +E+SQH N+  AMK+LRA+LY++E ++   A++   + K  IG G    +IR+Y 
Sbjct: 238 VVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWG---HQIRSYV 294

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             Q RI D R  +     + VL G +D+ +   L  
Sbjct: 295 LDQSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 330


>gi|294788774|ref|ZP_06754015.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
 gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
          Length = 367

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 176/342 (51%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K R  E+     +    +      ++ +E   +  I+  +   +    + ++L  ++ +
Sbjct: 32  KKERLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTMDNLENGIADNRELIDMVVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N            ++A   ++      + +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  END-----TDGFAAIIADVADLETQMAALEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+++L   D +  G       + G+  +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKLDILEEDDGEIAGINRATIRVEGKYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ + HTS A+V V PE  +  ++DI   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDANNKRHTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++LR++L+++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLRSKLFELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 327

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 112/328 (34%), Positives = 167/328 (50%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    +   K        + I   ++ Y +     ++L         + +     ++E
Sbjct: 1   MADPEFWNDQQKAQTVINEANGIKDYVNSYKKLNDSHEELQMTHDLLKEEPDSDLQLELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                      E E+  L    +  D  + ILE+  G GG+E+  +   L RMY R+   
Sbjct: 61  KELKSLTKEFNEFELQLL--LSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  +  D+DI  EDI++DT RASG+GGQHVNTTDSAVRITH+PT ++V   +E+
Sbjct: 179 SCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR RAMK+L+A+LY    +    E    R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 296 DHRTNTEMGNVQAVMDGDIDTFIDAYLR 323


>gi|221124304|ref|XP_002161242.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 281

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 144/277 (51%), Positives = 191/277 (68%), Gaps = 10/277 (3%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + +LE E+  +LLPKD DD +   +EIRAGTGG E+ALF  DL RMY RY   +  + E+
Sbjct: 1   MAQLEAELQRMLLPKDPDDARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEI 60

Query: 150 LSSSDNDDGGYKEIVATISGRG--------VFSRMKFESGVHRVQRVPATEASGRVHTSA 201
           +S+S+++ GGYKE+V  I G           +  +KFESG HRVQRVPATE  GR+HTSA
Sbjct: 61  MSASESELGGYKEVVLRIEGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSA 120

Query: 202 ATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            T+AVL E  E +   I   D+RIDT RASG+GGQH+N TDSAVRITHIPTGI+      
Sbjct: 121 CTIAVLAEQDEAEAIKINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDG 180

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQH N+ +A+KVL AR+++ +R   A + +A RK  +GSGDRS+RIRTYN+ QGR+TDH
Sbjct: 181 RSQHSNKAQALKVLTARIHEKDRSERAAKDAAERKSLVGSGDRSDRIRTYNYPQGRLTDH 240

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           RINLTLYKL+  ++G +DD+I  L     A+ + +  
Sbjct: 241 RINLTLYKLDRAMEGDLDDVIEALQAYEAAQQLAALE 277


>gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 330

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 111/330 (33%), Positives = 172/330 (52%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +   K   L +    +  ++ + +    K ++   L  +  +   +S   ++ 
Sbjct: 1   MADPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELGLEEGDESITDEVD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +K        +    L     D  + IL I AG+GG+EA  +   L RMY R+
Sbjct: 61  KEYKELKKKLED-----LKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + ++VE L     ++ G K +   I G   +  +K E+GVHR+ R+   +A+GR HT
Sbjct: 116 ANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V VLPE   +I+V+I  ED++IDT RASG+GGQ+VN T+SAVRITH+PTGI+V   
Sbjct: 176 SFALVEVLPELKNDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           SE+SQ QNR  AMK+L+A+L D+  K    +     K +        +IR+Y F     +
Sbjct: 236 SERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEHREAAWGNQIRSYVFQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N  +  ++ V+ G ID  IN  L  
Sbjct: 295 KDHRTNYEVGNVQAVMDGEIDGFINAYLKQ 324


>gi|294660260|ref|NP_852919.2| peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(low)]
 gi|46576715|sp|Q7NBX3|RF1_MYCGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|284811917|gb|AAP56487.2| Peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930381|gb|ADC30320.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(high)]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 145/349 (41%), Positives = 220/349 (63%), Gaps = 4/349 (1%)

Query: 7   KQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + +  ++    ++   +   +        + +E      ++    +YD+      +   +
Sbjct: 9   ETLVAIRATAQKLNKELESLTNDFKRIHAINKELKQKKQLLEVFELYDKLVVSGLEAEKI 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I D N+  E  +LA +++ A +++I +LE ++  LLLP D +DDK  I+E+R   GG E+
Sbjct: 69  IND-NAMKEFHELAILDLDAAKEQIPDLEEKLKVLLLPADPNDDKEVIVEMRPAAGGDES 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ++FVG++F +Y+ Y +   WK+ V+        GY  I   I+G  V+S+MKFESGVHRV
Sbjct: 128 SIFVGNMFDLYKEYCSKHNWKINVIEMLPTSV-GYSFISFEINGEDVYSKMKFESGVHRV 186

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVPATEA GRVHTS  T+AVLP+  +++++I   D+RIDT RASG+GGQHVN T+SAVR
Sbjct: 187 QRVPATEAKGRVHTSTITIAVLPQQDDVEIEINPADLRIDTYRASGAGGQHVNRTESAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+      KSQ  NR  AMK+LR++L++   K   +  SA RK Q+GSGDR+E
Sbjct: 247 ITHIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAAEKEKNDALSALRKNQVGSGDRAE 306

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +IRTYN+ Q R+TDHRIN++L  L+  + G ID++I+ L +  Q + + 
Sbjct: 307 KIRTYNYPQNRVTDHRINMSLNSLDRFMMGEIDEMIDALRSKEQEEKMK 355


>gi|269469023|gb|EEZ80587.1| protein chain release factor B [uncultured SUP05 cluster bacterium]
          Length = 364

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 179/352 (50%), Gaps = 15/352 (4%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQE 58
              +H  + + + R  E+ L M         D    L +E + +  I    +  +   ++
Sbjct: 19  ALSAHLDLEEKQGRLEEVLLEMENPDIWSNPDEAQALGQEKSKLELICQTFARANSILED 78

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++L  +    N D +  +    ++  +E  I +LE    +  +     D  S  L+I++
Sbjct: 79  AKELLEMAQSEN-DKDTVNSVIGDLNTVELSIEKLE----FERMFSGELDANSAYLDIQS 133

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G+GG+EA  +   + RMY R+    K+KV+++  S  +  G K      +G   F  ++ 
Sbjct: 134 GSGGTEAQDWAEMILRMYLRWGEKHKFKVKLMEVSAGEVAGIKSATIHFNGEYAFGWLRS 193

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHV 237
           E G+HR+ R     A+G+ HTS ++V V PE  +  +++I   D+RIDT RASG+GGQHV
Sbjct: 194 EIGIHRLVRKSPFNANGKRHTSFSSVFVSPEIDDNIEININPSDLRIDTYRASGAGGQHV 253

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRK 294
           N T+SAVRITH+PT  +V     +SQH N+ +AMK L+++LY++E +    E+    + K
Sbjct: 254 NKTESAVRITHLPTNTVVQCQDGRSQHANKDQAMKQLKSKLYELEMQERNKEKQDLEDTK 313

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             IG G    +IR+Y   Q RI D R  +     + VL G +D  I   L A
Sbjct: 314 SDIGWG---HQIRSYVLDQSRIKDLRTGVESTNTQDVLDGNLDKFIEASLKA 362


>gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WW2703/97]
          Length = 352

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 172/348 (49%), Gaps = 17/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHT 64
            + + +    E E  M+E    D   K  +      A+  I++       +  +      
Sbjct: 8   DLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWD 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +        DL Q  +    K            LL     D  + ILE+  G GG+E
Sbjct: 68  LLQEEFDGEMKEDLEQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTE 122

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   LFRMY+RY   + +KVE +     D+ G K +   I G   +  +K E GVHR
Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           + R+   ++SGR HTS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+S
Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGS 299
           A+RITH P+GI+V   +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG 
Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGW 302

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           G    +IR+Y F     + DHR N    K++ V+ G I   I   L  
Sbjct: 303 G---SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 347


>gi|295401151|ref|ZP_06811124.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976744|gb|EFG52349.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 327

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 108/331 (32%), Positives = 172/331 (51%), Gaps = 16/331 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+     D              +  ++ +    +++ +  +  + +I +   +   ++L 
Sbjct: 1   MAAPDFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYELIKEEPDEDLQQELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  +             LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  TEAKRLTKDFSE-----FELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     ++ G K +   I G   +  +K E GVHR+ R+   +ASGR HT
Sbjct: 116 AEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  +++I  E+IRIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V   
Sbjct: 176 SFVSCEVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +A+ +L+A+LY  + +    E +  R  Q  IG G+   +IR+Y F    
Sbjct: 236 SERSQIKNREKALNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGN---QIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + DHR N+ +  ++ V+ G ID  I+  L 
Sbjct: 293 LVKDHRTNVEVGNVQAVMDGEIDIFIDAYLR 323


>gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus
           GD/7]
          Length = 336

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 103/332 (31%), Positives = 170/332 (51%), Gaps = 10/332 (3%)

Query: 22  RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLA 79
            M E    D   K       +  +   +  Y + +   +D+ T++      +D+ +    
Sbjct: 1   MMEEPGFWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYEENDASLIPEV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q  +   EK    L        L  +  D  + I+ + AG GG+EA  +V  LFRMY R+
Sbjct: 61  QEAMADFEKRFEHL----RIKTLLSEEYDGDNAIVTLHAGAGGTEACDWVSMLFRMYTRW 116

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    +   VL   D ++ G K +   I+G   +  MK E G+HR+ R+    A+G+  T
Sbjct: 117 AEKHGFTTTVLDYLDGEEAGIKSVTVEIAGENAYGYMKSEKGIHRLVRISPFNAAGKRQT 176

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+  V+P+  E  D++I  +D+RIDT R+SG+GGQH+N T SA+RITH+PT I+V   
Sbjct: 177 SFASCDVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTNIVVQCQ 236

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-I 316
           +E+SQH N+ +AM++L+A+LY ++++    + S  R  ++       +IR+Y     + +
Sbjct: 237 NERSQHMNKDKAMQMLKAKLYLLKQQENQEKLSGIR-GEVKDNAWGSQIRSYVMQPYKLV 295

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            DHR       ++ V+ G ID  IN  L  + 
Sbjct: 296 KDHRTGAESSNVDAVMDGDIDLFINAYLKWNN 327


>gi|304407676|ref|ZP_07389327.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9]
 gi|304343159|gb|EFM09002.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9]
          Length = 329

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 107/330 (32%), Positives = 175/330 (53%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSDSEIRDLAQ 80
           M+     D   K     + ++ + S +  Y++   +  DL T++   +   D        
Sbjct: 1   MTAPDFWDDNDKAQAVISEMNAVKSTVEKYEKLAGDHDDLSTMLEMVEEEGDDSFESELT 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             V ++ K I + E      LL     D  + ILE+  G GG+E+  +   L+RMY R+A
Sbjct: 61  EGVESLVKRISDFELT----LLLNQPYDKLNAILELHPGAGGTESQDWGQMLYRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               +KVE+L     D+ G K +  +I G   +  +K E GVHR+ R+   ++SGR HTS
Sbjct: 117 EKSGFKVELLDYLPGDEAGIKSVTISIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTS 176

Query: 201 AATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +  V+P    +I+++I  ED+++DT RASG+GGQHVN T+SA+RITHIP+GI+V   +
Sbjct: 177 FVSCDVMPEIEDDIEIEIRTEDLKVDTYRASGAGGQHVNKTESAIRITHIPSGIIVACQT 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ QNR +AMK+LR++LY+ + +      +  R  Q        +IR+Y F     + 
Sbjct: 237 QRSQIQNREQAMKMLRSKLYERKIEEQQKHLAEIRGEQ-SDIAWGSQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR ++    +  V+ G +D  I+  L + 
Sbjct: 296 DHRTSVETGNVGAVMDGDLDAFIDGYLRSQ 325


>gi|325295572|ref|YP_004282086.1| hypothetical protein Dester_1396 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066020|gb|ADY74027.1| hypothetical protein Dester_1396 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 374

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 183/346 (52%), Gaps = 6/346 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  +K +  EIE  MS +   +   K        + I S+++ +   +Q+ +D+ T   
Sbjct: 27  DIEKMKKKLTEIEEEMSSANFWNDQKKAQSISMERNRIESELNTFSSIEQQLEDIET--L 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++ E  +    E  +  K I    N +    +     D  + I+ I AG GG+E+  
Sbjct: 85  LEIAEEESEESLLDEAESFLKNIERELNSLEVKTVLSGEFDKNNAIVTIHAGAGGTESCD 144

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  + ++ E+L   +N++ G K     I G   +  ++ E G HR+ R
Sbjct: 145 WAEMLMRMYLRWAERKGFETEILDLQENEEAGIKSATILIKGAYAYGLLRAEHGTHRLVR 204

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS   V V+P    +ID++I  ED+RIDT RASG+GGQHVN TDSAVRI
Sbjct: 205 ISPFDSNARRHTSFCGVIVVPEIDEDIDIEIKDEDLRIDTYRASGAGGQHVNKTDSAVRI 264

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   SE+SQ QNR RAMK+L+ARLY++ER++   + +  R  +  +     +
Sbjct: 265 THLPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAEAR-GEHKTIAWGNQ 323

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y F   + + DHR  +    +  V+ G ID  I   L     +
Sbjct: 324 IRSYVFHPYQMVKDHRTGIETSNINAVMDGEIDQFIEGFLKQKARE 369


>gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
           18811]
          Length = 372

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 183/343 (53%), Gaps = 5/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A+ E RM+ES   D  +K  +     + + ++   +     + +++  +I 
Sbjct: 25  DLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNLTSQAEEIDLLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D    ++      +I K  +++E      LL +  D   + ILE+  G+GG+E+  
Sbjct: 85  MLSEDVTDSEMMSELEESIVKAQKDIETYNLEQLLTEPYDA-NNAILEVHPGSGGTESTD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L+RMY R+A    ++V+VL     D+ G       I+G   F  ++ E GVHR  R
Sbjct: 144 WGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRFVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS  +V V+PE    ID++I  +D+++D  R+ G+GGQ+VN   + VR+
Sbjct: 204 ISPFDSAGRRHTSFVSVDVMPELDDTIDIEIRDDDVKMDVFRSGGAGGQNVNKVSTGVRL 263

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V+S+ E++Q+ NR  AM++L+ +LY +E ++   ER+A    ++ +G    +
Sbjct: 264 THEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGDKLENG-WGSQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y     + + DHR +    + + VL G +D  IN  L   
Sbjct: 323 IRSYVLHPYQMVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304]
 gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399]
 gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355]
          Length = 341

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 6   KKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 65

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 66  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 297

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 298 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339


>gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
 gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
          Length = 332

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/331 (35%), Positives = 180/331 (54%), Gaps = 10/331 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRD 77
           E +MS     D   +  +    ++ +   IS Y Q +    D+  +  +G    D  + D
Sbjct: 2   EHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVYD 61

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
               E+ A+ K++ +LE  +          D  + IL + AG GG+EA  +   L RMY 
Sbjct: 62  EVAAELRALAKDLEQLELTVL----LTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYM 117

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+A  R +KVE+L +   ++ G K    T++GR  +  +K E GVHR+ R+   +ASGR 
Sbjct: 118 RWAEKRGYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRR 177

Query: 198 HTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           HTS A V V+PE  +    +    D++IDT R+ G+GGQHVN T+SAVRITH+PTGI+V 
Sbjct: 178 HTSFAAVDVMPEIDDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQ 237

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG- 314
             SE+SQ QNR +AM++LRA+L+++ER++   ++S        + +   +IR+Y F    
Sbjct: 238 CQSERSQIQNREQAMRLLRAKLFELERQKREQKKSELA-GDYQAIEWGSQIRSYVFHPYN 296

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + DHR N     ++ V+ G ID  I   L 
Sbjct: 297 LVKDHRTNAETGNVQAVMDGEIDLFIEAYLR 327


>gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
 gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
          Length = 373

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 10/353 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++ + K R  E   + S     D   K  +  + +S +  +I      +    D  
Sbjct: 24  LDLDRLHEDKARLEE---QASAPDLWDDQAKAQQVTSQLSYVNGEIDKLGSLRSRLDDAR 80

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    ++ +   LA++E             ++    L     D +  ++ IRAG GG 
Sbjct: 81  VLLELAEAEDDPGVLAEVETEIGALTKSI--QDMEVRTLLSGEYDSREALVAIRAGAGGV 138

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA F   L RMY R+A    +  EV  +S  ++ G K     +     +  +  ESG H
Sbjct: 139 DAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTLSVESGTH 198

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +  GR  TS A V VLP       +DIP  ++R+D  R+SG GGQ VNTTDS
Sbjct: 199 RLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQSVNTTDS 258

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+THIPTGI+V   +EKSQ QN+  A++VL+ARL + +R+    + +  +    GS  
Sbjct: 259 AVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERKRQEEQAKLNGLKTDAAGS-- 316

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
             +++R+Y     + + D R          V  G +D  I   +   + + + 
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGELDSFIEAGIRWRKQRQLA 369


>gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
 gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
 gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
           intestinalis M50/1]
 gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
           intestinalis XB6B4]
          Length = 338

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 109/331 (32%), Positives = 176/331 (53%), Gaps = 14/331 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQ 80
           M      D  +   ++   +  +   ++ Y   K E +D+ T+I      +D+ +    Q
Sbjct: 1   MEAPNFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYEENDASLIPEIQ 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +    K    +        L     D    I+ + AG GG+E+  +   L+RMY R+A
Sbjct: 61  EMLDEFTKTYEGI----RIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
           + + + VEVL S D ++ G K I   I+G   +  MK E GVHR+ R+    A+G+  TS
Sbjct: 117 SDKGFSVEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTS 176

Query: 201 AATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +  V+P+  E  DV+I  +D+RIDT R+SG+GGQH+N T SA+RITHIPTGI+V   +
Sbjct: 177 FVSCDVMPDIEEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQN 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG-R 315
           E+SQ QN+ +AM++L+A+LY ++++  A + +  R    +IG G+   +IR+Y       
Sbjct: 237 ERSQFQNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGN---QIRSYVMQPYTM 293

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + DHR  +    ++ V+ G ID  IN  L  
Sbjct: 294 VKDHRTGVETGNVDSVMDGKIDIFINGYLKW 324


>gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862]
          Length = 332

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 100/335 (29%), Positives = 165/335 (49%), Gaps = 12/335 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQK---KQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +  +   +   A + +  +   Y       +  +    ++ +   +    ++ 
Sbjct: 1   MAQPDFWNDNVAAQKVIDANNILKGRRDDYLNLTAGVENVETALELLAEMPDEDMQAEME 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                                 L  +  D  + ILEI  G+GG+E+A +  +L RMY R+
Sbjct: 61  ADLEKLAADL-----ESYRLAQLLNEPYDKNNAILEIHPGSGGTESADWGANLQRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    +KVE++     D  G       I+G   +  ++ E GVHR  R+   +++GR HT
Sbjct: 116 AERHGFKVEIMDYHPGDVAGIDSATLMITGHNAYGYLRSERGVHRFVRISPFDSAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  ++ V+PE    +DVDI   D+++D  RASG+GGQH+N T SAVR+THIPTGI+V + 
Sbjct: 176 SFVSIDVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGIVVASQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-I 316
            ++SQ QN+  A  +LRA+LY +E  +   ER++    Q+ +G    +IR+Y F   R +
Sbjct: 236 QQRSQFQNKDTAYAMLRAKLYQLEMDKKEKERASIAGEQLENG-WGSQIRSYVFQPYRMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            DHR N      + V+ G +D  IN  L    A+ 
Sbjct: 295 KDHRTNYESGNPQGVMDGDLDPFINAYLRWKLAEQ 329


>gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
 gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
          Length = 378

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 169/347 (48%), Gaps = 12/347 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHT 64
            +   + R  E++  M E        K  +   E   +   +   +      ++ + L  
Sbjct: 26  DLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEARHLKDELEGFTALKGNYEDIEALIQ 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + N DS I ++ ++     E+  +         LL     D  + IL + AG GG+E
Sbjct: 86  MGKEENDDSVIPEIRELLDSFSERLDQMNTT-----LLLSGEYDSMNVILRLNAGAGGTE 140

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  + G L+RMY R+A    + V++L   D D+ G K +   + G   +  ++ ESG+HR
Sbjct: 141 ANDWAGILYRMYTRWAERHGFTVKILDYLDGDEAGIKSVTMEVVGEYAYGYLRSESGIHR 200

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    A G+  TS  +  V+P+   +ID++I  EDI+++  RASG+GGQH+N T SA
Sbjct: 201 LVRISPFNAQGKRQTSFVSCDVMPDIETDIDIEIREEDIKMEVFRASGAGGQHINKTSSA 260

Query: 244 VRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ HIPTG +     E+SQ QN+ +AM++L+ +LY  E++    + +  R  ++     
Sbjct: 261 VRLIHIPTGFVAACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAGIR-GEVKDNGW 319

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
             +IR+Y     R + D R        + VL G ID  I+  L   Q
Sbjct: 320 GSQIRSYVLQPYRMVKDLRTGEESGNTDAVLDGDIDRFISAYLKWMQ 366


>gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
 gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
          Length = 327

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 111/328 (33%), Positives = 168/328 (51%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    +   K        + +   ++ Y +  +  ++L         + +     ++E
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                      E E+  L    +  D  + ILE+  G GG+E+  +   L RMY R+   
Sbjct: 61  KELKSLTKEFNEFELQLL--LSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  +  D+DI  EDI++DT RASG+GGQHVNTTDSAVRITH+PT ++V   +E+
Sbjct: 179 SCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR RAMK+L+A+LY    +    E    R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 296 DHRTNTEMGNVQAVMDGDIDTFIDAYLR 323


>gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
          Length = 341

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 6   KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 65

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 66  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +++E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 121 AGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 297

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 298 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339


>gi|312194810|ref|YP_004014871.1| peptide chain release factor 1 [Frankia sp. EuI1c]
 gi|311226146|gb|ADP79001.1| peptide chain release factor 1 [Frankia sp. EuI1c]
          Length = 360

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 144/335 (42%), Positives = 203/335 (60%), Gaps = 19/335 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  + +  A IE R+++    +       L   YA ++PI+      +Q   + +    +
Sbjct: 5   LERMLDEHAVIEKRLADPAVHNDVGEARALGRRYAELAPIVELAREIEQANGDLETAREL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +   D   R        AI+   + L      LL P D DD +  ILE++AG GG E+
Sbjct: 65  AVE---DPSFRAEVTDLETAIQDRRQRL----RTLLAPTDPDDGRDAILEVKAGAGGEES 117

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG--------RGVFSRMK 177
           ALF GDL RMY RYA  R WK E+L ++ +D GGY+++   +           GV+ R++
Sbjct: 118 ALFAGDLLRMYLRYAERRGWKTEILEANPSDLGGYRDVSVAVKYRGQVPPGQPGVYGRLR 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FE GVHRVQRVP TE++GR+HTSAA V V+PEA E+DV I   D+RID  R+SG GGQ V
Sbjct: 178 FEGGVHRVQRVPVTESAGRIHTSAAGVLVMPEAEEVDVQIDPNDLRIDVFRSSGPGGQSV 237

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+PTG++V   +EKSQ QN+  A+++LRARL  V R++  +E+SA R  Q
Sbjct: 238 NTTDSAVRITHVPTGVVVSCQNEKSQLQNKESALRILRARLLTVAREKAESEKSAARASQ 297

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYV 331
           + + DRS+++RTYNF + RI DHR+N   + LE V
Sbjct: 298 VRTMDRSDKVRTYNFPENRIADHRVNYKAHNLEAV 332


>gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
 gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
 gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
 gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
          Length = 365

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 184/344 (53%), Gaps = 14/344 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL----HT 64
           +   +    E + +M  +   D   K  E   A + I  K++ +   + E ++L      
Sbjct: 26  VEQKEAEIKEYDDQMQVAGFWDDQRKAQEVINAANAIKDKVNTFYSLEGEVEELAVAFEL 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ + ++D +    +QIE ++      ELE      +L     D  + ILE+  G GG+E
Sbjct: 86  ILEEPDADLQAELESQIEEVSEHLNKFELE------ILLSGPYDANNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L+RMY RYA  + +K+EVL     ++ G K +   I G   F   K E GVHR
Sbjct: 140 SQDWAEMLYRMYTRYAERKGFKIEVLDYLVGEEAGIKSVTIKIKGTNAFGYFKAERGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++ GR HTS  +  V+PE + +ID++I  ED++IDT RASG+GGQH+NTTDSA
Sbjct: 200 LVRISPFDSGGRRHTSFCSCDVMPEFSGDIDIEIRAEDLKIDTYRASGAGGQHINTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPT  +V   +++SQ +NR  AM++L+++LY  + +    E +  R  ++     
Sbjct: 260 VRITHIPTNTIVTCQNQRSQIKNREAAMEMLKSKLYQRKLEEQEAELAKIR-GEVKEIGW 318

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y F     + DHR +  +  ++ V+ G +D  I+  L 
Sbjct: 319 GSQIRSYVFHPYSLVKDHRTSYEVGNVQSVMDGDLDGFIDAYLR 362


>gi|326790220|ref|YP_004308041.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
 gi|326540984|gb|ADZ82843.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
          Length = 369

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 183/349 (52%), Gaps = 10/349 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   I   K + +E+E    ++   +   +       +     +I  YD+     +D+
Sbjct: 21  MGNRLDIEGCKVKASELEEMSMDNAFWNDIERAQSVLQQLKNYKDRIEKYDKLCGSFEDI 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I   N D +I    + +  A   E    E  +    L     D  + ILE+  G GG
Sbjct: 81  LVLIEMANEDEDIGLAEEAKACAKTFEEDYSE--MLTATLLDQEYDRNNAILELHPGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +V  LFRMY R+A  + +KVEVL   D D+ G K +   ISG   +  +K E G+
Sbjct: 139 TEACDWVAMLFRMYTRWADRKGFKVEVLDYLDGDEAGIKSVTIQISGENAYGYLKSEKGI 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   ++SGR HTS A+  V+PE  +  ++DI  ED+RIDT R++G+GGQHVNTTD
Sbjct: 199 HRLVRISPFDSSGRRHTSFASCDVIPEITDEIEIDIRPEDLRIDTYRSTGAGGQHVNTTD 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIG 298
           SAVRITH+PT I+V   +E+SQ QNR RAM++L+A+LY+ E++   +     R  K  I 
Sbjct: 259 SAVRITHLPTNIVVQCQNERSQIQNRERAMQMLKAKLYEKEQEERMDRIDGIRGEKKDIA 318

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            G    +IR+Y F     + DHR +        V+ G ID  +N  L  
Sbjct: 319 WG---SQIRSYVFHPYNMVKDHRTSEETGNTSAVMDGDIDRFMNAYLGW 364


>gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568]
 gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902]
 gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945]
 gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136]
 gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149]
          Length = 341

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 6   KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 65

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 66  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 297

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 298 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339


>gi|332307386|ref|YP_004435237.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174715|gb|AEE23969.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 365

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 169/343 (49%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +      +       L +E  A+  ++  I   +Q   + ++L   +
Sbjct: 28  DQKSERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGCVDVEELLE-L 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               SD +  D A+ ++  +  ++  LE    +  +    +D     ++I++G+GG+EA 
Sbjct: 87  AVEESDQDTFDEAEKDLAELVAKLETLE----FRRMFSGPNDANDGYIDIQSGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+     +K E++  SD D  G K       G   F  ++ E+GVHR+ 
Sbjct: 143 DWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V   PE  +         D+RIDT RASG+GGQHVN TDSAVR
Sbjct: 203 RKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRTDSAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH PT I+V   +++SQH+N+ +AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 263 ITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQNMEDSKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIQASLK 362


>gi|325478551|gb|EGC81663.1| peptide chain release factor 2 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 347

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 168/341 (49%), Gaps = 8/341 (2%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           LK+   ++E +       +      +  A ++     +  Y++ K    D   ++     
Sbjct: 10  LKDEIEKLEKKSQSPDFWNDSDAAQKTMADLALKKDDLEDYNKLKDGIADNTDMLDLVEL 69

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
             +       EV    K++ +L   +          D  +  L I AG GG EA  +   
Sbjct: 70  SEDSELKTIEEVEISLKKLDKLAQAMKLKTQLSGEYDKNNAYLSINAGAGGLEATDWADM 129

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY RY   R +K ++   ++ + GG K +   + G   +  +K E GVHR+ R+   
Sbjct: 130 LFRMYTRYFDDRGFKYDIKDLNNEEAGGIKSVTIHVKGSYAYGYLKGEKGVHRLVRISPF 189

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           ++  R HTS ++V + PE   +I +DI   D+RIDT RASG+GGQHVN TDSAVRITHIP
Sbjct: 190 DSQSRRHTSFSSVDIFPELDDDIQIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIP 249

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIR 307
           TG++  + +E+SQ QNR  AM +L ++L  ++ +    +    +    QI  G    +IR
Sbjct: 250 TGVVATSQAERSQIQNRQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWG---SQIR 306

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F     + DHR N  +  +E V+ G I   I+  L ++
Sbjct: 307 SYVFQPYTMVKDHRTNFEMGNVESVMDGNIQGFIDAYLASN 347


>gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
 gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
          Length = 378

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 164/342 (47%), Gaps = 7/342 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  L+ + AE+E + +     +   K     + +S +  +++  ++  +  +DL  +  
Sbjct: 25  DIDGLRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEELARRLEDLPVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   LA+ E    + +       +    L     D++  ++ I A  GG +AA 
Sbjct: 85  LAAEEGDQEALAEAERELAKLKSDI--GALEVRTLLSGEYDEREALITINAQAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  + +  E+  +S  ++ G K +  T+     +  +K E G HR+ R
Sbjct: 143 WAQMLLRMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTLKGEHGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V V+P      D++I  ++IRID  R+SG GGQ VNTTDSAVRI
Sbjct: 203 ISPFDNQARRQTSFAGVDVMPVVEQTDDIEINEDEIRIDVYRSSGPGGQGVNTTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QNR  AM VL+A+L + +R+  A   +  R     +     +
Sbjct: 263 THLPTGIVVSCQNERSQLQNRATAMAVLKAKLLERKRQEEAQAMAELRGE--TTTSWGTQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y     + + D R  +       VL G +D  I   +  
Sbjct: 321 IRNYVLHPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEIRW 362


>gi|218459801|ref|ZP_03499892.1| peptide chain release factor 1 [Rhizobium etli Kim 5]
          Length = 230

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 163/228 (71%), Positives = 202/228 (88%)

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
           GDLFRMYER+A+ + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFESGVHRVQRVP
Sbjct: 1   GDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVP 60

Query: 190 ATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            TEA GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTTDSAVRITH+
Sbjct: 61  ETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHL 120

Query: 250 PTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           P+GI+VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSGDRSERIRTY
Sbjct: 121 PSGIVVTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSGDRSERIRTY 180

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           NF QGR+TDHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 181 NFPQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 228


>gi|194246573|ref|YP_002004212.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma
           mali]
 gi|193806930|emb|CAP18362.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma
           mali]
          Length = 347

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 135/344 (39%), Positives = 208/344 (60%), Gaps = 2/344 (0%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            ++  +  ++  ++  +    +    ++L +E   +  I+   + Y   ++E   +   I
Sbjct: 3   DKLKKINQKYLNLQKLILLETNSKKKVQLFKEIGNLKEIVDNYNEYLNLEKELLKIKHFI 62

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELE-NEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            + +++++       +   I  E    E  +I YLL P + +D+K+ I++I+   GG EA
Sbjct: 63  QNDSNNNDDLLNLAFQEQEILNEKIHNELKKIKYLLFPLEPEDNKNVIMQIKGAAGGDEA 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            LF  DLFRMY +YA L+ WK+E+L+   N  GG   +   +SG+ V+  +K+ESGVHRV
Sbjct: 123 NLFSADLFRMYCKYAELKNWKLEILNLMTNIKGGISSVEFILSGKKVYYFLKYESGVHRV 182

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE  GR+HTS +TV V+PE  EID  I  +DIR DT  +SG GGQ VNTT SAVR
Sbjct: 183 QRVPTTEVQGRIHTSTSTVLVMPEVDEIDFKIDWKDIRFDTFNSSGPGGQSVNTTKSAVR 242

Query: 246 ITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +TH+P+ I +     KSQH+N+ +A  +L+AR+YD   K+   + +  RK  +G G RSE
Sbjct: 243 LTHLPSNISVACQIGKSQHENKKKAFSLLKARIYDKIHKQNMEKENKKRKFLVGDGQRSE 302

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +IRTYN+ Q RITDHRI+L L KL+ +++G +D II PL+  + 
Sbjct: 303 KIRTYNYPQNRITDHRISLNLKKLDIIMEGKLDFIIEPLIDEYN 346


>gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 327

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 111/331 (33%), Positives = 167/331 (50%), Gaps = 16/331 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +   K          +   ++     ++  +E Q  H ++ +        +L 
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +             LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  KELKSLTKDFNE-----FELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 GERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  D+DI  EDI++DT RASG+GGQHVNTTDSAVRITH+PT ++V   
Sbjct: 176 SFVSCEVMPEFNDEIDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ +NR RAMK+L+A+LY    +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 TERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLR 323


>gi|118594576|ref|ZP_01551923.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
 gi|118440354|gb|EAV46981.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
          Length = 355

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 180/346 (52%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            + + K     + ++  +  +        K+ +E   +  I+ +         + Q+L  
Sbjct: 16  DLEEKKRTIKLLSIQQEDPKTWSDRALSQKIGKEKKVLEDIVHQADSLISDLADNQELFD 75

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + N            + +  +++ +  ++I +  +     D  +C ++ ++G+GG+E
Sbjct: 76  MAVEEND-----LNTLTTIKSDTEKLEKSVDDIEFKRMFSHPMDPNNCFVDFQSGSGGTE 130

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   LFRMY RYA  + +K+EVL  ++ +  G K     I G   F  ++ ESG+HR
Sbjct: 131 AQDWANMLFRMYTRYAERKNFKIEVLEYTEGEVAGIKGATLKIIGDYAFGFLRTESGIHR 190

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    ++  R HTS A V V PE  E  D+DI   D+RIDT RASG+GGQH+N TDSA
Sbjct: 191 LVRKSPFDSGSRRHTSFAGVNVYPEIDESIDIDINPSDLRIDTYRASGAGGQHINKTDSA 250

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           VRITH+PT  +V   +++SQH+N+ +AM +L+A+LY +E  +   E+ A    K  IG G
Sbjct: 251 VRITHVPTNTVVQCQNDRSQHRNKAQAMNMLKAQLYAIELSKRNEEKQAMEDAKTDIGWG 310

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y   Q RI D R NL +   + VL G +D  I+  L  
Sbjct: 311 ---HQIRSYVLDQSRIKDLRTNLEVGNTQGVLDGDLDMFISESLKQ 353


>gi|144897340|emb|CAM74204.1| peptide chain release factor 2 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 372

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 164/341 (48%), Gaps = 16/341 (4%)

Query: 15  RFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  E+  +  +    +      KL  E   +   +S     +    +   L  +      
Sbjct: 31  RLDELNAQAEDPNLWNDGDKAQKLMRERTQLDTQVSGCRKLEADLDDMLGLIELA----- 85

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D+E       +  A  + +++L  ++    L     D   C LEI +G GG+EA  +   
Sbjct: 86  DAEGDTDVAADAEAQLRALKDLAGKLELETLLSGEADANDCYLEINSGAGGTEAQDWAEM 145

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A    +K+E +  S  +  G K     + G   +  +K E+GVHR+ R+   
Sbjct: 146 LLRMYSRWAEQHGYKLEFVEESAGEGAGIKSATIRVVGHNAYGWLKTEAGVHRLVRISPF 205

Query: 192 EASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R  TS A+  V P     ID+ I   D RIDT RASG+GGQH+N TDSAVRITHIP
Sbjct: 206 DSNARRQTSFASAWVYPVVDDTIDIQINESDCRIDTYRASGAGGQHINKTDSAVRITHIP 265

Query: 251 TGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIR 307
           TGI +   +E+SQHQNR RA  +LRARLY+ E ++         + K  IG G    +IR
Sbjct: 266 TGIAVACQTERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDTKTDIGWG---HQIR 322

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y     + I D R N+     + VL G +D  +   L + 
Sbjct: 323 SYVLQPYQMIKDLRTNVETSDTQAVLDGDLDMFMAASLASR 363


>gi|327327350|gb|EGE69126.1| peptide chain release factor 1 [Propionibacterium acnes HL103PA1]
          Length = 400

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 201/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++    EIE ++++   +       +L + +A +  ++S     DQ + 
Sbjct: 40  MSESAQQAIDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 99

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 100 DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 152

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 153 SGEGGEESALFAADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYG 212

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   +IR+D  R+SG GG
Sbjct: 213 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEIRVDVYRSSGPGG 272

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+ TGI+V   +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 273 QGVNTTDSAVRLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 332

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 333 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 392

Query: 354 SASE 357
              E
Sbjct: 393 QRPE 396


>gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
 gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
          Length = 328

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 106/335 (31%), Positives = 169/335 (50%), Gaps = 16/335 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M++    +   +        + +  ++  +    +   DL     ++ + +      +L 
Sbjct: 1   MADPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTELASELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                +    +++  N+    LL     D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  -----SGLAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R + VE L     ++ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFAVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE    +D+++  ED++IDT RASG+GGQHVNTTDSAVRITH+PT  +V   
Sbjct: 176 SFVSCEVMPELDDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+++A+LY +  +    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREQAMKMMKAKLYQLRIEEQERELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            + DHR    +     V+ G ID  I+  L    A
Sbjct: 293 MVKDHRTGFEIGNTNSVMDGEIDGFIDAYLRQSLA 327


>gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2]
 gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira
           crunogena XCL-2]
          Length = 332

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 112/336 (33%), Positives = 175/336 (52%), Gaps = 15/336 (4%)

Query: 18  EIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           E+E  + +    +       L +E + +  +++ I   +   +   ++  +  + ++D E
Sbjct: 3   EVERELEDPTVWNDPERAQALGKEKSQLDNVVTTIQDLESSLESAHEILEMA-EMDADQE 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
           + D    E+  +E+++ +LE +           D  +C LEI+AG+GG+EA  +   + R
Sbjct: 62  MVDEVVSELARLEEKLEQLEFQRM----FSGELDANNCYLEIQAGSGGTEAQDWANMILR 117

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A    +K E+L  S  D  G K     + G   F  ++ E+GVHR+ R    ++ 
Sbjct: 118 MYLRWAESHGFKAEILEISAGDVAGIKGATVHVQGDYAFGWLRTETGVHRLVRKSPFDSG 177

Query: 195 GRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS A+V + PE     +V+I   D+RID  RASG+GGQHVN T+SAVRITH+PT  
Sbjct: 178 NRRHTSFASVFISPEIDDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNT 237

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDRSERIRTYN 310
           +    + +SQHQN+  AMK LRA+LY++E   +    +     K  IG G    +IR+Y 
Sbjct: 238 VTQCQNGRSQHQNKAEAMKQLRAKLYELEMLSRNAEKQEMEENKSDIGWG---SQIRSYV 294

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              GRI D R N+       VL G +D  I P L A
Sbjct: 295 LDSGRIKDLRTNVETGNTNGVLDGDLDQFIIPSLKA 330


>gi|83942252|ref|ZP_00954713.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
 gi|83846345|gb|EAP84221.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
          Length = 374

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 121/337 (35%), Positives = 173/337 (51%), Gaps = 13/337 (3%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSD 72
           R  E   R+ +    D      +       ++  I+ Y+  KQE  D   +I   +   D
Sbjct: 31  RLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEGIKQELADNIELIELGEMEGD 90

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E+   A+  +  + +   + E       L     D     LEI AG GG+E+  +   L
Sbjct: 91  DEVIAEAETALKKLAETAAQKEL----EALLNGEADGNDTFLEINAGAGGTESCDWANIL 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +
Sbjct: 147 SRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWLKSESGVHRLVRISPFD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ + HTS  ++ V P     I++DI   DIRIDT R+SG+GGQHVNTTDSAVRITH PT
Sbjct: 207 SAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQHVNTTDSAVRITHHPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSERIRTY 309
           GI+VTSSEKSQHQNR  AMK L++RLY +E  R       +   K   G G+   +IR+Y
Sbjct: 267 GIVVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHENKGDAGWGN---QIRSY 323

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
                + + D R N      + VL G +D ++   L 
Sbjct: 324 VLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGAALA 360


>gi|313901293|ref|ZP_07834780.1| peptide chain release factor 2 [Clostridium sp. HGF2]
 gi|312953901|gb|EFR35582.1| peptide chain release factor 2 [Clostridium sp. HGF2]
          Length = 349

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 96/349 (27%), Positives = 170/349 (48%), Gaps = 12/349 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEE 59
            +SH  + + K++  E+     +    +          +   I  I+      +      
Sbjct: 4   LVSHFDLAEKKHKIQELTSMTLQDDFWNDPQHAQTLIRQLNGIKDIVESYEKLNSALIGL 63

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++ H ++ +   D            A   E+ +  ++    +L     D  S ILE+  G
Sbjct: 64  EETHDLLKEDYDDEIFE-----LFEAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPG 118

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+E+  +   L+RMY R+A  + +KV VL     D+ G K +   + G   +  +K E
Sbjct: 119 AGGTESCDWADMLYRMYSRWAEKKGFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAE 178

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVN 238
            GVHR+ R+   ++ GR HTS A++ V+P+     +++I  ED+ ++T RASG+GGQH+N
Sbjct: 179 KGVHRLVRISPFDSGGRRHTSFASLDVMPQFNNEIEIEIKPEDLIVETKRASGAGGQHIN 238

Query: 239 TTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVR+ H PTG++ +  + +SQH+NR  A++VL++RLY    +      +  +  Q 
Sbjct: 239 KTDSAVRMVHKPTGLVAICQNGRSQHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQK 298

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + +   +IR+Y F     + DHR +     ++ V+ G +D  I   L 
Sbjct: 299 AN-EWGSQIRSYVFHPYSMVKDHRTSCETSDVQGVMDGDLDAFIFAYLK 346


>gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
 gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
          Length = 368

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+   + +S          ++  E  ++   +  +   +++  + ++L  + 
Sbjct: 30  DSKQTRLNELTRLLEDSTVWSDSKRTQEIGREKKSLEDTVVTLVSMEKQLGDAKELFQIA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D        + A + +    + I +    + +  +     D  +C ++I++G+GG+EA 
Sbjct: 90  KDEAD-----EAALVSISLDAENIEKAIANLEFRRMFSGPMDSNNCFVDIQSGSGGTEAQ 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RY   + + VE+L  S  D  G K     ISG   +  ++ E+GVHR+ 
Sbjct: 145 DWAAMLERMYLRYCERQGFDVEILEESPGDIAGIKSATLKISGEYAYGFLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS ++V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSA+R
Sbjct: 205 RKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRIDTFRASGAGGQHINKTDSAIR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH PTGI+V   S +SQH+N+  A+ +L++RL++ E ++   E+      K  IG G  
Sbjct: 265 ITHNPTGIVVQCQSGRSQHRNKADALTMLKSRLFEAELRKRNEEKQAIEENKTDIGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N+ +   + VL G ++  I   L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNVEVGNTQNVLDGDLNSFIEASLKQ 365


>gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
 gi|259585260|sp|C5BYB6|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
          Length = 374

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 11/347 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
             L+ R AE+    +     D      +  + +S   S++   D  +    DL T+  + 
Sbjct: 26  DALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTLRSRIDDLETLVQLA 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D++    A+ E+  I   + ELE       L     D +  ++ IR+G GG +AA 
Sbjct: 86  AEEDDADTLAEAEAELTKIRTSMGELEV----RTLLAGEYDSREAVVTIRSGAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A  + +  +VL +S  ++ G K     +     F  +  E+G HR+ R
Sbjct: 142 FAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLSVEAGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P       +DIP  DIRID  R+SG GGQ VNTTDSAVRI
Sbjct: 202 ISPFDNQGRRQTSFAAVEVIPLIEQTDHIDIPETDIRIDVFRSSGPGGQSVNTTDSAVRI 261

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V+  +EKSQ QNR  AM+VL++RL    ++    ++         S    ++
Sbjct: 262 THLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLLAMQEEENAKKKELAGDVKAS--WGDQ 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +R+Y     + + D R    +     V  G IDD I   +   + + 
Sbjct: 320 MRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRRQQQ 366


>gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101]
 gi|123145940|sp|Q0SR12|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 364

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   +  L+ + AE+EL+M E+   D   K  E       +  KI  +    +   D+
Sbjct: 22  MGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDV 81

Query: 63  HTVIG-DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             +      +D E       EV A+ KEI  L        +     D  + IL +  G G
Sbjct: 82  EVLKELMEENDEETAKEIISEVKALSKEIDTL----KIETILSGEYDRNNAILTLHTGVG 137

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           GS+A  +   L RMY R+   + + +E +     D+ G K +   + G   +  +K E G
Sbjct: 138 GSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKG 197

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           +HR+ R+    A+G+  TS A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T
Sbjct: 198 IHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKT 257

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRITHIPTGI+V   +E+SQ  NR  AM +L+++L +++ +R   E+  +   ++  
Sbjct: 258 ESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKD 316

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
                +IR+Y F     + DHR N+    +  V+ G ID+ I   L
Sbjct: 317 MGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362


>gi|83955487|ref|ZP_00964118.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
 gi|83840131|gb|EAP79306.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
          Length = 374

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 121/337 (35%), Positives = 173/337 (51%), Gaps = 13/337 (3%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSD 72
           R  E   R+ +    D      +       ++  I+ Y+  KQE  D   +I   +   D
Sbjct: 31  RLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEGIKQELADNIELIELGEMEGD 90

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E+   A+  +  + +   + E       L     D     LEI AG GG+E+  +   L
Sbjct: 91  DEVIAEAETALKKLAETAAQKEL----EALLNGEADGNDTFLEINAGAGGTESCDWANIL 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +
Sbjct: 147 SRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWLKSESGVHRLVRISPFD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ + HTS  ++ V P     I++DI   DIRIDT R+SG+GGQHVNTTDSAVRITH PT
Sbjct: 207 SAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQHVNTTDSAVRITHHPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSERIRTY 309
           GI+VTSSEKSQHQNR  AMK L++RLY +E  R       +   K   G G+   +IR+Y
Sbjct: 267 GIVVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHENKGDAGWGN---QIRSY 323

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
                + + D R N      + VL G +D ++   L 
Sbjct: 324 VLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALA 360


>gi|314981451|gb|EFT25545.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA3]
          Length = 379

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 201/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++    EIE ++++   +       +L + +A +  ++S     DQ + 
Sbjct: 19  MSESAQQAIDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 78

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 79  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 131

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 132 SGEGGEESALFAADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYG 191

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   +IR+D  R+SG GG
Sbjct: 192 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEIRVDVYRSSGPGG 251

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+ TGI+V   +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 252 QGVNTTDSAVRLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 311

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 312 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 371

Query: 354 SASE 357
              E
Sbjct: 372 QRPE 375


>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
 gi|7388057|sp|Q9X1R5|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
          Length = 369

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 104/336 (30%), Positives = 177/336 (52%), Gaps = 8/336 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++     E+E ++++    D   K  E    +  + +      + +   +DL   I   
Sbjct: 29  DEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIELS 88

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           + D E+    +  V  +E  +++LE      ++     D  +  L +  G GG+E+  + 
Sbjct: 89  DEDQEMAQHVEEIVQELEGAVKKLEL----EIILNGKYDPNNAYLSVHPGAGGTESQDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + + VE++     ++ G K+    I G   +  +K ESGVHR+ R+ 
Sbjct: 145 QMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRIS 204

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ R HTS A+V V+PE  +  D++I  ED++I+T RASG GGQ+VN T+SAVRITH
Sbjct: 205 PFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQHQN+  A+K+L+A+LY +E ++   E     + ++       +IR
Sbjct: 265 LPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEI-QGELKDISWGNQIR 323

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINP 342
           +Y F     + DHR  +    ++ V+ G ID  I  
Sbjct: 324 SYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEA 359


>gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
 gi|238690157|sp|B4RCR3|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
          Length = 369

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 168/342 (49%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +  E+  R+ +    +       ++ E + +S  +  +   ++   +      +  +  
Sbjct: 27  RKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLERDLADALGYAELADEEG 86

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            ++ + +         E+  R          L     D     +EI +G GG+E+  + G
Sbjct: 87  DEASLDEARAQLREIKERAAR-----AELEALLSGEADGNDAYVEINSGAGGTESNDWAG 141

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A      V+V+  +  +  G K +   + G   +  +K E+GVHR+ R+  
Sbjct: 142 MLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKTEAGVHRLVRISP 201

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS A+V V P     I+++I   D+R DT RASG+GGQHVN TDSAVR+THI
Sbjct: 202 YDSSARRHTSFASVWVYPVIDDNIEIEINPADVRTDTYRASGAGGQHVNKTDSAVRLTHI 261

Query: 250 PTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI +   +++SQHQNR +A K+LRARLY++E ++    +    ++K  IG G    +I
Sbjct: 262 PTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQKTDIGWG---HQI 318

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R  +     + VL G +D  +   L   
Sbjct: 319 RSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAQR 360


>gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909]
 gi|123602195|sp|Q3K2F4|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift
           [Streptococcus agalactiae A909]
          Length = 365

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 188/348 (54%), Gaps = 12/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E +M+E    +  I   +    ++ +  K   +   ++   +   ++ 
Sbjct: 25  DLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D  +++  +  ++     + ++       LL  +  D  + ILEI  G+GG+EA  
Sbjct: 85  MLDEDDSLKEELEENLMQ----LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+     +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R
Sbjct: 141 WGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS A+V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+
Sbjct: 201 ISPFDSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRL 260

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+V+S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G   
Sbjct: 261 THIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG--- 317

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            +IR+Y F+    + DHR N  L +++ V+ G I+  I+  L      
Sbjct: 318 SQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 365


>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
           BON]
 gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
           australiensis 50-1 BON]
          Length = 353

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 185/347 (53%), Gaps = 10/347 (2%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--H 69
           ++     +E +M++        +  +    I  +  K+      +Q+ +DL T+      
Sbjct: 12  MEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLRTLADLGRE 71

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D+ I      E+ ++ KE+  L        L     D  + I+ + AG GG+EA  +V
Sbjct: 72  EDDASIVGEVAAELASLRKEVERL----RIETLLSGPYDRNNAIVTLHAGAGGTEAQDWV 127

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+A  + +KVEVL   + D+ G K +   + G   +  +K E GVHR+ R+ 
Sbjct: 128 QMLYRMYTRWAEDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRLVRIS 187

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+GR HTS A+V V+PE   +  V+I  ED++IDT R+SG+GGQHVN T+SA+RITH
Sbjct: 188 PFDAAGRRHTSFASVDVMPELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAIRITH 247

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +E+SQH N+  AMK+L+A+L +++ +    + S   K ++   +   +IR
Sbjct: 248 IPTGIVVQCQNERSQHSNKETAMKMLKAKLLELKEQEEQAKISDI-KGELKRIEWGSQIR 306

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +Y F     + DHR N  +  +  V+ G ID  I+  L  +  +   
Sbjct: 307 SYIFQPYTMVKDHRTNAEIGNVNAVMDGDIDLFISEYLKMNAKQRRA 353


>gi|314923482|gb|EFS87313.1| peptide chain release factor 1 [Propionibacterium acnes HL001PA1]
 gi|315092954|gb|EFT64930.1| peptide chain release factor 1 [Propionibacterium acnes HL060PA1]
 gi|315103525|gb|EFT75501.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA2]
          Length = 379

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 201/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++    EIE ++++   +       +L + +A +  ++S     DQ + 
Sbjct: 19  MSESAQQAIDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 78

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 79  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 131

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 132 SGEGGEESALFAADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYG 191

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   +IR+D  R+SG GG
Sbjct: 192 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEIRVDVYRSSGPGG 251

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+ TGI+V   +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 252 QGVNTTDSAVRLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 311

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 312 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 371

Query: 354 SASE 357
              E
Sbjct: 372 QRPE 375


>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
 gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
 gi|238688848|sp|B1LB88|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
 gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
          Length = 367

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 104/336 (30%), Positives = 177/336 (52%), Gaps = 8/336 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++     E+E ++++    D   K  E    +  + +      + +   +DL   I   
Sbjct: 27  DEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIELS 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           + D E+    +  V  +E  +++LE      ++     D  +  L +  G GG+E+  + 
Sbjct: 87  DEDQEMAQHVEEIVQELEGAVKKLEL----EIILNGKYDPNNAYLSVHPGAGGTESQDWA 142

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + + VE++     ++ G K+    I G   +  +K ESGVHR+ R+ 
Sbjct: 143 QMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRIS 202

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ R HTS A+V V+PE  +  D++I  ED++I+T RASG GGQ+VN T+SAVRITH
Sbjct: 203 PFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITH 262

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQHQN+  A+K+L+A+LY +E ++   E     + ++       +IR
Sbjct: 263 LPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEI-QGELKDISWGNQIR 321

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINP 342
           +Y F     + DHR  +    ++ V+ G ID  I  
Sbjct: 322 SYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEA 357


>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
 gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
           parvula DSM 2008]
          Length = 368

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 183/352 (51%), Gaps = 14/352 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
              H  I   ++R   ++++MS+    D   K  E     + + + +  Y Q   + +D 
Sbjct: 19  MGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDA 78

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           + ++ +   D +   +       +++    LE     LLL     D  + IL   AG GG
Sbjct: 79  NVML-EMAIDEDDLSMESEIKEYVKQIEETLEK-QEVLLLLSGEYDANNAILTFHAGAGG 136

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY R+A    + +E++     D+ G K     + G   F  +K E GV
Sbjct: 137 TEAQDWCSMLIRMYLRWAEKSGFSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGV 196

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+ R HTS A V V+PE  +  +++I ++D+++DT RASG+GGQH+N TD
Sbjct: 197 HRLVRISPFDAAARRHTSFAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTD 256

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS- 299
           SAVR+TH PTGI+V   +++SQ QNR +A+++LRA+L+++E ++ A       K QIG  
Sbjct: 257 SAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRAKLFELELEKQAEL-----KEQIGGT 311

Query: 300 ---GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +   +IR+Y F     + DHR ++    ++ V+ G +D  I   L   
Sbjct: 312 YQAIEWGSQIRSYVFHPYNLVKDHRTSVETGNVQAVMDGNLDPFIEGFLKKE 363


>gi|298291326|ref|YP_003693265.1| peptide chain release factor 2 [Starkeya novella DSM 506]
 gi|296927837|gb|ADH88646.1| peptide chain release factor 2 [Starkeya novella DSM 506]
          Length = 376

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 164/343 (47%), Gaps = 16/343 (4%)

Query: 13  KNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           K R AE+     +    +      KL +E   +   +  I   +++  +  +L  +    
Sbjct: 29  KARLAELNALAEDPNLWNDPERAQKLMQERGTLEDGLGAIERINRELADNVELIELGEAE 88

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             DS + + A        +  R          L     D     LE+ AG GG+++  + 
Sbjct: 89  GDDSIVDEAAAALDRLKAEVAR-----RQLEALLSGEADSNDSYLEVHAGAGGTDSQDWA 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  R +KVE++     +  G K     + G   +  +K E GVHR+ R+ 
Sbjct: 144 LMLLRMYTRWAERRGFKVELIEEQAGETAGLKSATMLVKGHNAYGWLKTEGGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R  TS A++ V P   +   VDI   D+R+DTMR+ G+GGQHVN T+SAVR+TH
Sbjct: 204 PFDSNARRQTSFASIDVYPVIDDRIVVDIKEADVRVDTMRSGGAGGQHVNKTESAVRLTH 263

Query: 249 IPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMA--NERSANRKLQIGSGDRSER 305
           IPTGI +V+  ++SQH+NR  A  +LRA+LY++E K+           K  IG G    +
Sbjct: 264 IPTGIAVVSQGDRSQHKNRATAWDMLRAKLYEMELKKREAQAAADQAAKTDIGWG---HQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y     + + D R  +T    + VL G +D  +   L   
Sbjct: 321 IRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363


>gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453]
 gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453]
          Length = 339

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 114/335 (34%), Positives = 173/335 (51%), Gaps = 6/335 (1%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
               E +M+     D   K     A ++ + S +  Y + +Q+  D   +      D E 
Sbjct: 2   IENFEEKMAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELA--DEEG 59

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            D    E+    K++ +   E    LL     D  + ILE+  G GG+E+  +   L RM
Sbjct: 60  DDSLAGEIGETIKDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRM 119

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y R+A  R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SG
Sbjct: 120 YTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSG 179

Query: 196 RVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           R HTS  +  V+PE  +  ++DI  ED++IDT RASG+GGQH+NTTDSAVRITH+PTG++
Sbjct: 180 RRHTSFVSCDVVPEINDEIELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVV 239

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V   +E+SQ +NR RAM +LR++LY+ + +    E +  R  Q        +IR+Y F  
Sbjct: 240 VTCQNERSQIKNRERAMTMLRSKLYERKIEEQKKELAEIRGEQ-SEIAWGSQIRSYVFHP 298

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
                DHR  +    +  V+ G +D  I+  L + 
Sbjct: 299 YSMAKDHRTQVETGNIGAVMDGDLDAFIDGYLRSQ 333


>gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
 gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
          Length = 371

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L+ R  E+E++ S+    +      +  + +S   S+     + +Q   DL  +  
Sbjct: 24  DLEELRRRIDELEMQASDPDLWNDQEHAQKVTSELSHAQSEFRKVSELRQRLDDLPVLYE 83

Query: 68  DHNSDS-EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              ++  + R  A  +  A    +R     +    +     D +  ++ IR+G GG +AA
Sbjct: 84  LAEAEEGDDRVSALADADADRAALRADIEAMEVKTMLAGEYDQRDALVNIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    + VEV  +S  ++ G K     +    ++  +  E G HR+ 
Sbjct: 144 DWALMLMRMYIRWAEQHGYGVEVYDTSYAEEAGLKSATFAVKAPYMYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +DI   D+++D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQSRRQTSFAEVEVLPVVQTTDHIDIDENDVKVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +TH+PTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A  K   GS     
Sbjct: 264 LTHLPTGIVVTCQNEKSQLQNKASAMRVLQAKLLERKRQEERAELDAL-KGDGGS-SWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R  +       VL G +D  I   +    A 
Sbjct: 322 QMRSYVLHPYQMVKDLRTGVEDNNPSAVLDGELDKFIEAGIRWRMAD 368


>gi|314966526|gb|EFT10625.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA2]
          Length = 379

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 201/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++    EIE ++++   +       +L + +A +  ++S     DQ + 
Sbjct: 19  MSESAQQAIDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 78

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 79  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 131

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 132 SGEGGEESALFAADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYG 191

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   +IR+D  R+SG GG
Sbjct: 192 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEIRVDVYRSSGPGG 251

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+ TGI+V   +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 252 QGVNTTDSAVRLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 311

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 312 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 371

Query: 354 SASE 357
              E
Sbjct: 372 QRPE 375


>gi|254429259|ref|ZP_05042966.1| peptide chain release factor 2 [Alcanivorax sp. DG881]
 gi|196195428|gb|EDX90387.1| peptide chain release factor 2 [Alcanivorax sp. DG881]
          Length = 356

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 99/351 (28%), Positives = 173/351 (49%), Gaps = 22/351 (6%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+E  +      +       L +E A +  +++ I+   Q  ++   L  ++
Sbjct: 12  DQKSERLTEVERELENPDVWNDPDYARALGKERAQLEMVVNTINDASQGVEDTSALLDLV 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  + ++      +  +++ ++  ++ +  +     D  S  L+I+AG+GG+EA 
Sbjct: 72  VEEGDEDTLTEVE-----SDLRDLEKMVADLEFRRMFSGQMDACSAYLDIQAGSGGTEAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY R+     +K E++ +S  D  G K       G   +  ++ E+GVHR+ 
Sbjct: 127 DWGEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATIRFEGEYAYGWLRTETGVHRLV 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++V V PE  +          +R+DT RASG+GGQHVN TDSAVR
Sbjct: 187 RKSPFDSGGRRHTSFSSVFVSPEVDDDIDVDIDVGSMRVDTYRASGAGGQHVNRTDSAVR 246

Query: 246 ITHIPTG--------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKL 295
           +T+  T         +    S +SQHQN+ +A+K+++A++Y+VE +R   E+    + K 
Sbjct: 247 LTYEYTDEGGEKHTLVTQCQSGRSQHQNKDQALKMMQAKVYEVEMQRRNAEKQVQESNKS 306

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            IG G    +IR+Y    GRI D R  +  +  + VL G +D  I   L A
Sbjct: 307 DIGWG---SQIRSYVLDDGRIKDLRTGVESHNTQQVLDGALDQFIEASLKA 354


>gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521]
 gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521]
 gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 347

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 175/349 (50%), Gaps = 7/349 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M +  H     L+    E+E +M E    D   K  E       I  KI  YD+ K +  
Sbjct: 1   MKWGLHFDRAGLEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQLD 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  +      D        I+     K I     + N  +L     D  + I+ +  G 
Sbjct: 61  DIDVLKDIMEEDDIESANEIIQT---IKSIEHEIEDYNMKILLSGEYDKNNAIVTLHVGV 117

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG++A  +   L RMY R+   + + VE +     D+ G K +   ++G  V+  +K E 
Sbjct: 118 GGTDANDWTEMLLRMYTRWCENKGYSVETIDLIAGDEAGIKSVTLKVTGEYVYGYLKAEK 177

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           G+HR+ R+    A+G+  TS A++ VLPE   E D+ I  +D+++DT R+SGSGGQH+N 
Sbjct: 178 GIHRLVRISPYNANGKRQTSFASMEVLPELTKEQDITIRPDDLKVDTYRSSGSGGQHINK 237

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIPTGI+V   +E+SQ  NR  AM++L+++L +++ +R   E+  +   ++ 
Sbjct: 238 TDSAVRITHIPTGIVVQCQNERSQFSNRETAMEMLKSKLVELK-ERAHKEKIEDLTGELK 296

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                 +IR+Y F     + DHR N+    +  V+ G ID  IN  L  
Sbjct: 297 DMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFLKQ 345


>gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
 gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
          Length = 351

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 183/351 (52%), Gaps = 16/351 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +  L+   AE   RM+E    D   K        + +  K + Y     E+++L
Sbjct: 1   MGGLFDLETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEEL 60

Query: 63  HT---VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
                ++ + N +  +++L       ++K  +         LL  D  D  + I+E+  G
Sbjct: 61  DLLLEMVKEENDEELVKELDSKINPFLDKLDQ-----YELELLLSDPYDKNNAIIELHPG 115

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+E+  +   L RMY R+A  R +K+E L     D+ G K +   I G   +  +K E
Sbjct: 116 AGGTESQDWGNLLLRMYTRWAEKRGFKIETLDYQSGDEAGIKSVTLLIKGMNAYGYLKAE 175

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
            GVHR+ R+   +++GR HTS  ++ V+PE    +D+ I  +D+++DT RASG+GGQH+N
Sbjct: 176 KGVHRLVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKVDTYRASGAGGQHIN 235

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ- 296
           TTDSAVRITH+PTG++V + +++SQ +NR +AM +L+A+L+ +E +    E +A R  Q 
Sbjct: 236 TTDSAVRITHMPTGVVVASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAIRGEQL 295

Query: 297 -IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            IG G    +IR+Y F     + DHR N     +  V+ G ID  I   L 
Sbjct: 296 EIGWG---SQIRSYVFHPYSMVKDHRTNYETGNISQVMDGGIDPFIQAYLR 343


>gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102]
 gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102]
          Length = 367

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMAVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS ++V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEDGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
          Length = 375

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 182/346 (52%), Gaps = 6/346 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I  + N+  E+E + SE    +      +    I  + SK+  Y++   + +DL
Sbjct: 21  MGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDL 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            T+      + +   + +        +       +  L       D  + IL + AG GG
Sbjct: 81  ITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETL--LTGQYDKNNAILTLHAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +V  LFRMY R+A  + + V+VL   D ++ G K +   + G   +  +K E GV
Sbjct: 139 TEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +ASGR HTS A++ V+PE   +I+V I  +D+RIDT R+SG+GGQH+N T+
Sbjct: 199 HRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTE 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITHIPTGI+V   SE+SQ QN+  AMK+L+A+L +++ +    +    + +Q+   
Sbjct: 259 SAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLE-I 317

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y F     + DHR N     ++ V+ G +D  IN  L+
Sbjct: 318 AWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 363


>gi|317493835|ref|ZP_07952252.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918162|gb|EFV39504.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 320

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 102/324 (31%), Positives = 170/324 (52%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E +++  I++ I+   Q   +   L  +  + + +    +         
Sbjct: 3   NEPERAQALGKERSSLEEIVNTINQMTQGLDDVSGLLELAIEADDEETFNEAVVE----- 57

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
             ++     ++ +  +     D   C ++I+AG+GG+EA  +   L RM+ R+A  + +K
Sbjct: 58  LDQLDAKLAQLEFRRMFSGEYDSADCYIDIQAGSGGTEAQDWASMLLRMFLRWAEAKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  SD +  G K     ISG   +  ++ E+GVHR+ R    ++ GR HTS ++  V
Sbjct: 118 TEIIEESDGEVAGLKSATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFV 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE   +ID++I   D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+
Sbjct: 178 YPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AM+ L+A+LY+ E ++   E+    + K  IG G    +IR+Y     RI D R  
Sbjct: 238 NKDQAMRQLKAKLYEYEMQKKNAEKQVMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D  I   L A
Sbjct: 295 VETRNTQAVLDGDLDRFIEASLKA 318


>gi|304391525|ref|ZP_07373467.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
 gi|303295754|gb|EFL90112.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
          Length = 374

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 166/345 (48%), Gaps = 15/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+     +    +   K   L +E   +   I+ I+  +    + +DL  + 
Sbjct: 26  EKANTRLEELNAASEDPDLWNDPGKAQLLMKERQQLETGITSINGLEGDLGDTKDLIELA 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              +    + +             +          L     D      E+ +G GG+E+ 
Sbjct: 86  EMEDDADVLAEAESALRELHADLGK-----RQAATLLSGEADANDTYFEVHSGAGGTESN 140

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    +KVEV +++  D+ G K     + G   +  MK ESGVHR+ 
Sbjct: 141 DWANMLLRMYIRWAETNGYKVEVQATTSGDEAGIKAATVLVKGANAYGYMKTESGVHRLV 200

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   ++  + HTS ++V V P     I++ +P  +IR+DT R+SG+GGQHVNTTDSAVR
Sbjct: 201 RISPYDSQAKRHTSFSSVWVYPVIDDNIEIIVPDNEIRLDTFRSSGAGGQHVNTTDSAVR 260

Query: 246 ITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRS 303
           ITHIPTGI+VTSSEKSQHQNR  AMK L++RLY+ E ++     + +   K  IG G   
Sbjct: 261 ITHIPTGIVVTSSEKSQHQNRANAMKALKSRLYEAEMQKRNEATQAAHEAKSDIGWG--- 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y     + + D R  +       VL G ++  +   L   
Sbjct: 318 HQIRSYVLQPYQLVKDLRTGVESTNPSAVLDGDLNAFMEAALAHQ 362


>gi|109897685|ref|YP_660940.1| peptide chain release factor 2 [Pseudoalteromonas atlantica T6c]
 gi|109699966|gb|ABG39886.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudoalteromonas
           atlantica T6c]
          Length = 348

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 168/343 (48%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   +      +       L +E  A+  ++  I   +Q   E ++L   +
Sbjct: 11  DQKNERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGCVEVEELLE-L 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               SD E  D A+ ++  +   +  LE    +  +    +D     ++I++G+GG+EA 
Sbjct: 70  AVEESDQETLDEAEKDLAELVSRLETLE----FRRMFSGPNDANDGYIDIQSGSGGTEAQ 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+     +K E++  SD D  G K       G   F  ++ E+GVHR+ 
Sbjct: 126 DWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETGVHRLV 185

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V   PE  +         D+RIDT RASG+GGQHVN TDSAVR
Sbjct: 186 RKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRTDSAVR 245

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH PT I+V   +++SQH+N+ +AMK L+A+LY+ E ++   E+    + K  IG G  
Sbjct: 246 ITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQTMEDSKSDIGWG-- 303

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 304 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIQASLK 345


>gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21]
 gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 371

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 179/343 (52%), Gaps = 11/343 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + D K R  E+E   S     +      +   + + +   ++I++   ++ +D+  +I  
Sbjct: 25  VDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIWESLDKQARDIQELIEL 84

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + + +  +    EV A+  ++    ++  +  +     D     + I +G GG+E+  +
Sbjct: 85  GSEEQD--EATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSINSGAGGTESQDW 142

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RY   + WK E+    + D  G K +   ++G   +  +K E+G+HR+ R+
Sbjct: 143 AEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYLKAEAGIHRLVRI 202

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIP--LEDIRIDTMRASGSGGQHVNTTDSAVRI 246
              ++S R HTS A+  V P   E D++I     D+RIDT R+SG+GGQHVNTTDSA+RI
Sbjct: 203 SPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSSGAGGQHVNTTDSAIRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           THIPTG +V   SE+SQH N+  AMKVLR++LY++E +    + S     K +IG G   
Sbjct: 263 THIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAGEKKEIGWG--- 319

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y       + D R  +   K + VL G +DD + P L 
Sbjct: 320 SQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFVVPYLM 362


>gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756]
 gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 373

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +  E+  R+ +    D       ++ E AA++  +  +   ++  ++  +   +     
Sbjct: 30  RKLDELNARVEDPTLWDRPSEAQAVSRERAALAAKVEAVQSIERDLKDAVEYAELADMEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  + D          K +++         L     D     +EI +G GG+E+  + G
Sbjct: 90  DEESLNDAR-----VQLKALKDRAGRAELEALLSGEADGNDAYIEINSGAGGTESCDWAG 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A     + E++  +D D  G K     + G   +  +K E+GVHR+ R+  
Sbjct: 145 ILLRMYTRWANAHGMQTELIEETDGDQAGIKSATLLVKGPNAYGWLKTEAGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS A+  V P     I+++I   D+R DT RASG+GGQH+N TDSAVR+THI
Sbjct: 205 YDSSARRHTSFASAWVYPVVDDTIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHI 264

Query: 250 PTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI +   + +SQHQNR  A K+LRARLY+ E ++    +    ++K  IG G    +I
Sbjct: 265 PTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R N+     + VL G +D  +   L   
Sbjct: 322 RSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGAALAQR 363


>gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 378

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 171/344 (49%), Gaps = 6/344 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + + + R  E++  M E        +          + +++  Y   KQ   D+  +I 
Sbjct: 26  DLENKRKRILELDRMMEEPDFWTDPERANRLSTENHHLKNELESYQSLKQSYDDIGALIE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 E  +    E+  +  E  E  + ++  LL     D  + IL + AG GG+EA  
Sbjct: 86  M--GVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLSGEYDAMNAILRLNAGAGGTEAND 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L+RMY R+A  R + +++L   + ++ G K +   I G   +  ++ ESG+HR+ R
Sbjct: 144 WAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVTMEIDGDYAYGYLRSESGIHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A G+  TS  +  V+P+   +IDVDI  EDI+++  R+SG+GGQH+N T SAVR+
Sbjct: 204 ISPFNAQGKRQTSFVSCDVMPDIETDIDVDIREEDIKMEVFRSSGAGGQHINKTSSAVRL 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG +V    E+SQ QNR +AM++L+A+LY  E++    + +  R  ++       +
Sbjct: 264 IHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKEKEEQEAKLAGIR-GEVKDNGWGSQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           IR+Y     R + D R        + VL G ID  I   L   Q
Sbjct: 323 IRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITAYLKWVQ 366


>gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
           NRL30031/H210]
 gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
 gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
           NRL30031/H210]
 gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
          Length = 367

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNIATGIEDNRMLIEMAVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS ++V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|40063231|gb|AAR38058.1| peptide chain release factor 2 [uncultured marine bacterium 577]
          Length = 359

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  EI     +           +L  E   +  I+  +     + Q+  DL  + 
Sbjct: 22  DAKKERSDEISFLEEDPEIWKDSKRAQELGREKKILDKIVLTLETIKLQLQDSIDLFQMA 81

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N       +    + A   ++      + +  +  +  D  +C LEI++G+GG+EA 
Sbjct: 82  KEEND-----IVVLESIRADAAKLETNVANMEFCNMFSNPMDPNNCFLEIQSGSGGTEAQ 136

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RY   R +KVEVL  S  +  G K     ISG   +  ++ ESG+HR+ 
Sbjct: 137 DWAAMLERMYLRYCERRDYKVEVLEESSGEVAGIKSASLKISGDYAYGYLRTESGIHRLV 196

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS A+V + PE    I+++I   D+R+DT RASG+GGQH+N TDSA+R
Sbjct: 197 RKSPFDSGSRRHTSFASVFIYPEVDDTIEIEINPADLRVDTYRASGAGGQHINKTDSAIR 256

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH P+GI+V   +++SQH+NR  AM +L++RLY+VE ++ ++E+    + K  IG G  
Sbjct: 257 ITHNPSGIVVSCQNDRSQHRNRAEAMAMLKSRLYEVELRKQSDEKQAMEDSKTDIGWG-- 314

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R  L +   + VL G +D+ I   L  
Sbjct: 315 -HQIRSYVLDQSRIKDLRTGLEIGNTQGVLDGGLDEFIKTSLKQ 357


>gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
 gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
          Length = 368

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 105/350 (30%), Positives = 172/350 (49%), Gaps = 12/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEE 59
                +I   + + AE+E +M E    D      KL +E A +   +        K ++ 
Sbjct: 19  MRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDLVAKYEDA 78

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + L+ + G   +D+ +    + E+  I + +  L       +L     D    IL + AG
Sbjct: 79  ETLYEM-GIEENDASMEADIRAELTLISEGLETL----QLEVLLSGEYDANDAILTLHAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+EA  +   L RMY R+A    + V+       D+ G K     I G   +  +K E
Sbjct: 134 AGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGDEAGVKSATLFIKGHNAYGFLKSE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVN 238
            GVHR+ R+   ++  R HTS +   V+PE  +       ++D+R+D  RASG+GGQH+N
Sbjct: 194 KGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYFRASGAGGQHIN 253

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T SAVR+TH PTGI+V   +E+SQ QN+ + +K+LRA+L+++E+++   E +    +Q 
Sbjct: 254 KTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIARLEGVQQ 313

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +   +IR+Y F     + D R N     ++ V+ G ID  I   L A
Sbjct: 314 K-IEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAYLNA 362


>gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 330

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 114/330 (34%), Positives = 173/330 (52%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS+        K   L ++  A+  ++ + +    K ++   L  +  D   +S   ++ 
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLDEGDESITDEVD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +K        +    L     D  + IL I AG+GG+EA  +   L RMY R+
Sbjct: 61  KEYKELKKKLED-----LKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + ++VE L     ++ G K +   I G   +  +K E+GVHR+ R+   +A+GR HT
Sbjct: 116 ANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V VLPE   +I+V+I  ED++IDT RASG+GGQ+VN T+SAVRITH+PTGI+V   
Sbjct: 176 SFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           SE+SQ QNR  AMK+L+A+L D+  K    +     K +        +IR+Y F     +
Sbjct: 236 SERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEHREAAWGNQIRSYVFQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N  +  ++ V+ G ID  IN  L  
Sbjct: 295 KDHRTNYEVGNVQAVMDGEIDGFINAYLKQ 324


>gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101]
          Length = 364

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 174/340 (51%), Gaps = 9/340 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG- 67
           +  L+ + AE+EL+M E+   D   K  E       +  KI  +    +   D+  +   
Sbjct: 28  LASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL 87

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              +D E       EV A+ KEI  L        +     D  + IL +  G GGS+A  
Sbjct: 88  MEENDEETAKEIISEVKALSKEIDTL----KIETILSGEYDRNNAILTLHTGVGGSDAND 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + + +E +     D+ G K +   + G   +  +K E G+HR+ R
Sbjct: 144 WTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T+SAVRI
Sbjct: 204 ISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQ  NR  AM +L+++L +++ +R   E+  +   ++       +
Sbjct: 264 THIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKDMGWGSQ 322

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           IR+Y F     + DHR N+    +  V+ G ID+ I   L
Sbjct: 323 IRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362


>gi|162447197|ref|YP_001620329.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
 gi|189039998|sp|A9NF23|RF2_ACHLI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|161985304|gb|ABX80953.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
          Length = 365

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 186/348 (53%), Gaps = 12/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  + NR  EIE  M+     +   +  +    ++ +  K       + + +D    + 
Sbjct: 25  DLDAINNRLKEIEPIMANPNFWNDSNQAKKISQELNQLTEKKQTITSIQNQYEDALMWLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +    +E  D+ + E+ +++K+I E E      +L     D  + ILE+  G GG+E+  
Sbjct: 85  EAKEGTESWDILEAEIDSLQKKISEFE----IEVLLNGEYDHNNAILELHPGAGGTESMD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L RMYER+A  + +KVE+L+    ++ G K +   ISG   +  +K E GVHR+ R
Sbjct: 141 WCGILMRMYERFAGYKGYKVEILNYLAGEEAGVKSVTLRISGPYAYGNLKSERGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +  V        +V++  +DIR+DT ++SG+GGQ VNTT SAVR+
Sbjct: 201 ISPFDSNKRRHTSFVSCDVAPEIDETSEVELKDDDIRMDTFQSSGAGGQSVNTTYSAVRL 260

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+V   +E+SQ +N+  AM++L+++L   E +    + +A +  K  IG G   
Sbjct: 261 THIPTGIVVNIQNERSQIKNKEAAMQILKSKLIQKELEEKQAKLNALKGEKSDIGWG--- 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            +IR+Y F   + + DHR N  +  ++ V+ G ID  IN  L +   +
Sbjct: 318 SQIRSYVFQPYQMVKDHRTNYEVGNIQSVMDGDIDGFINAYLKSKAYE 365


>gi|303241850|ref|ZP_07328345.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
 gi|302590625|gb|EFL60378.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
          Length = 340

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 180/340 (52%), Gaps = 10/340 (2%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDS 73
             E+E + SE    +      +    I  +  K+  Y++  QE +D  T+  +G    D 
Sbjct: 5   IEELEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLEEDDE 64

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            +    +      +K+  EL        L     D  + IL + AG GG+EA  +V  L 
Sbjct: 65  SVFTEVEDSFKKFKKDFEEL----RLETLLIGPYDKNNAILTLHAGAGGTEAQDWVQMLL 120

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RM+ R+   + + V +L   D ++ G K +   + G   +  +K E GVHR+ R+   +A
Sbjct: 121 RMFTRWGESKGFTVRILDYLDGEEAGIKSVTINVIGENAYGYLKSEKGVHRLVRISPFDA 180

Query: 194 SGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           SGR HTS A+  V+PE + +++V+I  +D+RIDT RASG+GGQH+N T+SA+RITHIPTG
Sbjct: 181 SGRRHTSFASCDVMPELSDDVEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHIPTG 240

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           ++V   +E+SQ QN+  AM++L+++L +++ +    +    + +Q+       +IR+Y F
Sbjct: 241 VVVACQTERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDLKGIQM-DIAWGSQIRSYVF 299

Query: 312 SQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
                + DHR N     ++ V+ G +D  IN  L    ++
Sbjct: 300 CPYTLVKDHRTNYEQINVDNVMDGDLDGFINSYLVFSNSE 339


>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
 gi|166225119|sp|A5IM04|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
           petrophila RKU-1]
          Length = 367

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 105/336 (31%), Positives = 177/336 (52%), Gaps = 8/336 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++     EIE ++++    D   K  E    +  + +      + +   +DL   I   
Sbjct: 27  NEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIELS 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           + D E+    +  V  +E  +++LE      ++     D  +  L +  G GG+E+  + 
Sbjct: 87  DEDQEMAQHVEEIVQELEGAVKKLEL----EIILNGKYDPNNAYLSVHPGAGGTESQDWA 142

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + + VE++     ++ G K+    I G   +  +K ESGVHR+ R+ 
Sbjct: 143 QMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRIS 202

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ R HTS A+V V+PE  +  D++I  ED++I+T RASG GGQ+VN T+SAVRITH
Sbjct: 203 PFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITH 262

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQHQN+  A+K+L+A+LY +E ++   E     + ++       +IR
Sbjct: 263 LPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEI-QGELKDISWGNQIR 321

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINP 342
           +Y F     + DHR  +    ++ V+ G ID  I  
Sbjct: 322 SYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEA 357


>gi|94984716|ref|YP_604080.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300]
 gi|119361533|sp|Q1J0S3|RF1_DEIGD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94554997|gb|ABF44911.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300]
          Length = 370

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 138/362 (38%), Positives = 211/362 (58%), Gaps = 14/362 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
            +S  ++ +L   F  +E  + +   +     Y +LT  +  ++PI++    +     + 
Sbjct: 1   MVSQ-RLEELAAEFGLVERALGDPAMLADPREYARLTRRHRELTPIVTLYREHAVLSSDL 59

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +    ++     D ++R+LAQ E+ ++   + ++E E+  LLLP D DD K+ ILE+RAG
Sbjct: 60  EGARELLA----DPDMRELAQGEIESLSARLAQIEAELEVLLLPTDPDDAKNVILELRAG 115

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+EAALF  DL RMY RYA     K+ VL +S++D GG  ++VA ++G   F   K+E
Sbjct: 116 AGGAEAALFAVDLLRMYTRYAEGAGLKLNVLDASESDLGGASKVVAEVTGEFAFRAFKWE 175

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
            GVHRVQRVPATE+ GR+HTS  TVAVLPEA + +V +   ++RID  R+ G+GGQ VNT
Sbjct: 176 RGVHRVQRVPATESQGRIHTSTVTVAVLPEAEQGEVSVDPSEVRIDVFRSQGAGGQGVNT 235

Query: 240 TDSAVRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           TDSAVR  + P      ++V    +SQ +NR +A+ VL +RL + ER          R  
Sbjct: 236 TDSAVRAVYRPGTPDEIVVVCQDSRSQIKNREKALVVLASRLAERERAAREERERETRAA 295

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYK--LEYVLQGYIDDIINPLLTAHQAKMIG 353
           Q+G+G+RSE+IRTYN+ Q R+TDHR+        L+ V+ G +  I+  L    + + + 
Sbjct: 296 QVGTGERSEKIRTYNYPQNRVTDHRLEGDAKNFALDSVMAGGLAPIVAALSRDERERQLL 355

Query: 354 SA 355
             
Sbjct: 356 EL 357


>gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
 gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
          Length = 328

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 104/328 (31%), Positives = 176/328 (53%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    +   +  +     +    K   ++Q   E ++L  +      D +  +  Q E
Sbjct: 1   MADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYELQQVDFD--EAIQTE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           ++   K++ +        LL     D  + I+E   G GG+E+  +   L RMY R+A  
Sbjct: 59  LIQRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAES 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +++EVL     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 119 RNFQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFC 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V ++PE    I++DI  +D+++DT RASG+GGQH+N T+SAVRITHIPT  +V + +++
Sbjct: 179 SVDIMPELDETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ +NR +AMK L+++LY +E ++ A E +  R  Q+  G    +IR+Y F     + DH
Sbjct: 239 SQLKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIG-WGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N+    ++ V+ G ID+ I+  L   
Sbjct: 298 RTNMETGNVQAVMDGEIDNFIDAYLKWQ 325


>gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus
           propionicus DSM 2032]
          Length = 369

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 114/354 (32%), Positives = 180/354 (50%), Gaps = 14/354 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +V   H  +   + +   +E +       D   +       +  +   I ++++   + +
Sbjct: 22  LVLKEHLDLDGKREQVELLERQTVSPNFWDNQSEAKRVQRQLGQLQDLIGVWEKNFGDLE 81

Query: 61  DLHTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
           D   ++      +D +        +  + + +  +E E           D  + IL I A
Sbjct: 82  DAEMLLDMAREENDQDTYQEVVSGLDDLRRRVELVELECM----FSGEHDANNAILTIHA 137

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG+EA  +VG L RMY R+A  + +K ++L     D+ G K +   + G+  +  ++ 
Sbjct: 138 GAGGTEAQDWVGILLRMYLRWAESKGFKADILDLLPGDEAGTKSVTIMVKGKYAYGYLRS 197

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           E G+HR+ R+   +ASGR HTS A+V V+PE   +++++I  +DIRIDT RASGSGGQHV
Sbjct: 198 EVGIHRLVRISPFDASGRRHTSFASVMVMPELDDDVEIEINDKDIRIDTYRASGSGGQHV 257

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA--NERSANRK 294
           N TDSA+RITH PTGI+V   +E+SQH N+  AMK+L ARLY+ E++      E     K
Sbjct: 258 NKTDSAIRITHFPTGIVVQCQNERSQHSNKATAMKMLMARLYEREKEEQQRTQENIQGDK 317

Query: 295 LQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +I  G    +IR+Y     R I DHR N     ++ VL G +D  I   L   
Sbjct: 318 KEIAWG---SQIRSYVLQPYRLIKDHRTNTEEGNVDAVLDGRLDPFIKAYLLWQ 368


>gi|315092115|gb|EFT64091.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA4]
          Length = 379

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 202/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++    EIE ++++   +       +L + +A +  ++S     DQ + 
Sbjct: 19  MSESAQQAIDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 78

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 79  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 131

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 132 SGEGGEESALFAADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYG 191

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   +IR+D  R+SG GG
Sbjct: 192 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEIRVDVYRSSGPGG 251

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+ TGI+V   +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 252 QGVNTTDSAVRLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 311

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNFSQ R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 312 RDQVRTVDRSARVRTYNFSQNRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 371

Query: 354 SASE 357
              E
Sbjct: 372 QRPE 375


>gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580]
 gi|52787452|ref|YP_093281.1| hypothetical protein BLi03772 [Bacillus licheniformis ATCC 14580]
 gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
 gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580]
 gi|52349954|gb|AAU42588.1| PrfB [Bacillus licheniformis ATCC 14580]
 gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
          Length = 327

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 111/328 (33%), Positives = 168/328 (51%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++        K        + +   ++ Y    +  ++L         D +     ++ 
Sbjct: 1   MADPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKEDPDQDLQNELV 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                   +  E E+  L    +  D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 61  NELKSLTKQFNEFELQLL--LSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  E  D++I  EDI++DT RASG+GGQHVNTTDSAVRITH+PTG++V   +E+
Sbjct: 179 SCDVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR RAMK+L+++LY    +    +    R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWG---SQIRSYVFHPYSLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 296 DHRTNTEMGNVQAVMDGDIDSFIDAYLR 323


>gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
 gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
          Length = 367

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 173/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K R  E+     +    +   +     +E   +  I+  +   +    + ++L  ++ +
Sbjct: 32  KKERLEEVVGLSEDPELWNDPKRAQDIGKERKLLEGIVLTLENIENGIADNRELIDMVVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N      +     ++A    + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  END-----EDGFAAIVADVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G L RMY RYA  + +KVEV+   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLLRMYLRYAERKGFKVEVVEQDDGEIAGINNATIRLEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE     +V+I   D+R DT RASG+GGQH+N TDSAVR+T
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTYRASGAGGQHINKTDSAVRMT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           HIPTGI+V + + +SQH+NR    ++LRA+L+++E ++   E+ A    K  +G G    
Sbjct: 267 HIPTGIVVQSQNSRSQHENRRVCEEMLRAKLFELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|326692249|ref|ZP_08229254.1| peptide chain release factor 2 [Leuconostoc argentinum KCTC 3773]
          Length = 333

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 104/328 (31%), Positives = 181/328 (55%), Gaps = 5/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+ES   D  +K  +     + + ++   +     + +++  +I   + D E  D A   
Sbjct: 1   MTESGFWDDNVKAQKVIEENNILKNRRDSFLNLTNQAEEIAVLIEMLSEDPEDEDTAAEL 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
             ++EK  +++E      LL +  D + + ILE+  G+GG+E+  +  +L+RMY R+A  
Sbjct: 61  AASVEKVQKDVEAYNLEQLLTEPYDAN-NAILEVHPGSGGTESTDWGANLYRMYTRWAQQ 119

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++VEVL     D+ G       ISG   +  ++ E GVHR  R+   +++GR HTS  
Sbjct: 120 HGFQVEVLDYHAGDEAGIDSATIKISGHNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFV 179

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V++  +DI++D  R+ G+GGQ+VN   + VR+TH PTGI+V+S+ E+
Sbjct: 180 SVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSSTVER 239

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDH 319
           +Q+ NR  AM++L+ +LY +E ++ A ER+A    ++ +G    +IR+Y     + + DH
Sbjct: 240 TQYGNRDYAMRLLKGKLYQLELEKQAAERAALTGEKMENG-WGSQIRSYVLHPYQMVKDH 298

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N    + + VL G +D  IN  L   
Sbjct: 299 RTNYETNQPQQVLDGDLDPFINAYLQWQ 326


>gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.]
          Length = 344

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 189/350 (54%), Gaps = 16/350 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
            + + + R  EIE  +S+    + + K T   +E   IS  +       +  +E + L++
Sbjct: 3   DLDNKEKRLNEIEFLISKDNFWENHDKATPLLKERTFISGKVESFKSLLKDLEECEILYS 62

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + +    I +++       EK  +     ++ LL+    DD  + I+ I AG GG+E
Sbjct: 63  LAIEESDSKTIEEVSVQIQKLKEKINK-----LSLLLMLDGEDDINNAIVSINAGAGGTE 117

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   LFRMY R+   + +K  ++     D+ G K +  T+ G   +  +K E GVHR
Sbjct: 118 AQDWSEILFRMYSRWIEKKGFKSTIIDFQPGDEAGIKSVTITVEGDYAYGYLKTEIGVHR 177

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    A+G+ HTS A+V V PE    I++DI  +D+RID  R+SG+GGQHVN T SA
Sbjct: 178 LVRISPFNANGKRHTSFASVFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSA 237

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           +RITH+PTGI+V    E+SQH+N+  AM VL++RLY +E+++  ++       K +I  G
Sbjct: 238 IRITHLPTGIVVQCQQERSQHKNKDMAMSVLKSRLYQLEKQKQDDKMQEIHDGKDEIAWG 297

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +   +IR+Y     + I DHRINL       VL G ID  I  +L + +A
Sbjct: 298 N---QIRSYVLHPYQLIKDHRINLETGNAAAVLDGAIDPFIEGVLLSRKA 344


>gi|254487153|ref|ZP_05100358.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
 gi|214044022|gb|EEB84660.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
          Length = 374

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 118/333 (35%), Positives = 174/333 (52%), Gaps = 5/333 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  I+ Y+  KQE  D   +I     +++
Sbjct: 31  RLEEFNARVEDPNLWDDPDAAQKLMRERQALVDSIATYEGIKQELADHVELIEMGEMEND 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +A+ E           + E+  LL  +   +     LEI AG GG+E+  +   L R
Sbjct: 91  AEVVAEAEAALKALAETAAQKELEALLDGEADSN--DTFLEINAGAGGTESCDWANILAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSESAGEEAGIKSATYKISGLNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS ++V V P     I++D+   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHHPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R     +   + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHENK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + + D R N      + VL G +D ++   L 
Sbjct: 328 YQMVKDLRTNFETSDTKGVLDGDLDGLMGAALA 360


>gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114]
 gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114]
          Length = 367

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNIATGIEDNRMLIEMAVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS ++V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
 gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
          Length = 340

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 178/341 (52%), Gaps = 12/341 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT---VIGD 68
           ++   AE E RM+E    D      +     +        + +   E ++L     +I +
Sbjct: 1   MEEDIAEAENRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D   ++LA      + K            +L     D  + I+E+  G GG+E+  +
Sbjct: 61  EPDDEMEQELATRASELLGKMSA-----YELAMLLDGPYDHNNAIIELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R+A  R ++VE L     D+ G K +   I GR  F  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYQRWADKRGFQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ R HTS  +V V+PE    ID++I  +D++IDT RASG+GGQH+N T+SAVRIT
Sbjct: 176 SPFDSANRRHTSFCSVDVMPELDDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRIT 235

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG +V + +++SQ +NR +AM +L+A+LY +E ++   E +A R  Q+  G    +I
Sbjct: 236 HIPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIG-WGSQI 294

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y F     + DHR N     ++ V+ G ID  I+  L  
Sbjct: 295 RSYVFHPYSMVKDHRTNFETGNVQAVMDGDIDGFIDAYLKQ 335


>gi|312796706|ref|YP_004029628.1| peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI
           454]
 gi|312168481|emb|CBW75484.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Burkholderia
           rhizoxinica HKI 454]
          Length = 320

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 105/321 (32%), Positives = 170/321 (52%), Gaps = 12/321 (3%)

Query: 30  DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKE 89
                L  E   +  ++  +S  +    + Q+L  +  +   D  +    +       + 
Sbjct: 6   KQAQALGREKKLLDAVVQMLSALNGDLTDTQELFELASEEQDDDTLLACERD-----VQA 60

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           +     +I +  +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EV
Sbjct: 61  LERRVADIEFRRMFNNPADPNNCFVDIQAGAGGTEAQDWASMLLRQYLRYCERKGFKAEV 120

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           L  SD +  G K     + G   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE
Sbjct: 121 LEQSDGEVAGIKNATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPE 180

Query: 210 AAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
             E  D+D+   D+RIDT RASG+GGQH+N TDSAVRITH+P+GI+V   +++SQH+NR 
Sbjct: 181 VDESIDIDVNPADLRIDTFRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDRSQHRNRA 240

Query: 268 RAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
            AM +L++RLY+ E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +
Sbjct: 241 EAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEI 297

Query: 326 YKLEYVLQGYIDDIINPLLTA 346
                VL G +DD I+  L  
Sbjct: 298 SNTRAVLDGDLDDFISASLKQ 318


>gi|227356361|ref|ZP_03840749.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
 gi|227163471|gb|EEI48392.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
          Length = 320

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 109/324 (33%), Positives = 176/324 (54%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E +++  I+  I   +Q  ++   L  +  +   D E  + A  E+  +
Sbjct: 3   NEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEA-DDEETFNEAVAELEGL 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
            K++ +LE    +  +     D   C L+++AG+GG+EA  +   L RMY R+A  R +K
Sbjct: 62  NKKLEQLE----FRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  SD D  G K     I G   +  ++ E+GVHR+ R    ++ GR HTS ++  V
Sbjct: 118 TEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFV 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE    ID++I   D+RID  RASG+GGQHVN T+SAVRITH+PTG++    +++SQH+
Sbjct: 178 YPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLVTQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AMK ++A+LY++E ++   ++    + K  IG G    +IR+Y     RI D R  
Sbjct: 238 NKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D  I   L A
Sbjct: 295 VETRNTQAVLDGDLDKFIEASLKA 318


>gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
 gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
          Length = 329

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 15/334 (4%)

Query: 20  ELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
           EL ++ES   D       L  E +++  ++  I   D    +  +L  +  + N +S + 
Sbjct: 2   ELELAESSVWDNPERAQALGRERSSLEIVVKTIESLDSGVADCGELLDMAVEENDESMVA 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D+      A    + +    + +  +     D  +  L+I++G+GG+EA  +   + RMY
Sbjct: 62  DVQ-----AEIDRLEKELGVLEFRRMFSGETDPNNAYLDIQSGSGGTEAQDWAEMVLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+   + +KV +   S  +  G K       G   F  ++ E+GVHR+ R    ++  R
Sbjct: 117 LRWGEAKGFKVTLEECSAGEVAGIKSATIYFEGEYAFGWLRTETGVHRLVRKSPFDSGNR 176

Query: 197 VHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS  +V V PE  +  +++I   D+RIDT RASG+GGQHVN TDSA+RITHIP+GI+V
Sbjct: 177 RHTSFCSVFVSPEIDDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGIVV 236

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFS 312
              +E+SQH NR +A K+LRAR+Y+ E  +   E+    + K  IG G    +IR+Y   
Sbjct: 237 QCQNERSQHANRDKAYKMLRARMYEQEMLKRNAEKQAMEDSKSDIGWG---SQIRSYVLD 293

Query: 313 QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             R+ D R  +     + VL G +D  I   L A
Sbjct: 294 DSRVKDLRTGVQTSNTQAVLDGDLDQFIVESLKA 327


>gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
          Length = 330

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 113/330 (34%), Positives = 173/330 (52%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS+        K   L ++  A+  ++ + +    K ++   L  +  +   +S   ++ 
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +K        +    L     D  + IL I AG+GG+EA  +   L RMY R+
Sbjct: 61  KEYKELKKKLED-----LKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + ++VE L     ++ G K +   I G   +  +K E+GVHR+ R+   +A+GR HT
Sbjct: 116 ANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V VLPE   +I+V+I  ED++IDT RASG+GGQ+VN T+SAVRITH+PTGI+V   
Sbjct: 176 SFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           SE+SQ QNR  AMK+L+A+L D+  K    +     K +        +IR+Y F     +
Sbjct: 236 SERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEHREAAWGNQIRSYVFQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N  +  ++ V+ G ID  IN  L  
Sbjct: 295 KDHRTNYEVGNVQAVMDGEIDGFINAYLKQ 324


>gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
           14600]
 gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
           14600]
          Length = 379

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +     +  E+   M      +      +  +E  ++   +          +E   L  
Sbjct: 27  DLESKHQKIEELNREMEAPDFWNDADLSARKMKELKSLKDDVEIADKLKNSIEEIGMLMD 86

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + +    + ++  +     E         +    L     D  + I+ + AG GG+E
Sbjct: 87  MANEEDDADMVGEIRLMMDQMKEDF-----ERVRIKTLLSGEFDANNAIVTLHAGAGGTE 141

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L+RMY R+AA + ++VE L   D D+ G K +   ++G   +  +K E GVHR
Sbjct: 142 ACDWTAMLYRMYTRWAAAQGFEVEELDYLDGDEAGIKAVTFQVNGENAYGYLKSEKGVHR 201

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    A+G+  TS ++  V+PE   ++DV++  EDIRIDT R+SG+GGQH+N T SA
Sbjct: 202 LVRISPFNANGKRQTSFSSCDVMPELEQDLDVEVKDEDIRIDTYRSSGAGGQHINKTSSA 261

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH PTGI+V   +E+SQH N+ +AM++L+A+LY ++ +    +    R  ++     
Sbjct: 262 IRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKMEEQKAKAEGIR-GEVTDIAW 320

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y F     + D R       +  V+ G I+  IN  L  
Sbjct: 321 GNQIRSYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAYLRW 365


>gi|289435770|ref|YP_003465642.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172014|emb|CBH28560.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 327

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M +    +      +     +        +   ++E++ +     ++ +   +    +L 
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     +              L+  D  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  KDITAYMATINA-----FELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 SEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+THIP+GI+V   
Sbjct: 176 SFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQLKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 325


>gi|126726324|ref|ZP_01742165.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
 gi|126704187|gb|EBA03279.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
          Length = 375

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 9/347 (2%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSD 72
           R  E      +    +   K  +       ++   + Y++  Q+  D   +I   +   D
Sbjct: 31  RLEEFNALTEDPNLWNDPEKAQKLMRDRQLLLDAYNNYNKLAQDLADNVELIELGEMEDD 90

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            ++   A+  + ++ +   + E       L     D     LEI +G GG+E+  +   L
Sbjct: 91  EDVVAEAEAGLRSVVEIAAKKEL----EALLNGEADSNDTFLEINSGAGGTESCDWANML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  R +KVE+ S +  ++ G K     ISG   +  +K ESGVHR+ R+   +
Sbjct: 147 ARMYVRWAEARGYKVELQSETAGEEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPFD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ + HTS +++ V P     ID+++   DIRIDT R+SG+GGQHVNTTDSAVRITH PT
Sbjct: 207 SAAKRHTSFSSIWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHHPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSSEKSQHQNR  AMK L++RLY +E  R     +   + + G      +IR+Y  
Sbjct: 267 GIVVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHENK-GDAGWGNQIRSYVL 325

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
              + + D R N+     + VL G +D  +   L  + A    + ++
Sbjct: 326 QPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLALNVAGKSRAEAQ 372


>gi|325291337|ref|YP_004267518.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 371

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 118/374 (31%), Positives = 194/374 (51%), Gaps = 26/374 (6%)

Query: 1   MVFLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISP 44
           M+    K+I +L  R A++                E  ++     D      +    ++ 
Sbjct: 1   MLADWKKEIENLVARLADLRVSLDVPAREVKIGQLEEELNRPDFWDDRSNAQKIMQELTG 60

Query: 45  IISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
              K++++ + K E +DL  +  +     DS + D    ++  I  +  ELE      +L
Sbjct: 61  NKDKVALFGELKTETEDLEVLWQMAMEEDDSSLEDEIVKDIHRIRAQYDELEL----EIL 116

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D  + I+ + +G GG+EA  +V  L+RMY R+   R++KVE L     ++ G K 
Sbjct: 117 LSGEYDRNNAIITLHSGAGGTEAQDWVQMLYRMYLRWGERRRYKVETLDLLPGEEAGIKS 176

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLED 221
           +  +++G   F   K E GVHR+ R+   ++SGR HTS A+V V+PE   +++++I  ED
Sbjct: 177 VTFSLAGENAFGYAKCEKGVHRLVRISPFDSSGRRHTSFASVDVIPEVNEDMEINIDSED 236

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +++DT R+ G+GGQHVN TDSAVRITHIP+GI+V   SE+SQ QNR   M++L+A+L ++
Sbjct: 237 LKVDTYRSGGAGGQHVNKTDSAVRITHIPSGIIVQCQSERSQIQNRAYCMRILQAKLLEL 296

Query: 281 ERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDI 339
           +RK+   E    R  ++       +IR+Y F     + DHR N     +  V+ G ID  
Sbjct: 297 KRKQQEEELLEIR-GELNDIAWGSQIRSYVFHPYSMVKDHRTNTETGNVNSVMDGEIDLF 355

Query: 340 INPLLTAHQAKMIG 353
           I+  L  +  K + 
Sbjct: 356 ISAYLKQNARKAVA 369


>gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
 gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
          Length = 373

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 165/342 (48%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    D   +      E   +S  +  ++   ++ Q+  D   +     
Sbjct: 30  RRLDELNARVEDPTLWDKPEEAQSVMRERTKLSGGVDAVNSLTKELQDALDYAELADMEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  + +       A+ K I+E         L     D     +EI +G GG+E+  + G
Sbjct: 90  DEELLEEAR-----AMLKAIKEKAARAELEALLSGEADGNDAYVEINSGAGGTESCDWAG 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A      V +   +  +  G K     + G   +  +K E+GVHR+ R+  
Sbjct: 145 ILLRMYTRWATQHGMTVSIEEETPGEQAGIKSATIMVKGTNAYGWLKTEAGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS A+V V P   +   +DI   D+R DT RASG+GGQHVN TDSAVR+THI
Sbjct: 205 FDSNARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHVNKTDSAVRLTHI 264

Query: 250 PTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
           PTGI +   + +SQH NR  A K+LRARLY++E ++    ++   ++K  IG G    +I
Sbjct: 265 PTGIAVACQAGRSQHANRDEAWKMLRARLYELELQKREAAQAALEDQKTDIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R ++     + VL G +D  +   L   
Sbjct: 322 RSYVLQPYQMVKDLRTDVETSDSQGVLDGDLDAFMGASLAQR 363


>gi|116873873|ref|YP_850654.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742751|emb|CAK21875.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 327

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M +    +      +     +        +   ++E++ +     ++ +   +    +L 
Sbjct: 1   MLDPNFWNDQQAAQKIINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     +              L+  D  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  KDITAYMATINE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 SEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+THIP+GI+V   
Sbjct: 176 SFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQLKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 325


>gi|282853790|ref|ZP_06263127.1| peptide chain release factor 1 [Propionibacterium acnes J139]
 gi|282583243|gb|EFB88623.1| peptide chain release factor 1 [Propionibacterium acnes J139]
          Length = 361

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 201/364 (55%), Gaps = 14/364 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQ 57
           M   + + I +++    EIE ++++   +       +L + +A +  ++S     DQ + 
Sbjct: 1   MSESAQQAIDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +       +   +  ++            E     LL P D  D +  ++EI 
Sbjct: 61  DVEAAEDL--TEEDPAFGLEAERLRGQLDLASTELTE-----LLAPSDPLDQEDALVEIH 113

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI---SGRGVFS 174
           +G GG E+ALF  DL RMY RYA    W V  L+S   D GGY+ +V  +     R  + 
Sbjct: 114 SGEGGEESALFAADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYG 173

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
            +K E GVHRVQRVP TE+SGR+HTSA  V V+P+  E +VDI   +IR+D  R+SG GG
Sbjct: 174 YLKHEGGVHRVQRVPVTESSGRIHTSAVGVLVMPDVDETEVDIDPAEIRVDVYRSSGPGG 233

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+ TGI+V   +E+SQ QN+  AM++LRA++  +  ++ A+E    R
Sbjct: 234 QGVNTTDSAVRLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMR 293

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRS R+RTYNF + R+TDHRI     KL+ +L G + D+++ L      + + 
Sbjct: 294 RDQVRTVDRSARVRTYNFPENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADEVRRRMA 353

Query: 354 SASE 357
              E
Sbjct: 354 QRPE 357


>gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
 gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
          Length = 367

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVKEDVVGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
 gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
          Length = 352

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 17  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 76

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 77  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 131

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 132 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 191

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 192 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 251

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 252 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 308

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 309 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 350


>gi|254900353|ref|ZP_05260277.1| peptide chain release factor 2 [Listeria monocytogenes J0161]
          Length = 327

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M +    +      +     +        +   ++E++ +     ++ +   +    +L 
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     +              L+  D  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  KDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 SEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+THIP+GI+V   
Sbjct: 176 SFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 325


>gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
 gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
 gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275]
 gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013]
 gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196]
          Length = 367

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 367

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 111/374 (29%), Positives = 188/374 (50%), Gaps = 34/374 (9%)

Query: 3   FLSHK-QICDLKNRF-------------AEIELR---MSESPSVDAYIKLTEEYAA---I 42
            L  K +I +LK RF              E+      MS     D   K  +       +
Sbjct: 1   MLELKSKIEELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWL 60

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
              ++ I   ++  ++ ++L     + ++D+         +    + + +   E+     
Sbjct: 61  EETVNSIETLEKSLRDVEELSQTTPEEDTDT------WAILEEEMESLEDKLKELELKTY 114

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D K+  L I+AG GG+EA  +   L+RMY R+A  + + VEV+  + +D  G K 
Sbjct: 115 LSGEMDSKNAYLTIQAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKS 174

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLED 221
           +   + G   +  ++ E GVHR+ R+   +++ R HTS A V+V+P+  E  ++++  ED
Sbjct: 175 VTLLVKGPYAYGYLRGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQIDEDINIEVRDED 234

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           ++I+T RASG+GGQ+VN TD+AVR+THIPTGI+V    E+SQ QNR +A+++L+A+LY +
Sbjct: 235 LKIETFRASGAGGQYVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQL 294

Query: 281 ERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYID 337
           E++++  +R      K  IG G    +IR+Y F   R + D R       ++ V+ G ID
Sbjct: 295 EQQKLMEKRKQYEGEKTDIGWG---HQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDID 351

Query: 338 DIINPLLTAHQAKM 351
             I   L     K 
Sbjct: 352 QFIEGFLKWQAEKK 365


>gi|330836506|ref|YP_004411147.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           coccoides DSM 17374]
 gi|329748409|gb|AEC01765.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           coccoides DSM 17374]
          Length = 369

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 175/341 (51%), Gaps = 11/341 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++ +  E+E + +     +   K  + ++ +S +      +   K+   D+  +I  + +
Sbjct: 28  IEKQIQELEAKTTLPDFWNDKEKAEKTFSDLSSLKDSFFPWRDLKKRIDDVGDLIDLYAN 87

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + +  +    E+ +   +I +  + +    L     D   C L I AG GG+EA+ +   
Sbjct: 88  EDD--ESLVQELDSQILDIEKEFHPLKVKTLLSQRFDKNDCFLSIHAGAGGTEASDWAAM 145

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     +K E+L     D+GG K     +SG+  F  +K E+GVHR+ R+   
Sbjct: 146 LMRMYLRWCERNGFKSEILDMQ-EDEGGIKSTTIRVSGQYAFGYLKGEAGVHRLVRISPF 204

Query: 192 EASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           ++  R HTS  +V   P    EI++DI  EDIR+DT RA G+GGQHVN TDSAVRITH  
Sbjct: 205 DSQKRRHTSFTSVYASPVIDDEIEIDIKPEDIRLDTYRAGGAGGQHVNKTDSAVRITHFE 264

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIR 307
           +GI+V   +E+SQ  N+  A K+LR+RLY+  +++   E    A  K  I  G    +IR
Sbjct: 265 SGIVVQCQNERSQFMNKEVAFKMLRSRLYEYYKEKQEQEHQKTAIAKKGITWG---SQIR 321

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F     + DHR N  +  ++ V+ G IDD I   L   
Sbjct: 322 SYVFQPYTMVKDHRTNCQVGNIQAVMDGDIDDFIEQFLQWD 362


>gi|332971716|gb|EGK10664.1| peptide chain release factor RF2 [Desmospora sp. 8437]
          Length = 331

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/333 (33%), Positives = 173/333 (51%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +   K  +   E   +  I+  +   ++  +E Q +  +I + + +S + +  
Sbjct: 1   MTDPAFWNDQGKAQKVIDENNHLKGIVQGVKELEEAHEELQVIAELIAEEDDESMLPEAE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +       K            LL  D  D  S ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  EGLKDLKRKLDE-----FELSLLLSDPYDKNSAILELHPGAGGTESQDWAQILLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE L     ++ G K +   I G   +  ++ E GVHR+ R+   ++SGR HT
Sbjct: 116 AEHRGYKVETLDFLPGEEAGVKSVTLLIKGHNAYGYLRAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEIDVDIPL-EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  + D      EDI+IDT R+SG+GGQHVNTTDSAVRITH+PT I+V   
Sbjct: 176 SFVSANVMPEIEDDDEIEIRSEDIKIDTYRSSGAGGQHVNTTDSAVRITHLPTNIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR RAMK+L+ARL + + +    E +  +  Q  IG G+   +IR+Y F    
Sbjct: 236 SERSQIKNRDRAMKILKARLVERQMEEKQKEIAELKGEQTEIGWGN---QIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR  + +  ++ V+ G ID  I   L   
Sbjct: 293 MVKDHRTQVEVGNVQSVVDGEIDTFIEAYLRQQ 325


>gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
 gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
          Length = 359

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 91/344 (26%), Positives = 163/344 (47%), Gaps = 7/344 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  +  ++E + ++    +      +    ++ +   ++ Y Q + + +D   +  
Sbjct: 14  DLKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAAAIAE 73

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 +   L +      + +     N      +     D+   +L I AG GG++A  
Sbjct: 74  LLTEAEDPALLTEAMENLDDLQKEL--NRWELQQMLSGEYDNLGAVLTINAGAGGTDAQD 131

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R++  + +KV +   S+ D+ G K     ++GR  F  +K E G HR+ R
Sbjct: 132 WAEMLLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRLVR 191

Query: 188 VPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +    A+G+  TS A V V+P      + VDIP +D+ I T RA G GGQ+VN  ++AVR
Sbjct: 192 ISPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETAVR 251

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTG+ V  + E+SQ QN+ +A+ +L+A+L  + +++ A E +  R   +       
Sbjct: 252 IVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEIRGDMVE-AAWGN 310

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR Y F   + + D R N     ++ V+ G +D  I   L   
Sbjct: 311 QIRNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASLRQD 354


>gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
 gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
          Length = 367

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 105/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K R  E+     +    +      ++ +E   +  I+  +   +    + ++L  ++ +
Sbjct: 32  KKERLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIENGIADNRELIDMVVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N            ++A    + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  END-----ADGFAAIVADVAALEQQMADLEFKRMFNQPADPNNCFVDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G L RMY RYA  + +KVEV+   D +  G       I G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE     +++I   D+R DT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H+PTGI+V + S +SQH+NR   M++LRA+L+++E ++   E+ A    K  +G G    
Sbjct: 267 HLPTGIVVQSQSSRSQHENRRIVMEMLRAKLFELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|320096082|ref|ZP_08027682.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319976962|gb|EFW08705.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 366

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 138/367 (37%), Positives = 203/367 (55%), Gaps = 22/367 (5%)

Query: 5   SHKQICDLK---NRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQE 58
            H  +  L+     +A++E  M+   ++    +L      YA +  + +        + +
Sbjct: 4   PHDDLASLEPLLAEYAQVEQDMASPATLADPARLRRVGRRYAELGRVKAAADRLAAARDD 63

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
                 +  +  S          EV A+E+E       +  +L P+D  D  + ILEI+A
Sbjct: 64  LGAAREIAAEDPS-------FAQEVPALEEEAAAAHEALMRILAPRDPQDALNAILEIKA 116

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRG 171
           G GG E+ALF  DL RMY RYA    W V  +S++  + GG+K++   I          G
Sbjct: 117 GEGGEESALFASDLARMYARYAEAHGWSVTEMSATRTELGGFKDVTLAIRAKGSPAPDEG 176

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRAS 230
           V++ +K+E GVHRVQRVP TE++GR+HTSA  V  +PE  + +   I   D+RID  R+S
Sbjct: 177 VWAHLKYEGGVHRVQRVPVTESAGRIHTSAVGVFAMPEIEDDEDVVIDPNDLRIDVYRSS 236

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQ VNTTDSAVR+TH+P+GI+V+  +EKSQ QN+  A++VL +RL    R +   E 
Sbjct: 237 GPGGQSVNTTDSAVRVTHLPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKREAEA 296

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           SA R  Q+ + DRSERIRTYNF + RI DHR     + L+ VL G +D +I  L  A +A
Sbjct: 297 SAQRLSQVRTVDRSERIRTYNFPENRIADHRTGFKAHNLDQVLGGALDPVIASLREADEA 356

Query: 350 KMIGSAS 356
           + +  A+
Sbjct: 357 ERLAQAA 363


>gi|16804547|ref|NP_466032.1| peptide chain release factor 2 [Listeria monocytogenes EGD-e]
 gi|16411997|emb|CAD00587.1| prfB [Listeria monocytogenes EGD-e]
          Length = 327

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M +    +      +     +        +   ++E++ +     ++ +   +    +L 
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     +              L+  D  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  KDIKAYMATISA-----FELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 SEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+THIP+GI+V   
Sbjct: 176 SFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 325


>gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           COL]
 gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|56749392|sp|Q6GB76|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56749443|sp|Q7A6R4|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56749454|sp|Q99VM1|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71153100|sp|Q5HHR5|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115311853|sp|Q2YSH5|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|189040005|sp|A6TZN3|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift
           [Staphylococcus aureus subsp. aureus COL]
 gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 369

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 173/348 (49%), Gaps = 17/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHT 64
            + + +    E E  M+E    D   K  +      A+  I++       +  +      
Sbjct: 25  DLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWD 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    DL Q  +    K            LL     D  + ILE+  G GG+E
Sbjct: 85  LLQEEFDEEMKEDLEQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   LFRMY+RY   + +KVE +     D+ G K +   I G   +  +K E GVHR
Sbjct: 140 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           + R+   ++SGR HTS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+S
Sbjct: 200 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 259

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGS 299
           A+RITH P+GI+V   +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG 
Sbjct: 260 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGW 319

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           G    +IR+Y F     + DHR N    K++ V+ G I   I   L  
Sbjct: 320 G---SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 364


>gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
 gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
          Length = 358

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 159/342 (46%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK R  ++E   S+    D      ++   +  + +++   ++ K    D    + 
Sbjct: 7   DVPALKARQQDLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAEATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            H  + +   L +              +      L     D +  +L I AG GG++A  
Sbjct: 67  LHELEPDGDLLEEANAGLTSLRGDL--DRWELERLLSGPYDKEGAVLTINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A      V V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 125 WAQMLLRMYTRWAEDHGMTVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+  E   +DIP +D+ I T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L A+L  + +++ A E +  R   I       +
Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R       ++ V+ G +D  I  LL A
Sbjct: 304 IRNYVFHPYQLVKDLRTQHETTDVQGVMDGDLDPFIQSLLHA 345


>gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
           DSM 15981]
 gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
           DSM 15981]
          Length = 338

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 104/327 (31%), Positives = 175/327 (53%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    D   K T     +  +   +  Y + +QE  D+  +I     +++   +    
Sbjct: 1   MEEPGFWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYEEND-ASVIPDI 59

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              ++  I+ LE+    LLL  + D   + IL + AG GG+E+  +   L+RMY R+A  
Sbjct: 60  QEMLDHFIKTLEDMRLKLLLSGEYDK-NNAILRLNAGAGGTESCDWCSMLYRMYCRWAER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +K EVL   D D+ G K +   ++G   +  ++ E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGFKYEVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+     DV++  +DIR+DT R+SG+GGQH+N T SA+RITH+PTGI+V   +E+
Sbjct: 179 SCDVMPDIEADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QN+ +AM++L+A+LY ++++  A + +  R  ++       +IR+Y       + DH
Sbjct: 239 SQFQNKDKAMQMLKAKLYMLKQQESAAKAAGIR-GEVKDIGWGNQIRSYVLQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R       ++ VL G ID  I+  L  
Sbjct: 298 RTGEESGNVDAVLDGSIDSFISAYLRW 324


>gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD]
 gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD]
          Length = 378

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 101/355 (28%), Positives = 169/355 (47%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK   A++E + +E    D      +  + +S   S++      +Q  +D  T+I 
Sbjct: 25  DVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVEQRIEDTKTLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   + + +            +++    L     D +S ++ IR+G GG +AA 
Sbjct: 85  LGEEEGDADSMNEAQEELGNIAHEL--DDMEVQTLLDGEYDARSAVVTIRSGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K +++ +S  ++ G K     +     + R+  E G HR+ R
Sbjct: 143 FAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  T  + V V+P   A   +DIP  DIR+DT +ASG GGQ VNTT SAVRI
Sbjct: 203 ISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRI 262

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRS 303
           TH+PTG++V+   E+SQ QNR  AM VL++RL  ++      E +A +K   G       
Sbjct: 263 THLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK----HAEEAAKKKELAGDIKASWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G ID  I   +     + + +  E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAAQKE 373


>gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|56749421|sp|Q6GIN7|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA252]
          Length = 369

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 172/348 (49%), Gaps = 17/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHT 64
            + + +    E E  M+E    D   K  +      A+  I++       +  +      
Sbjct: 25  DLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWD 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +        DL Q  +    K            LL     D  + ILE+  G GG+E
Sbjct: 85  LLQEEFDGEMKEDLEQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   LFRMY+RY   + +KV+ +     D+ G K +   I G   +  +K E GVHR
Sbjct: 140 SQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           + R+   ++SGR HTS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+S
Sbjct: 200 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 259

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGS 299
           A+RITH P+GI+V   +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG 
Sbjct: 260 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGW 319

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           G    +IR+Y F     + DHR N    K++ V+ G I   I   L  
Sbjct: 320 G---SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 364


>gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579]
 gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33]
          Length = 367

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
 gi|24638159|sp|Q9JXB3|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
 gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
 gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385]
          Length = 367

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +++E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|295092740|emb|CBK78847.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium cf.
           saccharolyticum K10]
          Length = 333

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 169/330 (51%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    D      KL  E   +   +      +Q+ ++ Q +  +  + N  S I ++ 
Sbjct: 1   MEEPGFWDDPETSTKLMREAKNLKDTVENYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
            +    + K        I    L     D+ + IL++ AG GG+EA  +   L+RMY+R+
Sbjct: 61  GMMDDFVAKLEA-----IRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +   V+   D ++ G K I   I+G   +  +K E GVHR+ R+    ++G+  T
Sbjct: 116 SDKKGFTTSVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+P+  E  DV+I  +++RIDT R+SG+GGQH+N T SA+RITH+PTGI+V   
Sbjct: 176 SFVSCDVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QN+  AM++L+ +LY ++++  A + S  R   +   +   +IR+Y       +
Sbjct: 236 NERSQFQNKEVAMQMLKTKLYMMKQEEHAEKLSDIR-GDVKDINFGNQIRSYVMQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR       +  VL G ID  I+  L  
Sbjct: 295 KDHRTGAESGNVNAVLDGDIDLFISAYLKW 324


>gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
           10105]
 gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
           10105]
          Length = 396

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 99/356 (27%), Positives = 174/356 (48%), Gaps = 15/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--I 66
           +  L+ + AE+E + S     D         + +S   ++     +  Q   D+ T+  +
Sbjct: 45  LDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTEAGQRLDDIDTLYSL 104

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
           G    D + +  A  E+  + K++ ++E +           D+++ ++ IR+G GG +AA
Sbjct: 105 GMEEEDEDSKQEAWSELKKLSKDLSDIEIQTL----LDGEYDNRAAVVTIRSGAGGVDAA 160

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   ++KV+V+ +S  ++ G K     +     + ++  E G HR+ 
Sbjct: 161 DWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKLSVEGGTHRLV 220

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   + + R  TS A V V+P       +D+P  D+R+DT  + G GGQ VNTT SAVR
Sbjct: 221 RISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQGVNTTYSAVR 280

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDR 302
           +TH+PTGI+V    E+SQ QNR  AM VL++RL  ++++    E +A +K   G      
Sbjct: 281 LTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQE----EEAAKKKELAGDIKASW 336

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            +++R+Y     + + D R        + V  G ID  I+  +     +   +  E
Sbjct: 337 GDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWRHQQRKEARQE 392


>gi|331701705|ref|YP_004398664.1| peptide chain release factor 2 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129048|gb|AEB73601.1| Peptide chain release factor 2 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 373

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 177/349 (50%), Gaps = 10/349 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A  E +M+E    D      +     + + +K   +   K +  DL   + 
Sbjct: 27  DLDALSESIAINESKMAEPGFWDDQEAAQKLIDQTNQLKTKRDNFVGLKNKLDDLKVTLE 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               DS      + E    EK+++   +     LL     D  + ILEI  G GG+EA  
Sbjct: 87  LIEEDSH--SGMEGEFETDEKQLKTKLDRYQLNLLLNGKYDHNNAILEIHPGAGGTEAQD 144

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    + V+ L     D  G   +   ISG   +  ++ E G+HR+ R
Sbjct: 145 WGSMLLRMYTRWAEAHGFTVQTLDYQVGDVAGLNSVSLLISGENAYGYLRSEKGIHRLVR 204

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS A+V V+PE   ++ +DI  +D+RID  R+SG+GGQH+N T SAVRI
Sbjct: 205 LSPFDSAGRRHTSFASVDVMPELNDDVSIDINPDDLRIDVYRSSGAGGQHINKTSSAVRI 264

Query: 247 THIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           TH+PTGI+  + +++SQ QNR  AM +L+++LY++E ++ A E++     +  IG G   
Sbjct: 265 THLPTGIVAASQAQRSQLQNRQTAMNMLKSKLYELEEEKKAEEKAKIEGEQKDIGWG--- 321

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y F     + DHR N     +  V+ G +D  IN  L    ++ 
Sbjct: 322 SQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQLSQK 370


>gi|321310997|ref|YP_004193326.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford
           1]
 gi|319802841|emb|CBY93487.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford
           1]
          Length = 364

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 148/349 (42%), Positives = 224/349 (64%), Gaps = 4/349 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           K +  +  ++ ++  R+ +       I++ +E A +  I      Y ++ +   +   +I
Sbjct: 11  KTLATIHEKYVQLNKRLEQETEGKEIIQINKEIAKLEKIAQGFIEYKKELENLDECLEII 70

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               S+ E   LAQ E+ A ++ I ELEN +  LL+P D  D+K+ I+E+R+  GG E+ 
Sbjct: 71  K-KESNPEFVKLAQSELEAGKRRIPELENSLKRLLIPTDPMDEKNVIVEMRSAAGGDEST 129

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           +FV +LF  Y+RYA +  WK+ +L+  +N   G   +  ++SG+ VFS+MKFESGVHRVQ
Sbjct: 130 IFVENLFDTYKRYADMNNWKLTILNIQENSI-GMHFLAFSLSGKNVFSKMKFESGVHRVQ 188

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVPATE+ GRVHTS  TV+V+PE  +I+++I   D+RID  RASG+GGQHVN T+S+VRI
Sbjct: 189 RVPATESKGRVHTSTITVSVMPEQDDIEINIDPSDLRIDVYRASGAGGQHVNKTESSVRI 248

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V    EKSQ QNR  AMK+LR++L++ E+++ + E +   + QIG G R E+
Sbjct: 249 THLPTGIVVACQQEKSQIQNRAFAMKMLRSKLWEHEQEKQSKEIAETVRKQIGRGFRCEK 308

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKMIG 353
           IRTYN+ Q RITDHR++LTL KL  ++  G + +I   LL     + + 
Sbjct: 309 IRTYNYPQNRITDHRVSLTLNKLNEIMIGGDLTEIHESLLNQQAEESLS 357


>gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
 gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
 gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
           13091]
 gi|166225113|sp|A1KWK6|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
 gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153]
 gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis
           8013]
 gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
 gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
           13091]
 gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710]
 gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190]
          Length = 367

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
           33313]
 gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
           33313]
          Length = 396

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 176/347 (50%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L +  A  E +M E       +   +     + +  +   Y +     +++   I 
Sbjct: 50  DLDALNDEIAANEAKMVEPDFWQDNVAAQKIIDENNVLKGRRDDYLKLANGVENVEAAI- 108

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D  S+    D+A      ++K   +L       LL +  D   + ILEI  G+GG+E+A 
Sbjct: 109 DLLSELYDEDMATEMADDLDKLSEDLSAYRLAQLLNEPYDK-NNAILEIHPGSGGTESAD 167

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L RMY R+A    +KV+++     D  G   +   I+G   +  ++ E GVHR  R
Sbjct: 168 WGANLQRMYTRWAEQHGFKVDIMDYHPGDVAGVDSVTLMITGHNAYGYLRSERGVHRFVR 227

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++GR HTS  ++ V+PE    ++VDI   D+++D  RASG+GGQH+N T SAVR+
Sbjct: 228 ISPFDSAGRRHTSFVSIDVMPELDDSVEVDINPADVKMDVYRASGAGGQHINKTSSAVRL 287

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V +  ++SQ QN+  A  +LRA+LY +E  +   ER+A     + +G    +
Sbjct: 288 THIPTGIVVASQQQRSQFQNKDTAYAMLRAKLYQLEMDKKEKERAAIAGDHLENG-WGSQ 346

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           IR+Y F   R + DHR        + V+ G +D  IN  L    ++ 
Sbjct: 347 IRSYVFQPYRMVKDHRDGFESGNPQAVMDGDLDPFINAYLRWRLSEQ 393


>gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
 gi|224955151|gb|EEG36360.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
          Length = 371

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 6/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +     +  E+E  M E    +   K  E    +  +   +S Y   +    D+ T+I  
Sbjct: 27  LSHKHEQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHALELTLDDVSTMIEL 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +++       ++  +  E     + +    L     D  + I+ + AG GG+E+  +
Sbjct: 87  GNEEND--ASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTLHAGAGGTESCDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G L+RMY ++A    +K EVL   D D+ G K I   ++G   +  +K E GVHR+ R+
Sbjct: 145 AGMLYRMYSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYLKSERGVHRLVRI 204

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS A+  V+P+  E   V+I  EDIRIDT RASG+GGQH+N TDSA+RIT
Sbjct: 205 SPFNAAGKRQTSFASCDVMPDIEEDLSVEIADEDIRIDTYRASGAGGQHINKTDSAIRIT 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG++V   +E+SQH+N+ +AM++L+A+LY ++ +    + S  R  ++       +I
Sbjct: 265 HIPTGVVVQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIR-GEVSDNGWGNQI 323

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y       + DHR       ++ V+ G +D  +N  L  
Sbjct: 324 RSYVMQPYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYLRW 364


>gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str.
           Manfredo]
 gi|166225116|sp|A2RFN2|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str.
           Manfredo]
          Length = 365

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 187/348 (53%), Gaps = 12/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E  M+E    +  I   +    ++ +  K   +   ++   +   ++ 
Sbjct: 25  DLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D  +++  +  ++     + ++       LL  +  D  + ILEI  G+GG+EA  
Sbjct: 85  MLDEDDSLKEELEENLMQ----LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+     +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R
Sbjct: 141 WGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS A+V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+
Sbjct: 201 ISPFDSAKRRHTSFASVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRL 260

Query: 247 THIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+V+S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G   
Sbjct: 261 THIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG--- 317

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            +IR+Y F+    + DHR N  L +++ V+ G I+  I+  L      
Sbjct: 318 SQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 365


>gi|41409273|ref|NP_962109.1| peptide chain release factor 2 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398093|gb|AAS05723.1| PrfB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 373

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 163/346 (47%), Gaps = 5/346 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R  ++E   S+    D   +     + +S    ++   ++ +    DL  +  
Sbjct: 27  DVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEELRARLDDLPVLYE 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D E    A  E  A  K +R          L     D++  ++ IR+G GG +AA 
Sbjct: 87  LAAEDGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAAD 146

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 147 WAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVR 206

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 207 ISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVRL 266

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K + GS     +
Sbjct: 267 THIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDAL-KGEGGS-SWGNQ 324

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 325 MRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWRNRK 370


>gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
           20162]
 gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
           20162]
          Length = 371

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 165/344 (47%), Gaps = 6/344 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L+ R  E+E + S+    +      +  + +S   S++      +Q   DL  +  
Sbjct: 24  DLDELRRRVDELEHKASDPELWNDQANAQQVTSQLSHAQSELRRVTDLRQRLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENE-INYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              ++      A +E    ++     E E +    +     D +  ++ IRAG GG +AA
Sbjct: 84  LAEAEEGDDLAAALEDADADRAKLRGEIEAMEVKTMLSGEYDARDALVNIRAGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    + VEV  +S  ++ G K     I     +  +  E G HR+ 
Sbjct: 144 DWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGLKSATFAIKTDYAYGTLSVEMGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V VLP       +D+   ++R+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQGRRQTSFAEVEVLPVVETTDHIDVDENEVRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V   +EKSQ QN++ AMKVL+A+L + +R+    +  A +  +  S     
Sbjct: 264 LTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKRQEERAQMDALKTTEGAS--WGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           ++R+Y     + + D R N  +     VL G +D  I   +   
Sbjct: 322 QMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDLDGFIEAGIRWR 365


>gi|254508224|ref|ZP_05120348.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16]
 gi|219548841|gb|EED25842.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16]
          Length = 320

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 101/323 (31%), Positives = 167/323 (51%), Gaps = 12/323 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E +A+  ++  I   +Q  ++   L  +  +        ++        
Sbjct: 3   NEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPE----- 57

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
             E+     ++ +  +     D   C +++++G+GG+EA  +   + RMY R+A  + +K
Sbjct: 58  LAELEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            EV+  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  +
Sbjct: 118 TEVIEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFI 177

Query: 207 LPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE  +         D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+
Sbjct: 178 YPEIDDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  
Sbjct: 238 NKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLT 345
           +     + VL G +D  I   L 
Sbjct: 295 VENRNTQAVLDGDLDKFIEASLK 317


>gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
 gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
 gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 370

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 185/348 (53%), Gaps = 10/348 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+++  E+  +  E    D   K  +    ++    K++ YD+     +D + ++ 
Sbjct: 27  DVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELNSYQRKVNPYDEISDLIEDANDILL 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +     + + L +  E +  E ++  LL  +  ++    IL I AG GG+EA  
Sbjct: 87  LMEMEDDYSSYDEFKKLILNIEKKVSEYKLETLLNGEFDEN--DAILSIHAGAGGTEAQD 144

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY RYA  + +KVE L     D+ G K +   ISG   +  +K E GVHR+ R
Sbjct: 145 WASMLLRMYVRYATNKGFKVETLDILKEDEAGIKSVTLKISGEHAYGFLKGEKGVHRLVR 204

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ R HTS ++V V P    +ID++I  ED++IDT R+SG+GGQHVNTTDSAVRI
Sbjct: 205 ISPFDANKRRHTSFSSVDVFPDIDGDIDIEIKDEDLKIDTYRSSGAGGQHVNTTDSAVRI 264

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRS 303
           THIPTGI+V   +E+SQ QNR RAM+ L+A+L  +  +    +    +    QI  G   
Sbjct: 265 THIPTGIVVQCQNERSQIQNRERAMQTLKAKLLALAEEERKEKIDDLQGNYSQIAWG--- 321

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            +IR+Y F     + DHR N  +  +  V+ G +D  IN  L ++  K
Sbjct: 322 SQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFINAYLQSNATK 369


>gi|158425248|ref|YP_001526540.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
 gi|158332137|dbj|BAF89622.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
          Length = 376

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/347 (28%), Positives = 166/347 (47%), Gaps = 10/347 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           H  +   + R AE+     +    D   +  +     + +   ++  D+  ++  D   +
Sbjct: 22  HLNVDRSRRRLAELNAIAEDPTLWDDPERAQKIMQERTSLEDALNAIDRITRDLTDNIEL 81

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I     ++E  +    E       ++          L     D     LE+ AG GG+++
Sbjct: 82  IEL--GEAEGDESVITEAAGALDALKAELARRELDALLSGEADSNDTYLEVHAGAGGTDS 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+     +KVE++  S  +  G K     + G   +  +K E+GVHR+
Sbjct: 140 QDWAEMLLRMYRRWCERHGFKVELVDESAGEQAGLKSATIIVKGHNAYGWLKTEAGVHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ R  TS A++ V P   +   V+I   D+R+DTMR+ G+GGQHVN T+SAV
Sbjct: 200 VRISPFDSNARRQTSFASIDVYPVIDDRIVVEINESDVRVDTMRSGGAGGQHVNKTESAV 259

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGD 301
           R+THIPTGI +V+  ++SQH+NR  A  +LRA+L+++E K+   A       +  IG G 
Sbjct: 260 RLTHIPTGIAVVSQGDRSQHKNRATAWNMLRAKLFEMELKKREEAAAAEQAARTDIGWG- 318

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y     + + D R  +T    + VL G +D  +   L   
Sbjct: 319 --HQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363


>gi|323706500|ref|ZP_08118060.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534162|gb|EGB23953.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 327

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 114/330 (34%), Positives = 174/330 (52%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MSE    +    + +L+++   +  IIS+    +++ ++   L  +  +   +S  +++ 
Sbjct: 1   MSEPDFWNDLEKFQELSKKQKDLKEIISEYEALEKQWEDLHTLIELGLEEGDESLSQEVH 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +K             L     D  + IL I AG GG+EA  +   L RMY R+
Sbjct: 61  EEYKALSKKINDM-----KIKTLLSGPYDKNNAILSIHAGAGGTEAQDWTEMLLRMYMRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A+ + + VE +     DD G K +   + G   +  +K E+GVHR+ R+   +A+GR HT
Sbjct: 116 ASSKNYDVETVDYLPGDDAGVKSVTIMVKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V VLPE  +   VDI  ED++IDT R+SG+GGQHVN T+SA+RITHIPTGI+V   
Sbjct: 176 SFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QNR  AMK+L+A+L D+  K    +     K +        +IR+Y F     +
Sbjct: 236 TERSQMQNRETAMKMLKAKLMDMMIKEQKEKIEDL-KGEHKEAGWGNQIRSYVFQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N  +  +  V+ G IDD IN  L  
Sbjct: 295 KDHRTNFEVGNVNAVMDGEIDDFINAYLKQ 324


>gi|323697942|ref|ZP_08109854.1| peptide chain release factor 2 [Desulfovibrio sp. ND132]
 gi|323457874|gb|EGB13739.1| peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
          Length = 372

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 170/340 (50%), Gaps = 16/340 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           K R   IE  +S+  + D    LT   +E + +S  +       + K +      +  + 
Sbjct: 31  KTRLDAIEKEISKPGAWDNPEALTPLLKEKSQLSTKLEMYDGLSEAKDDLDAWLELAQED 90

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             +  +  L     L  E+             +     D    ILEI  G GG E+  + 
Sbjct: 91  PDEESLSALNAQVALLRERL-----AGTELATMFAFEHDKGDAILEIHPGAGGVESQDWA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY RYA  + +KV  L     ++ G K +   I G   +  +K E+GVHR+ R+ 
Sbjct: 146 EMLLRMYYRYAERKGFKVTQLDYQAGEEAGLKSVTLQIEGLFAYGLLKGETGVHRLIRIS 205

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++SGR HTS A+V V P+  E  ++++  ED+RIDT R+SG GGQ VN T SAVRITH
Sbjct: 206 PFDSSGRRHTSFASVDVYPDMDENIEIEVKDEDLRIDTFRSSGPGGQSVNKTSSAVRITH 265

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSER 305
           IPTGI+    +EKSQH+N+  A+++++ARLY+ E K++   R  +   K  I  G    +
Sbjct: 266 IPTGIVAQCQNEKSQHRNKATALRLVKARLYERELKKIEESRRQDYQAKDAIAWG---SQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           IRTY     R + DHR N     ++  L G +D++I   L
Sbjct: 323 IRTYTLQPYRLVKDHRSNCESGNVDAFLDGDLDEMIRNYL 362


>gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
 gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
          Length = 367

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 173/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              + R  E+     +           +L  E   +  ++  +    Q   +  +L  + 
Sbjct: 30  DTKQERLTEVCELAEDPAIWQDAKRAQELGRERKMLESVVFGLGKIQQDLTDAAELFEMS 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N ++ +   A        +          +  +     D  SC ++I+AG+GG+EA 
Sbjct: 90  QEENDEASLMSTAADIDDIERRVAEM-----EFRRMFNHPMDPNSCFIDIQAGSGGTEAQ 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY RYA  + ++VEVL  SD D  G K     + G   F  ++ E+GVHR+ 
Sbjct: 145 DWASMLMRMYVRYAERKGYQVEVLEISDGDVAGIKGASIKLIGEYAFGHLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS ++V V PE  +  +++I   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 205 RKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPT I+V   S++SQH+NR  AM +L++R+Y+ E ++   E+      K  IG G  
Sbjct: 265 ITHIPTNIVVQCQSDRSQHRNRAEAMAMLKSRMYEEELRKRNEEKQEMEDGKTDIGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R N  +   + VL G +DD I+  L  
Sbjct: 323 -HQIRSYVLDQSRIKDLRTNHEVGNTQGVLDGDLDDFISASLKQ 365


>gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 367

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS ++V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
 gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
 gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
 gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
          Length = 367

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS ++V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204]
 gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204]
          Length = 350

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 177/346 (51%), Gaps = 6/346 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   +   + R AE    M+E+   +   K  +     + +   I  +        +L
Sbjct: 1   MATLFDLEGKEKRLAENNALMAEADFWNDQKKAQKIIRESNQLKVLIETHHSLTDSFAEL 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              IG+ +S  +      I     E   +  E EI  LL     +   + ILEI  G GG
Sbjct: 61  SEGIGELSSSFDEDMNELISEEYTETMKKFEEFEIQVLLSGPYDNH--NSILEIHPGAGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L+RMY R+A  + +K+E++   + ++ G K     I G   +  +K E+GV
Sbjct: 119 TEAMDWAAMLYRMYMRWAERKGFKIELMDYQEGEEAGMKSCSVLIQGPMAYGYLKAENGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +++ R HTS A+V ++PE  +  +++I  +D+ I TMRASG+GGQH+N TD
Sbjct: 179 HRLVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIDDKDLDIITMRASGAGGQHINKTD 238

Query: 242 SAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIP+G  +   S++SQ QNR   + +L+++L  ++ +    ER+A  + ++ + 
Sbjct: 239 SAVRMTHIPSGITVFCQSQRSQIQNREACLNMLKSKLLQLKIRE-NEERAAAVRGEVKAN 297

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +   +IR+Y F+    + D R       ++ V+ G ID  I+  L 
Sbjct: 298 EWGSQIRSYVFAPYTMVKDLRTGHEAGNVQAVMDGEIDGFIDSYLR 343


>gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
 gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
 gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 336

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 186/341 (54%), Gaps = 12/341 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E +M+E    +  I   +    ++ +      +++ ++   +    +   + 
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D    D  Q E+    +++ ++       LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  D----DSVQAELEESLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY RY   + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LFRMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS ++V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFSSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F+    + DHR    + +++ V+ G ID  I+  L   
Sbjct: 294 SYVFTPYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
           11109]
          Length = 369

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 187/342 (54%), Gaps = 10/342 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   K R AEIE+  ++        + ++       +   ++++ ++ ++ +DL  ++ 
Sbjct: 27  DLEKKKARLAEIEVLAAKPDFWQNSSQSSQILKERGALTHLLTVWQEQGKKIEDLEVLLE 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +++  + A ++VL   K       ++   +L    DDDK  I+ I AG GG+EA  
Sbjct: 87  LAQEETD--EQAFVDVLTDLKVQERALQQLELEMLLGGEDDDKDAIITIHAGAGGTEAQD 144

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  + ++ E+      D+ G K     +SG   +  +K ESG+HR+ R
Sbjct: 145 WAEMLLRMYLRFAERQGFRTEIYDLLPGDEAGVKSSTFAVSGPHAYGYLKSESGIHRLVR 204

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +ASGR HTS A V V PE   +I +D+  +D+RIDT RASG+GGQHVN T SAVR+
Sbjct: 205 ISPFDASGRRHTSFAAVFVYPEADEDIQIDLQEKDLRIDTFRASGAGGQHVNKTSSAVRL 264

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRS 303
           THIPTGI+V+  +E+SQH+NR  AM+VL++RLY++E+ +   +     + +  I  G   
Sbjct: 265 THIPTGIVVSMQNERSQHRNRELAMRVLKSRLYELEKSKRQEKAQVVLDAQKDIAWG--- 321

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            +IR+Y     R I DHR       +E VL G +D  I   L
Sbjct: 322 SQIRSYVLQPYRLIKDHRTKHEEGNVEAVLDGDLDAFIEAYL 363


>gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090]
 gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945]
 gi|239999963|ref|ZP_04719887.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18]
 gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140]
 gi|240081863|ref|ZP_04726406.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|240114140|ref|ZP_04728630.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|240116780|ref|ZP_04730842.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|240119007|ref|ZP_04733069.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1]
 gi|240122455|ref|ZP_04735411.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|240126695|ref|ZP_04739581.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|240127168|ref|ZP_04739829.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
 gi|260441572|ref|ZP_05795388.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
 gi|75432344|sp|Q5F5H5|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|238693228|sp|B4RQU4|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA
           1090]
 gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945]
 gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
 gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
 gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 367

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLIEMAVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVKEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|262201848|ref|YP_003273056.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247]
 gi|262085195|gb|ACY21163.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247]
          Length = 364

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 144/357 (40%), Positives = 206/357 (57%), Gaps = 17/357 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+    A +E ++S+    D      ++ + +A ++P+++  +     + +      +
Sbjct: 15  IDDILAEHAGLEQQLSDPALHDDPAAARRVGKRFAELAPVMATHARLVAARDDLAAAREL 74

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D  + +E        + A+E  + EL+  +  LL P+D  D    +LEI++G GG E+
Sbjct: 75  AADDPAFAEE-------IPALESTVAELDATLTDLLAPRDPHDGDDVVLEIKSGAGGEES 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-----GRGVFSRMKFES 180
           ALF  DL RMY +Y     WK +VL  +++D GGYKE   +I        GV+SR+KFE 
Sbjct: 128 ALFAADLARMYLKYCERHGWKAQVLGVTESDLGGYKEATLSIKAKEAVREGVWSRLKFEG 187

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+HTSAA V + PE  E   V I   D+RID  R+SG GGQ VNT
Sbjct: 188 GVHRVQRVPVTESQGRIHTSAAGVLIYPEPEELEQVAIDESDLRIDVYRSSGKGGQGVNT 247

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL     +      +  R  QI 
Sbjct: 248 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEEAQAAAAQGRAAQIR 307

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           + DRSERIRTYNF + RI DHRI      L+ VL G +D +++ L+ A +   + + 
Sbjct: 308 TVDRSERIRTYNFPENRIADHRIGYKANNLDAVLGGEMDGLLDALVAADRQARLEAQ 364


>gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 341

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 6/343 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A+ E +M      D   K  +  + ++   +          +  DL  +  +   
Sbjct: 1   MEEDIADYEHQMLAPDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDL-GMALELYE 59

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           +S+  D+       +    + L N    LLL    D   + ILEI  G GG+E+  +   
Sbjct: 60  ESQDLDMLSEAEDIMTVTSKALNNYELQLLLSGPHDS-ANAILEIHPGAGGTESQDWGSM 118

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY+R+A  + ++VEVL     D+ G K +   I G   +  +K E GVHR+ R+   
Sbjct: 119 LLRMYQRWADKQGFQVEVLDYQAGDEAGIKSVTLEIKGHNAYGYLKSEKGVHRLVRISPF 178

Query: 192 EASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS A++ V PE  +  +++I  +DIR+DT RASG+GGQH+N T SAVRITHIP
Sbjct: 179 DSNARRHTSFASIEVTPEMDDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIP 238

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI+  + +++SQ QNR +AM +L+A+LY  E +  A E +A +  Q+  G    +IR+Y
Sbjct: 239 TGIVTQSQAQRSQFQNRDQAMAMLKAKLYQREEEERAKEMAAIKGQQLEIG-WGSQIRSY 297

Query: 310 NFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            F     + DHR    +   + V+ G +D  ++  L       
Sbjct: 298 VFHPYSMVKDHRTGYEVGNSQAVIDGDLDGFMDAYLKWQVQNQ 340


>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
 gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
          Length = 372

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++ +  E+  + +     +      +  + +S +  +++  +   Q  +DL  +  
Sbjct: 25  DLDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVESLGQRLEDLTVLYE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D E R+ A  E+ +++ +I  LE       L     D +  ++ I +  GG +A
Sbjct: 85  LAAAEDDEETREEADRELASLKSDIGALEV----RTLLSGEYDAREAVVTINSQAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A +   L RMY R+A  + +  EV  +S  ++ G K    T+     +  ++ E G HR+
Sbjct: 141 ADWAQMLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTLRGEHGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P       +DI  +D+R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVDVVPVVETTDHIDINEDDLRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+  AM VL+++L + +R+  A   +  R     +    
Sbjct: 261 RLTHLPTGIVVSCQNERSQLQNKATAMAVLQSKLLERKRQEEAAALNEIRGE--ATTSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            +IR Y     + + D R          VL G +D+ I   +   + +
Sbjct: 319 TQIRNYVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEIRWTRRQ 366


>gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 329

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 16/337 (4%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS     D       L  E   +   +   S    + ++      +  + + D   R+  
Sbjct: 1   MSAPDFWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLGREAV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +            L L     D  SC + I AG GG+EA  +   L RMY R+
Sbjct: 61  EEFARWQKSLAD-----FELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              R + V  L S+D DD G + +   + G   +  +K E G+HR+ R+   +++G+ HT
Sbjct: 116 CERRGFSVTYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHT 175

Query: 200 SAATV-AVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ A    +  I+++I  +D+++DT R+ G GGQ+VN  ++AVRITHIP+G++V   
Sbjct: 176 SFASLDATPEVSDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQGR 315
           +E+SQ +N+  AM +LRA+LY +E  +   E  R  + K  IG G+   +IR+Y F   +
Sbjct: 236 NERSQLRNKEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGN---QIRSYVFQPYQ 292

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + D R  +    ++ V+ G +D  I  +L  H+ + 
Sbjct: 293 MVKDLRTGVESGNIQDVMDGNLDPFIEAMLRGHKRER 329


>gi|167039139|ref|YP_001662124.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
 gi|166853379|gb|ABY91788.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
          Length = 330

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/330 (34%), Positives = 173/330 (52%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS+        K   L ++  A+  ++ + +    K ++   L  +  +   +S   ++ 
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +K        +    L     D  + IL I AG+GG+EA  +   L RMY R+
Sbjct: 61  KEYKELKKKLED-----LKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + ++VE L     ++ G K +   I G   +  +K E+GVHR+ R+   +A+GR HT
Sbjct: 116 ANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V VLPE   +I+V+I  ED++IDT RASG+GGQ+VN T+SAVRITH+PTGI+V   
Sbjct: 176 SFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           SE+SQ QNR  AMK+L+A+L D+  K    +     K +        +IR+Y F     +
Sbjct: 236 SERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEHREAAWGNQIRSYVFQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N  +  ++ V+ G ID  IN  L  
Sbjct: 295 KDHRTNYEVGNVQAVMDGEIDGFINAYLKQ 324


>gi|54297691|ref|YP_124060.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris]
 gi|53751476|emb|CAH12894.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris]
          Length = 335

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 169/337 (50%), Gaps = 15/337 (4%)

Query: 17  AEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   +  S   D       L  E   +  I+  +S   Q   ++++L  +  + + + 
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            I D+         K I +    + +  +     D  +  L+I+AG+GG+EA  +   L 
Sbjct: 62  TIIDIGDE-----LKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLL 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+     +  E++  S  +  G K      +G   F  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
             R HTS A V V PE  +         D+RIDT RASG+GGQHVN TDSAVRITHIP+G
Sbjct: 177 GNRRHTSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSG 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
           I+V   +++SQH+N+ +AMK LRA+LY++E ++   E+ A    K  IG G    +IR+Y
Sbjct: 237 IVVQCQNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEATKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              Q RI D R  +     + VL G +D  I   L A
Sbjct: 294 VLDQSRIKDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|81428109|ref|YP_395108.1| peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609750|emb|CAI54796.1| Peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 332

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 16/337 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL---HTVIGDHNSDSEIRDLA 79
           M +    +      +     + +  K   ++Q + + ++L     ++ +   D       
Sbjct: 1   MGDPDFWNDQQSAQQLIDQNNVLKEKYDSFNQLQAQFEELSVTLELLQEEPDDELQASFE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                   +  +          L     D  + I+E+  G GG+E+  +   L RMY R+
Sbjct: 61  ADLEQIQSQMRQ-----YELGQLLSGEYDSNNAIVELHPGAGGTESQDWGAMLLRMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + VE       ++ G K +   I G   +  ++ E GVHR+ R+   +++GR HT
Sbjct: 116 ADAHGFTVETEDYQAGEEAGIKSVTLMIKGHNAYGLLRSEKGVHRLVRISPFDSAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE    ID+++  ED+R+D  R+SG+GGQH+N T SAVR+TH+PTGI+V + 
Sbjct: 176 SFCSVDVMPELDGSIDIEVRTEDLRVDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +++SQ QNR  AM +L+A+LY  E++  A + +A +  Q  IG G    +IR+Y F    
Sbjct: 236 AQRSQLQNRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWG---SQIRSYVFHPYT 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + DHR N      + V+ G +D  +   L    ++ 
Sbjct: 293 MVKDHRTNYETGNGQAVMDGDLDPFMYAYLQWQLSQK 329


>gi|23099950|ref|NP_693416.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
 gi|22778181|dbj|BAC14451.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
          Length = 327

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/333 (33%), Positives = 173/333 (51%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M++    D   K        + I   ++ ++  ++  ++L     ++ + N      DL 
Sbjct: 1   MADPSFWDDQNKAQSVIQETNGIKEYVNGFETIEENLENLEVSYELVKEENDQELFADLD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I    +         LL  +  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  AELQQFITDVNQ-----FELQLLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEERNFKVETLDYLPGDEAGLKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V PE ++  D+DI  EDI++DT RASG+GGQHVNTTDSAVRITH+PT I+V   
Sbjct: 176 SFVSCDVTPEMSDDVDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNIIVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ +NR  AMK+L+++LY +E ++   E    R  Q  IG G    +IR+Y F    
Sbjct: 236 NERSQIKNREAAMKMLKSKLYQLEVEKQRQELDDIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +      + V+ G I+  I+  L + 
Sbjct: 293 MVKDHRTDKETGNTQAVMDGDINPFIDAYLRSQ 325


>gi|47093711|ref|ZP_00231463.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
           H7858]
 gi|254992782|ref|ZP_05274972.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-064]
 gi|47017905|gb|EAL08686.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
           H7858]
 gi|328465115|gb|EGF36383.1| peptide chain release factor 2 [Listeria monocytogenes 1816]
          Length = 327

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 105/333 (31%), Positives = 175/333 (52%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M +    +      +     +        +   ++E++ +     ++ +   +    +L 
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     +              L+  D  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  KDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 SEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+THIP+GI+V   
Sbjct: 176 SFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N     ++ V+ G +D+ IN  L + 
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 325


>gi|322420980|ref|YP_004200203.1| peptide chain release factor 2 [Geobacter sp. M18]
 gi|320127367|gb|ADW14927.1| Peptide chain release factor 2 [Geobacter sp. M18]
          Length = 371

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 178/344 (51%), Gaps = 11/344 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + D K R  E++   +     +      +   A + +   ++ ++   ++ +D+  +I 
Sbjct: 24  DVDDKKERMQELDELTNRPDFWNDAENAQKVLKARTAMEKDVTAWENLDRQARDIRELIE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + + +  +    EV A+  E+    ++  +  +     D     + I +G GG+E+  
Sbjct: 84  LGSEEED--EATLAEVAAMNAELENGVSQAEFRRMLSGPHDASGAFVSINSGAGGTESQD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY RY   + W+ E+    + D  G K +    +G   +  +K ++G+HR+ R
Sbjct: 142 WAEMLLRMYLRYCEKKGWRTEITDYQEGDGAGIKGVTFAATGEFAYGYLKADAGIHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIP--LEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   ++S R HTS A+V V P   E D+++     D+RIDT R+SG+GGQHVNTTDSA+R
Sbjct: 202 ISPFDSSARRHTSFASVFVFPVIEEEDIEVKIAESDLRIDTYRSSGAGGQHVNTTDSAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDR 302
           ITH+PTGI+V   SE+SQH N+  AMKVLR++LY++E +    + S     K +IG G  
Sbjct: 262 ITHLPTGIVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAGEKKEIGWG-- 319

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y       + D R  +     + VL G +DD + P L 
Sbjct: 320 -SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALDDFVVPFLM 362


>gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
 gi|24638158|sp|Q9JWV4|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
 gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE
           2594]
          Length = 367

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|54023021|ref|YP_117263.1| peptide chain release factor 1 [Nocardia farcinica IFM 10152]
 gi|61214587|sp|Q5Z0Z2|RF1_NOCFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54014529|dbj|BAD55899.1| putative peptide chain release factor 1 [Nocardia farcinica IFM
           10152]
          Length = 356

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 147/333 (44%), Positives = 202/333 (60%), Gaps = 17/333 (5%)

Query: 9   ICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I D+    A +E ++++        A  ++ + +A ++PI++     +  + +      +
Sbjct: 7   IDDILAEHAGLETQLADPTLHNDPSAARRVGKRFAELAPIMATYRKLESARADLTAAREL 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D  S          EV  +E+++ ELE  +  LL P+D  D    +LE+++G GG E+
Sbjct: 67  AADDAS-------FAAEVPELERQVDELEQALADLLAPRDPHDGDDVVLEVKSGEGGEES 119

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----VFSRMKFES 180
           ALF  DL RMY RYA  R W+VEVL ++ +D GGYKE   +I  R      V+SR KFE 
Sbjct: 120 ALFAADLARMYMRYAERRGWRVEVLDATVSDLGGYKEATLSIKSRDAARDGVWSRFKFEG 179

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GR+HTSAA V + PE  E  +V I   D+RID  R+SG GGQ VNT
Sbjct: 180 GVHRVQRVPVTESQGRIHTSAAGVLIYPEPDEVAEVQIDESDLRIDVYRSSGKGGQGVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL  +  ++   E +A R  QI 
Sbjct: 240 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEQEAAAGRASQIR 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYV 331
           + DRSERIRTYNF + RITDHRI    + L+ V
Sbjct: 300 TVDRSERIRTYNFPENRITDHRIGYKSHNLDAV 332


>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
 gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
           43734]
 gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
 gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
           43734]
          Length = 377

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 106/356 (29%), Positives = 170/356 (47%), Gaps = 9/356 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI- 66
            + +L +R  E+E + ++    D      +  + +S + SK+      +Q   DL  +  
Sbjct: 24  DLDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGLRQRLDDLPVLYD 83

Query: 67  ---GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               +   D +    A        +E+R+    +    +     D++  +L IR+  GG 
Sbjct: 84  MAEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDEREAVLNIRSAAGGV 143

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA +   L RMY R+A     KVEV   S  ++ G K     I G  ++  +  E G H
Sbjct: 144 DAADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEYMYGTLSVEQGTH 203

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +  GR  TS A V VLP       +DI   D+R+D  R+SG GGQ VNTTDS
Sbjct: 204 RLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIDENDVRVDVYRSSGPGGQSVNTTDS 263

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH+PTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A +    GS  
Sbjct: 264 AVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAEMDALKGD--GSNS 321

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
              ++R Y     + + D R N+ +     VL G +D  +   +    A+   + +
Sbjct: 322 WGNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFLEAGIRWRMAQQQEAQA 377


>gi|16801714|ref|NP_471982.1| peptide chain release factor 2 [Listeria innocua Clip11262]
 gi|16415189|emb|CAC97879.1| prfB [Listeria innocua Clip11262]
          Length = 327

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 107/333 (32%), Positives = 175/333 (52%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M +    +      +     +        +   ++E++ +     ++ +   +    +L 
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     +              L+  D  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  KDIKAYVATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 SEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE   EI++++  ED++IDT RA+G+GGQH+NTTDSAVR+THIP+GI+V   
Sbjct: 176 SFVSVDVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 325


>gi|288554120|ref|YP_003426055.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4]
 gi|288545280|gb|ADC49163.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4]
          Length = 328

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 108/328 (32%), Positives = 175/328 (53%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     D            + +  +++++ + +++ ++L         +++     ++E
Sbjct: 1   MTAPDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYELVKEEADEELEKELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               E   R   N+    LL  +  D  + ILE+  G GG+E+  +   L RMY R++  
Sbjct: 61  AGVKELISRL--NDFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWSEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE    +++DI  ED+++DT RASG+GGQH+NTTDSA+RITH+PT  +V   SE+
Sbjct: 179 SCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRITHLPTNTVVTCQSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR +AMK+L+A+LY +E ++   E +  R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRDQAMKMLKAKLYQLEIEKQQQELAEIRGEQKEIGWG---SQIRSYVFHPYSLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N  +     V+ G +D  IN  L 
Sbjct: 296 DHRTNFEIGNTNAVMDGDLDGFINAYLR 323


>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
 gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
           xylanophilus DSM 9941]
          Length = 366

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 123/368 (33%), Positives = 190/368 (51%), Gaps = 29/368 (7%)

Query: 6   HKQICDLKNRFAEIEL----------------RMSESPSVDAYIKLTEEYAAISPIISKI 49
            ++I DL  R  E+E                  MS     D   +     A  S    ++
Sbjct: 5   REKISDLSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDRL 64

Query: 50  SIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
            + ++ +   +D   ++     D E+ +  + E+  IE+ I E E       L     D+
Sbjct: 65  KLMEELRGRLEDSSELLELAEGDRELLEEVERELEGIERRIEEQEV----ARLFTGEYDE 120

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
              IL I +G GG ++  +   L RMY R+A  R + +EV+  ++ ++ G K    ++SG
Sbjct: 121 GDAILTINSGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVSG 180

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMR 228
              F  +  E GVHR+ R+   +AS R HTS A+VAV P   + ++V+I  +D+++DT R
Sbjct: 181 PYAFGLLSAERGVHRLVRISPFDASSRRHTSFASVAVAPAIDDAVEVEIDEKDLKVDTYR 240

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG+GGQHVN TDSAVRITH+PTGI+V   +E+SQHQNR  A++VL+ARL+++ER++   
Sbjct: 241 ASGAGGQHVNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKREQ 300

Query: 288 ERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           E +A    K +IG G    +IR+Y     R + D R       ++ VL G +D  I   L
Sbjct: 301 EIAAQSGEKAEIGWG---SQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYL 357

Query: 345 TAH-QAKM 351
               QA  
Sbjct: 358 KRRAQAAR 365


>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
 gi|6225943|sp|O67695|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
          Length = 373

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 114/353 (32%), Positives = 190/353 (53%), Gaps = 14/353 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
             L++   E++ +MSE    +   K  +       +   ++     ++  +DL  ++   
Sbjct: 27  EKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETLNKLKNLEKSVKDLEELVEIT 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D+E   +   E+  +E+ +RELE             D K+  L I+AG GG+EA  +
Sbjct: 87  SEEDTETWAMMDEEIKEVERTLRELEL----KTYLSGEMDAKNAYLTIQAGAGGTEACDW 142

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              LFRMY+R+A  + ++VE++  + +D  G K +   + G   +  +K E GVHR+ R+
Sbjct: 143 ADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPYAYGYLKGEQGVHRLVRI 202

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ R HTS A V+V+P+  E   ++I  ED++I+T RASG+GGQ+VN TD+AVRIT
Sbjct: 203 SPFDANARRHTSFAAVSVMPQIDEDIKIEIKPEDLKIETFRASGAGGQYVNKTDTAVRIT 262

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD--VERKRMANERSANRKLQIGSGDRSE 304
           HIPTGI V    E+SQ+QN+ +A+++L+A+LY   +++     ++    K  IG G    
Sbjct: 263 HIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEKKKQYEGEKTDIGWG---H 319

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +IR+Y F   + I D R       +E V+ G ID+ I   L   +A+    +S
Sbjct: 320 QIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKW-KAQKEKESS 371


>gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 367

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+++L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIDILEEDDGEIAGINRATIRLEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|251782076|ref|YP_002996378.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390705|dbj|BAH81164.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 331

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 105/336 (31%), Positives = 182/336 (54%), Gaps = 12/336 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + S    +   ++   +    +     D  ++D  
Sbjct: 2   EHQMTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +  +  + + +   E      LL  +  D  + ILEI  G+GG+EA  +   LFRMY R+
Sbjct: 62  EASLETLGQILASYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRF 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+
Sbjct: 178 SFVSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVAST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RA+K+L+A+LY +E+++ A E +A +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            + DHR N  + +++ V+ G I+  I+  L    + 
Sbjct: 295 MVKDHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMSD 330


>gi|254510235|ref|ZP_05122302.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
 gi|221533946|gb|EEE36934.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
          Length = 375

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 110/333 (33%), Positives = 166/333 (49%), Gaps = 5/333 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  I  Y+  K +  D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYESIKTDLSDNIELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +   E    +   +    +     L     D     LEI +G GG+E+  +   L R
Sbjct: 91  GEVVQDAEDAIQKLRAK--SAKKELEALLDGEADSNDTFLEINSGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + + VE+ S +  ++ G K     I+G   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH+PTGI
Sbjct: 209 AKRHTSFCSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHLPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY  E  R   + +A  + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHEAK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + + D R N      + VL G +D  +   L 
Sbjct: 328 YQMVKDLRTNHETSDTKGVLDGDLDGFMAATLA 360


>gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica ST-640]
 gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06]
          Length = 367

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVVGLSEDPELWNDQKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V      + +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae
           KM-6054]
          Length = 351

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 109/356 (30%), Positives = 173/356 (48%), Gaps = 15/356 (4%)

Query: 3   FLSHK---QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
             S +    +  ++   A +E   +     D      +  + +S +  ++   +  +   
Sbjct: 1   MSSIEAVLDLDKIRADIATLEEEAAAPTLWDDVANAQKVTSRLSFLQGELRKVETLRGRV 60

Query: 60  QDLHTV--IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +DL  +  + +   D++ R  A+ E+++++K + ELE       L     D +  ++ IR
Sbjct: 61  EDLGVLFELAEAEDDADTRTEAEAELVSVQKAVEELEV----RTLLSGEYDAREALVNIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           A  GG +AA F   L RMY R+A    +  EV  +S  ++ G K    T+     +  + 
Sbjct: 117 AEAGGVDAADFAEQLMRMYLRWAERHGYPTEVYDTSYAEEAGIKSATFTVKSPYAYGTLS 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQH 236
            E G HR+ R+   +  GR  TS A V VLP       VDI   D+RID  RASG GGQ 
Sbjct: 177 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVDIDEGDLRIDVYRASGPGGQG 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    ER+A   L
Sbjct: 237 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQE---ERAAMDAL 293

Query: 296 QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           + G      ++R+Y     + + D R    +   + VL G ID  I   +   + +
Sbjct: 294 KDGGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPQGVLDGDIDGFIEAGIRWRKQR 349


>gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
 gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
          Length = 338

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 176/344 (51%), Gaps = 16/344 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT---VIGD 68
           ++   AE E +M+E    D      +  +  +        +    +E +++     ++ +
Sbjct: 1   MEEDIAEAEAKMAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
               +   +            + E        +L     D  + I+E+  G GG+E+  +
Sbjct: 61  EPDAAMQEEAE-----TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    ++VE L     D+ G K +   I G   F  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ R HTS  +V V+PE    ID++I  +D++IDT RASG+GGQH+N T+SAVRIT
Sbjct: 176 SPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRIT 235

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           H+PTG +V + +++SQ +NR +AM +L+A+LY +E ++   E +A R  Q  IG G    
Sbjct: 236 HLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWG---S 292

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F     + DHR N+    ++ V+ G +D  I+  L  H
Sbjct: 293 QIRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKMH 336


>gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 417

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 172/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K R  E+     +    +      ++ +E   +  ++  +       ++ + L  +  +
Sbjct: 82  KKERLEEVIGLSEDPELWNDPKRAQEIGKERKLLEGVVLTLDNIGGGIEDNRMLIEMAVE 141

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N      +     + +   E+      + +  +     D  +C ++I AG GG+EA  +
Sbjct: 142 END-----EDGFAAIESDVAELESQMAGLEFKRMFNQPADHNNCFVDITAGAGGTEAEDW 196

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E++   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 197 AGMLFRMYSRYAERKGFKLEIIEEDDGEIAGINRATLRVEGEYAYGLLRTETGVHRLVRY 256

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE     +++I   D+R DT RASG+GGQH+N TDSAVRIT
Sbjct: 257 SPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRIT 316

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           HIPTGI+V + S +SQH+NR   M++LR++L+++E ++   E+ A    K  +G G    
Sbjct: 317 HIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEGKADVGWG---S 373

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 374 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 415


>gi|54294665|ref|YP_127080.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens]
 gi|53754497|emb|CAH15981.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens]
          Length = 335

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 169/337 (50%), Gaps = 15/337 (4%)

Query: 17  AEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   +  S   D       L  E   +  I+  +S   Q   ++ +L  +  + + + 
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQSELFELAREEDDEQ 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            I D+ +       K I +    + +  +     D  +  L+I+AG+GG+EA  +   L 
Sbjct: 62  TINDIGEE-----LKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLL 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+     +  E++  S  +  G K      +G   F  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
             R HTS A V V PE  +         D+RIDT RASG+GGQHVN TDSAVRITHIP+G
Sbjct: 177 GNRRHTSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSG 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
           I+V   +++SQH+N+ +AMK LRA+LY++E ++   E+ A    K  IG G    +IR+Y
Sbjct: 237 IVVQCQNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              Q RI D R  +     + VL G +D  I   L A
Sbjct: 294 VLDQSRIKDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|77918851|ref|YP_356666.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
 gi|77544934|gb|ABA88496.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
           carbinolicus DSM 2380]
          Length = 326

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 106/330 (32%), Positives = 177/330 (53%), Gaps = 16/330 (4%)

Query: 23  MSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS        D    + +E   +  +++      Q+ ++ Q L  +  +   ++ + +++
Sbjct: 1   MSRPGFWESGDQAQDILKERTGLEKLVTSFRESQQELEDLQLLADLGAESGDEATLEEIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
            +       +++   +++ +  +     D    I  I AG GG+EA  +   L RMY RY
Sbjct: 61  AL-----LPDLQRRVDKMEFARMLSGEHDSCDAIFSINAGAGGTEAQDWADMLLRMYMRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +K E+      D+ G K    T+SG   +  ++ E G+HR+ R+   +++ R HT
Sbjct: 116 FEKKGFKAELTDHQPGDEAGIKGATLTVSGDYAYGWLRAEIGIHRLVRISPFDSNARRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V PE   +++VDI  +D+++DT R+SG+GGQHVN TDSA+RITH+P+GI+V   
Sbjct: 176 SFCSVFVFPELPDDVEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGIVVACQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR 315
           +E+SQH+NR  AMK L+ARLY++E ++   E SA    K++IG G    +IR+Y     R
Sbjct: 236 NERSQHKNRATAMKQLKARLYELELRKKEEEASAIAGEKMEIGWG---SQIRSYVLHPYR 292

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            + DHR N      + VL G +D  I   L
Sbjct: 293 MVKDHRTNFESGNADAVLDGDLDGFIEAYL 322


>gi|83311912|ref|YP_422176.1| peptide chain release factor 2 [Magnetospirillum magneticum AMB-1]
 gi|123541518|sp|Q2W3F8|RF2_MAGMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|82946753|dbj|BAE51617.1| Protein chain release factor B [Magnetospirillum magneticum AMB-1]
          Length = 371

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 160/345 (46%), Gaps = 16/345 (4%)

Query: 15  RFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  E+          +      K+  E   +   I      +++  +  +L  +      
Sbjct: 31  RLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGCRALERELADLAELIELGEMEGD 90

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
            + I D  +      E+  +          L     D   C +EI AG GG+E+  +   
Sbjct: 91  QTVIDDAEEQVRALKERAAKM-----ELETLLSGEADHNDCYMEINAGAGGTESQDWAEM 145

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A    +KVE L  S  +  G K     I G   +  +K ESGVHR+ R+   
Sbjct: 146 LLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYGWLKTESGVHRLVRISPY 205

Query: 192 EASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS ++  V P     ID+ I   + RIDT RASG+GGQH+N TDSAVRITHIP
Sbjct: 206 DSAARRHTSFSSAWVYPVIDDTIDIQINESECRIDTYRASGAGGQHINKTDSAVRITHIP 265

Query: 251 TGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIR 307
           TGI +    E+SQHQNR RA  +LRARLY+ E ++         ++K  IG G    +IR
Sbjct: 266 TGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQKTDIGWG---HQIR 322

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +Y     + + D R N+     + VL G +D  +   L A     
Sbjct: 323 SYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAARVQGQ 367


>gi|311031920|ref|ZP_07710010.1| peptide chain release factor 2 [Bacillus sp. m3-13]
          Length = 326

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 107/331 (32%), Positives = 162/331 (48%), Gaps = 16/331 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS     +              +   + +     +  +  Q  + ++ +        +L 
Sbjct: 1   MSNPEFWNNQSSAQVVINEANALKEPVGQFHELSENYENLQLTYELVKEEPDAELQAELG 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  E   +         LL     D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKTVAEDFNK-----FELQLLLSGEHDKNNAILELHPGAGGTESQDWGSLLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AERKGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++DI  ED++IDT RASG+GGQH+NTTDSAVRITH+PT ++V   
Sbjct: 176 SFVSCEVMPEFDDNIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ +NR RAMK+L+A+LY  +      E    R  Q  IG G    +IR+Y F    
Sbjct: 236 TERSQIKNRERAMKMLQAKLYQKKLDEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + DHR N  +   + V+ G +D  I+  L 
Sbjct: 293 MVKDHRTNTEVGNTQAVMDGDLDPFIDAYLR 323


>gi|71733798|ref|YP_276012.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71554351|gb|AAZ33562.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 368

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 170/344 (49%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               +R  E+   + +    +      +L  E + ++ I+  +        + +DL  + 
Sbjct: 31  DHKHDRLTEVNRELEDPNVWNNPTYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMS 90

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +    + + D+A       E   +     + +  +     D  +  L+I+AG+GG+EA 
Sbjct: 91  AEEEDQAAVDDVAAEVERLRESLEK-----LEFRRMFSGEMDPNNAYLDIQAGSGGTEAQ 145

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +   ++  S  +  G K     I G   F  ++ E GVHR+ 
Sbjct: 146 DWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLV 205

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS + V V PE  +  ++DI   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 206 RKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNTTDSAVR 265

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH N+  AMK+LRARLY+ E ++     +   + K  IG G  
Sbjct: 266 ITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWG-- 323

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R N+     + VL G ID+ +   L  
Sbjct: 324 -HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 366


>gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 338

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 187/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E +M+E    +  +   +    ++ +      +   ++   +    +   + 
Sbjct: 1   MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETELYLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  +  + + +   E      LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSVKEELEASLTRLSQMLASYE----MTLLLSEPYDHSNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY R+   + +KVE L     D+ G K +  +I G   +  +K E GVHR+ R+   
Sbjct: 117 LFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR N  + +++ V+ G I+  I+  L     +
Sbjct: 294 SYVFTPYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWRMGE 337


>gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316]
 gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316]
 gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC
           13813]
          Length = 337

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 187/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E +M+E    +  I   +    ++ +  K   +   ++   +   ++   + 
Sbjct: 1   MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  ++     + ++       LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSLKEELEENLMQ----LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS A+V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V+S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR
Sbjct: 237 TGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR N  L +++ V+ G I+  I+  L      
Sbjct: 294 SYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 337


>gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
 gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
          Length = 367

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 175/342 (51%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +      ++ +E   +  I+  +       ++ + L  +  +
Sbjct: 32  KKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N +          V     E+ +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  ENDEE-----GFAAVQEDVAELEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G LFRMY RYA  + +K+E+L   D +  G       + G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE  +  +++I   D+RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQH N+  AM++L+++LY++E ++   E+ A    K  +G G    
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R    +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|84684982|ref|ZP_01012882.1| peptide chain release factor 2 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667317|gb|EAQ13787.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2654]
          Length = 375

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 11/344 (3%)

Query: 13  KNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           ++R  E+     +    +      KL  E  ++   +      +Q+K +  +L  +    
Sbjct: 29  EHRLEELNAMTEDPELWNDPDRAQKLMRERQSLVAQMDGYKAMEQEKNDSVELIELGEME 88

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           + D  ++D          K ++E         L     D     LE+ +G GG+E+  + 
Sbjct: 89  DDDEVVKDAEAA-----LKALKERAAAAEIEALLNGEADPNDTFLEVHSGAGGTESCDWA 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +KVE+ S++  ++ G K     ISG   +  +K ESGVHR+ R+ 
Sbjct: 144 SMLARMYVRWAEAHGYKVELQSTTPGEEAGIKSATYKISGHNAYGWLKSESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS ++V V P     I+V++   DIRIDT R+SG+GGQHVNTTDSAVRITH
Sbjct: 204 PYDSAARRHTSFSSVWVYPVVDDNIEVEVAPNDIRIDTYRSSGAGGQHVNTTDSAVRITH 263

Query: 249 IPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           IPTGI+VTSSEKSQHQNR  AMK L++RLY +E  R     +   + + G      +IR+
Sbjct: 264 IPTGIVVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNQAINEAHENK-GDAGWGNQIRS 322

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           Y     + + D R +      + VL G +D ++   L    A  
Sbjct: 323 YVLQPYQMVKDLRTSFETSDTQGVLDGDLDGLMAATLAMDVAGK 366


>gi|227549373|ref|ZP_03979422.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078558|gb|EEI16521.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 365

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 164/346 (47%), Gaps = 10/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L  R  E+E + ++    D      +    +S + +++      ++   DL  +  
Sbjct: 24  DLDELAARARELEQQANDPSLWDDPAHAQKVTTELSNVQARLKKVASLRERIDDLPVMYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + E        V      + E    +    +     D++  ++ IR+G GG +AA 
Sbjct: 84  LAEEEGEP-----ALVDDELAALEESIGSLEVQTMLSGEYDEREAVVNIRSGAGGVDAAD 138

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KVEV   S  ++ G K     + G  ++ ++  E G HR+ R
Sbjct: 139 WAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVRGEYMYGQLSVEQGAHRLVR 198

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       +DIP  DIR+D  R+SG GGQ VNTTDSAVRI
Sbjct: 199 ISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDSDIRVDVYRSSGPGGQSVNTTDSAVRI 258

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +EKSQ QN+  A+ VL+++L + +R+    E  A      G+     +
Sbjct: 259 THLPTGIVVTCQNEKSQIQNKASALGVLQSKLLERKRQEEKAEMDAL--GAGGNASWGNQ 316

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R N  +   + VL G ID  +   +    A+
Sbjct: 317 MRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWRMAE 362


>gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
 gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
          Length = 327

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 115/328 (35%), Positives = 171/328 (52%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MSE+   +   K        + +   ++ Y +  +  ++L         D +     ++E
Sbjct: 1   MSEADFWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKEDYDEELHVELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                   +  E E+  L    +  D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 61  KELKNLTKQFNEFELQLL--LSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  E  D+DI  EDI++DT RASG+GGQHVNTTDSAVRITHIPT ++V   +E+
Sbjct: 179 SCDVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR RAMK+L+++LY    +    E    R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRERAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N  +  ++ V+ G +D  I+  L 
Sbjct: 296 DHRTNTEMGNVQAVMDGDLDSFIDAYLR 323


>gi|159043721|ref|YP_001532515.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
 gi|157911481|gb|ABV92914.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
          Length = 375

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 110/339 (32%), Positives = 168/339 (49%), Gaps = 5/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E +  + +    +   +  +       ++  +  Y+  KQE +D   +I     +++
Sbjct: 31  RLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVDAMKTYEGIKQELEDNIELIELGEMEAD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +   E             +     L     D     LEI +G GG+E+  +   L R
Sbjct: 91  AEVVTDAEEALKSLAETA--AKKEIEALLDGEADGNDTFLEINSGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + + VE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISGPNAYGWLKSESGVHRLVRISPYDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS ++V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH+PTGI
Sbjct: 209 ARRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHVPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           + TSSEKSQHQNR  AMK L++RLY +E  R     +   + + G      +IR+Y    
Sbjct: 269 VTTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEAK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R          VL G +D +++  L    A  
Sbjct: 328 YQMVKDLRTGYETSDTAGVLDGDLDGLMSATLAQQVAGK 366


>gi|104780459|ref|YP_606957.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
 gi|95109446|emb|CAK14147.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
          Length = 364

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
               +R  E+   + ++   +       L  E A ++ ++  +        + QDL  + 
Sbjct: 27  DHKHDRLVEVNRELEDAAVWNKPEYAQALGRERAMLAQVVETLDKLSGGLADCQDLLDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N +  + D+         + + E   ++ +  +     D  +  L+I+AG+GG+EA 
Sbjct: 87  VEENDEGAVGDVVTE-----LEGLEEKLAQLEFRRMFSGEMDMNNAYLDIQAGSGGTEAQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +   ++  S+ +  G K     I G   F  ++ E GVHR+ 
Sbjct: 142 DWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS + V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 202 RKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQHVNTTDSAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITH+PT  +V   +E+SQH N+  AMK+LRA+LY++E ++     +   + K  IG G  
Sbjct: 262 ITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWG-- 319

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  +   L  
Sbjct: 320 -HQIRSYVLDDSRIKDLRTGVERSDCQKVLDGDLDQYLEASLKQ 362


>gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
 gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
          Length = 361

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 169/345 (48%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYA---AISPIISKISIYDQKKQEEQDLHT 64
            +  L+   A  E  MSE    D   K  +       +  I       +   +E   L  
Sbjct: 12  DLDRLEEDIAAYEQEMSEPSFWDDSEKANQVIQKNNELKSIYDTFHKMELAHEETSLLFE 71

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   +    ++ +         + +        +L     D  S ILEI  G GG+E
Sbjct: 72  MYKEEPDEEVHAEIVEAIQ-----SLEKDLQRYELSMLLNGPHDKNSAILEIHPGAGGTE 126

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A    ++VE +   D D+ G K +  +I G   +  ++ E GVHR
Sbjct: 127 SQDWGSMLLRMYMRWAEKHGYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSEKGVHR 186

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+G+ HTS  +V V+P+   +ID++I  +D+++D  RASG+GGQH+N T SA
Sbjct: 187 LVRISPFDAAGKRHTSFCSVDVVPQMDGDIDIEINPDDLKVDVYRASGAGGQHINKTSSA 246

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+  + +++SQ +NR +AM +L+A+L+ +E ++ A E +A R  Q      
Sbjct: 247 VRITHIPTGIVTQSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAIRGEQ-KDIAW 305

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR Y F     + D R       +  V+ G +D  ++  L  
Sbjct: 306 GSQIRNYVFHPYSMVKDLRSGYETGNIGAVMDGDLDSFMDAYLKW 350


>gi|115311855|sp|Q49VV3|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 373

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 104/353 (29%), Positives = 175/353 (49%), Gaps = 17/353 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHT 64
            +   +    E E  M++    D   K  +      A+  +++     + + ++      
Sbjct: 25  DLEAKETNIQEYEEMMTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRA 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ + + ++  +DL Q       +  +         LL     D  + I+E+  G GG+E
Sbjct: 85  LLLEEDDETMKQDLEQSVQDFKNELDQ-----FELQLLLDGPYDANNAIMELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+RY   + + VE+      D+ G K +   + G   +  +K E GVHR
Sbjct: 140 SQDWTNMLLRMYQRYCEQKGFNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           + R+   ++SGR HTS A+  V+P+      ++DI  +DI +DT RASG+GGQH+N T+S
Sbjct: 200 LVRISPFDSSGRRHTSFASCDVIPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTES 259

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGS 299
           A+RITH PTGI+V   +E+SQ +NR  AMK L+++LY ++ +    E +  R  Q  IG 
Sbjct: 260 AIRITHHPTGIVVNNQNERSQIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGEQKEIGW 319

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           G    +IR+Y F     + DHR N    K++ V+ G I   I   L +   + 
Sbjct: 320 G---SQIRSYVFHPYAMVKDHRTNEETGKVDAVMDGDIGPFIEAFLRSQMDQH 369


>gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 329

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 183/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             ++  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VEQLTELDKMMANYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +     G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLFFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWR 327


>gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42]
 gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42]
          Length = 327

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 115/328 (35%), Positives = 169/328 (51%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +   K        + +   ++ Y Q  +  ++L         + +     ++E
Sbjct: 1   MAEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKEEPDQDLQQELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                      E E+  L    +  D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 61  KELKSLTKELNEFELQLL--LSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  E  D+DI  EDI++DT RASG+GGQHVNTTDSAVRITH+PT ++V   +E+
Sbjct: 179 SCEVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR RAMK+L+A+LY    +    E    R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 296 DHRTNTEMGNVQAVMDGDIDIFIDAYLR 323


>gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift
           [Thermomicrobium roseum DSM 5159]
 gi|254790922|sp|B9L0E3|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift
           [Thermomicrobium roseum DSM 5159]
          Length = 374

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 178/342 (52%), Gaps = 8/342 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +   + +  ++E   ++        +       +S +   +  ++   Q+ +DL  +   
Sbjct: 25  LPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQEWETLSQQARDLLELRAL 84

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D E+    + E   + + +R+LE      LL     D    IL + AGTGG +A  +
Sbjct: 85  ASDDLELAGQVEQEATELAERVRQLEL----RLLLTGQYDGHDAILAVHAGTGGVDAQDW 140

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    +  EV+   + ++ G K     + G   +  +K E+G HR+ R+
Sbjct: 141 AEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPYAYGYLKGEAGTHRLVRL 200

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ R HTS A V VLP    + DV+I  EDIRIDT RASG GGQHVN T+SAVRIT
Sbjct: 201 SPFDAAHRRHTSFALVEVLPLVEEDDDVEIREEDIRIDTFRASGHGGQHVNKTESAVRIT 260

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +E+SQ QNR  AMK+L+ARL +++ ++   E++  +   + +G    RI
Sbjct: 261 HLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEEQARLKGKPVVTG-WGNRI 319

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y       +TDHR  ++   ++ VL+G ID  I   L   
Sbjct: 320 RSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYLHQQ 361


>gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
 gi|166225114|sp|A6Q582|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
          Length = 368

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 188/360 (52%), Gaps = 23/360 (6%)

Query: 6   HKQICDLK---------NRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYD 53
            ++I ++K          R  EIE   +     +   K   + +E   +S I+ K     
Sbjct: 14  EQKIENIKNIIKPDLITKRLKEIEQLENSPDFWNDAKKAGEIQKEKNRLSRILEKFEEAR 73

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
              ++ +DL  +  +              +      + E  N+I    +    +DDK+ I
Sbjct: 74  SSVEDAKDLFEMATEEEDTE-----TLNMLFEEAPTLEEKVNKIEIETMLSGENDDKNAI 128

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           + I  G GG+E+  +   L+RMY R+A    +KVEVL   + ++ G K++   I G   +
Sbjct: 129 VTIHPGAGGTESQDWASILYRMYLRWAERHGFKVEVLDYQEGEEAGIKDVSFIIKGENAY 188

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGS 232
             +K E+G+HR+ R+   +++ R HTS A+V V PE  +     I  +DIR+DT RASG+
Sbjct: 189 GYLKAENGIHRLVRISPFDSNARRHTSFASVMVSPEVDDDINIVIEDKDIRVDTYRASGA 248

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN TDSA+RITHIPTGI+V   +++SQH+NR  AMK+L++RLY++E ++   E+  
Sbjct: 249 GGQHVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELEKKRAEQEG 308

Query: 292 NRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             K  IG G    +IR+Y  +   ++ D R N     +E +L G ID II  +L A   K
Sbjct: 309 IEKSDIGWG---HQIRSYVLAPYQQVKDTRSNKAYSNVEAILDGDIDKIIEDVLIAEAEK 365


>gi|295115079|emb|CBL35926.1| bacterial peptide chain release factor 2 (bRF-2)
           [butyrate-producing bacterium SM4/1]
          Length = 333

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 172/330 (52%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    D      +L  E   +   +      +Q+ ++ Q +  +  + N  S I +  
Sbjct: 1   MEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEENDPSLIPE-- 58

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 ++  + +LE      LL  + D+  + IL++ AG GG+EA  +   L+RMY+R+
Sbjct: 59  --IQGMMDDFVEKLEAIRIQTLLSGEYDN-NNAILKLNAGAGGTEACDWCSMLYRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +   V+   D ++ G K I   I+G   +  +K E GVHR+ R+    ++G+  T
Sbjct: 116 ADKKGFTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+P+  E  DV++  +++RIDT R+SG+GGQH+N T SA+RITH+PTGI+V   
Sbjct: 176 SFVSCDVMPDIKEDLDVEVNPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QN+  AM++L+ +LY ++++  A + S  R   +   +   +IR+Y       +
Sbjct: 236 NERSQFQNKEVAMQMLKTKLYMMKQEEHAEKLSDIR-GDVKDINFGNQIRSYVMQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR       +  VL G ID  I+  L  
Sbjct: 295 KDHRTGAESGNVNAVLDGDIDLFISAYLKW 324


>gi|254831068|ref|ZP_05235723.1| peptide chain release factor 2 [Listeria monocytogenes 10403S]
          Length = 327

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M +    +      +     +        +   ++E++ +     ++ +   +    +L 
Sbjct: 1   MLDPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     +              L+  D  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  KDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 SEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+THIP+GI+V   
Sbjct: 176 SFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 325


>gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 369

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 18/343 (5%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-IGDH 69
            R  ++E + +     +       +  E   +   I+ I     +  +   L  + I + 
Sbjct: 30  ARLNDLEAQTTMPDFWNDQAVAQDVMREKNRLERQINLIKDMQAEMDDCVALIELGIAEG 89

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           + D      A +  L  E + R+LE       L     D   C LEI AG GG+EA  + 
Sbjct: 90  DDDVVAEAEAVLTKLVTEADKRQLE------SLLSGEADANDCFLEIHAGAGGTEAQDWA 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+   R +KV ++  S  ++ G K +   I G   +  +K ESGVHR+ R+ 
Sbjct: 144 QMLVRMYGRWCEQRGYKVHLIEESAGEEAGIKSVTMRIDGENAYGWLKTESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++S R HTS A+  V P     I++++  +D+RIDT RASG+GGQHVN TDSA+RITH
Sbjct: 204 PYDSSARRHTSFASAWVYPVVDDNIEIEVEDKDLRIDTYRASGAGGQHVNKTDSAIRITH 263

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSER 305
           +PT I+V   +++SQH+NR  A  +L+ARLY++E ++   A   +A  K  IG G+   +
Sbjct: 264 LPTNIVVQCQNDRSQHRNRATAFNMLKARLYELELQKREEAASDAAASKTDIGWGN---Q 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y     + + D R N+     + VL G +D  I   L A 
Sbjct: 321 IRSYVLHPYQMVKDLRTNVEKGNAQGVLDGDLDSFIEASLAAR 363


>gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 366

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 164/346 (47%), Gaps = 9/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  E+EL  ++    D      +  + +S   S +      +Q   DL  +  
Sbjct: 24  DLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQSTLKKVRALRQRVDDLPVMYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + E  +LA  E   + + I  +E +           D++  ++ IR+G GG +AA 
Sbjct: 84  LAEEEGEGTELADDERADLRQAIESMEVQTM----LSGEYDERDAVVTIRSGAGGVDAAD 139

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV+V  +S  ++ G K     +S   ++  +  E G HR+ R
Sbjct: 140 WAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQVSDPYMYGTLSVEQGTHRLVR 199

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVRI
Sbjct: 200 ISPFDNQARRQTSFAEVEVLPVVEKTDHIDIPDSDVRVDVYRSSGPGGQSVNTTDSAVRI 259

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QNR  AM VL++RL + +R+    E  A      G      +
Sbjct: 260 THIPTGIVVTCQNEKSQIQNRASAMAVLQSRLLERKRQEEQAEMDAL--GAGGEASWGNQ 317

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R N  +     VL G ID  +   +    A+
Sbjct: 318 MRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLEAGIRWRMAE 363


>gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150]
 gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150]
          Length = 337

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 187/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E RM+E    +  I   +    ++ +  K   ++  ++   +    +     
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           DS +++  +  +  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DSSVQEELEETLEKLDKIMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY+RY   + +KVE L     D+ G K +     G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR    + +++ V+ G I+  I+  L     +
Sbjct: 294 SYVFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWRMEE 337


>gi|163747048|ref|ZP_02154404.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
 gi|161379609|gb|EDQ04022.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
          Length = 374

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 113/335 (33%), Positives = 171/335 (51%), Gaps = 9/335 (2%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSD 72
           R  E   R+ +    D      +       ++  I  Y+  KQE  D   +I   +   D
Sbjct: 31  RLEEFNARVEDPNLWDNPDAAQKLMRERQSLVDAIDTYEGIKQELADNVELIELGEMEGD 90

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E+   A++ + ++     + E       L     D     LEI +G GG+E+  +   L
Sbjct: 91  EEVIKEAEVALKSLAATAAQKEL----EALLNGEADSNDTFLEINSGAGGTESCDWASML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  + +KV++ + S  ++ G K     I G   +  +K ESGVHR+ R+   +
Sbjct: 147 ARMYVRWAEKKGYKVDLQAESAGEEAGIKSATYKIEGHNAYGWLKSESGVHRLVRISPFD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ + HTS  +V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PT
Sbjct: 207 SAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHHPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSSEKSQHQNR  AMK L++RLY +E  + +   +   +   G      +IR+Y  
Sbjct: 267 GIVVTSSEKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHENA-GDAGWGNQIRSYVL 325

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              + + D R N      + VL G +D ++   L 
Sbjct: 326 QPYQMVKDLRTNYETSDTKGVLDGDLDGLMGATLA 360


>gi|291326803|ref|ZP_06125920.2| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
 gi|291312658|gb|EFE53111.1| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
          Length = 320

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 106/324 (32%), Positives = 176/324 (54%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E +++  I+  I    Q  ++ + L  +  +   D +  + A+ E+  +
Sbjct: 3   NEPERAQALGKERSSLEAIVETIDQMTQGLEDVEGLLELAVEA-DDEDTFNEAEAELEQL 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           E ++ +LE    +  +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K
Sbjct: 62  EGKLEQLE----FRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLLRMYLRWAESKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  SD D  G K     I G   +  ++ E+GVHR+ R    ++ GR HTS ++  +
Sbjct: 118 TEIIEESDGDVAGLKSATVKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFI 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE   +ID++I   D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+
Sbjct: 178 YPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AM+ L+A+LY++E ++   ++      K  IG G    +IR+Y     RI D R  
Sbjct: 238 NKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWG---SQIRSYVLDDARIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D  I   L A
Sbjct: 295 VETRNTQAVLDGDLDKFIEASLKA 318


>gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
 gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
 gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208]
 gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3]
          Length = 327

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 114/328 (34%), Positives = 168/328 (51%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +   K        + +   ++ Y Q  +  ++L         + +     ++E
Sbjct: 1   MAEPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKEEPDQELQQELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                      E E+  L    +  D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 61  KELKSLTKELNEFELQLL--LSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R  KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGCKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  E  D++I  EDI++DT RASG+GGQHVNTTDSAVRITH+PT ++V   +E+
Sbjct: 179 SCEVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR RAMK+L+A+LY    +    E    R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N  +  ++ V+ G ID  I+  L 
Sbjct: 296 DHRTNTEMGNVQAVMDGDIDIFIDAYLR 323


>gi|224035189|gb|ACN36670.1| unknown [Zea mays]
          Length = 301

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 161/299 (53%), Positives = 219/299 (73%), Gaps = 2/299 (0%)

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + L +++ + + + ++R++A+ E+L   +E + L++E+   LLPKD  D+K CILE+RAG
Sbjct: 2   EGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAG 61

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           TGG EA+LF  D+FRMYE+YA    WK +V+   ++   GYKE   TISG G F ++KFE
Sbjct: 62  TGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFE 121

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SG+HRVQRVPATE SGR+HTSA +VAVLP+A E+DV +  ED+RIDT R+ GSGGQ VNT
Sbjct: 122 SGIHRVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGGQSVNT 181

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITHIPTG +V    E+SQH N+ +A+KVLRARLY++ER+R+  +RS  R  QIG
Sbjct: 182 TDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSEQIG 241

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           SGDRSERIRTYNF QGR+TDHR+ +T + +  V++G  +D  ++ LL   +   I S  
Sbjct: 242 SGDRSERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQEEMDAIASFG 300


>gi|119947032|ref|YP_944712.1| peptide chain release factor 2 [Psychromonas ingrahamii 37]
 gi|119865636|gb|ABM05113.1| bacterial peptide chain release factor 2 (bRF-2) [Psychromonas
           ingrahamii 37]
          Length = 329

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 105/332 (31%), Positives = 166/332 (50%), Gaps = 15/332 (4%)

Query: 21  LRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRD 77
             +         +    L +E +A+  ++  I       ++   L  +  + N      +
Sbjct: 3   RELESPEVWSEPERAQALGKERSALELVVDTIDALSAGTEDILMLVEMATEENDQDSFDE 62

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
             +        E+ +    + +  +     D  SC L+I++G+GG+EA  +   L RMY 
Sbjct: 63  AQKE-----VNELEKKLEVLEFRRMFSGNHDACSCYLDIQSGSGGTEAQDWANILLRMYL 117

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+     +K E++  S  D  G K      +G   F  ++ E+GVHR+ R    ++SGR 
Sbjct: 118 RWGEAHGYKTELMEVSAGDVAGIKGATIRFTGEYAFGWLRTETGVHRLVRKSPFDSSGRR 177

Query: 198 HTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           HTS A+  + PE  +  D+ I   D+RID  RASG+GGQHVNTT+SAVRITH+PT I+V 
Sbjct: 178 HTSFASAFIYPEIEDDIDIQINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQ 237

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQ 313
             +++SQH+N+ +AMK L+A+LY+ E ++   E   S + K  IG G    +IR+Y    
Sbjct: 238 CQNDRSQHKNKDQAMKQLKAKLYEHELQKQNAEKQISEDSKSDIGWG---SQIRSYVLDD 294

Query: 314 GRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            RI D R  +     + VL G +D  I   L 
Sbjct: 295 ARIKDLRTGIESRNTQAVLDGGLDKFIEASLK 326


>gi|52842005|ref|YP_095804.1| peptide chain release factor 2 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148359322|ref|YP_001250529.1| peptide chain release factor 2 [Legionella pneumophila str. Corby]
 gi|296107369|ref|YP_003619069.1| Protein chain release factor B [Legionella pneumophila 2300/99
           Alcoy]
 gi|52629116|gb|AAU27857.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148281095|gb|ABQ55183.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila str.
           Corby]
 gi|295649270|gb|ADG25117.1| Protein chain release factor B [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610478|emb|CBX00050.1| hypothetical protein LPW_18051 [Legionella pneumophila 130b]
          Length = 335

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 170/337 (50%), Gaps = 15/337 (4%)

Query: 17  AEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E+   +  S   D       L  E   +  I+  +S   Q   ++++L  +  + + + 
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            I D+ +       K I +    + +  +     D  +  L+I+AG+GG+EA  +   L 
Sbjct: 62  TINDIGEE-----LKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLL 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+     +  E++  S  +  G K      +G   F  ++ E+GVHR+ R    ++
Sbjct: 117 RMYLRWGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDS 176

Query: 194 SGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
             R HTS A V V PE  +         D+RIDT RASG+GGQHVN TDSAVRITHIP+G
Sbjct: 177 GNRRHTSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSG 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
           I+V   +++SQH+N+ +AMK LRA+LY++E ++   E+ A    K  IG G    +IR+Y
Sbjct: 237 IVVQCQNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWG---SQIRSY 293

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              Q RI D R  +     + VL G +D  I   L A
Sbjct: 294 VLDQSRIKDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 348

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 181/342 (52%), Gaps = 10/342 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + D+K +  E++  MS     +   K  +  A  + +  K+   +  +++    +     
Sbjct: 3   LEDIKQKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKIN--YLEEYI 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              + E  + A+ ++    K +  L N+     L     D K+ I+ ++AG+GG EA  +
Sbjct: 61  ELLELEPDEEAKQDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEACDW 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    + VE++    +D  G K     + G   +  ++ E GVHR+ R+
Sbjct: 121 AEMLLRMYLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRLVRI 180

Query: 189 PATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ R HTS A V+V+PE   EI V+I  +D+RIDT RASG+GGQHVN TDSAVRIT
Sbjct: 181 SPFDSNKRRHTSFAAVSVIPEIGEEIKVEINEDDLRIDTFRASGAGGQHVNKTDSAVRIT 240

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSE 304
           HIPTGI+V   SE+SQ QNR +AM++L+A+LY +E ++   +R      K +I  G    
Sbjct: 241 HIPTGIVVSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWG---S 297

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +IR+Y F   + + D R       ++ V+ G ID  +   L 
Sbjct: 298 QIRSYVFHPYQMVKDLRTGYETGNIQAVMDGEIDSFMETYLK 339


>gi|262198721|ref|YP_003269930.1| hypothetical protein Hoch_5555 [Haliangium ochraceum DSM 14365]
 gi|262082068|gb|ACY18037.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
          Length = 378

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 168/345 (48%), Gaps = 6/345 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + + + R  E+E   ++    D   K  +    +  I   +  YD+   +  D   ++ 
Sbjct: 35  DVDEKRLRIEELESISADPAFWDNRQKAEDSLRELKSIKDVVGSYDKLSSKLADAVVLLE 94

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 +     +    A E E    E    +  +     D    +L+I +G GG +AA 
Sbjct: 95  LAEDAEDAESAIEARTAAEEIERSLDEL--EFRRMLSGEYDQGGAVLQINSGAGGVDAAD 152

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RM  RYA  + WK EVL     ++ G K     I+G   +  +K E GVHR+ R
Sbjct: 153 WAQMLLRMILRYADHKGWKAEVLDEQAAEEAGIKSATLVITGEYAYGLLKAEMGVHRLVR 212

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A  R  TS A V V P+  +   VDI   ++RID  RA G+GGQHVN T+SAVRI
Sbjct: 213 ISPFDAQARRQTSFAAVTVSPDIDDSVHVDIDEGELRIDVYRAGGAGGQHVNKTESAVRI 272

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+P+GI+V   +E+SQH+N+  AM+VLR+RLYD  +       +     +    +   +
Sbjct: 273 THLPSGIVVQCQNERSQHKNKASAMRVLRSRLYDYLKAERDAAAAEAAPEKKK-IEWGSQ 331

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           IR+Y  +  R +TDHR +L +  ++ VL G +D  I   L +  A
Sbjct: 332 IRSYVLAPYRQVTDHRTDLKVGNVDAVLDGDLDPFIRTYLLSEGA 376


>gi|307265609|ref|ZP_07547163.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919407|gb|EFN49627.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 330

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 112/330 (33%), Positives = 171/330 (51%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS+        K   L ++  A+  ++ + +    K ++   L  +  +   +S   ++ 
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLEEGDESITDEVD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      +K        +    L     D  + IL I AG+GG+EA  +   L RMY R+
Sbjct: 61  KEYKELKKKLED-----LKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + ++VE +     ++ G K +   I G   +  +K E+GVHR+ R+   +A+GR HT
Sbjct: 116 ANDKGFEVETIDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V VLPE   +I+V+I  ED++IDT RASG+GGQ+VN T+SAVRITH+PTGI+V   
Sbjct: 176 SFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           SE+SQ QNR  AMK+L+A+L D+  K    +     K +        +IR+Y F     +
Sbjct: 236 SERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDL-KGEHREAAWGNQIRSYVFQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N     +  V+ G ID  IN  L  
Sbjct: 295 KDHRTNYEEGNVNAVMDGEIDGFINAYLKQ 324


>gi|319939454|ref|ZP_08013814.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
 gi|319811440|gb|EFW07735.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
          Length = 325

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 100/330 (30%), Positives = 175/330 (53%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  +   +    ++ +      + Q      +   ++     D   ++  + +
Sbjct: 1   MTEPDFWDDNVAAQKTSQELNELKQTYDNFQQMTDLFDESEILLDFLAEDDSFQEELEEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +E  +   E      LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LAELETRMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 HGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I++++  EDI++DT R+ G+GGQ+VN   + VR+THIPTGI+  S+ ++
Sbjct: 177 SVEVMPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR    + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|293977757|ref|YP_003543187.1| bacterial peptide chain release factor 1 [Candidatus Sulcia
           muelleri DMIN]
 gi|292667688|gb|ADE35323.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Sulcia
           muelleri DMIN]
          Length = 352

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 222/342 (64%), Gaps = 8/342 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K+I  LK RF E+   + +   +     Y+KL++EY  I  II+  + Y +KK+  +++ 
Sbjct: 9   KKIEVLKKRFYELSFLIIKPEIIHDNKKYVKLSKEYKIIYKIINYYNSYKEKKKYLKEIE 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++I   +SD E+ + A  E      E+  L  +I YL   K  ++  + ++E+RAGTGG 
Sbjct: 69  SLIKL-SSDKELLEFAIFEKKKNLLELEFLIKKIEYL--LKKNNNTNNVLMELRAGTGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +FV ++FRMY  Y     WK E+L+       GYKEI+  I G+ V+  +KFESGVH
Sbjct: 126 EACIFVENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP+TE+ GR+HTSA TVA+LP E    +++I L D++ +T RASG+GGQHVN T+S
Sbjct: 186 RVQRVPSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTES 245

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+R+THIPTGI+     E+SQH+N  +AMKVLRAR+Y  E K    + S  RK  I +GD
Sbjct: 246 AIRLTHIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNEKLSKERKSLISTGD 305

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPL 343
           RS +IRTYN+ QGR+TDHRIN ++Y L+  + G I+++I  L
Sbjct: 306 RSAKIRTYNYPQGRVTDHRINKSIYYLDKFMNGKINEMITAL 347


>gi|288941013|ref|YP_003443253.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
 gi|288896385|gb|ADC62221.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
          Length = 349

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 169/340 (49%), Gaps = 15/340 (4%)

Query: 13  KNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           K+R  E+   + +    +       L  E A +  ++  I        +  DL  +  + 
Sbjct: 15  KDRLTEVLRELEDPTIWNDPGRAQALGRERATLEAVVLTIDELTGALADADDLLALAAEE 74

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           + ++ +  L         +        + +  +     D  +  ++I+AG+GG+EA  + 
Sbjct: 75  SDEATLESLVADLKSHEARVSE-----LEFRRMFSGEMDACNAFVDIQAGSGGTEAQDWA 129

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+   R +K E++  S  +  G K       G   F  ++ E GVHR+ R  
Sbjct: 130 EMLLRMYLRWGERRGFKTELMEVSAGEVAGIKSATVKFEGDYAFGWLRTEIGVHRLVRKS 189

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++  R HTS ++V V PE  +  +++I   D+RID  RASG+GGQHVN T+SAVRITH
Sbjct: 190 PFDSGNRRHTSFSSVFVSPEVDDSVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITH 249

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
            PTGI+V   +++SQH+N+ +AMK L+++LY++E ++    + A    K  IG G    +
Sbjct: 250 NPTGIVVQCQNDRSQHKNKDQAMKQLKSKLYELEMQKRRASQQALEETKSDIGWG---SQ 306

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR+Y   Q RI D R  + +   + VL G +D  I   L 
Sbjct: 307 IRSYVLDQSRIKDLRTGVEIANTQGVLDGNLDPFIQASLK 346


>gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 371

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 184/340 (54%), Gaps = 6/340 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK+R  ++E +  +    D   +  +    +S +  ++  Y+   +E +D+  ++ 
Sbjct: 25  DVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYESLVREIEDISALLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++ +     +          R  E      ++ K   DD + I+ + AG GG++A  
Sbjct: 85  LAEAEEDEELYREAAAELARLNRRFRE--YELSIMFKGEHDDSNAIVSLHAGAGGTDAQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  L RMY R+A    ++V+++     ++ G K +   I G+  + +M+ E+GVHR+ R
Sbjct: 143 WVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYAYGKMRAEAGVHRLIR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V   +ASGR HTS A V+VLPE  +  +V I  +D+RIDT RA G+GGQHVN TDSAVRI
Sbjct: 203 VSPFDASGRRHTSFALVSVLPEIQDDVEVTISSDDLRIDTFRAGGAGGQHVNKTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+P+GI+V   +E+SQ+ N+L AMK+LRA+LY+++++          K +        +
Sbjct: 263 THLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQKL-KGEYKEIAWGNQ 321

Query: 306 IRTYNFSQ-GRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           IRTY  +    + DHR  L +  +  VL G I+D I   L
Sbjct: 322 IRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYL 361


>gi|46201582|ref|ZP_00208157.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 371

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 160/341 (46%), Gaps = 16/341 (4%)

Query: 15  RFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  E+          +      K+  E   +   I      +++  +  +L  +      
Sbjct: 31  RLDELNASAENPDLWNDAGAAQKIMRERNDLDSAIQGCRALERELADLIELIELGEMEGD 90

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
            + I D  +      E+  +          L     D   C +EI AG GG+E+  +   
Sbjct: 91  QTVIDDAEEQIRAVKERAAKM-----ELETLLSGEADHNDCYMEINAGAGGTESQDWAEM 145

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A    +KVE L  S  +  G K     I G   +  +K ESGVHR+ R+   
Sbjct: 146 LLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATIRILGHNAYGWLKTESGVHRLVRISPY 205

Query: 192 EASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS ++  V P     ID+ I   + RIDT RASG+GGQH+N TDSAVRITHIP
Sbjct: 206 DSAARRHTSFSSAWVYPVIDDSIDIQINESECRIDTYRASGAGGQHINKTDSAVRITHIP 265

Query: 251 TGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIR 307
           TGI +    E+SQHQNR RA  +LRARLY+ E ++         ++K  IG G    +IR
Sbjct: 266 TGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQKTDIGWG---HQIR 322

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y     + + D R N+     + VL G +D  +   L A 
Sbjct: 323 SYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363


>gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT
           12067]
 gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT
           12067]
          Length = 329

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 97/334 (29%), Positives = 165/334 (49%), Gaps = 12/334 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    D   K  +       +   +           + + L  +  + N +S + ++ 
Sbjct: 1   MGDPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAEENDESLLPEMD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           ++ +     E+  LE  +          D  + IL + AG GG+EA  +   L RM+ R+
Sbjct: 61  EL-LAKCRSELEHLELGML----LSGEYDANNAILTLHAGAGGTEAQDWTSMLLRMFTRF 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + +E+L     D+ G K     ++G   +  ++ E GVHR+ R+   +A+ R HT
Sbjct: 116 AEQNGFALEMLDYQPGDEAGVKSATIQVNGHNAYGFLRSEKGVHRLVRISPFDANARRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V V+PE    +DV+I ++++R+D  R+SG+GGQHVN T SAVR+TH PTGI+V   
Sbjct: 176 SFAAVDVMPELDDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QNR R +++LRA+LY+ E+ +     S        + +   +IR+Y F     +
Sbjct: 236 NERSQIQNRERCLQMLRAKLYEYEKAKQDALVSDIA-GDYQNIEWGSQIRSYVFQPYTMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            DHR       ++ V+ G +   +   L + Q K
Sbjct: 295 KDHRTGCETGNIQAVMDGDLMPFVEAYLRSQQKK 328


>gi|284040585|ref|YP_003390515.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74]
 gi|283819878|gb|ADB41716.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74]
          Length = 358

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 92/343 (26%), Positives = 167/343 (48%), Gaps = 11/343 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            + K + AE+E +  +        +       +  +    + Y++   +  DL T+   +
Sbjct: 23  DNKKEQLAELEQQTFQPEFWTDAARAEGVMKQVRGLKGWTTGYEKLNSQFGDLETLFEFY 82

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +     +    E   +   + ELE       +  + +D  S +LEI AG GG+E+  + 
Sbjct: 83  EAGDVTEEEVDEEGRKVTTTLEELEL----KKMLGNEEDQLSAVLEINAGAGGTESQDWA 138

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+A    + ++ +   + D  G K     + G   +  +K E+GVHR+ R+ 
Sbjct: 139 DMLYRMYMRWAEKHGYGLKQVDYQEGDTAGIKSATIEVDGPLAYGFLKSENGVHRLVRIS 198

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS A+V   P     I++++   DI  DT R+ G+GGQ+VN  ++AVR+ H
Sbjct: 199 PFDSNARRHTSFASVYAYPLIDDTINIEVNPADIDWDTFRSGGAGGQNVNKVETAVRLKH 258

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
            P+G+++    E+SQ QN+  A+++L+++LY++E ++    R+     K +I  G    +
Sbjct: 259 KPSGLIIECQQERSQLQNKEVAIRLLKSKLYEIEVQKRNAARAEVEASKQKIEWG---SQ 315

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           IR+Y     R+ DHR        E VL G +D  I   L   +
Sbjct: 316 IRSYVLDDRRVKDHRTGYQTSNTEAVLDGDLDPFIKAFLLEQE 358


>gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
          Length = 391

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 107/336 (31%), Positives = 167/336 (49%), Gaps = 16/336 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           K R   IE ++S+  + D    LT    E   +S  ++      Q K +      +  + 
Sbjct: 50  KTRLEAIEHQLSKPGAWDKPGALTPLLREKTQLSDKLAMYESLAQAKDDLDAWLELAHES 109

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             +      A   +       +E         +     D  + ILEI  G GG E+  + 
Sbjct: 110 RDEE-----AMAGLDGQISVFKERLGITELATMFAFEHDKGNAILEIHPGAGGVESQDWA 164

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + +K+  L     ++ G K +   I G   +  +K ESGVHR+ R+ 
Sbjct: 165 EMLLRMYTRFAERKGFKITQLDYQVGEEAGIKSVTLQIEGLYSYGLLKGESGVHRLIRIS 224

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++SGR HTS A+V V P+  +  ++++  ED+RID  R+SG GGQ VN T SAVRITH
Sbjct: 225 PFDSSGRRHTSFASVDVYPDMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSAVRITH 284

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSER 305
           +PTGI+    +EKSQH+N+  A+++++ARLY+ E +++   R  +   K  I  G    +
Sbjct: 285 LPTGIVAQCQNEKSQHRNKATALRLVKARLYERELQKIEESRRQDYQAKGAIAWG---SQ 341

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDII 340
           IRTY     R + DHR N     ++  L G +D +I
Sbjct: 342 IRTYTLQPYRLVKDHRSNSETGNVDAFLDGDLDAMI 377


>gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
 gi|226739131|sp|B7IE81|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
          Length = 369

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 176/340 (51%), Gaps = 8/340 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            + +    E+E +M +S       K  E       I   I      + + +DL   I   
Sbjct: 27  ENKRKELEELEKQMGDSDFWSDQRKAREISQKAQRIRKIIDDMKDIEAKFEDLDAAIELS 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           + D    +  +  V  IEK+++  E      L+     D  +  L I  G GG+E+  + 
Sbjct: 87  DEDQSFVETIKEMVEEIEKKVKTFEL----ELILNGKFDASNAYLTIHPGAGGTESQDWA 142

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + + V+++     ++ G K  +  I G   +  +K+E GVHR+ R+ 
Sbjct: 143 SMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKSAMIYIKGDYAYGYLKYERGVHRLVRIS 202

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ R HTS A+V V+P    +ID++I  ED+RIDT RASG+GGQ+VN T+SAVRITH
Sbjct: 203 PFDANKRRHTSFASVNVIPEIDDDIDIEINPEDLRIDTYRASGAGGQYVNKTESAVRITH 262

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +E+SQ QN+  A+KVL+ARLY +E ++   +     + ++       +IR
Sbjct: 263 IPTGIVVTCQTERSQLQNKETALKVLKARLYQLELEKRQKQLEEI-QGELKDISWGNQIR 321

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y F     + DHR N+    ++ V+ G ID  I   L  
Sbjct: 322 SYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIFIESELIH 361


>gi|291243180|ref|XP_002741481.1| PREDICTED: CG5705-like [Saccoglossus kowalevskii]
          Length = 411

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 142/352 (40%), Positives = 213/352 (60%), Gaps = 6/352 (1%)

Query: 10  CDLKNRFAEIEL-RMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +KN + +I+   +SES S+       L      + PI+  +  +++K  E ++++ ++
Sbjct: 48  KKIKNEYDDIQKDLLSESASITGSKLKNLHRRKLELLPIVDLLKKWEEKNVELEEINILL 107

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D N +  I    + ++  +       +   + L+   + DD    ++EI AG GG EA 
Sbjct: 108 QDSNDNEMISLAKEEKLEMMAAIRELEDEIFSLLVPKDEDDDTSDVLVEISAGVGGQEAM 167

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF  ++F MY+RYA  ++W+ +VL    +D GG +    ++SG GV+S MK+E GVHRVQ
Sbjct: 168 LFAAEMFEMYQRYAHFQRWQFDVLDVGKSDIGGIRHATVSVSGPGVYSYMKYEGGVHRVQ 227

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TE  GRVHTS  TVAVLP+  EID+ I   D++I+T RASG+GGQHVNTTDSAVRI
Sbjct: 228 RVPKTEKQGRVHTSTMTVAVLPQPREIDLQIKPSDLKIETKRASGAGGQHVNTTDSAVRI 287

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTGI      E+SQ +N+  AMKVL  RLY+ + +   + +  +RKLQ+GS  RSE+
Sbjct: 288 VHLPTGIAAECQQERSQIKNKAMAMKVLETRLYNKQLEEQQHIQRQSRKLQVGSSGRSEK 347

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSA 355
           IRTYNF+Q RITDHRI   L+ ++  L G   ++D+I  L   +  + + + 
Sbjct: 348 IRTYNFNQDRITDHRIGQHLHNIDGFLSGGDDLNDLIESLQEYYSVEAVKTL 399


>gi|254467077|ref|ZP_05080488.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
 gi|206687985|gb|EDZ48467.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
          Length = 375

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 119/335 (35%), Positives = 171/335 (51%), Gaps = 5/335 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  I+ Y   KQ+  D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDDPEAAQKLMRERQALVDSINTYKGIKQDLSDNIELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +   E      + R  E E+  L       D     LEI AG GG+E+  +   L R
Sbjct: 91  AEVVKDAEESLKALKERAAEKELEAL--LDGEADANDTFLEINAGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S S  D+ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS ++V V P     I++++   DIR+DT R+SG+GGQHVNTTDSAVRITHIPTGI
Sbjct: 209 AKRHTSFSSVWVYPVVDDNIEIEVNPSDIRVDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY  E  R   E +A  + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQQELDRRHAEINAAHEAK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + + D R        + VL G +D  +   L  +
Sbjct: 328 YQMVKDLRTQYETSDTKGVLDGDLDGFMAATLAMN 362


>gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
           DSM 5476]
 gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
           DSM 5476]
          Length = 375

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 14/352 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A++E   ++    D      +     + + + I+ +++ +   +D  T++ 
Sbjct: 31  DVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRLKNTIAEFEKIESLYEDTQTLVE 90

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D    D  +  + +I+ ++           L     D  + IL   AG GG+EA
Sbjct: 91  FAFEEDDESCSDEVKANLKSIQDQVD----AQRLATLLSGEYDANNAILTFHAGAGGTEA 146

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +V  LFRMY  +A    ++ + L   + ++ G K I   I G   +  +K E+GVHR+
Sbjct: 147 MDWVEMLFRMYSHWAERHGFQTKTLDFVEGEEAGIKSISILIVGTNAYGFLKSETGVHRL 206

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            RV   ++SGR HTS A++ V+PE    I+V+I  ED+R+DT R+SG+GGQHVN T+SA+
Sbjct: 207 VRVSPFDSSGRRHTSFASLEVIPEVDDSIEVEIRPEDLRVDTYRSSGAGGQHVNKTESAI 266

Query: 245 RITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH+PTGI+    +E+SQ QNR  AMK+L+++L +++ +   ++ S  +  Q  I  G 
Sbjct: 267 RITHLPTGIVTACQNERSQMQNRAVAMKMLKSKLIEIKEREHLDKISDIKGEQKEIAWG- 325

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
              +IR+Y F     + DHR       +  V+ G +D  IN  L A   K +
Sbjct: 326 --SQIRSYVFMPYTLVKDHRTGFENGNISAVMDGDLDGFINAYLVAKSQKKL 375


>gi|168333703|ref|ZP_02691956.1| peptide chain release factor 2 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 349

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 105/354 (29%), Positives = 166/354 (46%), Gaps = 16/354 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M +     +  ++ +  E+E   +             + +E      IISK        +
Sbjct: 1   MKWGDLFDVTHVQEQITELETISATPDFWQNSKYAQSVLQEXKDYKEIISKYKKLCNMYE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +   L  +  + +      +        IE       + +    L     D    I+ + 
Sbjct: 61  DVLVLIDMGIEEHDADMCAEAISDANSFIEFY-----DNLRTSTLLDGEYDKNDAIISLH 115

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG+EA  +   L RMY R+A    +K ++L   D ++ G K     ISG+  +  +K
Sbjct: 116 AGAGGTEACDWNNMLLRMYTRWAEKHGFKSKLLDILDGEEAGVKSATLEISGQNAYGYLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
            E G+HR+ R+   ++ GR HTS A++ V+P+  +  ++ I  ED++IDT R+SG+GGQH
Sbjct: 176 SEKGIHRLVRISPFDSGGRRHTSFASLDVMPKIDDTAEITINPEDLQIDTYRSSGAGGQH 235

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR-- 293
           VNTTDSAVRITH P+GI+V   +E+SQ QNR   MK+L ++L   + +    +    R  
Sbjct: 236 VNTTDSAVRITHKPSGIVVQCQNERSQIQNRETCMKMLASKLLYKQHQEQLLKIDEIRGE 295

Query: 294 KLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           K  I  G    +IR+Y F     + DHR N        V+ G ID  +N  L  
Sbjct: 296 KKDIAWG---SQIRSYVFHPYNMVKDHRTNQETGNTGAVMDGDIDAFVNAYLAW 346


>gi|260433401|ref|ZP_05787372.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417229|gb|EEX10488.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 375

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 114/335 (34%), Positives = 171/335 (51%), Gaps = 5/335 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  I  Y+  K + +D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDNPENAQKLMRERQVLVDAIETYESIKTDLKDNVELIELGEMEGD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +   E    +   +  E E+  L       D     LEI AG GG+E+  +   L R
Sbjct: 91  EEVVKDAEEALKKLRDKAAEKELEAL--LDGEADANDTFLEINAGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S +  ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSETPGEEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS ++V V P     I++++   DIR+DT R+SG+GGQHVNTTDSAVRITHIPTGI
Sbjct: 209 AKRHTSFSSVWVYPVVDDNIEIEVNPADIRVDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R   E +A  + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAAHEAK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + + D R        + VL G +   +   L  +
Sbjct: 328 YQMVKDLRTGYETSDTKGVLDGDLGGFMAATLAMN 362


>gi|119476451|ref|ZP_01616802.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2143]
 gi|119450315|gb|EAW31550.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2143]
          Length = 364

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 169/341 (49%), Gaps = 15/341 (4%)

Query: 13  KNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           K +  E+EL + E    D      +L ++ AA+  ++S I        +  +L  +  + 
Sbjct: 30  KEQLTEVELELGEPAVWDDPGRAQELGKQRAALDIVVSTIDKLTVGVSDVAELLEMAVEE 89

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           +    + ++     L  +         + +  +     D  +  LEI++G+GG+EA  + 
Sbjct: 90  DDADTVMEIENELQLLNQHL-----ATLEFRRMFSGEMDANNAFLEIQSGSGGTEAQDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             + RMY R+   + +  E++ +SD D  G K      SG   F  ++ E+GVHR+ R  
Sbjct: 145 EMICRMYLRWGESKGFSTELMEASDGDVAGIKSATIRFSGEYAFGWLRTETGVHRLVRKS 204

Query: 190 ATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++  R HTS A+V V PE  E         D+R DT RASG+GGQHVN TDSAVRITH
Sbjct: 205 PFDSGSRRHTSFASVFVSPEIDEDIDIEINPSDLRTDTYRASGAGGQHVNKTDSAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSER 305
            P+GI+V   S++SQHQNR  AMK L+A+LY++E  +     +   + K  IG G    +
Sbjct: 265 EPSGIVVQCQSQRSQHQNRDFAMKQLKAKLYEMEMLKRNEAAQAQEDNKADIGWG---SQ 321

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y     RI D R ++       VL G +D  I   L  
Sbjct: 322 IRSYVLDDQRIKDLRTHVQTSNCNNVLDGDLDLFIEASLKM 362


>gi|75759027|ref|ZP_00739135.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228903659|ref|ZP_04067779.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
 gi|228911012|ref|ZP_04074820.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
 gi|228968278|ref|ZP_04129276.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|74493493|gb|EAO56601.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228791451|gb|EEM39055.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228848667|gb|EEM93513.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
 gi|228855927|gb|EEN00467.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
          Length = 326

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++      D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMSAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    +    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
           4047]
 gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
           4047]
          Length = 338

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 188/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E +M+E    +  +   +    ++ +      +   ++   +    +   + 
Sbjct: 1   MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETELYLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  ++ + + +   E      LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSVKEELEASLIKLSQMLASYE----MTLLLSEPYDHSNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY R+   + +KVE L     D+ G K +  +I G   +  +K E GVHR+ R+   
Sbjct: 117 LFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR N  + +++ V+ G I+  I+  L     +
Sbjct: 294 SYVFTPYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWRMGE 337


>gi|300022372|ref|YP_003754983.1| hypothetical protein Hden_0845 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524193|gb|ADJ22662.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 377

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 99/350 (28%), Positives = 169/350 (48%), Gaps = 14/350 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           ++R A +  +  +           +       +   +  + + +++  D  T+I    ++
Sbjct: 29  EDRLASLNAKAEDPNLWSDAKNAQKVMRQRQTLERSVEDFKRLQRDYDDALTLIELGEAE 88

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
           S+   +++ E      ++      +    +     D  S  +E+ AG GG+E+  +   L
Sbjct: 89  SDEASVSEGEAALKRVDLEAHRRSVE--AMLSGEADGMSTYVEVHAGAGGTESQDWASML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+   R +KV+++  S  ++ G K     I G   F  +K E+GVHR+ R+   +
Sbjct: 147 ARMYARWGERRGYKVKLIDESPGEEAGIKSATFEIDGDNAFGWLKTEAGVHRLVRISPFD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ R HTS A+V V P     I+VDI   D+ I   R+SG+GGQHVN T+SAVR+ H P+
Sbjct: 207 SNARRHTSFASVTVYPVIDDTIEVDINPADVDISFARSSGAGGQHVNRTESAVRLVHKPS 266

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRT 308
           GI++    ++SQHQN+  A + L+ARLY++E K+   + +A +  K  IG G    +IR+
Sbjct: 267 GIVIFAQEQRSQHQNKDIAFRRLKARLYEMELKKREAKANAEQAAKTDIGWG---HQIRS 323

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           Y     + + D R          VL G ID  I   L+      +    E
Sbjct: 324 YVLQPYQLVKDLRTGAQSTNPSEVLDGDIDPFIEAALSQ----RLKGGGE 369


>gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis
           MB4]
          Length = 347

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 180/347 (51%), Gaps = 10/347 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  +K    +IE +MS+        K  E       +   +  Y+      +DL+T+I 
Sbjct: 5   DVEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTLIE 64

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D  I +  + E   ++KE+  L        L     D  + IL I AG+GG+EA
Sbjct: 65  LGLEEGDESIAEEVEREYKELKKEVENL----KIRTLLSGPYDKNNAILSIHAGSGGTEA 120

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  + ++VE+L   + ++ G K     I G   +  +K E+GVHR+
Sbjct: 121 QDWAEMLLRMYTRWANDKGFEVEILDYLEGEEAGIKSATLLIKGPFAYGYLKGEAGVHRL 180

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+GR HTS A V V+PE   +I+++I  ED++IDT RASG+GGQHVN T+SAV
Sbjct: 181 VRISPFDAAGRRHTSFALVEVIPELEDDIEIEIRPEDLKIDTFRASGAGGQHVNKTESAV 240

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V   +E+SQ QNR  AMK+L+A+L D+  K    +     K +       
Sbjct: 241 RITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKERKEKIEDL-KGEHREAAWG 299

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +IR+Y F     + DHR N     +  V+ G ID  IN  L    A
Sbjct: 300 NQIRSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFINAYLKQKSA 346


>gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 337

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 12/331 (3%)

Query: 23  MSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    D      K+  E   +   + K +    + ++   L  +  + N +S I ++ 
Sbjct: 1   MEEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYEENDESLIPEIE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
            +     ++        +    L     DD S I+++ AG GG+E+  +   L+RMY R+
Sbjct: 61  AMLEEFTKEIDA-----LKIATLLTGEYDDASAIMKLNAGAGGTESCDWCSMLYRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           AA   + V+VL   D D+ G K +   I+G   +  ++ E GVHR+ R+    A+G+  T
Sbjct: 116 AAKEGYTVDVLDILDGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  ++P+  E  DVDI  +D+RIDT R+SG+GGQH+N T SA+RITHIPTG++V   
Sbjct: 176 SFVSCDIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QN+ +AM++L+A+L+ ++++    + S  R   +       +IR+Y       +
Sbjct: 236 NERSQFQNKDKAMQMLKAKLFMLKQQANVEKLSDIR-GDVKDIGWGNQIRSYVMQPYTMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            DHR       +  V+ G ID  I   LT  
Sbjct: 295 KDHRTGAESGNVSAVMDGDIDKFIIAYLTWQ 325


>gi|7573420|emb|CAB87736.1| translation releasing factor RF-1-like protein [Arabidopsis
           thaliana]
          Length = 419

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 208/354 (58%), Gaps = 8/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  ++  + E+ +++++   V     Y KL +  + +  +++    +   +++  +   
Sbjct: 60  KMESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKV 119

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D ++ ++   E+ ++ KEI ELE ++  LLLP D  D ++ +LE+RAGTGG E
Sbjct: 120 LAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDE 179

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA++ GDL                +   +     GYK  V  I G  V+S++K+ESGVHR
Sbjct: 180 AAIWTGDLVGADVSEVQR---AQLLEVFNGFMLRGYKTCVMEIKGNRVYSKLKYESGVHR 236

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVP TE  GRVHTS ATVA++PEA E++V I  +DI + + R+ G+GGQ+VN  ++A+
Sbjct: 237 VQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAI 296

Query: 245 RITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
            + H P+GI +  + E++Q +N+ RA ++LRA+LY+++ +    +    RK Q+G+G RS
Sbjct: 297 DLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARS 356

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           E+IRTYN+   R+TDHR+ +  + L   L G ++D +       Q +++   SE
Sbjct: 357 EKIRTYNYKDSRVTDHRLKMN-FALTTFLDGALEDAVQACAALEQKELMEELSE 409


>gi|215764957|dbj|BAG86654.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 314

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 159/313 (50%), Positives = 224/313 (71%), Gaps = 2/313 (0%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I     K++E + L +++ +   + + R++A  E+L   +E ++L++++   LLPKD
Sbjct: 1   MDMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKD 60

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D++ CILE+RAGTGG EA+LF  D+F+MYE+Y+    WK + +   ++   GYKE   
Sbjct: 61  EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASG 120

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRID 225
           TISG G + ++KFESG+HRVQRVP TE SGRVHTSA +VA+LP+A E+DV +  ED+RID
Sbjct: 121 TISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRID 180

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+ GSGGQ VNTTDSAVRITH+PTG +V    E+SQHQN+ +A+KVLRARLY++ER R
Sbjct: 181 TYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHR 240

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPL 343
           +  +RS  R  QIGSGDRSERIRTYNF QGR+TDHR+ +T + +E V++G  +D  I+ L
Sbjct: 241 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIEDVMEGESLDIFIDAL 300

Query: 344 LTAHQAKMIGSAS 356
           L  ++   I S +
Sbjct: 301 LLRYEMDAIASFA 313


>gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
           SK141]
 gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
           SK141]
          Length = 367

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 158/345 (45%), Gaps = 10/345 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L  R  E+E +  +    D      +  + +S   +K+   +  +   +D+  +    
Sbjct: 26  EALAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLESLRGRLEDMPVMYELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             + +               +      +    +     D +  ++ IR+G GG +AA + 
Sbjct: 86  EEEGDT-----SLADDELDSLESAIESLEVTTMLSGEYDPREAVINIRSGAGGVDAADWA 140

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     KV+V   S  ++ G K     + G  ++ ++  E G HR+ R+ 
Sbjct: 141 EMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRIS 200

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 201 PFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQSVNTTDSAVRLTH 260

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++R
Sbjct: 261 IPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAELDAL--GAGGNASWGNQMR 318

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +Y     + + D R N  +     VL G ID  +   +     + 
Sbjct: 319 SYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWRMQQQ 363


>gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41]
 gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus
           C3-41]
          Length = 328

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 16/332 (4%)

Query: 22  RMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M E    D              +  I+++    ++  +       ++       E  + 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEETHENLDMTLELLR-----EEPDEE 55

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q E+     E ++   +    LL     D  + ILE+  G GG+E+  +   L RMY R
Sbjct: 56  LQEELGKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A  R +KVE +     D+ G K +  +I G   F  ++ E GVHR+ R+   ++SGR H
Sbjct: 116 WAEKRGFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS  +  V+PE  E  ++DI  ED++IDT RA+G+GGQH+NTTDSAVRITHIPTG +V  
Sbjct: 176 TSFVSCDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQC 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR +AM +L+ +LY +E ++   +    R  Q  IG G    +IR+Y F   
Sbjct: 236 QAERSQIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             + DHR N     +  V+ G +D  IN  L 
Sbjct: 293 SMVKDHRTNEETGNVGAVMDGDLDPFINAYLR 324


>gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
 gi|158433669|gb|EDP11958.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
          Length = 346

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 12/348 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQ 60
           +S   + + K++  E+  R  E              ++   +  ++      D      +
Sbjct: 1   MSRFDLAEKKHKIEELTARTMEESFWSDPQHAQTLIQQLNGLKDVVESYEQLDHALAGME 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +  T++ D + D+EI +L ++E   +E+   + E      +L     D  + ILE+  G 
Sbjct: 61  ETLTLLKD-DFDTEIFELLEMEYHEMEERFEQFEL----KMLLSHEYDHSNAILELHPGA 115

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+E+  +   L+RMY R+A  + +KV VL     D+ G K I   + G   +  +K E 
Sbjct: 116 GGTESCDWADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEK 175

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHR+ R+   ++ GR HTS A++ V+P+  +  +++I  ED+ ++T RASG+GGQH+N 
Sbjct: 176 GVHRLVRISPFDSGGRRHTSFASLDVMPQFNDEIEIEIRPEDLIVETKRASGAGGQHINK 235

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSA+R+ H PTG++    + +SQH+NR  A+++L++R+Y    +    + +  +  Q  
Sbjct: 236 TDSAIRMVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKA 295

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           + +   +IR+Y F     + DHR        + V+ G +D  I   L 
Sbjct: 296 N-EWGSQIRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYLK 342


>gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281413|gb|EDT46848.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 336

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 185/341 (54%), Gaps = 12/341 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E +M+E    +  I   +    ++ +      +++ ++   +    +   + 
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  I+   +       +++ ++       LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSIQAELE----ETLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY RY   + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LFRMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS ++V V+PE    ++V+I  +DI++DT R+ G+GGQ+VN   + +R+THIP
Sbjct: 177 DSAKRRHTSFSSVEVMPELDDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F+    + DHR    + +++ V+ G ID  I+  L   
Sbjct: 294 SYVFTPYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334


>gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
 gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
          Length = 387

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 12/353 (3%)

Query: 5   SHKQI---CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           + ++I    +L +R  E+E + ++    D      +  + +S + +++    + +Q   D
Sbjct: 38  TIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTELRQRLDD 97

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +      + +   L   E+  +   +  LE       +     D +  ++ IR+G G
Sbjct: 98  LPIMYELAEEEGDDTSLVDEELADLRTGVEALEV----KTMLSGEYDAREAVINIRSGAG 153

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G +AA +   L RMY R+A     KV+V   S  ++ G K     + G  ++ ++  E G
Sbjct: 154 GVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQLSVEQG 213

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HR+ R+   +  GR  TS A V VLP   +   +DIP  ++R+D  R+SG GGQ VNTT
Sbjct: 214 AHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQSVNTT 273

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+THIPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+
Sbjct: 274 DSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDAL--GAGGN 331

Query: 300 GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
                ++R+Y     + + D R N  +     VL G ID ++   +    A+ 
Sbjct: 332 ASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWRMAQQ 384


>gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L]
 gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al
           Hakam]
 gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676]
 gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185]
 gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
 gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
 gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
 gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
 gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
 gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
 gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550]
 gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
 gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
 gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
 gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293]
 gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
 gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus anthracis CI]
 gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L]
 gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus
           thuringiensis str. Al Hakam]
 gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293]
 gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
 gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
 gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
 gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550]
 gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
 gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
 gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
 gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
 gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
 gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
 gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185]
 gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676]
 gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
 gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis
           str. CI]
          Length = 326

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 110/333 (33%), Positives = 167/333 (50%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++ K    D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|238759279|ref|ZP_04620445.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236]
 gi|238702440|gb|EEP94991.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236]
          Length = 310

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 107/316 (33%), Positives = 170/316 (53%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E +A+  I+S I   DQ  ++   L  +  + + +    +       A    +    
Sbjct: 1   MGKERSALEEIVSTIDQLDQGMEDVSGLLELAIEADDEETFNEAV-----AELDTLDGKL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +     D  +C L+++AG+GG+EA  +   L RMY R+A  R +K E++  SD
Sbjct: 56  GQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     I G   F  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +I
Sbjct: 116 GDVAGLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D++I   D+RID  RASG+GGQHVN T+SAVRITH+PT I+    +++SQH+N+ +AMK 
Sbjct: 176 DIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+LY+ E ++   ++    + K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLYEFEMQKKNADKQVLEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGDLDKFIEASLKA 308


>gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1]
 gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1]
          Length = 327

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 172/333 (51%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    +   +          +  ++++     + ++  +    ++ + N      +L 
Sbjct: 1   MLQPDFWNDQQQAQGVINEANGLKELVNEYKDMQEMQENLEVTLELVKEENDAELQEELV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      ++            LL  +  D  + ILE+  G GG+E+  +   L RMY+R+
Sbjct: 61  EETKDLNKRLNE-----YELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKKGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  E  ++DI  ED++IDT RASG+GGQH+NTTDSAVRITH PTG++V   
Sbjct: 176 SFVSCEVMPEFNEEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR +AMK+L+A+LY    +    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREQAMKMLKAKLYQKRIEEQEQELAEIRGEQKDIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G I+  IN  L + 
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDINGFINAYLRSR 325


>gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ]
          Length = 358

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 108/359 (30%), Positives = 178/359 (49%), Gaps = 16/359 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           H ++     R +EI    +     D      K+ +E + +S ++   +   +   E + L
Sbjct: 7   HFEVERKSARLSEISDMEAMEGFWDDSDNAAKVQKEKSVLSDVVETYTTLKELFDEFEVL 66

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
                    +    +        +++            +L     D  + I+ I AG GG
Sbjct: 67  VEFANGEEDEDSALEAIDCYDKFLKQFNA-----AELKVLLSGEVDPNNAIVSINAGAGG 121

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +E+  +   LFRM  R+A  + +KV+VL   D D  G K    TISG   +  +K E GV
Sbjct: 122 TESCDWASMLFRMINRWAESKAFKVQVLDVQDGDSAGIKSATMTISGNYAYGYLKSEIGV 181

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +++ R HTS +++ V PE  +  +++I  +D++ID  R+ G+GGQ VNTTD
Sbjct: 182 HRLVRISPFDSNARRHTSFSSIFVSPEIDDNIEIEILDKDLKIDVYRSGGAGGQSVNTTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIG 298
           SAVRITHIPT  +V   +E+SQ QN+L+AMKVLR+RLY++E ++   + +     K +IG
Sbjct: 242 SAVRITHIPTNTVVTCQNERSQLQNKLQAMKVLRSRLYELEMEKRRAQEAETEASKQEIG 301

Query: 299 SGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            G    +IR+Y     + + D R +      E VL G +D  ++  L    +  I   +
Sbjct: 302 WGA---QIRSYVLHPYKLVKDTRTSFESGNAEKVLDGDLDGFMDAFLRWSVSSKIEEEN 357


>gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1]
 gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           SSI-1]
          Length = 337

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E  M+E    +  I   +    ++ +  K   +   ++   +   ++   + 
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  ++     + ++       LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDFLKEELEENLMQ----LDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS A+V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V+S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR
Sbjct: 237 TGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR N  L +++ V+ G I+  I+  L      
Sbjct: 294 SYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 337


>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 379

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 10/352 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + DLK++  E+E + S+    D      +  + +S + ++I      +Q   D+  +  
Sbjct: 24  DVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQAQIKKVTTLRQRVDDMPVMYE 83

Query: 68  DHNS-----DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      D++  D A+    +  + +R     +    +     D++  ++ IR+  GG
Sbjct: 84  LADDATEAGDTDAADEAREMADSERETLRHEIESLEVQTMLSGEYDEREAVVNIRSAAGG 143

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            +AA +   L RMY R+      K++V   S  ++ G K     + G  ++ ++  E G 
Sbjct: 144 VDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGIKSATFIVHGDYMYGQLSVEQGT 203

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +  GR  TS A V VLP       +DI   D+R+D  R+SG GGQ VNTTD
Sbjct: 204 HRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIDENDVRVDVYRSSGPGGQSVNTTD 263

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V   +EKSQ QN+  AM+VL A+L D +R+    E +A +    GS 
Sbjct: 264 SAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLDRKREEEQAEMNALKGD--GSN 321

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
               ++R+Y     + + D R N  +     VL G +D  +   +    A+ 
Sbjct: 322 SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWRMAQQ 373


>gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
 gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
          Length = 327

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 110/333 (33%), Positives = 167/333 (50%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++ K    D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKSLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
           574]
          Length = 326

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 169/332 (50%), Gaps = 12/332 (3%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    D      ++T++ A +   +   +  +   Q+ + +  +  +        +L 
Sbjct: 1   MTQEGFWDNTEHSQQVTQKLALLKDKVEAFNSLESAYQDLEVMLELCNEEEDPLLDDELK 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  ++            ++     D    IL + AG GG+E+  +V  L RM+ RY
Sbjct: 61  SDLASLTKRVADM-----ELEVMLSGPYDRNDAILSLHAGAGGTESQDWVQMLLRMFTRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +KVEVL     D+ G K     +SG   +  +K E GVHR+ R+   +A+GR HT
Sbjct: 116 CENHNYKVEVLDLLPGDEAGVKSATIQVSGPNAYGYLKSEKGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V VLP   +  +V+I  ED++IDT R+ G+GGQHVN TDSAVRITH+PTGI+V   
Sbjct: 176 SFASVDVLPVVDDEVEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ  NR  AMK+L+A+L D+E ++   E +A R  Q        +IR+Y F     +
Sbjct: 236 NERSQTYNRAAAMKLLKAKLIDLELRKKEEELAALRGDQ-KDIAWGSQIRSYVFHPYSLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            DHR  + +  +  V+ G ID+ I   L   +
Sbjct: 295 KDHRTGVEVGNVYAVMDGAIDEFIAAYLKQKR 326


>gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
           18311]
 gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus
           CNRZ1066]
 gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9]
 gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
           18311]
 gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus
           CNRZ1066]
 gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus
           thermophilus LMD-9]
          Length = 337

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E RM+E    +  I   +    ++ +  K   ++  K+   +    +     
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEMLEE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  +  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSVQEELEETLEKLDKIMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY+RY   + +KVE L     D+ G K +     G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR    + +++ V+ G I+  I+  L     +
Sbjct: 294 SYVFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWRMEE 337


>gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
 gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
          Length = 336

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 186/341 (54%), Gaps = 12/341 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E +M+E    +  I   +    ++ +      +++ ++   +    +   + 
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D    D  Q E+    +++ ++       LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  D----DSIQSELEETLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY RY   + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LFRMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS ++V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFSSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F+    + DHR    + +++ V+ G ID  I+  L   
Sbjct: 294 SYVFTPYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334


>gi|45443320|ref|NP_994859.1| peptide chain release factor 2 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806377|ref|YP_650293.1| peptide chain release factor 2 [Yersinia pestis Antiqua]
 gi|108813248|ref|YP_649015.1| peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|145597933|ref|YP_001162009.1| peptide chain release factor 2 [Yersinia pestis Pestoides F]
 gi|170023172|ref|YP_001719677.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
 gi|186896595|ref|YP_001873707.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
 gi|270487483|ref|ZP_06204557.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
 gi|294502944|ref|YP_003567006.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
 gi|21960210|gb|AAM86823.1|AE013928_8 peptide chain release factor RF-2 [Yersinia pestis KIM 10]
 gi|45438189|gb|AAS63736.1| peptide chain release factor RF-2 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108776896|gb|ABG19415.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Nepal516]
 gi|108778290|gb|ABG12348.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Antiqua]
 gi|145209629|gb|ABP39036.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Pestoides F]
 gi|169749706|gb|ACA67224.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
 gi|186699621|gb|ACC90250.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
 gi|262360979|gb|ACY57700.1| peptide chain release factor RF-2 [Yersinia pestis D106004]
 gi|262364919|gb|ACY61476.1| peptide chain release factor RF-2 [Yersinia pestis D182038]
 gi|270335987|gb|EFA46764.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
 gi|294353403|gb|ADE63744.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
          Length = 310

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 105/316 (33%), Positives = 171/316 (54%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E + +  I++ I   +Q  ++   L  +  + + +    +      +A  + +    
Sbjct: 1   MGKERSTLEEIVTTIDQLEQGLEDVSGLLELAVEADDEETFNET-----IAELEVLDGKL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +     D  +C L+++AG+GG+EA  +   L RMY R+A  R +K E++  SD
Sbjct: 56  GQLEFRRMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     I G   F  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +I
Sbjct: 116 GDVAGLKSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D++I   D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK 
Sbjct: 176 DIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+LY+ E ++   ++    + K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLYEFEMQKKNADKQVLEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGDLDKFIEASLKA 308


>gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
 gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
          Length = 378

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 101/355 (28%), Positives = 169/355 (47%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK   A++E + +E    D      +  + +S   S++       Q  +D  T+I 
Sbjct: 25  DVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIEDTKTLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   +++ +            +++    L     D +S ++ IR+G GG +AA 
Sbjct: 85  LGQEEGDADSMSEAQEELGNIAHEL--DDMEVQTLLDGEYDARSAVVTIRSGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K +++ +S  ++ G K     +     + R+  E G HR+ R
Sbjct: 143 FAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  T  + V V+P   A   +DIP  DIR+DT +ASG GGQ VNTT SAVRI
Sbjct: 203 ISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRI 262

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRS 303
           TH+PTG++V+   E+SQ QNR  AM VL++RL  ++      E +A +K   G       
Sbjct: 263 THLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK----HAEEAAKKKELAGDIKASWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G ID  I   +     + + +  E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAAQKE 373


>gi|94502363|ref|ZP_01308828.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833646|ref|YP_001597842.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS]
 gi|94451077|gb|EAT14037.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206135|gb|ABS30445.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS]
          Length = 355

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 154/348 (44%), Positives = 223/348 (64%), Gaps = 8/348 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K+I  LK RF E+   + +   +     Y+KL++EY  I  II+  + Y +KK+  +++ 
Sbjct: 9   KKIEVLKKRFYELSFLIIKPEIIHDNKKYVKLSKEYKIIYKIINYYNSYKEKKKYLKEIE 68

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++I   +SD E+ + A  E      E+  L  +I YL   K  ++  + ++E+RAGTGG 
Sbjct: 69  SLIKL-DSDKELLEFAIFEKKKNLLELEFLIKKIEYL--LKKNNNTNNVLMELRAGTGGD 125

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA +FV ++FRMY  Y     WK E+L+       GYKEI+  I G+ V+  +KFESGVH
Sbjct: 126 EACIFVENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVH 185

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           RVQRVP+TE+ GR+HTSA TVA+LP E    +++I L D++ +T RASG+GGQHVN T+S
Sbjct: 186 RVQRVPSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTES 245

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A+R+THIPTGI+     E+SQH+N  +AMKVLRAR+Y  E K    + S  RK  I +GD
Sbjct: 246 AIRLTHIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNEKLSKERKSLISTGD 305

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           RS +IRTYN+ QGR+TDHRIN ++Y L+  + G I+++I  L    + 
Sbjct: 306 RSAKIRTYNYPQGRVTDHRINKSIYYLDKFMNGKINEMITALKILEKE 353


>gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
 gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium
           efficiens YS-314]
          Length = 389

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 12/353 (3%)

Query: 5   SHKQI---CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           + ++I    +L +R  E+E + ++    D      +  + +S + +++    + +Q   D
Sbjct: 40  TIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTELRQRLDD 99

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +      + +   L   E+  +   +  LE       +     D +  ++ IR+G G
Sbjct: 100 LPIMYELAEEEGDDTSLVDEELADLRTGVEALEV----KTMLSGEYDAREAVINIRSGAG 155

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G +AA +   L RMY R+A     KV+V   S  ++ G K     + G  ++ ++  E G
Sbjct: 156 GVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQLSVEQG 215

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTT 240
            HR+ R+   +  GR  TS A V VLP   +   +DIP  ++R+D  R+SG GGQ VNTT
Sbjct: 216 AHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQSVNTT 275

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVR+THIPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+
Sbjct: 276 DSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDAL--GAGGN 333

Query: 300 GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
                ++R+Y     + + D R N  +     VL G ID ++   +    A+ 
Sbjct: 334 ASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWRMAQQ 386


>gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
 gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
          Length = 329

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 181/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + +  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHEEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                    E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  V----EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|302391071|ref|YP_003826891.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium
           arabaticum DSM 5501]
 gi|302203148|gb|ADL11826.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium
           arabaticum DSM 5501]
          Length = 366

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 190/345 (55%), Gaps = 16/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L+ +  ++   MS+    D      ++++E +A+  ++      +++ +E + L  + 
Sbjct: 26  DKLEEKHDQLRAEMSKPGFWDDSSRAQQISKEASALKDMMESFDRLEERLEEIEVLIELG 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + DS   ++         + + E   E+   ++     D  S +L I  G GG ++ 
Sbjct: 86  QEEDDDSVTEEIKDK-----LQGLEEDIEELELKVVMDGEYDQNSALLSINPGAGGIDSQ 140

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +++E L     ++ G K +   I+G   +  +K E GVHR+ 
Sbjct: 141 DWAEMLLRMYNRWAEKKDYQIETLEFMAGEEAGIKSVTLQINGPYAYGYLKAEKGVHRMV 200

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           RV   ++SGR HTS A+V VLP    +ID+DI   D++I+T RASG+GGQHVNTTDSAVR
Sbjct: 201 RVSPFDSSGRRHTSFASVEVLPEIEDDIDIDIEKNDLKIETYRASGAGGQHVNTTDSAVR 260

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH PTGI+V   S +SQH+NR +AM++L+A+L+D  +++ A + S  R  K  I  G  
Sbjct: 261 ITHQPTGIVVQCQSLRSQHKNRQKAMQILKAKLFDYMKEKQAEKLSEIRGEKKDISWG-- 318

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y F   + I DHR NL +  +E V+ G +D +I   L  
Sbjct: 319 -SQIRSYFFDPYQLIKDHRTNLEINNIEAVMDGELDPLIEAYLKE 362


>gi|238754561|ref|ZP_04615915.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
 gi|238707192|gb|EEP99555.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
          Length = 310

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 170/316 (53%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E +++  I++ I    Q  ++   L  +  + + +    +       A  + +    
Sbjct: 1   MGKERSSLEEIVTTIDELAQGLEDVSGLLELAIEADDEETFDEAV-----AELEILDGKL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +     D  +C L+++AG+GG+EA  +   L RMY R+A  + +K E++  SD
Sbjct: 56  GQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     I G   F  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +I
Sbjct: 116 GDVAGLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D++I   D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK 
Sbjct: 176 DIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+LY+ E ++   ++    + K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLYEFEMQKKNADKQMLEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGDLDKFIEASLKA 308


>gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
 gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
          Length = 326

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 110/333 (33%), Positives = 166/333 (49%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++ K    D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D    ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKGLIQEMNE-----YELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|227832559|ref|YP_002834266.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254790912|sp|C3PES4|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 368

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 11/349 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
             +  R  E+E +  +    D      +  + +S   +K+   +  +   +DL  +  + 
Sbjct: 26  EAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNSLRGRIEDLPVMSELA 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +   D   ++L + E+  +   I  LE             D++  ++ IR+G GG +AA 
Sbjct: 86  EEEGDEASQELVETELKELGAAIESLEVTTM----LSGEYDEREAVINIRSGAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV+V   S  ++ G K     + G  ++ ++  E G HR+ R
Sbjct: 142 WAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       +++P  ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 202 ISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDSEVRVDVYRSSGPGGQSVNTTDSAVRL 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     +
Sbjct: 262 THIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL--GAGGNASWGNQ 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +R+Y     + + D R N  +     VL G ID  +   +    A+   
Sbjct: 320 MRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGIRWRMAQQEA 368


>gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           KF147]
 gi|24638157|sp|Q9CGX1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp.
           lactis KF147]
 gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
           CV56]
          Length = 365

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 173/345 (50%), Gaps = 10/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E  M++    +      +     + + +K   Y       ++  T++ 
Sbjct: 25  DLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMNNMLEEAQTMLE 84

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                +D E++   +   +A+ ++I   E EI          D  + +LEI  G+GG+E+
Sbjct: 85  MLQEEADEEMQAELEEMTIALGQKIESYELEIM----LNQPYDHMNAVLEIHPGSGGTES 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+     +KVE+L   D D  G K +     GR  +  ++ E GVHR+
Sbjct: 141 QDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFVGRNAYGFLRGEKGVHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ R HTS  +V V+PE    I+VD+   D+++DT R+ G+GGQ+VN   + V
Sbjct: 201 VRISPFDSANRRHTSFTSVDVMPELDDSIEVDVRDADVKMDTFRSGGAGGQNVNKVSTGV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V ++ +++Q+ NR +AM +L+++LY +E  +   E    R  Q       
Sbjct: 261 RLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ-SEISWG 319

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y F   + + D R      ++  V+ G +D  IN  L  +
Sbjct: 320 SQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYLRWN 364


>gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
 gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
          Length = 327

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 172/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D      +  +  +        +    +E +++  ++     + +     + E
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVDMLQEEPDAVMQEEAE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 + +   N     +L     D  + I+E+  G GG+E+  +   L RMY R+A  
Sbjct: 61  TRINALDEKM--NTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++VE L     D+ G K +   I G   F  +K E GVHR+ R+   +++ R HTS  
Sbjct: 119 HGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKAEKGVHRLVRISPFDSAKRRHTSFC 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    ID++I  +D++IDT RASG+GGQH+N T+SAVRITH+PTG +V + +++
Sbjct: 179 SVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR +AM +L+A+LY +E ++   E +A R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N+    ++ V+ G +D  I+  L  H
Sbjct: 296 DHRTNVETGNVQAVMDGDLDLFIDGYLKMH 325


>gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
 gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
          Length = 337

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E RM+E    +  I   +    ++ +  K   ++  ++   +    +     
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  +  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSVQEELEETLEKLDKIMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY+RY   + +KVE L     D+ G K +     G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR    + +++ V+ G I+  I+  L     +
Sbjct: 294 SYVFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWRMEE 337


>gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579]
 gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus
           ATCC 14579]
          Length = 325

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 165/329 (50%), Gaps = 16/329 (4%)

Query: 27  PSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEV 83
              D              +  ++ K    D+  +  +  H ++ +   +    +L     
Sbjct: 4   GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 84  LAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALR 143
             I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+A  R
Sbjct: 64  GLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118

Query: 144 KWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAAT 203
            +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  +
Sbjct: 119 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178

Query: 204 VAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKS 261
             V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   SE+S
Sbjct: 179 CEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERS 238

Query: 262 QHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITD 318
           Q +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F     + D
Sbjct: 239 QIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSLVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           HR N  +  ++ V+ G ID  I+  L + 
Sbjct: 296 HRTNTEVGNVQAVMDGEIDPFIDAYLRSR 324


>gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
           35098]
 gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
           35098]
          Length = 333

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 101/334 (30%), Positives = 166/334 (49%), Gaps = 8/334 (2%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +       +   K ++  A +S     ++ Y + ++  +D   ++          +  
Sbjct: 2   EKKSQSPDFWNDSDKASQIMADLSLKKEDLNEYKKLEEGIRDNVDLLDLVELSDNKEEDT 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
              V    + + +L +++          D  +C + I AG GG EA  +   LFRMY+RY
Sbjct: 62  VNAVEESLEALYKLADKMKLKTQLSGEYDKNNCYISINAGAGGLEATDWADMLFRMYKRY 121

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +K E+   ++ + GG K     + G   +  +K E GVHR+ R+   ++  R HT
Sbjct: 122 FDNVGYKYELKDLNNEEAGGIKSATLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHT 181

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V PE  +  ++DI   D+RIDT RASG+GGQHVN TDSAVRITHIPTG++  + 
Sbjct: 182 SFASVDVFPELDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQ 241

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG- 314
           +E+SQ QN+  AM +L ++L  ++ +    +    +    QI  G    +IR+Y F    
Sbjct: 242 AERSQIQNKQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWG---SQIRSYVFQPYT 298

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            + DHR N  +  +E V+ G +   I+  L +  
Sbjct: 299 MVKDHRTNYEMGNVEAVMDGDLQGFIDAYLASKN 332


>gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|122940216|sp|Q02ZM8|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 365

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 92/343 (26%), Positives = 171/343 (49%), Gaps = 6/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E  M++    +      +     + + +K   Y       ++  T++ 
Sbjct: 25  DLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMNNMLEEAQTMLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +++  +  Q+E+  +   + +        ++     D  + +LEI  G+GG+E+  
Sbjct: 85  MLQEEAD--EDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHPGSGGTESQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+     +KVE+L   D D  G K +     GR  +  ++ E GVHR+ R
Sbjct: 143 WGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRGEKGVHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +V V+PE    I+V++   D+++DT R+ G+GGQ+VN   + VR+
Sbjct: 203 ISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNVNKVSTGVRL 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V ++ +++Q+ NR +AM +L+++LY +E  +   E    R  Q        +
Sbjct: 263 THVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ-SEISWGSQ 321

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y F   + + D R      ++  V+ G ID  IN  L  +
Sbjct: 322 IRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRWN 364


>gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis
           M23864:W1]
 gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis
           M23864:W1]
          Length = 386

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 107/353 (30%), Positives = 175/353 (49%), Gaps = 17/353 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHT 64
            + + +    E E  M++    D   K  +      A+  I++       + ++      
Sbjct: 40  DLENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYHDLANEVEDMSATRE 99

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    +L +  +   EK  +         LL     D  + ILE+  G GG+E
Sbjct: 100 LLQEEYDEDMKAELEEEVIQFKEKMDQ-----YELQLLLDGPHDANNAILELHPGAGGTE 154

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY+RY   + +KVE +     D+ G K +   I G   +  +K E GVHR
Sbjct: 155 SQDWASMLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHR 214

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           + R+   ++SGR HTS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+S
Sbjct: 215 LVRISPFDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAGGQHINKTES 274

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGS 299
           A+RITH PTGI+V   +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG 
Sbjct: 275 AIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGW 334

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           G    +IR+Y F     + DHR N    K++ V+ G I+  I   L       
Sbjct: 335 G---SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYLRKEMDNQ 384


>gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
 gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
          Length = 372

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 172/346 (49%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +    E++ R++     D      +     + I   +  +D   ++  D+  +I 
Sbjct: 24  DLDSKREELQELDARIAAPGFWDDPSGSQDILKKRTVIEKLLQSWDSLNRQADDVRVMIE 83

Query: 68  --DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + +SD +           ++  + E E +         T D   C + + +G GG+E+
Sbjct: 84  LGEESSDEDTLTEVHQMNERLKSGVEEAEFQRM----LSGTHDRNGCFVSVNSGAGGTES 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RM  RY   + WK  +    D ++ G K    ++SG   +  +K E+GVHR+
Sbjct: 140 QDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSGEFAYGHLKAEAGVHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIP--LEDIRIDTMRASGSGGQHVNTTDSA 243
            R+   +++ R HTS A+V V PE  E D+DI     D+R+DT R+SGSGGQHVNTTDSA
Sbjct: 200 VRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTYRSSGSGGQHVNTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSG 300
           VRITH+PT I+V   SE+SQ  NR  AMKVLRA+LY+ E +    + S     K +IG G
Sbjct: 260 VRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERNAKASEIAGEKREIGWG 319

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y       + D R  +     + VL G +DD + P L 
Sbjct: 320 ---SQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFVIPFLM 362


>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
           17241]
 gi|167665826|gb|EDS09956.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
           17241]
          Length = 374

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 6/340 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ + AE+E + +     +   +  +     + +  K+   D+      D  T+IG  
Sbjct: 28  DALRRKLAELEEQTTAPGFWNDVERSQKNQLETARVRGKLEACDKLNALYDDTLTLIGLA 87

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D E  +    E LA  +             L     D  + I+   AG GG+EA  + 
Sbjct: 88  --DEENDESVYSEALADVERFESDLETQKLSTLLTGEYDANNAIMTFHAGAGGTEAQDWA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+A    +  ++L   D D+ G K     I+G   +  ++ E+GVHR+ RV 
Sbjct: 146 QMLYRMYTRWAERHGFTYKILDYLDGDEAGLKSASILITGDNAYGFLRSEAGVHRLVRVS 205

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +ASGR HTS A+V VLPE   +  V+I  EDI++D  R+SG+GGQH+N T SAVR+TH
Sbjct: 206 PFDASGRRHTSFASVEVLPELPDDHSVEINPEDIKMDVFRSSGAGGQHINKTSSAVRLTH 265

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +E+SQ QNR   MK+L A+L +++ +      +  +  Q+       +IR
Sbjct: 266 IPTGIVVSCQNERSQFQNREMCMKMLTAKLVEIKEREHLANINEIKGEQM-QIAWGSQIR 324

Query: 308 TYNFSQGRI-TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y F    +  DHR       +  V+ G +D  IN  L A
Sbjct: 325 SYVFMPYTLAKDHRTGFESGNINAVMDGDLDGFINAYLKA 364


>gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
           27029]
 gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5]
 gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
           27029]
 gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5]
          Length = 373

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 100/350 (28%), Positives = 164/350 (46%), Gaps = 7/350 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ + A +E   S     D   K  +  + +S +  +I+     +    D   ++ 
Sbjct: 25  DLDKLREQKARLEQEASAPDLWDDQAKAQQVTSQLSYVNGEITKLGDLRSRLDDAGVLLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++ +   L ++E           E  +    L     D +  ++ IRAG GG +AA 
Sbjct: 85  LAQAEDDPGALTEVESEITGLTKAIQE--MEVRTLLSGEYDSREALVAIRAGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +  EV  +S  ++ G K    T+     +  +  ESG HR+ R
Sbjct: 143 FAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       +DIP  ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQSVNTTDSAVRL 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN+  AM+VL+ARL + +R+    + +  +     +    ++
Sbjct: 263 THIPTGIVVTCQNEKSQLQNKASAMRVLQARLLERKRQEEEEKLAGLKTG--STSSWGDQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +R+Y     + + D R          V  G +D  I   +   + + + +
Sbjct: 321 MRSYVLHPYQMVKDLRTEQETGNPSSVFDGDLDSFIEAGIRWRKQQQLSA 370


>gi|254458681|ref|ZP_05072105.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1]
 gi|207084447|gb|EDZ61735.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1]
          Length = 369

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 177/347 (51%), Gaps = 14/347 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L +R  EIE   ++    +      K+ +E   +   + K SI      +  +L+ + 
Sbjct: 27  DKLTSRLEEIEELENDQDFWNDADNAAKIQKEKTQLQRKLDKYSIAKDAITDALELYEMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N +  I         +   ++ +L   +   +L     D  + IL I  G GG+E+ 
Sbjct: 87  KEENDEDSIE-----LCFSDASDLEQLILNMEVEVLLSGETDSNNAILSIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY+R+A    + VEVL     D+ G K+    I G   +  +K E+G+HR+ 
Sbjct: 142 DWAEMLLRMYKRWAERHGFGVEVLDYQVGDEAGIKDASILIKGENAYGYLKVENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ + HTS ++V V PE  +     +  +DIRIDT RASG+GGQHVN T+SA+R
Sbjct: 202 RISPFDSNAKRHTSFSSVMVSPEIDDDINIVVEDKDIRIDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHI T ++V   +++SQH+N+  AMK+LR+RLY++E      E +   K +IG G    
Sbjct: 262 ITHIATNVIVQCQNDRSQHKNKATAMKMLRSRLYELELAAQKAEIAGIAKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +IR+Y      ++ D R N     +  +L G ID +I  +L A   +
Sbjct: 319 QIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDKMIEGVLIAQNKQ 365


>gi|260775420|ref|ZP_05884317.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608601|gb|EEX34766.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 320

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 101/323 (31%), Positives = 168/323 (52%), Gaps = 12/323 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E +A+  ++  I   +Q  ++   L  +  +        ++        
Sbjct: 3   NEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPE----- 57

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
             E+     ++ +  +     D   C +++++G+GG+EA  +   + RMY R+A  + +K
Sbjct: 58  LAELEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            EV+  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  +
Sbjct: 118 TEVIEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFI 177

Query: 207 LPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE  +         D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+
Sbjct: 178 YPEIDDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R +
Sbjct: 238 NKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTS 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLT 345
           +     + VL G +D  I   L 
Sbjct: 295 VENRNTQAVLDGDLDKFIEASLK 317


>gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073]
 gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella
           thermoacetica ATCC 39073]
          Length = 330

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 104/336 (30%), Positives = 169/336 (50%), Gaps = 14/336 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M      +   +       ++ +  K++ Y + + +  D+  +  +     D  + +   
Sbjct: 1   MLAPGFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLALAEDDHSLEEE-- 58

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +      +           L     D  + IL +  G GG+E+  +   L RMY R+ 
Sbjct: 59  --IARDLAAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWC 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             R ++VE+L   + ++ G K     + G   +  ++ E GVHR+ R+   +A+GR HTS
Sbjct: 117 EDRGYQVELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTS 176

Query: 201 AATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            A+V V+PE   + +V+I  +D++IDT R+ G+GGQHVN TDSAVRITH+PTGI+V   +
Sbjct: 177 FASVDVIPEVEADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQN 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-R 315
           E+SQH NRL AMK+L+ARL  ++R+    E +  R  Q  I  G    +IR+Y F     
Sbjct: 237 ERSQHANRLSAMKILQARLAALKRQEQEAELAQIRGEQREIAWG---SQIRSYVFHPYSL 293

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           + DHR  +    ++ V+ G ID  I   L   + K 
Sbjct: 294 VKDHRTGVETGNIQAVMDGQIDPFIQAYLHWQRRKQ 329


>gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
 gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
          Length = 368

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 12/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEE 59
                +I   + + AE+E +M E    D      KL +E A +   +        K ++ 
Sbjct: 19  MRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYKGLMAKYEDA 78

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + L+ + G    D+ + D  + E+  I + +  L       +L     D  + IL + AG
Sbjct: 79  ETLYEM-GIEEGDASMEDDIRAELDLITEGLETL----QLEVLLSGDYDANNAILTLHAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+EA  +   L RMY R+A    + VE       D+ G K     I G   +  +K E
Sbjct: 134 AGGTEAQDWTQMLLRMYGRWAERHGFAVETADLQPGDEAGVKSATLFIKGHNAYGFLKSE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVN 238
            GVHR+ R+   ++  R HTS +   V+PE  +       ++D+R+D  RASG+GGQH+N
Sbjct: 194 KGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQHIN 253

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T SAVR+TH PTGI+V   +E+SQ QN+ + MK+LRA+L+++E+++   E +    +Q 
Sbjct: 254 KTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGVQQ 313

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +   +IR+Y F     + D R N     ++ V+ G ID  I   L A
Sbjct: 314 K-IEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNA 362


>gi|269925864|ref|YP_003322487.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 372

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 178/344 (51%), Gaps = 6/344 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           H  + + +    ++E R + S       +  +    ++ +  ++ ++ + ++  +D   +
Sbjct: 22  HLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDLKDQLEVWSKIERRLEDAEVL 81

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     +    D  +    +  + +    N +   LL   + D +  I+ I A  GG +A
Sbjct: 82  LDLAYEEDSASDFHEAA--SQIRALENQLNHLELELLLSGSYDQEDAIIAIHAREGGIDA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R W+ E++SS + ++ GYK     I G+  +   K E+G HR+
Sbjct: 140 QDWASMLVRMYLRWAQRRGWQAELVSSIEGEEAGYKSATIEIKGKYAYGYAKAEAGQHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   + + R HTS A V VLP+  E     I  ED++IDT RAS +GGQHVN T SAV
Sbjct: 200 VRLSPFDQAHRRHTSFALVEVLPDVEETPEVQIREEDLKIDTYRASSAGGQHVNKTSSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V   +E+SQ QN+  A+K+LRARL ++E +R A E++  +   I +G   
Sbjct: 260 RITHIPTGIVVTCQNERSQFQNKETALKILRARLLELELRRQAEEQARLKGEHIATG-WG 318

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +IR+Y       + DHR    +  +E VL G ID  I   L+ 
Sbjct: 319 SQIRSYVLHPYTMVKDHRTGYEVSDVESVLDGEIDPFIEAYLSQ 362


>gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str.
           A2012]
          Length = 325

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 164/329 (49%), Gaps = 16/329 (4%)

Query: 27  PSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEV 83
              D              +  ++ K    D+  +  +  H ++ +   +    +L     
Sbjct: 4   GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 84  LAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALR 143
             I++            LL  D  D    ILE+  G GG+E+  +   L RMY R+A  R
Sbjct: 64  GLIQEMNE-----YELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118

Query: 144 KWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAAT 203
            +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  +
Sbjct: 119 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178

Query: 204 VAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKS 261
             V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   SE+S
Sbjct: 179 CEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERS 238

Query: 262 QHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITD 318
           Q +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F     + D
Sbjct: 239 QIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSLVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           HR N  +  ++ V+ G ID  I+  L + 
Sbjct: 296 HRTNTEVGNVQAVMDGEIDPFIDAYLRSR 324


>gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
           SR1/5]
          Length = 332

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 106/329 (32%), Positives = 175/329 (53%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D       +   +  +   I  Y   + + +D+ T+I     +++   + +I+
Sbjct: 1   MEAPDFWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYEENDPEIVPEIQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
            +  E +       +  L       D ++ I+++ AG GG+EA  + G L+RMY R+A  
Sbjct: 61  EMLDEFQASFDSIRVKTL--LSGEYDGENAIIKLNAGAGGTEACDWCGMLYRMYSRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +EVL   D D+ G K +   ++G   +  +K E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGFALEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+  +  DV+I  +DIRIDT R+SG+GGQH+N T SA+RITH PTGI+V   +E+
Sbjct: 179 SCDVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG-RIT 317
           SQH N+ +AM++L+A+LY ++++    + S  R     IG G+   +IR+Y       + 
Sbjct: 239 SQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGN---QIRSYVLQPYTMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           DHR N     ++ VL G ID  IN  L  
Sbjct: 296 DHRTNEETGNVDAVLDGGIDIFINAYLKW 324


>gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
 gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
          Length = 329

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 104/333 (31%), Positives = 185/333 (55%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  +RD  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVRDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             ++  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VEQLTELDKMMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|323126937|gb|ADX24234.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 327

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 104/333 (31%), Positives = 180/333 (54%), Gaps = 12/333 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + S    +   ++   +    +     D  ++D  +  
Sbjct: 1   MTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDLEAS 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  + + +   E      LL  +  D  + ILEI  G+GG+EA  +   LFRMY R+   
Sbjct: 61  LETLGQILASYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFV 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RA+K+L+A+LY +E+++ A E +A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           DHR N  + +++ V+ G I+  I+  L    + 
Sbjct: 294 DHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMSD 326


>gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 368

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 174/349 (49%), Gaps = 10/349 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                +I   + + AE+E +MSE    D      +    ++ +   +  Y     + +D 
Sbjct: 19  MRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKALAAKYEDA 78

Query: 63  HTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            T+       +D  +    + E+  I + +  L       +L     D  + IL + AG 
Sbjct: 79  ETLYEMGIEENDPSMERDIRAELDLIAEGLETL----QLEVLLSGEYDANNAILTLHAGA 134

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+EA  +   L RMY R+A    + VE       D+ G K     I G   +  +K E 
Sbjct: 135 GGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSASLFIKGHNAYGFLKSEK 194

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHR+ R+   ++  R HTS +   V+PE  + ++VDI ++D+R+D  RASG+GGQH+N 
Sbjct: 195 GVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQHINK 254

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH PTGI+V   +E+SQ QN+ + +K+LRA+L+++E+++   E +    +Q  
Sbjct: 255 TSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQK 314

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +   +IR+Y F     + D R N     ++ V+ G ID  I   L A
Sbjct: 315 -IEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNA 362


>gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
 gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
          Length = 368

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 175/349 (50%), Gaps = 10/349 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                +I   + + AE+E +MSE    D      +    ++ +   +  Y     + +D 
Sbjct: 19  MRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKALAAKYEDA 78

Query: 63  HTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            T+       +D  +    + E+ AI + +  L       +L     D  + IL + AG 
Sbjct: 79  ETLYEMGIEENDPTMEGDIRAELDAIAEGLETL----QLEVLLSGEYDANNAILTLHAGA 134

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+EA  +   L RMY R+A    + VE       D+ G K     I G   +  +K E 
Sbjct: 135 GGTEAQDWTQMLLRMYGRWAERHGFSVETADLQPGDEAGVKSASLFIKGHNAYGFLKSEK 194

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHR+ R+   ++  R HTS +   V+PE  + ++VDI ++D+R+D  RASG+GGQH+N 
Sbjct: 195 GVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQHINK 254

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH PTGI+V   +E+SQ QN+ + +K+LRA+L+++E+++   E +    +Q  
Sbjct: 255 TSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQK 314

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +   +IR+Y F     + D R N     ++ V+ G ID  I   L A
Sbjct: 315 -IEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNA 362


>gi|15806000|ref|NP_294700.1| peptide chain release factor 1 [Deinococcus radiodurans R1]
 gi|7388053|sp|P56905|RF1_DEIRA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|6458704|gb|AAF10553.1|AE001950_5 peptide chain release factor 1 [Deinococcus radiodurans R1]
          Length = 375

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 145/365 (39%), Positives = 227/365 (62%), Gaps = 10/365 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
             +  ++ +L + F  +E R+ +  ++     Y +LT  +  + P+++ +   +Q + + 
Sbjct: 1   MANMSRLNELVSEFGLVERRLGDPQALADGREYARLTRRHRELLPLVTLVREREQAEADL 60

Query: 60  QDLHTVIGDHNS-DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
                ++ D +  D ++++LAQ+EV  ++  + E+E E+  LLLP D DD K  ILE+RA
Sbjct: 61  SGARELLQDPDMRDPDMKELAQLEVGGLQARLAEIEAELEVLLLPTDPDDGKDVILELRA 120

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG+EA LFV DL RMYERYAA    K+ VL ++++D GG  ++VA ++G   F  +K+
Sbjct: 121 GAGGAEAGLFVMDLLRMYERYAAGLNLKLNVLDAAESDLGGASKVVAEVTGDFAFRALKW 180

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E GVHRVQRVPATE+ GR+HTS ATVAVLPEA   +V++ L ++RID  R+ G+GGQ VN
Sbjct: 181 ERGVHRVQRVPATESQGRIHTSTATVAVLPEAEPGEVNLDLSEVRIDVFRSQGAGGQGVN 240

Query: 239 TTDSAVRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           TTDSAVR  +        +++    +SQ +NR +A++VL ARL + ER     +    R 
Sbjct: 241 TTDSAVRAVYRAGTPDEIMVICQDGRSQIKNREKALQVLTARLAERERAAREAQERQERA 300

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYK--LEYVLQGYIDDIINPLLTAHQAKMI 352
            Q+GSGDRSE+IRTYN+ Q R+TDHR+        L+ V+ G +  +++ L  A + + +
Sbjct: 301 SQVGSGDRSEKIRTYNYPQNRVTDHRLEGEDKNHPLDAVMAGGLAPVVSALARAQREEQL 360

Query: 353 GSASE 357
            + S+
Sbjct: 361 LAMSQ 365


>gi|228999928|ref|ZP_04159500.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
 gi|229007481|ref|ZP_04165078.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
 gi|228753869|gb|EEM03310.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
 gi|228759870|gb|EEM08844.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
          Length = 326

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 106/329 (32%), Positives = 165/329 (50%), Gaps = 16/329 (4%)

Query: 27  PSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEV 83
              D              +  ++ K    D+  +  +  H ++ +   +    +L     
Sbjct: 4   GFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 63

Query: 84  LAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALR 143
             + +            LL  D  D  + ILE+  G GG+E+  +   L RMY R+A  R
Sbjct: 64  SLVREMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118

Query: 144 KWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAAT 203
            +KV+ +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  +
Sbjct: 119 GFKVDTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178

Query: 204 VAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKS 261
             V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   SE+S
Sbjct: 179 CEVVPEFNDDIEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERS 238

Query: 262 QHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITD 318
           Q +NR  AMK+L+A+LY  + +    + +  R  Q  IG G    +IR+Y F     + D
Sbjct: 239 QIKNREHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWG---SQIRSYVFHPYSLVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           HR N  +  ++ V+ G ID  I+  L + 
Sbjct: 296 HRTNTEVGNVQAVMDGEIDPFIDAYLRSR 324


>gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 372

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 116/353 (32%), Positives = 177/353 (50%), Gaps = 10/353 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I  L++    +E   S            +    I  +  KI  + +   + +DL
Sbjct: 21  MRVSLDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDL 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      +       ++E   ++ E +    +    +L     D  + IL I AG GG
Sbjct: 81  KVLTELSLDEGNHEMAEELEKELLDLERKI--EDFKIEVLLNGPYDKNNAILSIHAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY R+A  + +KVE L     ++ G K +   I G   +  +K E GV
Sbjct: 139 TEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A V VLPE   + D++I  ED+ IDT RASG+GGQHVN T+
Sbjct: 199 HRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTE 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRI HIPTGI+V   +E+SQH+NR  A+K+L+A+L +++ K    +    +  Q  IG
Sbjct: 259 SAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIG 318

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            G+   +IR+Y F     + DHR    +  +E V+ G ID  IN  L   + +
Sbjct: 319 WGN---QIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLKKFRNE 368


>gi|228993892|ref|ZP_04153795.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
 gi|228765843|gb|EEM14494.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
          Length = 327

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 167/333 (50%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++ K    D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 + +            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKSLVREMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KV+ +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVDTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQH+NTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDDIEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    + +  R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|310815685|ref|YP_003963649.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
 gi|308754420|gb|ADO42349.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
          Length = 375

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 116/335 (34%), Positives = 177/335 (52%), Gaps = 5/335 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++ KIS  D  +++ +D   +I     ++E
Sbjct: 31  RLEEFNARVEDPTLWDNPEAAQKLMRDRQVLLDKISNVDALERDLRDNIELIEM--GEAE 88

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             D    E  A  + +R++  +     L     D     LEI +G GG+E+  +   L R
Sbjct: 89  GDDDVVAEAEAALRALRDVAGKKEIEALLDGEADGNDTFLEINSGAGGTESCDWASILAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + + VE+ S S  ++ G K +   ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYTVEMQSESPGEEAGIKSVSYKISGHNAYGWLKSESGVHRLVRISPYDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS ++V V P     I++++  +DIRIDT R+SG+GGQHVNTTDSAVRITH+PTGI
Sbjct: 209 ARRHTSFSSVWVYPVVDDNIEIEVQDKDIRIDTYRSSGAGGQHVNTTDSAVRITHLPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSS+KSQHQNR  AMK L++RLY +E  R     +   + + GS     +IR+Y    
Sbjct: 269 VVTSSQKSQHQNRDIAMKALKSRLYQIELDRRNAAINEAHESK-GSAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + + D R +      + VL G +D  +   L   
Sbjct: 328 YQMVKDLRTSHETSDTQGVLDGDLDGFMAATLAMD 362


>gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
 gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
          Length = 360

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 165/343 (48%), Gaps = 7/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK +  ++E R ++    D+          ++ + S + +Y Q + + +D   +  
Sbjct: 16  DLPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAKAISE 75

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   L + +    +              L     D K  +L I AG GG++A  
Sbjct: 76  LLELEEDTSLLQEAQTNLQQLNHEL--ERWELQQLLSGPYDAKGVLLTINAGAGGTDAQD 133

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   R +KV ++ SS+ D+ G K     I GR  +  +K E G HR+ R
Sbjct: 134 WAAMLLRMYTRWGEKRGYKVHLVESSEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVR 193

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +    A+G+  TS A V ++P   E   +V+IP +D+ I T RA G GGQ+VN  ++AVR
Sbjct: 194 ISPFNANGKRQTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETAVR 253

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + H+PTGI V  + E+SQ QN+ +A+ +L+A+L  +  ++ A E +  R   +       
Sbjct: 254 VVHLPTGIAVRCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEIRGDMVE-AAWGN 312

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR Y F   + + D R N+    +  V+ G +D  I   L  
Sbjct: 313 QIRNYVFHPYQMVKDLRTNVETSDIGAVMDGDLDAFIEAYLRQ 355


>gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232]
 gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394]
 gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180]
 gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429]
 gi|94990034|ref|YP_598134.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10270]
 gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096]
 gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750]
 gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
           10782]
 gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           MGAS8232]
 gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes
           MGAS10394]
 gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
           MGAS6180]
 gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus
           pyogenes MGAS9429]
 gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS10270]
 gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS2096]
 gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS10750]
 gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
           10782]
          Length = 337

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E  M+E    +  I   +    ++ +  K   +   ++   +   ++   + 
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  ++     + ++       LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSLKEELEENLMQ----LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS A+V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V+S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR
Sbjct: 237 TGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR N  L +++ V+ G I+  I+  L      
Sbjct: 294 SYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 337


>gi|322516704|ref|ZP_08069613.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
           49124]
 gi|322124737|gb|EFX96175.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
           49124]
          Length = 337

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E RM+E    +  I   +    ++ +  K   ++  ++   +    +     
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQDLNELKMKYETFNNMQELSDETELYLEMLEE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  I++  +  +  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSIQEELEETLEKLDKIMTSYE----MTLLLSEPYDHSNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY+RY   + +KVE L     D+ G K +     G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR    + +++ V+ G I+  I+  L     +
Sbjct: 294 SYVFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWRMEE 337


>gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166223629|sp|A2RLF5|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 365

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 92/343 (26%), Positives = 171/343 (49%), Gaps = 6/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E  M++    +      +     + + +K   Y       ++  T++ 
Sbjct: 25  DLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMNTMLEEAQTMLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +++  +  Q+E+  +   + +        ++     D  + +LEI  G+GG+E+  
Sbjct: 85  MLQEEAD--EDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHPGSGGTESQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+     +KVE+L   D D  G K +     GR  +  ++ E GVHR+ R
Sbjct: 143 WGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRGEKGVHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +V V+PE    I+V++   D+++DT R+ G+GGQ+VN   + VR+
Sbjct: 203 ISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNVNKVSTGVRL 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V ++ +++Q+ NR +AM +L+++LY +E  +   E    R  Q        +
Sbjct: 263 THVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ-SEISWGSQ 321

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y F   + + D R      ++  V+ G ID  IN  L  +
Sbjct: 322 IRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRWN 364


>gi|229099612|ref|ZP_04230540.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
 gi|229105789|ref|ZP_04236418.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
 gi|229118678|ref|ZP_04248030.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
 gi|228664870|gb|EEL20360.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
 gi|228677678|gb|EEL31926.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
 gi|228683908|gb|EEL37858.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
          Length = 326

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++ K    D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQH+NTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    +    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1]
 gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
 gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
 gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1]
 gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
 gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
 gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 326

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 110/333 (33%), Positives = 166/333 (49%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++      D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  +++I  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300]
 gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300]
          Length = 329

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 183/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             ++  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VEQLTELDKMMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+ +LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|238752991|ref|ZP_04614450.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
 gi|238708779|gb|EEQ01038.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
          Length = 310

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 107/316 (33%), Positives = 171/316 (54%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E +A+  I++ I   DQ  ++   L  +  + + +    +      +A    +    
Sbjct: 1   MGKERSALEEIVTTIDQLDQGMEDVSGLLELAIEADDEETFNEA-----IAELDILDGKL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +     D  +C L+++AG+GG+EA  +   L RMY R+A  R +K E++  SD
Sbjct: 56  GQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     I G   F  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +I
Sbjct: 116 GDVAGIKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D++I   D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK 
Sbjct: 176 DIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+LY+ E ++   ++    + K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLYEFEMQKKNADKQVLEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGDLDKFIEASLKA 308


>gi|218132301|ref|ZP_03461105.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992816|gb|EEC58817.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC
           43243]
          Length = 333

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 107/328 (32%), Positives = 168/328 (51%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D   K  E    +  +      Y++ KQ   D+ T+I     D E  +    E
Sbjct: 1   MEAPGFWDDADKSQEAMKELKSLKDSFEKYNELKQGMDDIETLIAMA--DEENDESLVPE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V        +  + +    L     D  + IL + AG GG+EA  +   L RMY R+A  
Sbjct: 59  VEEEFNVFEKKFDALRIGTLLSGEYDRDNAILTLHAGAGGTEACDWCQMLMRMYTRWAES 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +K EV+   + D+ G K +   I G   +  ++ E G+HR+ R+    A+G+  TS  
Sbjct: 119 KGYKTEVVDYLEGDEAGVKAVTIEIEGENAYGYLRSEHGIHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+  E  DV+I  +D+RIDT R+SG+GGQH+N T SA+RITH+PTGI+V   +E+
Sbjct: 179 SCDVMPDIEEDVDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQHQN+ +AM++L+A+LY ++++  A + S  R   +   +   +IR+Y       + DH
Sbjct: 239 SQHQNKDKAMQMLKAKLYLLKKQENAEKTSDIR-GDVKDVNFGSQIRSYVLQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N  +   + VL G ID  I   L   
Sbjct: 298 RTNEEVGNAQSVLDGNIDPFITAYLKWQ 325


>gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
           49296]
 gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
           49296]
          Length = 329

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 184/333 (55%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             ++  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VEQLTELDKMMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440]
 gi|189040004|sp|A4X3K6|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora
           tropica CNB-440]
          Length = 373

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/353 (29%), Positives = 163/353 (46%), Gaps = 10/353 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++   K R  E     S     D   +  +  + +S +  +I+   + +    D  
Sbjct: 24  LDIDRLRADKARLEE---AASAPDLWDDQARAQQVTSQLSYVNGEINKLAELRSRLDDAK 80

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    ++S+   L ++E           E  +    L     D +  ++ IRAG GG 
Sbjct: 81  VLLELAEAESDPGALTEVEAEVAGLAKAIDE--MEVRTLLSGEYDSREALVAIRAGAGGV 138

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA F   L RMY R+A    +  EV  +S  ++ G K    T+     +  +  ESG H
Sbjct: 139 DAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTH 198

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +  GR  TS A V VLP       +DIP  ++R D  R+SG GGQ VNTTDS
Sbjct: 199 RLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRFDVYRSSGPGGQSVNTTDS 258

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI+V   +EKSQ QN+  A++VL+ARL + +R+    +    +    GS  
Sbjct: 259 AVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERKRQEEQAKLQGLKTDAAGS-- 316

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
             +++R+Y     + + D R          V  G +D  I   +   + + + 
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTEQETGTPAAVFDGELDAFIEAGIRWRKQQQLA 369


>gi|315221796|ref|ZP_07863708.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
 gi|315189029|gb|EFU22732.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
          Length = 325

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/330 (30%), Positives = 177/330 (53%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q      +   ++     D  +++  + +
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYDNFQQMADLFDESEILLDFLAEDDSVQEELEEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +E ++   E      LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LAELETKMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 HGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I++++  EDI++DT R+ G+GGQ+VN   + VR+THIPTGI+  S+ ++
Sbjct: 177 SVEVMPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR    + +++ V+ G ID  I+  L   
Sbjct: 294 DHRTGFEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1873-00]
 gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC3059-06]
 gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC0288-04]
 gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
 gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974]
 gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
 gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
 gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
 gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
 gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
 gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1873-00]
 gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC0288-04]
 gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC3059-06]
 gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
 gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
 gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
 gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
 gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
 gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
          Length = 329

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 183/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             +      E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VAQ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|163816074|ref|ZP_02207444.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
 gi|158448884|gb|EDP25879.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
          Length = 370

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 97/345 (28%), Positives = 172/345 (49%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I +  +R A++   M +    D      +++ E   +  ++      +    +   L  
Sbjct: 26  DIENKTDRIAKLNYEMEQPSFWDDVDRSREVSRELKNLQDLVDNYKKLENDYLDIDTLIL 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + N  S I ++ +   +  ++            LL  D  DD + +L + +G GG+E
Sbjct: 86  MAEEENDSSLIPEIGEQIDIFKKEFEE-----YRINLLFTDEFDDCNAVLTLHSGEGGTE 140

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L+RMY R+A      VEVL   + D+ G K +   I+G   +  +K E GVHR
Sbjct: 141 SCDWASMLYRMYTRWAEKHGMSVEVLDFLEGDEAGIKSVTIQINGPHAYGYLKSEKGVHR 200

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    ++G+  TS A+  V+P+  +  +++I  EDIRIDT R+SG+GGQH+N T SA
Sbjct: 201 LVRISPFNSAGKRMTSFASCDVIPDIEQDLEIEIRDEDIRIDTYRSSGAGGQHINKTSSA 260

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH PTGI+V   +E+SQ  N+ +AM++L+++LY ++++      S  R  ++     
Sbjct: 261 IRITHFPTGIVVQCQNERSQLMNKNKAMQMLKSKLYLLKKQENLERISDIR-GEVTDNGF 319

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y       + D R +     +  VL G +D  +   L  
Sbjct: 320 GSQIRSYVLQPYTMVKDKRTSYENSNVSAVLDGDLDGFMTAYLKW 364


>gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes M1 GAS]
 gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005]
 gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1
           GAS]
 gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
           MGAS5005]
          Length = 337

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E  M+E    +  I   +    ++ +  K   +   ++   +   ++   + 
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  ++     + ++       LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSLKEELEENLMQ----LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     +K+EVL     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYTRFGNANGFKIEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS A+V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V+S+ +++Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR
Sbjct: 237 TGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR N  L +++ V+ G I+  I+  L      
Sbjct: 294 SYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 337


>gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803]
 gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803]
          Length = 326

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 110/333 (33%), Positives = 167/333 (50%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++ K    D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQVVINEANALKEMVGKFRKLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  AEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  +++I  ED++IDT RASG+GGQH+NTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|85702878|ref|ZP_01033982.1| peptide chain release factor 2 [Roseovarius sp. 217]
 gi|85671806|gb|EAQ26663.1| peptide chain release factor 2 [Roseovarius sp. 217]
          Length = 375

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           ++R  E   R+ +    D   +          ++  +  +D  KQE +D   +I     +
Sbjct: 29  RHRLEEFNARVEDPTLWDDPARAQSLMRERQALVDALDTHDSLKQELEDNLGLIELGEME 88

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
           ++   +++ E             E+  LL  +   +     LEI AG GG+E+  +   L
Sbjct: 89  NDTEVVSEAEAAIKALAKVAAAKELEALLDGEADSN--DTFLEINAGAGGTESCDWASML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  R + VE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +
Sbjct: 147 ARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPFD 206

Query: 193 ASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ + HTS ++V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITHIPT
Sbjct: 207 SAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHIPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSS+KSQHQNR  AMK L++RLY  E  R     +     + G      +IR+Y  
Sbjct: 267 GIVVTSSQKSQHQNRDIAMKALKSRLYQQELDRRNAAINEAHDAK-GDAGWGNQIRSYVL 325

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              + + D R  +     + VL G +D+ +   L  +
Sbjct: 326 QPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAMN 362


>gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
           700779]
 gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
           700779]
          Length = 325

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + +  + + ++  ++     D  ++D    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMDELQDEVEILLDFLAEDESVKDELVEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LSELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTNFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|125558711|gb|EAZ04247.1| hypothetical protein OsI_26391 [Oryza sativa Indica Group]
          Length = 457

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 165/353 (46%), Gaps = 9/353 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+   A +E + ++S   D   K  E   A++ +  ++ + +  K + ++  T++  
Sbjct: 105 LDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKSQVEEAETIVKL 164

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E   I K + +  +      L     D +  ++ I AG GG++A  +
Sbjct: 165 TEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDW 224

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R 
Sbjct: 225 ADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQ 284

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS A V V+P   E  +D  IP ED+ I   RA G GGQ+VN  ++AVR+
Sbjct: 285 SPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRM 344

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTGI V  + E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 345 VHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQ 403

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           IR Y F   + + D R       +  V+ G +D  I   L       + +A+E
Sbjct: 404 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKY----KLSAAAE 452


>gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 369

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 101/351 (28%), Positives = 171/351 (48%), Gaps = 13/351 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  +  R + +  +  +    +      +     + +  K S YD+ K+E  D+  +  
Sbjct: 26  DLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQTILKRKRSRYDEVKEELDDVSVMYE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                  + +L       +    +E   +    +L     D  + I+ +  G GG+E+  
Sbjct: 86  LAEEGEGMDELE-----QMLGAFQEKFEDFKLEMLLSGEYDSNNAIISLHPGAGGTESHD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  R +K++ L     D  G K     I G   +  +K E GVHR+ R
Sbjct: 141 WASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKSATLLIEGINAYGYLKTERGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   ++SGR HTS A++ V PE  +  +++I  +DIR+DT R+SG+GGQHVN T SA+RI
Sbjct: 201 ISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQHVNKTSSAIRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRS 303
           TH+PTG++V   +E+SQHQNR  AM +L+++L ++  +    +         QI  G   
Sbjct: 261 THLPTGVVVQCQNERSQHQNREVAMNMLKSKLVEIMAQEQKEKLEDVVGDYSQIAWG--- 317

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
            +IR+Y F     + DHR  + +  ++ V+ G +D  +N  L    A    
Sbjct: 318 SQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRFMNAELRKEAADASA 368


>gi|256370594|ref|YP_003108419.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009386|gb|ACU52746.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM]
          Length = 348

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 141/338 (41%), Positives = 216/338 (63%), Gaps = 11/338 (3%)

Query: 16  FAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           F  +   +S    +  Y K   L++EY  +  II+  +   + K   +++  ++     D
Sbjct: 17  FNSLSKLISTPEIIKNYKKYILLSKEYKFLYKIINYYNNLKKNKTNIKEIENLLK---KD 73

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
           SE+ +LA +E   +  E +++ N+I  LL  K+ +     ++E+RAGTGG EA +FV D+
Sbjct: 74  SELLELAFLEKKNLFLEKKKILNKIENLLKKKNYNK---ILMELRAGTGGDEACIFVEDI 130

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
           FRMY  Y     WK ++L+       GYKEI+  I G+ V+ ++KFESGVHRVQR+P TE
Sbjct: 131 FRMYTLYFKELGWKYDILNMQQGSIKGYKEIILEIEGKNVYDKLKFESGVHRVQRIPYTE 190

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           + GR+HTSA TVAV+P    + ++ I L D++ +T +ASG+GGQHVN T+SA+R+THIPT
Sbjct: 191 SQGRLHTSAITVAVIPENYYKNNIKIVLSDLKRETFKASGAGGQHVNKTESAIRLTHIPT 250

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           GI+     E+SQH+N  +A+KVLRAR+Y+ E K+     S  RK  I +G+RSE+IRTYN
Sbjct: 251 GIVAECQEERSQHKNYEKAIKVLRARIYNSEFKKKNELLSKKRKSLISTGERSEKIRTYN 310

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           + QGR+TDHRIN ++Y L++ + G ++++I  L    +
Sbjct: 311 YPQGRVTDHRINKSIYYLDHFMNGKLNEMITALQILEK 348


>gi|228942321|ref|ZP_04104860.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975250|ref|ZP_04135808.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981888|ref|ZP_04142183.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
 gi|228778000|gb|EEM26272.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
 gi|228784529|gb|EEM32550.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817365|gb|EEM63451.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 326

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++      D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQVVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    +    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|322385191|ref|ZP_08058838.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
           51100]
 gi|321270815|gb|EFX53728.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
           51100]
          Length = 325

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q  +   +   ++     D  +++  + +
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAEDDSVQEELEEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +EK +   E      LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LTELEKMMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|254477534|ref|ZP_05090920.1| peptide chain release factor 2 [Ruegeria sp. R11]
 gi|214031777|gb|EEB72612.1| peptide chain release factor 2 [Ruegeria sp. R11]
          Length = 374

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 120/339 (35%), Positives = 174/339 (51%), Gaps = 5/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D              ++  I  Y   KQE  D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDDADAAQALMRERQMLVDAIDTYKSIKQELADNIELIELGEMEDD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +   E   +  + +  E E+  LL  +   +     LEI AG GG+E+  +   L R
Sbjct: 91  NEVVKDAEEALVALKEKAAEKELEALLDGEADSN--DTFLEINAGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S S  D+ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS ++V V P     I++D+   DIR+DT R+SG+GGQHVNTTDSAVRITHIPTGI
Sbjct: 209 AKRHTSFSSVWVYPVVDDNIEIDVNPADIRVDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY  E  R   + +A  + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHEAK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R +      + VL G +D  +   L  + A  
Sbjct: 328 YQMVKDLRTSHETSDTKGVLDGDLDGFMAATLALNVAGK 366


>gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905]
 gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905]
          Length = 328

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 110/334 (32%), Positives = 169/334 (50%), Gaps = 16/334 (4%)

Query: 22  RMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M E    D              +  I+++    ++  +       ++       E  + 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEEIHENLDMTLELLR-----EEPDEE 55

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q E+     E ++   +    LL     D  + ILE+  G GG+E+  +   L RMY R
Sbjct: 56  LQEELGKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A  R +KVE +     D+ G K +  +I G   F  ++ E GVHR+ R+   ++SGR H
Sbjct: 116 WAEKRGFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS  +  V+PE  E  ++DI  ED++IDT RA+G+GGQH+NTTDSAVRITHIPTG +V  
Sbjct: 176 TSFVSCDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQC 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR +AM +L+ +LY +E ++   +    R  Q  IG G    +IR+Y F   
Sbjct: 236 QAERSQIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + DHR N     +  V+ G +D  IN  L + 
Sbjct: 293 SMVKDHRTNEETGNVGAVMDGDVDPFINAYLRSR 326


>gi|283479628|emb|CAY75544.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
           12163]
          Length = 310

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E +A+  ++  +    Q  ++   L  +  +   +    +         +K      
Sbjct: 1   MGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGE--- 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
             + +  +     D   C ++I+AG+GG+EA  +   L RMY R+A  + +K E++  SD
Sbjct: 58  --LEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            +  G K     I G   F  ++ E+GVHR+ R    ++ GR HTS ++V + PE    I
Sbjct: 116 GEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D++I   D+RID  RASG+GGQHVN T+SAVRITH+PT I+V   +++SQH+N+ +A K 
Sbjct: 176 DIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQ 235

Query: 273 LRARLYDVERKRMANER--SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY+ E ++   ++  + + K  IG G    +IR+Y     RI D R ++     + 
Sbjct: 236 LRAKLYEYEMQKKNADKQTAEDNKSDIGWG---SQIRSYVLDDSRIKDLRTSVETRNTQA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGDLDRFIEASLKA 308


>gi|255264706|ref|ZP_05344048.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
 gi|255107041|gb|EET49715.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
          Length = 375

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 172/341 (50%), Gaps = 9/341 (2%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSD 72
           R  E   R+ +    D      +       ++  I  Y+   QE  D   +I   +   D
Sbjct: 31  RLEEFNARVEDPTLWDDPEAAQKLMRDRQALVDAIKTYETISQELADNVELIELGEMEDD 90

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
           +++   A+  +  ++    + E       L     D     LEI AG GG+E+  +   L
Sbjct: 91  ADVVTEAETALATLKDAAAQKEL----EALLDGEADANDTFLEINAGAGGTESCDWASML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A    +KVE+ S S  D+ G K     ISG   +  +K ESGVHR+ R+   +
Sbjct: 147 ARMYVRWAEKAGYKVELQSESAGDEAGIKSASYKISGHNAYGWLKSESGVHRLVRISPFD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ + HTS  +V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PT
Sbjct: 207 SAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHAPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSSEKSQHQNR  AMK L++RLY +E  + +   +   +   G      +IR+Y  
Sbjct: 267 GIVVTSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHENA-GDAGWGNQIRSYVL 325

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
              + + D R +      + VL G +D ++   L  + A  
Sbjct: 326 QPYQMVKDLRTSFETSDTKGVLDGDLDGLMAATLAQNVAGK 366


>gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
          Length = 367

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            K+R  E+     +    +   +     +E   +  ++  +        + ++L  ++ +
Sbjct: 32  KKDRLEEVVGLSEDPDLWNDPKRAQDIGKERKLLEGVVLTLDKITNGIDDNRELIDMVVE 91

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                         ++A   E+ +   ++ +  +     D  +C ++I AG GG+EA  +
Sbjct: 92  EGD-----ADGFAAIIADVAELEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
            G L RMY RYA  + +KVEV+   D +  G       I G   +  ++ E+GVHR+ R 
Sbjct: 147 AGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLRTETGVHRLVRY 206

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS ++V V PE     +V+I   D+R DT RASG+GGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFSSVFVYPEVDDSFEVEINPADLRTDTYRASGAGGQHINKTDSAVRIT 266

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           HIPTGI+V + S +SQH+NR   M++LR++L+++E ++   E+ A    K  +G G    
Sbjct: 267 HIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEGKSDVGWG---S 323

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y     RI D R +  +   + VL G +D  I   L  
Sbjct: 324 QIRSYVLDSSRIKDLRTSYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|324990937|gb|EGC22872.1| peptide chain release factor RF2 [Streptococcus sanguinis SK353]
          Length = 325

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 180/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q  +   +   ++     D  ++   + +
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAEDESVQGELEEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +EK +   E      LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LAELEKMMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334]
 gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334]
          Length = 329

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 183/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  +++  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             +      E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VTQ----LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|319946614|ref|ZP_08020848.1| peptide chain release factor RF2 [Streptococcus australis ATCC
           700641]
 gi|319746662|gb|EFV98921.1| peptide chain release factor RF2 [Streptococcus australis ATCC
           700641]
          Length = 325

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 176/330 (53%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q      +   ++   + D    +    E
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLEFLSED----ESVHEE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +     E+ ++       LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 57  LEEKLIELDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 HGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G ID  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           rectale M104/1]
          Length = 330

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/327 (31%), Positives = 173/327 (52%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D   K   +   +  +   ++ Y + K++ +D+ T+I       E  +    E
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEM--GYEENDESLIPE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +  +     + I    L     D  + IL + AG GG+E+  +   LFRMY ++A  
Sbjct: 59  IQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +EVL S D D+ G K I   ++G   +  +K E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGFTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+  E  D+++  +DIRIDT R+SG+GGQH+N T SA+RITH P+GI+V   +E+
Sbjct: 179 SCDVMPDIEEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+ +AM++L+A+LY ++++  A + +  R  ++       +IR+Y       + DH
Sbjct: 239 SQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIR-GEVKEIGWGSQIRSYVLQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R ++     + VL G ID  IN  L  
Sbjct: 298 RTDVETGNADAVLDGNIDIFINGYLKW 324


>gi|117924338|ref|YP_864955.1| peptide chain release factor 2 [Magnetococcus sp. MC-1]
 gi|117608094|gb|ABK43549.1| bacterial peptide chain release factor 2 (bRF-2) [Magnetococcus sp.
           MC-1]
          Length = 379

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 172/343 (50%), Gaps = 16/343 (4%)

Query: 13  KNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           K R +E+E    +       +    +  E   +   I +    + +  + +DL  +  + 
Sbjct: 37  KERLSELESLAQDPNLWGDSERARTVMTEKNRLEKTIGEWDALNSESTDARDLLEMAQEE 96

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             DS +      +V AI K +  LE             D  +C +EI  G GG+E+  + 
Sbjct: 97  -GDSGMIAEVTAQVAAILKRLEGLELARM----LSGEADANNCFIEIHPGAGGTESQDWA 151

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY RY     +K E +     D+ G K +   + G   +  +K ESGVHR+ R+ 
Sbjct: 152 SILLRMYLRYCEKSGFKTEEVDYLAGDEAGIKSVTIKVEGDYAYGYLKVESGVHRLVRIS 211

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++S R HTS  +V V PE  +  +++I  +D+R+DT RASG+GGQHVN TDSA+RITH
Sbjct: 212 PFDSSARRHTSFTSVNVYPEIDDSIEIEILDKDLRVDTFRASGAGGQHVNKTDSAIRITH 271

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSER 305
            PTGI+V   S +SQH+NR  AMK+LRARL+ +E  +   A +  A+ K  I  G    +
Sbjct: 272 QPTGIVVQCQSGRSQHRNRDEAMKMLRARLFQLEMDKRAEAAQAVADAKSDIAWG---HQ 328

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y  +  R + D R +      + VL G +D  I   L+  
Sbjct: 329 IRSYVLAPYRLVKDLRTSYETGNTDAVLDGELDGFIKAALSQR 371


>gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
 gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
          Length = 337

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E RM+E    +  I   +    ++ +  K   ++  ++   +    +     
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  I++  +  +  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSIQEELEETLEKLDKIMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWADM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY+RY   + +KVE L     D+ G K +     G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ R HTS  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIP
Sbjct: 177 DSAKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIP 236

Query: 251 TGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           TGI+V S+ +++Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR
Sbjct: 237 TGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F+    + DHR    + +++ V+ G I+  I+  L     +
Sbjct: 294 SYVFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDACLKWRMEE 337


>gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 368

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 123/345 (35%), Positives = 191/345 (55%), Gaps = 10/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   K R  EIE  +S   + D+  KLT      S +   +S Y+Q    ++++   + 
Sbjct: 27  DLESQKQRLEEIEHELSRPGAWDSPEKLTPILKEKSGLEESVSKYEQLHSLQEEVREWLE 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             ++D    ++ Q    ++E   R+LE  +    L    DD+   I+ I  G GG+EA  
Sbjct: 87  FADNDQSG-EVLQALEDSLETLSRQLEK-VELEALLSGKDDNNPAIVSIHPGAGGTEAQD 144

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  L RMY R+A  + +K++ L     D+ G K +   ++G   +  +K E G+HR+ R
Sbjct: 145 WVEMLLRMYTRWAESKGFKLDYLDYLPGDEAGVKSVTLQVTGEYAYGLLKSERGIHRLIR 204

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +ASGR HTS A+V V P+ + +I++++  ED+R+D  +ASG GGQHVN T SA+RI
Sbjct: 205 ISPFDASGRRHTSFASVDVYPQVSDDINIEVKEEDMRVDVFKASGPGGQHVNKTSSAIRI 264

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           TH+PTGI+V   SE+SQ +NR  A+K+L+A+LYD E K++ +ER      K  I  G   
Sbjct: 265 THMPTGIVVQCQSERSQRRNRDAALKILKAKLYDEEMKKLEDERQEKYAAKDSIAWG--- 321

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IRTY     R + DHR N  +Y ++ VL G ID +I   L   
Sbjct: 322 SQIRTYTLHSYRLVKDHRNNTEIYDVDSVLDGNIDTLIRNYLLYR 366


>gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS]
 gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS]
 gi|123070429|sp|Q1BBL5|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|166225110|sp|A1UDD2|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           MCS]
 gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           KMS]
          Length = 371

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 168/347 (48%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L++R  ++E   S+    D   +  +  + +S   +++   ++ +Q  +DL  +  
Sbjct: 24  DVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEELRQRVEDLPVLYE 83

Query: 68  DH-NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                + +  + A  E  A   ++R     +    L     D++  ++ IR+G GG +AA
Sbjct: 84  MAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    + VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 144 DWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +D+P  D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V   +EKSQ QN++ AM+VL+A+L   +++    E  A  K   GS     
Sbjct: 264 LTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLARKKQEERAELDAL-KGDGGS-SWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R    +     VL G ID  +   +     +
Sbjct: 322 QMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWRNRR 368


>gi|323351855|ref|ZP_08087506.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
 gi|322121912|gb|EFX93644.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
 gi|324993198|gb|EGC25118.1| peptide chain release factor RF2 [Streptococcus sanguinis SK405]
 gi|324995500|gb|EGC27412.1| peptide chain release factor RF2 [Streptococcus sanguinis SK678]
 gi|325687821|gb|EGD29841.1| peptide chain release factor RF2 [Streptococcus sanguinis SK72]
 gi|325689974|gb|EGD31978.1| peptide chain release factor RF2 [Streptococcus sanguinis SK115]
 gi|325696780|gb|EGD38668.1| peptide chain release factor RF2 [Streptococcus sanguinis SK160]
 gi|327461467|gb|EGF07798.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1]
 gi|327469623|gb|EGF15092.1| peptide chain release factor RF2 [Streptococcus sanguinis SK330]
 gi|327473772|gb|EGF19190.1| peptide chain release factor RF2 [Streptococcus sanguinis SK408]
 gi|327489322|gb|EGF21115.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1058]
 gi|332359597|gb|EGJ37415.1| peptide chain release factor RF2 [Streptococcus sanguinis SK49]
 gi|332361549|gb|EGJ39353.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1056]
 gi|332362808|gb|EGJ40602.1| peptide chain release factor RF2 [Streptococcus sanguinis SK355]
 gi|332366326|gb|EGJ44078.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1059]
          Length = 325

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 180/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q  +   +   ++     D  ++   + +
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAEDESVQGELEEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +EK +   E      LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LAELEKMMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
 gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
          Length = 367

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 161/349 (46%), Gaps = 8/349 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ + AE+E + +     D   K     + +S    ++      +    DL  +  
Sbjct: 24  DLDALRAQVAELEEQAARPDLWDDQEKAQRVTSQLSHKQGELRRVTALRGRLDDLGVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +    A+ +    +       + +    L     D +  ++ +RA  GG +AA 
Sbjct: 84  LAEDEGDEGSAAEADTERAKLREEI--SSLEVRTLLSGEYDARDALVTVRAEAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    + V+V  +S  ++ G K     ++    +  +  E G HR+ R
Sbjct: 142 FAEMLLRMYSRWAERHNYAVDVFDTSYAEEAGIKSATFRVTAPYAYGTLSVEQGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P       V+I  +++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 202 ISPFDNQGRRQTSFAGVEVVPVVEQTDHVEIDEKELRVDVYRSSGPGGQGVNTTDSAVRL 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQ QN+  AM VL+A+L + +R+    +  A +      G+   +
Sbjct: 262 THIPTGIVVSCQNERSQLQNKATAMAVLQAKLLERQRQEEQAKMDALKDSGSSWGN---Q 318

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +R+Y     + + D R    +     VL G IDD +   +   + +   
Sbjct: 319 MRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLEAGIRWRKQRQTA 367


>gi|221639399|ref|YP_002525661.1| peptide chain release factor 2 [Rhodobacter sphaeroides KD131]
 gi|221160180|gb|ACM01160.1| Bacterial peptide chain release factor 2 [Rhodobacter sphaeroides
           KD131]
          Length = 375

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 177/349 (50%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +    +R  E +  + +    +      KL  E   +   +S   + D   ++  +L  
Sbjct: 24  DLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYKLIDTGLRDNVELIE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           + G+   D EI   A+  + A+ +  R  E       L     D     LEI AG GG+E
Sbjct: 84  L-GEAEGDEEIVTEAEAAIRALVETARAKEL----EALLDGEADGNDTFLEINAGAGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR
Sbjct: 139 SCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLKSESGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS ++V V P     I+++IP  DIRIDT R+SG+GGQHVNTTDSA
Sbjct: 199 LVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQHVNTTDSA 258

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PT I+VTSS KSQHQNR  AM  L+ARLY +E  +     +A  + + G     
Sbjct: 259 VRITHLPTNIVVTSSMKSQHQNREAAMNALKARLYQLELDKRNAAINAQHEAK-GEAGWG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y     + + D R  +     + VL G +D  +   L    A  
Sbjct: 318 NQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQDVAGK 366


>gi|146277893|ref|YP_001168052.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17025]
 gi|145556134|gb|ABP70747.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 375

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 118/349 (33%), Positives = 177/349 (50%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +    +R  E +  + +    +      KL  E   +   +S   + D   ++  +L  
Sbjct: 24  DLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLIDTGLRDNVELIE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           + G+   D+EI   A+  +  + +  R  E       L     D     LEI AG GG+E
Sbjct: 84  L-GEAEGDTEIVTEAEAAIRTLVETARAKEL----EALLDGEADGNDTFLEINAGAGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR
Sbjct: 139 SCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLKSESGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS ++V V P     I+++IP  +IRIDT R+SG+GGQHVNTTDSA
Sbjct: 199 LVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANEIRIDTYRSSGAGGQHVNTTDSA 258

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PT I+VTSS KSQHQNR  AM  L+ARLY +E  +     +A  + + G     
Sbjct: 259 VRITHLPTNIVVTSSMKSQHQNREAAMNALKARLYQMELDKRNAAINAQHEAK-GEAGWG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y     + + D R  +     + VL G +D  +   L    A  
Sbjct: 318 NQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQDVAGK 366


>gi|218514632|ref|ZP_03511472.1| peptide chain release factor 1 [Rhizobium etli 8C-3]
          Length = 236

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 153/223 (68%), Positives = 190/223 (85%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
                   + WKVEVLS+S+ + GGYKEI+ATI+GRGVF+++KFESGVHRVQRVP TEA 
Sbjct: 12  CMSASQPKKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAG 71

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           GR+HTSAATVAVLPEA EID++I  EDIRIDTMR+SG+GGQHVNTTDSAVRITH+P+GI+
Sbjct: 72  GRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIV 131

Query: 255 VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
           VTSSEKSQHQNR +AM+VLR+RLYD ER+R  +ERSA+RK Q+GSGDRSERIRTYNF QG
Sbjct: 132 VTSSEKSQHQNRAKAMQVLRSRLYDAERQRADSERSADRKSQVGSGDRSERIRTYNFPQG 191

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+TDHRINLTLYKL+ +++G I+++++ L+  +QA  +    E
Sbjct: 192 RVTDHRINLTLYKLDRMMEGEIEEVVDALMADYQASQLAQLGE 234


>gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 329

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 107/324 (33%), Positives = 160/324 (49%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L  E + +   +  I+       +  DL  +  +   D +       ++   
Sbjct: 3   NDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELA-ESEQDEDTAVAVIADLDNY 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           +  + +LE +           D  +  ++I+AG GG+EA  +   L RMY R+A  R WK
Sbjct: 62  QAHVEKLEFQRM----FSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  S  +  G K     I G   +  +K E GVHR+ R    ++  R HTS  +V V
Sbjct: 118 TELMEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFV 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE    I++DI   D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQ
Sbjct: 178 SPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQ 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           NR  AMK+L A+LY++E ++   E+ A    K  IG G    +IR Y   Q RI D R  
Sbjct: 238 NRDNAMKMLAAKLYELEVQKRNAEKDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D+ +   L A
Sbjct: 295 IERSDTQKVLDGDLDEFVEASLKA 318


>gi|77463535|ref|YP_353039.1| peptide chain release factor 2 [Rhodobacter sphaeroides 2.4.1]
 gi|332558415|ref|ZP_08412737.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
 gi|77387953|gb|ABA79138.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides 2.4.1]
 gi|332276127|gb|EGJ21442.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
          Length = 375

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 177/349 (50%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +    +R  E +  + +    +      KL  E   +   +S   + D   ++  +L  
Sbjct: 24  DLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLIDTGLRDNVELIE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           + G+   D EI   A+  + A+ +  R  E       L     D     LEI AG GG+E
Sbjct: 84  L-GEAEGDEEIVTEAEASIRALVETARAKEL----EALLDGEADGNDTFLEINAGAGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR
Sbjct: 139 SCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLKSESGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS ++V V P     I+++IP  DIRIDT R+SG+GGQHVNTTDSA
Sbjct: 199 LVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQHVNTTDSA 258

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PT I+VTSS KSQHQNR  AM  L+ARLY +E  +     +A  + + G     
Sbjct: 259 VRITHLPTNIVVTSSMKSQHQNREAAMNALKARLYQLELDKRNAAINAQHEAK-GEAGWG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y     + + D R  +     + VL G +D  +   L    A  
Sbjct: 318 NQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQDVAGK 366


>gi|126462391|ref|YP_001043505.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17029]
 gi|126104055|gb|ABN76733.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 375

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 176/349 (50%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +    +R  E +  + +    +      KL  E   +   +S   + D   ++  +L  
Sbjct: 24  DLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLIDTGLRDNVELIE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           + G+   D EI   A+  + A+ +     E       L     D     LEI AG GG+E
Sbjct: 84  L-GEAEGDEEIVTEAEASIRALVETAGAKEL----EALLDGEADGNDTFLEINAGAGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR
Sbjct: 139 SCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLKSESGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS ++V V P     I+++IP  DIRIDT R+SG+GGQHVNTTDSA
Sbjct: 199 LVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQHVNTTDSA 258

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           VRITH+PT I+VTSS KSQHQNR  AM  L+ARLY +E  +     +A  + + G     
Sbjct: 259 VRITHLPTNIVVTSSMKSQHQNREAAMNALKARLYQLELDKRNAAINAQHEAK-GEAGWG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y     + + D R  +     + VL G +D  +   L    A  
Sbjct: 318 NQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQDVAGK 366


>gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3]
 gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3]
          Length = 325

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 165/329 (50%), Gaps = 16/329 (4%)

Query: 27  PSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEV 83
              D              +  ++ K    D+  +  +  H ++ +   +    +L     
Sbjct: 4   GFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 84  LAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALR 143
             I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+A  R
Sbjct: 64  GLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118

Query: 144 KWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAAT 203
            +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  +
Sbjct: 119 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178

Query: 204 VAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKS 261
             V+PE  +  +++I  ED+++DT RASG+GGQH+NTTDSAVRITH PT  +V   SE+S
Sbjct: 179 CEVVPEFNDEVEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERS 238

Query: 262 QHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITD 318
           Q +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F     + D
Sbjct: 239 QIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSLVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           HR N  +  ++ V+ G ID  I+  L + 
Sbjct: 296 HRTNTEVGNVQAVMDGEIDPFIDAYLRSR 324


>gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258186|gb|EDS72152.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
           17244]
          Length = 364

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 171/341 (50%), Gaps = 6/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  LK+   + E  M++    +   K  +    +  + S+I+ Y   + ++ D+  ++  
Sbjct: 27  IKSLKDELVKKETLMNDESFWNENDKANKILKEVKSLKSQINSYSSLEYKKDDISVLVEM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D    +        +E E       I+ LL  +   +  + IL I  G GG+E+  +
Sbjct: 87  LQEDFSQNEADSAMEELLELEKELKVFTIDTLLSGEYDSN--NAILSIHPGAGGTESQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RM+ R+A  RK+K+++L     D  G K +   ISG   +  +K E GVHR+ R+
Sbjct: 145 AEMLLRMFIRFAEKRKFKIKILEQLPGDIAGIKSVTLLISGDNAYGYLKGEKGVHRLVRI 204

Query: 189 PATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ R HTS A+V V      +I+++I   D++IDT RA G+GGQHVN TDSAVRIT
Sbjct: 205 SPFDSNSRRHTSFASVDVEPEIKEDINLEINPSDLKIDTYRAGGAGGQHVNKTDSAVRIT 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PT I+V   +E+SQ QN+  AMK+L+ +LY +  +    +     K   G      +I
Sbjct: 265 HLPTKIVVSCQNERSQFQNKETAMKILKGKLYKILMEEHKEKIDEI-KGDYGQIAWGNQI 323

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y F     + DHR       ++ V+ G I+  I+  L  
Sbjct: 324 RSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIFIDAFLKM 364


>gi|15602055|ref|NP_245127.1| peptide chain release factor 2 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12720411|gb|AAK02274.1| PrfB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 320

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 99/324 (30%), Positives = 167/324 (51%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E  A+  +++ I   DQ  ++ + L  +  +   ++   +         
Sbjct: 3   NEPEKAQALGKERVALEGVVNTIHTLDQGLEDVEGLLELAIEAEDEATFHEAVAELEELE 62

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           ++  +     + +  +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K
Sbjct: 63  QQLAK-----LEFRRMFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  SD D  G K     +SG   F  ++ E+G+HR+ R    +++ R HTS +   V
Sbjct: 118 TELMEVSDGDVAGIKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFV 177

Query: 207 LPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE  +         D+RID  RASG+GGQHVN T+SAVRITHIP+GI+V   +++SQH+
Sbjct: 178 YPEIDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ + MK L+A+LY++E ++   ++    + K  IG G    +IR+Y     RI D R  
Sbjct: 238 NKDQCMKQLKAKLYEMELQKKNADKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D  I   L A
Sbjct: 295 VENRNTQAVLDGDLDRFIEASLKA 318


>gi|327459899|gb|EGF06239.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1057]
          Length = 325

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 180/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q  +   +   ++     D  ++   + +
Sbjct: 1   MTEPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAEDESVQGELEEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +EK +   E      LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LAELEKMMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|125717712|ref|YP_001034845.1| peptide chain release factor 2 [Streptococcus sanguinis SK36]
 gi|125497629|gb|ABN44295.1| Peptide chain release factor 2, putative [Streptococcus sanguinis
           SK36]
          Length = 325

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 105/330 (31%), Positives = 179/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q  +   +   ++     D    +L Q E
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAED----ELVQGE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +     E+ ++       LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 57  LEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|254776429|ref|ZP_05217945.1| peptide chain release factor 2 [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 370

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 163/346 (47%), Gaps = 5/346 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R  ++E   S+    D   +     + +S    ++   ++ +    DL  +  
Sbjct: 24  DVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEELRARLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + E    A  E  A  K +R          L     D++  ++ IR+G GG +AA 
Sbjct: 84  LAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAAD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 144 WAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 204 ISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVRL 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K + GS     +
Sbjct: 264 THIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDAL-KGEGGS-SWGNQ 321

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 322 MRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWRNRK 367


>gi|205375066|ref|ZP_03227857.1| hypothetical protein Bcoam_18782 [Bacillus coahuilensis m4-4]
          Length = 327

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/330 (32%), Positives = 170/330 (51%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M +    +   K        + +   +  Y    +  ++L         + +   LA++E
Sbjct: 1   MVDPDFWNDQQKAQGLINEANGLKDMVGQYHSMVEAHENLEVTFELVKEEGDEELLAELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               +   +   N     LL  +  D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 61  PELNDLTKQL--NNYELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K +  +I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 KGFKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  +  ++DI  ED++IDT RASG+GGQH+NTTDSAVRITH+PT  +V   SE+
Sbjct: 179 SCEVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR  AMK+L+++LY ++ +    + +  R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNREAAMKMLKSKLYQLKIEEQEAQLAEIRGEQKDIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N  +     V+ G +D  I+  L + 
Sbjct: 296 DHRTNTEVGNTNSVMDGDLDVFIDAYLRSR 325


>gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale
           ATCC 33656]
 gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale
           ATCC 33656]
          Length = 330

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/327 (31%), Positives = 173/327 (52%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D   K   +   +  +   ++ Y + K++ +D+ T+I       E  +    E
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEM--GYEENDESLIPE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +  +     + I    L     D  + IL + AG GG+E+  +   LFRMY ++A  
Sbjct: 59  IQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +EVL S D D+ G K I   ++G   +  +K E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGFTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+  E  D+++  EDIRIDT R+SG+GGQH+N T SA+RITH P+GI+V   +E+
Sbjct: 179 SCDVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+ +AM++L+A+LY ++++  A + +  R  ++       +IR+Y       + DH
Sbjct: 239 SQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIR-GEVKEIGWGSQIRSYVLQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R ++     + VL G ID  IN  L  
Sbjct: 298 RTDVETGNADAVLDGNIDIFINGYLKW 324


>gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
 gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
          Length = 340

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 117/334 (35%), Positives = 171/334 (51%), Gaps = 11/334 (3%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
            E+E +MSE    +                  I  Y+Q   + +DL  +I       E  
Sbjct: 6   EELEYKMSEEDFWNDPENAQSVLKKAKGYRDTIEEYNQLHVDHEDLEMMISFIEDGDESF 65

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
               ++     + +     EI    L K   D  + I+ I AGTGG +A  +   L RMY
Sbjct: 66  QKDLLKG---LEALENRVREIKIATLLKGEYDKNNAIISIHAGTGGLDAQDWAKMLLRMY 122

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  + + V+ L    + + G K +   I G   +  +K E GVHR+ R+   ++SG+
Sbjct: 123 TRWAEDKGYGVKTLDILTDTEAGIKSVTLLIEGMNAYGYLKAEKGVHRLVRISPFDSSGK 182

Query: 197 VHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A+V V+PE  +  D+ I   D+RIDT RASGSGGQHVN TDSAVRITHIPTGI+V
Sbjct: 183 RHTSFASVDVMPEIDDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIPTGIVV 242

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFS 312
              +E+SQH NR  AMK+L ++L +V+      +    +    QI  G    +IR+Y F+
Sbjct: 243 QCQNERSQHSNRETAMKMLISKLIEVKETEQKEKIEDLQGEYNQIAWG---SQIRSYVFN 299

Query: 313 QG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               + DHR N+ +  ++ V+ G ID+ IN  L 
Sbjct: 300 PYNLVKDHRTNVEMGNIQAVMDGEIDEFINGYLK 333


>gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 368

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 12/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEE 59
                +I   + + AE+E +M E    D      KL +E AA+   +        K ++ 
Sbjct: 19  MRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELAALKGGVDTYKGLMAKYEDA 78

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           + L+ + G    D+ + D  + E+  I + +  L       +L     D    IL + AG
Sbjct: 79  ETLYEM-GIEEGDASMEDDIRAELDLIAEGLETL----QLEVLLSGDYDANDAILTLHAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+EA  +   L RMY R+A    + VE       D+ G K     I G   +  +K E
Sbjct: 134 AGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSATLFIKGHNAYGFLKSE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVN 238
            GVHR+ R+   ++  R HTS +   V+PE  +       ++D+R+D  RASG+GGQH+N
Sbjct: 194 KGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQHIN 253

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T SAVR+TH PTGI+V   +E+SQ QN+ + MK+LRA+L+++E+++   E +    +Q 
Sbjct: 254 KTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGVQQ 313

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +   +IR+Y F     + D R N     ++ V+ G +D  I   L A
Sbjct: 314 K-IEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGELDPFIRAYLNA 362


>gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
 gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
          Length = 334

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 170/330 (51%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    D      +  +   A+   +   ++  ++ +E + L  +  + N  S I ++ 
Sbjct: 1   MEEPDFWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYEENDASLILEIQ 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     I          I    L     D    I+ + AG GG+E+  + G L+RMY R+
Sbjct: 61  ETLDSFIATF-----ENIRIRTLLSGEYDKNDAIVTLHAGAGGTESCDWAGMLYRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + + VEVL   D ++ G K +   + G   +  +K E GVHR+ R+    A+G+  T
Sbjct: 116 ADKKGYTVEVLDYLDGEEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFNAAGKRQT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+P+  E  D++I  ED+RIDT R+SG+GGQH+N T SAVRITH+PT I+V   
Sbjct: 176 SFVSCDVMPDIEEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QN+ +AM++L+A+LY ++++  A + S  R  ++       +IR+Y       +
Sbjct: 236 NERSQFQNKDKAMQMLKAKLYLLKQQENAEKVSGIR-GEVKEIGWGNQIRSYVMQPYTMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N     ++ V+ G ID  IN  L  
Sbjct: 295 KDHRTNAETGNVDSVMDGNIDLFINAYLKW 324


>gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift
           [Dehalococcoides ethenogenes 195]
 gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift
           [Dehalococcoides ethenogenes 195]
          Length = 362

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 172/343 (50%), Gaps = 8/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I   +    E+E   +            +    ++       ++   +Q   DL  +  
Sbjct: 20  DIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRGLEQRVNDLLELFA 79

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D  + +  + EV  +  EI  LE      L      D ++ +L + AG GG E+  
Sbjct: 80  LTHEDPSLGNEIEREVNTLTAEIDTLEVG----LAFSGQYDSRNALLTVHAGAGGVESQD 135

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L RM+ R+A  + + +EVL  S  ++ G K     I G   +  +K E GVHR+ R
Sbjct: 136 WAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIR 195

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A    HTS A V V+PEA +  D+DI  EDI+ID  R+SG GGQ+V    +AVR+
Sbjct: 196 LSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRV 255

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIP+GI+V + +E+SQHQNR  AM++L ++L  VE  + A ER+  +  +I S +   +
Sbjct: 256 THIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERI-SAEWGNQ 314

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y       + DHR +  +   E VL+G +D  IN  L  +
Sbjct: 315 IRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFINAYLRQN 357


>gi|118580454|ref|YP_901704.1| peptide chain release factor 2 [Pelobacter propionicus DSM 2379]
 gi|118503164|gb|ABK99646.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
           propionicus DSM 2379]
          Length = 361

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 172/347 (49%), Gaps = 17/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   +    EIE +++     D       + +E  ++  I+    ++D   ++++D+  
Sbjct: 13  DVDGKRESIQEIESKIAAPGFWDNADSSQGILKERTSLEKIV---QLWDSLVRQQEDVRV 69

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I     +++   L ++  +    +         +  +     D  SC + I  G GG+E
Sbjct: 70  MIELGEEEADEETLKEVGEMNNRLQQGV--EAAEFQRMLSGEHDRNSCFISINPGAGGTE 127

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY RY   + WK  +      D+ G K    ++SG   +  +K E+G+HR
Sbjct: 128 SQDWAEMLLRMYLRYCEKKGWKTSITDYQSGDEAGIKSATFSVSGEYAYGYLKAEAGIHR 187

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIP--LEDIRIDTMRASGSGGQHVNTTDS 242
           + R+   +++ R HTS A+V   PE  E D+DI     D+R+DT R+ G+GGQHVNTTDS
Sbjct: 188 LVRISPFDSNARRHTSFASVYAFPEIEEEDIDIKIADSDLRVDTFRSGGAGGQHVNTTDS 247

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGS 299
           AVRITH+PT I+V   SE+SQ  NR  AMKVLRA+LY+ E +      S     K +IG 
Sbjct: 248 AVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEVQERTARASEIASEKKEIGW 307

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           G    +IR+Y       + D R  +     + VL G +++ +   L 
Sbjct: 308 G---SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEEFVVAYLM 351


>gi|66810982|ref|XP_639198.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
 gi|60467811|gb|EAL65826.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
          Length = 430

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 144/328 (43%), Positives = 204/328 (62%), Gaps = 3/328 (0%)

Query: 30  DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKE 89
               K+++E    +  +       +K +E ++L T++ +   +   + +        ++E
Sbjct: 102 SEIKKISKELQETAEPLGYFGDLIEKLKELKELQTMLVEETDEDGKQMIKSDINKLKQEE 161

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           I  LE ++ + LLP   DD    ILEIRAGTGGSEA LF  D++ MY  Y   + W  E 
Sbjct: 162 IEPLEKQLLFSLLPGSKDDAGDAILEIRAGTGGSEAQLFTQDVYEMYRSYCLQKGWTFEP 221

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           L  S  + GGY+++  ++SG+GVF  +K+ESGVHRVQRVP TE  GR+HTS  TVA+LPE
Sbjct: 222 LELSVTEVGGYRDVTVSVSGKGVFGFLKYESGVHRVQRVPLTETQGRIHTSTITVAILPE 281

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLR 268
             ++D+ I   D+++D  R+SG+GGQ VNTTDSAVRITH+PTGI V    E+SQHQNR +
Sbjct: 282 PKDVDIQIHDRDLKVDIYRSSGNGGQSVNTTDSAVRITHLPTGITVAMQDERSQHQNRSK 341

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKL 328
           AMK+L+AR+Y+ ER R+ NER + R  QIGS  RSERIRTYN+ Q RITDHR+++    L
Sbjct: 342 AMKILKARIYERERIRLQNERVSERNAQIGSALRSERIRTYNYPQDRITDHRVSIN-GNL 400

Query: 329 EYVLQGY-IDDIINPLLTAHQAKMIGSA 355
              +    +D  I+ +L     K +   
Sbjct: 401 NSCMNSDGLDSFIDEILVEFHTKELEEL 428


>gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1]
 gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1]
          Length = 378

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 101/355 (28%), Positives = 169/355 (47%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK   A++E + +E    D      +  + +S   S++       Q  +D  T+I 
Sbjct: 25  DVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIEDTKTLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   +++ +            +++    L     D +S ++ IR+G GG +AA 
Sbjct: 85  LGQEEGDADSMSEAQEELGNIAHEL--DDMEVQTLLDGEYDARSAVVTIRSGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K +++ +S  ++ G K     +     + R+  E G HR+ R
Sbjct: 143 FAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  T  + V V+P   A   +DIP  DIR+DT +ASG GGQ VNTT SAVRI
Sbjct: 203 ISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRI 262

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRS 303
           TH+PTG++V+   E+SQ QNR  AM VL++RL  ++      E +A +K   G       
Sbjct: 263 THLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK----HAEEAAKKKELAGDIKASWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G ID  I   +     + + +  E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAAQKE 373


>gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 338

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 170/327 (51%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    D   K T        +  ++  + + +QE +D+  +I     +++   L    
Sbjct: 1   MEEPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYEEND-ASLIPEI 59

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              +      LE     LLL  + D   + IL + AG GG+E+  +   L+RMY R+A  
Sbjct: 60  EEMLGHFSDTLEKMRMKLLLSGEYDS-NNAILRLNAGAGGTESCDWCSMLYRMYCRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +K EVL   D D+ G K +   I+G   +  ++ E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGFKTEVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  ++P+  E  D++I  +DIRIDT R+SG+GGQH+N T SA+RITH P+G +V   +E+
Sbjct: 179 SCDIMPDIQEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVVTCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QN+ +AM++L+++L+ ++++  A + +  R   +       +IR+Y       + DH
Sbjct: 239 SQFQNKDKAMQMLKSKLFLLKQEEQAAKAAGIR-GDVKDNGWGSQIRSYVLQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R       ++ VL G ID  I+  L  
Sbjct: 298 RTGEESGNVDAVLDGNIDSFISAYLRW 324


>gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
 gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
          Length = 376

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 10/338 (2%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R AE+     +    +   K  +     + +   ++   + ++E  D   +I     ++E
Sbjct: 31  RLAELNKLAEDPNLWNDPQKAQKLMQERTSLEDALTGIGKVERELTDNIDMIEL--GEAE 88

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             +    E     K +++         L     D     LE+ AG GG+E+  +   L R
Sbjct: 89  GDEGIVKEAEEALKALKKEVARRELEALLSGEADRFDTYLEVHAGAGGTESQDWASMLLR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A    +K+E L  SD ++ G K     ISG   +  +K E+GVHR+ R+   +++
Sbjct: 149 MYVRWAEKHGFKIEYLEESDGEEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPFDSN 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS ++V + P     I +DI   D+R DTMR+ G+GGQHVN T+SAVR+THIPTG+
Sbjct: 209 ARRHTSFSSVQIFPVIDDSIKIDIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGV 268

Query: 254 -MVTSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYN 310
            +V  + +SQH+NR +A  +LRARLY++E K+           K +IG G    +IR+Y 
Sbjct: 269 AVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQAAKTEIGWG---HQIRSYV 325

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               + + D R  +       VL G +D+ +   L   
Sbjct: 326 LQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363


>gi|147669189|ref|YP_001214007.1| peptide chain release factor 2 [Dehalococcoides sp. BAV1]
 gi|146270137|gb|ABQ17129.1| bacterial peptide chain release factor 2 (bRF-2) [Dehalococcoides
           sp. BAV1]
          Length = 356

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 172/343 (50%), Gaps = 8/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +    E+E   S            +    ++       ++   ++   DL  +  
Sbjct: 15  DVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELAV 74

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  + +  + E+  +  E+  LE      L      D+++ +L + AG GG E+  
Sbjct: 75  LSREDPSLSNEIEHEISGLTAELDSLEVG----LAFSGQYDNRNALLTVHAGAGGVESQD 130

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L RM+ R+A  + + +E+L  S  ++ G K     I G   +  +K E GVHR+ R
Sbjct: 131 WAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIR 190

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A    HTS A V ++PEA +  D+DI  EDI+ID  R+SG GGQ+V    +AVR+
Sbjct: 191 LSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRV 250

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIP+GI+V + +E+SQHQNR  AM++L ++L  VE  + A ER+  +  +I S +   +
Sbjct: 251 THIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERI-SAEWGSQ 309

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y       + DHR +  +   E VL+G +D  I+  L  +
Sbjct: 310 IRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQN 352


>gi|260575218|ref|ZP_05843218.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
 gi|259022478|gb|EEW25774.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
          Length = 375

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 172/345 (49%), Gaps = 5/345 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E+   + +        +  +       ++  IS +   +   +D   +I    ++ +
Sbjct: 31  RLEEMNAMIEDGDLWSDPARAQKLMRERQALLDAISTHKLIETGLRDNVELIEMGEAEGD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +++ E    +     L        L     D     LE+ AG GG+E+  +   L R
Sbjct: 91  AEIVSEAEQALRDLVE--LARGKELEALLDGEADGNDTFLEVNAGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S SD ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSMSDGEEAGIKSAAYKISGPNAYGWLKSESGVHRLVRISPYDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS ++V V P     I++DIP  DIRIDT R+SG+GGQHVNTTDSAVRITH+PT I
Sbjct: 209 ARRHTSFSSVWVYPVVDDNIEIDIPAGDIRIDTYRSSGAGGQHVNTTDSAVRITHLPTNI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSS KSQHQNR   M  LRARLY +E  +     +A  + + G      +IR+Y    
Sbjct: 269 VVTSSMKSQHQNREACMVALRARLYQLELDKRNAAVNAQHEAK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            + + D R  +     + VL G +D  +   L    A    + ++
Sbjct: 328 YQMVKDLRTGVETSDTQGVLDGDLDRFMAATLAMDVAGKSRAEAQ 372


>gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           rectale DSM 17629]
          Length = 330

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/327 (31%), Positives = 173/327 (52%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D   K   +   +  +   ++ Y + K++ +D+ T+I       E  +    E
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEM--GYEENDESLIPE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +  +     + I    L     D  + IL + AG GG+E+  +   LFRMY ++A  
Sbjct: 59  IQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWAAMLFRMYSKWADK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +EVL S D D+ G K I   ++G   +  +K E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGFTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+  E  D+++  EDIRIDT R+SG+GGQH+N T SA+RITH P+GI+V   +E+
Sbjct: 179 SCDVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+ +AM++L+A+LY ++++  A + +  R  ++       +IR+Y       + DH
Sbjct: 239 SQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIR-GEVKEIGWGSQIRSYVLQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R ++     + VL G ID  IN  L  
Sbjct: 298 RTDVETGNADAVLDGNIDIFINGYLKW 324


>gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 370

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L+ R  E+E++ S+    +      +  + +S   +++    + +    DL  +  
Sbjct: 24  DLEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQAELRRVTELRSRLDDLPVLYE 83

Query: 68  DHNSDS-EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              ++  +    A  +      ++R     +    +     D +  ++ IR+G GG +AA
Sbjct: 84  LAEAEEGDAGVSATEDADTERADLRRDIEAMEVKTMLAGEYDPREALVNIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A      VEV  +S  ++ G K     +    ++  +  E G HR+ 
Sbjct: 144 DWAQMLMRMYIRWAEQHGHSVEVYDTSYAEEAGLKSATFAVKAPYMYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V VLP       +DI   D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +TH+PTGI+V   +EKSQ QN++ AM+VL+A+L + +R+    +  A  K   G      
Sbjct: 264 LTHVPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKRQEERAQMDAL-KSDTG-ASWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R N+       VL G +D  I   +     +
Sbjct: 322 QMRSYVLHPYQMVKDLRTNVESNNPSAVLDGELDQFIEAGIRWRMDE 368


>gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1]
 gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum
           reducens MI-1]
          Length = 332

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 103/335 (30%), Positives = 163/335 (48%), Gaps = 12/335 (3%)

Query: 23  MSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    D      K++++ A +   ++  +  +   Q+ + +  +  +        + +
Sbjct: 1   MLKDGFWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQEEQDPLLEEEFS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                   +            ++     D    IL +  G GG+E+  +   L RMY RY
Sbjct: 61  SELSTLTGRLEEM-----ELEIMLAGPYDRGDAILSLHPGAGGTESQDWAQMLLRMYTRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +KVE+L     D+ G K     ++G   +  ++ E GVHR+ R+   +A+GR HT
Sbjct: 116 CENHNYKVEILDLLPGDEAGIKSATIQVTGPNAYGYLRCEKGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V VLP    E++V+I  ED+RIDT RA G+GGQHVN TDSAVRITH+PTGI+V   
Sbjct: 176 SFASVDVLPLVDDEVEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ  NR  AMK+L+++L D+E ++  +E +A R  Q        +IR+Y F      
Sbjct: 236 NERSQTTNRQAAMKLLKSKLIDLELQKKEDEMAALRGEQ-KDIAWGSQIRSYVFHPYSLA 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            DHR       +  V+ G I   +   L     K 
Sbjct: 295 KDHRTGEETGNVNAVMDGNIGQFVTAYLKYMAGKK 329


>gi|83951928|ref|ZP_00960660.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
 gi|83836934|gb|EAP76231.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
          Length = 375

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 119/337 (35%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K+R  E   R+ +    D   K  +       ++  I  +D   QE  D   +I     +
Sbjct: 29  KHRLEEFNARVEDPNLWDDPAKAQKLMRERQSLVDAIDTHDAINQEMSDNIELIELGEME 88

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            +       E  +  K ++E         L     D     LEI AG GG+E+  +   L
Sbjct: 89  GDNE--VIGEAESALKSLKEKAGAKELEALLNGEADANDTFLEINAGAGGTESCDWASML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  R + VE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +
Sbjct: 147 ARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ + HTS ++V V P    +I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PT
Sbjct: 207 SAAKRHTSFSSVWVYPVVDDDIEIEVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHHPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSSEKSQHQNR  AMK L++RLY +E  R   + +A  + + G      +IR+Y  
Sbjct: 267 GIVVTSSEKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHEAK-GDAGWGNQIRSYVL 325

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              + + D R N+     + VL G +D  +   L  +
Sbjct: 326 QPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAMN 362


>gi|319951472|ref|ZP_08025281.1| peptide chain release factor 2 [Dietzia cinnamea P4]
 gi|319434864|gb|EFV90175.1| peptide chain release factor 2 [Dietzia cinnamea P4]
          Length = 368

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 102/358 (28%), Positives = 168/358 (46%), Gaps = 17/358 (4%)

Query: 2   VFLSHKQ---ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQE 58
              + ++   I +L  R  E+E   ++    +   +  +  + +S I + +    + +Q 
Sbjct: 15  TMTTVEKVLDIDELARRVDELEQMAADPDLWNDQDRAQKVTSELSYIQADLRRCRELRQR 74

Query: 59  EQDL---HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
            +DL   + +  +   D+     A+   L  +         +    +     D +  ++ 
Sbjct: 75  IEDLPLMYELAEEEGGDAVEEADAERASLREDV------EAMEVKTMLSGEYDQREAVVN 128

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           IRAG GG +AA F   L RMY R+A     KVEV  +S  ++ G K     +    ++  
Sbjct: 129 IRAGAGGVDAADFAEMLMRMYVRWAEKNGHKVEVYDTSYAEEAGIKSATFIVKDPYMYGT 188

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGG 234
           +  E G HR+ R+   +  GR  TS A V VLP       +++P  ++R+D  R+SG GG
Sbjct: 189 LSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETVDSIEVPENEVRVDVYRSSGPGG 248

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+THIPTGI+V   +EKSQ QN++ AMKVL+A+L + +R+       A  
Sbjct: 249 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKRQEERAAMDALG 308

Query: 294 KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
               G+     ++R+Y     + + D R    +     VL G ID  I   +     +
Sbjct: 309 SG--GNASWGNQMRSYVLHPYQMVKDLRTEHEVNNPSAVLDGDIDGFIEAGIRWRMRE 364


>gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
 gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
          Length = 355

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 177/349 (50%), Gaps = 10/349 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A+ E  M+     D   +  E+ AA++ +  +   +   + + ++L     
Sbjct: 9   DLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAE 68

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++ +     + E+      ++E         L     D    ILEI  G GG+EA  
Sbjct: 69  MLQAEPDPE--LKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQD 126

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    + VE  +    ++ G K +   I G   +  +  E GVHR+ R
Sbjct: 127 WGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVR 186

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS A+V V+P     I+V+I   D+R+DT RASG+GGQH+N T+SAVRI
Sbjct: 187 ISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRI 246

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRS 303
           TH+PTGI+  + +E+SQ QNR+ AM +L+++LY++E ++ A ER+     Q  IG G   
Sbjct: 247 THLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQKEIGWG--- 303

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y F     + D R     + +  V+ G +D  IN  L  + A+ 
Sbjct: 304 SQIRSYVFHPYTLVKDARTGYETHDVVGVMDGDLDPFINAYLQWNLAQK 352


>gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
 gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
 gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
 gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium sp. P08]
          Length = 371

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 168/342 (49%), Gaps = 8/342 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  EAKKAEIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D +   L +     ++       + +   +L     D++  ++ IR+  GG +AA F 
Sbjct: 90  TADDDKESLTEATSETVKLREEI--DALEVRILLSGQYDEREAVVTIRSEAGGVDAADFA 147

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+ 
Sbjct: 148 EMLLRMYLRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLSVEQGTHRLVRIS 207

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+TH
Sbjct: 208 PFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTH 267

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++R
Sbjct: 268 LPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QMR 324

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +Y     + + D R N  +   + V  G IDD I   +   +
Sbjct: 325 SYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIGAGIRWRR 366


>gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1087-00]
 gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
 gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
 gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
 gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
 gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200]
 gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1087-00]
 gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
 gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
 gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
 gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
 gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200]
          Length = 329

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 182/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             +      E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VAQ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+ + A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|163731562|ref|ZP_02139009.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
 gi|161395016|gb|EDQ19338.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
          Length = 374

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 173/345 (50%), Gaps = 5/345 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  ++ +D  KQE  D   +I     + +
Sbjct: 31  RLEEFNARVEDPTLWDDPDAAQKLMRDRQMLVDAMATHDNIKQEMADNIELIELGEMEDD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
                  +     + + E   +     L     D     LE+ AG GG+E+  +   L R
Sbjct: 91  --ADVITDAENALRALEETAAKKELEALLDGEADSNDTFLEVNAGAGGTESCDWANMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S SD D+ G K     I+G   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS ++V V P     ID+D+   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFSSVWVYPVVDDNIDIDVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHHPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R     +   + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHENK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            + + D R N      + VL G +D  +   L    +    + ++
Sbjct: 328 YQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALDASGKTRAEAQ 372


>gi|328945974|gb|EGG40121.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1087]
          Length = 325

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 180/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q  +   +   ++     D  ++   + +
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFMAEDESVQGELEEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +EK +   E      LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LAELEKMMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|229020397|ref|ZP_04177152.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
 gi|229026626|ref|ZP_04182968.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
 gi|228734659|gb|EEL85311.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
 gi|228740876|gb|EEL91119.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
          Length = 326

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/333 (32%), Positives = 166/333 (49%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++      D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMSAGFWDDQQGAQTVINEANALKDMVGSFRQLDETFENLEMTHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKTLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQH+NTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    +    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|319650621|ref|ZP_08004761.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
 gi|317397802|gb|EFV78500.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
          Length = 331

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/331 (32%), Positives = 173/331 (52%), Gaps = 16/331 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M +    D         +  + +  ++  +    +  ++L     ++ + +      DL 
Sbjct: 1   MLQPGFWDDQQAAQVVISESNSLKEQVVEFHDLYETFENLELTYELVKEESDAELQADLE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +     +++            LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  EELKDLVKRLND-----FELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     D+ G K +  +I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKKGFKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++DI  ED++IDT RASG+GGQH+NTTDSAVRITH+PT ++V   
Sbjct: 176 SFVSCEVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ +NR RAMK+L+A+LY  + +    E +  R  Q  IG G    +IR+Y F    
Sbjct: 236 TERSQIKNRERAMKMLQAKLYQKKIEEQEAELAEIRGEQKDIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + DHR N  +  ++ V+ G +D  IN  L 
Sbjct: 293 MVKDHRTNTEVGNVQGVMDGDLDMFINAYLR 323


>gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
           51172]
          Length = 329

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 110/331 (33%), Positives = 162/331 (48%), Gaps = 8/331 (2%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84
                D   K     A +S     +  Y   +   +D   +I       E       EV 
Sbjct: 2   SPNFWDNSDKAQTVMADLSDKKEDLKAYTDIEDAIKDNKDLIDLVELSDEDESKTLEEVD 61

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRK 144
           +  K+I++    +          D  +  L I AG GG EA  +   LFRMY RY   R 
Sbjct: 62  SNLKQIKKSLASLKLKTQLNGEYDKNNAYLSINAGAGGLEATDWADMLFRMYTRYCEKRG 121

Query: 145 WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATV 204
           +KVEV   ++ + GG K +   + G   +  +K E GVHR+ R+   ++  R HTS ++V
Sbjct: 122 FKVEVKDLNNEEAGGIKSVTLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFSSV 181

Query: 205 AVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
            V PE   +  ++I   D+RIDT RASG+GGQHVN TDSAVRITHIPTG++  + +E+SQ
Sbjct: 182 DVFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQ 241

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG-RITDH 319
            QNR  AM +L ++L  ++ +    +    +    QI  G    +IR+Y F     + DH
Sbjct: 242 MQNRETAMNLLISKLIQIKEEEKKEKIEDIQGSYSQIAWG---SQIRSYVFQPYTMVKDH 298

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R N  +  +E V+ G I   I+  L  +Q K
Sbjct: 299 RTNYEMGNVEAVMDGDIQGFIDAYLAQNQNK 329


>gi|242242124|ref|ZP_04796569.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144]
 gi|242234437|gb|EES36749.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144]
          Length = 332

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 105/338 (31%), Positives = 168/338 (49%), Gaps = 17/338 (5%)

Query: 23  MSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +   K  +      A+  I+S          +      ++ +   +   ++L 
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      E+  +         LL     D  + ILE+  G GG+E+  + G L RMY+RY
Sbjct: 61  EEVQQFEEQIDQ-----YELQLLLDGPHDANNAILELHPGAGGTESQDWAGMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 CEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V  
Sbjct: 176 SFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNN 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG G    +IR+Y F   
Sbjct: 236 QNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             + DHR N    K++ V+ G I   I   L     + 
Sbjct: 293 SMVKDHRTNEETGKVDAVMDGEIGPFIEAYLRKEMDRQ 330


>gi|296129092|ref|YP_003636342.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
 gi|296020907|gb|ADG74143.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
          Length = 371

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 175/350 (50%), Gaps = 15/350 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD-- 68
            L+ + AE+  + S     D      +  +A+S   S++   D+ +    DL T++    
Sbjct: 28  ALRAKIAELSEQASVPNLWDDPEAAQKVTSALSSAQSELERVDKLRGRIDDLETLVEMAA 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D++    A+ E++ I K++ ELE       L     D +  ++ IRAG GG +AA F
Sbjct: 88  EEDDADTLAEAEAELVGIRKDLGELE----IRTLLAGEYDVRDAVVTIRAGAGGVDAADF 143

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    +   VL +S  ++ G K     +     F  +  E+G HR+ R+
Sbjct: 144 AEMLLRMYLRWAERHGYATSVLDTSYAEEAGLKSATFEVKAPYAFGHLSVEAGTHRLVRI 203

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V V+P       V+IP  +I++D  R+SG GGQ VNTTDSAVR+T
Sbjct: 204 SPFDNQGRRQTSFAAVEVIPLIEQTDSVEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMT 263

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRSE 304
           HIPTGI+V+  +EKSQ QNR  A++VL++RL  V ++    E  A +K   G       +
Sbjct: 264 HIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRQE----EERAAKKELAGDIKASWGD 319

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           ++R+Y     + + D R    +     V  G IDD I   +   +A+ + 
Sbjct: 320 QMRSYVLQPYQMVKDLRTEHEVGNPASVFDGDIDDFIEAGVRWRRAQQLE 369


>gi|57866389|ref|YP_188014.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
 gi|71153101|sp|Q8CPZ1|RF2_STAES RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71153102|sp|Q5HQX5|RF2_STAEQ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|57637047|gb|AAW53835.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
          Length = 371

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 171/349 (48%), Gaps = 17/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHT 64
            + + +    E E  M++    +   K  +      A+  I++          +      
Sbjct: 25  DLENKETNIQEYEEMMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +    +L +      E+  +         LL     D  + ILE+  G GG+E
Sbjct: 85  LLQEEYDEDMKIELEEEVQQFEEQIDQ-----YELQLLLDGPHDANNAILELHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +V  L RMY+RY     +KVE +     D+ G K +   I G   +  +K E GVHR
Sbjct: 140 SQDWVSMLLRMYQRYCEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           + R+   ++SGR HTS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+S
Sbjct: 200 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 259

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGS 299
           A+RITH PTGI+V   +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG 
Sbjct: 260 AIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGW 319

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           G    +IR+Y F     I DHR N    K++ V+ G I   I   L   
Sbjct: 320 G---SQIRSYVFHPYSMIKDHRTNEETGKVDAVMDGEIGPFIEAYLRKE 365


>gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC
           13129]
 gi|76363349|sp|Q6NIM2|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae]
          Length = 369

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 8/345 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            DL++R  E+E + S+    D      +    +S + +K+      +Q   DL  +    
Sbjct: 26  EDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKLKKLSTLRQRIDDLPVMYELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D E  D   +    + +   ++E  +    +     D +  ++ IR+G GG +AA + 
Sbjct: 86  --DEEGEDALALADEELAELTADVEA-LEVKTMLSGEYDSREAVINIRSGAGGVDAADWA 142

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     KV++   S  ++ G K     + G  ++ ++  E G HR+ R+ 
Sbjct: 143 EMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRIS 202

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A + VLP       +DIP  ++R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 203 PFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTH 262

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++R
Sbjct: 263 IPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL--GAGGNASWGNQMR 320

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +Y     + + D R N  +   + VL G ID ++   +    A+ 
Sbjct: 321 SYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLLEAGIRWRMAEQ 365


>gi|300114892|ref|YP_003761467.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
 gi|299540829|gb|ADJ29146.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
          Length = 331

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 15/335 (4%)

Query: 18  EIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           E++  ++     D      +L +E A +  ++S ++   ++  + ++L  +  + + +  
Sbjct: 2   EVDRELAVPSVWDEPERAQQLGQERAQLQSVVSPLAELGEEIMQAKELFELAVEEDDEGT 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
            +++     +A    + +   ++ +  +     D  +  L+I+AG+GG+EA  +   L R
Sbjct: 62  AQEM-----IAELDAVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWASMLLR 116

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+     +K  +   S+ +  G K       G   F  ++ E+GVHR+ R    ++ 
Sbjct: 117 MYLRWGEKHDFKTGLTEVSEGEVAGIKSATIHFEGEYAFGWLRTETGVHRLVRKSPFDSG 176

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS A+V V PE  E  D++I   D+RIDT RASG+GGQHVN TDSAVRITH+ + +
Sbjct: 177 NRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLSSNL 236

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSERIRTYN 310
           +V   SE+SQHQN+  AM  LRA+LY++E +    E+  +   K  IG G    +IR Y 
Sbjct: 237 VVQCQSERSQHQNKAHAMAQLRAKLYELEMRSRQAEKQAAEEAKADIGWG---SQIRNYV 293

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             Q RI D R  + +   + VL G +D  I   L 
Sbjct: 294 LDQSRIKDLRTGVEIGNTQGVLDGDLDPFIEASLK 328


>gi|110680026|ref|YP_683033.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
 gi|123361814|sp|Q165J6|RF2_ROSDO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|109456142|gb|ABG32347.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
          Length = 374

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 173/345 (50%), Gaps = 5/345 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  ++ +D  KQE  D   +I     + +
Sbjct: 31  RLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDSIKQEMADNIELIELGEMEDD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
                  +     + + E   +     L     D     LE+ AG GG+E+  +   L R
Sbjct: 91  --ADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEVNAGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S SD D+ G K     I+G   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS ++V V P     ID+++   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFSSVWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHHPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R     +   + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHENK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            + + D R N      + VL G +D  +   L    +    + ++
Sbjct: 328 YQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALDASGKTRAEAQ 372


>gi|78356848|ref|YP_388297.1| peptide chain release factor 2 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219253|gb|ABB38602.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 358

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 128/345 (37%), Positives = 182/345 (52%), Gaps = 16/345 (4%)

Query: 15  RFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  EIE ++S   + +A  KLT    E + +   ++++    Q K + Q    +  + N+
Sbjct: 22  RLEEIEKQLSSPDAWNAPEKLTPVLREKSQLENSVARLDALRQAKDDMQGWLELAEEENT 81

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
              +  L           +  L  E    LL    +D  + ILEI  G GG+EA  +   
Sbjct: 82  QEVLEQLE-----EQAGILEALLEETEVGLLLSAEEDKHAAILEIHPGAGGTEAQDWAEM 136

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A   ++K E L   D D+ G K +   I G   +  +K E G+HR+ R+   
Sbjct: 137 LLRMYVRWAESHEFKAEYLDYLDGDEAGIKSVTLKIDGTNAYGLLKGEKGIHRLIRISPY 196

Query: 192 EASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +ASGR HTS A+V V+P+A  EI +DI   D+RID  R+SG GGQ VNTT SAVR+THIP
Sbjct: 197 DASGRRHTSFASVDVIPDAGEEITIDIKDSDLRIDIFRSSGPGGQSVNTTSSAVRVTHIP 256

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIR 307
           TGI     +EKSQH N+  AM++LRARLY+ E +R   E+ A+   K  IG G    +IR
Sbjct: 257 TGITAQCQNEKSQHHNKETAMQILRARLYEAEIRRRDAEKQADYASKEAIGWG---SQIR 313

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           TY     R + DHR N  +  +E VL G +D ++   L     + 
Sbjct: 314 TYTLQPYRLVKDHRSNFEVGDVEAVLDGELDALMRNHLLYQHERR 358


>gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
 gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
          Length = 356

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   ++    D      ++   +  + +++S     +    D    + 
Sbjct: 7   DVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDAQATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  D +  +    E      ++R+  +      L     D +  +L I AG GG++A  
Sbjct: 67  LYELDPD--EDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 125 WAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+  E   +DIP +D+ I T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L A+L  + +++ A E +  R   I       +
Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R N     ++ V+ G +D  I+  L  
Sbjct: 304 IRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDACLRQ 345


>gi|163739752|ref|ZP_02147160.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107]
 gi|163741027|ref|ZP_02148420.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
 gi|161386018|gb|EDQ10394.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
 gi|161386982|gb|EDQ11343.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107]
          Length = 374

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 118/339 (34%), Positives = 174/339 (51%), Gaps = 5/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D              ++  I  Y   KQ+  D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDDADAAQALMRDRQMLVDAIDTYKSIKQDLSDNMELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              ++  E      + +  E E+  LL  +   +     LEI AG GG+E+  +   L R
Sbjct: 91  AEVISDAEAALKTLKEKAAEKELEALLDGEADSN--DTFLEINAGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS ++V V P     I++D+   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHEPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R   + +A  + + G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQLELDRRNADINAAHEAK-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R +      + VL G +D  +   L  + A  
Sbjct: 328 YQMVKDLRTSHETSDTKGVLDGDLDGFMAATLALNVAGK 366


>gi|154250427|ref|YP_001411252.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
 gi|154154363|gb|ABS61595.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
          Length = 364

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 111/341 (32%), Positives = 179/341 (52%), Gaps = 8/341 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            D K +  E+E    +    +   K  +    I  I   +   ++ K   +D+   I   
Sbjct: 22  EDKKEKLKELESETLKPDFWNDQKKAQQINREIQRIRRIVEDMEKIKVLFEDIEVGIELA 81

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D  +++  +  V  + ++IRE E      L+     D  +  L I  G GG+E+  + 
Sbjct: 82  EEDPSMQEHLEQIVDEVGEKIREFEL----ALILNGKFDGSNAYLSIHPGAGGTESQDWA 137

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + + VE++   + ++ G K     I G   +  +K+E GVHR+ R+ 
Sbjct: 138 SMLLRMYMRWAERKGFSVELVDYQEGEEAGIKSATLYIKGDFAYGYLKYERGVHRLVRIS 197

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ R HTS A+V VLP    +ID++I  ED+R+DT RASG+GGQ+VN T+SA+RITH
Sbjct: 198 PFDANKRRHTSFASVNVLPEIEDDIDIEIRPEDLRVDTYRASGAGGQYVNKTESAIRITH 257

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQ QNR  AMK+L+ARLY +E ++   +     + ++       +IR
Sbjct: 258 LPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIEQI-QGELRDISWGNQIR 316

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F     + DHR ++    +E V+ G ID  I   L  +
Sbjct: 317 SYVFQPYTMVKDHRTDVETGNIEAVMDGEIDMFIEAELVYY 357


>gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
 gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
          Length = 370

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 171/349 (48%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            + +L +R  E+E + ++    D      +  +A+S   +K+   D  +    DL  +  
Sbjct: 24  DVDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDSLRGRLDDLSVMYE 83

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  SDS+  ++A  E   +   I  LE             D++  ++ IR+G GG +A
Sbjct: 84  LAEEESDSDAVEMADAERAELRAAIESLEVTTM----LSGPYDEREAVINIRSGAGGVDA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A +   L RMY R+A     KVEV  +S  ++ G K     + G  ++  +  E G HR+
Sbjct: 140 ADWAEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTLSVEQGAHRL 199

Query: 186 QRVPATEASGRVHTSAA-TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A    +        +DIP  D+RID  R+SG GGQ VNTTDSAV
Sbjct: 200 VRISPFDNQGRRQTSFAEVEVLPVVEETDHIDIPESDLRIDVYRSSGPGGQSVNTTDSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +EKSQHQN+  AM+VL+A+L + +R+    E  A      G+    
Sbjct: 260 RLTHVPTGIVVTCQNEKSQHQNKASAMRVLQAKLLEKKRQEERAELDAL--GAGGNASWG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            ++R+Y     + + D R    +   + VL G +D  I   +    A+ 
Sbjct: 318 NQMRSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFIEAGIRWRMAQQ 366


>gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
 gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
          Length = 372

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 168/346 (48%), Gaps = 13/346 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           H  +   +    E+  R+ +    D   +  +     + I   +  +    +   D  T+
Sbjct: 25  HFDVDAREEELRELNARIEDPTLWDRPEEAQKLMQEKTRIERTLQTFHNSTEALDDALTL 84

Query: 66  IGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                  SD + +  A   + +++ E+  LE             D +S  L+I AG+GG+
Sbjct: 85  FEMGAEESDPDTQMEAVETLDSVQAELEALELARM----LGGETDAESAFLDINAGSGGT 140

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA  +   L RMY R+A  + +K E++  +  ++ G K    +I G   +  +K E GVH
Sbjct: 141 EAQDWAEMLLRMYLRWAERKGFKTELMECTAGEEAGIKSATVSIKGEYAYGFLKAEVGVH 200

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R    ++  R HTS A+V   P+  +  ++DI   D+R DT RASG+GGQH+N TDS
Sbjct: 201 RLVRKSPYDSGNRRHTSFASVFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDS 260

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGS 299
           AVR+TH+PT I+V   +++SQH+NR  A  +L+ARLY+ E      E+      K  IG 
Sbjct: 261 AVRLTHVPTNIVVQCQNDRSQHKNRAAAWSMLKARLYEHELNLRNAEKQEIEDGKTDIGW 320

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           G    +IR+Y   Q RI D R  +     +  L G ID  I   L 
Sbjct: 321 G---HQIRSYVLDQSRIKDLRTGMETGNTQAFLDGDIDAFIQAELM 363


>gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98]
          Length = 327

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 111/333 (33%), Positives = 168/333 (50%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E+   D              +  ++ K    D+  +  +  H ++ +        +L 
Sbjct: 1   MMEAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDKDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKSLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED+++DT RASG+GGQHVNTTDSAVRITHIPT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G ID  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|302342486|ref|YP_003807015.1| LigA [Desulfarculus baarsii DSM 2075]
 gi|301639099|gb|ADK84421.1| LigA [Desulfarculus baarsii DSM 2075]
          Length = 371

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 178/346 (51%), Gaps = 16/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R AE++  +  +   +       +  E   ++  + ++   ++  ++ + L  + 
Sbjct: 22  ESKTKRLAELDKIVGANDFWEDQNAAKAVMRERTDLAQSLEELDALNRSMEDAEVLLELA 81

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +  S   ++ Q         +      +    L    DD +  IL I AG GG++A 
Sbjct: 82  VEEDDASLTAEIDQAH-----DALERQIGRLEAARLLGGPDDHRGAILAINAGAGGADAQ 136

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R+Y RYA  + ++V  L     D+ G K +   I+G   +  +K ESGVHR+ 
Sbjct: 137 DWAQMLTRLYGRYAERQGFQVVELDFQAGDEAGVKSVTMEINGPRAYGLLKGESGVHRLV 196

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +AS R HT+ A+V V P+   +I++++   DIRIDT RASG+GGQHVN T SAVR
Sbjct: 197 RISPFDASHRRHTAFASVYVSPQVDDDIEIEVKDADIRIDTYRASGAGGQHVNKTSSAVR 256

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDR 302
           ITH PTG++V   +EKSQH+N+  AMKVLRARLY++E  +   E+        +I  G  
Sbjct: 257 ITHFPTGVVVQCQNEKSQHRNKDMAMKVLRARLYELEIHKREAEKREVHASHQEIAWG-- 314

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y  +  R + DHR  + +  ++ VL G +DD I   L   
Sbjct: 315 -SQIRSYVLAPYRLVKDHRTGVEVGNVDSVLDGQLDDFIQGYLLWR 359


>gi|325694230|gb|EGD36146.1| peptide chain release factor RF2 [Streptococcus sanguinis SK150]
          Length = 325

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 179/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      + Q  +   +   ++     D  ++   + +
Sbjct: 1   MTEPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAEDESVQGELEEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +EK +   E      LL  +  D+ + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LAELEKMMTSYE----MTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++   E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKQVAEVDSLKGDKKEISWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           perforans 91-118]
 gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           perforans 91-118]
          Length = 329

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/324 (33%), Positives = 160/324 (49%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L  E + +   +  I+       +  DL  +  +   D +       ++   
Sbjct: 3   NDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELA-ESEQDEDTALAVIADLDNY 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           +  + +LE +           D  +  ++I+AG GG+EA  +   L RMY R+A  R WK
Sbjct: 62  QAHVEKLEFQRM----FSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  S  +  G K     I G   +  +K E GVHR+ R    ++  R HTS  +V V
Sbjct: 118 TELMEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFV 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE    I++DI   D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQ
Sbjct: 178 SPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQ 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           NR  AMK+L A+LY++E ++   E+ A    K  IG G    +IR Y   Q RI D R  
Sbjct: 238 NRDNAMKMLAAKLYELEVQKRNAEKDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D+ +   L A
Sbjct: 295 IERSDTQKVLDGDLDEFVEASLKA 318


>gi|294786673|ref|ZP_06751927.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
 gi|294485506|gb|EFG33140.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
          Length = 377

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 99/356 (27%), Positives = 174/356 (48%), Gaps = 15/356 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--I 66
           +  L+ + AE+E + S     D         + +S   ++     +  Q   D+ T+  +
Sbjct: 26  LDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTEAGQRLDDIDTLYSL 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
           G    D + +  A  E+  + K++ ++E +           D+++ ++ IR+G GG +AA
Sbjct: 86  GMEEEDEDSKQEAWSELKKLSKDLSDIEIQTL----LDGEYDNRAAVVTIRSGAGGVDAA 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   ++KV+V+ +S  ++ G K     +     + ++  E G HR+ 
Sbjct: 142 DWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKLSVEGGTHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   + + R  TS A V V+P       +D+P  D+R+DT  + G GGQ VNTT SAVR
Sbjct: 202 RISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQGVNTTYSAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDR 302
           +TH+PTGI+V    E+SQ QNR  AM VL++RL  ++++    E +A +K   G      
Sbjct: 262 LTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQE----EEAAKKKELAGDIKASW 317

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            +++R+Y     + + D R        + V  G ID  I+  +     +   +  E
Sbjct: 318 GDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWRHQQRKEARQE 373


>gi|328949576|ref|YP_004366911.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM
           14884]
 gi|328449900|gb|AEB10801.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM
           14884]
          Length = 367

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/352 (30%), Positives = 172/352 (48%), Gaps = 9/352 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I   + R AE+E  +++    +   +        + I   +  Y   + + + L  +  
Sbjct: 18  DIPAKERRLAELEAELNDPNLWNDAERARRISQEAARIRRTVETYRTLEADLEGLVELWN 77

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           + + +       + E    + E    E       L      +K+ IL I+ G GG+EA  
Sbjct: 78  ELDPEEREALAGEAEEAQKKLEALYHE------TLLTFPHAEKNAILTIQPGAGGTEACD 131

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R A    + VEV+  +   + G       + G   +  +  E+GVHR+ R
Sbjct: 132 WAEMLLRMYRRLADRLGFSVEVVDVTPGAEAGIDYAQIIVRGENAYGLLSVENGVHRLVR 191

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               +ASGR HTS A V V+PE  +  +V+I  ED+RID  R+ G GGQ VNTTDSAVRI
Sbjct: 192 PSPFDASGRRHTSFAGVEVMPEVDDTVEVEIKPEDLRIDVFRSQGHGGQGVNTTDSAVRI 251

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTGI+V   + +SQH+N+  A+KVL++RL+ +E K+   E +  R  ++   +   +
Sbjct: 252 VHLPTGIIVTCQNTRSQHKNKEIALKVLKSRLFQLEWKKKQEELAKLR-GEVKPIEWGSQ 310

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           IR+Y   +  + DHR  L  +  + VL G I+D I   L     +    A++
Sbjct: 311 IRSYVLDKQYVKDHRTGLMRHDPQNVLDGDIEDFIWAGLEWKAGRREAVAAD 362


>gi|149202750|ref|ZP_01879722.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
 gi|149144032|gb|EDM32066.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
          Length = 375

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           ++R  E   R+ +    D   +          ++  +  +D  K E +D   +I    ++
Sbjct: 29  RHRLEEFNARVEDPTLWDDPARAQTLMRERQALVDALETHDGIKNELEDNLGLIELGEAE 88

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
           S+   + + E             E+  LL  +   +     LEI AG GG+E+  +   L
Sbjct: 89  SDAEVVGEAEAAIKALAKVAAAKELEALLDGEADSN--DTFLEINAGAGGTESCDWASML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  R + VE+ S S  D+ G K     ISG   +  +K ESGVHR+ R+   +
Sbjct: 147 ARMYVRWAEKRGYTVELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPFD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ++ + HTS ++V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH+PT
Sbjct: 207 SAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHMPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSS+KSQHQNR  AMK L++RLY +E  R     +     + G      +IR+Y  
Sbjct: 267 GIVVTSSQKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHDAK-GDAGWGNQIRSYVL 325

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              + + D R  +     + VL G +D+ +   L  +
Sbjct: 326 QPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAMN 362


>gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           N315]
 gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
 gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
 gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
 gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
 gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
 gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
 gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981]
 gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 330

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 168/333 (50%), Gaps = 17/333 (5%)

Query: 23  MSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+E    D   K  +      A+  I++       +  +      ++ +   +    DL 
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+RY
Sbjct: 61  QEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 CEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V  
Sbjct: 176 SFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNN 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F   
Sbjct: 236 QNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + DHR N    K++ V+ G I   I   L  
Sbjct: 293 SMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 325


>gi|291397162|ref|XP_002714988.1| PREDICTED: mitochondrial translational release factor 1-like
           [Oryctolagus cuniculus]
          Length = 380

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 138/314 (43%), Positives = 204/314 (64%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++   +  +K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+ +I  LL+P
Sbjct: 63  ELVAAAKLLSEKEQELRETEHLLRDENED--LRRLAENEITLCQKEITQLKQQIVLLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   +LE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLVLEVTAGIGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ +  +D+R
Sbjct: 181 SASIGGSEAYKLMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTEINLVVNPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTGI+     E+SQ +NR  AMK L A+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNREMAMKKLCAKLYSMHL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   ++R   RK+Q+G+  RSE+IRTYNF Q R+TDHRIN +++ LE  ++G   +D++I
Sbjct: 301 EEETSKRYNARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSVHDLEAFMKGDYQLDEMI 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKDYANYESLLE 374


>gi|229817216|ref|ZP_04447498.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
           20098]
 gi|229785005|gb|EEP21119.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
           20098]
          Length = 373

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 173/355 (48%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  LK + AE+E + +E    D      +  + +S   S++   +   Q   D+ T+  
Sbjct: 25  DMDRLKAQIAELEQQAAEPGLWDDPENAQKVTSRLSAAQSQLKRLNSASQRIDDVETLVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G    D++    AQ EV  I+ ++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGQEEEDADTLAEAQEEVKKIQSDLDDMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY RY     +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +DIP  DIR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDSDIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTG++V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHLPTGLVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G +D  I   +     +     +E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDLDGFIQAGIRWRHEQRHAEDAE 373


>gi|126434177|ref|YP_001069868.1| peptide chain release factor 2 [Mycobacterium sp. JLS]
 gi|166225109|sp|A3PWV0|RF2_MYCSJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|126233977|gb|ABN97377.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           JLS]
          Length = 371

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 167/347 (48%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L++R  ++E   S+    D   +  +  + +S   +++   ++ +Q  +DL  +  
Sbjct: 24  DVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEELRQRVEDLPVLYE 83

Query: 68  DH-NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                + +  + A  E  A   ++R     +    L     D++  ++ IR+G GG +AA
Sbjct: 84  MAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    + VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 144 DWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +D+P  D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V   +EKSQ QN++ AM+VL+A+L   +++       A  K   GS     
Sbjct: 264 LTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLARKKQEERAALDAL-KGDGGS-SWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R    +     VL G ID  +   +     +
Sbjct: 322 QMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWRNRR 368


>gi|114561768|ref|YP_749281.1| peptide chain release factor 2 [Shewanella frigidimarina NCIMB 400]
 gi|114333061|gb|ABI70443.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           frigidimarina NCIMB 400]
          Length = 320

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 101/323 (31%), Positives = 160/323 (49%), Gaps = 12/323 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E AA+  ++  I   D   ++ Q L  +  + + +    D A       
Sbjct: 3   NEPERAQALGKERAALVVVVKTIDDMDTGLEDIQGLLELAIEEDDEETFNDAAAELEELD 62

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
            +        + +  +     D  +C L+I++G+GG+EA  +   + RMY R+     + 
Sbjct: 63  TRLAD-----LEFRRMFSGKSDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYS 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  +D D  G K      +G   F  M+ E+GVHR+ R    ++SG+ HTS  +V V
Sbjct: 118 PELMEVTDGDVAGIKGATIKFTGEYAFGWMRTETGVHRLVRKSPFDSSGKRHTSFCSVFV 177

Query: 207 LPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE  +         D+RIDT RASG+GGQHVN TDSA+RITH+PT  +V   +++SQH+
Sbjct: 178 YPEIDDDIEIDINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPTNTVVQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           NR  A K L+A+LY++E  +     + + + K  IG G    +IR+Y     RI D R  
Sbjct: 238 NRDSAFKQLKAKLYELEMHKQNADKQAAEDAKSDIGWG---SQIRSYVLDDARIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLT 345
           +     + VL G +D  I   L 
Sbjct: 295 VENRNTQTVLDGDLDKFIEASLK 317


>gi|253575894|ref|ZP_04853228.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251844688|gb|EES72702.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 342

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 175/339 (51%), Gaps = 6/339 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
            +   A  E +M+     D   K     A ++ + S +  Y   + E       +    +
Sbjct: 2   KQEMIANYEEKMAAPDFWDDNEKAQGIIAEMNAVKSSVDQYTALQNEYD--ELEMMAELA 59

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + E  +    EV    +++ +   E    LL     D  + ILE+  G GG+E+  +   
Sbjct: 60  EEEGDESLAAEVADSVEKLVKKLEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQM 119

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A  R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   
Sbjct: 120 LLRMYTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPF 179

Query: 192 EASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +ASGR HTS  +  V+PE ++  +++I  ED++IDT RASG+GGQH+NTTDSAVRITHIP
Sbjct: 180 DASGRRHTSFVSCDVVPEISDDVEIEIRNEDLKIDTYRASGAGGQHINTTDSAVRITHIP 239

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI+V   +E+SQ +NR RAM +LR++LY+ + +    E    R  Q        +IR+Y
Sbjct: 240 TGIVVTCQNERSQIKNRERAMTMLRSKLYERKIEEQQRELDEIRGEQ-SDIAWGSQIRSY 298

Query: 310 NFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            F     + DHR N+    +  V+ G +D  I+  L + 
Sbjct: 299 VFHPYSMVKDHRTNVETGNVGAVMDGDLDAFIDGYLRSQ 337


>gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 367

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 158/345 (45%), Gaps = 10/345 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L  R  E+E +  +    D      +  + +S   +K+   +  +   +D+  +    
Sbjct: 26  EALAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLESLRVRLEDMPVMYELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             + +               +      +    +     D +  ++ IR+G GG +AA + 
Sbjct: 86  EEEGDT-----SLADDELDSLESAIESLEVTTMLSGEYDPREAVINIRSGAGGVDAADWA 140

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     KV+V   S  ++ G K     + G  ++ ++  E G HR+ R+ 
Sbjct: 141 EMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRIS 200

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 201 PFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQSVNTTDSAVRLTH 260

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++R
Sbjct: 261 IPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAELDAL--GAGGNASWGNQMR 318

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +Y     + + D R N  +     VL G ID  +   +     + 
Sbjct: 319 SYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWRMQQQ 363


>gi|47459025|ref|YP_015887.1| peptide chain release factor 1 [Mycoplasma mobile 163K]
 gi|61214626|sp|Q6KIA0|RF1_MYCMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|47458353|gb|AAT27676.1| peptide chain release factor 1 [Mycoplasma mobile 163K]
          Length = 358

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 149/361 (41%), Positives = 228/361 (63%), Gaps = 9/361 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M    +K +  +K ++   E ++      +    Y K+++E  +IS I+   + +   +Q
Sbjct: 1   MEDTLYKSLKSIKEKYDSNEKKLLLPEVFNNIKEYTKISKENNSISEIVENFNKFLINEQ 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +D   ++ +   D E+   A+ E+   E E +ELE ++  L+LPKD +D+++ I+EIR
Sbjct: 61  TIKDAKILLDEK--DEEMVSFAKNEIHKSELENQELEKKLRILILPKDENDERNVIIEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
              GG EA +F GDL +MY ++A + K K+++L  ++   GG+ ++   + G   +S++K
Sbjct: 119 GAAGGDEANIFAGDLLKMYNKWADINKMKLKLLDYANASSGGFSQVTFLVEGDKAYSKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQR+P TE  GRVHTS  TV V+PE  ++ +V+I   D++IDT R+SG GGQ 
Sbjct: 179 FESGVHRVQRIPVTETQGRVHTSTTTVTVMPEVDDVAEVEINPVDLKIDTFRSSGPGGQS 238

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+P+GI+V+   EKSQ  NR  A+K+L+++LYD+E K+   E    RKL
Sbjct: 239 VNTTDSAVRITHLPSGIVVSSQDEKSQISNRESALKILKSKLYDLEIKKRNEETGKFRKL 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             GSG RSE+IRTYN+ Q RITDHRI  +   L+  ++G I++II  L    QA+ I  A
Sbjct: 299 A-GSGARSEKIRTYNYPQDRITDHRIGFSTS-LKIAMEGKINNIIEALHAEEQAEKIKEA 356

Query: 356 S 356
           +
Sbjct: 357 N 357


>gi|326511439|dbj|BAJ87733.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 517

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 163/353 (46%), Gaps = 9/353 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L    A +E +  +S   D   K  E   A++ +  K+ + +  K + ++  T++  
Sbjct: 165 LEQLLEEIASLENKSGDSTLWDDPSKAQELLVALTELKEKVKLLNDFKSQVEEADTIVQL 224

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E   I K + +  +      L     D    ++ I AG GG++A  +
Sbjct: 225 TEELDSIDTGLLEEASKIIKALNKALDNFEMTRLLSGPYDKDGAVITISAGAGGTDAQDW 284

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R 
Sbjct: 285 ADMLLRMYVRWGEKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQ 344

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS A V V+P   E  +D  IP ED+ I   RA G GGQ+VN  ++AVR+
Sbjct: 345 SPFNAKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRM 404

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTGI V  + E+SQ  N+++A++ L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 405 VHIPTGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQ 463

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           IR Y F   + + D R       +  V+ G +D  I   L       + +A+E
Sbjct: 464 IRNYVFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQY----KLSAAAE 512


>gi|261367680|ref|ZP_05980563.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
           15176]
 gi|282570473|gb|EFB76008.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
           15176]
          Length = 373

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 172/343 (50%), Gaps = 10/343 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   + R AE+E +M+     D   K     + +  + +K+  + +   + ++  T++  
Sbjct: 27  IEASEKRLAELEHQMTLPGFYDDQEKSQRVISEMGEVKNKLERFGKLSTQYEEAETLLEM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +++    ++ E      E    E     + +     D  + IL   AGTGG+EA  +
Sbjct: 87  IEEENDPSLASEGEQAVEGVEKAIDEL--QLMTMLNGEYDHNNAILTFHAGTGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY R+A    + VEVL   D D+ G K     I G   +  +K E GVHR+ R+
Sbjct: 145 AEMLYRMYTRWAEAHGYSVEVLDVLDGDEAGIKSASMMIKGANAYGMLKSEHGVHRLVRI 204

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ R  TS A++ V+PE    I ++I   DI +   R+SG+GGQH+N T SAVR+ 
Sbjct: 205 SPFDANARRQTSFASLEVMPELNDNIQIEINPADIEMQVYRSSGAGGQHINKTSSAVRLI 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+    +++SQ QNR  AM++++A+LY +  ++  ++    +  + +I  G    
Sbjct: 265 HKPTGIVTSCQTQRSQLQNREYAMEMMKAKLYQIALQQHKDKIDDIKGVQNEIAWG---H 321

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y F     + DHR N     ++ V+ G +D  I   L A
Sbjct: 322 QIRSYVFMPYTLVKDHRTNYESGNVQAVMDGDLDGFIYAYLKA 364


>gi|71276052|ref|ZP_00652333.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
 gi|71899474|ref|ZP_00681632.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|170729664|ref|YP_001775097.1| peptide chain release factor 2 [Xylella fastidiosa M12]
 gi|71163135|gb|EAO12856.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
 gi|71730787|gb|EAO32860.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|167964457|gb|ACA11467.1| peptide chain release factor RF-2 [Xylella fastidiosa M12]
          Length = 338

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 15/333 (4%)

Query: 21  LRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRD 77
             +      +      +L  E + +   ++ I+       E  +   +  +   D E+  
Sbjct: 3   RELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLA-EIEQDQEMLQ 61

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
               +V   + ++ +LE +           D  +  ++I+AG GG+EA  +   L RMY 
Sbjct: 62  AVLNDVDIYQLQVEKLEFQRM----FSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYL 117

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+A  R WK E+L  S  +  G K     + G   +  +K E+GVHR+ R    ++  R 
Sbjct: 118 RWAEGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRR 177

Query: 198 HTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           HTS  +V V PE    ID++I   D++ D  R+SG+GGQHVN T+SAVRITH+P+GI+V 
Sbjct: 178 HTSFTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVA 237

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQ 313
             +E+SQH NR RAMK+L A+LY+ E ++   E+      K  IG G    +IR Y   Q
Sbjct: 238 CQTERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWG---SQIRNYVLDQ 294

Query: 314 GRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            RI D R  +     + VL G +D+ I   L A
Sbjct: 295 SRIKDLRTGVERSDTQKVLDGDLDEFIEASLKA 327


>gi|325922147|ref|ZP_08183937.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           gardneri ATCC 19865]
 gi|325547382|gb|EGD18446.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           gardneri ATCC 19865]
          Length = 329

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 109/324 (33%), Positives = 161/324 (49%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L  E + +   +  I+       +  DL  +  +   D +       ++   
Sbjct: 3   NDSERAQALGRERSMLEKTVIGIADVLAGLADAADLLELA-ESEQDEDTAVAVLADLDKY 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           +  + +LE +           D  +  ++I+AG GG+EA  +   L RMY R+A  R WK
Sbjct: 62  QVHVEKLEFQRM----FSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  S  +  G K     I G  V+  +K E GVHR+ R    ++  R HTS  +V V
Sbjct: 118 TELMEVSGGEVAGIKSATIRIEGEFVYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFV 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE    I++DI   D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQ
Sbjct: 178 SPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQ 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           NR  AMK+L A+LY++E ++   ER A    K  IG G    +IR Y   Q RI D R  
Sbjct: 238 NRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D+ +   L A
Sbjct: 295 IERSDTQKVLDGDLDEFVEASLKA 318


>gi|283769449|ref|ZP_06342347.1| peptide chain release factor 2 [Bulleidia extructa W1219]
 gi|283103974|gb|EFC05359.1| peptide chain release factor 2 [Bulleidia extructa W1219]
          Length = 346

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 91/348 (26%), Positives = 176/348 (50%), Gaps = 6/348 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   +   K    +    M++    +   K  +     + +   +  + +  +   DL
Sbjct: 1   MATRFDLDQKKQEIQKNNDLMAQEDFWNDQKKAQKIIKENNSLKDLVDQHTKLYETTLDL 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +       S + +  +  V     +  +        +L     DD + ILEI  G GG
Sbjct: 61  --LASVTELQSSLDEDMKELVEEEYVQYDQDYALFEVRVLLSGPYDDHNAILEIHPGAGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  + G L+RMY R+A  + + ++VL     ++ G K +   +SG   +  +K E+GV
Sbjct: 119 TEAMDWAGMLYRMYTRFAERKGYHLDVLDYQPGEEAGVKSVSMRVSGNMAYGYLKAENGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +++ R HTS A+V ++PE  +  +++I  +D+ + TMR+SG+GGQH+N TD
Sbjct: 179 HRLVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIEDKDLDVITMRSSGAGGQHINKTD 238

Query: 242 SAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+TH PTG  + + S++SQ QNR   + +L+++L  ++ +    +R++  K ++ + 
Sbjct: 239 SAVRMTHKPTGITVFSQSQRSQLQNRETCLNMLKSKLLQLKIRE-QEQRASEIKGEVKAN 297

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +   +IR+Y F+    + D R    +  ++ V+ G I+  I+  L + 
Sbjct: 298 EWGSQIRSYVFAPYTMVKDLRTGYEVGNVQSVMDGDIEGFIDSYLRSQ 345


>gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 370

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 118/353 (33%), Positives = 176/353 (49%), Gaps = 10/353 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I  L++    +E   S            +    I  +  KI  + +   + +DL
Sbjct: 19  MRVSLDIDRLESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDL 78

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +     S  E       E+     ++     +    +L     D  + IL I AG GG
Sbjct: 79  KVLTEL--SLEEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGG 136

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY R+AA + +KVE L     ++ G K +   I G   +  +K E GV
Sbjct: 137 TEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGV 196

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A V VLPE   + D++I  ED+ IDT RASG+GGQHVN T+
Sbjct: 197 HRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTE 256

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRI HIPTGI+V   +E+SQH+NR  A+K+L+A+L +++ K    +    +  Q  IG
Sbjct: 257 SAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIG 316

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            G+   +IR+Y F     + DHR    +  +E V+ G ID  IN  L   + +
Sbjct: 317 WGN---QIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLKKFRNE 366


>gi|319401169|gb|EFV89384.1| peptide chain release factor 2 [Staphylococcus epidermidis FRI909]
          Length = 332

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 17/338 (5%)

Query: 23  MSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +   K  +      A+  I+S          +      ++ +   +   ++L 
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      E+  +         LL     D  + ILE+  G GG+E+  +   L RMY+RY
Sbjct: 61  EEVQQFEEQIDQ-----YELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 CEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V  
Sbjct: 176 SFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNN 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG G    +IR+Y F   
Sbjct: 236 QNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             + DHR N    K++ V+ G I   I   L     + 
Sbjct: 293 SMVKDHRTNEETGKVDAVMDGEIGPFIEAYLRKEMDRQ 330


>gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
           14931]
 gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
           14931]
          Length = 355

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 177/349 (50%), Gaps = 10/349 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    A+ E  M+     D   +  E+ AA++ +  +   +   + + ++L     
Sbjct: 9   DLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAE 68

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++ +     + E+      ++E         L     D    ILEI  G GG+EA  
Sbjct: 69  MLQAEPDPE--LKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQD 126

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    + VE  +    ++ G K +   I G   +  +  E GVHR+ R
Sbjct: 127 WGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVR 186

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS A+V V+P     I+V+I   D+R+DT RASG+GGQH+N T+SAVRI
Sbjct: 187 ISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRI 246

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRS 303
           TH+PTGI+  + +E+SQ QNR+ AM +L+++LY++E ++ A ER+     Q  IG G   
Sbjct: 247 THLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWG--- 303

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y F     + D R     + +  V+ G +D  IN  L  + A+ 
Sbjct: 304 SQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYLQWNLAQK 352


>gi|299535985|ref|ZP_07049304.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
 gi|298728590|gb|EFI69146.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
          Length = 328

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 109/332 (32%), Positives = 166/332 (50%), Gaps = 16/332 (4%)

Query: 22  RMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M E    D              +  I+++     +  +       ++       E  + 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKDLVETHENLDMTLELLR-----EEPDEE 55

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q E+     E ++   +    LL     D  + ILE+  G GG+E+  +   L RMY R
Sbjct: 56  LQEELGKELAEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A  R +KVE +     D+ G K +  +I G   F  ++ E GVHR+ R+   ++SGR H
Sbjct: 116 WAEKRGFKVETVDYLPGDEAGIKSVTLSIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS  +  V+PE  +  ++DI  ED++IDT RA+G+GGQH+NTTDSAVRITHIPTG +V  
Sbjct: 176 TSFVSCDVMPEFDDNIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTIVQC 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR +AM +L+ +LY +E  +   +    R  Q  IG G    +IR+Y F   
Sbjct: 236 QAERSQIKNREKAMTMLKGKLYQLELDKQQAQLDEIRGEQKEIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             + DHR N     +  V+ G +D  IN  L 
Sbjct: 293 SMVKDHRTNEETGNVGAVMDGDLDPFINAYLR 324


>gi|257870245|ref|ZP_05649898.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
 gi|257804409|gb|EEV33231.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
          Length = 329

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 100/326 (30%), Positives = 170/326 (52%), Gaps = 6/326 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    D   +  +     +        ++Q  +E ++L  ++     + +    A++ 
Sbjct: 1   MADPTFWDDSEQAQKVINENNANKETYDQFNQLAEEFEELEVLLEMIQEEPDAEMEAELA 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                   +         +L  +  D  + I+E+  G GG+E+  +   L RMY R+   
Sbjct: 61  ERIQALNEKM--GTYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++VE L     D+ G K +   I G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 119 HGYQVETLDYQAGDEAGIKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFC 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    ID++I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +++
Sbjct: 179 SVDVMPELDGAIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ +NR +AM +L+A+LY +E ++   E +A R  Q+  G    +IR+Y F     + DH
Sbjct: 239 SQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQMEIG-WGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLT 345
           R N     ++ V+ G +D  I+  L 
Sbjct: 298 RTNFETGNVQAVMDGDLDGFIDAYLK 323


>gi|15837713|ref|NP_298401.1| peptide chain release factor 2 [Xylella fastidiosa 9a5c]
 gi|9106068|gb|AAF83921.1|AE003947_1 peptide chain release factor 2 [Xylella fastidiosa 9a5c]
          Length = 338

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 15/333 (4%)

Query: 21  LRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRD 77
             +      +      +L  E + +   ++ I+       E  +   +  +   D E+  
Sbjct: 3   RELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLA-EIEQDQEMLQ 61

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
               +V   + ++ +LE +           D  +  ++I+AG GG+EA  +   L RMY 
Sbjct: 62  AVLNDVDIYQLQVEKLEFQRM----FSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYL 117

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+A  R WK E+L  S  +  G K     + G   +  +K E+GVHR+ R    ++  R 
Sbjct: 118 RWAEGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRR 177

Query: 198 HTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           HTS  +V V PE    ID++I   D++ D  R+SG+GGQHVN T+SAVRITH+P+GI+V 
Sbjct: 178 HTSFTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVA 237

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQ 313
             +E+SQH NR RAMK+L A+LY+ E ++   E+      K  IG G    +IR Y   Q
Sbjct: 238 CQTERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWG---SQIRNYVLDQ 294

Query: 314 GRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            RI D R  +     + VL G +D+ I   L A
Sbjct: 295 SRIKDLRTGVERSDTQKVLDGDLDEFIEASLRA 327


>gi|269794320|ref|YP_003313775.1| peptide chain release factor 1 [Sanguibacter keddieii DSM 10542]
 gi|269096505|gb|ACZ20941.1| bacterial peptide chain release factor 1 (bRF-1) [Sanguibacter
           keddieii DSM 10542]
          Length = 361

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 137/347 (39%), Positives = 199/347 (57%), Gaps = 19/347 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L    AEIE ++++        +   L   YA +  +++    +     +        
Sbjct: 9   EPLLAEHAEIEQQLADPAVHADAARARTLGRRYAELGQVVAAYRGWRSAVDDA------- 61

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                 +        E+ A++    +   ++  +L+P+D DD +  ILEI+AG GG E+A
Sbjct: 62  EAAAELAAEEPAFAEELPALQTAATDAAEKLRRVLIPRDPDDGRDVILEIKAGEGGEESA 121

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKFE 179
           LF GDL RMY RYA  R WK EV+ ++++D GGYK++   +          G ++ +K+E
Sbjct: 122 LFAGDLLRMYLRYAERRGWKTEVIEATESDLGGYKDVQVAVKAKGTVAPEDGPWANLKYE 181

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVN 238
            GVHRVQRVP TE+ GR+HTSAA V V PE  +    +I   D+RID  R+SG GGQ VN
Sbjct: 182 GGVHRVQRVPVTESQGRIHTSAAGVLVFPEVEDAGELEIDQNDLRIDVYRSSGPGGQSVN 241

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH+PTGI+V+  +EKSQ QNR +AM+VLRARL    ++  A   +  R+ Q+
Sbjct: 242 TTDSAVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEEAAAANDIRRSQV 301

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            + DRSERIRTYN+ + RI DHR     Y L+ VL G ++ ++   +
Sbjct: 302 RTVDRSERIRTYNYPENRIADHRTGYKSYNLDQVLDGDLEPVVRSAI 348


>gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 330

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 17/333 (5%)

Query: 23  MSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+E    D   K  +      A+  I++       +  +      ++ +        DL 
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+RY
Sbjct: 61  QEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 CEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V  
Sbjct: 176 SFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNN 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F   
Sbjct: 236 QNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + DHR N    K++ V+ G I   I   L  
Sbjct: 293 SMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 325


>gi|118467007|ref|YP_883159.1| peptide chain release factor 2 [Mycobacterium avium 104]
 gi|166225107|sp|A0QJS1|RF2_MYCA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118168294|gb|ABK69191.1| peptide chain release factor 2 [Mycobacterium avium 104]
          Length = 370

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 163/346 (47%), Gaps = 5/346 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R  ++E   S+    D   +     + +S    ++   ++ +    DL  +  
Sbjct: 24  DVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEELRARLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + E    A  E  A  K +R          L     D++  ++ IR+G GG +AA 
Sbjct: 84  LAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAAD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 144 WAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 204 ISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVRL 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K + GS     +
Sbjct: 264 THIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDAL-KGEGGS-SWGNQ 321

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 322 MRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWRNRK 367


>gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
 gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
          Length = 330

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 167/329 (50%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQ 80
           M E    D   +  +    ++ I   +  Y +   +  D   ++      +D+ +    Q
Sbjct: 1   MGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQ 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
            E   I+  +RELE      +L     D  + IL + AG GG+EA  +   L RMY R+A
Sbjct: 61  TEFETIKTAVRELEL----EVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               + V        D+ G K     I+G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 ERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTS 176

Query: 201 AATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            +   ++PE  + ++V I + D+R+DT RASG+GGQH+N T SAVR+TH+PTGI+V   +
Sbjct: 177 FSACDIMPEIDDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQN 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           E+SQ QNR + MK+LRA+L+++E+++   E       Q    +   +IR+Y F     + 
Sbjct: 237 ERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQK-IEWGSQIRSYVFQPYTMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R  +    ++ V+ G +D  I   L A
Sbjct: 296 DMRTGMETGNVQAVMDGDLDAFIEAFLAA 324


>gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
 gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
 gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
 gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
          Length = 325

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 179/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+  +       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LTELDMMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
 gi|56679167|gb|AAV95833.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
          Length = 375

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 119/336 (35%), Positives = 170/336 (50%), Gaps = 5/336 (1%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           ++R  E   R+ +    D      +       ++  + IY   + +  D   +I     +
Sbjct: 29  QHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGIETDLADNIELIELGEME 88

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            +   +   E        R  E E+  L       D     LEI AG GG+E+  +   L
Sbjct: 89  DDQDVIKDAEAALKALRERAAEKELEAL--LDGEADGNDTFLEINAGAGGTESCDWASML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  + +KVE+ S S  D+ G K     ISG   +  +K ESGVHR+ R+   +
Sbjct: 147 ARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYD 206

Query: 193 ASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           A+ + HTS ++V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITHIPT
Sbjct: 207 AAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHIPT 266

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSSEKSQHQNR  AMK L++RLY  E  R   E +A  + + G      +IR+Y  
Sbjct: 267 GIVVTSSEKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEAK-GDAGWGNQIRSYVL 325

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + + D R        + VL G +D  +   L  
Sbjct: 326 QPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLAM 361


>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
 gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
          Length = 353

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 167/343 (48%), Gaps = 10/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  ++   AE E  M +    D   K      A + +      ++    E ++L  +  
Sbjct: 9   DLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEYEELTLLNE 68

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +     ++       + +   +     +L     D    +LEI  G GG+E+  
Sbjct: 69  MVKEEPDPDLSKELVNRIQAFQAKI--SAYERNILLSGEYDHNDALLEIHPGAGGTESQD 126

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY+R+A    ++V  L   + D+ G K +   I G   +  +K E G+HR+ R
Sbjct: 127 WASMLLRMYQRWADQHDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFLKSEDGIHRLVR 186

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS A+V ++P      +++I   DI +D  RASG+GGQH+N T SAVR+
Sbjct: 187 ISPFDSNKRRHTSFASVEIMPVLDQNTEIEIDESDIEMDVFRASGAGGQHINKTSSAVRL 246

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           TH+PTGI+V +  ++SQ QNR  AMK+L+A+L  +  ++ A E    R  K +I  G   
Sbjct: 247 THVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEKSEIAWG--- 303

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y F     + DHR +     ++ V+ G +D  I+  L 
Sbjct: 304 SQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYLK 346


>gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B]
 gi|166223620|sp|A0LVP4|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus
           cellulolyticus 11B]
          Length = 369

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 101/340 (29%), Positives = 167/340 (49%), Gaps = 11/340 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   A++E + ++    +         + +S + ++I   +  ++   D+  +  
Sbjct: 25  DLPAMRREAADLERQAADPGLWNDPENAQRVTSRLSFLQAEIRRVEGLRKRLDDVMVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  +D   R  A  E+ A++K I +LE       L     D +  ++ I +  GG +A
Sbjct: 85  LAEAENDEPTRTEALAEMAALQKAIDDLEV----RTLLSGEYDAREALVTINSQAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A +   L RMY R+A    +  E+L +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADWAQMLLRMYLRWAERHGYPTEILDTSYAEEAGIKSATFIVHAPFTYGLLAAEHGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +   R  TS A V V+P       +DIP ++IR+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQARRQTSFAGVDVVPVVEKTDHIDIPEDEIRVDVFRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V   +E+SQ QNR  AM VL+ARL +  R+  A + +A R     +    
Sbjct: 261 RITHLPTGIVVTCQNERSQLQNRATAMMVLQARLLERRRQEEAAKLAALRGE--TTTSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
            +IR Y     + + D R  +       VL G ID+ I+ 
Sbjct: 319 TQIRNYVLHPYQLVKDLRTEVETSNTAGVLDGEIDEFIDA 358


>gi|315604645|ref|ZP_07879708.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313657|gb|EFU61711.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 364

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 133/347 (38%), Positives = 196/347 (56%), Gaps = 19/347 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  L   + ++E +M++  ++       ++   YA +  + +          + Q    +
Sbjct: 10  LEPLLAEYEQVEAQMADPRTLADPQLMRRVGRRYAELGRVKAAADRLSAAAGDLQAAREL 69

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +  S ++     + E  A  + + ++       L P+D +D    ILEI+AG GG E+
Sbjct: 70  AVEDRSFADEIPALEEEEAAAHEALVKI-------LAPRDPEDAMDVILEIKAGEGGEES 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFSRMKF 178
           ALF  DL RMY RYA    W V  LS++  + GG+K++   I          GV++ +K+
Sbjct: 123 ALFASDLARMYGRYAEAHGWSVTELSATHTELGGFKDVTLAIRAKGTPAPDEGVWAHLKY 182

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHV 237
           E GVHRVQRVP TE+ GR+HTSA  V V+PE  + D  +    D+RID  R+SG GGQ V
Sbjct: 183 EGGVHRVQRVPITESQGRIHTSAVGVFVMPEIEDDDEIVIDPADLRIDVYRSSGPGGQSV 242

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRITH+P+GI+V+  +EKSQ QN+  A++VL +RL    R +   E SA R  Q
Sbjct: 243 NTTDSAVRITHLPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKREAEASAQRLSQ 302

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPL 343
           + + DRSERIRTYNF + RI DHR     + L+ VL G +D +I+ L
Sbjct: 303 VRTVDRSERIRTYNFPENRIADHRTGFKAHNLDAVLSGALDAVISSL 349


>gi|73748409|ref|YP_307648.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
 gi|73660125|emb|CAI82732.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
          Length = 356

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 172/343 (50%), Gaps = 8/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +    E+E   S            +    ++       ++   ++   DL  +  
Sbjct: 15  DVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELAV 74

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  + +  + E+  +  E+  LE      L      D+++ +L + AG GG E+  
Sbjct: 75  LSREDPSLSNEIEHEISGLTAELDSLEVG----LAFSGQYDNRNALLTVHAGAGGVESQD 130

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L RM+ R+A  + + +E+L  S  ++ G K     I G   +  +K E GVHR+ R
Sbjct: 131 WAGMLLRMFMRWAEKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIR 190

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A    HTS A V ++PEA +  D+DI  EDI+ID  R+SG GGQ+V    +AVR+
Sbjct: 191 LSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRV 250

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIP+GI+V + +E+SQHQNR  AM++L ++L  VE  + A ER+  +  +I S +   +
Sbjct: 251 THIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERI-SAEWGSQ 309

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y       + DHR +  +   E VL+G +D  I+  L  +
Sbjct: 310 IRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQN 352


>gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
 gi|156869337|gb|EDO62709.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
          Length = 374

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 178/344 (51%), Gaps = 10/344 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  +K    E+E   +     D   K  +     S + +K+S Y+      +D  T+I  
Sbjct: 27  LEAMKKEIGELEEAQTSPDFWDDMEKSQKIIQRTSMLKNKVSAYETLVSGYEDALTLIEM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + + ++  L   +    +      E  +  L       D  + IL   AG GG+EA  +
Sbjct: 87  GDEEEDLSILPDAQQEVEKVRKELEEQRLATL--LTGEYDANNAILTFHAGAGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY R+     +KV+ L   D ++ G K  V  I G   +  +K E+GVHR+ RV
Sbjct: 145 AEMLYRMYCRWGERHNFKVKTLDYLDGEEAGLKSAVVLIEGLNAYGYLKSEAGVHRLVRV 204

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +ASGR HTS A++ V+PE  E  +V+I  EDI++D  RASG+GGQ VN T SAVR+T
Sbjct: 205 SPFDASGRRHTSFASLEVMPEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKTSSAVRLT 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           HIPTGI+V    E+SQHQNR  AMK+L ++L +++ +   ++ S  + +Q  IG G    
Sbjct: 265 HIPTGIVVSCQVERSQHQNREVAMKMLASKLMEIKEREHLDKISDIKGVQKEIGWG---S 321

Query: 305 RIRTYNFSQGRI-TDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F    +  DHR N  +  +  V+ G ID  IN  L   
Sbjct: 322 QIRSYVFMPYTLAKDHRTNYEMGNINAVMDGDIDGFINAYLKQE 365


>gi|323489912|ref|ZP_08095134.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
 gi|323396419|gb|EGA89243.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
          Length = 327

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 108/332 (32%), Positives = 169/332 (50%), Gaps = 10/332 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M +    +         + ++ +   ++ Y    + ++++   +     + +      ++
Sbjct: 1   MLDPDFWNNQETAQTVISELNGLKEVVNAYYSFMETQENMEMSLELLREEDDEDLHEDVD 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               +        +    +L  +  D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 61  KDMKQFISDL--ADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE   EI++DI  ED++IDT RASG+GGQH+NTTDSAVRITH PTG +V    E+
Sbjct: 179 SCEVMPEFTGEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHAPTGAVVTCQQER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR +AM++L+A+LY ++ +         R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           DHR N     L  V+ G ID  IN LL +   
Sbjct: 296 DHRTNFETGNLGAVMDGDIDGFINSLLRSKME 327


>gi|73663271|ref|YP_302052.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495786|dbj|BAE19107.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 334

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 102/338 (30%), Positives = 171/338 (50%), Gaps = 17/338 (5%)

Query: 23  MSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    D   K  +      A+  +++     + + ++      ++ + + ++  +DL 
Sbjct: 1   MTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q       +  +         LL     D  + I+E+  G GG+E+  +   L RMY+RY
Sbjct: 61  QSVQDFKNELDQ-----FELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + + VE+      D+ G K +   + G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 CEQKGFNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A+  V+P+      ++DI  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V  
Sbjct: 176 SFASCDVIPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNN 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR  AMK L+++LY ++ +    E +  R  Q  IG G    +IR+Y F   
Sbjct: 236 QNERSQIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGEQKEIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             + DHR N    K++ V+ G I   I   L +   + 
Sbjct: 293 AMVKDHRTNEETGKVDAVMDGDIGPFIEAFLRSQMDQH 330


>gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
 gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
 gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
 gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
 gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
 gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
 gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
 gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
 gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
 gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
 gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           H19]
 gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
 gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
 gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
 gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
 gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
 gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
 gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
 gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
 gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
 gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
 gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           H19]
 gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11]
 gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21189]
 gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21193]
          Length = 331

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 108/334 (32%), Positives = 168/334 (50%), Gaps = 17/334 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I++       +  +      ++ +   +    DL
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+R
Sbjct: 61  EQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V 
Sbjct: 176 TSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + DHR N    K++ V+ G I   I   L  
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 326


>gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
 gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
          Length = 372

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 105/350 (30%), Positives = 177/350 (50%), Gaps = 11/350 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    AE E +MS+    D      +     + + ++   +   ++  +DL  +  
Sbjct: 25  DLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSLQKSVEDLTAMAE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + + +  D+       IEK  ++LE      LL +  D   + ILEI  G GG+E+  
Sbjct: 85  LLSEEDD-ADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS-NNAILEIHPGEGGTESTD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L+RMY R+A    +KVEV      D  G       I G   +  ++ E GVHR  R
Sbjct: 143 WASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLRSEKGVHRFVR 202

Query: 188 VPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   +++GR HTS  ++ V+P  +  EI+++I  +D+++D  R+ G+GGQ+VN   +AVR
Sbjct: 203 ISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQNVNKVSTAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           +THIPTGI+V +  E++Q+ NR  AMK+L+A+LY+ E ++   E +     KL +  G  
Sbjct: 263 LTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSGTKLDVAWG-- 320

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y F   R + D R        + V+ G +D  IN  L    ++ 
Sbjct: 321 -SQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWKLSQK 369


>gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1]
 gi|122277196|sp|Q04GC3|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni
           PSU-1]
          Length = 372

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 105/350 (30%), Positives = 177/350 (50%), Gaps = 11/350 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    AE E +MS+    D      +     + + ++   +   ++  +DL  +  
Sbjct: 25  DLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSLQKSVEDLTAMAE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + + +  D+       IEK  ++LE      LL +  D   + ILEI  G GG+E+  
Sbjct: 85  LLSEEDD-ADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS-NNAILEIHPGEGGTESTD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L+RMY R+A    +KVEV      D  G       I G   +  ++ E GVHR  R
Sbjct: 143 WASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLRSEKGVHRFVR 202

Query: 188 VPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   +++GR HTS  ++ V+P  +  EI+++I  +D+++D  R+ G+GGQ+VN   +AVR
Sbjct: 203 ISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQNVNKVSTAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           +THIPTGI+V +  E++Q+ NR  AMK+L+A+LY+ E ++   E +     KL +  G  
Sbjct: 263 LTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSGTKLDVAWG-- 320

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y F   R + D R        + V+ G +D  IN  L    ++ 
Sbjct: 321 -SQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWKLSQK 369


>gi|294102045|ref|YP_003553903.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
           12261]
 gi|293617025|gb|ADE57179.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
           12261]
          Length = 368

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 103/348 (29%), Positives = 173/348 (49%), Gaps = 15/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            +  L+ +  E+E +  +      D   K+T+E A     +       +  ++ + +  +
Sbjct: 25  DLPILEIKIQELEEKTLKPDFWGSDEARKVTQELARYQDKLDSWKKIAEDYEDLEIIEEM 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +       +D  Q      ++           + L  +  D  + I+ + AG+GG ++
Sbjct: 85  LKEEEDRELQKDFEQKAFSLKKEI-----ERQQLIELLSEDYDQGNAIVSVHAGSGGLDS 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L+RMY R+     ++V+VL    + +GG   +   + G   +  +K E GVHR+
Sbjct: 140 QDWAEMLYRMYARWMEQNDFRVKVLDLIKDSEGGISNVTLLVEGSYAYGYLKSEKGVHRL 199

Query: 186 QRVPATEASGRVHTSAATVA-VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++GR HTS A+V  V     + D++I  ED+RIDT R+SG+GGQHVN TDSAV
Sbjct: 200 VRISPFDSAGRRHTSFASVDIVPELPEDEDIEIRTEDLRIDTYRSSGAGGQHVNMTDSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGD 301
           RITH P+GI+V   +E+SQH N+  AM+VL+++LY+   +   NE       K +I  G 
Sbjct: 260 RITHFPSGIVVSCQNERSQHMNKAVAMQVLKSKLYERAIEERRNEMDTIIGEKKEISWG- 318

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
              +IR+Y       + DHR       ++ VL G IDD I   L   +
Sbjct: 319 --SQIRSYVLHPYTLVKDHRTGEETGNVQAVLDGDIDDFIMAYLRWKK 364


>gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018]
 gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
 gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
          Length = 380

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK   A++E + SE    D      +  + +S   S++      +Q  +D  T+I 
Sbjct: 25  DVNSLKTAIADLEKQASEPGLWDDSDHAQQVTSKLSAAQSQLKRLQAVEQRIEDTKTLIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   +++ +            +++    L     D ++ ++ IR+G GG +AA 
Sbjct: 85  LGQEEEDADSMSEAQEELGSIAHEL--DDMEVQTLLDGEYDARAAVVTIRSGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K +++ +S  ++ G K     +     + R+  E G HR+ R
Sbjct: 143 FAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  T  + V V+P   A   +DIP  DIR+DT +ASG GGQ VNTT SAVRI
Sbjct: 203 ISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRI 262

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRS 303
           TH+PTG++V+   E+SQ QNR  AM VL++RL  ++      E +A +K   G       
Sbjct: 263 THLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK----HAEEAAKKKELAGDIKASWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G ID  I   +     + + +  E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAAKKE 373


>gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R]
 gi|24638152|sp|Q8NS78|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|166223627|sp|A4QCD3|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC
           13032]
 gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 368

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 171/344 (49%), Gaps = 9/344 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++ +R  E+E + ++    D      +  + +S + +++      +Q  +DL  ++   
Sbjct: 26  QEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITDLRQRIEDLPIMVELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             +    D           ++R L + +    +     D +  ++ IR+G GG +AA + 
Sbjct: 86  EEE----DGDTSIAEEELADLRSLIDALEVKTMLSGEYDAREAVINIRSGAGGVDAADWA 141

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     KV++   S  ++ G K     + G  ++ ++  E G HR+ R+ 
Sbjct: 142 EMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRIS 201

Query: 190 ATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP   +   +DIP  D+R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 202 PFDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLTH 261

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++R
Sbjct: 262 IPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDAL--GAGGNASWGNQMR 319

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y     + + D R N  +   + VL G ID ++   +    A+
Sbjct: 320 SYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWRMAE 363


>gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
 gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
          Length = 453

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 95/351 (27%), Positives = 165/351 (47%), Gaps = 5/351 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+   A +E + +++   D   K  E  +A++ +  ++ +  + K   +D  T++  
Sbjct: 101 LEQLEQEIANLESKATDTSFWDDRTKAQETLSALNDLKDRMRLLSEFKTMVEDAETIVKL 160

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                        E + I KE+ +  +      L     D +  ++ I AG GG++A  +
Sbjct: 161 TEEMDSTDVSLLEEAMGIIKELNKSLDRFELTQLLSGPYDKEGAVVYITAGAGGTDAQDW 220

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K +V+  S+ ++ G K     I GR  +  +  E G HR+ R 
Sbjct: 221 ADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQ 280

Query: 189 PATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               + G   TS + V V+P      + ++IP ED+ I   RA G GGQ+VN  ++AVRI
Sbjct: 281 SPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRI 340

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG+ V  + E+SQ  N+ RA+  L+A+L  +  ++ A E    R   +   +  ++
Sbjct: 341 THIPTGVAVRCTEERSQLANKTRALIRLKAKLLVIAEEQRATEIKEIRGDAVK-AEWGQQ 399

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           IR Y F   + + D R       +  V+ G +D  I   L       + SA
Sbjct: 400 IRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHKYTLAMASA 450


>gi|330719765|gb|EGG98281.1| Peptide chain release factor [gamma proteobacterium IMCC2047]
          Length = 365

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 171/329 (51%), Gaps = 15/329 (4%)

Query: 25  ESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           +S   D       L +E + +  I++ I   D    +  +L  +  + + +  + +++  
Sbjct: 43  DSAVWDEPERAQALGKERSQLENIVATIDRLDSGISDGHELLAMAIEEDDEDTVNEVSAE 102

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
                 +  +     + +  +     D+ S  L+I+AG+GG+EA  +   L RMY R+  
Sbjct: 103 IETLDAQLAK-----LEFRRMFSGEMDENSAFLDIQAGSGGTEAQDWAEMLLRMYLRWGE 157

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            + +KVE++  S  D  G K       G   F  ++ E+GVHR+ R    ++  R HTS 
Sbjct: 158 QKGFKVELMEVSAGDVAGIKGATIKFEGEYAFGWLRTETGVHRLVRKSPFDSGSRRHTSF 217

Query: 202 ATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           + V V PE  +  ++DI   D+RIDT RASG+GGQHVN TDSAVRITH PT ++V   S+
Sbjct: 218 SAVFVSPEIDDNVEIDINPADLRIDTYRASGAGGQHVNKTDSAVRITHEPTNVVVQCQSQ 277

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRIT 317
           +SQHQN+  AMK LRA+LY++E ++  +  +   + K  IG G    +IR+Y     RI 
Sbjct: 278 RSQHQNKDFAMKQLRAKLYELEMQKRNDAAQAQEDNKADIGWG---SQIRSYVLDSSRIK 334

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R N+     + VL G +D  I   L A
Sbjct: 335 DLRTNVETSNTQAVLDGGLDMFIEASLKA 363


>gi|152971837|ref|YP_001336946.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896431|ref|YP_002921169.1| peptide chain release factor 2 [Klebsiella pneumoniae NTUH-K2044]
 gi|262042532|ref|ZP_06015689.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330010996|ref|ZP_08306940.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
 gi|150956686|gb|ABR78716.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238548751|dbj|BAH65102.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259040092|gb|EEW41206.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328534333|gb|EGF60944.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
          Length = 320

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 104/324 (32%), Positives = 172/324 (53%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E +++  I+  +    Q  ++   L  +  + + +    +       A 
Sbjct: 3   NEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLDLAVEADDEETFNEAV-----AE 57

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
              + E   ++ +  +     D   C L+I+AG+GG+EA  +   L RMY R+A  R +K
Sbjct: 58  LDTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  S+ +  G K +   I G   +  ++ E+GVHR+ R    ++ GR HTS ++  V
Sbjct: 118 TEIIEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFV 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE   +ID++I   D+RID  RASG+GGQHVN T+SAVRITHIPTG++    +++SQH+
Sbjct: 178 YPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHK 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AMK ++A+LY++E ++   E+    + K  IG G    +IR+Y     RI D R  
Sbjct: 238 NKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D  I   L A
Sbjct: 295 VETRNTQAVLDGSLDQFIEASLKA 318


>gi|314933063|ref|ZP_07840429.1| peptide chain release factor 2 [Staphylococcus caprae C87]
 gi|313654382|gb|EFS18138.1| peptide chain release factor 2 [Staphylococcus caprae C87]
          Length = 333

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 164/339 (48%), Gaps = 17/339 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M++    +   K  E      A+  I++       +  +      ++ +   +    +L
Sbjct: 1   MMADPDFWNDQSKAQEIIDKNNALKSIVNGYRDLANEVDDMSATRELLQEEYDEDMKEEL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
                 +   + ++  ++    LL     D  + I E+  G GG+E+  +   L RMY+R
Sbjct: 61  E-----SDVIQFKDKMDQFELQLLLDGPHDANNAIFELHPGAGGTESQDWASMLLRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y     + VE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEQNGFNVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V 
Sbjct: 176 TSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY  +      E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQQKLDEQEREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
              + DHR N    K++ V+ G I   I   L       
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIGPFIEAYLRKEMDNQ 331


>gi|299472049|emb|CBN80132.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 466

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 108/357 (30%), Positives = 180/357 (50%), Gaps = 8/357 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           ++  S   I  L+ R AE++  +S+    D   K  +     + + SK+        E Q
Sbjct: 105 LLLSSRLDIPALEARLAELDALVSDPKLYDDSTKAGKIVKERAKVESKLENVKSLNSELQ 164

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +    + + E   L +          +        LL         +C LE++AG 
Sbjct: 165 SWREMYEMASLEEEGDLLTECIEKVGALRKQAERARAETLLSLGGELSASNCYLELQAGA 224

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+E+  +   L++MY R+A  + + ++ L+SS  D+ G + ++  + G   +  ++ E+
Sbjct: 225 GGTESHDWTSMLYKMYTRWAETKAFTLQPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEA 284

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-----IPLEDIRIDTMRASGSGGQ 235
           GVHR+ R    + +GR HTS + V V PEA     D     IP +D+++DTMRA G+GGQ
Sbjct: 285 GVHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQ 344

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTTDSAVR+TH+PTG++  + S++SQH+NR  AM+ LRA+++  + +    +R+    
Sbjct: 345 HVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQRKEEERHAKRNEYAA 404

Query: 295 LQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              G      +IR+Y  S  + + DHR       +  VL G +D  I+  L A  +K
Sbjct: 405 GL-GDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSK 460


>gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
 gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
          Length = 370

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 99/351 (28%), Positives = 160/351 (45%), Gaps = 10/351 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L  +  E+E +  +    D      +  +A+S   +KI   +  +    D+  +    
Sbjct: 26  AALAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLESLRSRVDDMPVMFELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             + +                      +    +     D +  ++ IR+G GG +AA + 
Sbjct: 86  EEEGDTALADDELEDLGAAIEA-----LEVTTMLSGEYDPREAVINIRSGAGGVDAADWA 140

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     KV+V   S  ++ G K     + G  ++ ++  E G HR+ R+ 
Sbjct: 141 EMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRIS 200

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       +D+P  D+R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 201 PFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDGDVRVDVYRSSGPGGQSVNTTDSAVRLTH 260

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++R
Sbjct: 261 IPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL--GAGGNASWGNQMR 318

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +Y     + + D R N  +     VL G +D  +   +    A+   +  E
Sbjct: 319 SYVLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFLEAGIRWRMAEAQKAEKE 369


>gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
 gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
 gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
 gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
 gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|301799772|emb|CBW32341.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141]
 gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545]
 gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368]
          Length = 325

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 102/330 (30%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M899]
 gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M1015]
 gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M899]
 gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M809]
 gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 331

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 17/334 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I++       +  +      ++ +        DL
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+R
Sbjct: 61  EQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V 
Sbjct: 176 TSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + DHR N    K++ V+ G I   I   L  
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 326


>gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
 gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
          Length = 325

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 102/330 (30%), Positives = 182/330 (55%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  LTELDKMMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 372

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 120/353 (33%), Positives = 178/353 (50%), Gaps = 10/353 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I  L++    +E   S+                I  I  KI  + +   + +DL
Sbjct: 21  MGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERFQKLYSQWEDL 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      +       ++E   I  E +  E +I  L       D  + IL I AG GG
Sbjct: 81  KVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEIL--LNGPYDKNNAILSIHAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY R+AA + +KVE L     ++ G K +   I G   +  +K E GV
Sbjct: 139 TEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A V VLPE   + D++I  ED+ IDT R+SG+GGQHVN T+
Sbjct: 199 HRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHVNKTE 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRI HIPTGI+V   +E+SQH+NR  A+K+L+A+L +++ K    +    +  Q  IG
Sbjct: 259 SAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIG 318

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            G+   +IR+Y F     + DHR    +  +E V+ G ID  IN  L   + +
Sbjct: 319 WGN---QIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLKKFRNE 368


>gi|192291110|ref|YP_001991715.1| hypothetical protein Rpal_2731 [Rhodopseudomonas palustris TIE-1]
 gi|192284859|gb|ACF01240.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 376

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 10/338 (2%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R AE+     +    +   K  +     + +   ++   + ++E  D   +I     ++E
Sbjct: 31  RLAELNKLAEDPDLWNDPQKAQKLMQERTSLEDSLTGIGKVERELTDNIEMIEL--GEAE 88

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             +    E     K +++         L     D     LE+ AG GG+E+  +   L R
Sbjct: 89  GDEGIVKEAEDALKALKKEVARRELEALLSGEADRFDTYLEVHAGAGGTESQDWASMLLR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A    +K+E L  S+ ++ G K     ISG   +  +K E+GVHR+ R+   +++
Sbjct: 149 MYVRWAEKHGFKIEYLEESEGEEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPFDSN 208

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS ++V + P       +DI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTG+
Sbjct: 209 ARRHTSFSSVQIFPVIDNSIKIDIAESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGV 268

Query: 254 -MVTSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYN 310
            +V  + +SQH+NR +A  +LRARLY++E K+           K +IG G    +IR+Y 
Sbjct: 269 AVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQAAKTEIGWG---HQIRSYV 325

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               + + D R  +       VL G +D+ +   L   
Sbjct: 326 LQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363


>gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
 gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
          Length = 333

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 111/330 (33%), Positives = 177/330 (53%), Gaps = 10/330 (3%)

Query: 22  RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLA 79
            + E    D   +  +    ++ +  K+  Y   + + +DL  +  +G   +D+EI    
Sbjct: 1   MIQEPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAEENDAEILAEI 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +  +  I  E+       +  LL     D  + +L + AG GG+EA  +   L RMY R+
Sbjct: 61  EAGIQTITAELD----RWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRW 116

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              R +KVE+L S   D+ G K    ++ G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 117 GEKRGYKVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHT 176

Query: 200 SAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE ++  ++ I  ED+++DT RA G+GGQHVN T+SAVRITHIPTGI+V   
Sbjct: 177 SFASLEVLPEVSDGAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQ 236

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           SE+SQ QNR  AM++L+A+L++ +R+    E +   K          +IR+Y F     +
Sbjct: 237 SERSQIQNRATAMRMLQAKLFERQRQEQEAEVNRL-KGDQQDIAFGSQIRSYVFHPYNLV 295

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N  +  +  V+ G +D+ I+  L  
Sbjct: 296 KDHRTNTEVGNVHAVMDGELDEFISAYLVW 325


>gi|262049538|ref|ZP_06022408.1| peptide chain release factor 2 [Staphylococcus aureus D30]
 gi|259162374|gb|EEW46946.1| peptide chain release factor 2 [Staphylococcus aureus D30]
          Length = 330

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 107/333 (32%), Positives = 167/333 (50%), Gaps = 17/333 (5%)

Query: 23  MSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+E    D   K  +      A+  I++       +  +      ++ +   +     L 
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEYLE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+RY
Sbjct: 61  QEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 CEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V  
Sbjct: 176 SFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNN 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F   
Sbjct: 236 QNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + DHR N    K++ V+ G I   I   L  
Sbjct: 293 SMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 325


>gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St.
           Maries]
 gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St.
           Maries]
          Length = 338

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 20/346 (5%)

Query: 17  AEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E++ R S +   D      KL  E A +  +++     +++  E  +L  +  + +S+ 
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDLADESDSE- 60

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
                    + +   ++    ++     +     D   C L IR G GG+E+  +   L 
Sbjct: 61  -----FLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLL 115

Query: 134 RMYERYA-ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
           RMY R+A     +  E++   D +  G K +   ISG G +   K ESGVHR+ R+   +
Sbjct: 116 RMYVRWAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFD 175

Query: 193 ASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +S R HTS A+V V P    +ID++I  +D+RIDT RASG+GGQHVN T+SAVRITH+P+
Sbjct: 176 SSSRRHTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPS 235

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRT 308
           GI+V   + +SQHQNR  A  +LR+RLY++E +    + +   + +  IG G    +IR+
Sbjct: 236 GIVVQCQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWG---HQIRS 292

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH--QAKM 351
           Y     R + D R       ++ VL G +D  I   LT    QA+ 
Sbjct: 293 YVMHPYRMVKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLSQAQK 338


>gi|77164311|ref|YP_342836.1| peptide chain release factor 2 [Nitrosococcus oceani ATCC 19707]
 gi|254433270|ref|ZP_05046778.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
 gi|76882625|gb|ABA57306.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosococcus
           oceani ATCC 19707]
 gi|207089603|gb|EDZ66874.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
          Length = 331

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 15/335 (4%)

Query: 18  EIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           E++  ++     D      +L +E A +  +++ ++    +  + ++L  +  +   +  
Sbjct: 2   EVDRELAVPSVWDEPERAQQLGQERAQLQSVVAPLAELGGEIIQVRELFELAMEEGDEDT 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
            +++     +A    + +   ++ +  +     D  +  L+I+AG+GG+EA  +   L R
Sbjct: 62  AQEI-----IAELDVVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWANMLLR 116

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+     +K E+   S+ +  G K       G   F  ++ E+GVHR+ R    ++ 
Sbjct: 117 MYLRWGEKHSFKTELTEVSEGEVAGIKSAAIRFEGEYAFGWLRTETGVHRLVRKSPFDSG 176

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS A+V V PE  E  D++I   D+RIDT RASG+GGQHVN TDSAVRITH+P+ +
Sbjct: 177 NRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPSSL 236

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSERIRTYN 310
           +V   SE+SQHQN+  AM  LRA+LY++E +    E+  +   K  IG G    +IR Y 
Sbjct: 237 VVQCQSERSQHQNKAHAMAQLRAKLYELEMRNRQAEKQAAEEAKADIGWG---SQIRNYV 293

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             Q RI D R  + +   + VL G +D  I   L 
Sbjct: 294 LDQSRIKDLRTGIEVGNTQGVLDGDLDSFIEASLK 328


>gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
 gi|226726318|sp|A6WEK6|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
          Length = 367

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 162/345 (46%), Gaps = 7/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A++    +     D         + +S + +++   ++      DL  ++ 
Sbjct: 24  DLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKMGGRIDDLEVLVE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 E    +  E      E++E   ++    L     D +  I+ IR+  GG +AA 
Sbjct: 84  LSED--EHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIRSEAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A  R +K EV  +S  ++ G K     ++    +  +  E G HR+ R
Sbjct: 142 FAEMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLSVEQGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP  A    VD+P  ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 202 ISPFDNQGRRQTSFAGVEVLPVVAETDHVDVPENEVRVDVYRSSGPGGQSVNTTDSAVRL 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +EKSQ QN+  AM+VL+A+L +  RK    E  A +     SG    +
Sbjct: 262 THLPTGIVVTCQNEKSQLQNKAAAMRVLQAKLLEKARKDRQAELDALKGDD--SGSWGNQ 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +R+Y     + + D R N  +     +  G ID  +   +   + 
Sbjct: 320 MRSYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWRKQ 364


>gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
          Length = 383

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 158/346 (45%), Gaps = 7/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  ++   A +E + +     D      +  + +S +  ++   ++ +    DL  +  
Sbjct: 38  DLDKMRADIAVLEEQAAAPSLWDDPENAQKITSRLSYLQGQLRKAEELRSRIDDLEVLFE 97

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             +++ +    A+             E  +    L     D +  ++ IRA  GG +AA 
Sbjct: 98  LADAEDDADARAEAVAELDSVRKAVDE--MEVRTLLSGEYDSREALVNIRAEAGGVDAAD 155

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K EV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 156 FAEQLQRMYLRWAERHGYKTEVYDTSYAEEAGIKSTTFAVQIPYAYGTLSVEQGTHRLVR 215

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       ++I   ++RID  R+SG GGQ VNTTDSAVR+
Sbjct: 216 ISPFDNQGRRQTSFAGVEVLPVVEKTDHIEIDESELRIDVYRSSGPGGQGVNTTDSAVRL 275

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G      +
Sbjct: 276 THIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWGNQ 333

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +   + VL G +D  +   +   + +
Sbjct: 334 MRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRKQQ 379


>gi|323441389|gb|EGA99047.1| peptide chain release factor 2 [Staphylococcus aureus O46]
          Length = 331

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 107/334 (32%), Positives = 168/334 (50%), Gaps = 17/334 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I++       +  +      ++ +   +    DL
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+R
Sbjct: 61  EQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + ++VE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEKKGFEVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V 
Sbjct: 176 TSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + DHR N    K++ V+ G I   I   L  
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 326


>gi|227552028|ref|ZP_03982077.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
 gi|257879881|ref|ZP_05659534.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
 gi|257882725|ref|ZP_05662378.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
 gi|257884039|ref|ZP_05663692.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
 gi|257890396|ref|ZP_05670049.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
 gi|257895380|ref|ZP_05675033.1| peptide chain release factor 2 [Enterococcus faecium Com12]
 gi|257897991|ref|ZP_05677644.1| peptide chain release factor 2 [Enterococcus faecium Com15]
 gi|260559609|ref|ZP_05831789.1| peptide chain release factor 2 [Enterococcus faecium C68]
 gi|261208674|ref|ZP_05923111.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
 gi|289566068|ref|ZP_06446505.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
 gi|293378249|ref|ZP_06624418.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
 gi|293556398|ref|ZP_06674979.1| peptide chain release factor 2 [Enterococcus faecium E1039]
 gi|293560376|ref|ZP_06676869.1| peptide chain release factor 2 [Enterococcus faecium E1162]
 gi|293568705|ref|ZP_06680020.1| peptide chain release factor 2 [Enterococcus faecium E1071]
 gi|293572408|ref|ZP_06683388.1| peptide chain release factor 2 [Enterococcus faecium E980]
 gi|294616268|ref|ZP_06696061.1| peptide chain release factor 2 [Enterococcus faecium E1636]
 gi|294617600|ref|ZP_06697230.1| peptide chain release factor 2 [Enterococcus faecium E1679]
 gi|294622340|ref|ZP_06701373.1| peptide chain release factor 2 [Enterococcus faecium U0317]
 gi|314939593|ref|ZP_07846820.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
 gi|314941219|ref|ZP_07848115.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
 gi|314948616|ref|ZP_07851991.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
 gi|314953358|ref|ZP_07856285.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
 gi|314993437|ref|ZP_07858802.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
 gi|314995786|ref|ZP_07860875.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
 gi|227178781|gb|EEI59753.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
 gi|257814109|gb|EEV42867.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
 gi|257818383|gb|EEV45711.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
 gi|257819877|gb|EEV47025.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
 gi|257826756|gb|EEV53382.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
 gi|257831945|gb|EEV58366.1| peptide chain release factor 2 [Enterococcus faecium Com12]
 gi|257835903|gb|EEV60977.1| peptide chain release factor 2 [Enterococcus faecium Com15]
 gi|260074277|gb|EEW62599.1| peptide chain release factor 2 [Enterococcus faecium C68]
 gi|260077176|gb|EEW64896.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
 gi|289162175|gb|EFD10038.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
 gi|291588665|gb|EFF20498.1| peptide chain release factor 2 [Enterococcus faecium E1071]
 gi|291590782|gb|EFF22498.1| peptide chain release factor 2 [Enterococcus faecium E1636]
 gi|291596206|gb|EFF27469.1| peptide chain release factor 2 [Enterococcus faecium E1679]
 gi|291598167|gb|EFF29266.1| peptide chain release factor 2 [Enterococcus faecium U0317]
 gi|291601465|gb|EFF31736.1| peptide chain release factor 2 [Enterococcus faecium E1039]
 gi|291605664|gb|EFF35105.1| peptide chain release factor 2 [Enterococcus faecium E1162]
 gi|291607470|gb|EFF36812.1| peptide chain release factor 2 [Enterococcus faecium E980]
 gi|292643113|gb|EFF61254.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
 gi|313590058|gb|EFR68903.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
 gi|313592102|gb|EFR70947.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
 gi|313594634|gb|EFR73479.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
 gi|313599943|gb|EFR78786.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
 gi|313641133|gb|EFS05713.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
 gi|313644947|gb|EFS09527.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
          Length = 327

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 170/333 (51%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT---VIGDHNSDSEIRDLA 79
           M+E    D      +  +  +        +    +E +++     ++ +    +   +  
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                     + E        +L     D  + I+E+  G GG+E+  +   L RMY R+
Sbjct: 61  -----TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    ++VE L     D+ G K +   I G   F  +K E GVHR+ R+   +++ R HT
Sbjct: 116 AEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V+PE    ID++I  +D++IDT RASG+GGQH+N T+SAVRITH+PTG +V + 
Sbjct: 176 SFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +++SQ +NR +AM +L+A+LY +E ++   E +A R  Q  IG G    +IR+Y F    
Sbjct: 236 AQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N+    ++ V+ G +D  I+  L  H
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLKMH 325


>gi|223932890|ref|ZP_03624886.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
 gi|330832393|ref|YP_004401218.1| peptide chain release factor 2 [Streptococcus suis ST3]
 gi|223898471|gb|EEF64836.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
 gi|329306616|gb|AEB81032.1| peptide chain release factor 2 [Streptococcus suis ST3]
          Length = 325

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 99/330 (30%), Positives = 178/330 (53%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  +   +    ++ + +    + Q      +   ++     D  +RD    +
Sbjct: 1   MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           ++ ++K +   E      LL  D  D  + ILEI  G+GG+EA  +   L RMY+RY   
Sbjct: 61  LVELDKTMTAYE----MTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + VE L     D+ G K +  + +G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+++I  +++++DT R+ G+GGQ+VN   + VR+THIPTGI+  S+ ++
Sbjct: 177 SVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR    + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|254820379|ref|ZP_05225380.1| peptide chain release factor 2 [Mycobacterium intracellulare ATCC
           13950]
          Length = 370

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 163/346 (47%), Gaps = 5/346 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R  ++E   S+    D   +     + +S    ++   ++ +    DL  +  
Sbjct: 24  DVDGLRARIEKLEREASDPQLWDDQTRAQRVTSELSHAQGELRRIEELRGRLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + E    A  E  A  K ++          L     D++  ++ IR+G GG +AA 
Sbjct: 84  LAAEEGEGAAEALAEADAELKALQAEIEATEVRTLLSGEYDEREALVTIRSGAGGVDAAD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A   K+ VE+  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 144 WAEMLMRMYIRWAEQHKYPVELFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 204 ISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVRL 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K + GS     +
Sbjct: 264 THVPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDAL-KGEGGS-SWGNQ 321

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 322 MRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWRNRK 367


>gi|114764683|ref|ZP_01443868.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601]
 gi|114542883|gb|EAU45904.1| peptide chain release factor 2 [Roseovarius sp. HTCC2601]
          Length = 373

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 120/339 (35%), Positives = 166/339 (48%), Gaps = 6/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  +  Y   KQE  D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDDPQAAQKLMRDRQFLVDAMETYTSIKQELSDNVELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             D    E     K + E   +     L     D     LEI AG GG+EA  +   L R
Sbjct: 91  --DEVVSEAEGALKALAEKAGQKELEALLDGEADGNDTFLEINAGAGGTEACDWAAMLQR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  R ++VE+ S     + G K +   ISG   +  +K ESGVHR+ R+      
Sbjct: 149 MYVRWAEKRGYEVELQSEEAGAEAGIKSVAYKISGTNAYGWLKSESGVHRLVRISPFGK- 207

Query: 195 GRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           G   TS A+V V P     I++D+   DIR+DT R+SG+GGQHVNTTDSAVRITH+PTGI
Sbjct: 208 GTRETSFASVWVYPVVDDNIEIDVNPSDIRVDTYRSSGAGGQHVNTTDSAVRITHMPTGI 267

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R   E +A  + + G      +IR+Y    
Sbjct: 268 VVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQHEAK-GDAGWGNQIRSYVLQP 326

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R +      + VL G +D  +   L    A  
Sbjct: 327 YQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQKAAGK 365


>gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
 gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
          Length = 378

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 104/350 (29%), Positives = 177/350 (50%), Gaps = 11/350 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    AE E +MS+    D      +     + + ++   +   ++  +DL  +  
Sbjct: 31  DLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSLQKSVEDLTAMAE 90

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + + +  D+       IEK  ++LE      LL +  D   + ILEI  G GG+E+  
Sbjct: 91  LLSEEDD-ADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS-NNAILEIHPGEGGTESTD 148

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +  +L+RMY R+A    +KVEV      D  G       I G   +  ++ E GVHR  R
Sbjct: 149 WASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLRSEKGVHRFVR 208

Query: 188 VPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   +++GR HTS  ++ V+P  +  EI+++I  +D+++D  R+ G+GGQ+VN   +AVR
Sbjct: 209 ISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQNVNKVSTAVR 268

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           +THIPTG++V +  E++Q+ NR  AMK+L+A+LY+ E ++   E +     KL +  G  
Sbjct: 269 LTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSGTKLDVAWG-- 326

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y F   R + D R        + V+ G +D  IN  L    ++ 
Sbjct: 327 -SQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWKLSQK 375


>gi|242129269|gb|ACS83718.1| peptide chain release factor 2 [uncultured bacterium AOCefta2]
          Length = 367

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 172/342 (50%), Gaps = 14/342 (4%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSE 74
             +E   +     +   +  E    ++ +   +  +D   ++  D   +        D  
Sbjct: 31  ERLEAESAAGDFWNDNQRAQEHLKKLTALKRVVEPWDALDRDTSDSLEMAEMLKAEGDES 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
           +    + +   + + + +LE    +  +  + +D     L I  G GG+E+  +   L R
Sbjct: 91  MAPELEKQAAELAQRLNDLE----FKSMLSEAEDVSDSFLHIHPGAGGTESCDWANMLLR 146

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE++     +  G   +   + G   F  +K ESGVHR+ R+   +A+
Sbjct: 147 MYTRWAERKGFKVELIDLQPGEGAGISRVTLAVRGEYAFGYLKAESGVHRLVRISPFDAN 206

Query: 195 GRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS A+V        +I+V+I  +D+RIDT R+SG+GGQHVN TDSAVRITHIPT I
Sbjct: 207 KRRHTSFASVHAYAEVTDDIEVEILDKDLRIDTYRSSGAGGQHVNVTDSAVRITHIPTKI 266

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYN 310
           +V   +E+SQH+N+  AMKVLR+RLY + +++   +++A    K  I  G    +IR+Y 
Sbjct: 267 VVSCQNERSQHKNKATAMKVLRSRLYQLYKEQREADQAAKAGEKKDISWG---SQIRSYV 323

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           F   + + D R ++    +  V+ G ID  I   L +   K 
Sbjct: 324 FQPYQMVKDLRTDVETSNIGAVMDGAIDPFIEAFLRSQMGKQ 365


>gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas
           acidaminovorans]
          Length = 340

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 176/343 (51%), Gaps = 16/343 (4%)

Query: 18  EIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           E+E +M+     +      K++++ + +   +  +   D  K E +   T++     D +
Sbjct: 4   ELEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLL-----DED 58

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
                  E ++    I+    +        D  D    +L I +G GG+E+  +   L R
Sbjct: 59  FNAELLAEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLR 118

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY  +A    +  +++ S   ++ G K +   I G   +  +K E GVHR+ R+    A 
Sbjct: 119 MYAHWAEKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQ 178

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           G+  TS A+V V PE  E  +++I  +D++IDT RASG+GGQ+VNTTDSAVRITH+PT I
Sbjct: 179 GKRQTSFASVFVYPEFDEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNI 238

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYN 310
            V   +E+SQ QNR +AM +L++RLY    ++   E+    N K +IG G+   +IR+Y 
Sbjct: 239 TVTCQNERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGN---QIRSYV 295

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           F   + I DHR N     ++ V+ G ++D I   L  +  + I
Sbjct: 296 FHPYQMIKDHRTNYETGNVDKVMNGDLNDFIYAWLKYNAHQRI 338


>gi|237751447|ref|ZP_04581927.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
 gi|229372813|gb|EEO23204.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
          Length = 367

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 190/341 (55%), Gaps = 14/341 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L+ R  EI    S     +   K   +T+E      I+S  +    +  + ++L  + 
Sbjct: 27  DSLQKRLDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEMKAELDDARELFEIA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   DS   +L    V +++  I+++E E+          D  + I+ I+ G GG+E+ 
Sbjct: 87  -ESEGDSSTLELLFENVESLQSHIQKVEIEVM----LSGEFDSTNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R++  R +KVE+L   D ++ G K     I G   +   K E+GVHR+ 
Sbjct: 142 DWASMLYRMYLRWSERRGFKVELLDYQDGEEAGIKGAAFIIKGENAYGYAKSENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V V PE + +ID++I  +DIRIDT RASG+GGQHVN T+SA+R
Sbjct: 202 RISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  AMK+L+++LY++ER + +   +   K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSEGVANAEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           +IR+Y  +   ++ D R N      + VL G IDD+I  +L
Sbjct: 319 QIRSYVLAPYQQVKDLRSNYATSDTDGVLDGDIDDLIESVL 359


>gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
           700780]
 gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
           700780]
          Length = 325

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ +    + + +  + + ++  ++     D  ++D    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKHTYNTFHKMDELQDEVEILLDFLAEDESVKDELVEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  + + +   E      LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  LDELAQMMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTNFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|296533603|ref|ZP_06896168.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
 gi|296266065|gb|EFH12125.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
          Length = 376

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 172/348 (49%), Gaps = 10/348 (2%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            R  E+  R  +    +   +        + +  ++    + +Q+ +D   +I    ++ 
Sbjct: 30  RRLDEVNARAEDPTLWEKPDEAQAVMRERNRLADQVEGVKKLEQDVKDALELIELAEAEG 89

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           +                           L     D + C +E+ AG GG+EA  +   L 
Sbjct: 90  DGATADAAIADLHSFAAEAK--RREIESLLSGEADMRDCFVEVNAGAGGTEAQDWAQMLL 147

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY+R+A  R +KV++   S+ +  G K     ++G   +  +K ESGVHR+ R+   +A
Sbjct: 148 RMYQRWAEKRGYKVQLTEESEGEQAGIKSATIQVTGPNAYGWLKTESGVHRLVRISPFDA 207

Query: 194 SGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           + R  TS A+V V P    +I+++I   D++ DT RASG+GGQHVN T+S VR THIPTG
Sbjct: 208 AARRQTSFASVYVFPVIDDKIEIEINPADLKTDTFRASGAGGQHVNKTESGVRFTHIPTG 267

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
           I+  ++ ++SQH+NR+ AM++L+ARLY++E ++     +     K  IG G    +IR+Y
Sbjct: 268 IVAASTQDRSQHRNRVIAMEMLKARLYELELRKREEITAGIEAGKTDIGWG---HQIRSY 324

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
             +  + + D R N+     + VL G +DD +   L +        AS
Sbjct: 325 VLAPYQLVKDLRTNVEKGNPDAVLDGELDDFMAAALASRVGAHRSEAS 372


>gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
 gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
          Length = 369

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 101/352 (28%), Positives = 162/352 (46%), Gaps = 10/352 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L     E+    S     +      +  + +S   +++      +Q   DL  +  
Sbjct: 24  DVDRLARSIDELSEAASAPDLWNDQENAQKVTSRLSHAQAELKRIKDLRQRLDDLEVLFE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D +    AQ E+L ++KEI   E       L     D++  ++ IR+  GG +AA 
Sbjct: 84  LGDEDPDTYLEAQQELLGLQKEIDAQEV----RTLLSGEYDEREALVTIRSEAGGVDAAD 139

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R++    +  EV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 140 FAEMLMRMYLRWSERHGYNTEVYDTSYAEEAGIKSTTFQVKAPYAYGTLSVEQGTHRLVR 199

Query: 188 VPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V         VD+  +D+R+D  R+SG GGQ VNTTDSAVRI
Sbjct: 200 ISPFDNQGRRQTSFAGVEVAPVVETSDHVDVDEKDLRVDVYRSSGPGGQGVNTTDSAVRI 259

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AM VL+++L +  R+       A +      G+   +
Sbjct: 260 THLPTGIVVSCQNERSQIQNKASAMAVLQSKLLERRRQEERAVMDALKDTGNSWGN---Q 316

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +R+Y     + + D R N  +     V  G IDD I   +   ++    +AS
Sbjct: 317 MRSYVLHPYQMVKDLRTNFEVGNPSAVFDGEIDDFIEAGIRWRRSTEAEAAS 368


>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
           155]
 gi|166225108|sp|A0QU58|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
           155]
          Length = 368

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 162/349 (46%), Gaps = 13/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL---HT 64
            +  L+NR  ++E   S+    D   +  +  + +S   +++   +  +Q   DL   + 
Sbjct: 24  DVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGLRQRLDDLPVLYE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +     E+ +         E              L     D++  ++ IR+G GG +
Sbjct: 84  LAAEAGGPDEVAEADAELAKLREDIEAM-----EVRTLLSGEYDEREAVVTIRSGAGGVD 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA +   L RMY R+A    + VE+  +S  ++ G K     +     +  +  E G HR
Sbjct: 139 AADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +   R  TS A V VLP       ++IP  DIR+D  R+SG GGQ VNTTDSA
Sbjct: 199 LVRISPFDNQSRRQTSFADVEVLPVVETTDHIEIPENDIRVDVYRSSGPGGQSVNTTDSA 258

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K   GS   
Sbjct: 259 VRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAELDAL-KGDGGS-SW 316

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             ++R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 317 GNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGIRWRNRK 365


>gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
 gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
          Length = 356

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 165/342 (48%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK R  ++E   S+    D      ++   +  + +++   +Q +    D    + 
Sbjct: 7   DVPALKARQQDLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  D E  D    E       +R   +      L     D +  +L I AG GG++A  
Sbjct: 67  LY--DLEPDDDMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 125 WAQMLLRMYTRWAEDHGMKVSVDELSEGEEAGIKSATIEIDGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+   E+D+DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLEDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L+A+L  + +++ A E +  R   I       +
Sbjct: 245 LHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R       ++ V+ G++D  I  LL  
Sbjct: 304 IRNYVFHPYQMVKDLRTQEETTDVQGVMDGHLDPFIQALLRQ 345


>gi|172041186|ref|YP_001800900.1| peptide chain release factor 2 [Corynebacterium urealyticum DSM
           7109]
 gi|171852490|emb|CAQ05466.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM
           7109]
          Length = 377

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 102/356 (28%), Positives = 172/356 (48%), Gaps = 9/356 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L  R  E+E + ++    D      +  + +S + +K+    + +Q  +DL  +  
Sbjct: 24  DLDELDWRARELEDQAADPSLWDDPDHAQQVTSELSRVQAKLKKIRELRQRLEDLPVLYN 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIREL----ENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               ++     A  + +A+ +E R         +    +     D +  ++ IR+G GG 
Sbjct: 84  MAEEEAAEDPAASEDAVAMAEEERSALRAAIESLEITTMLSGEYDQREALVNIRSGAGGV 143

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA +   L RMY R+A     KV++   S  ++ G K     I G  ++  +  E G H
Sbjct: 144 DAADWAEMLLRMYTRWAEQHGHKVDIYDISYAEEAGIKSATFVIHGDYMYGTLSVEQGAH 203

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +  GR  TS A V VLP       +++P  D+R+D  R+SG GGQ VNTTDS
Sbjct: 204 RLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVYRSSGPGGQSVNTTDS 263

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+THIPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+  
Sbjct: 264 AVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEEKAEMDAL--GAGGNAS 321

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
              ++R+Y     + + D R    +   + VL G +D +I   +    A+     +
Sbjct: 322 WGNQMRSYVLHPYQMVKDLRTEYEVGDPQKVLDGDLDGLIEAGIRWRMAQQQEEGA 377


>gi|118444993|ref|YP_878978.1| peptide chain release factor 2 [Clostridium novyi NT]
 gi|118135449|gb|ABK62493.1| peptide chain release factor 2 [Clostridium novyi NT]
          Length = 337

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 182/342 (53%), Gaps = 10/342 (2%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++ R  E+E +M ES   D   K  E       I  +I  Y+  K   +DL  +     S
Sbjct: 1   MEKRLGELEHKMQESDFWDDINKAQEITQEAKGIKDRIDGYNSTKTRIEDLEVL--IEMS 58

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
             E  + +  E+L   +EI  + +     +L     D  + I+ + +G GG++A  +   
Sbjct: 59  IEEEDESSIEEILNEVEEIESIIDNFKVEILLSGEYDKNNAIVTLHSGAGGTDAQDWTEM 118

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A  R +KV+VL     D+ G K     I+G   +  +K E G+HR+ R+   
Sbjct: 119 LLRMYTRWAEKRGYKVDVLDILPGDEAGIKSANLKITGEFAYGYLKAEKGIHRLVRISPF 178

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+G+  TS A++ V+PE     D++I  +D+RIDT RASG+GGQH+N TDSAVRITHIP
Sbjct: 179 NANGKRQTSFASLEVIPELKENQDIEIKADDLRIDTYRASGAGGQHINKTDSAVRITHIP 238

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIR 307
           TGI+V + SE+SQ QN+  AM +L+++L +++ +    +         +IG G    +IR
Sbjct: 239 TGIVVQSQSERSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWG---SQIR 295

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +Y F     + DHR N  +  ++ V+ G ID  I   L A+ 
Sbjct: 296 SYVFQPYTMVKDHRTNTEMGNVDAVMDGDIDIFILEYLKANN 337


>gi|30692908|ref|NP_851096.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 456

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 165/351 (47%), Gaps = 5/351 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+     +E + +++   D   K  E  ++++ +  ++ +  + K   +D  T++  
Sbjct: 104 LQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKL 163

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                        E + I KE+ +  ++     L     D +  ++ I AG GG++A  +
Sbjct: 164 TEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDW 223

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K +V+  S+ ++ G K     I GR  +  +  E G HR+ R 
Sbjct: 224 ADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQ 283

Query: 189 PATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               + G   TS + V V+P      + ++IP ED+ I   RA G GGQ+VN  ++AVRI
Sbjct: 284 SPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRI 343

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG+ V  + E+SQ  N+ RA+  L+A+L  +  ++ A E    R   +   +  ++
Sbjct: 344 THIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVK-AEWGQQ 402

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           IR Y F   + + D R       +  V+ G +D  I   L       + SA
Sbjct: 403 IRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHKYTLAMASA 453


>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 370

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 183/350 (52%), Gaps = 16/350 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVI 66
             L+     ++ +M++    +   K  E  +    +   + +I   D+K ++ QD   ++
Sbjct: 27  EKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILKIDKKVKDLQDYIQLL 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                +S   ++ +         + +    +    L  D  D K+ IL ++AG+GG EA 
Sbjct: 87  EMEKDESLYTEVEKEINH-----LEKELERLEISSLLSDEMDSKNAILTLQAGSGGVEAC 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + ++VE++    +D  G K     I G   +  +K E GVHR+ 
Sbjct: 142 DWTQMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPFAYGYLKGEQGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ R HTS A V+V+PE  E   V+I  ED+RIDT RASG+GGQHVN TDSAVR
Sbjct: 202 RISPFDANKRRHTSFAAVSVIPEIDEEIKVEINEEDLRIDTFRASGAGGQHVNKTDSAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDR 302
           ITHIPTGI+V   SE+SQ QN+L+A+ +L+A+LY +E ++   ++      K  I  G+ 
Sbjct: 262 ITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEKQKELEGEKKDITWGN- 320

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y F   + + D R    +  +E V+ G ID  I   L     + 
Sbjct: 321 --QIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYLKWKAKEK 368


>gi|149914781|ref|ZP_01903311.1| LexA repressor [Roseobacter sp. AzwK-3b]
 gi|149811574|gb|EDM71409.1| LexA repressor [Roseobacter sp. AzwK-3b]
          Length = 375

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 176/339 (51%), Gaps = 9/339 (2%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHN 70
           ++R  E   R+ +    D   K  +       ++  I+ +D  +QE QD   +I   +  
Sbjct: 29  RHRLEEFNARVEDPQLWDDPAKAQKLMRDRQGLVDAITTHDTIQQEMQDNVELIELGEME 88

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D ++   A+  + A+ ++  + E       L     D     LEI AG GG+E+  +  
Sbjct: 89  GDPDVVAEAEAAIKALARKAAQKEL----EALLNGEADANDAFLEIHAGAGGTESCDWAS 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A    + VE+ S +  ++ G K +   ++G   +  +K ESGVHR+ R+  
Sbjct: 145 MLARMYVRWAEQHGYTVELQSETAGEEAGIKSVTYKVTGHNAYGWLKSESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ + HTS ++V V P     I++++   DIRIDT R+SG+GGQHVN TDSAVRITH 
Sbjct: 205 FDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTFRSSGAGGQHVNKTDSAVRITHH 264

Query: 250 PTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           PTGI+VTSSEKSQHQNR  AMK L++RLY +E  R     +     + G      +IR+Y
Sbjct: 265 PTGIVVTSSEKSQHQNRDIAMKALKSRLYQMELDRRNEAIAEAHDAK-GDAGWGNQIRSY 323

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
                + + D R ++     + VL G +D  +   L   
Sbjct: 324 VLQPYQMVKDLRTSVETSDTKGVLDGDLDQFMAATLAMD 362


>gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis C231]
 gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis I19]
          Length = 366

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 170/345 (49%), Gaps = 9/345 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L +R  E+E + S+    D      +    +S + +++      +Q   D+  +    
Sbjct: 26  EELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQRIDDMPVMYELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             + +  +LA  E+  +  EI  LE       +     D +  ++ IR+G GG +AA + 
Sbjct: 86  EEEGDDTELADEELAELTSEIESLEV----KTMLSGEYDAREAVINIRSGAGGVDAADWA 141

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     KV++   S  ++ G K     + G  ++ ++  E G HR+ R+ 
Sbjct: 142 EMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRIS 201

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A + VLP       +DIP  ++R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 202 PFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTH 261

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++R
Sbjct: 262 IPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDAL--GAGGNASWGNQMR 319

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +Y     + + D R N  +   + VL G +D  +   +    A+ 
Sbjct: 320 SYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWRMAQQ 364


>gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 333

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 105/333 (31%), Positives = 168/333 (50%), Gaps = 17/333 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M++    D   K  E      A+  +++     + + ++    H ++ +   +    DL
Sbjct: 1   MMTDPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
                       ++  ++    LL     D  + ILE+  G GG+E+  +   L RMY+R
Sbjct: 61  E-----EEANAFKDKLDQFELQLLLNGPYDANNAILELHPGAGGTESQDWASMLLRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           YA  + +KVE       D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YAEQQGFKVEFADYLPGDEAGVKSVTLVIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEIDVDI--PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS  +  V+PE +  +++I    +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V 
Sbjct: 176 TSFVSCDVIPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              + DHR N     +  V+ G I   I   L 
Sbjct: 293 YSMVKDHRTNEETGNVNAVMDGEIGPFIEAYLR 325


>gi|319442594|ref|ZP_07991750.1| peptide chain release factor 2 [Corynebacterium variabile DSM
           44702]
          Length = 356

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 164/351 (46%), Gaps = 9/351 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L +R  E+E + ++    D      +  + +S + S++      +    DL  +  
Sbjct: 3   DLDELDDRVRELEAQAADPSLWDDPDHAQQVTSQLSHVQSRLKKVRGLRSRLDDLPVMYE 62

Query: 68  DHNSDSEIRDLAQIEVLAIEKEI----RELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +  +        E   +        R     +    +     DD+  ++ IR+  GG 
Sbjct: 63  MADEAAVEDAAEGAEAKELADAELADLRADIESLEVTTMLSGEYDDREAVVNIRSAAGGV 122

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA +   L RMY R+A     KVEV   S  ++ G K     + G  ++  +  E G H
Sbjct: 123 DAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVHGDYMYGTLSVEQGTH 182

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +  GR  TS A V VLP       VDI   D+R+D  R+SG GGQ VNTTDS
Sbjct: 183 RLVRISPFDNQGRRQTSFAEVEVLPVVETSDHVDIDENDVRVDVYRSSGPGGQSVNTTDS 242

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+THIPTGI+V   +EKSQ QN+  AM+VL A+L + +R+  A E  A R    GS  
Sbjct: 243 AVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLERKRQEEAAEMDALRGD--GSNS 300

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
              ++R+Y     + + D R N  +     VL G ID ++   +    A+ 
Sbjct: 301 WGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGGIDGLLEAGIRWRMAQQ 351


>gi|253988706|ref|YP_003040062.1| peptide chain release factor 2 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211637969|emb|CAR66597.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780156|emb|CAQ83317.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica]
          Length = 310

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 103/316 (32%), Positives = 171/316 (54%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E +++  I+  I   +Q  ++ Q L  +  + + +    +       A  +++    
Sbjct: 1   MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFHEAV-----AELEQLEGKL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +     D  +C L+++AG+GG+EA  +   L RMY R+A  + +K E++  SD
Sbjct: 56  GQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            +  G K     I G   +  ++ E+GVHR+ R    ++ GR HTS ++  + PE   +I
Sbjct: 116 GEVAGLKSATIRIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D++I   D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK 
Sbjct: 176 DIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+LY++E ++    R      K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLYELEMQKKNANRQEMEENKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQS 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGDLDKFIEASLKA 308


>gi|15604144|ref|NP_220659.1| peptide chain release factor 2 [Rickettsia prowazekii str. Madrid
           E]
 gi|6225944|sp|Q9ZDQ2|RF2_RICPR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3860836|emb|CAA14736.1| PEPTIDE CHAIN RELEASE FACTOR 2 (prfB) [Rickettsia prowazekii]
          Length = 369

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 101/350 (28%), Positives = 172/350 (49%), Gaps = 16/350 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I  L  R  E+E   ++    +       L  E   +   ++  +      +E  +L  
Sbjct: 24  DIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKLNVFNKLKSNLKEILELEA 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +    N           ++    K++  +  +     L     D  +C LEI AG GG+E
Sbjct: 84  MAEVENDLE-----TLNQIEQDFKKLSIITAKFETECLFSGETDCNNCFLEINAGAGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   + RMY R+A    +K ++++  + ++ G K     I G+  +   K ESGVHR
Sbjct: 139 SHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKRAYGWFKTESGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    A+G+  TS A+  + PE  +   + I  +D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 199 LVRISPFNAAGKRMTSFASSWIYPEIDDDIAITIEDKDLRIDTFRSSGAGGQHVNTTDSA 258

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSG 300
           VRITHIPT  +    S++SQH+N+ +AMK+L+A+LY +E ++     ++    K     G
Sbjct: 259 VRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNENVDKQNANKTDNSWG 318

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
               +IR+Y     + + D R N      + VL G ++D ++  L+ + +
Sbjct: 319 ---HQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFVSASLSMNNS 365


>gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564]
 gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564]
          Length = 325

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 182/330 (55%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  +++    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEELVAQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LAELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|58582496|ref|YP_201512.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84624384|ref|YP_451756.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|166711947|ref|ZP_02243154.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzicola
           BLS256]
 gi|188575993|ref|YP_001912922.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58427090|gb|AAW76127.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368324|dbj|BAE69482.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188520445|gb|ACD58390.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 329

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 108/324 (33%), Positives = 161/324 (49%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L  E + +   +  I+       +  DL  +  +   D +       ++   
Sbjct: 3   NDAERAQALGRERSMLEKTVIGIADVLSGLVDAGDLLELA-ESEQDEDTALAVIADLDKY 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           +  + +LE    +  +     D  +  ++I+AG GG+EA  +   L RMY R+A  R WK
Sbjct: 62  QTHVEKLE----FERMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  S  +  G K     I G   +  +K E GVHR+ R    ++  R HTS  +V V
Sbjct: 118 TELMEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFV 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE    I++DI   D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQ
Sbjct: 178 SPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQ 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           NR  AMK+L A+LY++E ++   ER A    K  IG G    +IR Y   Q RI D R  
Sbjct: 238 NRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D+ +   L A
Sbjct: 295 IERSDTQKVLDGDLDEFVEASLKA 318


>gi|300722130|ref|YP_003711413.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC
           19061]
 gi|297628630|emb|CBJ89208.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC
           19061]
          Length = 310

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 171/316 (54%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E +++  I+  I   DQ  ++   L  +  + + +    +       A   ++ E  
Sbjct: 1   MGKERSSLESIVETIDQLDQGLEDVNGLLELAVEADDEETFNEAV-----AELDQLEEKL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
             + +  +     D  +C L+++AG+GG+EA  +   L RMY R+A  + +K E++  SD
Sbjct: 56  GLLEFRRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     I G   +  ++ E+GVHR+ R    ++ GR HTS ++  + PE   +I
Sbjct: 116 GDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D++I   D+RID  RASG+GGQHVN T+SAVRITH+PTGI+    +++SQH+N+ +AMK 
Sbjct: 176 DIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPTGIVTQCQTDRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+LY++E ++   ++      K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLYELEMQKKNADKQAMEENKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQS 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGDLDKFIEASLKA 308


>gi|327441322|dbj|BAK17687.1| protein chain release factor B [Solibacillus silvestris StLB046]
          Length = 328

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    +            + I + ++ Y +    +++L   +     + +     +I 
Sbjct: 1   MLEPEFWNDQNGAQAIINESNGIKAVVNEYKELVDTQENLEMTLELLREEPDEELQEEIG 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               E + +  E E+  L    +  D  + ILE+  G GG+E+  +   L RMY R+A  
Sbjct: 61  KELAEFQTKMEEFELQML--LSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KV  +     D+ G K +   ISG   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVTTIDYLPGDEAGIKSVTLQISGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  +  ++DI  ED+++DT RA+G+GGQH+NTTDSAVRITH+PTG++V   SE+
Sbjct: 179 SCDVMPEFNDEIEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVVQCQSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR  AMK+L+++LY +E ++   +    R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR +     +  V+ G +D  I   L 
Sbjct: 296 DHRTSAETGNVGAVMDGDLDIFITAYLR 323


>gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6]
 gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6]
          Length = 325

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 100/330 (30%), Positives = 180/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + +    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHEELVTQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
 gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
          Length = 368

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 125/373 (33%), Positives = 190/373 (50%), Gaps = 31/373 (8%)

Query: 1   MVFLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISP 44
           M+F   K++  L+ R A++                E+ +      D      +    +S 
Sbjct: 1   MIFEWKKELESLEVRLADLRVSLDVPQREDKISILEIELQRPDFWDNPEGAQKVMQELSY 60

Query: 45  IISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
              K+  Y   +Q+  D+ T+        D  +    +  +LA+++ +  LE      +L
Sbjct: 61  QQEKVKTYYTLQQQLDDMLTLYQMAVEEKDESLEPELEEGILALQQRLDGLEL----EIL 116

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D  + I+ + AG GG+EA  +V  L+RMY RY     +KVE +     D+ G K 
Sbjct: 117 LSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGIKS 176

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLE 220
              + +G   F  +K E GVHR+ R+   +ASGR HTS A+V V+PE  E + +  IP E
Sbjct: 177 ATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIPPE 236

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+++DT RASG+GGQHVN T SAVRITH+PTGI+V + SE+SQ QNR   +++L+A+L +
Sbjct: 237 DLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKLLE 296

Query: 280 VERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYI 336
           ++RK+  +E S  R  Q  I  G    +IR+Y F     + DHR N        V+ G I
Sbjct: 297 LKRKQQEDEISEIRGEQQEIAWG---SQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEI 353

Query: 337 DDIINPLLTAHQA 349
           D  I   L   +A
Sbjct: 354 DQFIAAYLQKTKA 366


>gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 372

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 120/353 (33%), Positives = 179/353 (50%), Gaps = 10/353 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I  L++    +E   S+           +    I  I  KI  + +   + +DL
Sbjct: 21  MRVSLDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERFQKLYSQWEDL 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      +       ++E   I  E +  E +I  L       D  + IL I AG GG
Sbjct: 81  KVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEIL--LNGPYDKNNAILSIHAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY R+AA + +KVE L     ++ G K +   I G   +  +K E GV
Sbjct: 139 TEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A V VLPE   + D++I  ED+ IDT R+SG+GGQHVN T+
Sbjct: 199 HRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHVNKTE 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRI HIPTGI+V   +E+SQH+NR  A+K+L+A+L +++ K    +    +  Q  IG
Sbjct: 259 SAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIG 318

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            G+   +IR+Y F     + DHR    +  +E V+ G ID  IN  L   + +
Sbjct: 319 WGN---QIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLKKFRNE 368


>gi|146319066|ref|YP_001198778.1| peptide chain release factor 2 [Streptococcus suis 05ZYH33]
 gi|146321272|ref|YP_001200983.1| peptide chain release factor 2 [Streptococcus suis 98HAH33]
 gi|145689872|gb|ABP90378.1| Protein chain release factor B [Streptococcus suis 05ZYH33]
 gi|145692078|gb|ABP92583.1| Protein chain release factor B [Streptococcus suis 98HAH33]
 gi|292558711|gb|ADE31712.1| Peptide chain release factor 2 [Streptococcus suis GZ1]
 gi|319758505|gb|ADV70447.1| peptide chain release factor 2 [Streptococcus suis JS14]
          Length = 325

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 178/330 (53%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  +   +    ++ + +    + Q      +   ++     D  +RD    +
Sbjct: 1   MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEK 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           ++ ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   L RMY+RY   
Sbjct: 61  LVELDKTMTAYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + VE L     D+ G K +  + +G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+++I  +++++DT R+ G+GGQ+VN   + VR+THIPTGI+  S+ ++
Sbjct: 177 SVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR    + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 327

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 181/333 (54%), Gaps = 12/333 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+ES   +  I   +    ++ + S    +   ++   +    +     D  ++D  +  
Sbjct: 1   MTESDFWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDLEAS 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  + + +   E      LL  +  D  + ILEI  G+GG+EA  +   LFRMY R+   
Sbjct: 61  LETLGQILASYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFV 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           DHR N  + +++ V+ G I+  I+  L    + 
Sbjct: 294 DHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMSD 326


>gi|30692913|ref|NP_851097.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana]
 gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 455

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 165/351 (47%), Gaps = 5/351 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+     +E + +++   D   K  E  ++++ +  ++ +  + K   +D  T++  
Sbjct: 103 LQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKL 162

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                        E + I KE+ +  ++     L     D +  ++ I AG GG++A  +
Sbjct: 163 TEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDW 222

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K +V+  S+ ++ G K     I GR  +  +  E G HR+ R 
Sbjct: 223 ADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQ 282

Query: 189 PATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               + G   TS + V V+P      + ++IP ED+ I   RA G GGQ+VN  ++AVRI
Sbjct: 283 SPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRI 342

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG+ V  + E+SQ  N+ RA+  L+A+L  +  ++ A E    R   +   +  ++
Sbjct: 343 THIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVK-AEWGQQ 401

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           IR Y F   + + D R       +  V+ G +D  I   L       + SA
Sbjct: 402 IRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHKYTLAMASA 452


>gi|257877567|ref|ZP_05657220.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
 gi|257811733|gb|EEV40553.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
          Length = 329

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 105/328 (32%), Positives = 175/328 (53%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    D   K  +   A +        ++Q  +E ++L  ++     +++    A++E
Sbjct: 1   MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               +   +         +L  +  D  + I+E+  G GG+E+  +   L RMY R+   
Sbjct: 61  ARITKLNEKM--ASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++VE L     D+ G K +   + G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 119 HGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFC 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    IDV+I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +++
Sbjct: 179 SVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR +AM +L+A+LY +E ++   E +A R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N     ++ V+ G +D  I+  L 
Sbjct: 296 DHRTNFETGNVQAVMDGDLDGFIDAYLK 323


>gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae
           TIGR4]
 gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
 gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
 gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
           700669]
 gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
 gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
 gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
           700669]
 gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104]
 gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375]
 gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301]
 gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317]
 gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901]
          Length = 325

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 102/330 (30%), Positives = 180/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+ + A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|119025481|ref|YP_909326.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154486912|ref|ZP_02028319.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
           L2-32]
 gi|118765065|dbj|BAF39244.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154084775|gb|EDN83820.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
           L2-32]
          Length = 376

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 177/355 (49%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L     ++E++ +E    D      +  + +S + S++       Q  +D+ T+  
Sbjct: 25  DVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLSAVQSQLKRLASADQRIEDVETLVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G    D++    A+ EV +I+K++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGQEEEDADTLAEAKAEVESIQKDLDDMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +D+P  +IR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G ID+ I   +     +   +A E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAGIRWRHEQRRAAAEE 373


>gi|294677084|ref|YP_003577699.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
 gi|294475904|gb|ADE85292.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
          Length = 375

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 168/346 (48%), Gaps = 5/346 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +    +R  E    +          +  +       ++ K+  Y +  ++  D   +I 
Sbjct: 24  DLETAPHRLEEFNAMIEHGDLWSDPARAQKLMRERQMLMDKLETYRRIDRDLTDNIELIE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +       E     + ++EL        L     D     LEI AG GG+E+  
Sbjct: 84  LGEMEDDPE--IVAEAEKSLRALKELAAAKELEALLDGEADGNDTFLEINAGAGGTESCD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  + + VE+ S +  D+ G + +   ISG+  +  +K ESGVHR  R
Sbjct: 142 WASMLARMYTRWAEKKGYTVELQSETAGDEAGIRSVAYKISGQNAYGWLKSESGVHRQVR 201

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS ++V V P     I++DIP  DIRIDT R+SG+GGQHVNTTDSAVRI
Sbjct: 202 ISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPASDIRIDTYRSSGAGGQHVNTTDSAVRI 261

Query: 247 THIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           TH+PT I+VTSS KSQHQNR  AM  LRARLY +E  +     +A  + + G      +I
Sbjct: 262 THLPTNIVVTSSMKSQHQNREAAMNALRARLYQMELDKRNAAINAQHEAK-GEAGWGNQI 320

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R+Y     + + D R        + VL G +D  +   L    A  
Sbjct: 321 RSYVLQPYQMVKDLRTGHETSDTQGVLDGDLDAFMAATLAMDVAGK 366


>gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
 gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
          Length = 332

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 119/330 (36%), Positives = 175/330 (53%), Gaps = 14/330 (4%)

Query: 23  MSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  S   D            +A+  ++      + + ++   L  +I +  + SE+ D A
Sbjct: 1   MGSSSFWDDSNAAKSTVDRVSALKSVVVPYKELEARVEDFITLSELIEEEGASSELMDDA 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             E   +EK + +LE     L       D  SC L I AG GG+E+  +   L RMY R+
Sbjct: 61  GEESPELEKALDDLEL----LSFLSGKYDSGSCFLSINAGAGGTESCDWADMLLRMYRRW 116

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KV  +S  + ++ G K     I G   F  +K E GVHR+ RV   +++ R HT
Sbjct: 117 AESKGFKVTFVSILEGEEAGIKNCTMFIEGPMAFGYLKAERGVHRLVRVSPFDSNKRRHT 176

Query: 200 SAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  ++ V+P+   E +VDI  +D+R+DT RASG+GGQHVNTTDSA+R+TH+PTGI+V   
Sbjct: 177 SFTSIDVVPDIGDEAEVDIDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGIVVSCQ 236

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR 315
            E+SQH+NR  AMK+L A+L ++++     E  AN   K  IG G    +IR+Y     R
Sbjct: 237 MERSQHKNRATAMKMLGAKLEELKQAEREAELDANAGEKNDIGWG---SQIRSYVLDDRR 293

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           + DHR N +    + VL G ID  I   L 
Sbjct: 294 VKDHRTNHSTSNTDKVLDGDIDPFIQSFLR 323


>gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           obeum A2-162]
          Length = 334

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 173/327 (52%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D      ++   +  +   + IY   + + +D+ T+I     +++       E
Sbjct: 1   MEAPDFWDDAEVSQKKMKELKSMKDDMEIYHSLESQMEDMETMIEMGYEENDPE--IIPE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +  E  +  + I    L     D ++ I+++ AG GG+EA  + G L+RMY R+   
Sbjct: 59  IQEMLDEFEKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDR 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +EVL   D D+ G K +   ++G   +  +K E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGFTMEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+  +  DV+I  +DIRIDT R+SG+GGQH+N T SA+RITH PTGI+V   +E+
Sbjct: 179 SCDVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+ +AM++L+A+L+ ++++    + S  R  ++       +IR+Y       + DH
Sbjct: 239 SQHMNKDKAMQMLKAKLFLLKQQEAEAKLSGIR-GEVTDIGWGNQIRSYVMQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R +     ++ VL G ID  IN  L  
Sbjct: 298 RTSEETGNVDAVLDGEIDPFINAYLKW 324


>gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 372

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 99/349 (28%), Positives = 170/349 (48%), Gaps = 13/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +  +  + AE+  + ++       D   K+T + +++  +++KI+   Q+  +   L+ 
Sbjct: 25  DLEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGIGQRLDDLGVLYE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D++ R  A  E+  + KEI ELE       L     D++  I+ I +  GG +
Sbjct: 85  LA-EAEDDADTRVEADRELDQLRKEIGELEV----RTLLNGPHDEREAIVTINSQAGGVD 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA +   L RMY R+A    +  +V  +S  ++ G K     +     +  ++ E G HR
Sbjct: 140 AADWAQMLQRMYLRWAERHGYPTDVYETSYAEEAGIKSTSFAVKTPFAYGTLRGEHGTHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +   R  TS A V V+P       ++I   D+R+D  R+SG GGQ VNTTDSA
Sbjct: 200 LVRISPFDNQNRRQTSFAGVDVVPVVEQSDHIEIDDGDLRVDVYRSSGPGGQGVNTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V   +E+SQ QN+  AM +L+A+L   +R+         R   + S   
Sbjct: 260 VRITHLPTGIVVSCQNERSQLQNKATAMSMLQAKLLARKREEEQAALDEIRGDSVSS--W 317

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             ++R Y     + + D R          VL G ID+ I+  +   +++
Sbjct: 318 GTQMRNYVLHPYQSVKDVRTGAETGNTSGVLDGDIDEFIDAEIRWMRSR 366


>gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
 gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
          Length = 325

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 179/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ +      +++ ++   +    +   + D  ++   +  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDEDDSVQAELEES 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                +++ ++       LL  +  D  + ILEI  G+GG+EA  +   LFRMY RY   
Sbjct: 61  ----LEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS +
Sbjct: 117 KGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFS 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR    + +++ V+ G ID  I+  L   
Sbjct: 294 DHRTGYEIAQVDKVMDGDIDGFIDAYLKWR 323


>gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
 gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
          Length = 356

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 96/345 (27%), Positives = 159/345 (46%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---T 64
            +  LK R  ++E   ++    D      ++   +  + +++   +Q K+   D      
Sbjct: 7   DVPALKARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDADATVE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +      D  + +          +  R          L     D +  +L I AG GG++
Sbjct: 67  LYALEPDDDMLGEAQTGLTQLRTELDRW-----ELERLLSGEYDKEGAVLSINAGAGGTD 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A     KV V   S+ ++ G K     I GR  +  ++ E G HR
Sbjct: 122 AQDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    A+ +  TS A V V+P+  E   +DIP +D+ I T R+ G+GGQ+VN  ++A
Sbjct: 182 LVRISPFNANDKRQTSFAGVEVMPKIEEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI HIPTG+ V  + E+SQ QN+ +AM +L A+L  + +++ A E +  R   I     
Sbjct: 242 VRILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIR-GDIVEAAW 300

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR Y F   + + D R       ++ V+ G +D  I  LL  
Sbjct: 301 GNQIRNYVFHPYQMVKDLRTQHETNDVQGVMDGDLDPFIQSLLHQ 345


>gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58]
 gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58]
          Length = 342

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 108/336 (32%), Positives = 163/336 (48%), Gaps = 16/336 (4%)

Query: 20  ELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
             +  +    +      KL  E   +   I+ +   +Q+ ++  +L  +      D  ++
Sbjct: 2   NNKAEDPTLWNDASEAQKLMRERQQLDDSINGVKALEQQLKDNIELIELGEMEGDDEIVK 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D          +      N      +     D     +E+ +G GG+E+  +   L RMY
Sbjct: 62  DAEDALKALRSEA-----NRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  + +KVEVL   D D+ G K     + G   F  MK ESGVHR+ R+   +++ R
Sbjct: 117 TRWAERQGFKVEVLEIHDGDEAGIKSATILVKGHNAFGWMKTESGVHRLVRISPYDSNAR 176

Query: 197 VHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-M 254
            HTS +++ V P     I +DI   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI +
Sbjct: 177 RHTSFSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAV 236

Query: 255 VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFS 312
               E+SQH+NR +A  +LRARLY+VE ++        A  K  IG G    +IR+Y   
Sbjct: 237 ACQQERSQHKNRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWG---HQIRSYVLQ 293

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + + D R  +       VL G +++ +   L   
Sbjct: 294 PYQLVKDLRTGVESTAPGNVLDGDLNEFMEAALAHR 329


>gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597]
 gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597]
          Length = 325

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + +    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDFLAEDESVHEELVEQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|319957316|ref|YP_004168579.1| bacterial peptide chain release factor 2 (brf-2) [Nitratifractor
           salsuginis DSM 16511]
 gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor
           salsuginis DSM 16511]
          Length = 372

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 181/344 (52%), Gaps = 14/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +++ R  EIE            D   K+++E   +   ++K        ++ Q+   + 
Sbjct: 27  EEIRKRLDEIEEMQQNPEFWTDSDRAAKISQEKTRLERTLAKYDEAKAALEDAQEYFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D E  ++   E   +++ I++LE  I          D  + I+ I  G GG+E+ 
Sbjct: 87  K-SEGDEETLEMLYDEAENLKEHIQQLEVAIM----LSGEHDSANAIVTIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A    +KVEVL     ++ G K++   I G   +  +K E+G+HR+ 
Sbjct: 142 DWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLKVENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS  +V V PE  +  D++I  +DIRIDT RASG+GGQHVN T+SA+R
Sbjct: 202 RISPFDANAKRHTSFTSVMVSPEINDDIDIEIEDKDIRIDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+V   +++SQH+N+  AMK+L++RLY+ E  +   E     K  IG G    
Sbjct: 262 ITHIPTGIVVQCQNDRSQHKNKAAAMKMLKSRLYEYEMAKKQAEIDGIEKSDIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y      ++ D R       +E +L G ID ++  +L A 
Sbjct: 319 QIRSYVLQPYQQVKDTRSGQAFTNVEAILDGDIDKLLEGVLIAQ 362


>gi|332662344|ref|YP_004445132.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332331158|gb|AEE48259.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 358

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 169/362 (46%), Gaps = 23/362 (6%)

Query: 4   LSHKQICDLKNRF----------------AEIELRMSESPSVDAYIKLTEEYAAISPIIS 47
           ++ +Q+ DL+ R                  E E    +    +   +       +    +
Sbjct: 1   MTIEQLRDLRERLVSLGRYLDVENRLIQIEEQEQLSLDPTFWNDPKRAETILKELKSHKN 60

Query: 48  KISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
            ++ Y   + E  D   ++  +       +    +       I  LE            +
Sbjct: 61  WVAQYKAAEAEVDDAEVLLEFNKEGEATEEEVDQKYAEALAVIEGLEFH----TTLNQPE 116

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D+ + +LEI AG GG+EA  +   L+RMY  +A  R +K   L+  D D  G K     I
Sbjct: 117 DELNVVLEINAGAGGTEACDWAEMLYRMYMMWAQRRGFKFTELNRQDGDVAGLKSASIEI 176

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDT 226
            G  VF  +K E+GVHR+ RV    + G+  TS ++V V       I+++I   D+  DT
Sbjct: 177 EGEYVFGLLKGENGVHRLVRVSPYNSQGKRMTSFSSVFVHPMVDDSIEIEINPADLEWDT 236

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            RASG+GGQHVN T+SAVR+ H+P+GI+     E+SQH NR +AM++L++RLY+ E ++ 
Sbjct: 237 FRASGAGGQHVNKTESAVRVRHLPSGIVAECQQERSQHMNRDKAMQMLKSRLYERELEKQ 296

Query: 286 ANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             E+      ++ + +   +IR+Y     R+ DHR      + + VL G ID+ +   L 
Sbjct: 297 KAEKETIESGKMKN-EWGSQIRSYVLDDRRVKDHRTGYQTSQTDAVLNGDIDEFLKAFLM 355

Query: 346 AH 347
            H
Sbjct: 356 HH 357


>gi|282905164|ref|ZP_06313021.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282331571|gb|EFB61083.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 331

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 17/334 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I++       +  +      ++ +        DL
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFEGEMKEDL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+R
Sbjct: 61  EQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V 
Sbjct: 176 TSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + DHR N    K++ V+ G I   I   L  
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 326


>gi|260427583|ref|ZP_05781562.1| peptide chain release factor 2 [Citreicella sp. SE45]
 gi|260422075|gb|EEX15326.1| peptide chain release factor 2 [Citreicella sp. SE45]
          Length = 397

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 162/339 (47%), Gaps = 6/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  +  Y   KQE  D   +I     + +
Sbjct: 55  RLEEFNARVEDPNLWDDPQAAQKLMRDRQMLVDAMETYSSIKQELSDNVELIEMGEMEED 114

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +++ E        +    +     L     D     LEI AG GG+EA  +   L R
Sbjct: 115 DEVVSEAEAALRALAEKA--GQKELEALLDGEADGNDTFLEINAGAGGTEACDWAAMLQR 172

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  R + VE+       + G K     ISG   +  +K ESGVHR+ R+      
Sbjct: 173 MYVRWAEKRGYDVELQFEEAGAEAGTKSCGYKISGTNAYGWLKSESGVHRLVRISPFGK- 231

Query: 195 GRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           G   TS A+V V P     I++D+   DIRIDT R+SG+GGQHVNTTDSAVRITHIPT I
Sbjct: 232 GTRETSFASVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHIPTNI 291

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  +   E +A  + + G      +IR+Y    
Sbjct: 292 VVTSSEKSQHQNRDIAMKALKSRLYQMELDKRNAEINAQHEAK-GDAGWGNQIRSYVLQP 350

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R +      + VL G +D  +   L    +  
Sbjct: 351 YQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQQASGK 389


>gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC
           53653]
          Length = 370

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 156/346 (45%), Gaps = 7/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  ++   A +E + +     D      +  + +S +   +   ++ +    DL  +  
Sbjct: 25  DLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEELRGRIDDLEVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +    A+ E           E  +    L     D +  ++ IRA  GG +AA 
Sbjct: 85  LAADEGDEDARAEAEAELNAVRKAVDE--MEVRTLLSGEYDAREAVVNIRAEAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K E+  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 143 FAEQLQRMYLRWAERHGYKTEIYETSYAEEAGIKSTTFAVQIPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       ++I   ++RID  R+SG GGQ VNTTDSAVR+
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRIDVYRSSGPGGQGVNTTDSAVRL 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQ QNR  AM VL+A+L D  R+    +  A +    G      +
Sbjct: 263 THIPTGIVVSCQNERSQIQNRATAMNVLQAKLLDRRRQEEQAKMDALKGD--GGNSWGNQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +   + VL G +D  +   +   + +
Sbjct: 321 MRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRKQR 366


>gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
 gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
          Length = 331

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 168/327 (51%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MSE    D   K        + + +    + Q + + +++  +   +  D E  +    E
Sbjct: 1   MSEPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKEDPE--EEIHDE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           ++     + +   +    +L     D  S ILEI  G GG+E+  +   L RMY R+A  
Sbjct: 59  LVERVHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQDWGSMLLRMYTRWAEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +++E +   D ++ G K +  +I G   +  +K E GVHR+ R+   +A+G+ HTS  
Sbjct: 119 HGYRIETVDYQDGEEAGIKSVTLSIEGLNAYGYLKSEKGVHRLVRISPFDAAGKRHTSFC 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           ++ ++P+   +ID++I  +D++ID  RASG+GGQH+N T SAVRITHIPTGI+  + +++
Sbjct: 179 SIDIMPQLEGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ +N+ +AM +L+ +LY +E ++ A E +  R  Q        +IR Y F     + D 
Sbjct: 239 SQFKNKDQAMAMLKTKLYQLEEEKKAAELAEIRGEQ-KDIAWGSQIRNYVFHPYSLVKDL 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R       +  V+ G +D  ++  L  
Sbjct: 298 RSGHETGNIGAVMDGDLDPFMDAYLKW 324


>gi|229823414|ref|ZP_04449483.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271]
 gi|229787189|gb|EEP23303.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271]
          Length = 331

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 110/330 (33%), Positives = 173/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSDSEIRDLAQ 80
           MS     D   K  +  + ++      S     ++   D+   +   D + D++I   A+
Sbjct: 1   MSAPDFWDDNEKAQKIISQLNLAKETYSTIHALEEGVADIEVALELYDESEDADILAEAE 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
            +V  ++ ++   E      LL     D  + ILEI  G GG+E+  +   L RMY+R+A
Sbjct: 61  GQVAQVQADLDAYE----MKLLLSGPHDANNAILEIHPGAGGTESQDWGSMLLRMYQRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + +KV VL   D ++ G K +   I G   +  +K E GVHR+ R+   +++ R HTS
Sbjct: 117 DKQGFKVTVLDYQDGEEAGIKSVTLEIEGHNAYGYLKSEKGVHRLVRISPFDSNSRRHTS 176

Query: 201 AATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            A+V V P     I++DI  +D+RIDT RASG+GGQH+N T SA+RITHIPTGI+  + S
Sbjct: 177 FASVEVTPMLDDTIEIDINPDDLRIDTYRASGAGGQHINKTSSAIRITHIPTGIVTQSQS 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           ++SQ QNR  AM +L+A+LY +E +  A E +A +  Q        +IR+Y F     + 
Sbjct: 237 QRSQFQNRDLAMAMLKAKLYQLEEENKAKELAALKGEQ-KDIAWGSQIRSYVFHPYAMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  +     V+ G ++  I+  L   
Sbjct: 296 DHRTSYEVGNTGAVMDGDLNGFIDAYLKWQ 325


>gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
 gi|189040003|sp|A8M3R1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
          Length = 373

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 102/353 (28%), Positives = 161/353 (45%), Gaps = 10/353 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++   K R  E     S     D   +  +  + +S +  +I+     +    D  
Sbjct: 24  LDIDRLRADKARLEE---AASAPDLWDDQARAQQVTSQLSYVNGEITKLTDLRSRLDDTQ 80

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++    ++S+   L ++            E  +    L     D +  ++ IRAG GG 
Sbjct: 81  VLLELAEAESDPGVLTEVAAEITGLAKSIDE--MEVRTLLSGEYDSREALVAIRAGAGGV 138

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA F   L RMY R+A    +  EV  +S  ++ G K    T+     +  +  ESG H
Sbjct: 139 DAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTH 198

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +  GR  TS A V VLP       +DIP  ++R D  R+SG GGQ VNTTDS
Sbjct: 199 RLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRTDVYRSSGPGGQSVNTTDS 258

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITHIPTGI+V   +EKSQ QN+  A++VL+ARL + +R+    +    +    GS  
Sbjct: 259 AVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERKRQEEQAKLQGLKTDAAGS-- 316

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
             +++R+Y     + + D R          V  G +D  I   +   + + + 
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTEQETGSPSSVFDGELDAFIEAGIRWRKQQQLS 369


>gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
 gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
          Length = 325

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 102/330 (30%), Positives = 182/330 (55%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVEILLDFLAEDESVHDELVEQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  ++K +   E      LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  LTELDKMMTSYE----MTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTG +V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|325916711|ref|ZP_08178968.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537060|gb|EGD08799.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 329

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 108/324 (33%), Positives = 160/324 (49%), Gaps = 12/324 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L  E + +   +  I+       +  +L  +  D   D +       ++   
Sbjct: 3   NDAERAQALGRERSMLEKTVIGIADVLAGLTDAGELLDLA-DSEQDEDTAVAVIADLDKY 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           +  + +LE +           D  +  ++I+AG GG+EA  +   L RMY R+A  R WK
Sbjct: 62  QAHVEKLEFQRM----FSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  S  +  G K     I G   +  +K E GVHR+ R    ++  R HTS  +V V
Sbjct: 118 TELMEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFV 177

Query: 207 LPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE    I++DI   D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQ
Sbjct: 178 SPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQ 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           NR  AMK+L A+LY++E ++   ER A    K  IG G    +IR Y   Q RI D R  
Sbjct: 238 NRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
           +     + VL G +D+ +   L A
Sbjct: 295 IERSDTQKVLDGDLDEFVEASLKA 318


>gi|156389000|ref|XP_001634780.1| predicted protein [Nematostella vectensis]
 gi|156221867|gb|EDO42717.1| predicted protein [Nematostella vectensis]
          Length = 273

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 144/261 (55%), Positives = 193/261 (73%), Gaps = 3/261 (1%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
              L+PKD  D+   ILE+RAGTGG EA+LF  ++F MY+R+AA +KWK ++L  + +D 
Sbjct: 2   MKALIPKDEADENDAILEVRAGTGGQEASLFASEMFIMYQRFAAFKKWKFDILDIARSDT 61

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           GGYKE  A+ISG GVF +MKFE GVHRVQRVP TEA GRVHTS  TVAVLP+  E+DV I
Sbjct: 62  GGYKEASASISGYGVFGKMKFEVGVHRVQRVPVTEAQGRVHTSTMTVAVLPQPQEVDVII 121

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              D++IDT RASG+GGQHVNTTDSAVRITHIP+G++V +  E+SQ +N+ +AM+VLRAR
Sbjct: 122 SPNDLKIDTFRASGAGGQHVNTTDSAVRITHIPSGMVVSSQEERSQFKNKAKAMQVLRAR 181

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY- 335
           LYD++R+   + R   R+ QIG+ +RSE+IRTYNF QGR+TDHRI +T + ++  L+G  
Sbjct: 182 LYDLQRQEADSARVHARRTQIGTAERSEKIRTYNFPQGRVTDHRIGMTSHTVDKFLEGGV 241

Query: 336 -IDDIINPLLTAHQAKMIGSA 355
            ++D+I+ L    +   +   
Sbjct: 242 LLEDMIDALRVQDERDALKEL 262


>gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
 gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
          Length = 372

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 119/336 (35%), Positives = 177/336 (52%), Gaps = 16/336 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           K R  EIE  +S+  + D    LT    E + +   ++        K + ++   +  + 
Sbjct: 31  KERLEEIEHDLSKPGAWDKPDALTPVLREKSMLEEKVTSYDNLTSSKDDVEEWLMMASED 90

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
                +  L+        +++ +L  +     L    +D  + ILEI  G GG E+  + 
Sbjct: 91  QDQEILEALS-----ENVEKLAKLVEQTELAALLSGPEDKSTAILEIHPGAGGIESQDWA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  R WK   L    +D+ G K +   I G   +  +K E+G+HR+ R+ 
Sbjct: 146 EMLLRMYLRWADKRNWKTSYLDYQPDDEAGIKSVTLRIEGLYAYGFLKGEAGIHRLIRIS 205

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +ASGR HTS A+V V PE + +I++++  EDIR+D  RASG GGQHVN T+SAVRITH
Sbjct: 206 PFDASGRRHTSFASVDVYPEISQDIEIEVKDEDIRLDVFRASGPGGQHVNKTNSAVRITH 265

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSER 305
           +PT I+V   +EKSQ +N+  AMKVL++RLY+ E KR    + A+   K  IG G    +
Sbjct: 266 LPTNIVVQCQNEKSQLKNKETAMKVLKSRLYEQELKRQEESKRADYATKDSIGFG---SQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDII 340
           IRTY     R + DHR       +E VL G +D +I
Sbjct: 323 IRTYTLQPYRLVKDHRCGAEDGNVEAVLDGELDGLI 358


>gi|313679114|ref|YP_004056853.1| bacterial peptide chain release factor 2 (brf-2) [Oceanithermus
           profundus DSM 14977]
 gi|313151829|gb|ADR35680.1| bacterial peptide chain release factor 2 (bRF-2) [Oceanithermus
           profundus DSM 14977]
          Length = 370

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 114/355 (32%), Positives = 181/355 (50%), Gaps = 15/355 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   K R  E+E  + +    D      KLT+E A +  ++     Y+Q   + + L  
Sbjct: 18  DIAGKKARLEELEKELGQEGLWDDPAAAQKLTQEAARLKKVVE---EYEQLSGDLESLIE 74

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + +   E R+  + E+    K++ +L     +  L      +K+ IL I+ G GG+E
Sbjct: 75  LWDEAS--PEERESLEPELEEAAKKLEDL----YHQTLLGFEHAEKNAILTIKPGAGGTE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A    +KVE++  +   + G       + G   +  +  E GVHR
Sbjct: 129 AMDWAEMLLRMYTRWAERHGFKVELVDVTPGPEAGIDSAELIVRGENAYGLLSAERGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +++GR HTS A+V V PE  +  +++I  ED+RID  RA G GGQ VNTTDSA
Sbjct: 189 LVRPSPFDSTGRRHTSFASVEVSPEVDDTVEIEIKPEDLRIDVFRAQGHGGQGVNTTDSA 248

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI H+PTGI+V + + +SQH+N+  AMKVL++RL++ E ++   E +  R  Q    + 
Sbjct: 249 VRIVHLPTGIIVTSQATRSQHKNKELAMKVLKSRLFEREWQKRQEEMAKLRGEQKA-IEW 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
             +IR+Y   +  + DHR  L  +  + VL G +DD+I   L            E
Sbjct: 308 GSQIRSYVLDKQYVKDHRTGLMRHDPDKVLDGDLDDLIWAGLEWRAGLRQAEPHE 362


>gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
 gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
          Length = 329

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 183/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D  
Sbjct: 2   ENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             +      E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VAQ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+T+IPTGI+V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745]
 gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus
           pentosaceus ATCC 25745]
          Length = 343

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 105/336 (31%), Positives = 172/336 (51%), Gaps = 10/336 (2%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    D   +        + +  K   +       ++L         + +     
Sbjct: 9   EAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMEDDP--DV 66

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q E  +      +L  +    LL     D  + I+EI  G GG+E+  +   L RMY R+
Sbjct: 67  QSEFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLLRMYTRW 126

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A   ++KV++      +  G   +   I G   +  ++ E GVHR+ R+   +++GR HT
Sbjct: 127 AEQHQFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHT 186

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE    ++V+I  +D+R+D  R+SG+GGQH+N T SAVRITH+PTGI+V + 
Sbjct: 187 SFASVDVMPELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVVASQ 246

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR  AM +L+A+L+++E ++ A E++    +Q  IG G    +IR+Y F    
Sbjct: 247 AERSQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWG---SQIRSYVFHPYS 303

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            + DHR N     ++ V+ G  DD IN  L     +
Sbjct: 304 MVKDHRSNFETANVQGVMDGDFDDFINAYLQWKLKE 339


>gi|89055024|ref|YP_510475.1| peptide chain release factor 2 [Jannaschia sp. CCS1]
 gi|88864573|gb|ABD55450.1| bacterial peptide chain release factor 2 (bRF-2) [Jannaschia sp.
           CCS1]
          Length = 375

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 111/335 (33%), Positives = 168/335 (50%), Gaps = 5/335 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    +   K  +       ++ K+  Y+  +Q   D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWNDPEKAQKLMRDRQVLVDKMKQYETIRQGVDDNAELIELGEMEDD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +A+ E                   L     D     LEI +G GG+E+  +   L R
Sbjct: 91  AEVVAEAEAALTALVDEA--AAKELEALLDGEADSNDTFLEINSGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + + V++ S S  ++ G K  V  ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYTRWAEKQGYDVDLQSFSAGEEAGIKSAVYKISGHNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHHPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  + + + +   +   G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQMELDKRSAKVNEVHENA-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + + D R        + VL G ID ++  +L   
Sbjct: 328 YQMVKDLRTAFETSDTQGVLDGNIDGLMASVLAMD 362


>gi|126311212|ref|XP_001381267.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Monodelphis domestica]
          Length = 567

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 138/303 (45%), Positives = 202/303 (66%), Gaps = 5/303 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +        +K+QE Q++  ++ D N D  +R LA+ E+++ +KE+ +L+ +I  LL+P
Sbjct: 66  ELAMAARKLREKEQELQEIERLLEDENED--LRKLAENEIISCQKELTKLKQKIILLLIP 123

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY+RYA  +KW  E+L    ++ GG +  
Sbjct: 124 SEETDENDLILELTAGVGGQEAMLFTAEMFDMYQRYATYKKWHFEILEYFPSEIGGLRHA 183

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +++R
Sbjct: 184 SASIGGPEAYRHMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAILPQPTEINLVINPKELR 243

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           I+T RASG+GGQHVNTTDSAVRI H+PTG+      E+SQ +N+  AMK LRA+LY +  
Sbjct: 244 IETKRASGAGGQHVNTTDSAVRIVHLPTGVATECQQERSQIKNKEMAMKKLRAKLYSMLL 303

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R + RK+QIG+  RSE+IRTY+F Q R+TDHRI+ +LY ++  + G   +D++I
Sbjct: 304 EEETNKRYSARKIQIGTKGRSEKIRTYHFPQNRVTDHRISKSLYDIQSFMLGEYLLDELI 363

Query: 341 NPL 343
             L
Sbjct: 364 QSL 366


>gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31]
 gi|189039999|sp|B0SXB7|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31]
          Length = 367

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 170/346 (49%), Gaps = 16/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                +  E+  R+ +    D       ++ + A+++  +  +   +   ++  +   + 
Sbjct: 23  DAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLKDALEYAELA 82

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                ++ + D       A  K++++         L     D   C +EI +G GG+E+ 
Sbjct: 83  DMEGDEALLEDAR-----AQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGGTESC 137

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L RMY R+A   K  VE++  +  D  G K     + G   +  +K E+GVHR+ 
Sbjct: 138 DWAGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGVHRLV 197

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+  V P     I++DI   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 198 RISPYDAAAKRHTSFASAWVYPVVDDTIEIDINPSDVRTDTYRASGAGGQHINKTDSAVR 257

Query: 246 ITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +THIPTGI +   + +SQHQNR  A K+LRARLY+ E +R    +    ++K  IG G  
Sbjct: 258 LTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIGWG-- 315

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y     + + D R N+     + VL G +D  +   L   
Sbjct: 316 -HQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLAQR 360


>gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
 gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
          Length = 369

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 157/346 (45%), Gaps = 8/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDKLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETLRGRIDDLAVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 +   LA+ E           E  +    L      ++  ++ IRA  GG +A+ 
Sbjct: 85  LAQEMDDADTLAEAENELTSVRKALDE--MEVRTLLSGEYAEREALVNIRAEAGGVDASD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +  EV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 143 FAERLQRMYLRWAERHGYPTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP   +   V+I   ++RID  RASG GGQ VNTTDSAVRI
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVESSDHVEIDEGELRIDVYRASGPGGQGVNTTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G      +
Sbjct: 263 THLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKD---GGSSWGNQ 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +   + VL G ID  +   +   + +
Sbjct: 320 MRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRKQQ 365


>gi|212702489|ref|ZP_03310617.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
 gi|212674150|gb|EEB34633.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
          Length = 366

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 179/347 (51%), Gaps = 16/347 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           + R A IE  +S   + D    LT    E   +   +++++       +  +   +  + 
Sbjct: 27  EQRLAAIETELSRPNAWDNPEALTPLLREKRQLEDEVARLNALKTCHDDMHEWLELAVES 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D  +  LA       +  +  L +E   ++L    +D++  ILEI  G GG+E+  + 
Sbjct: 87  GEDEALESLA-----KQQDSLDALLDETELVMLLSGEEDNQDAILEIHPGAGGTESQDWA 141

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+AA R + VE L     D+ G K +   ISG   F  +K E G+HR+ R+ 
Sbjct: 142 EMLLRMYTRWAARRHFTVEELDYLPGDEAGIKSVTLRISGPHAFGFLKSERGIHRLIRIS 201

Query: 190 ATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +ASGR HTS A+V V+P+   +I +DI   D+R DT R+SG GGQ VNTT SAVR+TH
Sbjct: 202 PFDASGRRHTSFASVDVMPDVGDDIQLDIKETDLRFDTFRSSGPGGQSVNTTSSAVRVTH 261

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
           IPTGI     +EKSQH N+  A+ +L+ARLY++E ++   ER+A    K  I  G    +
Sbjct: 262 IPTGISAQCQNEKSQHHNKEAALCILKARLYNLELQKREAERAAQYAGKDAIAFG---SQ 318

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           IRTY     R + DHR N     +E VL G ID   +  L     + 
Sbjct: 319 IRTYTLQPYRLVKDHRTNSECGDVEAVLDGQIDQFQHDYLLYRHEQQ 365


>gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
 gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
          Length = 323

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 162/326 (49%), Gaps = 9/326 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-DHNSDSEIRDLAQI 81
           M E+   D   K  E       +  KI  +    +   D+  +      +D E       
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAQEIIS 60

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           EV A+ KEI  L        +     D    IL +  G GGS+A  +   L RMY R+  
Sbjct: 61  EVKALSKEIDTL----KIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCE 116

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            + + +E +     D+ G K +   + G   +  +K E G+HR+ R+    A+G+  TS 
Sbjct: 117 KKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 176

Query: 202 ATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T+SAVRITHIPTGI+V   +E
Sbjct: 177 ASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQ  NR  AM +L+++L +++ +R   E+  +   ++       +IR+Y F     + D
Sbjct: 237 RSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLL 344
           HR N     +  V+ G ID+ I   L
Sbjct: 296 HRTNFETSNVNGVMDGDIDNFIIAYL 321


>gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6]
 gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
 gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
 gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
 gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6]
 gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
 gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
 gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
          Length = 329

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 183/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D  
Sbjct: 2   ENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             +      E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VAQ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHT 177

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS 258
           S  +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+T+IPTGI+V S+
Sbjct: 178 SFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQST 237

Query: 259 -EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG- 314
            +++Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+   
Sbjct: 238 VDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYT 294

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +  + +++ V+ G +D  I+  L   
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
 gi|149834234|gb|EDM89314.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
          Length = 335

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 175/327 (53%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D      ++   +  +   + IY   + + +D+ T+I     +++   + +I+
Sbjct: 1   MEAPDFWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYEENDPEIIPEIQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
            +  E +       +  LL  +   +  + I+++ AG GG+EA  + G L+RMY R+   
Sbjct: 61  EMLDEFQKNFDSIRVKTLLSGEYDSE--NAIIKLNAGAGGTEACDWCGMLYRMYSRWVDR 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +EVL   D D+ G K +   ++G   +  +K E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGFTMEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+  +  DV+I  +DIRIDT R+SG+GGQH+N T SA+RITH PTGI+V   +E+
Sbjct: 179 SCDVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+ +AM++L+A+LY ++++    + S  R  ++       +IR+Y       + DH
Sbjct: 239 SQHMNKDKAMQMLKAKLYLLKQQEAEAKLSGIR-GEVTDIGWGNQIRSYVMQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R +     ++ VL G ID  IN  L  
Sbjct: 298 RTSEETGNVDAVLDGDIDPFINAYLKW 324


>gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           bromii L2-63]
          Length = 372

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 177/340 (52%), Gaps = 6/340 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  + +   ++EL+ +E    D   K  +       +  K+  Y+    + +D H +I  
Sbjct: 27  MKGMLSEIQQLELKATEPGFWDDVEKSQKVLQRTGSLKGKVEAYEGLVAKYEDTHALIEL 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N   E   L +     +E     LE +    LL  + D   + IL   AG+GG+EA  +
Sbjct: 87  ANE-EEDESLLEEAESEVEAVKENLEKQRLQTLLTGEYDK-NNAILTFHAGSGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY R+A    +KV+ +   D D+ G K  V  + G   +  +K E+GVHR+ RV
Sbjct: 145 AEMLYRMYTRWAEAHGFKVKEVDYLDGDEAGLKSAVLLVEGENAYGYLKSEAGVHRLVRV 204

Query: 189 PATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++GR HTS +++ V+PE   + +V IP EDI++D  RASG+GGQ VN T SAVR+T
Sbjct: 205 SPFDSAGRRHTSFSSLEVMPEIAKDTEVHIPPEDIKMDVYRASGAGGQKVNKTSSAVRLT 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTGI+V +  E+SQ+QNR  AM +L ++L +++ +    +    + +Q        +I
Sbjct: 265 HIPTGIVVASQVERSQYQNRDVAMNMLISKLVEIKEREHLEKIEDIKGVQ-KEITWGSQI 323

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y F     + DHR       ++ V+ G +D  IN  L 
Sbjct: 324 RSYVFMPYTMVKDHRTGFETGNIQAVMDGDLDGFINAYLK 363


>gi|224373403|ref|YP_002607775.1| peptide chain release factor 2 [Nautilia profundicola AmH]
 gi|254790918|sp|B9L5Y7|RF2_NAUPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|223589806|gb|ACM93542.1| peptide chain release factor 2 [Nautilia profundicola AmH]
          Length = 367

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 189/343 (55%), Gaps = 8/343 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ R  EIE   +     +      +     + I+ K+  Y + K   QD   +    
Sbjct: 27  EKLEARLKEIEELENSPDFWNDPKTSAKVQKEKNAILRKLEKYKKAKTALQDNKDMFELA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           + + +  +    EV    ++++++  ++   ++  D +D K+ I+ I  G GG+E+  + 
Sbjct: 87  SMEED--EETLNEVFNDVQDLKKIIRDLEIEVMLSDENDAKNAIISIHPGAGGTESHDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  R WKVEVL     D+ G K++   + G   +  +K E+G+HR+ RV 
Sbjct: 145 SILYRMYLRYAERRGWKVEVLDYQAGDEAGIKDVSFLVKGENAYGYLKAENGIHRLVRVS 204

Query: 190 ATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++ GR HTS A+V V PE  +         DIRID  RASG+GGQHVN T+SAVRITH
Sbjct: 205 PFDSGGRRHTSFASVQVSPEIDDDIEIEIDPKDIRIDVFRASGAGGQHVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +++SQH+N+  AMK+L+++LY++E ++   E     K ++G G    +IR
Sbjct: 265 IPTGIVVGCQTDRSQHKNKDMAMKMLKSKLYELELEKRKAEEEGKPKDEMGWG---HQIR 321

Query: 308 TYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +Y  F   ++ D+R N    +++ +L G +D++I  +L A + 
Sbjct: 322 SYVLFPYQQVKDNRSNKAYSRVDDILDGDLDEVIEDVLIAEKE 364


>gi|224282580|ref|ZP_03645902.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287040|ref|YP_003938298.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
           bifidum S17]
 gi|311063912|ref|YP_003970637.1| peptide chain release factor 2 (RF-2) PrfB [Bifidobacterium bifidum
           PRL2010]
 gi|313139738|ref|ZP_07801931.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
 gi|309250976|gb|ADO52724.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
           bifidum S17]
 gi|310866231|gb|ADP35600.1| PrfB Bacterial Peptide Chain Release Factor 2 (RF-2)
           [Bifidobacterium bifidum PRL2010]
 gi|313132248|gb|EFR49865.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 375

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 101/353 (28%), Positives = 170/353 (48%), Gaps = 7/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  LK++ A +E   ++    D      +  + +S   +++   ++  +  +D+ T++ 
Sbjct: 25  DIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLSAAQAQLKRLNEANRRIEDVETLVE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +++   L++ +            +++    L     D++S ++ IR+G GG +AA 
Sbjct: 85  LAQEEADADSLSEAQSEIGSIAQEL--DDMEIQTLLDGEYDERSAVVTIRSGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY RY     +K +V+ +S  ++ G K     +     + R+  E G HR+ R
Sbjct: 143 FAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P   A   +DIP  DIR+DT  +SG GGQ VNTT SAVRI
Sbjct: 203 ISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    ++
Sbjct: 263 THLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WGDQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +R+Y     + + D R      + + V  G ID  I   +     +   +A E
Sbjct: 321 MRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAGIRWRHEQRRQAAEE 373


>gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321]
 gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321]
          Length = 325

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + +    +
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHEELVEQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|254461473|ref|ZP_05074889.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2083]
 gi|206678062|gb|EDZ42549.1| peptide chain release factor 2 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 375

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 171/345 (49%), Gaps = 5/345 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    +      +       ++  +  Y   KQE  D   +I     + +
Sbjct: 31  RLEEFNARVEDPDLWNDPDAAQKLMQERQALVDAMGTYTSIKQELSDQVEMIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             +    E       + +L        L     D     LEI +G GG+E+  +   L R
Sbjct: 91  --EDVVTEAEEALNALAKLAAAKELEALLDGEADSNDTFLEINSGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  R +KVE+ S S  ++ G K     ISG+  +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKRGYKVELQSESAGEEAGIKSAAYKISGQNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHAPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  + +   +   +   G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHENA-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            + + D R N      + VL G +D  +   L  + A    + ++
Sbjct: 328 YQMVKDLRTNHETSDTKGVLDGDLDGFMGATLAMNVAGKSRAEAQ 372


>gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
 gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
          Length = 365

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 191/345 (55%), Gaps = 10/345 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             LK R  EIE    +    +   +  E     S I   ++ Y   K    D   +    
Sbjct: 27  DTLKERLCEIEKLQQDPNFWNDAKRAGEIGKEKSKIERMLATYQNAKNSIDDARELFEIS 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D++  +L   E   +E+EI+++E E+          D  + I+ I+ G GG+E+  + 
Sbjct: 87  ANDTDTLELLFAESQNLEQEIKKVEIEVM----LSGEHDGANAIVTIQPGAGGTESQDWG 142

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+   R +K E+L   D ++ G K +   + G   +  MK ESGVHR+ R  
Sbjct: 143 SILYRMYLRWCERRGFKAEILDYQDGEEAGIKGVAFLVKGENAYGYMKTESGVHRLVRNS 202

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V PE    I++DI  +D+RIDT RASG+GGQH+N T+SA+RITH
Sbjct: 203 PFDANTKRHTSFASVQVSPELDDNIEIDIEEKDLRIDTYRASGAGGQHINKTESAIRITH 262

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +++SQH+N+  A+K+L+++LY++ER++  +  +   K +IG G    +IR
Sbjct: 263 LPTGIVVQCQNDRSQHKNKASALKMLQSKLYELEREKQNSSVATQEKSEIGWG---HQIR 319

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +Y  S   ++ D+R N+    +E +L G ID II  +L +   + 
Sbjct: 320 SYVLSPYQQVKDNRSNIAYSNVEAILDGDIDSIIEGVLISKTKEK 364


>gi|221128345|ref|XP_002163029.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 400

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 227/353 (64%), Gaps = 11/353 (3%)

Query: 9   ICDLKNRFAEIELRMSESPS--VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           I D+  ++ ++  ++ +S +         + E   + P +   ++  +K++E  +L  + 
Sbjct: 43  IEDVMFKYKQLNEKLLDSKNLTPTEIKNYSSECHRMKPAVEIYNLLLKKREEIIELAALG 102

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D+    E+++  Q E+ A +  I +LE  +   ++PKD DD  + I+EIRAGTGG EAA
Sbjct: 103 IDN---KEMKEFVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGTGGREAA 159

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           +F  ++  MY++Y++  +WK EVL  S++ DGG KE+   I G GVF ++K E GVHRVQ
Sbjct: 160 IFAAEMLSMYDKYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEIGVHRVQ 219

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TE+ GRVHTS  TVAVLP+   IDV + ++D+++DT R+SG+GGQHVNTTDSAVR+
Sbjct: 220 RVPITESLGRVHTSTVTVAVLPQPESIDVVLNMKDVKVDTFRSSGAGGQHVNTTDSAVRL 279

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIP+G++V   S++SQ +N+ RA+K+L A+LYD ER R+  ER   R+ QIGSG RSER
Sbjct: 280 THIPSGLVVAVQSQRSQIENKSRALKILSAQLYDFERTRVVQERVELRRTQIGSGHRSER 339

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSAS 356
           IRTYNF Q RITDHRI  TL  L   + G      +++ L +    + + S  
Sbjct: 340 IRTYNFPQDRITDHRIGETLSGLSDFMLGGSTFHKLVDMLRSH---EKLLSLG 389


>gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
           49540]
 gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
           49540]
          Length = 356

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 113/361 (31%), Positives = 176/361 (48%), Gaps = 20/361 (5%)

Query: 3   FLS----HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYA---AISPIISKISIYDQK 55
            L        +  L    AE E +M+E    D  +   +       +             
Sbjct: 1   MLPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVKLRDN 60

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
               Q    ++     D    +  +       +  +ELE      LL  + D  K+ ILE
Sbjct: 61  IGNLQTSIELLELEPDDELQSEFEKSF----GETQKELEQYRLNQLLDGEYDA-KNAILE 115

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           I  G GG+EA  +   L RMY R+     + VE  S    ++ G K +   I G   F  
Sbjct: 116 IHPGAGGTEAQDWGAMLLRMYVRWGEQHGFNVETASYEAGEEAGIKSVTLLIKGHNAFGY 175

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGG 234
           ++ E GVHR+ R+   +A+GR HTS A+V V+PE    +++DI   D+R+DT R+SG+GG
Sbjct: 176 LRSEKGVHRLVRISPFDAAGRRHTSFASVDVMPELDESVNIDIDPSDLRVDTFRSSGAGG 235

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QH+N T+SAVRITHIPTGI+  + +E+SQ QNR+ AM +L+++LY++E ++ A +R+   
Sbjct: 236 QHINKTESAVRITHIPTGIVTSSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIE 295

Query: 294 KLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             Q  IG G    +IR+Y F     + D+R     +  + V+ G +D  IN  L    ++
Sbjct: 296 GEQLEIGWG---SQIRSYVFHPYTLVKDNRSGHETHNGQAVMDGDLDPFINAYLQWKLSQ 352

Query: 351 M 351
            
Sbjct: 353 K 353


>gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
 gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
          Length = 338

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 174/344 (50%), Gaps = 16/344 (4%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-DHNSDSEI 75
            E++ R S +   D      +  +  + +   ++ +   ++E  +   ++     SDSE 
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVADESDSEF 61

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            D           ++    ++     +     D   C L IR G GG+E+  +   L RM
Sbjct: 62  LDGLWSA----LTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRM 117

Query: 136 YERYA-ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           Y R+A     +  E++   D +  G K +   ISG G +   K ESGVHR+ R+   ++S
Sbjct: 118 YVRWAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSS 177

Query: 195 GRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS A+V V P    +ID++I  +D+RIDT RASG+GGQHVN T+SAVRITH+P+GI
Sbjct: 178 SRRHTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGI 237

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYN 310
           +V   + +SQHQNR  A  +LR+RLY++E +    + +   + +  IG G    +IR+Y 
Sbjct: 238 VVQCQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWG---HQIRSYV 294

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH--QAKM 351
               R + D R       ++ VL G +D  I   LT    QA+ 
Sbjct: 295 MHPYRMVKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLSQAQK 338


>gi|157164977|ref|YP_001467027.1| peptide chain release factor 2 [Campylobacter concisus 13826]
 gi|166223623|sp|A7ZE19|RF2_CAMC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|112800036|gb|EAT97380.1| peptide chain release factor 2 [Campylobacter concisus 13826]
          Length = 366

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 189/347 (54%), Gaps = 14/347 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            D+K R  EIE    +        +   L +E   IS +++K S  +Q   + ++L  + 
Sbjct: 27  DDIKARLKEIEAIEQDPDFWQDIARAGALNKEKTKISNMLAKFSDANQAVSDAKELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N +          +    K + E    +   +L    DD K+ I+ I  G GG+E+ 
Sbjct: 87  NSENDEE-----TINSLFEDAKNLDEKIVNLEISMLLSGEDDGKNAIVSIHPGAGGTESN 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+     +KVE L   + ++ G K++   + G   +   K E+G+HR+ 
Sbjct: 142 DWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGENAYGYFKAENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++GR HTS ++V V PE   +I+++I  +D++IDT RASG+GGQHVN T+SA+R
Sbjct: 202 RTSPFDSAGRRHTSFSSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+V   +++SQH+NR  AMK+L++RLY++E  +     ++  K +IG G    
Sbjct: 262 ITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVEKSEIGWG---H 318

Query: 305 RIRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +IR+Y  F   ++ D+R      + + +L G I  +I  +L A +A+
Sbjct: 319 QIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKMIEGVLIAQKAE 365


>gi|21909990|ref|NP_664258.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS315]
 gi|21904179|gb|AAM79061.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           MGAS315]
          Length = 326

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 181/333 (54%), Gaps = 12/333 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ +  K   +   ++   +   ++   + D  +++  +  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDFLKEELEEN 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           ++     + ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LMQ----LDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS A
Sbjct: 117 NGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFA 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V+S+ ++
Sbjct: 177 SVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           DHR N  L +++ V+ G I+  I+  L      
Sbjct: 294 DHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 326


>gi|145225030|ref|YP_001135708.1| peptide chain release factor 2 [Mycobacterium gilvum PYR-GCK]
 gi|189040001|sp|A4TDE5|RF2_MYCGI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|145217516|gb|ABP46920.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
           gilvum PYR-GCK]
          Length = 372

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 162/348 (46%), Gaps = 10/348 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL---HTV 65
           +  L+ R  ++E   S+    D   +  +  + +S   +++   ++ +    DL   + +
Sbjct: 25  VDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEELRSRLDDLPVLYEL 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +          A+ +    +         +    L     D++  ++ IR+G GG +A
Sbjct: 85  AAEEEGAGSSEAFAEADAELAKLREDI--AGMEVRTLLSGEYDEREALVNIRSGAGGVDA 142

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A +   L RMY R+A    + VEV  +S  ++ G K     +     +  +  E G HR+
Sbjct: 143 ADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLSVEQGTHRL 202

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAV
Sbjct: 203 VRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAV 262

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K   GS    
Sbjct: 263 RLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDAL-KGDGGS-SWG 320

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 321 NQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWRNQK 368


>gi|315445399|ref|YP_004078278.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           Spyr1]
 gi|315263702|gb|ADU00444.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           Spyr1]
          Length = 372

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 162/349 (46%), Gaps = 10/349 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL---HT 64
            +  L+ R  ++E   S+    D   +  +  + +S   +++   ++ +    DL   + 
Sbjct: 24  DVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEELRSRLDDLPVLYE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +          A+ +    +         +    L     D++  ++ IR+G GG +
Sbjct: 84  LAAEEEGAGSSEAFAEADAELAKLREDI--AGMEVRTLLSGEYDEREALVNIRSGAGGVD 141

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA +   L RMY R+A    + VEV  +S  ++ G K     +     +  +  E G HR
Sbjct: 142 AADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLSVEQGTHR 201

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSA
Sbjct: 202 LVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSA 261

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K   GS   
Sbjct: 262 VRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDAL-KGDGGS-SW 319

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             ++R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 320 GNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWRNQK 368


>gi|332522300|ref|ZP_08398552.1| peptide chain release factor 2 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313564|gb|EGJ26549.1| peptide chain release factor 2 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 327

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 105/330 (31%), Positives = 179/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ +  K   +   +   ++    +     D  ++     E
Sbjct: 1   MTEPDFWNDTISAQKTSQELNELKVKFDTFHNMENLSEETELYMEMLEEDESVK----GE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +     ++ ++       LL  +  D  + ILEI  G+GG+EA  +   LFRMY R+   
Sbjct: 57  LEESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVETLDYQAGDEAGIKSVTLSFQGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V+S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N  + +++ V+ G ID  I+  L   
Sbjct: 294 DHRTNFEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|15639564|ref|NP_219014.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025803|ref|YP_001933575.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           SS14]
 gi|6093958|sp|O83585|RF2_TREPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3322871|gb|AAC65552.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018378|gb|ACD70996.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059953|gb|ADD72688.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 368

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 106/342 (30%), Positives = 167/342 (48%), Gaps = 11/342 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   + R A +E   +         +     A +  + + +  +   ++E  DL  +  
Sbjct: 20  DVAAYEARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALRRESADLRALYE 79

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 +     ++  L  +   R  E  +  LL  +   D     + I +G GG EA  
Sbjct: 80  LAREAQDASLEPELSSLFSDISARFEEASLTRLLHEEV--DRLDAFVTIHSGAGGVEACD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  R + V ++   +++ GG K +   I G   F  +K E+GVHR+ R
Sbjct: 138 WAQMLMRMYTRWAERRSFCVHIVDLLESE-GGVKSVTLKICGSHAFGFLKGETGVHRLVR 196

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS  +  V P     ++V I  ED+R+DT R+ G+GGQHVN TDSAVRI
Sbjct: 197 ISPFDSAARRHTSFTSTYVFPVLDDHVEVHIRSEDMRVDTYRSGGAGGQHVNKTDSAVRI 256

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRS 303
           TH+PTGI+V   +E+SQ  NR  A+ +LRARLY  ER++   E  R A+ K  I  G+  
Sbjct: 257 THLPTGIVVTCQNERSQISNRATALSLLRARLYAYERQKKQQEHQRFASEKKDISWGN-- 314

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            +IR+Y F     + DHR       +  V+ G ++  I   L
Sbjct: 315 -QIRSYVFHPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYL 355


>gi|222823300|ref|YP_002574873.1| peptide chain release factor 2 [Campylobacter lari RM2100]
 gi|254790909|sp|B9KEY7|RF2_CAMLR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|222538521|gb|ACM63622.1| peptide chain release factor 2 [Campylobacter lari RM2100]
          Length = 366

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 186/344 (54%), Gaps = 8/344 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++K R  EIE   +         +        + I + +  Y+       D   +    
Sbjct: 27  EEIKARLKEIENLENSPSFWSDVKQAGIIGKEKTKISNLLKNYENAFNALNDASELFDLA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           NS++++       +      + +L   +   +L    +D K+ I+ I  G GG+E+  + 
Sbjct: 87  NSENDL--DTIQALFDDAPNLEDLIVSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R  
Sbjct: 145 SMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTS 204

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++GR HTS ++V V P    +I+++I  +DIRID  RASG+GGQHVN T+SAVRITH
Sbjct: 205 PFDSAGRRHTSFSSVMVSPELDDDIEIEIEDKDIRIDYYRASGAGGQHVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +P+GI+V   +++SQH+N+  A K+L++RLY++E  +  +E +++ K +IG G    +IR
Sbjct: 265 MPSGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDEANSSEKSEIGWG---HQIR 321

Query: 308 TYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y  F   ++ D R N    +++ +L G I  +I  +L A +A+
Sbjct: 322 SYVLFPYQQVKDTRSNEAFSQVDNILDGDIKKMIEGVLIAQKAQ 365


>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
 gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
          Length = 378

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 170/348 (48%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   A++    ++        +  +    +S + ++++     +Q  +D+ T+  
Sbjct: 25  DLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTSLRQRLEDVATLYE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D++ R  A  E+ ++ K+I++LE             D +  ++ I A  GG +A
Sbjct: 85  LAEEMDDADTRAEADAELESLRKDIQQLEVRTLMS----GEYDHREALITINAQAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A +   L RMY R+A    +  E+  +S  ++ G K     +     +  ++ E G HR+
Sbjct: 141 ADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTLRGEHGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A + V+P       V++   D+RID  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGLDVVPVVEQSDHVEVDENDLRIDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V   +E+SQ QN+  AM VL+A+L + +R+  A + +  R    G+    
Sbjct: 261 RITHIPTGIVVSCQNERSQLQNKATAMAVLKAKLLERKRQEEAAKMADLRGE--GTSSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            +IR Y     + + D R  +       VL G ID+ I   +   + +
Sbjct: 319 TQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEIRWLRQR 366


>gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 369

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 159/349 (45%), Gaps = 8/349 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A++E +  +    +      +  + ++    ++   +  ++   DL  +  
Sbjct: 24  DLPALRVEIADLEEQAGQPDLWNDTETAQKVTSRLAHANGELRRVEDLRRRLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   +A  +   +          +    L     D++  ++ IR+  GG +AA 
Sbjct: 84  LAEDEGDESAIADADRDRVALRAEI--ESLEVRTLLSGEYDEREALVTIRSEAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    + V+V  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 142 FAEMLMRMYLRWAERHGYGVDVYDTSYAEEAGIKSATFQVHAPYAYGTLSVEQGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V     +   +DI  +D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 202 ISPFDNQGRRQTSFAGVEVAPVVESTDHIDIDEKDLRVDVYRSSGPGGQGVNTTDSAVRL 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQ QN+  AM VL+A+L + +R+       + +      G+   +
Sbjct: 262 THIPTGIVVSCQNERSQIQNKATAMVVLQAKLLERKRQEERALMDSLKDTGSSWGN---Q 318

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           +R+Y     + + D R +  +     VL G ID  I   +   + +   
Sbjct: 319 MRSYVLHPYQMVKDLRTDFEVGNPGAVLDGDIDGFIEAGIRWRRQQQAE 367


>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
           ATCC 51170]
 gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
           ATCC 51170]
          Length = 369

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 174/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD---LHTVI 66
             L     EIE +  E    D   K  E  A +S        +   K+E +D   L  +I
Sbjct: 28  EKLNTEIKEIEKQTLEENFWDDSQKAQEIMADLSDKKDNFKTFTSFKEELKDQSDLLDII 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N D E  +  +  + +++KEI                 D  +  L I AG GG EA 
Sbjct: 88  EESNEDLESLNEIEEILNSLKKEI----GSFKIKTELDGEYDKNNAYLVIHAGAGGLEAT 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   R +K +V   ++ + GG K     + G   +  +K E GVHR+ 
Sbjct: 144 DWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKSATIHVKGSFAYGYLKGEKGVHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   ++S R HTS A+V + PE   ++ V+I  +D+RIDT RASG+GGQHVN TDSAVR
Sbjct: 204 RISPFDSSKRRHTSFASVDIFPELNDDMSVEIDPKDLRIDTYRASGAGGQHVNKTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDR 302
           ITHIPTG++  + +E+SQ QN+  AMK+L A+L  ++ +    +    +    QI  G+ 
Sbjct: 264 ITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQGNYTQIAWGN- 322

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y F     + DHR N  +  +E V+ G ID  I+  L 
Sbjct: 323 --QIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDEYLA 364


>gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
           OL]
 gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
           OL]
          Length = 372

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 119/353 (33%), Positives = 176/353 (49%), Gaps = 10/353 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I  L+N    +E   S            +    I  +  KI  + +   + +DL
Sbjct: 21  MRVSLDIDRLENELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDL 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +     S  E       E+     ++     +    +L     D  + IL I AG GG
Sbjct: 81  KVLTEL--SLEEGNHDMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY R+AA + +KVE L     ++ G K +   I G   +  +K E GV
Sbjct: 139 TEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A V VLPE   + D++I  ED+ IDT RASG+GGQHVN T+
Sbjct: 199 HRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTE 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRI HIPTGI+V   +E+SQH+NR  A+K+L+A+L +++ K    +    +  Q  IG
Sbjct: 259 SAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIG 318

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            G+   +IR+Y F     + DHR    +  +E V+ G ID  IN  L   + +
Sbjct: 319 WGN---QIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLKKFRNE 368


>gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
           F4969]
 gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
           F4969]
          Length = 323

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 163/326 (50%), Gaps = 9/326 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-DHNSDSEIRDLAQI 81
           M E+   D   K  E       +  KI  +    +   D+  +      +D E       
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKEIIN 60

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           EV A+ KEI  L        +     D    IL +  G GGS+A  +   L RMY R+  
Sbjct: 61  EVKALSKEIDTL----KIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCE 116

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            + + +E +     D+ G K +   + G   +  +K E G+HR+ R+    A+G+  TS 
Sbjct: 117 KKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 176

Query: 202 ATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T+SAVRITHIPTGI+V   +E
Sbjct: 177 ASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQ  NR  AM +L+++L +++ +R   E+  +   ++       +IR+Y F     + D
Sbjct: 237 RSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLL 344
           HR N+    +  V+ G ID+ I   L
Sbjct: 296 HRTNVETSNVNGVMDGDIDNFIIAYL 321


>gi|282865194|ref|ZP_06274247.1| peptide chain release factor 2 [Streptomyces sp. ACTE]
 gi|282560117|gb|EFB65666.1| peptide chain release factor 2 [Streptomyces sp. ACTE]
          Length = 368

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 96/345 (27%), Positives = 159/345 (46%), Gaps = 7/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDALRADIAALEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKTEALRGRIDDLGVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   LA+ E   +       E  +    L     D +  ++ IRA  GG +AA 
Sbjct: 85  LAEDEGDADALAEAEAELVSVRKALDE--MEVRTLLSGEYDAREAVVNIRAEAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K E+  +S  ++ G K    T+     +  +  E G HR+ R
Sbjct: 143 FAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFTVQVPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRL 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    + +A +    G      +
Sbjct: 263 THLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD--GGNSWGNQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +R+Y     + + D R    +   E V  G ID  I   +   + 
Sbjct: 321 MRSYVLHPYQMVKDLRTEFEIGNPEAVFNGEIDGFIEAGIRWRKQ 365


>gi|282903384|ref|ZP_06311275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282596339|gb|EFC01300.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C160]
          Length = 331

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 17/334 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I++       +  +      ++ +        DL
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+R
Sbjct: 61  EQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V 
Sbjct: 176 TSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + DHR N    K++ V+ G +   I   L  
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDVGPFIESYLRQ 326


>gi|257438202|ref|ZP_05613957.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
           A2-165]
 gi|257199279|gb|EEU97563.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
           A2-165]
          Length = 373

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 172/343 (50%), Gaps = 10/343 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   + R  E+E  MS     D      + +  +  +  K++ +++ +    D  T++  
Sbjct: 27  IDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLVM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + + +   + + E           E     + +     D  + IL   AGTGG+EA  +
Sbjct: 87  LDEEYDPDMVPEAEEAVNAVGKAVDEL--QLMTMLNGEYDHSNAILTFHAGTGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY ++A      VEVL   D D+ G K     + G   +  +K E+GVHR+ RV
Sbjct: 145 AEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRV 204

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ R  TS A++ V+PE    I VDI  EDI +   R+SG+GGQH+N T SAVR+ 
Sbjct: 205 SPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVFRSSGAGGQHINKTSSAVRLI 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTG++V   +++SQ QNR  AM++L+A+LY + +++  ++    +  + +I  G    
Sbjct: 265 HKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWG---H 321

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y F     + DHR N     ++ V+ G +D  I   L A
Sbjct: 322 QIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
 gi|156864534|gb|EDO57965.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
          Length = 329

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 106/327 (32%), Positives = 171/327 (52%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M +    D   K T     +  +   +  Y + +Q+  D+ T+I     + +   + +I 
Sbjct: 1   MEQPGFWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEEEGDSSMIEEIG 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
            +    +           LL     D    ++ + AG GG+E+  +   L+RMY R+A  
Sbjct: 61  EMLTAFQKEF--ENYRISLLLSGEFDGYDAVMTLHAGAGGTESCDWTSMLYRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEVL   + D+ G K +   ISG+  +  +K E GVHR+ R+    A+G+  TS A
Sbjct: 119 HGFKVEVLDYLEGDEAGIKSVTIQISGQNAYGYLKSEKGVHRLVRISPFNAAGKRQTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  E  +VDI  +D+RIDT R+SG+GGQH+N T SAVRITHIPTGI+V   +E+
Sbjct: 179 SCDVIPEIEEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+ +AM++L+++LY ++++   ++ S  R  +I       +IR+Y       + DH
Sbjct: 239 SQHMNKDKAMQMLKSKLYLIKKQENLDKISDIR-GEILENGFGSQIRSYVMQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R       +  VL G +D  +N  L  
Sbjct: 298 RTGEESGNVAAVLDGELDGFMNAYLKW 324


>gi|54026461|ref|YP_120703.1| peptide chain release factor 2 [Nocardia farcinica IFM 10152]
 gi|76363350|sp|Q5YR52|RF2_NOCFA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54017969|dbj|BAD59339.1| putative peptide chain release factor 2 [Nocardia farcinica IFM
           10152]
          Length = 372

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I +L+ R  E+E + ++    +         + +S    ++   +  ++  +DL  +  
Sbjct: 24  DIEELRRRIDELEHQAADPDLWNDQDHAQRVTSELSHAQGELRRVEDLRRRLEDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELE-NEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               +      A +E    E+     +   +    L     D +  ++ IR+G GG +AA
Sbjct: 84  LAEGEEGEARTAALEEADAERAALHSDVEAMEVRTLLSGEYDKREALVNIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    + VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 144 DWAEMLMRMYIRWADRHGYPVEVYDTSYAEEAGIKSATFAVKTPYAYGTLSVEMGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V VLP       +++P  +IR+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQGRRQTSFAEVEVLPVVETTDHIEVPETEIRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R+    E  A +  +  S     
Sbjct: 264 ITHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRQEERAEMDALKTNEGAS--WGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R N  +     VL G ID  I   +     +
Sbjct: 322 QMRSYVLHPYQMVKDLRTNYEVNNPSAVLNGDIDGFIESGIRWRMRE 368


>gi|85708766|ref|ZP_01039832.1| protein chain release factor B [Erythrobacter sp. NAP1]
 gi|85690300|gb|EAQ30303.1| protein chain release factor B [Erythrobacter sp. NAP1]
          Length = 375

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 167/342 (48%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    D      K++ E   +   ++ ++    +  +  +   +     
Sbjct: 30  RRLDELNARVQDPTLWDDPKEAQKISREQKQLEDAVNTVNEISAEMGDAVEFIEM----- 84

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            ++E  +    + L   +++    +      L     D     LEI AG GG+E+  +  
Sbjct: 85  GEAEGEESIVNDGLKSLEKLAARADADKVQALLSGEADGNDTYLEIHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            LFRMY R+A  R +KVE +     D  G K     + G   +   K ESGVHR+ R+  
Sbjct: 145 MLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGDNAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ + HTS ++V V P   +         D++IDT RASG+GGQHVNTTDSAVRITH 
Sbjct: 205 YDSAAKRHTSFSSVWVYPVIDDDIDIEINPADLKIDTYRASGAGGQHVNTTDSAVRITHQ 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTGI+V + +++SQH+NR  AM +L+ARL++ E        S     K +IG G    +I
Sbjct: 265 PTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQEKSEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R  +T    + VL G IDD I+  L   
Sbjct: 322 RSYVLQPYQMVKDLRTGVTSSSPDRVLDGDIDDYISAALAQR 363


>gi|254572401|ref|XP_002493310.1| hypothetical protein [Pichia pastoris GS115]
 gi|238033108|emb|CAY71131.1| hypothetical protein PAS_chr3_1249 [Pichia pastoris GS115]
 gi|328352673|emb|CCA39071.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435]
          Length = 405

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 143/356 (40%), Positives = 217/356 (60%), Gaps = 12/356 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           K+   L ++  ++E ++S S     Y   + +Y+ +   +   + + ++ +  ++L  ++
Sbjct: 43  KKASRLSSQLKDLESKLSSSDEFS-YQD-SRDYSLLVSTVETYNEFLRETENVEELQRML 100

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   D  +++  + E+     +++ L +++   LLP     DK CILE+R G GGSEA 
Sbjct: 101 HE---DPSLKEEIESELTQAAPKLKRLTSKLKTKLLPPHEFADKPCILELRPGIGGSEAN 157

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGVHRV 185
           LF  DL  MYE+YA   +W  E++S + +  G G  +    I+  G ++R++FE+GVHRV
Sbjct: 158 LFTEDLLSMYEKYAQHHRWSYEIISRNPHPSGNGLVDAAIVINEPGSYNRLRFEAGVHRV 217

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI----DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           QRVPATE+ GR HTS A V VLP+  E     +     +DIRID MRASGSGGQHVNTT+
Sbjct: 218 QRVPATESKGRTHTSTAAVVVLPKIDEDDTSLNRTFLPDDIRIDVMRASGSGGQHVNTTE 277

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIP+GI+V    E+SQH+N+ +A+ +L+ARL + ER     +  A RK Q+ S 
Sbjct: 278 SAVRVTHIPSGIVVLIQDERSQHKNKAKALTILKARLAEKERVEKEEKELAERKGQVSST 337

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           DRS++IRTYNFSQ RITDHR   +L+ +E  L G  +D+II+ LL    A+     
Sbjct: 338 DRSDKIRTYNFSQNRITDHRCGYSLHNVEGCLNGYKLDEIIDALLDKETAEKSDEL 393


>gi|319783261|ref|YP_004142737.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169149|gb|ADV12687.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 376

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 168/346 (48%), Gaps = 16/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   + +R  ++   +      KL  E  ++   I+ +    Q  ++   L  + 
Sbjct: 26  DQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQSLEEGIASVKGLTQALEDNIGLIELG 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  I +          +             L     D     LEI AG GG+E+ 
Sbjct: 86  EEERDEGVIAEAEAAIRSMQGEAKA-----RQVETLLSGEADSNDTYLEIHAGAGGTESQ 140

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R++KVEVL   D ++ G K     I G   +  MK ESGVHR+ 
Sbjct: 141 DWASMLLRMYTRWAERRRFKVEVLEMHDGEEAGIKSATLMIKGHNAYGWMKTESGVHRLV 200

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS A+V V P     I++D+   D+RIDT R+SGSGGQHVNTTDSAVR
Sbjct: 201 RISPYDSNARRHTSFASVWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVR 260

Query: 246 ITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMA--NERSANRKLQIGSGDR 302
           ITH+ TGI +   +E+SQH+N+ +A ++LR+RLY+ E K+       +   K  IG G  
Sbjct: 261 ITHLATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEASKSDIGWG-- 318

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y     + + D R  +       VL G +DD +   L+  
Sbjct: 319 -HQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQR 363


>gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str.
           JGS1987]
 gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str.
           JGS1495]
 gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str.
           JGS1495]
 gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str.
           JGS1987]
          Length = 323

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 163/326 (50%), Gaps = 9/326 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-DHNSDSEIRDLAQI 81
           M E+   D   K  E       +  KI  +    +   D+  +      +D E       
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKEIIS 60

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           EV A+ KEI  L        +     D    IL +  G GGS+A  +   L RMY R+  
Sbjct: 61  EVKALSKEIDTL----KIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCE 116

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            + + +E +     D+ G K +   + G   +  +K E G+HR+ R+    A+G+  TS 
Sbjct: 117 KKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 176

Query: 202 ATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T+SAVRITHIPTGI+V   +E
Sbjct: 177 ASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQ  NR  AM +L+++L +++ +R   E+  +   ++       +IR+Y F     + D
Sbjct: 237 RSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLL 344
           HR N+    +  V+ G ID+ I   L
Sbjct: 296 HRTNVETSNVNGVMDGDIDNFIIAYL 321


>gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           132]
          Length = 331

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 108/334 (32%), Positives = 168/334 (50%), Gaps = 17/334 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I++       +  +      ++ +   +    DL
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q  +    K            LL     D  + ILE+  G GG+E+  +   LFRMY+R
Sbjct: 61  EQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH P+GI+V 
Sbjct: 176 TSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + DHR N    K++ V+ G I   I   L  
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIRPFIESYLRQ 326


>gi|82703392|ref|YP_412958.1| peptide chain release factor 2 [Nitrosospira multiformis ATCC
           25196]
 gi|82411457|gb|ABB75566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosospira
           multiformis ATCC 25196]
          Length = 310

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 107/316 (33%), Positives = 175/316 (55%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E   +  ++  +    ++ Q+ ++L  +  + + D+ ++ +A+         + +  
Sbjct: 1   MGREKKILESVVINLETISRQLQDARELFEMAEEEDDDATLQSVARDISH-----LEKAV 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
           +++ +  +  +  D  +C ++I++G+GG+EA  +   L RMY RY   R ++VEV+  S 
Sbjct: 56  SDMEFRRMFSNPMDTNNCFVDIQSGSGGTEAQDWAAMLERMYLRYCERRGYQVEVMEESP 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            +  G K     ISG   +  ++ E+GVHR+ R    ++  R HTS A+V V PE  E  
Sbjct: 116 GEVAGIKSASLKISGEYAYGYLRTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDETI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R+DT RASG+GGQH+N TDSAVRITH PTGI+V   S +SQH+NR  AM +
Sbjct: 176 EIDINPADLRVDTFRASGAGGQHINKTDSAVRITHNPTGIVVQCQSGRSQHRNRADAMAM 235

Query: 273 LRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L++RLY+ E ++   E+ A    K  IG G    +IR+Y   Q RI D R  +     + 
Sbjct: 236 LKSRLYEAELRKRNEEKQAIEDTKTDIGWG---HQIRSYVLDQARIKDLRTGVESGNTQA 292

Query: 331 VLQGYIDDIINPLLTA 346
           +L G +DD I   L  
Sbjct: 293 ILDGDLDDFIEASLKQ 308


>gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S]
 gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
 gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S]
 gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
          Length = 367

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 166/346 (47%), Gaps = 8/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L+ R  E+E + S+    +      +  + +S   S++   ++ +    D+  +  
Sbjct: 24  DVEELRRRIDELEHQASDPELWNDQEHAQQVTSQLSHAQSELRRVEELRSRLDDMAVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +      A  +  A   ++R     +    +     D +  ++ IRAG GG +AA 
Sbjct: 84  LAEEEG---PEAVADAHAERAQLRTDIEAMEVKTMLSGEYDQRDALVNIRAGAGGVDAAD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  R + VEV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 141 WAEMLMRMYIRWAEKRGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTLSIEMGTHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       +DI   D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 201 ISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPGGQSVNTTDSAVRL 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +EKSQ QN++ AM+VL+A+L + +R+    E  A  K   GS     +
Sbjct: 261 THVPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRQEERAEMDAL-KGDGGS-SWGNQ 318

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +     VL G ID  I   +    ++
Sbjct: 319 MRSYVLHPYQMVKDLRTEYEVNNPSAVLDGEIDGFIEAGIRWRMSE 364


>gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Florida]
 gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Puerto Rico]
 gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Florida]
          Length = 338

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 174/344 (50%), Gaps = 16/344 (4%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-DHNSDSEI 75
            E++ R S +   D      +  +  + +   ++ +   ++E  +   ++     SDSE 
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVADESDSEF 61

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            D           ++    ++     +     D   C L IR G GG+E+  +   L RM
Sbjct: 62  LDGLWSA----LTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRM 117

Query: 136 YERYA-ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           Y R+A     +  E++   D +  G K +   ISG G +   K ESGVHR+ R+   ++S
Sbjct: 118 YIRWAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSS 177

Query: 195 GRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS A+V V P    +ID++I  +D+RIDT RASG+GGQHVN T+SAVRITH+P+GI
Sbjct: 178 SRRHTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGI 237

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYN 310
           +V   + +SQHQNR  A  +LR+RLY++E +    + +   + +  IG G    +IR+Y 
Sbjct: 238 VVQCQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWG---HQIRSYV 294

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH--QAKM 351
               R + D R       ++ VL G +D  I   LT    QA+ 
Sbjct: 295 MHPYRMVKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLSQAQK 338


>gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
 gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
          Length = 356

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   ++    D      ++   +  + +++S     +    D    + 
Sbjct: 7   DVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  + +  +    E      ++R+  +      L     D +  +L I AG GG++A  
Sbjct: 67  LYELEPD--EDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 125 WAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+  E   +DIP +D+ I T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L A+L  + +++ A E +  R   I       +
Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R N     ++ V+ G +D  I+  L  
Sbjct: 304 IRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDASLRQ 345


>gi|223038905|ref|ZP_03609197.1| peptide chain release factor 2 [Campylobacter rectus RM3267]
 gi|222879878|gb|EEF14967.1| peptide chain release factor 2 [Campylobacter rectus RM3267]
          Length = 366

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 182/346 (52%), Gaps = 14/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K R  EIE   ++        K   + +E   IS I++          + +DL+ + 
Sbjct: 27  ESIKTRLKEIEELENDQNFWQDIAKAGAIGKEKTKISNILNNFLNAKSAVDDAKDLYELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N +          + A   E+ +    +   +L    DD K+ I+ I  G GG+E+ 
Sbjct: 87  NSENDEE-----TINSLFAEAGELEDKIVNLEISMLLSGEDDGKNAIVTIHPGAGGTESN 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ 
Sbjct: 142 DWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLKAENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++GR HTS  +V V P    +I+++I  +D++IDT RA G+GGQHVN T+SAVR
Sbjct: 202 RTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  AMK+L++RLY++E  +      +  K +IG G    
Sbjct: 262 ITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAAGSIEKSEIGWG---H 318

Query: 305 RIRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +IR+Y  F   ++ D+R      + + +L G I  +I  +L + ++
Sbjct: 319 QIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQKS 364


>gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
 gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
          Length = 321

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 167/323 (51%), Gaps = 12/323 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E AA+  I+  I    +   +  DL  ++   N    + D+       +
Sbjct: 3   DDPERAQALGKERAALEAIVVSIETLTEGANDTADLLDLVVAENDVDSLEDIKSEIQKLL 62

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
                     + +  +     D+ +  L+I++G+GG+EA  +   L RMY R+   + +K
Sbjct: 63  AILDE-----LEFRRMFSGEVDENNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEAKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            E++  S  +  G K       G   F  ++ E+GVHR+ R    ++  R HTS A+V V
Sbjct: 118 TELIECSAGEVAGIKSATIKFDGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFV 177

Query: 207 LPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE  +  +++I   D+R+DT RASG+GGQHVN TDSAVR+TH+PTG++V   +E+SQHQ
Sbjct: 178 SPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGVVVQCQTERSQHQ 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           NR  AMK+LR +LY++E  + + ++    + K  IG G    +IR+Y   Q RI D R  
Sbjct: 238 NRDNAMKLLRGKLYELEMLKRSEKQQALEDSKADIGWG---SQIRSYVLDQSRIKDLRTG 294

Query: 323 LTLYKLEYVLQGYIDDIINPLLT 345
           +     + VL G ID  I   L 
Sbjct: 295 VETSNTQAVLDGAIDMFIQASLK 317


>gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
 gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
          Length = 323

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 163/326 (50%), Gaps = 9/326 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-DHNSDSEIRDLAQI 81
           M E+   D   K  E       +  KI  +    +   D+  +      +D E       
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKELMEENDEETAKEIIS 60

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           EV A+ KEI  L        +     D    IL +  G GGS+A  +   L RMY R+  
Sbjct: 61  EVKALSKEIDTL----KIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCE 116

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            + + +E +     D+ G K +   + G   +  +K E G+HR+ R+    A+G+  TS 
Sbjct: 117 KKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 176

Query: 202 ATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T+SAVRITHIPTGI+V   +E
Sbjct: 177 ASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQ  NR  AM +L+++L +++ +R   E+  +   ++       +IR+Y F     + D
Sbjct: 237 RSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLL 344
           HR N+    +  V+ G ID+ I   L
Sbjct: 296 HRTNVETSNVNGVMDGDIDNFIIAYL 321


>gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
           BAA-613]
          Length = 339

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 170/327 (51%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    D   + T        +  ++  Y   +Q+ +D+  +I     +++   L    
Sbjct: 1   MEEPGFWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDS-SLIPEI 59

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              +E+    LEN    LLL  + D   + IL + AG GG+E+  +   L+RMY R+A  
Sbjct: 60  EEMLEQFKETLENMRMKLLLSGEYDS-NNAILRLNAGAGGTESCDWCSILYRMYCRWAES 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +K  VL   D ++ G K +   I G   +  ++ E GVHR+ R+    ++G+  TS  
Sbjct: 119 KGFKAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P   E  D+++  +DIR+DT R+SG+GGQH+N T SA+RITH PTGI+V   +E+
Sbjct: 179 SCDVMPNIEEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QN+ +AM++L+A+L  V+++  A + +  R   +       +IR+Y       + DH
Sbjct: 239 SQFQNKEKAMQMLKAKLLMVKQEEQAAKAAGIR-GDVKDIGWGSQIRSYVLQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R       ++ VL G ID+ I+  L  
Sbjct: 298 RTGEESGNVDAVLDGAIDNFISAYLRW 324


>gi|320531255|ref|ZP_08032234.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136522|gb|EFW28491.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 373

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 6/349 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ R AE+  + S     D         +A+S   + +   +   +  +DL  ++   
Sbjct: 26  EALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVESLGERIEDLEAMVELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELE-NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             +        +     +      + +E+    L     D +  ++ IR+G GG +AA F
Sbjct: 86  GEEEGEDAAEILAEAEADLSAISKDLSELEIRTLLSGEYDPRDAVITIRSGAGGVDAADF 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A   ++ V+VL++S  ++ G K +   I     +  +  E G HR+ R+
Sbjct: 146 AEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEIHAPYAYGTLSVEGGTHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V V+P   +   +DIP  DIRID  R+SG GGQ VNTTDSAVRIT
Sbjct: 206 SPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGPGGQSVNTTDSAVRIT 265

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTG++V+   EKSQ QNR  AM+VL++RL  ++++    ++         S    +++
Sbjct: 266 HLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKELAGDVKAS--WGDQM 323

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           R+Y  +  + + D R N  +   + V  G ID  I+  +   + +    
Sbjct: 324 RSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRKQQETAE 372


>gi|239917286|ref|YP_002956844.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
           luteus NCTC 2665]
 gi|239838493|gb|ACS30290.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
           luteus NCTC 2665]
          Length = 373

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 108/357 (30%), Positives = 180/357 (50%), Gaps = 16/357 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  +K   AE+E + S     D   +  +  + +S   + +      +   +DL T+  
Sbjct: 25  DLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSLESRIEDLETMVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     +  + D A  E+ +I K + ELE             D +  ++ IRAG GG +A
Sbjct: 85  LAAEEDEPSLLDDANQELTSIRKALEELEVVTL----LSGEYDQRDAVVTIRAGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R W  +V+ +S  ++ G K +   ++    F  +  E+G HR+
Sbjct: 141 ADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLSVEAGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   ++  ++IP  +I++D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQSVNTTDSAV 260

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GD 301
           R+TH+PTGI+V+  +EKSQ QNR  A++VL++RL  +       E  A +K   G     
Sbjct: 261 RMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLR----KAEEDAKKKEMAGDVKAS 316

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
             +++R+Y  +  + + D R          V  G+IDD ++  +   +A+ + +A E
Sbjct: 317 WGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRW-RAEQVKAAQE 372


>gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803]
 gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803]
          Length = 356

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 164/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   ++    D      ++   +  + + +   D  +    D    + 
Sbjct: 7   DVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  D E  D    E  +   ++R   +      L     D +  +L I AG GG++A  
Sbjct: 67  LY--DLEPDDDMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  R  KV V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 125 WAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+   ++D+DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTG+ V  + E+SQ QN+ +AM +L+A+L  + +++ A E +  R   I       +
Sbjct: 245 LHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R       ++ V+ G +D  I  LL  
Sbjct: 304 IRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLDPFIQALLRQ 345


>gi|126657098|ref|ZP_01728269.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
 gi|126621641|gb|EAZ92351.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
          Length = 358

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 7/344 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK     +E   ++    D      +    ++ + S++  Y Q  ++ +D   +  
Sbjct: 13  DLPALKANIKNLENTAAQPQFWDEPETAQKTLQKLNDLKSQLEQYQQWCEQLEDTEAIAE 72

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +     + E      ++    +      L     D K  +L I AG GG++A  
Sbjct: 73  LLELEDDT--TLRREAQENITQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQD 130

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + +KV +   S+ D+ G K     I G   F  +K E G HR+ R
Sbjct: 131 WAQMLLRMYTRWGEQQGYKVNLTELSEGDEAGIKSATLEIEGCYAFGYLKGEKGTHRLVR 190

Query: 188 VPATEASGRVHTSAATVAVLPEAAEID--VDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +    A+G+  TS A V V+P   E D  VDIP +D+ I T R+ G GGQ+VN  ++AVR
Sbjct: 191 ISPFNANGKRQTSFAGVEVMPMLEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVR 250

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTGI V  + E+SQ QN+ +A+ +L+A+L  + +++ A E +  R   +       
Sbjct: 251 IVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVE-AAWGN 309

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR Y F   + + D R N+    +  V+ G +D  I   L   
Sbjct: 310 QIRNYVFHPYQMVKDLRTNVETTDVTGVMDGNLDSFIEAYLRYD 353


>gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
 gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
          Length = 381

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 179/346 (51%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            + D+  + AE E   +     D   K T+    I  +  +I  +    Q   DL  +  
Sbjct: 28  DVDDINKKIAEKEALTTAPGFWDDNAKATKIMNDIKLLKGRIEPWQDLVQRVDDLEALYE 87

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G   +D  I    + +    + +        + L L  D  D   C L + AG GG+EA
Sbjct: 88  LGLEENDKSIESELKEQYEKAKADYEH----QSILNLLSDEVDKNDCFLSVHAGAGGTEA 143

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY+R+A    +KVEVLS  +  +GG K I   ISG  V+   K E+GVHR+
Sbjct: 144 CDWTFMLSRMYQRWAERHGYKVEVLS-QEEAEGGLKSINMKISGPYVYGYTKGEAGVHRL 202

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ R HTS A+V V P     I+V+I  +D+R+DT R+ G GGQHVN T+SAV
Sbjct: 203 VRISPFDANARRHTSFASVYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQHVNKTESAV 262

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           R THIPTGI+V   SE+SQ  NR  AM +L++RLY+  ++    E S  A  K  I  G 
Sbjct: 263 RFTHIPTGIVVACDSERSQLMNRASAMSILKSRLYEYYKEEREKENSKFAGEKKDISFG- 321

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y F     + DHR   ++  ++ V+ G ID  ++  L+A
Sbjct: 322 --SQIRSYVFQPYTMVKDHRTKYSVGNIQGVMDGDIDGFLDEFLSA 365


>gi|27467454|ref|NP_764091.1| peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC
           12228]
 gi|251810188|ref|ZP_04824661.1| peptide chain release factor 2 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|293368216|ref|ZP_06614845.1| peptide chain release factor RF2 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27314997|gb|AAO04133.1|AE016745_232 peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC
           12228]
 gi|251806240|gb|EES58897.1| peptide chain release factor 2 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|291317639|gb|EFE58056.1| peptide chain release factor RF2 [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 332

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/334 (31%), Positives = 166/334 (49%), Gaps = 17/334 (5%)

Query: 23  MSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +   K  +      A+  I++          +      ++ +   +    +L 
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      E+  +         LL     D  + ILE+  G GG+E+  +V  L RMY+RY
Sbjct: 61  EEVQQFEEQIDQ-----YELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 CEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V  
Sbjct: 176 SFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNN 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG G    +IR+Y F   
Sbjct: 236 QNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             I DHR N    K++ V+ G I   I   L   
Sbjct: 293 SMIKDHRTNEETGKVDAVMDGEIGPFIEAYLRKE 326


>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 369

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 167/341 (48%), Gaps = 9/341 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L      IE    +    D   K  E  A +S        +   K+E +D   +I   
Sbjct: 28  DNLFVEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFINLKEELKDQSDLIDII 87

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
              +E  D       ++    +E+ +            D  +  + I AG GG EA  + 
Sbjct: 88  EETNEELDSLVDVENSLNMLKKEISS-FKIKTELDGEYDRNNAYMVIHAGAGGLEATDWA 146

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+   R +K ++   ++ + GG K     I G   +  +K E GVHR+ R+ 
Sbjct: 147 EMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAYGYLKGERGVHRLVRIS 206

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++S R HTS A++ + PE   ++ V+I  +D+RIDT RASG+GGQHVN TDSAVRITH
Sbjct: 207 PFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGGQHVNKTDSAVRITH 266

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSER 305
           IPTG++  + +E+SQ QN+  AMK+L A+L  ++ +    +    +    QI  G    +
Sbjct: 267 IPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQGNYTQIAWG---SQ 323

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR+Y F     + DHR N  +  +E V+ G ID  I+  L 
Sbjct: 324 IRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLA 364


>gi|312115773|ref|YP_004013369.1| peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220902|gb|ADP72270.1| Peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 376

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 163/343 (47%), Gaps = 10/343 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K R A +   + +    D   +  +       + + ++ Y Q      D   +I   
Sbjct: 26  DKAKIRLANLNEIVEDPTLWDNPQRAQKLLRERQHLDTALTAYSQLAARLDDAVGLIELG 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             +S+   + + E      +      +     L     D     LE+ AG GG+E+  + 
Sbjct: 86  EEESDEEVVKEAEASLAVLQTEV--QKREVEALLSGEADGNDTFLEVHAGAGGTESQDWT 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + +KVE++ S+  ++ G K     + G   F  +K ESGVHR+ R+ 
Sbjct: 144 EMLLRMYMRWAEEQGYKVELIESAAGEEAGLKSATIQVKGSNAFGWLKTESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS A+V V P   +     +   D RIDT RASG+GGQHVNTTDSAVRITH
Sbjct: 204 PYDSNARRHTSFASVWVYPVVDDTIDIAVNESDCRIDTYRASGAGGQHVNTTDSAVRITH 263

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSER 305
           +PTGI+V    E+SQH+NR  A  +L+ARLY+ E K+  +    +A  K  IG G    +
Sbjct: 264 VPTGIVVQCQMERSQHKNRATAWNMLKARLYEQELKKREDAAHAAAASKTDIGWG---HQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y     + + D R  +       VL G +   I   L   
Sbjct: 321 IRSYVLQPYQMVKDLRTGIVNTNPPAVLDGDLTAFIEAALAQR 363


>gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
           16841]
 gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
           16841]
          Length = 338

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/332 (31%), Positives = 174/332 (52%), Gaps = 16/332 (4%)

Query: 23  MSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    +         +   ++   ++       +  + + L  +  + N  S I ++ 
Sbjct: 1   MEDGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYEENDASLIPEIE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           ++    +        + I    L     D  + IL + AG GG+E+  +   LFRMY ++
Sbjct: 61  EMLNEFVTTF-----DNIRIKTLLSGEYDGDNAILSLHAGAGGTESCDWAQMLFRMYSKW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +++ VL S D D+ G K I   I+G   +  +K E GVHR+ R+    A+G+  T
Sbjct: 116 ADSRGYELVVLDSLDGDEAGIKSITFQINGENAYGYLKSEKGVHRLVRISPFNAAGKRQT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+P+  E  D++I  +D+RIDT R+SG+GGQH+N T SA+RITH+PTGI+V   
Sbjct: 176 SFVSCDVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG- 314
           +E+SQHQN+ +AM++L+A+LY ++ +  A + +  R    +IG G+   +IR+Y      
Sbjct: 236 NERSQHQNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGN---QIRSYVMQPYT 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + DHR  +    ++ V+ G ID  IN  L  
Sbjct: 293 MVKDHRTGVETGNVDSVMDGKIDLFINGYLKW 324


>gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
 gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
          Length = 357

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 171/343 (49%), Gaps = 8/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +    E+E   +                 ++       ++   ++   DL  +  
Sbjct: 15  DVSAKELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWRGLERRVNDLTELAV 74

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  + +  + E+  +  E+  LE      L      D+++ +L + AG GG E+  
Sbjct: 75  LSYEDPSLSNEIEHEISGLTAELNSLEVG----LAFSGQYDNRNALLTVHAGAGGVESQD 130

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L RM+ R+A  + + +E+L  S  ++ G K     I G   +  +K E GVHR+ R
Sbjct: 131 WAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGVKSATLQIDGEYAYGFLKSEHGVHRLIR 190

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A    HTS A V ++PEA +  D+DI  EDI+I+  R+SG GGQ+V    +AVRI
Sbjct: 191 LSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIEMFRSSGPGGQNVQKVSTAVRI 250

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIP+GI+V + +E+SQHQNR  AM++L ++L  VE  + A ER+  +  +I S +   +
Sbjct: 251 THIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERI-SAEWGNQ 309

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y       + DHR +  +   E VL+G +D  IN  L  +
Sbjct: 310 IRSYVLHPYKMVKDHRTDYEVGNAETVLEGELDGFINAYLRQN 352


>gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
 gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
          Length = 342

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 109/336 (32%), Positives = 163/336 (48%), Gaps = 16/336 (4%)

Query: 20  ELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
             +  +    +      KL  E   +   I+ +   +Q+ ++  +L  +      D  ++
Sbjct: 2   NNKAEDPTLWNDATEAQKLMRERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIVK 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D          +      N      +     D     LE+ +G GG+E+  +   L RMY
Sbjct: 62  DAEDALKALRSEA-----NRRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A    +KVEVL   D ++ G K     + G   F  +K ESGVHR+ R+   +++ R
Sbjct: 117 TRWADREGFKVEVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNAR 176

Query: 197 VHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-M 254
            HTS ++V V P     I +DI   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI +
Sbjct: 177 RHTSFSSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAV 236

Query: 255 VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFS 312
               E+SQH+NR +A  +LRARLY+VE ++  +  +A    K  IG G    +IR+Y   
Sbjct: 237 ACQQERSQHKNRAKAWDMLRARLYEVELQKREDAANAQAASKTDIGWG---HQIRSYVLQ 293

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + I D R  +       VL G ++  +   L   
Sbjct: 294 PYQLIKDLRTGVESTAPGNVLDGDLNQFMEAALAHR 329


>gi|66044558|ref|YP_234399.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63255265|gb|AAY36361.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           B728a]
          Length = 329

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 106/334 (31%), Positives = 166/334 (49%), Gaps = 15/334 (4%)

Query: 20  ELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
              + +    +      +L  E + ++ I+  +        + +DL  +  +    + + 
Sbjct: 2   NRELEDPNVWNNPAYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMSAEEEDQAAVD 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D+A       E   +     + +  +     D  +  L+I+AG+GG+EA  +   L RMY
Sbjct: 62  DVAAEVERLRESLEK-----LEFRRMFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  R +   ++  S  +  G K     I G   F  ++ E GVHR+ R    ++  R
Sbjct: 117 LRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNR 176

Query: 197 VHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS + V V PE  +  ++DI   D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V
Sbjct: 177 RHTSFSAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVV 236

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRTYNFS 312
              +E+SQH N+  AMK+LRARLY+ E ++     +   + K  IG G    +IR+Y   
Sbjct: 237 SCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWG---HQIRSYVLD 293

Query: 313 QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             RI D R N+     + VL G ID+ +   L  
Sbjct: 294 ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 327


>gi|325571387|ref|ZP_08146887.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
           12755]
 gi|325155863|gb|EGC68059.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
           12755]
          Length = 329

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/328 (31%), Positives = 173/328 (52%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    D   K  +   A +        ++Q  +E ++L  ++     +++    A+++
Sbjct: 1   MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELD 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               +   +         +L  +  D  + I+E+  G GG+E+  +   L RMY R+   
Sbjct: 61  ARIGKLNEKM--ASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++VE L     D+ G K +   + G   +  +K E GVHR  R+   +++ R HTS  
Sbjct: 119 HGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRFVRISPFDSAKRRHTSFC 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    IDV+I  +D++IDT RASG+GGQH+N T+SAVRITHIP G +V + +++
Sbjct: 179 SVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPKGTVVASQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR +AM +L+A+LY +E ++   E +A R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N     ++ V+ G +D  I+  L 
Sbjct: 296 DHRTNFETGNVQAVMDGDLDGFIDAYLK 323


>gi|326771885|ref|ZP_08231170.1| peptide chain release factor 2 [Actinomyces viscosus C505]
 gi|326638018|gb|EGE38919.1| peptide chain release factor 2 [Actinomyces viscosus C505]
          Length = 373

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 99/349 (28%), Positives = 168/349 (48%), Gaps = 6/349 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ R AE+  + S     D         +A+S   + +   +   +  +DL  ++   
Sbjct: 26  EALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVESLGERIEDLEAMVELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELE-NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             +        +    ++      + +++    L     D +  ++ IR+G GG +AA F
Sbjct: 86  GEEEGEDAAEILAEAEMDLAAISKDLSDLEIRTLLSGEYDPRDAVITIRSGAGGVDAADF 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    + V+VL++S  ++ G K +   +     +  +  E G HR+ R+
Sbjct: 146 AEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAYGTLSVEGGTHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V V+P   +   +DIP  DIRID  R+SG GGQ VNTTDSAVRIT
Sbjct: 206 SPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGPGGQSVNTTDSAVRIT 265

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTG++V+   EKSQ QNR  AM+VL++RL  ++++    ++         S    +++
Sbjct: 266 HLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKELAGDVKAS--WGDQM 323

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           R+Y  +  + + D R N  +   + V  G ID  I+  +   + +    
Sbjct: 324 RSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRKQQETAE 372


>gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
 gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
          Length = 371

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 176/339 (51%), Gaps = 16/339 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +R   IE  +++  +     +LT    E + ++  I          ++ Q+   +  +  
Sbjct: 32  DRLKTIEEELAKPEAWQNPEELTPILREKSRLTEEIESWEALRDLHEDLQEWLEMADEDQ 91

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
               ++ L++       +  +     +   LL    +D  + ILEI  G GG+EA  +  
Sbjct: 92  GQEVLQALSETNANLAAQLNK-----VEMELLLSKPEDKGNAILEIHPGAGGTEAQDWAE 146

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+   R +KV+ L S   ++ G K +   I G   +  ++ E G+HR+ R+  
Sbjct: 147 MLLRMYLRWCERRGFKVQELDSLPGEEAGIKSVTLQIQGTFAYGLLQAEKGIHRLIRISP 206

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            + SGR HTS A+V V PE A +I++D+  EDIR+D  R+SG GGQ+VN T SA+RITH 
Sbjct: 207 FDTSGRRHTSFASVDVYPEAADDIEIDVNDEDIRVDVFRSSGPGGQNVNKTSSAIRITHF 266

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           P+GI+V   +EKSQ +N+  AMK+L++RLYD ERK+   ++ A    K  I  G    +I
Sbjct: 267 PSGIVVQCQNEKSQRRNKETAMKILKSRLYDQERKKREADKQAEYASKEAIAWG---SQI 323

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           RTY     R + DHR N     ++ VL G ID  +   L
Sbjct: 324 RTYTLQPYRLVKDHRTNTEAGDVDKVLDGDIDVFLRSYL 362


>gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
           23834]
 gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
           23834]
          Length = 367

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K+R  E+     +    +      ++ +E   +  I+  +        + + L  + 
Sbjct: 30  DGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKVLEGIVLTLDNIAGGIDDNRLLIDMA 89

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +     + +      ++        + +  +     D  +C ++I AG GG+EA 
Sbjct: 90  LEEGDEDSFAAIEEDVAELEKQMAE-----LEFKRMFNQPADVNNCFIDITAGAGGTEAE 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            + G L RMY RY   + +KVE++   D +  G       + G   +  ++ E+GVHR+ 
Sbjct: 145 DWAGMLLRMYVRYGERKGFKVEIMEQDDGEIAGINRATIRLEGEYAYGLLRTETGVHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ + HTS A+V V PE     +V+I   D+R DT RASG+GGQH+N TDSAVR
Sbjct: 205 RHSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTFRASGAGGQHINKTDSAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           +THIPTGI+V + + +SQH NR    ++LRA+L+++E ++   E+ A    K  +G G  
Sbjct: 265 MTHIPTGIVVQSQNSRSQHDNRRVCEEMLRAKLFELEMRKRNEEKQALEEGKSDVGWG-- 322

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R +      + VL G +DD I   L  
Sbjct: 323 -SQIRSYVLDSSRIKDLRTSHETGNTKAVLDGDLDDFIEASLKQ 365


>gi|212716462|ref|ZP_03324590.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660715|gb|EEB21290.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
           16992]
          Length = 376

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/355 (29%), Positives = 174/355 (49%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L  +  ++E++ +E    D      +  + +S + S++       Q   D+ T+  
Sbjct: 25  DVDRLTAQAKDLEVQAAEPGLWDDPENAQKVTSKLSAVQSQLKRLSSASQRIDDVETLVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G    D++    A+ EV +I+ ++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGQEEDDADTLAEARSEVESIQNDLADMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K +V+ +S  ++ G K     +     + RM  E G HR+
Sbjct: 141 ADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +D+P  +IR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G ID  I   +     +   +  E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWRHEQRRKAEEE 373


>gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0200_36I24]
 gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium
           HF0500_02A10]
          Length = 334

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 112/331 (33%), Positives = 169/331 (51%), Gaps = 14/331 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQ 80
           M+ +   D   K +E  A  + + + +  +     +  +L  +  + +H  D ++     
Sbjct: 1   MATAGFWDNQDKASEVIAESNRLKNWVKPWHDLNTKVSELTEIRDLLEHEDDEDLTHELI 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
            EV  IE  I +LE       + +  DD +  IL +  G GG E+  +   L RMY R+A
Sbjct: 61  SEVDKIEGPIEDLEL----RTMLQGPDDHRGAILTVHPGAGGLESQDWAEMLTRMYSRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               + + VL     D+ G K     + G   +  +K E G+HR+ R+   +A  R HTS
Sbjct: 117 ENHGYDLNVLDMQPGDEAGIKSATLEVVGGHAYGYLKAEKGIHRLVRISPFDAQSRRHTS 176

Query: 201 AATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            A+V + P    EI+++I   D+R+DT RASG+GGQHVN TDSA+RITHIPTGI V    
Sbjct: 177 FASVFIYPLVDDEIEIEIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIAVSCQQ 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-R 315
           E+SQH NR  AMK+L+A LY+   +    E+ A    K  IG G+   +IR+Y F     
Sbjct: 237 ERSQHMNRATAMKMLQASLYERALEEKEQEKEAIEATKTDIGWGN---QIRSYVFQPYTM 293

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + DHR +L +  +  V+ G +D  I   L  
Sbjct: 294 VNDHRTDLKISDVNKVMDGNLDPFIEAYLKQ 324


>gi|149038509|gb|EDL92839.1| rCG41113 [Rattus norvegicus]
          Length = 384

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 145/315 (46%), Positives = 204/315 (64%), Gaps = 5/315 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            + +   + ++K++E +D  +++ D N D  ++ LA+ E+   +KEI EL++ I  LL+P
Sbjct: 67  QLAAAARLLNEKERELRDTESLLHDENED--LKKLAESEIALCQKEIAELKHRIISLLVP 124

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D    ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 125 SEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 184

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI + I  +D+R
Sbjct: 185 SASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTEIKLVINPKDLR 244

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTGI+     E+SQ +NR  AMK LRARLY +  
Sbjct: 245 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRL 304

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +    +R + RK+Q+G+  RSE+IRTYNF Q R+TDHRIN +L+ LE  +QG   +DD+I
Sbjct: 305 EEETAKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDLI 364

Query: 341 NPLLTAHQAKMIGSA 355
             L      + +   
Sbjct: 365 QSLKDYSDYESLVEM 379


>gi|328870409|gb|EGG18783.1| peptide chain release factor 1 [Dictyostelium fasciculatum]
          Length = 530

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 152/346 (43%), Positives = 219/346 (63%), Gaps = 7/346 (2%)

Query: 13  KNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           + +F  ++  +           K+++E   +   ++   +   K QE ++L  ++ +   
Sbjct: 179 ETKFDGLQRLIESQSLPQSEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEVK- 237

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D E ++L   ++  + +++++ E  +   LLP D DD+ + I+EIRAGTGGSEA LF  +
Sbjct: 238 DKEEKELMNQDLKEMVEQVKDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFALE 297

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGG---YKEIVATISGRGVFSRMKFESGVHRVQRV 188
           +  MYE YA    WK EVL     D  G    ++  A+ISGRGVF  +K ESGVHRVQR+
Sbjct: 298 MLGMYEGYAQTMGWKFEVLEIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQRI 357

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P TE  GRVHTS  TVA+LPE  E+D+ I   ++RID  R+SG+GGQ VNTTDSAVRITH
Sbjct: 358 PETETMGRVHTSTVTVAILPEPKEVDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRITH 417

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG +V    E+SQ  NR +AMK+LRARLY+ ER R+ NERS++R  QIG   RSE+IR
Sbjct: 418 LPTGTVVAMQDERSQLMNRAKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEKIR 477

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMI 352
           TYNF Q R+TDHR+N++   +E V+ G  ++D+I  ++   Q K +
Sbjct: 478 TYNFPQDRVTDHRVNISTNNIESVMAGESLNDLIEEIILQLQTKDL 523


>gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
 gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
          Length = 327

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/330 (31%), Positives = 182/330 (55%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MSE    +  I   +    ++ +  K   Y   +   ++    +   + D  +++  +  
Sbjct: 1   MSEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEMLDEDDSLQEELEAS 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                +++ ++ +     LL  +  D  + ILEI  G+GG+EA  +   LFRMY R+   
Sbjct: 61  ----LEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G+ID  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGFIDGFIDAYLKWR 323


>gi|296199479|ref|XP_002747187.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           [Callithrix jacchus]
          Length = 382

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 142/314 (45%), Positives = 208/314 (66%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ + + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELVAVVKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY+RYAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEMFDMYQRYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AMK LRA+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMKKLRAKLYSMHL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRI+ +L+ L+  +QG   +D+++
Sbjct: 301 EEETNKRDNARKIQIGSKGRSEKIRTYNFPQNRVTDHRISKSLHDLQTFMQGDYLLDELV 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKEYADYESLVE 374


>gi|126739118|ref|ZP_01754812.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
 gi|126719735|gb|EBA16443.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
          Length = 374

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 112/333 (33%), Positives = 170/333 (51%), Gaps = 5/333 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  +  Y   KQ+  D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDDPEAAQKLMRERQTLVDAMDTYKGIKQDLADNIELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +A  E      + +  E E+  LL  +   +     LEI +G GG+E+  +   L R
Sbjct: 91  EEVVADAEEALKALQQKAAEKELEALLDGEADSN--DTFLEINSGAGGTESCDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S +  ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSETAGEEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHNPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  + +   +   +   G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHESA-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + + D R +      + VL G +D  +   L 
Sbjct: 328 YQMVKDLRTSHETSDTKGVLDGDLDGFMAATLA 360


>gi|37527422|ref|NP_930766.1| peptide chain release factor 2 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786857|emb|CAE15922.1| Peptide chain release factor 2 (RF-2) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 310

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 170/316 (53%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E +++  I+  I   +Q  ++ Q L  +  + + +    +          +++ E  
Sbjct: 1   MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFNEAVVE-----LEQLEEKL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +     D   C L+++AG+GG+EA  +   L RMY R+A  + +K E++  SD
Sbjct: 56  GQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            +  G K     I G   +  ++ E+GVHR+ R    ++ GR HTS ++  + PE   +I
Sbjct: 116 GEVAGLKSATIKIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D++I   D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK 
Sbjct: 176 DIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+LY++E ++     +     K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLYELEMQKKNANKQEMEENKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQS 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGDLDKFIEASLKA 308


>gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
 gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
 gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
 gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
 gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131]
 gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
 gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
 gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
 gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
 gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131]
          Length = 326

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 181/333 (54%), Gaps = 12/333 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ +  K   +   ++   +   ++   + D  +++  +  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDSLKEELEEN 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           ++     + ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LMQ----LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS A
Sbjct: 117 NGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFA 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V++  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V+S+ ++
Sbjct: 177 SVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           DHR N  L +++ V+ G I+  I+  L      
Sbjct: 294 DHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 326


>gi|313889933|ref|ZP_07823573.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121699|gb|EFR44798.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 327

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/330 (31%), Positives = 178/330 (53%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ +  K   +   +   ++    +     D  ++     E
Sbjct: 1   MTEPDFWNDTIAAQKTSQELNELKVKFDTFHNMENLSEETELYMEMLEEDESVK----GE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +     ++ ++       LL  +  D  + ILEI  G+GG+EA  +   LFRMY R+   
Sbjct: 57  LEESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V+S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+ + A E +A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQDKKAEEVNALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR N  + +++ V+ G ID  I+  L   
Sbjct: 294 DHRTNFEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|152965225|ref|YP_001361009.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216]
 gi|189039977|sp|A6W7F6|RF1_KINRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151359742|gb|ABS02745.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216]
          Length = 355

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 205/354 (57%), Gaps = 16/354 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L +  AE+E R+++            L   YA +  +              +        
Sbjct: 8   LLDEHAELERRLADPAVHADAALARTLGRRYAELGAV-------VVAHAAWRAAADDAEA 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
               +        E+ A+++   E   ++  LLLP+D DD +  ILEI+AG GG E+ALF
Sbjct: 61  ARELAAEDAAFAAELPALQRAAEEAGEKLRRLLLPRDPDDSRDVILEIKAGEGGEESALF 120

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV-----FSRMKFESGVH 183
            GDL RMY RYA    W  EVL ++ +D GGYK++   +  RG      + R+K+E GVH
Sbjct: 121 AGDLLRMYLRYAERHGWVTEVLDANPSDLGGYKDVSVAVKTRGAAAEGVWHRLKYEGGVH 180

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GRVHTSA  V V+PEA E++V +   D+R+D  R+SG GGQ VNTTDSA
Sbjct: 181 RVQRVPVTESQGRVHTSAVGVLVVPEAEEVEVAVDPNDLRVDVFRSSGPGGQSVNTTDSA 240

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTG++    +EKSQ QNR +AM++LRARL+ + ++    + SA R+ Q+ + DR
Sbjct: 241 VRITHLPTGVVATCQNEKSQLQNREQAMRILRARLHALAQEAADAQASAARRSQVRTVDR 300

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           SER+RTYN+ + RI DHR     Y L+ VL G +D +I   + A +A  + + S
Sbjct: 301 SERVRTYNYGENRIADHRTGFKAYNLDTVLDGDLDPVIQSAIDADEAAQLAATS 354


>gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 372

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 117/353 (33%), Positives = 178/353 (50%), Gaps = 10/353 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I  L++    +E   S            +    I  +  KI  + +   + +DL
Sbjct: 21  MRVSLDIDRLQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLCSQWEDL 80

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      +       ++E   ++ E +    +    +L     D  + IL I AG GG
Sbjct: 81  KVLTELSIEEGNHEMAEELEKELLDLEKKI--EDFKIEVLLNGPYDKNNAILSIHAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY R+AA + +KVE L     ++ G K +   I G   +  +K E GV
Sbjct: 139 TEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+GR HTS A V VLPE   + D++I  ED+ IDT RASG+GGQHVN T+
Sbjct: 199 HRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTE 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRI HIPTGI+V   +E+SQH+NR  A+K+L+A+L +++ K    +    +  Q  IG
Sbjct: 259 SAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTDIG 318

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            G+   +IR+Y F     + DHR    +  +E V+ G ID  IN  L   + +
Sbjct: 319 WGN---QIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLKKFRNE 368


>gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
 gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
          Length = 341

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 119/338 (35%), Positives = 189/338 (55%), Gaps = 6/338 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
            + R AE+EL +++    +   +  +    ++ +  K+  +    Q+ +DL  +  +  +
Sbjct: 4   KEERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVL-RELGA 62

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + E  D+ Q     I+    EL+     LLL    D   + ++ + AG GG+EA  +   
Sbjct: 63  EEEDPDILQEIEEGIQTIQSELDRWHLQLLLNGPYDR-NNALVTLHAGAGGTEAMDWNEM 121

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+   + +KV++L S   D+ G K    + SG   +  +K E GVHR+ R+   
Sbjct: 122 LMRMYIRWGEKKGYKVDILDSLAGDEAGMKSATLSFSGENAYGYLKGEMGVHRLVRISPF 181

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +ASGR HTS A+V VLPE + +ID+ I  ED+++DT RASG+GGQHVN T+SAVRITHIP
Sbjct: 182 DASGRRHTSFASVEVLPEVSDDIDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIP 241

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI+V   SE+SQ QNR  AM++L+A+L++ +R+  A+E +   K          +IR+Y
Sbjct: 242 TGIVVACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRL-KGDQQDIAFGSQIRSY 300

Query: 310 NFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            F     + DHR N  +  +  V+ G IDD ++  +  
Sbjct: 301 VFHPYNLVKDHRTNCEVGAVYNVMDGEIDDFVSAYMIW 338


>gi|289706413|ref|ZP_06502771.1| peptide chain release factor 2 [Micrococcus luteus SK58]
 gi|289556908|gb|EFD50241.1| peptide chain release factor 2 [Micrococcus luteus SK58]
          Length = 373

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 107/357 (29%), Positives = 180/357 (50%), Gaps = 16/357 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  +K   AE+E + S     D   +  +  + +S   + +      +   +DL T+  
Sbjct: 25  DLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSLESRIEDLETMVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     +  + + A  E+ +I K + ELE             D +  ++ IRAG GG +A
Sbjct: 85  LAAEEDEPSLLEDANQELTSIRKALEELEVVTL----LSGEYDQRDAVVTIRAGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R W  +V+ +S  ++ G K +   ++    F  +  E+G HR+
Sbjct: 141 ADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLSVEAGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   ++  ++IP  +I++D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQSVNTTDSAV 260

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GD 301
           R+TH+PTGI+V+  +EKSQ QNR  A++VL++RL  +       E  A +K   G     
Sbjct: 261 RMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLR----KAEEDAKKKEMAGDVKAS 316

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
             +++R+Y  +  + + D R          V  G+IDD ++  +   +A+ + +A E
Sbjct: 317 WGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRW-RAEQVKAAQE 372


>gi|307128516|ref|YP_003880546.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI]
 gi|306482978|gb|ADM89848.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI]
          Length = 355

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 140/348 (40%), Positives = 209/348 (60%), Gaps = 5/348 (1%)

Query: 1   MVFLSH---KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M+ + +   K+I  +K RF E+   + +   +       + Y     I   I+ Y+  K+
Sbjct: 1   MIKIDNFLLKKIESIKKRFYELYSLIIKPDIIHNNKNYIKIYKEYKNINKIINYYNNYKK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + ++L  +      DS+   L    +    + +          +  ++ ++ K+ ++E+R
Sbjct: 61  KLKNLKEIENLIKLDSDKEFLELANIDKKSQILELKLILKKIQIYFENQNNHKNALMELR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +FV D+FRMY  Y     W  E+L+       GYKEI+  I G+ V+  +K
Sbjct: 121 AGTGGDEACIFVEDIFRMYTMYFKELCWNYEILNMQHGPIKGYKEIILEIQGKNVYGTLK 180

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           FESGVHRVQRVP TE+ GR+HTSA TVA+ P E  +  +++ L DI+ DT RASG+GGQH
Sbjct: 181 FESGVHRVQRVPYTESQGRLHTSAITVAIFPEEDYKKKINLILSDIKRDTFRASGAGGQH 240

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+R+THIPTGI+     E+SQH+N  +AMKVLRAR+Y  E  +   + S  RK 
Sbjct: 241 VNKTESAIRLTHIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELNQKKEKLSKERKD 300

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPL 343
            I +GDRS +IRTYN+ QGR+TDHRIN ++Y L++ + G I+++I  L
Sbjct: 301 LISTGDRSAKIRTYNYPQGRVTDHRINKSIYNLDHFMNGKINEMITAL 348


>gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           siraeum 70/3]
          Length = 370

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 178/342 (52%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +LK   A++E + ++    +      +    I    + +  Y++ ++   D+ T++ 
Sbjct: 26  DLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESYDDVMTMLE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   L +I+ LA                L     D  + IL   AG GG+EA  
Sbjct: 86  LAQEEDDESMLPEIQELAKHFRTEL--ESQKLATLLSGEFDHNNAILTFHAGAGGTEAQD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  L+RMY  +A     KV VL   D ++ G K     + GR  +  +K E+GVHR+ R
Sbjct: 144 WVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENGVHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V   ++SGR HTS A+V V+PE  E  D++I  ++I++D  RASG+GGQ VN T SAVRI
Sbjct: 204 VSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKTSSAVRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+    +E+SQHQNR  AM++L+++L +++ +   ++ S  +  Q+       +
Sbjct: 264 THIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQL-QIAWGAQ 322

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR    +  +  V+ G +D  IN  L A
Sbjct: 323 IRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364


>gi|15080204|gb|AAH11873.1| Mitochondrial translational release factor 1-like [Homo sapiens]
 gi|119568097|gb|EAW47712.1| mitochondrial translational release factor 1-like, isoform CRA_a
           [Homo sapiens]
 gi|119568101|gb|EAW47716.1| mitochondrial translational release factor 1-like, isoform CRA_a
           [Homo sapiens]
 gi|312151704|gb|ADQ32364.1| mitochondrial translational release factor 1-like [synthetic
           construct]
          Length = 380

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 145/314 (46%), Positives = 207/314 (65%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++
Sbjct: 301 EEEINKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELV 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKEYADYESLVE 374


>gi|332213665|ref|XP_003255945.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 380

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 144/314 (45%), Positives = 207/314 (65%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++
Sbjct: 301 EEETNKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINRTLHDLETFMQGDYLLDELV 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKEYADYESLVE 374


>gi|313113161|ref|ZP_07798787.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624500|gb|EFQ07829.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 373

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 173/343 (50%), Gaps = 10/343 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   + R  E+E  MS     D      + +  +  +  K+S +++ +    D  T++  
Sbjct: 27  IDASRKRVQELEHTMSRPGFYDDADLSKKVFDEVGDLKGKLSRFEKLQGLYDDAETMLEM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + + +   + + E           E     + +     D  + IL   AGTGG+EA  +
Sbjct: 87  LDEEYDPAMIPEAEESVNAVGKAVDEL--QLMTMLNGEYDHSNAILTFHAGTGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY ++A+     VEVL   D D+ G K     + G   +  +K E+GVHR+ RV
Sbjct: 145 AEMLYRMYNKWASNHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRV 204

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ R  TS A++ V+PE    I VDI  EDI +   R+SG+GGQH+N T SAVR+ 
Sbjct: 205 SPFDANARRQTSFASLEVMPELDNTIQVDISPEDIEMQVYRSSGAGGQHINKTSSAVRLI 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTG++V   +++SQ QNR  AM++L+A+LY + +++  ++    +  + +I  G    
Sbjct: 265 HKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWG---H 321

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y F     + DHR N     ++ V+ G +D  I   L A
Sbjct: 322 QIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|240168635|ref|ZP_04747294.1| peptide chain release factor 2 [Mycobacterium kansasii ATCC 12478]
          Length = 376

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 161/347 (46%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ +  ++E   S+    D   +     + +S    ++   +Q +    DL  +  
Sbjct: 28  DVDALRAKIDKLEHEASDPKLWDDQARAQRVTSELSHAQGELRRVEQLRSRLDDLPVLYE 87

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENE-INYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               +        +     E +    E E      L     D++  ++ IR+G GG +AA
Sbjct: 88  LAAEEEGEAAAEALAEADAELKALHAEIEATEVRTLLSGEYDEREALVTIRSGAGGVDAA 147

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 148 DWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLV 207

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 208 RISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVR 267

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K + GS     
Sbjct: 268 LTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKRLEERAELDAL-KGEGGS-SWGN 325

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 326 QMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWRNRK 372


>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229576671|sp|B2V5M0|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 369

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 119/345 (34%), Positives = 180/345 (52%), Gaps = 16/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L+    +++  M++    +      +++     +   + +I   D+K     D  T++
Sbjct: 27  EKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILTVDKKVNNLLDYITLL 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D E+ +  + E+  IEKEI  LE            +     IL ++AG+GG EA 
Sbjct: 87  EMEE-DQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNA----ILTVQAGSGGVEAC 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R ++VE++    +D  G K     I G   +  +K E GVHR+ 
Sbjct: 142 DWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATLIIKGPYAYGYLKGEQGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ R HTS + V+V+PE  E   V+I  ED+RIDT RASG+GGQHVN TDSAVR
Sbjct: 202 RISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRASGAGGQHVNKTDSAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPTGI+V   SE+SQ QN+L+A  +L+A+LY +E ++   ++      K  I  G  
Sbjct: 262 ITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQLELEKRKEKQKELEGEKKDITWG-- 319

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y F   + + D R       +E V+ G IDD I   L  
Sbjct: 320 -SQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKW 363


>gi|325066934|ref|ZP_08125607.1| peptide chain release factor 2 [Actinomyces oris K20]
          Length = 373

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 102/351 (29%), Positives = 169/351 (48%), Gaps = 10/351 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ R AE+  + S     D         +A+S   + +   +   +  +DL  ++   
Sbjct: 26  EALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVESLGERIEDLEAMVELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELE-NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             +        +     +      + +++    L     D +  ++ IR+G GG +AA F
Sbjct: 86  GEEEGEDAAEILAEAETDLAAISKDLSDLEIRTLLSGEYDPRDAVITIRSGAGGVDAADF 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    + V+VL++S  ++ G K +   +     +  +  E G HR+ R+
Sbjct: 146 AEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAYGTLSVEGGTHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V V+P   +   +DIP  DIRID  R+SG GGQ VNTTDSAVRIT
Sbjct: 206 SPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGPGGQSVNTTDSAVRIT 265

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRSE 304
           H+PTG++V+   EKSQ QNR  AM+VL++RL  ++++    E  A +K   G       +
Sbjct: 266 HLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQ----EEDAKKKELAGDVKASWGD 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ++R+Y  +  + + D R N  +   + V  G ID  I+  +   + +    
Sbjct: 322 QMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRKQQETAE 372


>gi|296127692|ref|YP_003634944.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
 gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
          Length = 367

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 167/346 (48%), Gaps = 16/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +  R  EI+   ++    +      KL +E   +   I  +    +      +L  + 
Sbjct: 27  DSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDKIEPVENLIKNSNNIYELVEMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N     ++L    +             +    L     D K+  L + AG GG+E+ 
Sbjct: 87  IESNDIEMEKELEGECIELQRVFDE-----LETKNLFSGEFDSKNAYLTLNAGAGGTESC 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+     + VE+      D+ G K+I   + G   +  ++ E GVHR+ 
Sbjct: 142 DWASMLSRMYVRFCERHGFTVEITDELPGDEAGIKQISFYVQGLYAYGYLRSEIGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS   V+V+P+  E  +V+I   D+R+DT RASG+GGQHVN T SA+R
Sbjct: 202 RISPFDANAKRHTSFVAVSVMPDIDEDIEVEINPSDLRVDTYRASGAGGQHVNKTSSAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDR 302
           ITHIPT I+V   +E+SQH N+  AMK+L+A+LY +E+ ++  E+      K  I  G+ 
Sbjct: 262 ITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKEKQKIAGEKTDIAWGN- 320

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y F   + + D R       +  V+ G ID+ I+  L   
Sbjct: 321 --QIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLKQQ 364


>gi|167842463|gb|ACA03159.1| RF1 [Dictyostelium fasciculatum]
          Length = 515

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 152/346 (43%), Positives = 219/346 (63%), Gaps = 7/346 (2%)

Query: 13  KNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           + +F  ++  +           K+++E   +   ++   +   K QE ++L  ++ +   
Sbjct: 164 ETKFDGLQRLIESQSLPQSEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEVK- 222

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D E ++L   ++  + +++++ E  +   LLP D DD+ + I+EIRAGTGGSEA LF  +
Sbjct: 223 DKEEKELMNQDLKEMVEQVKDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFALE 282

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGG---YKEIVATISGRGVFSRMKFESGVHRVQRV 188
           +  MYE YA    WK EVL     D  G    ++  A+ISGRGVF  +K ESGVHRVQR+
Sbjct: 283 MLGMYEGYAQTMGWKFEVLEIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQRI 342

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P TE  GRVHTS  TVA+LPE  E+D+ I   ++RID  R+SG+GGQ VNTTDSAVRITH
Sbjct: 343 PETETMGRVHTSTVTVAILPEPKEVDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRITH 402

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG +V    E+SQ  NR +AMK+LRARLY+ ER R+ NERS++R  QIG   RSE+IR
Sbjct: 403 LPTGTVVAMQDERSQLMNRAKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEKIR 462

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMI 352
           TYNF Q R+TDHR+N++   +E V+ G  ++D+I  ++   Q K +
Sbjct: 463 TYNFPQDRVTDHRVNISTNNIESVMAGESLNDLIEEIILQLQTKDL 508


>gi|148244437|ref|YP_001219131.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326264|dbj|BAF61407.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 364

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 167/349 (47%), Gaps = 15/349 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           H  +   + R  EI L M +    +       L  E + +  I       +   ++ Q+L
Sbjct: 23  HLNLKKKQYRLEEILLEMEDPNIWENPNQAQSLGREKSKLISICQTFEQVNAILEDAQEL 82

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +    N D+E  +    ++   +  I +LE    +  +     D  S  L+I++G+GG
Sbjct: 83  LNLAQTEN-DTETANGIINDLDTAQSSIEKLE----FKRMFSGDLDANSAYLDIQSGSGG 137

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   + RMY R+     +K++++  S  +  G K       G   F  ++ E G+
Sbjct: 138 TEAQDWAEMVLRMYLRWGEKHNFKIKLMEVSAGEVAGIKSATIHFKGEYAFGWLRTEIGI 197

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED-IRIDTMRASGSGGQHVNTTD 241
           HR+ R     A+G+ HTS  +V V PE             +RIDT RASG+GGQHVN T+
Sbjct: 198 HRLVRKSPFNANGKRHTSFCSVFVSPEIDSDIDIDISPSDLRIDTYRASGAGGQHVNKTE 257

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIG 298
           SAVRITH+PT  +V   + +SQH N+ +A+K L+++LY +E ++   E+      K  I 
Sbjct: 258 SAVRITHLPTNTVVQCQNGRSQHANKNQAIKQLQSKLYKLEMQKRNTEKQSLEQSKSDIS 317

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            G    +IR+Y   Q R+ D R  +     + +L+G +D  +   L + 
Sbjct: 318 WG---HQIRSYILDQSRVKDLRTGIESSNTQNILEGNLDQFMKASLKSR 363


>gi|282875665|ref|ZP_06284536.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135]
 gi|281295692|gb|EFA88215.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135]
 gi|329723235|gb|EGG59765.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU144]
 gi|329736827|gb|EGG73092.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU028]
 gi|329737925|gb|EGG74149.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU045]
          Length = 333

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/335 (31%), Positives = 166/335 (49%), Gaps = 17/335 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M++    +   K  +      A+  I++          +      ++ +   +    +L
Sbjct: 1   MMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIEL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            +      E+  +         LL     D  + ILE+  G GG+E+  +V  L RMY+R
Sbjct: 61  EEEVQQFEEQIDQ-----YELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y     +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V 
Sbjct: 176 TSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              I DHR N    K++ V+ G I   I   L   
Sbjct: 293 YSMIKDHRTNEETGKVDAVMDGEIGPFIEAYLRKE 327


>gi|254454841|ref|ZP_05068278.1| peptide chain release factor 2 [Octadecabacter antarcticus 238]
 gi|198269247|gb|EDY93517.1| peptide chain release factor 2 [Octadecabacter antarcticus 238]
          Length = 375

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 114/335 (34%), Positives = 168/335 (50%), Gaps = 5/335 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  I+ Y+  +QE  D   +I     + +
Sbjct: 31  RLEEFNARVEDPTLWDDPDAAQKLMRDRQSLVDAIASYEAIRQELSDHVELIEMGEMEDD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              + + E        +  E E+  L       D     LEI +G GG+EA  +   L R
Sbjct: 91  AGVVTEAEDGLKVLAAKAAEKELEAL--LNGEADANDTFLEINSGAGGTEACDWAAMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAERKGYKVELQSESAGEEVGIKSASYKISGHNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHAPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  + +   +   +   G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQIEMDKRSALVNEVHENA-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + + D R        + VL G +D  +   L   
Sbjct: 328 YQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362


>gi|149194096|ref|ZP_01871194.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2]
 gi|149136049|gb|EDM24527.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2]
          Length = 364

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 191/343 (55%), Gaps = 8/343 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R  EI    ++    +      +     + I+ K+  Y + K   QD   +    
Sbjct: 27  DELQKRLDEITQMENDPNFWNDPKNSAKIQKEKNAILRKLEKYKKAKNSLQDNKDMYELA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             + +  +    EV    KE+ ++  ++   ++    +DDK+ I+ I  G GG+E+  + 
Sbjct: 87  TMEED--EETLNEVFNDVKELEKIIRDLEIEVMLSGENDDKNAIITIHPGAGGTESHDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  R WKV++L     D+ G K+    + G   +  +K E+G+HR+ RV 
Sbjct: 145 SMLYRMYLRYAERRGWKVDILDYQAGDEAGIKDATILVKGENAYGYLKAENGIHRLVRVS 204

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++ GR HTS A+V V P    +I+++I  +DIRID  RASG+GGQHVN T+SAVRITH
Sbjct: 205 PFDSGGRRHTSFASVQVSPEIDDDIEIEIDEKDIRIDVYRASGAGGQHVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V    ++SQH+N+  A K+L+++LY++E ++   E     K ++G G    +IR
Sbjct: 265 IPTGIVVSCQQDRSQHKNKEMAFKMLKSKLYELELEKRKAEEEGKPKDEMGWG---HQIR 321

Query: 308 TYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +Y  F   ++ D+R N    K++ +L G +D+II  +L + Q+
Sbjct: 322 SYVLFPYQQVKDNRSNKAYSKVDDILDGDLDEIIEDVLISQQS 364


>gi|302338432|ref|YP_003803638.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293]
 gi|301635617|gb|ADK81044.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293]
          Length = 339

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +      +E         +   +  +    +  +  ++  +       +DL T+      
Sbjct: 1   MAQEIKVLEAESGSPEFWEDRERAEKRLGELKRLHKRLDPWKDLLSSFEDLETLFELAAE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + +  +  + ++     E+ +    +N   + +   D  +  L I +G GG+EA  +   
Sbjct: 61  EQD--ESQEHDIKRQLDEVGDTYRGLNLTEMFQGEFDGSNAFLTIHSGAGGTEACDWTAM 118

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A  R++ V+ L   + + GG K +   I+G  VF  +K E GVHR+ R+   
Sbjct: 119 LLRMYTRWAERREFSVQTLDLLEAE-GGVKSVTLQINGDFVFGYLKSEIGVHRLVRISPF 177

Query: 192 EASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           ++SGR HTS A+V + P    +I+VDI  E++RIDT RA G+GGQHVN TDSAVRITHI 
Sbjct: 178 DSSGRRHTSFASVYISPVIDDDIEVDIKPEELRIDTYRAQGAGGQHVNKTDSAVRITHIS 237

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDRSERIR 307
           TGI+V   +E+SQ++N+  A+K+LR+RLY+  +K    E+   A  K +I  G+   +IR
Sbjct: 238 TGIVVQCQNERSQYKNKAMALKILRSRLYEHYKKEQEKEQEKHAQEKKEISWGN---QIR 294

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F     + DHR    +  ++ V+ G IDD I   L   Q +
Sbjct: 295 SYVFQPYTMVKDHRTKHEVGNIQAVMDGEIDDFIIAFLNWMQTE 338


>gi|289432457|ref|YP_003462330.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
 gi|288946177|gb|ADC73874.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
          Length = 361

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 173/343 (50%), Gaps = 8/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +    E+E   S            +    ++       ++   ++   DL  +  
Sbjct: 20  DVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELAV 79

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D  + +  + E+  +  E+  LE      L      D+++ +L + AG GG E+  
Sbjct: 80  LSREDPSLSNEIEHEISGLTAELDSLEVG----LAFSGQYDNRNALLTVHAGAGGVESQD 135

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L RM+ R+AA + + +E+L  S  ++ G K     I G   +  +K E GVHR+ R
Sbjct: 136 WAGMLLRMFMRWAAKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIR 195

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A    HTS A V ++PEA +  D+DI  EDI+ID  R+SG GGQ+V    +AVR+
Sbjct: 196 LSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRV 255

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIP+GI+V + +E+SQHQNR  AM++L ++L  VE  + A ER+  +  +I S +   +
Sbjct: 256 THIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERI-SAEWGSQ 314

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR+Y       + DHR +  +   E VL+G +D  I+  L  +
Sbjct: 315 IRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQN 357


>gi|226531101|ref|NP_001152654.1| peptide chain release factor 2 [Zea mays]
 gi|195658609|gb|ACG48772.1| peptide chain release factor 2 [Zea mays]
 gi|223950205|gb|ACN29186.1| unknown [Zea mays]
          Length = 449

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 159/341 (46%), Gaps = 5/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+   A +E + S+S   D   K      +++ +  K+ + +  K + ++  T++  
Sbjct: 101 LQQLEEDIASLENKSSDSSLWDDPSKAQGILVSLTEVKDKVKLLNDFKLQIEEAETIVKL 160

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E   I K + +  +      L     D +  ++ I AG GG++A  +
Sbjct: 161 TEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINISAGAGGTDAQDW 220

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R 
Sbjct: 221 ADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQ 280

Query: 189 PATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS A V V+P      + VDIP ED+ I   RA G GGQ+VN  ++AVR+
Sbjct: 281 SPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRM 340

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTGI V  S E+SQ  N+++A+  L+A+L  +  ++ A+E    R   I   +  ++
Sbjct: 341 VHIPTGIAVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIR-GDIVKAEWGQQ 399

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR Y F   + + D R       +  V+ G +D  I   L 
Sbjct: 400 IRNYVFHPYKLVKDVRTGCETSDITGVMDGELDPFIRAYLK 440


>gi|315187113|gb|EFU20870.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           thermophila DSM 6578]
          Length = 364

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 110/350 (31%), Positives = 177/350 (50%), Gaps = 10/350 (2%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +K + + +E         +      E  + +  +  +   +    QE +D+HT+     
Sbjct: 16  SIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASLVQEVEDIHTLYDLAA 75

Query: 71  SDSEI-RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +++  ++  + E+     E      E+    L  +  D K   L I AG GG EA  + 
Sbjct: 76  EENDPSQEEEEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYLTIHAGAGGMEACDWA 135

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+   + +  +++     D+GG K +   + G   F  +K E+GVHR+ R+ 
Sbjct: 136 SMLLRMYLRWLERKGFSTQIVDM-VEDEGGIKSVTVEVKGDYAFGYLKGEAGVHRLVRIS 194

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +ASGR HTS A+V V P   +  +VDI  ED+RIDT R+ G+GGQHVN T+SAVRITH
Sbjct: 195 PFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAGGQHVNKTESAVRITH 254

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK--RMANERSANRKLQIGSGDRSER 305
           +PTGI+V   +E+SQH+NR  AM++LR+RLY+  ++      E+ A  K  I  G+   +
Sbjct: 255 LPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKKAIEKKDISWGN---Q 311

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           IR+Y F     + D R  +    ++ V+ G +D  I   L     +   +
Sbjct: 312 IRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYLLQQWKERQEA 361


>gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
           28L]
 gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
           28L]
          Length = 352

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 95/351 (27%), Positives = 173/351 (49%), Gaps = 12/351 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +   + R  +++++MS+       D   ++++E  A+   +       ++  + ++   +
Sbjct: 1   MARKEERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLEL 60

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +    S   D+ +       +  +         LL     D  + I+   AG GG+EA
Sbjct: 61  AMEEKDTSLTADIEKQYEALAGEVEK-----REIRLLLSGEYDRCNAIVTFHAGAGGTEA 115

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A    + + ++     D+ G K    ++ G   +  +K E GVHR+
Sbjct: 116 QDWTQMLIRMYTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRL 175

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ R HTS   V V+PE   ++DV I ++++R+D  RASG+GGQHVN T SAV
Sbjct: 176 VRISPFDAAARRHTSFTAVDVMPELPDDVDVKINMDEVRVDYFRASGAGGQHVNKTSSAV 235

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+   +K LRA+L+++E ++ A  ++          +  
Sbjct: 236 RMTHLPTGIVVQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQA-IEWG 294

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
            +IR+Y F     + DHR ++     + V+ G +D  I   L   + +   
Sbjct: 295 SQIRSYVFHPYNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREKNRKTA 345


>gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 330

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 112/334 (33%), Positives = 177/334 (52%), Gaps = 18/334 (5%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQ 80
           MS+    D   K  E     + + + +  Y Q   + +D + ++       DS +    +
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDSSMESEIK 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             V AIE+ + + E     LLL     D  + IL   AG GG+EA  +   L RMY R+A
Sbjct: 61  EYVKAIEETVEKQEV----LLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               + +E++     D+ G K     I G   F  +K E GVHR+ R+   +A+ R HTS
Sbjct: 117 EKSGFSIELMDEQPGDEAGTKSSTFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTS 176

Query: 201 AATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            A V V+PE  +  +++I ++D+++DT RASG+GGQH+N TDSAVR+TH PTGI+V   +
Sbjct: 177 FAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQT 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS----GDRSERIRTYNFSQG 314
           ++SQ QNR +A+++LRA+L+++E ++      A  K QIG      +   +IR+Y F   
Sbjct: 237 QRSQMQNREQALRLLRAKLFELELEK-----QAEIKEQIGGTYQAIEWGSQIRSYVFHPY 291

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + DHR N+    ++ V+ G +D  I   L   
Sbjct: 292 NLVKDHRTNVETGNVQAVMDGNLDQFIEGFLKKE 325


>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
 gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
          Length = 372

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 108/354 (30%), Positives = 183/354 (51%), Gaps = 12/354 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           ++  +K    E++  M+ S   +   K  +       +   I   +  ++   D+  ++ 
Sbjct: 24  KLDSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEENIQQLEATEKVLSDIRELLH 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +          +    ++  ++  ++          D K+  L I+AG GG EA  
Sbjct: 84  ITEEEDLETQTL---LKEELEKAEQMIKDMEIRAFLSGEMDAKNAYLTIQAGAGGVEACD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    ++VEV+  + +D  G K     I G   +  +K ESGVHR+ R
Sbjct: 141 WAQMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ R HTS A+V V+P+  E  +++I  EDI ++T RASG+GGQ+VN TD+AVRI
Sbjct: 201 ISPFDANARRHTSFASVTVVPQIDESINIEIREEDIEMETFRASGAGGQYVNKTDTAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
            H PTGI+V    E+SQ+QNR++A+++L+A+LY ++ + +  ++ A    K +IG G   
Sbjct: 261 RHKPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEKKRALEGEKTEIGWG--- 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            +IR+Y F   + + D R  + +  +E V+ G ID  I   L   +AK    AS
Sbjct: 318 HQIRSYVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYLRW-KAKQEAQAS 370


>gi|114609863|ref|XP_518818.2| PREDICTED: mitochondrial translational release factor 1-like
           isoform 6 [Pan troglodytes]
          Length = 380

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 145/314 (46%), Positives = 207/314 (65%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++
Sbjct: 301 EEETNKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELV 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKEYADYESLVE 374


>gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 369

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 119/345 (34%), Positives = 180/345 (52%), Gaps = 16/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L+    +++  M++    +      +++     +   + +I   D+K     D  T++
Sbjct: 27  EKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILTVDEKINNLLDYITLL 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D E+ +  + E+  IEKEI  LE            +     IL ++AG+GG EA 
Sbjct: 87  EMEE-DQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNA----ILTVQAGSGGVEAC 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R ++VE++    +D  G K     I G   +  +K E GVHR+ 
Sbjct: 142 DWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATVIIKGPYAYGYLKGEQGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ R HTS + V+V+PE  E   V+I  ED+RIDT RA G+GGQHVN TDSAVR
Sbjct: 202 RISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRAGGAGGQHVNKTDSAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHIPTGI+V   SE+SQ QN+L+AM +L+A+LY +E ++   ++      K  I  G  
Sbjct: 262 ITHIPTGIVVACQSERSQLQNKLKAMNMLKAKLYQLELEKRKEKQKELEGEKKDITWG-- 319

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y F   + + D R       +E V+ G IDD I   L  
Sbjct: 320 -SQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKW 363


>gi|160947120|ref|ZP_02094287.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
 gi|158446254|gb|EDP23249.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
          Length = 349

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 10/346 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + H  I  L++ +  +E +  +    +           +  +  KI  +    ++ +D  
Sbjct: 1   MIHFDISKLEDEYKNLESQSFKEDFWNDSKSAKSILDNMKNLKFKIETFTSLSRKIEDSI 60

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +   + +  +    +        E   L  ++N L++ +   +  + ILEI AG GG+
Sbjct: 61  EFLEILSDEEFMEYEKEALKNIYNIEKEYLSLKLNTLMVGEYDSN--NAILEIHAGAGGT 118

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +A  +   L R+Y R+   + +   +L  + + +GG K +   + G+  +  +K E GVH
Sbjct: 119 DAQDWTEMLQRLYTRWINSKGFSFSILDYNSDTEGGIKSVTLKVDGKNAYGFLKGEKGVH 178

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   ++S + HTS A+V V P      D++I  +D+RIDT R+ G+GGQHVN TDS
Sbjct: 179 RLVRISPYDSSNKRHTSFASVDVFPEIEEITDIEINPKDLRIDTYRSGGAGGQHVNKTDS 238

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGS 299
           AVRITHIPTG+ V   SE+SQ  NR  AM+ L A+L  ++++    +    +    QI  
Sbjct: 239 AVRITHIPTGVTVSCQSERSQMFNRDTAMRQLIAKLLIIKQEENREKIEDIQGKYSQIAW 298

Query: 300 GDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           G    +IR+Y F     + DHR       +E V+ G ID+ IN  L
Sbjct: 299 G---SQIRSYVFQPYTLVKDHRTGYETGNVESVMNGNIDEFINQYL 341


>gi|260655334|ref|ZP_05860822.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
 gi|260629782|gb|EEX47976.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
          Length = 348

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 11/344 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVD--AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
             L+ +  E+ LR S+          +++   + +S + S +  +D  ++   DL T+  
Sbjct: 11  EGLRRQADELRLRSSDPAFWSTGDAKEVS---SQLSRLESSLEHWDHLERMFSDLETMAE 67

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D +    A+ +  + E             LL  +  D +  I+ I AG+GG ++  
Sbjct: 68  LLEIDDDPELAAEFDAKSGEYSREV--EHRQMDLLLSEAYDSRDAIVTIHAGSGGLDSQD 125

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +K  +L    +++ G K +  T+SG   +  +K E+GVHR+ R
Sbjct: 126 WAEMLYRMYLRWCEENGYKTRLLDLQQDEEAGLKSVTFTVSGSCAYGYLKSETGVHRLVR 185

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   + + R HTS + V V P+   +++V I  ED+RIDT R+SG+GGQHVN TDSAVRI
Sbjct: 186 ISPFDTNKRRHTSFSGVVVSPQLPDDVEVAIRDEDLRIDTYRSSGAGGQHVNMTDSAVRI 245

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQH N+  AM+VLR++LYD++ +    E       +  S     +
Sbjct: 246 THLPTGIVVSCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKES-SWGHQ 304

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           IR+Y       + DHR       +  VL G +D  I   L   +
Sbjct: 305 IRSYVLQPYTLVKDHRTGEETGNVAAVLDGDLDRFILAYLRWRK 348


>gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
 gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
          Length = 346

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 97/350 (27%), Positives = 168/350 (48%), Gaps = 12/350 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEE---YAAISPIISKISIYDQKKQEEQ 60
           +SH  +     +  + + +  E        K  +      A+  I+ +    D +     
Sbjct: 1   MSHFDLSSKNKQIEDYDKQTLEPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLNSLN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D    +      SE  +   +       ++ +        +L     D  + ILEI  G 
Sbjct: 61  DTADELK-----SEFDEELMMIAEEEYMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGA 115

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+E+  +   L+RMY RYA    +KV VL     D+ G K +   + G   +  +K E 
Sbjct: 116 GGTESCDWASMLYRMYTRYAEKHGFKVTVLDYLPGDEAGIKSVTFLVEGDKAYGYLKSEK 175

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHR+ R+   ++  R HTS A++ V+P+  +  ++DI  ED+ ++T RASG+GGQH+N 
Sbjct: 176 GVHRLVRISPFDSGARRHTSFASLDVMPQFNDEIEIDIKPEDLIVETKRASGAGGQHINK 235

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+ H PTGI+    + +SQH+NR   ++VL++RLY +E +    + +  + +Q  
Sbjct: 236 TDSAVRMVHKPTGIVATCQNGRSQHENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQ-S 294

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + +   +IR+Y       + D R      +++ VL G +D+ I   L + 
Sbjct: 295 ANEWGSQIRSYVMHPYSLVKDVRTGYETSQVQSVLDGDLDEFIFAYLKSQ 344


>gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
 gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
          Length = 326

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 176/333 (52%), Gaps = 12/333 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ +  K   +   ++   +   ++   + D  +++  +  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDSLKEELEEN 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           ++     + ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 61  LMQ----LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS A
Sbjct: 117 NGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFA 176

Query: 203 TVAVLPEAAEIDVDIPLED-IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE  +       +  I++DT R+ G+GGQ+VN   + VR+THIPTGI+V+S+ ++
Sbjct: 177 SVEVMPELDDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           DHR N  L +++ V+ G I+  I+  L      
Sbjct: 294 DHRTNFELAQVDKVMDGEINGFIDAYLKWRIED 326


>gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
 gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
          Length = 377

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 106/341 (31%), Positives = 176/341 (51%), Gaps = 6/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +   +    E+E + ++    +              +  KI+ Y+  +++  D   +I  
Sbjct: 30  LDAARAEVRELEEKAAQQDFWNDIENSQSVLQKTRQLKDKIASYEALRRKTDDTLALIEL 89

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + + ++  LA+          +   + +    L     D K+ IL   AG GG+EA  +
Sbjct: 90  ADEEEDLSVLAEAAEAVDSVRAQI--DTMRLATLLTGEYDAKNAILTFHAGAGGTEAQDW 147

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY R+A    + V+VL   D ++ G K     I G   +  +K E GVHR+ RV
Sbjct: 148 AEMLYRMYTRWAERHGFNVQVLDYLDGEEAGLKSASVLIEGLNAYGYLKSEIGVHRLVRV 207

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS A+V V+PE  +  +VDI  EDI++D  R+SG+GGQH+N T SAVR+T
Sbjct: 208 SPFDSSGRRHTSFASVEVMPEIDDSIEVDIRPEDIKMDVFRSSGAGGQHINKTSSAVRLT 267

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +E+SQHQNR  AM++L+++L +++ +   ++    + +Q        +I
Sbjct: 268 HLPTGIVVSCQNERSQHQNREMAMRMLKSKLVEIKEREHYDKIEDIKGVQ-KEIAWGSQI 326

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y F     + DHR +     +  V+ G +D  IN  L A
Sbjct: 327 RSYVFMPYTLVKDHRTSFESGNIGAVMDGDLDGFINAYLKA 367


>gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
           WAL-14163]
 gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
 gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
           WAL-14163]
 gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
          Length = 335

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 105/329 (31%), Positives = 172/329 (52%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQ 80
           M E    D   + T+       +   +  Y   +Q+ +D+  +I      +D  +    Q
Sbjct: 1   MEEPGFWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYEENDPSMIPEIQ 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             +      + ++        L     D+ + IL++ AG GG+EA  +   L+RMY+R+A
Sbjct: 61  EMLDEFINSLEDI----RTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + +  EVL   D D+ G K I   I+G   F  +K E GVHR+ R+    A+G+  TS
Sbjct: 117 DKKGYTTEVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTS 176

Query: 201 AATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
             +  V+P+  E  D+++  +D+RIDT R+SG+GGQH+N T SA+RITHIPTGI+V   +
Sbjct: 177 FVSCDVMPDIEEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQN 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           E+SQ QN+ +AM++L+A+LY ++++  A + S  R   +   +   +IR+Y       + 
Sbjct: 237 ERSQFQNKDKAMQMLKAKLYLLKQQENAEKLSDIR-GDVKDINFGNQIRSYVMQPYTLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           DHR N     +  V+ G ID  I+  L  
Sbjct: 296 DHRTNAENGNVNAVMDGDIDLFISAYLKW 324


>gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
 gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
          Length = 351

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 14/349 (4%)

Query: 9   ICDLKNR---FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I DL +R     +++         D           I+ +  +I  ++Q  +  QD   +
Sbjct: 6   IFDLSSREMLLEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGLEL 65

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
               +      +  + ++      + +   +     L     D ++ +L I AG GG+++
Sbjct: 66  AESED------ESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGTDS 119

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+   R +  E+L  S+ ++ G K +   ++G   +  ++ E GVHR+
Sbjct: 120 QDWASMLMRMYLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVHRL 179

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIP--LEDIRIDTMRASGSGGQHVNTTDSA 243
            R+   +A+ R HTS A V VLPE +  D +I    +D+RID  R+S +GGQ+V    +A
Sbjct: 180 VRLSPFDAAHRRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNATA 239

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V   +E+SQ QNR  AM+VLRARL +++R+    + +  R   I   + 
Sbjct: 240 VRITHIPTGIVVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIK-AEW 298

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             +IR+Y     + + DHR        + VL G +D  I   L + + K
Sbjct: 299 GSQIRSYVLHPYQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQKTK 347


>gi|115472651|ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group]
 gi|33146529|dbj|BAC79675.1| putative translation releasing factor2 [Oryza sativa Japonica
           Group]
 gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa Japonica Group]
          Length = 460

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 165/353 (46%), Gaps = 9/353 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+   A +E + ++S   D   K  E   A++ +  ++ + +  K + ++  T++  
Sbjct: 108 LDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKLQVEEAETIVKL 167

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E   I K + +  +      L     D +  ++ I AG GG++A  +
Sbjct: 168 TEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDW 227

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R 
Sbjct: 228 ADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQ 287

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS A V V+P   E  +D  IP ED+ I   RA G GGQ+VN  ++AVR+
Sbjct: 288 SPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRM 347

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTGI V  + E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 348 VHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQ 406

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           IR Y F   + + D R       +  V+ G +D  I   L       + +A+E
Sbjct: 407 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKY----KLSAAAE 455


>gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 371

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 174/342 (50%), Gaps = 10/342 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  LK +  E+  +  E    D      +     +    KI  YD+      D   +I  
Sbjct: 28  IDSLKEKVVELNKKQMEPGFWDDNESAQKVIRETNSYQRKIDQYDKLIDLITDAEDLIAL 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              + +    +  + L  E E    E ++N LL  +        IL I AG GG+EA  +
Sbjct: 88  MEIEEDYSSYSDFQELVDEIEKDTAEFKLNTLLNGEYDSH--DAILSIHAGAGGTEAQDW 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RYA  + +KVE L     D+ G K +   ISG   +  +K E GVHR+ R+
Sbjct: 146 ASMLLRMYTRYAENKGFKVETLDLLKEDEAGIKSVTLKISGDNAYGYLKGEKGVHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ R HTS ++V V PE  +    +I  E+++IDT R+SG+GGQHVNTTDSAVRIT
Sbjct: 206 SPFDSNKRRHTSFSSVDVFPEIDDDTEVEIKDEELKIDTYRSSGAGGQHVNTTDSAVRIT 265

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSE 304
           HIPTGI+V   +E+SQ QNR +AM +L+A+L  +  +    +    +    QI  G    
Sbjct: 266 HIPTGIVVQCQNERSQIQNREKAMNMLKAKLVALAEEEKKEKIEDLQGNYSQIAWG---S 322

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +IR+Y F     + DHR N+ +  +E V+ G +D  IN  L 
Sbjct: 323 QIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLDIFINAYLQ 364


>gi|295100603|emb|CBK98148.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
           prausnitzii L2-6]
          Length = 373

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 106/343 (30%), Positives = 172/343 (50%), Gaps = 10/343 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   + R  E+E  MS     D      + +  +  +  K++ +++ +    D  T++  
Sbjct: 27  IDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLVM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + + +   + + E           E     + +     D  + IL   AGTGG+EA  +
Sbjct: 87  LDEEYDPEMVPEAEEAVNAVGKAVDEL--QLMTMLNGEYDHSNAILTFHAGTGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY ++A      VEVL   D D+ G K     + G   +  +K E+GVHR+ RV
Sbjct: 145 AEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRV 204

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ R  TS A++ V+PE    I VDI  EDI +   R+SG+GGQH+N T SAVR+ 
Sbjct: 205 SPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVYRSSGAGGQHINKTSSAVRLI 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           H PTGI+V   +++SQ QNR  AM++L+A+LY + +++  ++    + +Q  I  G    
Sbjct: 265 HKPTGIVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWG---H 321

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y F     + DHR N     ++ V+ G +D  I   L A
Sbjct: 322 QIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|227546362|ref|ZP_03976411.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|317482557|ref|ZP_07941572.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
 gi|227213343|gb|EEI81215.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|316915979|gb|EFV37386.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
          Length = 374

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 105/355 (29%), Positives = 171/355 (48%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK    ++E + +     D      +  + +S   S++   +   Q   D+ T++ 
Sbjct: 25  DVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVE 84

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D +  D AQ E+  I+K++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGHEEGDQDSLDEAQGEIGEIQKDLDQMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY RY     +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +DIP  DIR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G I+  I   +     +   + +E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWRHEQRRAAETE 373


>gi|269215856|ref|ZP_06159710.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
 gi|269130806|gb|EEZ61882.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
          Length = 364

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 106/342 (30%), Positives = 161/342 (47%), Gaps = 8/342 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I + + R  +++  +S+    D            S I S +  Y       +D    +  
Sbjct: 25  IEENERRLHDLDAVISQPGFWDDAQAAQATSKRASDIRSTLDEYRAACATLEDARAALEL 84

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D             +   +  +E          D  D    I+ +  G+GG EA  +
Sbjct: 85  IEEDDAFAVEFDELRAGLSSALDRMEV----ESWFTDPSDACDAIVSVNPGSGGLEAQDW 140

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY RYA  + WKV++L     +  G    V  I G+  F  ++ E GVHR+ R+
Sbjct: 141 TDMLYRMYVRYAEKKGWKVKLLDVVPGEVIGLDRAVVQIEGKNAFGMLRSEHGVHRLVRI 200

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
             T+   R  T+ A V VLP    +I+V+I   D+R+D  R+SG GGQ VNTTDSAVR+T
Sbjct: 201 SPTDDKKRRQTTFAGVEVLPVVEDDIEVEINPSDVRVDVYRSSGPGGQCVNTTDSAVRLT 260

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +EKSQ QN+  A KVLRA+LY++ER++  +E  A R  +        +I
Sbjct: 261 HLPTGIVVTCQNEKSQLQNKESAFKVLRAKLYELERQKREDEMDALR-GEKRDNSFGSQI 319

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R Y     + + D R  +    ++ VL G ID+ +       
Sbjct: 320 RNYVLYPYQLVKDVRSGVETGNVDAVLDGQIDEFVIGYHRWR 361


>gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
           3626]
 gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
           3626]
          Length = 323

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 163/326 (50%), Gaps = 9/326 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-DHNSDSEIRDLAQI 81
           M E+   D   K  E       +  KI  +    +   D+  +      +D E       
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKEIIS 60

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           EV A+ KEI  L        +     D    IL +  G GGS+A  +   L RMY R+  
Sbjct: 61  EVKALSKEIDTL----KIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCE 116

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            + + +E +     D+ G K +   + G   +  +K E G+HR+ R+    A+G+  TS 
Sbjct: 117 KKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 176

Query: 202 ATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T+SAVRITHIPTGI+V   +E
Sbjct: 177 ASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQ  NR  AM +L+++L +++ +R   E+  +   ++       +IR+Y F     + D
Sbjct: 237 RSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLL 344
           HR N+    +  V+ G ID+ I   L
Sbjct: 296 HRTNVETSNVNGVMDGDIDNFIIAYL 321


>gi|34556562|ref|NP_906377.1| peptide chain release factor 2 [Wolinella succinogenes DSM 1740]
 gi|81833248|sp|Q7MAP4|RF2_WOLSU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|34482276|emb|CAE09277.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Wolinella succinogenes]
          Length = 368

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 184/344 (53%), Gaps = 14/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             ++NR  EIE         +   K     +E   +  I+ K    +Q   + ++L  + 
Sbjct: 27  DSIENRLGEIEALEHSEGFWNDATKAGEVQKEKRKLERILKKYEEANQAINDAKELFEIA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N +          +      + +    +   ++     D  + I+ I  G GG+E+ 
Sbjct: 87  TQDNDEE-----TLGLLFEESGHLEKEIKSVEIEVMLSGEHDGSNAIITIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +KVEVL   + ++ G K+    I G   +  +K E+G+HR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKVEVLDYQEGEEAGIKDASFIIKGENAYGYLKVENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS  +V V PE   +ID++I  +D+R+DT RASG+GGQHVN T+SA+R
Sbjct: 202 RISPFDANAKRHTSFTSVMVSPEVDDDIDIEIEEKDLRLDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+V   +++SQH+N+  A K+L++RLY++E  + + E  +  K +IG G    
Sbjct: 262 ITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELAKRSAEYDSMEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y  +   ++ D R N+    +E +L G +D+++  +L + 
Sbjct: 319 QIRSYVLAPYQQVKDTRSNIAYSNIEAILDGDLDELLEGVLISQ 362


>gi|322688633|ref|YP_004208367.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320459969|dbj|BAJ70589.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 374

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 105/355 (29%), Positives = 171/355 (48%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK    ++E + +     D      +  + +S   S++   +   Q   D+ T++ 
Sbjct: 25  DVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVE 84

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D +  D AQ E+  I+K++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGREEGDQDSLDEAQSEIGEIQKDLDQMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY RY     +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +DIP  DIR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G I+  I   +     +   + +E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWRHEQRRAAETE 373


>gi|291456213|ref|ZP_06595603.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213]
 gi|291381490|gb|EFE89008.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213]
          Length = 374

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 108/355 (30%), Positives = 172/355 (48%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  LK    ++E + +     D      +  + +S   S++       Q   D+ T+  
Sbjct: 25  DVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSAAESQLKRLTSASQRIDDVETLVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G    D E  D AQ E+  I+K++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGQEEQDQESLDEAQNEIGEIQKDLDQMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY RY     +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   VDIP  DIR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHVDIPDTDIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G I++ I   +     +   + +E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAGIRWRHEQRRAAENE 373


>gi|237729831|ref|ZP_04560312.1| peptide chain release factor 2 [Citrobacter sp. 30_2]
 gi|226908437|gb|EEH94355.1| peptide chain release factor 2 [Citrobacter sp. 30_2]
          Length = 310

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 167/316 (52%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E +++  I+  +    Q  ++   L  +  + + +    +       A    + +  
Sbjct: 1   MGKERSSLEAIVDTLDQMSQGLEDVSGLLELAVEADDEETFNEAV-----AELDTLEDKL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +     D   C L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+
Sbjct: 56  AQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESE 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID 214
            +  G K +   I+G   +  ++ E+GVHR+ R    ++ GR HTS ++  V PE  +  
Sbjct: 116 GEVAGIKSVTIRIAGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDI 175

Query: 215 VDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
                  D+RID  RASG+GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK 
Sbjct: 176 DIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           ++A+LY++E ++   E+    + K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 MKAKLYELEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGSLDQFIEASLKA 308


>gi|296169215|ref|ZP_06850868.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896113|gb|EFG75780.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 368

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 161/346 (46%), Gaps = 7/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L++R  ++E   S+    D         + +S    ++   ++ +Q   DL  +  
Sbjct: 24  DVDGLRSRIEKLEHEASDPQLWDDQSNAQRVTSQLSHAQGELRRIEELRQRLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +     LA+ +                   L     D++  ++ IR+G GG +AA 
Sbjct: 84  LAAEEDAADALAEADAELKALRADI--EATEVRTLLSGEYDEREALVTIRSGAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 142 WAEMLMRMYLRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 202 ISPFDNQSRRQTSFAEVEVLPVVDTTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVRL 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K + GS     +
Sbjct: 262 THIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDAL-KGEGGS-SWGNQ 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 320 MRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWRNRK 365


>gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
 gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
 gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570]
          Length = 325

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D    +
Sbjct: 1   MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+T+IPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|166795303|ref|NP_061914.3| peptide chain release factor 1-like, mitochondrial isoform a [Homo
           sapiens]
 gi|74753314|sp|Q9UGC7|RF1ML_HUMAN RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; AltName: Full=mtRF1a; Flags: Precursor
 gi|6706658|emb|CAB65994.1| mitochondrial translational release factor 1-like [Homo sapiens]
 gi|158254756|dbj|BAF83351.1| unnamed protein product [Homo sapiens]
          Length = 380

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 144/314 (45%), Positives = 207/314 (65%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K++E ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++
Sbjct: 301 EEEINKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELV 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKEYADYESLVE 374


>gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
 gi|167656758|gb|EDS00888.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
 gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           siraeum V10Sc8a]
          Length = 370

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 177/342 (51%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +LK    ++E + ++    +      +    I    + +  Y++ ++   D+ T++ 
Sbjct: 26  DLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESYDDVMTMLE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   L +I+ LA                L     D  + IL   AG GG+EA  
Sbjct: 86  LAQEEDDESMLPEIQELAKHFRTEL--ESQKLATLLSGEFDHNNAILTFHAGAGGTEAQD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  L+RMY  +A     KV VL   D ++ G K     + GR  +  +K E+GVHR+ R
Sbjct: 144 WVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENGVHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V   ++SGR HTS A+V V+PE  E  D++I  ++I++D  RASG+GGQ VN T SAVRI
Sbjct: 204 VSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKTSSAVRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+    +E+SQHQNR  AM++L+++L +++ +   ++ S  +  Q+       +
Sbjct: 264 THIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQL-QIAWGAQ 322

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR    +  +  V+ G +D  IN  L A
Sbjct: 323 IRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364


>gi|325971169|ref|YP_004247360.1| peptide chain release factor 2 [Spirochaeta sp. Buddy]
 gi|324026407|gb|ADY13166.1| peptide chain release factor 2 [Spirochaeta sp. Buddy]
          Length = 367

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 171/346 (49%), Gaps = 10/346 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             + +   ++E +  E+   D      + +A ++ +      + +      D+  ++  +
Sbjct: 26  DKMLSEIQKLETKTLEAGFWDDRKGAEQLFAQLNGLKDSYYPWKELIDSLGDMAELMEIY 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             + +  +        I +   +   ++    L     D   C L I AG GG+EA+ + 
Sbjct: 86  ADEPDNPEEEAQIDAQITQLKEQY-GQLKLKTLLDGKFDKNDCFLTIHAGAGGNEASDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY RY     +K EVL     D+GG K     +SG   F  +K E+GVHR+ R+ 
Sbjct: 145 NMLMRMYLRYCERNGFKSEVLDLL-EDEGGIKSATIRVSGPYSFGYLKGEAGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++  R HTS  +V   P     I++D+  ED R+DT RA G+GGQHVN TDSAVRITH
Sbjct: 204 PFDSQKRRHTSFTSVYASPVIDDTIEIDLKPEDYRLDTYRAGGAGGQHVNKTDSAVRITH 263

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK--RMANERSANRKLQIGSGDRSER 305
             +GI+V   +E+SQ  N+  A K+L++RLY+  R+     +++ A  K +I  G    +
Sbjct: 264 YESGIVVQCQNERSQVMNKDVAFKMLKSRLYEYYRELKEKEHQKDAIEKKEITWG---SQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y F     + DHR ++T+  ++ V+ G I D I   L   Q +
Sbjct: 321 IRSYVFQPYTMVKDHRTSVTVGNIQAVMDGEIGDFIEGYLQWAQKE 366


>gi|152991913|ref|YP_001357634.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
 gi|166225117|sp|A6Q718|RF2_SULNB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151423774|dbj|BAF71277.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
          Length = 364

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 14/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +LK R  EIE    +    +      K+++E      I+      +    +  +   + 
Sbjct: 27  DELKKRLDEIEEMQQDPNFWNDTANAGKISQEKTRTERILETYHNANDAVYDAIEYFEMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D E  ++   +   +++    LE ++          D  + I+ I  G GG+E+ 
Sbjct: 87  K-AEKDEETLEMLYEDAETLKERTNALEVQMM----LSGEHDSNNAIVSIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A    +KVEVL     ++ G K++   I G   +  +K E+G+HR+ 
Sbjct: 142 DWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLKVENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ + HTS  +V V P    +ID++I  +D+RIDT RASG+GGQHVN T+SA+R
Sbjct: 202 RISPFDSNAKRHTSFTSVMVSPEIDDDIDIEIEDKDLRIDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  AMK+L++RLY+ E  +   E     K  IG G    
Sbjct: 262 ITHEPTGIVVQCQNDRSQHKNKSAAMKMLKSRLYEYEMAKKQAEIDGVEKSDIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y      ++ D R       ++ +L G ID ++  +L + 
Sbjct: 319 QIRSYVMQPYQQVKDTRSGQAFTNVDAILDGDIDKLLEGVLISQ 362


>gi|284029674|ref|YP_003379605.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
 gi|283808967|gb|ADB30806.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
          Length = 373

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A++  +++     D      +  + +S + + +      +    DL  +I 
Sbjct: 25  DLDALRREIADLGEQVAAPDLWDDQANAQKVTSRLSSLQADVERVTNLRSRIDDLGVMIE 84

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                +D++    ++ E+ A+ K I+ LE       L     D++  ++ IR+G GG +A
Sbjct: 85  LSREENDADSLAESEKEIAALAKSIQSLEV----RTLLSGEYDEREALVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +  EV  +S  ++ G K     +     +  +  ESG HR+
Sbjct: 141 ADFAEMLQRMYLRWAERHGYPTEVYDTSYAEEAGLKSTTFGVKAPYAYGTLSVESGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P      ++D+P E++RID  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPVLEQTDEIDVPEEELRIDVYRSSGPGGQSVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTG +V   +EKSQ QN+  AM +L+A+L  +++     +  A R    GS    
Sbjct: 261 RITHLPTGTVVSCQNEKSQLQNKASAMVILKAKLLALKKAEERAQIDALRGDVQGS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +++R+Y     + + D R          V  G IDD +   +   +   
Sbjct: 319 DQMRSYVLHPYQMVKDLRTQYESGNTSGVFDGEIDDFVEAGIRWRRTGQ 367


>gi|301801602|emb|CBW34300.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200]
          Length = 325

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D    +
Sbjct: 1   MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY   
Sbjct: 61  ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+T+IPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR +  + +++ V+ G +D  I+  L   
Sbjct: 294 DHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|329946372|ref|ZP_08293939.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328527348|gb|EGF54346.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 373

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 6/349 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ R AE+  + S     D         +A+S   + +   +   +  +DL  ++   
Sbjct: 26  EALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVESLGERIEDLEAMVELA 85

Query: 70  -NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              + +       E  +    I +  +++    L     D +  ++ IR+G GG +AA F
Sbjct: 86  GEEEGDDAAEILAEAESDLTAISKDLSDLEIRTLLSGEYDPRDAVVTIRSGAGGVDAADF 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A   ++ V+VL++S  ++ G K +   +     +  +  E G HR+ R+
Sbjct: 146 AEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEVHAPYAYGTLSVEGGTHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V V+P   +   +DIP  DIRID  R+SG GGQ VNTTDSAVRIT
Sbjct: 206 SPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGPGGQSVNTTDSAVRIT 265

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTG++V+   EKSQ QNR  AM+VL++RL  ++++    ++         S    +++
Sbjct: 266 HLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKELAGDVKAS--WGDQM 323

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           R+Y  +  + + D R +  +   + V  G ID  I+  +   + +    
Sbjct: 324 RSYVLNPYQMVKDLRTSFEVGNPDSVFDGDIDGFIDAGIRWRKQQETAE 372


>gi|23465750|ref|NP_696353.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
 gi|189439805|ref|YP_001954886.1| peptide chain release factor 2 [Bifidobacterium longum DJO10A]
 gi|239622364|ref|ZP_04665395.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|296453666|ref|YP_003660809.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|312133211|ref|YP_004000550.1| prfb [Bifidobacterium longum subsp. longum BBMN68]
 gi|322690619|ref|YP_004220189.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|23326435|gb|AAN24989.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
 gi|189428240|gb|ACD98388.1| Protein chain release factor B [Bifidobacterium longum DJO10A]
 gi|239514361|gb|EEQ54228.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517272|emb|CBK70888.1| bacterial peptide chain release factor 2 (bRF-2) [Bifidobacterium
           longum subsp. longum F8]
 gi|296183097|gb|ADG99978.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|311772412|gb|ADQ01900.1| PrfB [Bifidobacterium longum subsp. longum BBMN68]
 gi|320455475|dbj|BAJ66097.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
          Length = 374

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 105/355 (29%), Positives = 171/355 (48%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK    ++E + +     D      +  + +S   S++   +   Q   D+ T++ 
Sbjct: 25  DVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVE 84

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D +  D AQ E+  I+K++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY RY     +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +DIP  DIR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G I+  I   +     +   + +E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWRHEQRRAAETE 373


>gi|160944128|ref|ZP_02091358.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444804|gb|EDP21808.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105045|emb|CBL02589.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
           prausnitzii SL3/3]
          Length = 373

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 175/352 (49%), Gaps = 10/352 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   + R  E+E  MS     D      + +  +  +  K++ +++ +    D  T++  
Sbjct: 27  IEASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLEM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + + +   + + E           E     + +     D  + IL   AGTGG+EA  +
Sbjct: 87  LDEEYDPAMIPEAEEAVNTVGKAVEEL--QLMTMLNGEYDHSNAILTFHAGTGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY ++A      VEVL   D D+ G K     + G   +  +K E+GVHR+ RV
Sbjct: 145 AEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGLKSASMMVKGANAYGLLKSENGVHRLVRV 204

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ R  TS A++ V+PE    I V+I  EDI +   R+SG+GGQH+N T SAVR+ 
Sbjct: 205 SPFDANARRQTSFASLEVMPELDNTIQVNIRPEDIEMQVYRSSGAGGQHINKTSSAVRLI 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +++SQ QNR  AM++L+A+LY + +++  ++    +  + +I  G    
Sbjct: 265 HKPTGIVVNCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWG---H 321

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +IR+Y F     + DHR N     ++ V+ G ID+ I   L A     +  A
Sbjct: 322 QIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDIDEFIFAYLKAASRGELQDA 373


>gi|28493402|ref|NP_787563.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist]
 gi|28572487|ref|NP_789267.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27]
 gi|28410619|emb|CAD67005.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27]
 gi|28476443|gb|AAO44532.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist]
          Length = 347

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 139/349 (39%), Positives = 191/349 (54%), Gaps = 15/349 (4%)

Query: 7   KQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + I  L    + IE R+S    S      L+  Y+ +S + +    + +   +      +
Sbjct: 3   ETIDTLLREHSIIEDRLSRCDASPSEMKDLSLRYSKLSRVKAAYEEFQKISLDLSAAREL 62

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
               + D        +    +      L      LL  +D +D +  I+EI+ G GG+E+
Sbjct: 63  A---DDDPGFLVEIPVLTEKLSDAQARL----QSLLTRRDENDHRDVIMEIKGGEGGAES 115

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRMKFES 180
           ALF  DL RMY  +A    WKVE+LS S+N  GGYK++   I        GV+  +K+E 
Sbjct: 116 ALFAADLLRMYAYFADSNGWKVEILSYSENTLGGYKDVQLAIRKTPSSTHGVWELLKYEG 175

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVPATE+ GR+HTS   V V PE     +++I  ++IRID  R+SG GGQ VNT
Sbjct: 176 GVHRVQRVPATESQGRIHTSTTGVLVFPEVDAPGEIEITNDEIRIDVFRSSGPGGQSVNT 235

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +EKSQ QNR  AM++LRARL    +  +     A RK QI 
Sbjct: 236 TDSAVRITHLPTGIVVSCQNEKSQIQNRESAMRILRARLIAKRQDEIEKTTHAARKSQIR 295

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + DRSERIRTYNF + R+ DHR     Y L+ VL G +  +I   + A 
Sbjct: 296 AMDRSERIRTYNFPENRVVDHRTGYKAYNLDQVLNGDVSQLIRSCIEAD 344


>gi|309791264|ref|ZP_07685795.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
 gi|308226690|gb|EFO80387.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
          Length = 361

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 164/343 (47%), Gaps = 6/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   + + + +E R +E    +           ++ +  +++ +   + +   L  +I 
Sbjct: 19  DLATKQEQISSLEERAAEPDLWNDPRTAQGVMQQLTRLKDEVAQWTNLESQLISLDELID 78

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++ +     +I       +      +    LL     DD+   + I+AG GG++A  
Sbjct: 79  LTEAEGDATLYTEIAAEVRAAQKEL--AQRELALLLSGPYDDRDAFVSIQAGMGGTDAQD 136

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   + RMY R+A  R + V ++  S  D+ G K     + G   +  ++ E+GVHR+ R
Sbjct: 137 WADMMLRMYLRWAETRGYSVTIVDMSAGDEAGIKSATLELRGPYAYGNIRAEAGVHRLIR 196

Query: 188 VPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+    TS A V V+PE  +  +V I  ED+RID  R+ G GGQ VNTTDSAVR+
Sbjct: 197 LSPFNAAHTRQTSFARVEVVPEVDDAPEVTIKPEDLRIDVFRSGGHGGQGVNTTDSAVRL 256

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QNR  AM+VLR RL + E +R   ER+  R  +        +
Sbjct: 257 THLPTGIVVTCQNERSQLQNRETAMRVLRGRLLERELQRQLEERARLR-GEHRDAAFGSQ 315

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +RTY       + DHR       +  VL G +D  I   L  +
Sbjct: 316 MRTYYLHPSTLVKDHRTEHETSNVYAVLDGQLDPFIEAYLRWN 358


>gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1]
 gi|166225112|sp|A1T6D1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
           vanbaalenii PYR-1]
          Length = 368

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 162/349 (46%), Gaps = 13/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL---HT 64
            +  L+ R  ++E   S+    D   +  +  + +S    ++   ++ +   +DL   + 
Sbjct: 24  DVDGLRGRIEQLEKDASDPQLWDDQARAQKVTSDLSHAQGELRRIEELRGRLEDLPVLYE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +     E+ +         E              L     D++  ++ IR+G GG +
Sbjct: 84  LAAEEGGSDEVAEADAELTKLREDIEAM-----EVRTLLSGEYDEREALVTIRSGAGGVD 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR
Sbjct: 139 AADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLSVEQGTHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +   R  TS A V VLP       ++IP  D+R+D  R+SG GGQ VNTTDSA
Sbjct: 199 LVRISPFDNQNRRQTSFADVEVLPVTETTDHIEIPEGDVRVDVYRSSGPGGQSVNTTDSA 258

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K   GS   
Sbjct: 259 VRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDAL-KGDGGS-SW 316

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             ++R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 317 GNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWRNRK 365


>gi|331090528|ref|ZP_08339381.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405871|gb|EGG85399.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 337

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 172/342 (50%), Gaps = 12/342 (3%)

Query: 17  AEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            E++ ++ E    +      K+  E   +   +          ++   L  ++ + N +S
Sbjct: 2   EELQKKIEEPGFWEDTETSQKIMRELKGLQSFLENAESLLTSYEDIAMLIEMVYEDNDES 61

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            + ++ +      +         I    L     D  + I+ + AG GG+E+  +   L+
Sbjct: 62  MVGEIRREIRQFEKNFEE-----IRINTLLSGPYDKDNAIVTLHAGAGGTESCDWASMLY 116

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A  + + + VL   D D  G K +   ++G   +  ++ E GVHR+ R+    +
Sbjct: 117 RMYSRWAERKGFSISVLDYLDGDITGIKTVTFEVNGENAYGYLQSEKGVHRLVRISPFNS 176

Query: 194 SGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           +G+  TS A+  V      EID++I  +D+++DT RASG+GGQHVN T SA+RITH+PTG
Sbjct: 177 AGKRQTSFASCDVIPDIEDEIDIEINEDDLKVDTYRASGAGGQHVNKTSSAIRITHLPTG 236

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           I+V   +E+SQH NR +AM++L+A+LY ++++  A++ S  R  ++       +IR+Y  
Sbjct: 237 IVVQCQNERSQHSNREKAMQMLKAKLYLIKQQEQADKVSDIR-GEVKEIGFGNQIRSYVM 295

Query: 312 SQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
                + DHR N+    +  VL G I+  IN  L       +
Sbjct: 296 QPYTLVKDHRTNVENGNVTAVLDGDIEPFINAYLKKRNEDEM 337


>gi|149184652|ref|ZP_01862970.1| protein chain release factor B [Erythrobacter sp. SD-21]
 gi|148831972|gb|EDL50405.1| protein chain release factor B [Erythrobacter sp. SD-21]
          Length = 375

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E++ R+ +    D       +T+E   +   I+ +   + +  +  +   +     
Sbjct: 30  RRLDELDARVQDPTLWDDPKQAQAITQEQKRLETAINTVREIESEMGDAMEFVEMGEAEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D  + +         ++  R          L     D     +EI AG GG+E+  +  
Sbjct: 90  DDDVVNEGLTSLSTLADRADR-----DKVQALLSGEADGNDSYIEIHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            LFRMY R+A  R +KVE +     D  G K     + G   +   K ESGVHR+ R+  
Sbjct: 145 MLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V P    +ID++I   D++IDT RASG+GGQHVNTTDSAVRITH 
Sbjct: 205 YDSSARRHTSFSSVWVYPVIDDDIDIEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHQ 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTGI+V + +++SQH+N+  AM +L+ARL++ E        S     K  IG G    +I
Sbjct: 265 PTGIVVASQNDRSQHKNKATAMNMLKARLFEREMAEREAAASGEYQEKSDIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R  +T    + VL G +D  I+  L   
Sbjct: 322 RSYVLQPYQMVKDLRTGVTSPTPDDVLDGALDPFISAALAQR 363


>gi|213692886|ref|YP_002323472.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524347|gb|ACJ53094.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459060|dbj|BAJ69681.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 374

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 11/355 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  LK    ++E + +     D      +  + +S   S++   +   Q   D+ T++ 
Sbjct: 25  DINRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVE 84

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D +  D AQ E+  I+K++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY RY     +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +DIP  DIR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G I+  I   +     +   + +E
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWRHEQRRAAETE 373


>gi|191637822|ref|YP_001986988.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23]
 gi|190712124|emb|CAQ66130.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23]
          Length = 332

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 104/335 (31%), Positives = 164/335 (48%), Gaps = 12/335 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M+E    D      +     + +  K   +   + E +DL     ++ D       ++  
Sbjct: 1   MAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDLEAGFELLQDEPDKDLQQEEE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  EK  +         LL     D  + ILEI  G GG+E+  +   L RMY+R+
Sbjct: 61  AKIKDLQEKLDK-----YEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    +KVEV      D+ G K +   I+G   +  +K E GVHR+ R+   +++GR HT
Sbjct: 116 ADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE    I+VD+  EDI+++  R+SG+GGQH+N T SAVR+ H+PTGI+  + 
Sbjct: 176 SFASVDVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +++SQ QN+  AM +L+A+LY  E +    +  A +  Q        +IR+Y F     +
Sbjct: 236 AQRSQFQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQ-KDVAFGSQIRSYVFHPYTMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            DHR N        V+ G ++  IN  L    A+ 
Sbjct: 295 KDHRTNYETGNGNAVMDGDLNPFINAYLQWELAQK 329


>gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
 gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
          Length = 338

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 100/330 (30%), Positives = 167/330 (50%), Gaps = 12/330 (3%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           RMS+    ++      +++E   +   +        +  +  +L+ +  +    S   ++
Sbjct: 2   RMSDPDFWNSPDTAKAVSQEATKLKEEVQGHDDLVNEAADLSELYDLAAEDEDTSFTGEI 61

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            +     +++  +        LLL     D  + I+   AG GG+EA  +   + RMY R
Sbjct: 62  ERQYYRLVKELEK-----REVLLLLSGEYDSCNAIMAFHAGAGGTEAQDWTQMIVRMYSR 116

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    + + ++     D+ G K    T+ G   +  +K E GVHR+ R+   + +GR H
Sbjct: 117 WAEQHGYTIRMIDYQPGDEAGTKSCAFTVEGENAYGYLKSEKGVHRLVRISPFDTNGRRH 176

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS   V V+PE   + +V+I ++D+R+D  RASG+GGQHVN T SAVR+THIPTGI+V  
Sbjct: 177 TSFTAVDVMPELPDDAEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQC 236

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-R 315
            +E+SQ QNR   MK LRA+L+++E ++    R+     Q  S +   +IR+Y F     
Sbjct: 237 QNERSQIQNREMCMKYLRAKLFELEEEKKEKLRAELTGTQ-QSIEWGSQIRSYVFHPYNL 295

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           + DHR  +    ++ V+ G ID  I   L 
Sbjct: 296 VKDHRTGVETSNIQSVMDGNIDMFIEGYLQ 325


>gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
           49726]
 gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
           49726]
          Length = 370

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 96/344 (27%), Positives = 157/344 (45%), Gaps = 10/344 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L  R  E+E +  +    D      +  + +S   +K+   +  +    D+  +    
Sbjct: 29  EALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLESLRGRLDDMPVMYELA 88

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
                  +           E+      +    +     D +  ++ IR+G GG +AA + 
Sbjct: 89  EE-----EGTVSVADEDLAELESAIESLEVTTMLSGEYDPREAVINIRSGAGGVDAADWA 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     KV++   S  ++ G K     + G  ++ ++  E G HR+ R+ 
Sbjct: 144 EMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRLS 203

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       +D+P  ++R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 204 PFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQSVNTTDSAVRLTH 263

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++R
Sbjct: 264 IPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL--GAGGNASWGNQMR 321

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y     + + D R N  +     VL G ID  +   +     +
Sbjct: 322 SYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWRMQQ 365


>gi|153952316|ref|YP_001398744.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223625|sp|A7H5G4|RF2_CAMJD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|152939762|gb|ABS44503.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 365

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 187/344 (54%), Gaps = 8/344 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R  EIE   +     +   +        + I + +  Y+       D   +    
Sbjct: 27  KNIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           NS+++I  L  +       ++ +    +   +L    +D K+ I+ I  G GG+E+  + 
Sbjct: 87  NSENDIETLQALFND--APKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R  
Sbjct: 145 SILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTS 204

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRITH
Sbjct: 205 PFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
            PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +++ K +IG G    +IR
Sbjct: 265 FPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANSSEKSEIGWG---HQIR 321

Query: 308 TYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y  F   ++ D+R      +++ +L G I  +I  +L A +A+
Sbjct: 322 SYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKAE 365


>gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
 gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 330

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 111/334 (33%), Positives = 175/334 (52%), Gaps = 18/334 (5%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQ 80
           MS+    D   K  E     + + + +  Y Q   + +D   ++       D+ +    +
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIK 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             V  I++ + + E     LLL     D  + IL   AG GG+EA  +   L RMY R+A
Sbjct: 61  QFVNGIQEAVEKQEV----LLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               + VE++     D+ G K     I G   F  +K E GVHR+ R+   +A+ R HTS
Sbjct: 117 EKTGFSVELMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTS 176

Query: 201 AATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            A V V+PE  +  +++I ++D+++DT RASG+GGQH+N TDSAVR+TH PTGI+V   S
Sbjct: 177 FAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQS 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS----GDRSERIRTYNFSQG 314
           ++SQ QNR +A+++LRA+L+++E ++ A       K QIG      +   +IR+Y F   
Sbjct: 237 QRSQMQNREQALRLLRAKLFELELEKQAEL-----KEQIGGTYQAIEWGSQIRSYVFHPY 291

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + DHR ++    ++ V+ G ID  I   L   
Sbjct: 292 NMVKDHRTSVETGNVQAVMDGNIDQFIEGYLKKE 325


>gi|289423341|ref|ZP_06425149.1| peptide chain release factor 2 [Peptostreptococcus anaerobius
           653-L]
 gi|289156272|gb|EFD04929.1| peptide chain release factor 2 [Peptostreptococcus anaerobius
           653-L]
          Length = 350

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 10/348 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK R A+I   M +    +              + SKI  YD    + +D+  +I 
Sbjct: 5   DLDSLKTRQADINASMEDQGFWEDSDHANRILQENKQLTSKIEDYDSLVGQLEDISVLIE 64

Query: 68  --DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +  SDSE     + +++A   ++ E        LL     D  + IL I +GTGG +A
Sbjct: 65  MAEETSDSEEDKTIEDQLVAYISDVNEKIVNTTMELLFSGEYDSNNAILSINSGTGGLDA 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R++  R  KV++L    + + G K     +SG   +  +K E GVHR+
Sbjct: 125 QDWAQMLLRMYIRWSEGRGLKVKLLDIISDPEAGIKTASLMVSGVNAYGYLKSEKGVHRL 184

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SG+ HTS A+V VLPE   + D++I   D++IDT R+SG+GGQHVNTTDSAV
Sbjct: 185 VRISPFDSSGKRHTSFASVDVLPEIEDDSDININPNDLKIDTYRSSGAGGQHVNTTDSAV 244

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGD 301
           RITH+PTGI+V   +E+SQ  N+  AMK+L ++L  ++ +    +    +    QI  G 
Sbjct: 245 RITHLPTGIVVQCQNERSQRINKDVAMKMLISKLIQIKEEENKEKIEDLQGKYTQISWG- 303

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
              +IR+Y F   + + DHR N     ++ V+ G +DD +   L    
Sbjct: 304 --SQIRSYVFQPYKLVKDHRTNKENTNVDAVMDGSLDDFMFEYLKKQN 349


>gi|220932479|ref|YP_002509387.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
           orenii H 168]
 gi|219993789|gb|ACL70392.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
           orenii H 168]
          Length = 331

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 114/328 (34%), Positives = 169/328 (51%), Gaps = 9/328 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MS+    D   K  E       +  +I    +  +  ++   +I     D   R+    E
Sbjct: 1   MSDPGLWDDNKKAREITRKSKVVKDRIKSLKKLDELREEAEVMIELAEEDETNRE-LWSE 59

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V      + E  +++          DD + IL I  G GG+E+  +   L RMY R+A  
Sbjct: 60  VEDYINSLEEKIDKMELKFRLNGEYDDCNAILSIHPGAGGTESQDWADMLLRMYVRWAES 119

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVE L     D+ G K +   ISG   +  +K E GVHR+ R+   ++SGR HTS A
Sbjct: 120 HGYKVETLDYLPGDEAGIKRVTLLISGEYSYGYLKGEKGVHRLVRISPFDSSGRRHTSFA 179

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE  +         D++I+T RASG+GGQHVN TDSAVRITHIPTGI+V   +E+
Sbjct: 180 SVNVIPEIDDDIEVDIDTGDLKIETYRASGAGGQHVNKTDSAVRITHIPTGIVVQCQNER 239

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG-RIT 317
           SQH+N+  AM +L+ARL +++++  A +    R    +I  G+   +IR+Y F     I 
Sbjct: 240 SQHKNKKMAMMILKARLLELKKEARAEKIEELRGENKEIAWGN---QIRSYVFHPYNLIK 296

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR  L    ++ V+ GYID+ I   L 
Sbjct: 297 DHRTGLEEGNVQKVMDGYIDEFIEAYLK 324


>gi|134097701|ref|YP_001103362.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|166225115|sp|A4F8R2|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 367

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 165/349 (47%), Gaps = 14/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI---SPIISKISIYDQKKQEEQDLHT 64
            +  L+ + AE+E   +     D         + +      + KI    Q+ ++ + L+ 
Sbjct: 24  DLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRKIKDLRQRVEDLEVLYE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   DS + +         +         +    L     D +  ++ IRA  GG +
Sbjct: 84  LSEDEGDDSGLAEADSERTKLKKDLEA-----LEVRTLLSGDYDQREAVVTIRAEAGGVD 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA F   L RMY R+A   ++ VEV  +S  ++ G K     ++    +  +  E G HR
Sbjct: 139 AADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPYAYGTLSVEQGTHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +  GR  TS A V VLP       V+IP +DIR+D  R+SG GGQ VNTTDSA
Sbjct: 199 LVRISPFDNQGRRQTSFAGVEVLPVVEETDHVEIPEKDIRVDVFRSSGPGGQSVNTTDSA 258

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPTGI+V   +EKSQ QN+  A++VL+++L   ++++   E  A +      G+ 
Sbjct: 259 VRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKLLAKKKEQERAELDALKDSGSSWGN- 317

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             ++R+Y     + + D R    +   + VL G ID  +   +   + +
Sbjct: 318 --QMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGIRWRRQQ 364


>gi|255323494|ref|ZP_05364625.1| peptide chain release factor 2 [Campylobacter showae RM3277]
 gi|255299531|gb|EET78817.1| peptide chain release factor 2 [Campylobacter showae RM3277]
          Length = 366

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 181/343 (52%), Gaps = 8/343 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             +K R  EIE   ++        K        + I + ++ +   K    D   +    
Sbjct: 27  ESIKARLKEIEEMENDQNFWQDIAKAGAIGKEKTKISNILNNFLNAKSAVDDAKELYELA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           NS+++  +     + A   E+ +    +   +L    DD K+ I+ I  G GG+E+  + 
Sbjct: 87  NSEND--EETINSLFAEADELEDKIVNLEISMLLSGEDDGKNAIVTIHPGAGGTESNDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R  
Sbjct: 145 SMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLKAENGIHRLVRTS 204

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++GR HTS  +V V P    +I+++I  +D++IDT RA G+GGQHVN T+SAVRITH
Sbjct: 205 PFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQHVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
            PTGI+V   +++SQH+N+  AMK+L++RLY++E  +      +  K +IG G    +IR
Sbjct: 265 APTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAAGSIEKSEIGWG---HQIR 321

Query: 308 TYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +Y  F   ++ D+R      + + +L G I  +I  +L + ++
Sbjct: 322 SYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQKS 364


>gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
           33030]
 gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
           33030]
          Length = 364

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 157/346 (45%), Gaps = 10/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + ++  R  E+E + ++    D           +S + +++      +Q   DL  +  
Sbjct: 24  DLDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQARVRRVRSLRQRIDDLPVMYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +                      +    +     D +  ++ IR+G GG +AA 
Sbjct: 84  LAAEEGDYTLAEDELADLTTAV-----ETLEVTTMLSGEYDQREAVVNIRSGAGGVDAAD 138

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV+V   S  ++ G K     + G  ++ ++  E G HR+ R
Sbjct: 139 WAEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVR 198

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       +DIP  +IRID  R+SG GGQ VNTTDSAVRI
Sbjct: 199 ISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIPDSEIRIDVYRSSGPGGQSVNTTDSAVRI 258

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V   +EKSQ QN+  AM VL+++L + +R+    E  A      G+     +
Sbjct: 259 THEPTGIVVTCQNEKSQIQNKASAMNVLQSKLLERKRQEEKAELDAL--GAGGNASWGNQ 316

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R N  +   + VL G ID  +   +     +
Sbjct: 317 MRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWRSTE 362


>gi|148243347|ref|YP_001228504.1| peptide chain release factor 2 [Synechococcus sp. RCC307]
 gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307]
          Length = 349

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 166/342 (48%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   ++    D      ++   +  + +++      +    D    + 
Sbjct: 1   DVPALTARQQDLEQLAAQPDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLE 60

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  D E  D    E     +E+R   +      L   T D +  ++ I AG GG++A  
Sbjct: 61  LY--DLEPDDALLEEANGGLQELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQD 118

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  R  KV V   S+ ++ G K     + GR  +  ++ E G HR+ R
Sbjct: 119 WALMLMRMYTRWAEDRGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVR 178

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+   E+D++IP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 179 ISPFNANDKRQTSFAGVEVMPKLEEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 238

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L+++L  + +++ A E +  R   I       +
Sbjct: 239 LHIPTGLAVRCTQERSQLQNKEKAMALLKSKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 297

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R N     ++ V+ G +D  I  LL  
Sbjct: 298 IRNYVFHPYQMVKDLRTNEETTDVQGVMDGDLDPFIQSLLRQ 339


>gi|257867488|ref|ZP_05647141.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
 gi|257873817|ref|ZP_05653470.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
 gi|257801544|gb|EEV30474.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
 gi|257807981|gb|EEV36803.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
          Length = 329

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 105/328 (32%), Positives = 174/328 (53%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     D   K  +   A +        ++Q  +E ++L  ++     +++    A++E
Sbjct: 1   MAHPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               +   +         +L  +  D  + I+E+  G GG+E+  +   L RMY R+   
Sbjct: 61  ARITKLNEKM--ASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++VE L     D+ G K +   + G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 119 HGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFC 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    IDV+I  +D++IDT RASG+GGQH+N T+SAVRITHIPTG +V + +++
Sbjct: 179 SVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR +AM +L+A+LY +E ++   E +A R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N     ++ V+ G +D  I+  L 
Sbjct: 296 DHRTNFETGNVQAVMDGDLDGFIDAYLK 323


>gi|284046044|ref|YP_003396384.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
 gi|283950265|gb|ADB53009.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
          Length = 372

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 163/344 (47%), Gaps = 8/344 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+   AE+E  M      D+  K  +  A  +    K+  Y     + +DL  +    
Sbjct: 34  KALEAHVAELEQEMGAPGFWDSQEKAAKTSAEHARASRKLDTYRTLVSDVEDLEPLAEMA 93

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D E+      ++ + E+ +     ++    L     D    ++ + AG GG++A  + 
Sbjct: 94  QEDPELEAELAEQIASAERRLE----QLEEERLFSGRYDGGDALVTVNAGAGGTDAQDWA 149

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             + RM  R+A  R + VE+L  S  ++ G K     + G   +     E GVHR+ R+ 
Sbjct: 150 EMVLRMEMRWAEKRGFDVELLEVSAGEEAGIKSATFRVKGENAYGLYGAEKGVHRLVRLS 209

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R  TS A V V        +V+I  +D+++DT RASG+GGQHVN TDSAVRITH
Sbjct: 210 PFDSANRRQTSFAGVEVAPVVEDAAEVEIDDDDLQVDTYRASGAGGQHVNKTDSAVRITH 269

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
            P+GI+V   +E+SQ  NR  AM +LR++L ++E +R   E +   K +    +   +IR
Sbjct: 270 RPSGIVVQCQNERSQSSNRATAMAMLRSKLVELEERRRQEEIAKE-KGEAQDVNFGSQIR 328

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y       + DHR    +     VL G +D  +   L    A+
Sbjct: 329 SYVLHPYSMVKDHRTEFEIGDTGRVLDGDLDGFVRAYLLQAAAR 372


>gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
 gi|259585228|sp|C5CGS4|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
          Length = 370

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 106/339 (31%), Positives = 180/339 (53%), Gaps = 12/339 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  +K + + IE  +S+        +  +       + S++ + ++ ++  +++   + 
Sbjct: 25  DVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNKVQELFENIDIAVE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D    +     +   E  ++E E  I          D  +  L +  G GG+E+  
Sbjct: 85  LSEEDESYLENLNELLKEAEDMVKEFELNIL----LSSPYDAYNAYLSVHPGAGGTESQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +KV  +     ++ G K     I+G   + ++K+E+GVHR+ R
Sbjct: 141 WASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKLKYEAGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ R HTS A+V+V PE  +  ++DI  ED++IDT RA G+GGQHVN T+SAVRI
Sbjct: 201 ISPFDANHRRHTSFASVSVFPEMDDDVEIDIRPEDLKIDTYRAGGAGGQHVNRTESAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           THIPTGI+V   +E+SQHQN+  AMK+L+A+L+++E ++   E+      +  I  G+  
Sbjct: 261 THIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMGEQKDIAWGN-- 318

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIIN 341
            +IR+Y F     + DHR N     ++ V+ GYIDD I 
Sbjct: 319 -QIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIE 356


>gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
          Length = 375

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 116/367 (31%), Positives = 190/367 (51%), Gaps = 33/367 (8%)

Query: 11  DLKNRFAEIE----------------LRMSESPSVDAYIK---LTEEYAAISPIISKISI 51
           D+K RF E+                   MSE        K   ++++  A+   ++  + 
Sbjct: 10  DIKKRFEELSSSIDEEKIKKEIEKYDQMMSEPDFWSDQEKAKSISQKRKALQDKLNTYTS 69

Query: 52  YDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKS 111
              + ++  ++ + + + + D+ +    ++E +  + +  ELE          D  D  +
Sbjct: 70  LKSRIKDLDEMVSELKEEDLDTTLLISEELEAVEKDLKKFELE------TYLSDEMDINN 123

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
             L I+AG GG+EA  +   L RMY R+A    ++V++   + +D  G K     I G  
Sbjct: 124 AYLTIQAGAGGTEACDWASMLLRMYTRWAEKHGYEVQLTDINPDDVAGIKSATLYIKGPY 183

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRAS 230
            +  +K E+GVHR+ R+   +A+ R HTS A+V V+PE  E  +++I  ED+RIDT RAS
Sbjct: 184 AYGYLKSENGVHRLVRISPFDANARRHTSFASVLVVPEVNEDVNIEIKEEDLRIDTYRAS 243

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQ+VN TD+AVRITHIPTGI+V    E+SQ QNR +AM++L+ARLY +E +++  ++
Sbjct: 244 GAGGQYVNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLKARLYQLELQKIEEKK 303

Query: 290 SANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +    K  IG G    +IR+Y F   + + D R       +E V+ G ID+ I   L  
Sbjct: 304 KSLEGPKTDIGWG---YKIRSYIFQPSQLVKDLRTGEESGNIEAVMDGEIDNFIEAYLRK 360

Query: 347 HQAKMIG 353
                + 
Sbjct: 361 KALNQLS 367


>gi|307718929|ref|YP_003874461.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192]
 gi|306532654|gb|ADN02188.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192]
          Length = 361

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 176/349 (50%), Gaps = 11/349 (3%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +K + + +E         +      E  + +  +  +   +    QE +D+HT+     
Sbjct: 16  SIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASLVQEVEDIHTLYDLAA 75

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +++     ++     E E +  E  +  L    +  D K   L I AG GG EA  +  
Sbjct: 76  EENDPSQEEELRQQLAEAERKFRELRLREL--LNEEYDQKDAYLTIHAGAGGMEACDWAS 133

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+   + +  +++     D+GG K +   + G   F  +K E+GVHR+ R+  
Sbjct: 134 MLLRMYLRWLERKGFSTQIVDM-VEDEGGIKSVTVEVKGDYAFGYLKGEAGVHRLVRISP 192

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +ASGR HTS A+V V P   +  +VDI  ED+RIDT R+ G+GGQHVN T+SAVRITH+
Sbjct: 193 FDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAGGQHVNKTESAVRITHL 252

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK--RMANERSANRKLQIGSGDRSERI 306
           PTGI+V   +E+SQH+NR  AM++LR+RLY+  ++      E+ A  K  I  G+   +I
Sbjct: 253 PTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKKAIEKKDISWGN---QI 309

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           R+Y F     + D R  +    ++ V+ G +D  I   L     +   +
Sbjct: 310 RSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYLLQQWKERQEA 358


>gi|223940442|ref|ZP_03632294.1| peptide chain release factor 2 [bacterium Ellin514]
 gi|223890887|gb|EEF57396.1| peptide chain release factor 2 [bacterium Ellin514]
          Length = 384

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 172/345 (49%), Gaps = 9/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +++ R  E++  M+         +  +     + +  K+    + +++ +D   +I 
Sbjct: 28  DVANVQKRLGELDSLMAGESFWSNRDQAQKLIDESNSLRKKVEPLLKAEKQLEDYKVMIE 87

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP-KDTDDDKSCILEIRAGTGGSEAA 126
              ++           +  E  +   E E   L +      D  +CIL I AG GG+E+ 
Sbjct: 88  LAEAEPAAEQEKYQNDVDRELVVFNKELENLELKVFLNGPHDKNNCILSINAGAGGTESC 147

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY+R+A LR W+VEV  +   +  G K     ISG   +   K E GVHR+ 
Sbjct: 148 DWANMLLRMYQRWAELRGWQVEVTDALPGETAGIKSATLLISGENAYGFCKAERGVHRLV 207

Query: 187 RVPATEASGRVHTSAATVA-VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS A+V  +     E ++ IP  +  +DT R+ G GGQ+VN  ++AVR
Sbjct: 208 RISPFDSNKRRHTSFASVDAIAEIEEEGEIAIPPNEFHVDTFRSGGKGGQNVNKVETAVR 267

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDR 302
           ITHIPTG++V + +++SQHQNR  AMK+L +R++      ++   ER    K  +  G+ 
Sbjct: 268 ITHIPTGLVVASQTQRSQHQNRATAMKLLLSRIFAQRLDAQKQEMERFYGEKGSVSWGN- 326

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y F   R + D R  +    ++ V+ G +D  +N  L A
Sbjct: 327 --QIRSYVFQPYRMVKDLRTGVETSDVQGVMDGDLDPYVNGWLRA 369


>gi|315606122|ref|ZP_07881153.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315312404|gb|EFU60490.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 372

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 5/348 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ + AE+  + +     D      E  +A+S   S++    Q  +   DL  ++   
Sbjct: 26  DKLREQIAELNEKAAAPDLWDDPSAAQEVTSALSHRQSELDRITQMSERIDDLEAMVEMA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D +       E     +++R+   ++    L     D+++ ++ IR+G GG +AA F 
Sbjct: 86  AEDPDEGAEILAEAEGDLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +  +V+ +S  ++ G K     +     +  +  E+G HR+ R+ 
Sbjct: 146 EILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRIS 205

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V V+P       ++IP  ++++D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 206 PFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTH 265

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V+   EKSQ QNR  A++VL++RL  +  +    ++         S    +++R
Sbjct: 266 IPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS--WGDQMR 323

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +Y     + + D R        + V  G ID  IN  +   + +   +
Sbjct: 324 SYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRKNEQNAA 371


>gi|305679674|ref|ZP_07402484.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
           14266]
 gi|305660294|gb|EFM49791.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
           14266]
          Length = 368

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 164/345 (47%), Gaps = 9/345 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            DL +R  E+  + ++    D      +  + +S +  ++      +    DL  +    
Sbjct: 26  ADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSLRSRLTDLPIMYELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             + E  D+A  E+  +  +I  LE             D +  ++ IR+G GG +AA + 
Sbjct: 86  EEEGEGTDIADEELTDLRADIDALEVTTM----LSGEYDSREALINIRSGAGGVDAADWA 141

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  +  KVEV   S  ++ G K     + G  ++  +  E GVHR+ R+ 
Sbjct: 142 EMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLSVEQGVHRLVRIS 201

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +   R  TS A V VLP       +DIP  ++R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 202 PFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQSVNTTDSAVRLTH 261

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  A++VL+A+L + +R+    E  A      G+     ++R
Sbjct: 262 IPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKRQEERAELDAL--GAGGNASWGNQMR 319

Query: 308 TYNFSQ-GRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            Y       + D R    +   + VL G +D  +   +   + + 
Sbjct: 320 NYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRKGQH 364


>gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
 gi|189040002|sp|A9BHH8|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
          Length = 366

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 104/336 (30%), Positives = 179/336 (53%), Gaps = 8/336 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  ++    +++  M E    +   +  +       +  +I  + + + + ++L   +  
Sbjct: 26  IDKVEEEVKKLDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKKLENDFEELEIAVEL 85

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D  +      +V AI K I +        +L  +  DD +  L +  G GG+E+  +
Sbjct: 86  SEDDPSM----TAQVEAILKVIEKKIGSFRLRMLLSEEYDDANAFLSLHPGAGGTESQDW 141

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    + +E +   + D+ G K     ISG   + ++K+ESGVHR+ R+
Sbjct: 142 ASMLLRMYTRWADKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKLKYESGVHRLVRI 201

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+GR HTS A+++V+PE  E  +++I  +D++IDT R+ G+GGQHVN TDSAVRIT
Sbjct: 202 SPFDANGRRHTSFASISVMPEFDENVEIEINPDDLKIDTYRSGGAGGQHVNKTDSAVRIT 261

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +E+SQHQN+  A+K+L+A+LY++E ++   E+   R  ++       +I
Sbjct: 262 HLPTGIVVAVQNERSQHQNKATALKILKAKLYELEHQKKLEEKLRLR-GEVKDISWGNQI 320

Query: 307 RTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           R+Y  +    + D R        + VL G ID+ I 
Sbjct: 321 RSYVLYPYTLVKDLRTEYETSNAQAVLDGEIDEFIE 356


>gi|255083621|ref|XP_002508385.1| predicted protein [Micromonas sp. RCC299]
 gi|226523662|gb|ACO69643.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 157/362 (43%), Positives = 236/362 (65%), Gaps = 6/362 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSE--SPSVDAYIKLTEEYAAISPIISKISIYDQKKQE 58
           M     +++  +  R   +   +     P      ++ +E A    ++   +   +++ E
Sbjct: 1   MTPALERRLEAVSARHDALVAALVADPPPRAAEIARINKELARAERVVRAYAAVKERRHE 60

Query: 59  EQDLHTVIGDHNS-DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              L  VI +    D+E+  +A+ E+  +E+    LE  + +LLLP D  DD   ILE+R
Sbjct: 61  TASLEQVIAESAGVDAEMAQMAEDELATLEETTPALEETLAHLLLPADEADDSGVILEVR 120

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EAALF  DL RMYE +A    W+ E+++++ ++ GG KE  A+++G  V+ R+K
Sbjct: 121 AGAGGDEAALFAADLLRMYEMFARKTGWRFELVAANASEAGGVKEATASLAGDDVYGRLK 180

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           FESGVHRVQRVPATE  GRVHTS A+VAVLP+A  +++DI  +D++IDTMRASG+GGQHV
Sbjct: 181 FESGVHRVQRVPATETQGRVHTSTASVAVLPQAETVELDIRDDDLKIDTMRASGAGGQHV 240

Query: 238 NTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTT+SAVRITH+PTG  +V   E+SQH+N+ +AMKVLRAR+Y++ER+++A+ R+  R+  
Sbjct: 241 NTTNSAVRITHVPTGVTVVMQDERSQHKNKEKAMKVLRARVYELERRKLADARADQRRSL 300

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           IGSGDRSER+RTYN+ +GR+ DHR+NL L  L  +L G   +  +++ L    + +++  
Sbjct: 301 IGSGDRSERVRTYNYKEGRVKDHRVNLLLNDLPGLLDGGDALTQMLDALKLEERRQLMAE 360

Query: 355 AS 356
            S
Sbjct: 361 FS 362


>gi|224438340|ref|ZP_03659267.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
 gi|313144782|ref|ZP_07806975.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
 gi|313129813|gb|EFR47430.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
          Length = 365

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 190/341 (55%), Gaps = 14/341 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L+ R  EI    S     +   K   +T+E      I+S  +    +  + ++L  + 
Sbjct: 27  DSLQKRMDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEMKAELDDAKELFEIA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   DS   +L    V +++  I+++E E+          D  + I+ I+ G GG+E+ 
Sbjct: 87  -ESEGDSSTLELLFENVESLQSHIQKVEIEVM----LSGEFDSSNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R++  R +KVE+L   D ++ G K     I G   +   K E+GVHR+ 
Sbjct: 142 DWASMLYRMYLRWSERRGFKVELLDHQDGEEAGIKGAAFIIKGENAYGYAKSENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V V PE + +ID++I  +DIRIDT RASG+GGQHVN T+SA+R
Sbjct: 202 RISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  AMK+L+++LY++ER + +   +   K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSEGVANAEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           +IR+Y  +   ++ D R N      E VL G IDD+I  +L
Sbjct: 319 QIRSYVLAPYQQVKDLRSNYATSDTEGVLDGDIDDLIESVL 359


>gi|254445589|ref|ZP_05059065.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
 gi|198259897|gb|EDY84205.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
          Length = 368

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 171/347 (49%), Gaps = 13/347 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI---SPIISKISIYDQKKQEEQDLHT 64
            +   K    E+E +MS     +         A       +++ ++ +  K  + + +  
Sbjct: 13  DVDKKKTEIGELEAQMSAEGFWNDQKAAQAVIAQANLAKGVVNGMTAFMAKLDDARAMEE 72

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   D    +  +++  A+  +    E             D  + +L + AG GG+E
Sbjct: 73  LLNEEGVDELSDEAEELQAAAVALKEELDEL--EIQCYLNKPHDRCNALLSVNAGAGGTE 130

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L+RMY R+A  R +KVEV+     ++ G  ++   I G   F     E GVHR
Sbjct: 131 SCDWAELLYRMYSRWAERRGFKVEVVDMLPGEEAGLDKVTLRIVGENAFGYANAERGVHR 190

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL-EDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   ++  R HTS   V V+ E  +        +D+R DT R+SG GGQHVN TDSA
Sbjct: 191 LVRISPFDSQKRRHTSFCAVDVVAEIEDDIEIEIEAKDLREDTYRSSGKGGQHVNKTDSA 250

Query: 244 VRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVE--RKRMANERSANRKLQIGSG 300
           VR+THIPTGI+    S++SQH+NR  AMK+L+ARLY+     KR A E+    K +IG G
Sbjct: 251 VRLTHIPTGIVAACQSDRSQHKNRSAAMKMLKARLYERMEDEKRSAMEKMYGEKGEIGWG 310

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +   +IR+Y F   + + D R  +    ++ V+ G ID  ++  L A
Sbjct: 311 N---QIRSYVFQPYQMVKDLRTGVETGNIQAVMDGDIDRFVSGWLRA 354


>gi|71043904|ref|NP_001020894.1| peptide chain release factor 1-like, mitochondrial precursor
           [Rattus norvegicus]
 gi|81907899|sp|Q4V7E5|RF1ML_RAT RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|66910900|gb|AAH97970.1| Mitochondrial translational release factor 1-like [Rattus
           norvegicus]
          Length = 373

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 145/315 (46%), Positives = 204/315 (64%), Gaps = 5/315 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            + +   + ++K++E +D  +++ D N D  ++ LA+ E+   +KEI EL++ I  LL+P
Sbjct: 56  QLAAAARLLNEKERELRDTESLLHDENED--LKKLAESEIALCQKEIAELKHRIISLLVP 113

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D    ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 114 SEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 173

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI + I  +D+R
Sbjct: 174 SASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTEIKLVINPKDLR 233

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTGI+     E+SQ +NR  AMK LRARLY +  
Sbjct: 234 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRL 293

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +    +R + RK+Q+G+  RSE+IRTYNF Q R+TDHRIN +L+ LE  +QG   +DD+I
Sbjct: 294 EEETAKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDLI 353

Query: 341 NPLLTAHQAKMIGSA 355
             L      + +   
Sbjct: 354 QSLKDYSDYESLVEM 368


>gi|30425080|ref|NP_780583.1| peptide chain release factor 1-like, mitochondrial precursor [Mus
           musculus]
 gi|81874010|sp|Q8BJU9|RF1ML_MOUSE RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|26347595|dbj|BAC37446.1| unnamed protein product [Mus musculus]
 gi|74186873|dbj|BAE20502.1| unnamed protein product [Mus musculus]
 gi|148671619|gb|EDL03566.1| mitochondrial translational release factor 1-like [Mus musculus]
          Length = 373

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 143/315 (45%), Positives = 203/315 (64%), Gaps = 5/315 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            + +   +  +K++E +D  +++ D N D  ++ LA+ E+   +K+I EL+++I  LL+P
Sbjct: 56  QLAAAARLLSEKERELRDTESLLHDENED--LKKLAESEIALCQKQITELKHQIISLLVP 113

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D    ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 114 SEEMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 173

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A++ G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI + I  +D+R
Sbjct: 174 SASVGGPEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEIKLVINPKDLR 233

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTGI+     E+SQ +NR  AMK LRARLY +  
Sbjct: 234 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMHL 293

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +    +R   RK+Q+G+  RSE+IRTYNF Q R+TDHRIN +L+ LE  +QG   +DD+I
Sbjct: 294 EEETAKRYNARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDMI 353

Query: 341 NPLLTAHQAKMIGSA 355
             L      + +   
Sbjct: 354 QSLKDCSDYEALVEM 368


>gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 (RF-2) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 369

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 97/350 (27%), Positives = 156/350 (44%), Gaps = 8/350 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +     +  E+E   S     +         + +S + S +      +    D  T++ 
Sbjct: 25  DVPAKNKQIEELETEASAPDLWNDQEHAQSVTSRLSRLQSSVEKVQTLRSRLDDASTLLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + +S+     + E            + +    L     D++  ++ IR+  GG +AA 
Sbjct: 85  LASEESDADTAQEAEKEIATLADEI--DTLEVQTLLSGEYDERDALVTIRSEAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMYER+A    +  EV   S  ++ G K    T+     +  +  E G HR+ R
Sbjct: 143 FAAMLLRMYERWAERHAYSYEVYDISYAEEAGIKSATFTVKSPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP      ++DIP +DIR+D   ASG GGQ VNTTDSAVRI
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVEETDNIDIPEKDIRVDVFHASGPGGQGVNTTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+   ++VL+A+L +  R+    E  A +      G    +
Sbjct: 263 THLPTGIVVTCQNERSQIQNKAAGLRVLQAKLLERARQEREAEMDALKSDGNSWG---SQ 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +R+Y     + + D R        + V  G ID  I   +   + +   +
Sbjct: 320 MRSYVLHPYQMVKDLRTGFESGSPDNVFDGDIDGFIERGIRWRRQEEQAA 369


>gi|157415680|ref|YP_001482936.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047182|sp|A8FNC2|RF2_CAMJ8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157386644|gb|ABV52959.1| peptide chain release factor RF-2 [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748321|gb|ADN91591.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315930963|gb|EFV09938.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           327]
          Length = 365

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 185/346 (53%), Gaps = 12/346 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
            +++ R  EIE   +         +        + I + +  Y+       D   +  + 
Sbjct: 27  ENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLA 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +  +D+E  +    +   +E  I  LE  +         +D K+ I+ I  G GG+E+  
Sbjct: 87  NSENDTETLEALFNDAPKLEDTITSLEISML----LSGENDGKNAIVSIHPGAGGTESND 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R
Sbjct: 143 WASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRI
Sbjct: 203 TSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +A  K +IG G    +
Sbjct: 263 THFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAGEKSEIGWG---HQ 319

Query: 306 IRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y  F   ++ D+R      +++ +L G I  +I  +L A +A+
Sbjct: 320 IRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKAE 365


>gi|296118845|ref|ZP_06837421.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968334|gb|EFG81583.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
           20306]
          Length = 367

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 163/349 (46%), Gaps = 14/349 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGD 68
            ++ R  E+E +  +    D      +  + +S   +K+      +   +DL  +  + +
Sbjct: 27  AMEERVRELEAQAGDPSLWDDPDHAQKVTSELSSTQAKLRKLSALRGRLEDLPVMYELAE 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D+ + D     V    + +           +     D +  ++ IR+G GG +AA +
Sbjct: 87  EEGDASLADDELDAVRDAVETLE-------VTTMLSGDYDQREAVINIRSGAGGVDAADW 139

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A     KV+V   S  ++ G K     + G  ++  +  E G HR+ R+
Sbjct: 140 AEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGTLSVEQGAHRLVRL 199

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +   R  TS A V VLP       ++IP  ++R+D  R+SG GGQ VNTTDSAVR+T
Sbjct: 200 SPFDNQNRRQTSFAEVEVLPVVEQTDSIEIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLT 259

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGIMV   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++
Sbjct: 260 HVPTGIMVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDAL--GAGGNASWGNQM 317

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           R+Y     + + D R N  +     VL G IDD +   +    A+    
Sbjct: 318 RSYVLHPYQMVKDLRTNHEVGDPSKVLGGDIDDFLEAGIRWRMAEQTAQ 366


>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 336

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 11/340 (3%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E++ + S         K  E     S I + +  + + + +  D  +++     +++
Sbjct: 2   RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             +    EV     ++ +L        L     D+ +C LEI +G GG+E+  +   L R
Sbjct: 62  --EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMR 119

Query: 135 MYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           MY R+A     +KVEV+   + +  G K  +  I G   +   K ESG+HR+ R+   +A
Sbjct: 120 MYIRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDA 179

Query: 194 SGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           +G+ HTS A+V V P   +     +  +D++IDT RASG+GGQHVN T+SAVRITHIPTG
Sbjct: 180 NGKRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTG 239

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTY 309
           ++V   + +SQH+N+  A+K+L+ RLY +E ++   + +    +K  IG G+   +IR+Y
Sbjct: 240 VVVQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGN---QIRSY 296

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
                + + D R    +  +  V  G ID  I  +LT   
Sbjct: 297 VMHPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVLTKQN 336


>gi|222148341|ref|YP_002549298.1| peptide chain release factor 2 [Agrobacterium vitis S4]
 gi|221735329|gb|ACM36292.1| peptide chain release factor 2 [Agrobacterium vitis S4]
          Length = 344

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 105/337 (31%), Positives = 166/337 (49%), Gaps = 16/337 (4%)

Query: 19  IELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
           +  +  +    +      KL  E   +   I+ +   +Q+ ++  +L  +  +   +S +
Sbjct: 4   LNNKAEDPNLWNDAAEAQKLMRERQQLEDSIAGVRRLEQQMKDNIELIEMGEEEGDESIV 63

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
           ++          +  +     +    +     D     +E+ +G GG+E+  +   L RM
Sbjct: 64  KEAEDGLKALKAESGK-----LQVEAMLSGEADGNDTYVEVHSGAGGTESQDWANMLLRM 118

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y R+A    +KVE+L   D ++ G K     + G   +  MK ESGVHR+ R+   +++ 
Sbjct: 119 YTRWAERSGFKVELLEVHDGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNA 178

Query: 196 RVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           R HTS +++ V P     I +DI   D RIDT R+SG+GGQHVNTTDSAVRITHIP+GI 
Sbjct: 179 RRHTSFSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIA 238

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNF 311
           V    E+SQH+N+ +A  +LRARLY+VE K+   A    A  K  IG G    +IR+Y  
Sbjct: 239 VSCQQERSQHKNKAKAWDMLRARLYEVELKKREEAANAEAASKTDIGWG---HQIRSYVL 295

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              + + D R  +     + VL G I   +   L   
Sbjct: 296 QPYQLVKDLRTGVESTAPDDVLNGDISPFMEAALAHR 332


>gi|119960719|ref|YP_948373.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
 gi|119947578|gb|ABM06489.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
          Length = 398

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 103/352 (29%), Positives = 164/352 (46%), Gaps = 7/352 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK   AE+  +       D         + +S   S++    +      DL  ++ 
Sbjct: 51  DVDALKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKLASRIDDLEVLVE 110

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   +A+             E       L     D++  ++ IRAG GG +AA 
Sbjct: 111 LGQDEGDEDSMAEAAKELSSIRKALAEL--EITTLLSGEYDEREAVVTIRAGAGGVDAAD 168

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +   V+ +S  ++ G K     +     F  +  E+G HR+ R
Sbjct: 169 FAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVR 228

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P       ++IP  +IR+D  R+SG GGQ VNTTDSAVR+
Sbjct: 229 ISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRL 288

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V+  +EKSQ QNR  AM+VL++RL  V++++   E+ A       S    ++
Sbjct: 289 THIPTGIVVSMQNEKSQLQNRAAAMRVLQSRLLLVKKEQQDAEKKALAGDVKAS--WGDQ 346

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +R+Y  +  + + D R    +     VL G IDD I+  +         +A+
Sbjct: 347 MRSYVLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGIRWRTGNRNAAAN 398


>gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora]
 gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora]
          Length = 354

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 166/342 (48%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK R  ++E   S+    D   +  ++   +  +  ++    Q +    D    + 
Sbjct: 7   DVPALKARQQDLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAKATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +N + +  +    E     + ++   +      L   T D    ++ I AG GG++A  
Sbjct: 67  LYNIEPD--ESMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R++     KV +   S+ ++ G K +   I G   +  ++ E G HR+ R
Sbjct: 125 WARMLLRMYTRWSEDHGMKVNICEISEGEEAGIKSVTFEIDGSYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+   +ID+ IP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLNEDIDMFIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L+A+L  + +++ A E +  R  +I       +
Sbjct: 245 LHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADIR-GEIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R N     ++ V+ G +D  I  LL  
Sbjct: 304 IRNYVFHPYQMVKDLRTNKETTDVQGVMDGDLDLFIQALLRQ 345


>gi|323172435|gb|EFZ58072.1| peptide chain release factor 1 [Escherichia coli LT-68]
          Length = 227

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 129/225 (57%), Positives = 174/225 (77%), Gaps = 2/225 (0%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HRVQRVPATE+ 
Sbjct: 1   MYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQ 60

Query: 195 GRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA+RITH+PTGI
Sbjct: 61  GRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGI 120

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFS 312
           +V    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDRS+R RTYNF 
Sbjct: 121 VVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFP 180

Query: 313 QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 181 QGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 225


>gi|148556746|ref|YP_001264328.1| peptide chain release factor 2 [Sphingomonas wittichii RW1]
 gi|148501936|gb|ABQ70190.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingomonas
           wittichii RW1]
          Length = 375

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 175/342 (51%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    D      ++  E   +   +S +   +Q++ +  +L  +    +
Sbjct: 30  RRLDELNNRVEDPKLWDDAKAAQEVMRERRRLDEAVSAVKAIEQERDDTIELIELAEAED 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             + + D  Q      E+  +          L     D  +  +E+ +G GG+E+  + G
Sbjct: 90  DTALVDDGVQALAALAERAEK-----DKIGALLAGEADANNTYIEVNSGAGGTESQDWAG 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A    +KVE++     +  G K     + G   +   K ESGVHR+ R+  
Sbjct: 145 MLQRMYARWAERHGYKVELIDFHAGEQAGIKSATLLVRGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS A+V V PE   +ID+++  +D++IDT R+SG+GGQHVNTTDSAVRITH+
Sbjct: 205 YDSAARRHTSFASVWVYPEVDDDIDIEVLEKDLKIDTYRSSGAGGQHVNTTDSAVRITHV 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERI 306
           PTGI+V   +++SQH+NR  AMK L+ARLY+ E ++   E  A    K +IG G    +I
Sbjct: 265 PTGIIVACQNQRSQHKNRAEAMKQLKARLYEQELQKREAEAMAGYAAKTEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R   T      VL G +D  +   L+  
Sbjct: 322 RSYVLQPYQMVKDLRTGTTSTAPSDVLDGDLDRFMAAALSQR 363


>gi|171741050|ref|ZP_02916857.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
           27678]
 gi|283455565|ref|YP_003360129.1| peptide chain release factor 2 [Bifidobacterium dentium Bd1]
 gi|171276664|gb|EDT44325.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
           27678]
 gi|283102199|gb|ADB09305.1| prfB Bacterial Peptide Chain Release Factor 2 (RF-2)
           [Bifidobacterium dentium Bd1]
          Length = 380

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 103/349 (29%), Positives = 170/349 (48%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  +  E+E++ +E    D      +  + +S + S++       Q   D+ T++ 
Sbjct: 29  DVDRLTAQAKELEVQAAEPGLWDDPENAQKITSKLSAVQSQLKRLSSASQRIDDVETLVE 88

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D++  + A+ E+  I  ++ ++E +           D++S ++ IR+G GG +A
Sbjct: 89  LGREEEDADTLEEAKNEIEGIRHDLDDMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 144

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K +V+ +S  ++ G K     +     + RM  E G HR+
Sbjct: 145 ADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRL 204

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +D+P  +IR+DT  +SG GGQ VNTT SAV
Sbjct: 205 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAV 264

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 265 RITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 322

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +++R+Y     + + D R      + + V  G ID  I   +     + 
Sbjct: 323 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWRHEQR 371


>gi|283956828|ref|ZP_06374302.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791689|gb|EFC30484.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 365

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 184/346 (53%), Gaps = 12/346 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
            ++K R  EIE   +         +        + I + +  Y+       D   +  + 
Sbjct: 27  ENIKTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLA 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +  +D+E  +    +   +E  I  LE  +         +D K+ I+ I  G GG+E+  
Sbjct: 87  NSENDTETLEALFNDAPKLEDTITSLEISML----LSGENDGKNAIVSIHPGAGGTESND 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R
Sbjct: 143 WASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRI
Sbjct: 203 TSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +   K +IG G    +
Sbjct: 263 THFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWG---HQ 319

Query: 306 IRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y  F   ++ D+R      +++ +L G I  +I  +L A +A+
Sbjct: 320 IRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKAE 365


>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
 gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
          Length = 336

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 11/340 (3%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E++ + S         K  E     S I + +  + + + +  D  +++     +++
Sbjct: 2   RLEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             +    EV     ++ +L        L     D+ +C LEI +G GG+E+  +   L R
Sbjct: 62  --EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMR 119

Query: 135 MYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           MY R+A     +KVEV+   + +  G K  +  I G   +   K ESG+HR+ R+   +A
Sbjct: 120 MYVRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDA 179

Query: 194 SGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           +G+ HTS A+V V P   +     +  +D++IDT RASG+GGQHVN T+SAVRITHIPTG
Sbjct: 180 NGKRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTG 239

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTY 309
           ++V   + +SQH+N+  A+K+L+ RLY +E ++   + +    +K  IG G+   +IR+Y
Sbjct: 240 VVVQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGN---QIRSY 296

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
                + + D R    +  +  V  G ID  I  +LT   
Sbjct: 297 VMHPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVLTKQN 336


>gi|290580262|ref|YP_003484654.1| putative peptide chain release factor [Streptococcus mutans NN2025]
 gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025]
          Length = 325

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 179/332 (53%), Gaps = 12/332 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +  K   ++  ++   +   +      D    D  Q E
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEED----DSLQGE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +     ++ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 57  LEEDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KV+VL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS A
Sbjct: 117 KGFKVDVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFA 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  EDI++DT R+ G+GGQ+VN   + VR+THIP+GI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           DHR N  + +++ V+ G +D  I+  L     
Sbjct: 294 DHRTNYEVSQVDRVMDGELDGFIDAFLKWRME 325


>gi|268679078|ref|YP_003303509.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617109|gb|ACZ11474.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 364

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 190/345 (55%), Gaps = 14/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            ++  R  EIE    +    +   +     +E  A++ ++++ +       +  DL+ + 
Sbjct: 27  EEIAKRLGEIEAIEQDPEFWNDAKRAAEMQKEKTALNSLLNRYTKAKNVVSDAVDLYEMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N ++ I +     +    + + +    +   ++    +D K+ I+ I  G GG+E+ 
Sbjct: 87  NAENDETTIEE-----LFNDAQRVEDHITNLEIAMMLSGENDTKNAIVSIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A    +KVEVL   + ++ G K++   ISG   +  +K E+G+HR+ 
Sbjct: 142 DWASILYRMYLRWAERSGFKVEVLDYQEGEEAGIKDVSFIISGENAYGYLKVENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS ++V V PE  +    +    D+++DT RASG+GGQHVN TDSA+R
Sbjct: 202 RISPFDANAKRHTSFSSVMVSPEVDDDIDIVLEDRDLKVDTYRASGAGGQHVNKTDSAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH+PTGI+V   +++SQH+NR  AMK+L++RLY++E ++   E+    K +IG G    
Sbjct: 262 ITHMPTGIVVQCQNDRSQHKNRASAMKMLKSRLYELELEKQQAEKDGIEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +IR+Y  +   ++ D+R N+   ++  +L G I  +I  +L A +
Sbjct: 319 QIRSYVLAPYQQVKDNRSNIAYSQVNAILDGDISKVIEDVLIAQK 363


>gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03]
          Length = 325

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 103/328 (31%), Positives = 163/328 (49%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MS+           +           I  ++    + +DL  +     +D +  + A  +
Sbjct: 1   MSDPSFWSDRKNAEKISKQARLFKESIEAWETLTSQHKDLCELQEMAAADGD--ESALSD 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +     E+ +      +  +    DD K+ IL I +G GG+EAA +   L RMY R+   
Sbjct: 59  LENEVDELTKNVESFEFRSMLDGVDDSKNAILVIHSGAGGTEAADWAEMLLRMYNRWTER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
              K +V+     ++ G K +   +SG   +  +K E+GVHR+ R+   ++ GR HTS A
Sbjct: 119 NGLKSKVMDIQPGEEAGIKGVTIEVSGEYAYGYLKAEAGVHRLVRISPFDSGGRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V P+   +I+VD+  ED++I+  RA G+GGQHVN T SAVRITH+PTGI+V   +E+
Sbjct: 179 SVFVYPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ +N+  A+KVL AR+Y   +     +       +  S D   +IR+Y F     + DH
Sbjct: 239 SQFKNKATALKVLTARVYQNIKDEENKKLKEVENSK-KSIDFGSQIRSYVFHPYNLVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N     ++ V+ G ID  I   LT  
Sbjct: 298 RTNYETGNVQAVMDGDIDKFIRAFLTLE 325


>gi|46580270|ref|YP_011078.1| peptide chain release factor 2, programmed frameshift
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|46449687|gb|AAS96337.1| peptide chain release factor 2, programmed frameshift
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233748|gb|ADP86602.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1]
          Length = 371

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 118/340 (34%), Positives = 184/340 (54%), Gaps = 16/340 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           ++R +EIE ++S   + +   KLT   +E + +   I+++   +  + +  +   +  + 
Sbjct: 31  RHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEALETCRNDVSEWLLLAEED 90

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S   +  L           + +L  E    LL    +D  + +LEI  G GG+EA  + 
Sbjct: 91  ESAEALESLE-----EQIIRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGGTEAQDWA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +K E L   D D+ G K +   I+G   +  +K E G+HR+ R+ 
Sbjct: 146 EMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLIRIS 205

Query: 190 ATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +ASGR HTS A+V V+P+   +I ++I   D+RID  R+SG GGQ VNTT SAVR+TH
Sbjct: 206 PFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRVTH 265

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSER 305
           IPTGI+    +EKSQH N+  A+++LR RLY++E +++  E+ A    K  IG G    +
Sbjct: 266 IPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIGFG---SQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           IRTY     R + DHR N  +  +E VL G +D ++   L
Sbjct: 323 IRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 362


>gi|269218746|ref|ZP_06162600.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211857|gb|EEZ78197.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 378

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 167/355 (47%), Gaps = 9/355 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI---ISKISIYDQKKQEEQDLHTVI 66
             L+ R AE+    +     D   K     + +S     + KI+       + + L  + 
Sbjct: 26  EGLRERIAELTEASAAPDLWDDQDKAQSVTSKLSHAQAELDKINAMSAALDDLETLKEMA 85

Query: 67  GDH-NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            +   SD E       ++     ++    +E+    L     D++  ++ IR+G GG +A
Sbjct: 86  DEEAGSDPETAAELYSDLERELGQVGADMSELEIRTLLSGKYDEREAVVTIRSGAGGVDA 145

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R +  +VL +S  ++ G K     +S    +  +  E+G HR+
Sbjct: 146 ADFAQILQRMYLRWAERRGYSAKVLDTSYAEEAGIKSTTFEVSAPYAYGTLSVEAGTHRL 205

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P       +D+P  DIR+D  R+SG GGQ VNTTDSAV
Sbjct: 206 VRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDVPEADIRVDVFRSSGPGGQSVNTTDSAV 265

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V+   EKSQ QNR  AM+VL++RL  ++++  A E+         S    
Sbjct: 266 RITHIPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQEEEAREKKELAGDIKAS--WG 323

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R        E V  G ID  I+  +      +     E
Sbjct: 324 DQMRSYVLQPYQMVKDLRTGYEAGNPEAVFDGDIDGFIDAGIRWRATGVKAGEGE 378


>gi|115311854|sp|Q4L4H9|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 371

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 174/345 (50%), Gaps = 17/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVI 66
            + +    E E  M+E    D   K  +      A+  +++     +++ ++      ++
Sbjct: 27  ENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELL 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +        DL          + +E  ++    LL     D  + ILE+  G GG+E+ 
Sbjct: 87  QEELDGDVKSDLE-----QNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY+RY   + +KVE +     D+ G K +   I G   +  +K E GVHR+ 
Sbjct: 142 DWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           R+   ++SGR HTS A+  V+PE      +++I  +DI +DT RASG+GGQH+N T+SA+
Sbjct: 202 RISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAI 261

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGD 301
           RITH PTGI+V   +E+SQ +NR  AMK+L+A+LY ++ +    E +  R  Q  IG G 
Sbjct: 262 RITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWG- 320

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y F     + DHR N    K++ V+ G I   I   L 
Sbjct: 321 --SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYLR 363


>gi|297679452|ref|XP_002817544.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           isoform 1 [Pongo abelii]
          Length = 380

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 144/314 (45%), Positives = 208/314 (66%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG ++ 
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRQA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  ++G   +D+++
Sbjct: 301 EEETNKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMRGDYLLDELV 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKEYADYESLVE 374


>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
 gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
 gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
 gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
          Length = 330

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 106/332 (31%), Positives = 174/332 (52%), Gaps = 14/332 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MS+    D   K  E     + + + +  Y Q   + +D + ++ +   D +   +    
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMML-EMAIDEDDLSMESEI 59

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              +++    LE     LLL     D  + IL   AG GG+EA  +   L RMY R+A  
Sbjct: 60  KEYVKQIEETLEK-QEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             + +E++     D+ G K     + G   F  +K E GVHR+ R+   +A+ R HTS A
Sbjct: 119 SGFSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
            V V+PE  +  +++I ++D+++DT RASG+GGQH+N TDSAVR+TH PTGI+V   +++
Sbjct: 179 AVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS----GDRSERIRTYNFSQG-R 315
           SQ QNR +A+++LRA+L+++E ++ A       K QIG      +   +IR+Y F     
Sbjct: 239 SQMQNREQALRLLRAKLFELELEKQAEL-----KEQIGGTYQAIEWGSQIRSYVFHPYNL 293

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + DHR ++    ++ V+ G +D  I   L   
Sbjct: 294 VKDHRTSVETGNVQAVMDGNLDPFIEGFLKKE 325


>gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
           49725]
 gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
           49725]
          Length = 367

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 96/344 (27%), Positives = 157/344 (45%), Gaps = 10/344 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L  R  E+E +  +    D      +  + +S   +K+   +  +    D+  +    
Sbjct: 26  EALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLESLRGRLDDMPVMYELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
                  +           E+      +    +     D +  ++ IR+G GG +AA + 
Sbjct: 86  EE-----EGTVSVADEDLAELESAIESLEVTTMLSGEYDPREAVINIRSGAGGVDAADWA 140

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     KV++   S  ++ G K     + G  ++ ++  E G HR+ R+ 
Sbjct: 141 EMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRLS 200

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       +D+P  ++R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 201 PFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQSVNTTDSAVRLTH 260

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+     ++R
Sbjct: 261 IPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL--GAGGNASWGNQMR 318

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y     + + D R N  +     VL G ID  +   +     +
Sbjct: 319 SYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWRMQQ 362


>gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2]
          Length = 372

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 7/357 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L    + +L++  AE+  + S     D      +  A +S     +   ++  +   D  
Sbjct: 20  LDVSDLDNLRSEVAEMTEQASAPSFWDDPDSAQKISATLSHKQGTLEKLEKFGERIDDAE 79

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I     + +     + E    +   +  E       L     D++S ++ +R+G GG 
Sbjct: 80  LIIEMSEDEGDEDSKVEAERDLKKLHDQLAEL--EISTLLNHEYDERSAVVTVRSGAGGD 137

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +A  +   L RMY R+A  R + V+ L +S  +  G K     ++    +  +  E+G H
Sbjct: 138 DATDWAQMLIRMYVRWAENRGYNVQQLDTSYAEGAGIKSATIQVNAPYAYGTLSVEAGTH 197

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +  GR  TS A V V+P   +   V+I   D+RID  R+SG GGQ VNTTDS
Sbjct: 198 RLVRISPFDNQGRRQTSFAAVEVVPLIESTDHVEIDENDLRIDVYRSSGPGGQSVNTTDS 257

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH PTG++V+  +EKSQ QNR  AM+VL++RL D++RK  A E+         S  
Sbjct: 258 AVRITHAPTGVVVSMQNEKSQIQNREAAMRVLQSRLLDLKRKEEAAEKKELAGDIKAS-- 315

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
             +++R+Y     + + D R    +     V  G +D +I   +   + + +   SE
Sbjct: 316 WGDQMRSYVTHPYQMVKDLRTGYEVNNPSNVFDGDLDGLIEAGIRWRKEQEMAEESE 372


>gi|227494927|ref|ZP_03925243.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
 gi|226831379|gb|EEH63762.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
          Length = 372

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 173/350 (49%), Gaps = 9/350 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +LK R AE+  + +     D         + +S   +++   ++  +   DL T++   
Sbjct: 26  DELKARIAELSEKAAVPDLWDNPEAAQAVTSELSHTQAELGRIEKMVERIDDLETIVEMA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D + +DL   E  A    IR+   ++    L     D++S ++ IRAG GG +AA F 
Sbjct: 86  EEDLDEKDLLLEEAEADLAGIRQALADLEIKTLLSGEYDERSAVVTIRAGAGGVDAADFA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +  +V+ +S  ++ G K     ++    +  +  E+G HR+ R+ 
Sbjct: 146 EMLLRMYLRWAERNGYPTKVMDTSYAEEAGLKSATFEVNAPYAYGTLSVEAGTHRLVRIS 205

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V V+P       ++IP  +++ID  R+SG GGQ VNTTDSAVR+TH
Sbjct: 206 PFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKIDVFRSSGPGGQSVNTTDSAVRMTH 265

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRSER 305
           IPTGI+V+  +EKSQ QNR  A++VL++RL  +  +    E  A +K   G       ++
Sbjct: 266 IPTGIVVSMQNEKSQIQNRAAALRVLQSRLLQLRHE----EEQAAKKALAGDVKASWGDQ 321

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +R+Y     + + D R +        V  G IDD IN  +   + +    
Sbjct: 322 MRSYVLQPYQMVKDLRTSHENGNTGAVFDGEIDDFINAGIRWRKDQAQEE 371


>gi|197302438|ref|ZP_03167493.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC
           29176]
 gi|197298336|gb|EDY32881.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC
           29176]
          Length = 339

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 97/335 (28%), Positives = 173/335 (51%), Gaps = 5/335 (1%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E R+ E    D      +    +  +   +   ++   + +D+  ++ D ++  +  +  
Sbjct: 2   EKRLEEPGFWDNPEVSQQVMKELKGLQDSVKEIEKLYTDYEDML-LLIDMSAGEDEEEET 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             EV    ++   +  ++    L     D  + I+ + AG GG+EA  + G L+RMY R+
Sbjct: 61  AEEVAEELQQFEAVFEQLRISTLLIGPYDRDNAIVTLHAGAGGTEAMDWTGMLYRMYSRW 120

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +++EVL   + D  G K +   + G   +  ++ E GVHR+ R+    A+G+  T
Sbjct: 121 AEKKGYELEVLDYLEGDVAGIKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNAAGKRQT 180

Query: 200 SAATVAVLPEAAEIDVDIPLED-IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+  V+P+  E       ED +RIDT R+SG+GGQH+N T SA+RITH+PTGI+V   
Sbjct: 181 SFASCDVIPDIEEDIDIEINEDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 240

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+ +AM++L+++L  ++++  A + S  R  ++   +   +IR+Y       +
Sbjct: 241 NERSQHMNKDKAMQMLKSKLLLLKQQEQAEKMSDIR-GEVSDINFGNQIRSYVMQPYTMV 299

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            DHR N  +  +  V+ G ID  IN  L+      
Sbjct: 300 KDHRTNAEISNVGAVMDGNIDPFINAYLSMDAEAQ 334


>gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
 gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
          Length = 356

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   ++    D      ++   +  + + +   +  +    D    + 
Sbjct: 7   DVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  D E  +    E      ++R   +      L     D +  +L I AG GG++A  
Sbjct: 67  LY--DLEPDEDMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  R  KV V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 125 WAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+   ++D+DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L+A+L  + +++ A E +  R   I       +
Sbjct: 245 LHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R       ++ V+ G ++  I  LL  
Sbjct: 304 IRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLEPFIQALLRQ 345


>gi|303327864|ref|ZP_07358304.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3]
 gi|302862225|gb|EFL85159.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3]
          Length = 366

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 181/347 (52%), Gaps = 16/347 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           + R  +IE  +S   + D    LT   +E   +   + +++     + + ++   +  ++
Sbjct: 27  EQRLRDIETELSRPGAWDKPEALTPVLQEKRRLEDEVGRLTRLKTCRDDMEEWLVLASEN 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
                +  L        +KE+  L +E   ++L    +D +  ILEI  G GG+E+  + 
Sbjct: 87  EDQEALESLE-----QQQKELAALLDETELVMLLSAEEDGQDAILEIHPGAGGTESQDWA 141

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L R+Y R+AA RK+ VE +     D+ G K +   ISG   F  +K E G+HR+ R+ 
Sbjct: 142 EMLLRLYTRWAARRKYAVEEMDFLPGDEAGIKSVTLRISGPHAFGFLKSERGIHRLIRIS 201

Query: 190 ATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +ASGR HTS A+V V+P+A  +I +DI   D+R D  R+SG GGQ VNTT SAVR+TH
Sbjct: 202 PFDASGRRHTSFASVDVIPDAGNDIQLDIKESDLRFDIFRSSGPGGQSVNTTSSAVRVTH 261

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
           +PTGI     +EKSQH N+  A++VLRARLY++E ++   ER A    K  I  G    +
Sbjct: 262 LPTGISAQCQNEKSQHHNKETALRVLRARLYNLELQKREAERQAEYAGKDAIAFG---SQ 318

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           IRTY     R + DHR       ++ VL G ID   +  L     + 
Sbjct: 319 IRTYTLQPYRLVKDHRTGSESGDVDAVLDGQIDQFQHDYLLYRHEQQ 365


>gi|301786516|ref|XP_002928673.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 380

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 144/315 (45%), Positives = 208/315 (66%), Gaps = 5/315 (1%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
           S +++   +  +K+QE Q+   ++ D N D  +R LA+ E+ + +KEI +L+++I  LL+
Sbjct: 62  SELLAAAKLLSEKEQELQETEHLLHDENED--LRKLAENEITSCQKEITQLKHQIILLLV 119

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
           P +  D    ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG + 
Sbjct: 120 PSEETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRH 179

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDI 222
             A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVAVLP+  EI++ I  +D+
Sbjct: 180 ASASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTEINLVINPKDL 239

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVE 281
           RIDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +NR  AMK LRA+LY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 299

Query: 282 RKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDI 339
            +   ++R + RK+Q+G+  RSE+IRTYNF Q R+TDHRIN +L+ LE  +QG   +D++
Sbjct: 300 LEEETSKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDEL 359

Query: 340 INPLLTAHQAKMIGS 354
           +  L      + +  
Sbjct: 360 VQSLKDYADYESLVE 374


>gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
 gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
 gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603]
 gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
 gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621]
 gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
 gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621]
 gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
 gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603]
 gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
          Length = 326

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 107/333 (32%), Positives = 169/333 (50%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++ +    D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKDMVGRFRQLDETFENLEMTHDLLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKTLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R++KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRRFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++++  ED++IDT RASG+GGQHVNTTDSAVRITH+PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           SE+SQ +NR  AMK+L+A+LY  + +    +    R  Q  IG G    +IR+Y F    
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N  +  ++ V+ G I+  I+  L + 
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEINPFIDAYLRSR 325


>gi|256832101|ref|YP_003160828.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
 gi|256685632|gb|ACV08525.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
          Length = 369

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 111/348 (31%), Positives = 172/348 (49%), Gaps = 15/348 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
             L  + AE+  + S     D   +  +  +A+S   +++   +  +Q   DL  ++   
Sbjct: 26  EALTAKIAELSDQASAPDLWDDPAQAQQVTSALSLAQNELKRIESMQQRIDDLEVLVEMA 85

Query: 69  -HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              +D++    A+ E  AI+K++ +LE       L     D +  ++ IRAG GG +AA 
Sbjct: 86  VEGNDADTLHEAEDEYAAIKKDLDQLEV----RTLLSGEYDAREAVVTIRAGAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +   VL +S  ++ G K     +     F  +  E+G HR+ R
Sbjct: 142 FAEMLLRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P       V+IP  +IR+D  R+SG GGQ VNTTDSAVR+
Sbjct: 202 ISPFDNQGRRQTSFAAVEVVPLIEQTDHVEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRL 261

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRS 303
           THIPTGI+V+  +EKSQ QNR  AM+VL++RL          E  A +K   G       
Sbjct: 262 THIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLL----ERQAEEKAKKKELAGDIKASWG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +++R+Y     + + D R    +     V  G+IDD I   +   ++K
Sbjct: 318 DQMRSYVLQPYQMVKDLRTEHEVGNTNAVFDGHIDDFIEAGIRWRRSK 365


>gi|169832218|ref|YP_001718200.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169639062|gb|ACA60568.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 330

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 119/337 (35%), Positives = 176/337 (52%), Gaps = 12/337 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M          +  E    ++ +  ++ ++D  +++ +D   ++       +     ++E
Sbjct: 1   METPDFWQQQERAQEVTRRLAGLRQQVEVFDTLRRDFEDAAVLLELGEEIEDPDTAREVE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               E   R    E+  LL     +   + IL + AG GG EA  +V  LFRMY R+A  
Sbjct: 61  RSLAELGRRVAALELELLLSGPYDEA--NAILSLHAGAGGLEAQDWVEMLFRMYLRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R + VEVL    +D+ G K +   +SG   +  ++ E GVHR+ R+   +A GR HTS A
Sbjct: 119 RGYAVEVLDILPDDEAGLKNVTFLVSGPMAYGYLRAEKGVHRLVRISPFDAGGRRHTSFA 178

Query: 203 TVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           ++ VLPE AE   +DI  ED+RIDT R+ G+GGQHVN TDSAVRITH+PTGI+V   +E+
Sbjct: 179 SLDVLPEVAENTAIDINPEDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVSCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ  NR  AMK+L+ARL D+E +R   E +A R  Q  I  G    +IR+Y F     + 
Sbjct: 239 SQIANRNAAMKLLKARLLDLELRRREEEIAALRGEQPDIAWG---SQIRSYVFHPYSMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           DHR       ++ V+ G ID+ I   L       +  
Sbjct: 296 DHRTKFEKGNVDAVMDGEIDEFIQAYLVW--KARLKE 330


>gi|331089985|ref|ZP_08338875.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330402899|gb|EGG82465.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 332

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 98/331 (29%), Positives = 171/331 (51%), Gaps = 6/331 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    D      +    +  +   +   ++   + +D+  +I     +       +IE
Sbjct: 1   MEEPGFWDDPEVSQQVMKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               + E    E  I  L       D  + I+ + AG GG+E+  + G L+RMY R+A  
Sbjct: 61  EELQQFEETFEELRIGTL--LTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +E L   + D  G K +   + G   +  ++ E GVHR+ R+    ++G+  TS A
Sbjct: 119 KGYSIEELDYLEGDVAGVKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFA 178

Query: 203 TVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V      +ID++I  +D++IDT R+SG+GGQH+N T SAVRITH+PTGI+V   +E+
Sbjct: 179 SCDVIPDIEEDIDIEINDDDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+ +AM++L+++LY ++++  A + S  R  ++   +   +IR+Y       + DH
Sbjct: 239 SQHMNKDKAMQMLKSKLYLMKQQEQAEKMSDIR-GEVRDINFGNQIRSYVMQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R N  +  +  V+ G ID  IN  L+A+  +
Sbjct: 298 RTNAEVSNVGGVMDGNIDPFINAYLSANTEQ 328


>gi|170782441|ref|YP_001710774.1| chain release factor 2 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157010|emb|CAQ02182.1| chain release factor 2 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 367

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 174/346 (50%), Gaps = 13/346 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+    E+  +  E    D   K  +  + +S   S++   D+ ++   DL  ++  
Sbjct: 26  VERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQRRLDDLDVLVEM 85

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E  + A +E+  I K + ELE +           D +  ++ IRAG GG +AA F
Sbjct: 86  AKDDEESAEEAVVELAGITKIMDELEVQTL----LNGEFDPRPAVVTIRAGAGGVDAADF 141

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    +   VL +S  ++ G K     I     F  +  E+G HR+ R+
Sbjct: 142 AEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTLSVEAGTHRLVRM 201

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               ++G+  TS A V V+P       ++IP  D+R+D  R+SG GGQ VNTTDSAVRIT
Sbjct: 202 SPFNSAGKRQTSFAAVEVVPLIEQTESIEIPENDMRVDVFRSSGPGGQSVNTTDSAVRIT 261

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG--SGDRSE 304
           H+PTGI+V   +EKSQ QNR  A++VL++RL  V+R+    + +A +K   G  +    +
Sbjct: 262 HLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQRE----QEAATKKELAGNITASWGD 317

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           ++R+Y  +  + + D R    +     V  G +D  I+  +   ++
Sbjct: 318 QMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRKS 363


>gi|150865313|ref|XP_001384475.2| hypothetical protein PICST_58482 [Scheffersomyces stipitis CBS
           6054]
 gi|149386569|gb|ABN66446.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 376

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 202/364 (55%), Gaps = 13/364 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L  ++   +K  F  +E +MS         +L+ +++ +S I+     Y       ++L 
Sbjct: 8   LLLERAEVMKQEFDLVEEKMSSGDF---DQELSIKFSNLSVILENYEKYTSDLSTFEELK 64

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
           ++I + N D E  + A  E       + +  + +   LLP     DK  ILE+R G GGS
Sbjct: 65  SIIVEPNQDPEFLEEAISEANVTIPHLEKSISTLQSRLLPPMKFSDKPAILEMRPGVGGS 124

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA+LF GDL +MY  +A   +WK  ++S S+ + G   E++ +I   G ++ ++ ESGVH
Sbjct: 125 EASLFAGDLMQMYINFANHMRWKYTIVSKSEGNGGFVNEVIMSIDTPGSYNVLRHESGVH 184

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQ 235
           RVQR+P+TE+ GR+HTS A + VLP+          E +      ++RIDTMRA G GGQ
Sbjct: 185 RVQRIPSTESKGRIHTSTAAIVVLPKMSDGNESSLKEDERQFAPGEVRIDTMRAGGKGGQ 244

Query: 236 HVNTTDSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTTDSAVR+ HIPTG+ V   + +SQ +N+ +A  +LRARL  +ER +   E+   R 
Sbjct: 245 HVNTTDSAVRLVHIPTGVTVMQQDERSQPKNKAKAFSILRARLAALERDKEFAEQRKMRT 304

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIG 353
            Q+ + DRS++IRTYN+ Q R+TDHR   +L+ L   + G  + DII  +        + 
Sbjct: 305 DQVTTTDRSDKIRTYNYPQNRVTDHRCGFSLHDLTGCMAGNRLMDIIEKVEEHEFESRLR 364

Query: 354 SASE 357
              E
Sbjct: 365 DLIE 368


>gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102]
 gi|81573750|sp|Q7U3W6|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102]
          Length = 374

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 90/342 (26%), Positives = 161/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK R  ++E   ++    D      ++   +  + +++           D    + 
Sbjct: 25  DVPALKARQQDLEQLAAQPDFWDDQQAAQKQMRRLDEVKAQLQQLADWGGAVDDAKATLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  + +   L + +    +       +      L     D +  +L I AG GG++A  
Sbjct: 85  LYELEPDEEMLTEAQEGLNQLRQGL--DRWELERLLSGDYDKEGAVLTINAGAGGTDAQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV V   S+ ++ G K     + GR  +  ++ E G HR+ R
Sbjct: 143 WAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A + V+P+  E  D+DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 203 ISPFNANDKRQTSFAGIEVMPKIDEEVDIDIPEKDLEVTTSRSGGAGGQNVNKVETAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L+A+L  + +++ A E +  R   I       +
Sbjct: 263 LHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 321

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R +     ++ V+ G +D  I+  L  
Sbjct: 322 IRNYVFHPYQMVKDLRTSEETNDVQAVMDGALDPFIDASLRQ 363


>gi|84502908|ref|ZP_01001021.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
 gi|84388891|gb|EAQ01761.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
          Length = 374

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 124/349 (35%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           ++R  E   R+ +    D   K          ++  I+++D  +QE  D   +I     +
Sbjct: 29  QHRLEEFNARVEDPNLWDDPEKAQALMKDRQALVDSIAVHDSIRQELSDNAELIELGEME 88

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            +   +A+ E      + R  E E+  LL  +   +     LEI AG GG+EA  +   L
Sbjct: 89  DDQEVVAEAETALRALKERAAEKELEALLNGEADSN--DTFLEINAGAGGTEACDWAQML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  R +KVE+ S     + G K     I+G   +  +K ESGVHR+ R+    
Sbjct: 147 QRMYVRWAEKRGYKVELQSEEPGAEAGIKSCAYKITGHNAYGWLKSESGVHRLVRISPFG 206

Query: 193 ASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
             G   TS A+V V P     ID+D+   DIRIDT R+SG+GGQHVNTTDSAVRITH PT
Sbjct: 207 K-GTRETSFASVWVYPVVDDNIDIDVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHHPT 265

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSSEKSQHQNR  AMK L++RLY +E  R     +   + + GS     +IR+Y  
Sbjct: 266 GIVVTSSEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHENK-GSAGWGNQIRSYVL 324

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA--KMIGSASE 357
              + + D R        + VL G +D  +   L    +      +A+E
Sbjct: 325 QPYQMVKDLRTEHETSDTQGVLDGNLDGFMAATLAMDVSGKSRAEAAAE 373


>gi|281345517|gb|EFB21101.1| hypothetical protein PANDA_018665 [Ailuropoda melanoleuca]
          Length = 379

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 144/315 (45%), Positives = 208/315 (66%), Gaps = 5/315 (1%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
           S +++   +  +K+QE Q+   ++ D N D  +R LA+ E+ + +KEI +L+++I  LL+
Sbjct: 62  SELLAAAKLLSEKEQELQETEHLLHDENED--LRKLAENEITSCQKEITQLKHQIILLLV 119

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
           P +  D    ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG + 
Sbjct: 120 PSEETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRH 179

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDI 222
             A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVAVLP+  EI++ I  +D+
Sbjct: 180 ASASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTEINLVINPKDL 239

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVE 281
           RIDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +NR  AMK LRA+LY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 299

Query: 282 RKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDI 339
            +   ++R + RK+Q+G+  RSE+IRTYNF Q R+TDHRIN +L+ LE  +QG   +D++
Sbjct: 300 LEEETSKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDEL 359

Query: 340 INPLLTAHQAKMIGS 354
           +  L      + +  
Sbjct: 360 VQSLKDYADYESLVE 374


>gi|227497420|ref|ZP_03927652.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
           15434]
 gi|226833096|gb|EEH65479.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
           15434]
          Length = 374

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 99/351 (28%), Positives = 162/351 (46%), Gaps = 10/351 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVI 66
             L+ R AE+  + +     D         + +S   + +   +       DL     + 
Sbjct: 26  QALRARIAELSEQAAAPDLWDDPDAAQVVTSNLSHAQADLKRVEDLGSRIDDLEAMVEMA 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
           G+   D     LA+ E           E       L     D +  ++ IR+G GG +AA
Sbjct: 86  GEEEGDDAAELLAEAESDLASISKDLSEL--EIRTLLSGEYDQRDAVVTIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            F   L RMY R+A    +  +VL +S  ++ G K +   +     +  +  E G HR+ 
Sbjct: 144 DFAEMLLRMYLRWAERHGYATKVLDTSYAEEAGLKSVTFEVHAPYAYGTLSVEGGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V V+P   +   +++P  DIRID  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQGRRQTSFAAVEVIPLIESTDHIEVPETDIRIDVFRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH+PTG++V+   EKSQ QNR  AM+VL++RL  ++++    ++         S    +
Sbjct: 264 ITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKELAGDVKAS--WGD 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ++R+Y  +  + + D R +  +   + V  G ID  I+  +   + +    
Sbjct: 322 QMRSYVLNPYQMVKDLRTSYEVGNPDSVFDGDIDGFIDAGIRWRKQQEQAE 372


>gi|166154673|ref|YP_001654791.1| peptide chain release factor 2 [Chlamydia trachomatis 434/Bu]
 gi|238687385|sp|B0B832|RF2_CHLT2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|165930661|emb|CAP04158.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           434/Bu]
          Length = 368

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 11/344 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              +N   E+E +  +    D   +  +    I+ +  ++S +++ K +   +   + D 
Sbjct: 26  EGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDE 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S  ++    ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V
Sbjct: 86  ESSKDLEMQKELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWV 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             + RMY R+A+   W+VEV+   D +  G K I   + G   +   K ESGVHR+ R+ 
Sbjct: 144 EMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ + HTS A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH
Sbjct: 204 PFDSNAKRHTSFASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITH 263

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSER 305
            PTGI+V   +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +
Sbjct: 264 FPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           IR Y F     + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 321 IRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 364


>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
 gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
          Length = 330

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 108/334 (32%), Positives = 174/334 (52%), Gaps = 18/334 (5%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQ 80
           MS+    D   K  E     + + + +  Y Q   + +D + ++       D  +    +
Sbjct: 1   MSDPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDRSLEGEIK 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
             V  IE+ + + E     LLL     D  + IL   AG GG+EA  +   L RMY R+A
Sbjct: 61  DYVQQIEETVEKQEV----LLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
               + +E++     D+ G K     I G   F  +K E GVHR+ R+   +A+ R HTS
Sbjct: 117 EKAGFSIELMDEQPGDEAGTKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTS 176

Query: 201 AATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            A V V+PE  +  +++I ++D+++DT RASG+GGQH+N TDSAVR+TH PTGI+V   +
Sbjct: 177 FAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQT 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS----GDRSERIRTYNFSQG 314
           ++SQ QNR +A+++LRA+L+++E ++ A       K QIG      +   +IR+Y F   
Sbjct: 237 QRSQMQNREQALRLLRAKLFELELEKQAEL-----KEQIGGTYQAIEWGSQIRSYVFHPY 291

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + DHR  +    ++ V+ G +D  +   L   
Sbjct: 292 NLVKDHRTGVETGNVQSVMDGNLDQFMEGFLKKE 325


>gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C]
 gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C]
          Length = 369

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 156/346 (45%), Gaps = 8/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETLRGRIDDLAVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 +   LA+ E   +       E  +    L      ++  ++ IRA  GG +A+ 
Sbjct: 85  LAQEMDDADTLAEAEAELVSVRKALDE--MEVRTLLSGEYAEREALVNIRAEAGGVDASD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +  E+  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 143 FAERLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       V+I   ++R+D  RASG GGQ VNTTDSAVRI
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVETSDHVEIDESELRVDVYRASGPGGQGVNTTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQ QN+  AM VL+A+L +  R+       A +    G      +
Sbjct: 263 THIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQARMDALKD---GGSSWGNQ 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +   + VL G ID  +   +   + +
Sbjct: 320 MRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRKQQ 365


>gi|15836107|ref|NP_300631.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
 gi|8978947|dbj|BAA98782.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
          Length = 350

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 105/350 (30%), Positives = 167/350 (47%), Gaps = 11/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 +   +     +E   SE       +   +    I  +  +I  Y + K +   +
Sbjct: 1   MRGLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAI 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              + D ++  +       ++        +         L     D  SC L I AG GG
Sbjct: 61  EFFLEDADALEDPA--ICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +E+  +V  LFRMY R+A   +W +EV+   D +  G K +    SG   +   K E GV
Sbjct: 119 TESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +++G+ HTS A+V V PE  +   ++I   D+RIDT R+SG+GGQHVN T+
Sbjct: 179 HRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTE 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIG 298
           SAVRITH+P+G++V   +E+SQ QNR   MK+L+A+LY    +    ++S +RK   +I 
Sbjct: 239 SAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIA 298

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTA 346
            G    +IR Y F     + D R       ++ +L G  +D+ I   L  
Sbjct: 299 WG---SQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLAE 345


>gi|169630559|ref|YP_001704208.1| peptide chain release factor 2 [Mycobacterium abscessus ATCC 19977]
 gi|238688912|sp|B1MEU8|RF2_MYCA9 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169242526|emb|CAM63554.1| Peptide chain release factor 2 (PrfB) [Mycobacterium abscessus]
          Length = 367

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 170/348 (48%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+ R   +E   ++    D   +  +  + +S    ++   ++ +    DL  +  
Sbjct: 24  DVDGLRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEELRSRLDDLPVLYE 83

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + + + D+ +   A  E + + ++I  +E       L     D++  ++ IR+G GG +A
Sbjct: 84  LAEESEDNSVVAEADAERVKLREDIEAMEV----RTLLSGEYDEREAVVTIRSGAGGVDA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+
Sbjct: 140 ADWAEMLMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAV
Sbjct: 200 VRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDLRVDVYRSSGPGGQSVNTTDSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V   +EKSQ QN++ AM+VL+ARL + +R+    E  A  K   GS    
Sbjct: 260 RLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQARLLERKRQEERAEMDAL-KGDGGS-SWG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +     VL G ID  I   +     +
Sbjct: 318 TQMRSYVLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGIRWRNRR 365


>gi|114052078|ref|NP_001039843.1| peptide chain release factor 1-like, mitochondrial precursor [Bos
           taurus]
 gi|122135943|sp|Q2KI15|RF1ML_BOVIN RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|86826548|gb|AAI12807.1| Mitochondrial translational release factor 1-like [Bos taurus]
          Length = 380

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 144/314 (45%), Positives = 206/314 (65%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++   +   K+QE Q+   ++ D N D  +R LA+ E+ + EKEI +L+++I  LL+P
Sbjct: 63  ELVAVAKLLSDKEQELQETQHLLHDENED--LRKLAENEITSCEKEIAQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D    ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTGI+     E+SQ +N+  AMK LRA+LY ++ 
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   ++R   RK+QIG+  RSE+IRTYNF Q R+TDHRIN +L+ LE  +QG   +D+++
Sbjct: 301 EEETSKRYNARKIQIGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDELV 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKDYANYESLVE 374


>gi|57168993|ref|ZP_00368122.1| peptide chain release factor 2 [Campylobacter coli RM2228]
 gi|305432246|ref|ZP_07401409.1| peptide chain release factor RF2 [Campylobacter coli JV20]
 gi|57019659|gb|EAL56348.1| peptide chain release factor 2 [Campylobacter coli RM2228]
 gi|304444594|gb|EFM37244.1| peptide chain release factor RF2 [Campylobacter coli JV20]
          Length = 365

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 186/346 (53%), Gaps = 12/346 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
            +++ R  EIE   +     +   +        + I + +  Y+       D   +  + 
Sbjct: 27  ENIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLA 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +  +D+E  +    +   +E  I  LE  +         +D K+ I+ I  G GG+E+  
Sbjct: 87  NSENDTETLEALFNDAPKLEDTITSLEISML----LSGENDGKNAIVSIHPGAGGTESND 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R
Sbjct: 143 WASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRI
Sbjct: 203 TSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +A  K +IG G    +
Sbjct: 263 THFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAGEKSEIGWG---HQ 319

Query: 306 IRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y  F   ++ D+R      +++ +L G I  +I  +L A +++
Sbjct: 320 IRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKSE 365


>gi|226305794|ref|YP_002765754.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
 gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
 gi|259585230|sp|C0ZXD0|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
 gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
          Length = 368

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 14/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD---LHT 64
            + +L+ R  E+E + ++    +      +  + +S   +++      ++   +   L+ 
Sbjct: 24  DVEELRRRIDELEHQAADPGLWNDQEHAQQVTSQLSHAQAELRRIVALRERLDEMPILYE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D   D+        +  A    +R+    +    +     D++  ++ IR+G GG +
Sbjct: 84  LAEDEGPDA------VADADAERASLRDDIAAMEVKTMLSGEYDERDALINIRSGAGGID 137

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA +   L RMY R+A    + VEV  +S  ++ G K     I G   +  +  E G HR
Sbjct: 138 AADWAEMLMRMYIRWAEKHDYGVEVYDTSYAEEAGLKSATFAIKGPYTYGTLSVEMGTHR 197

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +  GR  TS A V VLP       ++I   DIR+D  R+SG GGQ VNTTDSA
Sbjct: 198 LVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEINENDIRVDVYRSSGPGGQSVNTTDSA 257

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+THIPTGI+V   +EKSQ QN++ AM+VL+A+L  V+R+    E  A  K   GS   
Sbjct: 258 VRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLAVKRQEERAEMDAL-KGDSGS-SW 315

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             ++R+Y     + + D R    +     VL G ID  +   +    ++
Sbjct: 316 GNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLEAGIRWRMSE 364


>gi|296483896|gb|DAA26011.1| peptide chain release factor 1-like, mitochondrial precursor [Bos
           taurus]
          Length = 380

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 144/314 (45%), Positives = 206/314 (65%), Gaps = 5/314 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++   +   K+QE Q+   ++ D N D  +R LA+ E+ + EKEI +L+++I  LL+P
Sbjct: 63  ELVAVAKLLSDKEQELQETQHLLHDENED--LRKLAENEITSCEKEIAQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D    ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTGI+     E+SQ +N+  AMK LRA+LY ++ 
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   ++R   RK+QIG+  RSE+IRTYNF Q R+TDHRIN +L+ LE  +QG   +D+++
Sbjct: 301 EEETSKRYNARKIQIGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDELV 360

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 361 QSLKDYANYESLVE 374


>gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205]
          Length = 356

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 158/345 (45%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---T 64
            +  LK R  ++E   S+    D       +   +  + +++    Q K    D      
Sbjct: 7   DVAALKARQQDLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAEATVE 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           + G    D  + +             R          L   T D +  ++ I AG GG++
Sbjct: 67  IYGLEPDDELLSESDAALKKLRADLDRW-----ELERLLSGTYDKEGAVISINAGAGGTD 121

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A     KV V   SD ++ G K     I GR  +  ++ E G HR
Sbjct: 122 AQDWALMLMRMYTRWAEDHGMKVTVDELSDGEEAGIKSCTIEIEGRYAYGYLRNEKGTHR 181

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    A+ +  TS A V V+P+  E   +DIP +D+ I T R+ G+GGQ+VN  ++A
Sbjct: 182 LVRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI HIPTG+ V  + E+SQ QN+ +AM +L A+L  + +++ A E +  R   I     
Sbjct: 242 VRILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIR-GDIVEAAW 300

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR Y F   + + D R       ++ V+ G +D  I  LL A
Sbjct: 301 GNQIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLLHA 345


>gi|309777858|ref|ZP_07672804.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914419|gb|EFP60213.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 327

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 90/327 (27%), Positives = 161/327 (49%), Gaps = 12/327 (3%)

Query: 25  ESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           +               +   I  I+      +   +  ++ H ++ +   D         
Sbjct: 4   QDDFWSDPQHAQTLIRQLNGIKDIVESYEKLNSALEGLEETHDLLKEDYDDEIFELFEAE 63

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
            +     E+ +  ++    +L     D  S ILE+  G GG+E+  +   L+RMY R+A 
Sbjct: 64  YM-----EMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWAE 118

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            + +KV VL     ++ G K +   + G   +  +K E GVHR+ R+   ++ GR HTS 
Sbjct: 119 KKGFKVSVLDYLPGEEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTSF 178

Query: 202 ATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A++ V+P+  +  +++I  ED+ ++T RASG+GGQH+N TDSAVR+ H PTG++    + 
Sbjct: 179 ASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQNG 238

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQH+NR  A++VL++RLY    +    + +  +  Q  + +   +IR+Y F     + D
Sbjct: 239 RSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEQKAN-EWGSQIRSYVFHPYSMVKD 297

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLT 345
           HR +     ++ V+ G +D  I   L 
Sbjct: 298 HRTSCETSDVQGVMDGDLDAFIFAYLK 324


>gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
 gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
          Length = 361

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/348 (25%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
            +  L+ + +++E   ++    D         +E   +   + ++  +     +      
Sbjct: 16  DVPALQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAVAALE 75

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     +S +++ +       ++  +          L   T D    +L I AG GG++
Sbjct: 76  LVELEPDESLLQEASDNLKQLDQQLSQW-----ELEQLLSGTYDRNGAVLTINAGAGGTD 130

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A    +KV +   S+ D+ G K     I GR  +  ++ E G HR
Sbjct: 131 AQDWAEMLLRMYTRWAEQHGYKVHLAELSEGDEAGIKSATLEIDGRYAYGYLRSEKGTHR 190

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    A+G+  TS A V V+P+      ++IP +D+ I T R+ G GGQ+VN  ++A
Sbjct: 191 LVRISPFNANGKRQTSFAGVEVMPQLDHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETA 250

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI H+PTG+ V  + E+SQ QN+ +A+ +L+A+L  + +++ A E +  R   +     
Sbjct: 251 VRIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADIRGDAVE-AAW 309

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
             +IR Y F   + + D R  +    +E V+ G +D+ I   L     
Sbjct: 310 GTQIRNYVFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYLRQENQ 357


>gi|256828464|ref|YP_003157192.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
           baculatum DSM 4028]
          Length = 369

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 124/337 (36%), Positives = 187/337 (55%), Gaps = 10/337 (2%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K R  EIE ++S   + D    LT      + + S++  ++   Q   +    +   +++
Sbjct: 31  KERLNEIEKQISSPGAWDKPELLTPVLQEKTQLESRVDEWEALLQARDNALEWVEMASTE 90

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
              +++ Q    A+E+   +LE       L  D +D    ILEI  G GG+E+  +   L
Sbjct: 91  Q-TQEMLQALEEALEEMSAKLEA-AQMRTLLSDPEDVSEAILEIHPGAGGTESQDWAEML 148

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A    +KVE+L     D+ G K +   I G   + ++K E G HR+ R+   +
Sbjct: 149 LRMYRRFAERVGFKVELLDLLPGDEAGIKSVTLHIHGPYAYGQLKGEKGTHRLIRISPFD 208

Query: 193 ASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +SGR HTS A+V V P+A  +I+++I  ED+R+D  R+SG GGQ VNTTDSAVR+THIPT
Sbjct: 209 SSGRRHTSFASVDVYPDAGQDIEIEIRDEDVRVDIFRSSGPGGQSVNTTDSAVRVTHIPT 268

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRT 308
           G++    +EKSQH+N+  AMKVL+ARLY++E +++A+ER A    K  I  G    +IRT
Sbjct: 269 GLVAQCQNEKSQHKNKEAAMKVLKARLYELELQKIASERQAEYVAKGAIAFG---SQIRT 325

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           Y     R + DHR       ++ VL G ID  I+  L
Sbjct: 326 YTLQPYRLVKDHRTGTDTSNVDSVLDGNIDAFIHNYL 362


>gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
          Length = 367

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLEKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETLRGRIDDLAVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 +   LA+ E           E  +    L     D++  ++ IRA  GG +A+ 
Sbjct: 85  LAEEMDDPDTLAEAEAELTSVRKALDE--MEVRTLLSGEYDEREALVNIRAEAGGVDASD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +  EV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 143 FAERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V +LP   +   V+I   ++R+D  RASG GGQ VNTTDSAVRI
Sbjct: 203 ISPFDNQGRRQTSFAGVEILPVVESSDHVEIDESELRVDVYRASGPGGQGVNTTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L + +R+    +  A +      G+   +
Sbjct: 263 THLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERQRQEERAKMDALKDSGSSWGN---Q 319

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +   + VL G ID  +   +   + +
Sbjct: 320 MRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLEAGIRWRKQQ 365


>gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus]
          Length = 453

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 163/341 (47%), Gaps = 5/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L    A++E + +++   D   K  +   A++ +  KI +    K + ++  T++  
Sbjct: 103 LLQLDQELADLESKAADNSFWDDRSKAQKVLMAMTDVKDKIKMLTDFKTQVEEAETIVKL 162

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 +      E   I K++ +  ++     L     D +  ++ I AG GG++A  +
Sbjct: 163 TEEMDSVDVGLLEEATKIIKDLNKALDQFELSELLSGPYDKEGAVISISAGAGGTDAQDW 222

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     I GR  +  +  E G HR+ R 
Sbjct: 223 ADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKSATIEIEGRYAYGYISGEKGTHRIVRQ 282

Query: 189 PATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               + G   TS + V V+P      ++V++P ED+ I   RA G GGQ+VN  ++AVRI
Sbjct: 283 SPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGGQNVNKVETAVRI 342

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG+ V  + E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 343 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQ 401

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR Y F   + + D R       +  V+ G ++  I   L 
Sbjct: 402 IRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPFIKAYLK 442


>gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
 gi|254790911|sp|B8G607|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
          Length = 367

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 172/351 (49%), Gaps = 12/351 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           H  +   +    ++E+R S+    +      +L +    +   ++  +  D +     +L
Sbjct: 22  HLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDLDHRMTSLAEL 81

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      +S   DLA        +  +         +L     DD+   L I+AG GG
Sbjct: 82  IELAEQEGDESLAADLAAELRAVQREVAQ-----RELEILLSGPYDDRDAFLSIQAGMGG 136

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           ++A  +   L RMY R+A  R + V ++  S+ ++ G K     I G   +   + E+GV
Sbjct: 137 TDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYARAEAGV 196

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+    A+    TS A V V+PE  +  +V+I  ED+RID  R+ G GGQ VNTTD
Sbjct: 197 HRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKPEDLRIDVFRSGGHGGQGVNTTD 256

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTGI+V   +E+SQ QNR  A++VLRARL + E +R A ER+  R  +    
Sbjct: 257 SAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLR-GEYREA 315

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
               ++RTY       + DHR +     ++ VL G ID  I   L A+  +
Sbjct: 316 AFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLRANVRE 366


>gi|86149455|ref|ZP_01067686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|86151896|ref|ZP_01070109.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88596537|ref|ZP_01099774.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148925627|ref|ZP_01809315.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205356111|ref|ZP_03222878.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218563058|ref|YP_002344837.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|315124892|ref|YP_004066896.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|24638160|sp|Q9PMK5|RF2_CAMJE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|85840237|gb|EAQ57495.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85841004|gb|EAQ58253.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88191378|gb|EAQ95350.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360764|emb|CAL35563.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145845637|gb|EDK22728.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205345954|gb|EDZ32590.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|284926663|gb|ADC29015.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315018614|gb|ADT66707.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315927400|gb|EFV06738.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315930833|gb|EFV09825.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 365

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 184/346 (53%), Gaps = 12/346 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
            +++ R  EIE   +         +        + I + +  Y+       D   +  + 
Sbjct: 27  ENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLA 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +  +D+E  +    +   +E  I  LE  +         +D K+ I+ I  G GG+E+  
Sbjct: 87  NSENDTETLEALFNDAPKLEDTITSLEISML----LSGENDGKNAIVSIHPGAGGTESND 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R
Sbjct: 143 WASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRI
Sbjct: 203 TSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +   K +IG G    +
Sbjct: 263 THFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWG---HQ 319

Query: 306 IRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y  F   ++ D+R      +++ +L G I  +I  +L A +A+
Sbjct: 320 IRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKAE 365


>gi|166155548|ref|YP_001653803.1| peptide chain release factor 2 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|238687484|sp|B0BC97|RF2_CHLTB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|165931536|emb|CAP07112.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 368

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 11/344 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              +N   E+E +  +    D   +  +    I+ +  ++S +++ K +   +   + D 
Sbjct: 26  EGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDE 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S  ++    ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V
Sbjct: 86  ESSKDLEMQKELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWV 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             + RMY R+A+   W+VEV+   D +  G K I   + G   +   K ESGVHR+ R+ 
Sbjct: 144 EMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ + HTS A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH
Sbjct: 204 PFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITH 263

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSER 305
            PTGI+V   +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +
Sbjct: 264 FPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           IR Y F     + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 321 IRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 364


>gi|148272488|ref|YP_001222049.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830418|emb|CAN01353.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 367

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 174/346 (50%), Gaps = 13/346 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+    E+  +  E    D   K  +  + +S   S++   D+ ++   DL  ++  
Sbjct: 26  VERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQRRLDDLDVLVEM 85

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E  + A +E+  I K + ELE +           D +  ++ IRAG GG +AA F
Sbjct: 86  AKDDEESAEEAVVELAGITKIMDELEVQTL----LNGEFDPRPAVVTIRAGAGGVDAADF 141

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    +   VL +S  ++ G K     I     F  +  E+G HR+ R+
Sbjct: 142 AEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTLSVEAGTHRLVRM 201

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               ++G+  TS A V V+P       ++IP  ++R+D  R+SG GGQ VNTTDSAVRIT
Sbjct: 202 SPFNSAGKRQTSFAAVEVVPLIEQTESIEIPENEMRVDVFRSSGPGGQSVNTTDSAVRIT 261

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG--SGDRSE 304
           H+PTGI+V   +EKSQ QNR  A++VL++RL  V+R+    + +A +K   G  +    +
Sbjct: 262 HLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQRE----QEAATKKELAGNITASWGD 317

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           ++R+Y  +  + + D R    +     V  G +D  I+  +   ++
Sbjct: 318 QMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRKS 363


>gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1]
 gi|123339715|sp|Q0S2Q6|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1]
          Length = 368

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L+ R  E+E + ++    +      +  + +S   +++   ++ +    D+  +  
Sbjct: 24  DVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEELRTRLDDMPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +               +E       +    +     D++  ++ IR+G GG +AA 
Sbjct: 84  LAEDEGADAIADADAERHSLRED---IAAMEVKTMLSGEYDERDALVNIRSGAGGVDAAD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    + VEV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 141 WAEMLMRMYVRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTLSVEMGTHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       +D+   D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 201 ISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQSVNTTDSAVRL 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN++ AM+VL+A+L +V+RK    E  A  K   GS     +
Sbjct: 261 THIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEVKRKEERAEMDAL-KGDGGS-SWGNQ 318

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +     VL G ID  +   +     +
Sbjct: 319 MRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLESGIRWRMRE 364


>gi|256826989|ref|YP_003150948.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641]
 gi|256583132|gb|ACU94266.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641]
          Length = 364

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 167/345 (48%), Gaps = 8/345 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   K R AE++ + ++    D   +        S I + +  Y+       D    +  
Sbjct: 23  IDARKQRLAELDQQTAQPGFWDDIDRAQAVSKEASDIRTLLDTYEHAHTLLDDWRCALDL 82

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D +       E      E+  L ++        +  D+  CI+ I  G+GG EA  +
Sbjct: 83  AQDDPDFA----TEAQKAADELSRLLDDFEIESWFGNRFDEGDCIVTINPGSGGLEAQDW 138

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              LF MY +YA  R WKV VL +   +  G +     I GR  +  ++ E GVHR+ R+
Sbjct: 139 CDMLFHMYTKYAENRGWKVRVLDAPLGEVIGIEHASFQIEGRFAYGMLRSEIGVHRLVRI 198

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
             T+   R HT+ A+V V+P    +I+V++   D+R+D  RASG GGQ VNTTDSAVR+T
Sbjct: 199 SPTDDKKRRHTTFASVEVMPVLPDDIEVNLNPADVRVDVYRASGPGGQCVNTTDSAVRLT 258

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG +V   ++KSQ QN+  A ++LRARL+++E ++   E  A R  +        +I
Sbjct: 259 HIPTGTVVTCQNQKSQLQNKEAAFRILRARLFELEERKRQEEIEALR-GEKRENSFGSQI 317

Query: 307 RTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R Y  +    + D R  +    ++ VL G +D  +      + ++
Sbjct: 318 RNYVLYPYQMVKDLRSGIETGNVDAVLGGDLDQFVIGYHRWNASR 362


>gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str.
           JGS1721]
 gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str.
           JGS1721]
          Length = 323

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 163/326 (50%), Gaps = 9/326 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-DHNSDSEIRDLAQI 81
           M E+   D   K  E       +  KI  +    +   D+  +      +D E       
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKEIIS 60

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           EV A+ KEI  L        +     D    IL +  G GGS+A  +   L RMY R+  
Sbjct: 61  EVKALSKEIDTL----KIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCE 116

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            +++ +E +     D+ G K +   + G   +  +K E G+HR+ R+    A+G+  TS 
Sbjct: 117 KKEYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 176

Query: 202 ATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V VLPE  ++ D++I   D+RIDT RA G+GGQHVN T+SAVRITHIPTGI+V   +E
Sbjct: 177 ASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNE 236

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQ  NR  AM +L+++L +++ +R   E+  +   ++       +IR+Y F     + D
Sbjct: 237 RSQFSNRDTAMGMLKSKLIELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKD 295

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLL 344
           HR N     +  V+ G ID+ I   L
Sbjct: 296 HRTNFETSNVNGVMDGDIDNFIIAYL 321


>gi|54020410|ref|YP_115756.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 232]
 gi|61214589|sp|Q601F9|RF1_MYCH2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|53987583|gb|AAV27784.1| peptide chain release factor 1 (RF-1), peptide termination factor
           [Mycoplasma hyopneumoniae 232]
          Length = 361

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 151/349 (43%), Positives = 234/349 (67%), Gaps = 8/349 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  +  ++ +++  +     ++   +   + +E A+I+ II     +   ++  +D  T+
Sbjct: 9   LMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVLEDAKTI 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D E+  LA++E+  + K I E E ++  L+LPKD +D+K  I+EIR   GG EA
Sbjct: 69  LIQE-DDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEA 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +FVGDLF+MY ++A  +K KV+VLSSS    GG+ +I+  ISG+ ++S++KFESGVHRV
Sbjct: 128 NIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRV 187

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVPATE  GR+HTS ATV V+P+  E  +++I   D++IDT R+SG+GGQ VNTTDSAV
Sbjct: 188 QRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAV 247

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V +  E+SQ  N+  AM +L++++Y++E ++   ++S  RKL  GSG RS
Sbjct: 248 RITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLA-GSGARS 306

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           E+IRTYN+ Q R+TDHRIN +   L+ ++QG ++ II  LL   + ++I
Sbjct: 307 EKIRTYNYPQDRLTDHRINFSTS-LKPIIQGNLNPIIEALLAQEKTELI 354


>gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016]
 gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
 gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
 gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
 gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           reuteri DSM 20016]
 gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
 gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
 gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
          Length = 332

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 106/337 (31%), Positives = 171/337 (50%), Gaps = 16/337 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M++    +   +  +  A  + +  K   +   + +  DL     ++     D   ++  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAVEPDDDLQKEFE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  +   +          L     D K+ ILEI  G GG+EA  +   L RMY R+
Sbjct: 61  ASFTNTQKALEQ-----YRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                + VE  S    D+ G K +   I G   F  ++ E GVHR+ R+   +A+GR HT
Sbjct: 116 GEQHGFSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE    ++VDI   D+R+DT R+SG+GGQH+N T+SAVRITHIPTGI+  + 
Sbjct: 176 SFASVDVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR+ AM +L+++LY++E ++ A +R+     Q  IG G    +IR+Y F    
Sbjct: 236 AERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWG---SQIRSYVFHPYT 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + D+R     +  + V+ G +D  I+  L    ++ 
Sbjct: 293 LVKDNRTGYETHNGQAVMDGDLDPFIDAFLQWKLSQK 329


>gi|149744102|ref|XP_001501636.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Equus caballus]
          Length = 380

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 142/303 (46%), Positives = 204/303 (67%), Gaps = 5/303 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++   +  +K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELVAVARLLSEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  ++   ILE+ AG GG EA LF  ++F MY+RYAA ++W  E L    ++ GG +  
Sbjct: 121 SEETNENDLILEVTAGVGGQEAMLFTSEIFDMYQRYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +NR  AMK LRA+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMHV 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   ++R   RK+QIG+  RSE+IRTYNF Q R+TDHRIN +L+ LE  +QG   +D+++
Sbjct: 301 EEETSKRYNARKVQIGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGENLLDELV 360

Query: 341 NPL 343
             L
Sbjct: 361 QSL 363


>gi|147732321|sp|Q68X96|RF2_RICTY RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 178/347 (51%), Gaps = 14/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            I  L  R  E+E   ++    +            + I  K+++++  K   +D+  +  
Sbjct: 24  DIESLTIRLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELEA 83

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  +D E  +  + +   +     +LE       L  D  D  +C LEI AG GG+E+
Sbjct: 84  MAEVENDFETLNQIEQDFKKLSIIAAKLET----ECLFSDESDYNNCFLEINAGAGGTES 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   + RMY R+A    +K ++++  + ++ G K     I G+  +   K E+GVHR+
Sbjct: 140 HDWASIMMRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAV
Sbjct: 200 VRISPFNAAGKRMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGD 301
           RITHIPT  +    S++SQH+N+ +AMK+L+A+LY +E ++  +  ++    K     G 
Sbjct: 260 RITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWG- 318

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y     + + D R +      + VL G +++ ++  L  +
Sbjct: 319 --HQIRSYVLQPYQIVKDLRTDYETSDTKGVLDGNLENFVSASLAMN 363


>gi|188586825|ref|YP_001918370.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351512|gb|ACB85782.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 344

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 189/351 (53%), Gaps = 15/351 (4%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           ++ R  E+E +M+E    D      K+T+E   +   + +I   D+ K E   +  +  +
Sbjct: 1   MEKRLKELEKQMTEPGFWDDQDRAKKVTQERQELKEHLDEIKELDELKDEVSVMIELSEE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             +D         E+     +  E  +EI    + KD  D+ + I+ + AG GG+E+  +
Sbjct: 61  DETDG----TNMKEIKQALFQFEEQLSEIRLKNMLKDRYDENNAIISLHAGAGGTESQDW 116

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           V  L RMY R+   R +  E L     D+ G K +   + G+  F  +K E+GVHR+ RV
Sbjct: 117 VEMLHRMYIRWMEHRGFNYETLDFLPGDEAGVKSVTMMVKGKYAFGYLKSEAGVHRLVRV 176

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS A++ V+P    +I++DI  +D++IDT RASG+GGQHVNTTDSAVRIT
Sbjct: 177 SPFDSSGRRHTSFASMDVVPEIDDDIEIDIKDDDLKIDTYRASGAGGQHVNTTDSAVRIT 236

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           H PTGI+V   +E+SQH+NR  AMK+L+A+L  +E ++   E+ A R  K +I  G    
Sbjct: 237 HHPTGIVVQCQNERSQHKNREVAMKILKAKLAAIEEEKRRQEQEAMRGDKKEIAWG---S 293

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +IR+Y F     + DHR NL     + VL G +D  I   L       +  
Sbjct: 294 QIRSYVFHPYTMVKDHRTNLEEGNADAVLDGKLDHFIQEYLKQRMNDRMSQ 344


>gi|312601125|gb|ADQ90380.1| Peptide chain release factor 1 [Mycoplasma hyopneumoniae 168]
          Length = 357

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 151/349 (43%), Positives = 233/349 (66%), Gaps = 8/349 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  +  ++ +++  +     ++   +   + +E A+IS II     +   ++  +D  T+
Sbjct: 5   LMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLEDAKTI 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D E+  LA++E+  + K I E E ++  L+LPKD +D+K  I+EIR   GG EA
Sbjct: 65  LIQE-DDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEA 123

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +FVGDLF+MY ++A  +K KV+VLSSS    GG+ +I+  ISG+ ++S++KFESGVHRV
Sbjct: 124 NIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRV 183

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVPATE  GR+HTS ATV V+P+  E  +++I   D++IDT R+SG+GGQ VNTTDSAV
Sbjct: 184 QRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAV 243

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+  +  E+SQ  N+  AM +L++++Y++E ++   ++S  RKL  GSG RS
Sbjct: 244 RITHIPTGIVATSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLA-GSGARS 302

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           E+IRTYN+ Q R+TDHRIN +   L+ ++QG ++ II  LL   + ++I
Sbjct: 303 EKIRTYNYPQDRLTDHRINFSTS-LKPIIQGNLNPIIEALLAQEKTELI 350


>gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [NC10 bacterium 'Dutch
           sediment']
          Length = 334

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 106/332 (31%), Positives = 167/332 (50%), Gaps = 16/332 (4%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            +             ++ +E  A+  ++ ++     +  +   L  ++ +      +++L
Sbjct: 1   MLHSQEFWADTSRAREIMKEQRALKDVVDQLVAIGGELDDLAVLLGLLREEEDPQALKEL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
                    + +      +       +  D  + IL I  G GG+E+  +   L RMY R
Sbjct: 61  ESS-----LRSLEGQIGALELTTFMAEEYDSGNAILSINPGAGGTESQDWAQMLLRMYLR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +K E++     ++ G K    T+SG+  + R+K E GVHR+ R+   +A+ R H
Sbjct: 116 WAETGSYKTEIIDLLPAEEAGIKSATVTVSGKYAYGRLKAEIGVHRLVRISPFDANHRRH 175

Query: 199 TSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V V PE  E     I  +D+RIDT R+SG+GGQHVN TDSAVRITH+PT I+V  
Sbjct: 176 TSFASVFVYPEIDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTNIVVSC 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            +E+SQH+N+  AMKVLRARLYD  R+    E +     K  I  G    +IR+Y  +  
Sbjct: 236 QNERSQHKNKAMAMKVLRARLYDHYRREQEKEMAKLEGEKKDIAWG---SQIRSYVLAPY 292

Query: 315 R-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           + + DHR  L    ++ VL G I+  I+  L 
Sbjct: 293 QLVKDHRTGLETSNVDKVLDGEIEPFIDAFLM 324


>gi|114798643|ref|YP_760613.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
           neptunium ATCC 15444]
 gi|123128746|sp|Q0C0Y0|RF2_HYPNA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|114738817|gb|ABI76942.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
           neptunium ATCC 15444]
          Length = 368

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 161/338 (47%), Gaps = 12/338 (3%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            R  E+          D   +          +   I++    +++  D   ++     D+
Sbjct: 30  KRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQTLEKDVADAPELMELAEGDA 89

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            +    +  +            E     L     D   C L+I AG GG+E+  +   L 
Sbjct: 90  SMLADLEATLRRAAARA----AEAELAALLSGEADGNDCYLQINAGEGGTESQDWASILR 145

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A  R + VE+L   D ++ G K     I G   +  +K E GVHR+ R+   ++
Sbjct: 146 RMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWLKSEQGVHRLVRISPFDS 205

Query: 194 SGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           S R HTS ++VAV P    +IDV+I   D+R DT RASG+GGQHVN TDSAVR+THIPT 
Sbjct: 206 SARRHTSFSSVAVSPVIDDKIDVEINPSDVRTDTYRASGAGGQHVNRTDSAVRLTHIPTN 265

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTY 309
            +V   + +SQHQNR  A K+LR++LY++E ++      A    K  IG G    +IR+Y
Sbjct: 266 TVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYADKSAIGFG---HQIRSY 322

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                + + D R  +       VL G ID  ++  L A
Sbjct: 323 VLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALAA 360


>gi|87300848|ref|ZP_01083690.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
 gi|87284719|gb|EAQ76671.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
          Length = 355

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   S+    D   +  ++   +  + +++    Q +    D    + 
Sbjct: 7   DVPALNARQQDLEQLASQPDFWDDQQQAQKQMRQLDEVKAQLEQLQQWRTAVDDARATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  D E  +    E     + ++   +      L     D +  ++ I AG GG++A  
Sbjct: 67  LY--DLEPDEELLSEANGGLQSLKAALDRWELERLLSGPYDKEGAVISINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 125 WALMLMRMYTRWAEDHGMKVSVDELSEGEEAGIKSCTIEIDGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+   ++ +DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLEEDVKLDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTG+ V  + E+SQ QN+ +AM +L A+L  + +++ A+E +  R   I       +
Sbjct: 245 LHVPTGLAVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRASEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R  +    ++ V+ G +D  I  LL  
Sbjct: 304 IRNYVFHPYQMVKDLRTAVETTDVQGVMDGDLDPFIQALLRQ 345


>gi|312278454|gb|ADQ63111.1| Bacterial peptide chain release factor 2 (BRF-2) [Streptococcus
           thermophilus ND03]
          Length = 326

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/333 (31%), Positives = 179/333 (53%), Gaps = 12/333 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    +  I   +    ++ +  K   ++  K+   +    +     D    D  Q E
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETELYLEMLEED----DSVQEE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +    +++ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY+RY   
Sbjct: 57  LEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K +     G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E +A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           DHR    + +++ V+ G I+  I+  L     +
Sbjct: 294 DHRTGYGVAQVDKVIDGDIEGFIDAYLKWRMEE 326


>gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4]
 gi|254790919|sp|C1B1L3|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4]
          Length = 368

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L+ R  E+E + ++    +      +  + +S   +++   ++ +    D+  +  
Sbjct: 24  DVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEELRTRLDDMPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +               +E       +    +     D++  ++ IR+G GG +AA 
Sbjct: 84  LAEDEGAEAIADADAERHSLRED---IAAMEVKTMLSGEYDERDALVNIRSGAGGVDAAD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    + VEV  +S  ++ G K     +     +  +  E G HR+ R
Sbjct: 141 WAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTLSVEMGTHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       +D+   D+R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 201 ISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQSVNTTDSAVRL 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN++ AM+VL+A+L +V+RK    E  A  K   GS     +
Sbjct: 261 THIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEVKRKEERAEMDAL-KGDGGS-SWGNQ 318

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +     VL G ID  +   +     +
Sbjct: 319 MRSYVLHPYQMVKDLRTEYEVNNPSSVLDGDIDGFLESGIRWRMRE 364


>gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 332

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/337 (31%), Positives = 174/337 (51%), Gaps = 16/337 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M+     +   +  +     + +  +   +   + +  DL     ++ +   D   ++L 
Sbjct: 1   MTAPDFWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDDLQKELD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q        ++ +   +     L     D  + ILEI  G GG+EA  +   L RMY R+
Sbjct: 61  QK-----LPQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + VE  +    ++ G K +   I G   F  +  E GVHR+ R+   +A+GR HT
Sbjct: 116 ADQHSFDVETAAYEAGEEAGIKSVTLLIKGHNAFGYLHPEKGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE    ++VDI   D+R+DT R+SG+GGQH+N T+SAVRITH+PTGI+  + 
Sbjct: 176 SFASVDVMPELDESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVTSSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR+ AM +L+++LY++E+++ A +R+     Q  IG G    +IR+Y F    
Sbjct: 236 AERSQLQNRVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWG---SQIRSYVFHPYT 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + D+R     +  + V+ G +D  IN  L    +K 
Sbjct: 293 LVKDNRTGYETHDGQSVMDGDLDPFINAYLQWQLSKK 329


>gi|210631232|ref|ZP_03296815.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
 gi|210160119|gb|EEA91090.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
          Length = 376

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 109/350 (31%), Positives = 172/350 (49%), Gaps = 11/350 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I + + R  E+E   +     D         A ++ +   + + D+  +   D    +  
Sbjct: 30  IEEARGRVTELEEASAAPGFWDDAEAARAYMAELAQVKGDVGLVDRAHERLSDARAALEL 89

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            +   +       E  A  +E+    +E+          D  S IL I+ G GG EA  +
Sbjct: 90  ADEMGQDGAEFIAEAAAAAEELTRAIDEMELSSWFTGEFDHGSAILSIKPGQGGLEAQDW 149

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              LF+MY +Y A R WKV V      +  G      T+ G+  F  ++ E+GVHR+ R+
Sbjct: 150 TFMLFKMYMKYFARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGMLRAEAGVHRLVRI 209

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
             T+A  R  T+ A V V+P    +I++++  +DIR+D   ASG GGQ VNTTDSAVR+T
Sbjct: 210 SPTDAKKRRQTTFAGVEVIPVLPDDIEIEVAPDDIRVDVYHASGPGGQGVNTTDSAVRVT 269

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           HIPTGI+V   +E+SQ QN+   M++L+ARLY++E ++ A      R  K +IG G+   
Sbjct: 270 HIPTGIVVTCQNERSQIQNKAACMQILKARLYELELEKRAETLDEIRGPKTEIGFGN--- 326

Query: 305 RIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTA--HQAK 350
           +IR+Y  +    + D R  +    ++ VL  G +D  I         QA+
Sbjct: 327 QIRSYVLYPYQMVKDLRSGVETSNVDSVLEDGDLDPFIIGYHRWATEQAE 376


>gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
 gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
          Length = 332

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/334 (31%), Positives = 172/334 (51%), Gaps = 10/334 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     D   +  E+ AA++ +  +   +   + + ++L        ++ +     + E
Sbjct: 1   MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPE--LKAE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +      ++E         L     D    ILEI  G GG+EA  +   L RMY R+A  
Sbjct: 59  LDNNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             + VE  +    ++ G K +   I G   +  +  E GVHR+ R+   +++ R HTS A
Sbjct: 119 HGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+P     I+V+I   D+R+DT RASG+GGQH+N T+SAVRITH+PTGI+  + +E+
Sbjct: 179 SVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ QNR+ AM +L+++LY++E ++ A ER+     Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWG---SQIRSYVFHPYTLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           D R     + +  V+ G +D  IN  L  + A+ 
Sbjct: 296 DARTGYETHDVIGVMDGDLDPFINAYLQWNLAQK 329


>gi|315658891|ref|ZP_07911758.1| peptide chain release factor RF2 [Staphylococcus lugdunensis
           M23590]
 gi|315496015|gb|EFU84343.1| peptide chain release factor RF2 [Staphylococcus lugdunensis
           M23590]
          Length = 334

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 170/338 (50%), Gaps = 17/338 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I       D + ++      ++ +   +    +L
Sbjct: 1   MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
               +   +K  +         LL     D  + ILE+  G GG+E+  +   L RMY+R
Sbjct: 61  EMNVLAFNDKLDQ-----FELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y     +KVE +     D+ G K +   + G   +  +K E GVHR+ R+   +ASGR H
Sbjct: 116 YCEQNGFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRH 175

Query: 199 TSAATVAVLPEA--AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+    EI+++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V 
Sbjct: 176 TSFASCDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              + DHR N    K++ V+ G I   I   L     +
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIGPFIEAYLRQQMDQ 330


>gi|24379740|ref|NP_721695.1| peptide chain release factor 2 [Streptococcus mutans UA159]
 gi|24377701|gb|AAN59001.1|AE014966_11 putative peptide chain release factor (RF-2) [Streptococcus mutans
           UA159]
          Length = 325

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 180/332 (54%), Gaps = 12/332 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +  K   ++  ++   +   +      D    D  Q E
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEED----DSLQGE 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +     ++ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY R+   
Sbjct: 57  LEEDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KV+VL     D+ G K +  +  G+  +  +K E GVHR+ R+   +++ R HTS A
Sbjct: 117 KGFKVDVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFA 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           +V V+PE    I+VDI  EDI++DT R+ G+GGQ+VN   + VR+THIP+GI+V S+ ++
Sbjct: 177 SVEVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E  A +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           DHR N  + +++ V+ G +D  I+  L     
Sbjct: 294 DHRTNYEVSQVDRVMDGELDGFIDAFLKWRME 325


>gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
 gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
 gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
          Length = 368

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 165/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDRMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKTEALRARIDDLGVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D++    A+ E+ A+ K + E+E       L     D++  ++ IRA  GG +A
Sbjct: 85  LAEAEDDADTLAEAETELAAVRKALDEMEV----RTLLSGEYDEREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           + F   L RMY R+A    +  E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 SDFAERLQRMYMRWAERHGYATEIYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       V+I   ++R+D  RASG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEVLPVVEQSDHVEIDETELRVDVYRASGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V   +E+SQ QN+  AM VL+A+L +  R+       A +    G     
Sbjct: 261 RITHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQARMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   + VL G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAAIRWRRRQ 366


>gi|330817652|ref|YP_004361357.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
 gi|327370045|gb|AEA61401.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
          Length = 299

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           ++ ++  D   ++ QDL  +  + N +  +           ++        I +  +  +
Sbjct: 1   MTTLTTLDGDLRDAQDLFELAREENDEDTLLASEGEAAELEKRVAE-----IEFRRMFSN 55

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K    
Sbjct: 56  PADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEESDGDVAGIKNATI 115

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            ++G   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V++   D+RI
Sbjct: 116 KVTGDYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRI 175

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RLY+ E +
Sbjct: 176 DTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMR 235

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+    + K  +G G    +IR+Y   Q R+ D R N+ +     VL G +DD I 
Sbjct: 236 KRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTRAVLDGDLDDFIG 292

Query: 342 PLLTA 346
             L  
Sbjct: 293 ASLKQ 297


>gi|302820696|ref|XP_002992014.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
 gi|300140136|gb|EFJ06863.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
          Length = 382

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 94/351 (26%), Positives = 169/351 (48%), Gaps = 5/351 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L    +   +   A++E + S+    +   K  +  + ++ I  ++++Y   + +  D 
Sbjct: 26  LLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTFRAKVDDA 85

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++             ++E       I    +      L   T D +   + I AG GG
Sbjct: 86  QCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARITITAGAGG 145

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           ++A  +   L RMY+R+A    +K  V+ SS  ++ G K     I GR  +  +  E G 
Sbjct: 146 TDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGYISGEKGT 205

Query: 183 HRVQRVPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           HR+ R     + G   TS A V V+P  E +EI+V+IP  D+ I T R+ G GGQ+VN  
Sbjct: 206 HRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKGGQNVNKV 265

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AVR+THIPTGI +  S E+SQ QN+++A+ +L+++L  +   + A E    R   +  
Sbjct: 266 ETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVILEDQRAAEIKEIR-GDVVK 324

Query: 300 GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +  ++IR Y F   + + D R N+    +  ++ G ++ ++   L + Q+
Sbjct: 325 AEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSKQS 375


>gi|149924687|ref|ZP_01913037.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1]
 gi|149814444|gb|EDM74035.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1]
          Length = 354

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 175/346 (50%), Gaps = 18/346 (5%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            + R  E E+   +    +      K+  E + +  ++ +I    Q   + ++L+ +  +
Sbjct: 12  KRERLEEYEIATGDPSFWEDNERAQKILREQSTLKKLVEQIDDVQQTIDDGRELYELGRE 71

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            +    I +           +   L  ++ +  +   T D+ S +L I AG GG ++  +
Sbjct: 72  ESDTESIVEA-----WENLGQADALLGKLEFRRMLSGTHDEDSALLSINAGAGGVDSQDW 126

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R+   + + V+VL   + D  G +     I G   +  ++ E GVHR+ R+
Sbjct: 127 AEMLLRMYQRWGERQGFDVKVLDIQEGDQAGIRGADLAIEGDYAYGWLRSEIGVHRLVRI 186

Query: 189 PATEASGRVHTSAATVAVLP---EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
              ++  R  TS A++ VLP   +  + ++++   D+R+D  RASG+GGQHVN T+SAVR
Sbjct: 187 SPFDSQARRQTSFASIMVLPDLGDGKDFEIEVNPADLRVDKYRASGAGGQHVNKTESAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           +TH PTGI+V    E+SQH+N   AM++L+A+L+D+E++R ++E SA    K  I  G  
Sbjct: 247 LTHEPTGIVVACQMERSQHKNMATAMRMLKAKLWDLEQQRRSDEISALEGDKKAIEWG-- 304

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y      ++ DHR  L    ++ VL G +   +   L   
Sbjct: 305 -SQIRSYVIHPYQQVNDHRTELKQGNVDAVLDGDLGSYMEAFLLMQ 349


>gi|262377202|ref|ZP_06070427.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
 gi|262307940|gb|EEY89078.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
          Length = 310

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/316 (33%), Positives = 161/316 (50%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +++ +     + ++ Q L  +  + + +S + D+      A      E  
Sbjct: 1   MAKEKGELENVLNVLDRLSTQLEDAQALLDLAVEADDESLLEDVQ-----AELSTAEEEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C LEI+AG+GG+EA  +   L RMY R+     +K EV+  SD
Sbjct: 56  AKLEFRRMFNNPMDPNPCYLEIQAGSGGTEAQDWASMLLRMYLRWIERHGFKAEVMEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V V PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +++I   D+R DT RASG+GGQH+N TDSAVR+TH PTGI+V   +++SQH NR  A K 
Sbjct: 176 EIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E  +         + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRAKLYELEMSKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDKFIEASLKQ 308


>gi|293189308|ref|ZP_06608031.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
 gi|292821771|gb|EFF80707.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
          Length = 373

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 96/349 (27%), Positives = 166/349 (47%), Gaps = 5/349 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ + AE+  + +     D         +A+S   S++    Q  +   DL  ++   
Sbjct: 26  DKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERIDDLEAMVDMA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D +       E  A  +++R+   ++    L     D+++ ++ IR+G GG +AA F 
Sbjct: 86  AEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +  +V+ +S  ++ G K     +     +  +  E+G HR+ R+ 
Sbjct: 146 EILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRIS 205

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V V+P       ++IP  ++++D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 206 PFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTH 265

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V+   EKSQ QNR  A++VL++RL  +  +    ++         S    +++R
Sbjct: 266 IPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS--WGDQMR 323

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +Y     + + D R        + V  G ID  IN  +   + +   + 
Sbjct: 324 SYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRKNEQKAAQ 372


>gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
 gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
          Length = 332

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 112/334 (33%), Positives = 178/334 (53%), Gaps = 10/334 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    +   +  +  A  + +  K   +   + +  DL T I     + +  DL +  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDD-DLQRDF 59

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
            ++  K  + LE      LL  + D  K+ ILEI  G GG+EA  +   L RMY R+   
Sbjct: 60  EVSFTKTQKALEQYRLTQLLDGEYDA-KNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             + VE  S    D+ G K +   I G   F  ++ E GVHR+ R+   +A+GR HTS A
Sbjct: 119 HGFSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    ++VDI   D+R+DT R+SG+GGQH+N  +SAVRITHIPTGI+  + +E+
Sbjct: 179 SVDVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVTSSQAER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ QNR+ AM +L+++LY++E ++ A +R+     Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWG---SQIRSYVFHPYTLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           D+R     +  + V+ G +D  I+  L    ++ 
Sbjct: 296 DNRTGYETHNGQAVMDGDLDPFIDAFLQWKLSQK 329


>gi|121612135|ref|YP_001001104.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005998|ref|ZP_02271756.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166223626|sp|A1W163|RF2_CAMJJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|87249819|gb|EAQ72778.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 365

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 184/344 (53%), Gaps = 8/344 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R  EIE   +         +        + I + +  Y+       D + +    
Sbjct: 27  ENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDANELFDLA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           NS+++   L  +       ++ +    +   +L    +D K+ I+ I  G GG+E+  + 
Sbjct: 87  NSENDTETLEALFND--ASKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R  
Sbjct: 145 SILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTS 204

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRITH
Sbjct: 205 PFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
            PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +   K +IG G    +IR
Sbjct: 265 FPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWG---HQIR 321

Query: 308 TYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y  F   ++ D+R      +++ +L G I  +I  +L A +A+
Sbjct: 322 SYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKAE 365


>gi|302759765|ref|XP_002963305.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
 gi|300168573|gb|EFJ35176.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
          Length = 927

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 154/336 (45%), Positives = 222/336 (66%), Gaps = 10/336 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           ++ +  K++  +++R A +   + E     D  IK+ +E   +   +  I     K++E 
Sbjct: 16  ILRILEKRMISIEDRHACLSKALLEPGIASDELIKMNKELRKLDYSVDMIKALRAKEKEV 75

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  ++ +   D E+R LA  E+    +E+R+ ++++   L+PKD  D +        G
Sbjct: 76  IGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEADSR--------G 127

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG EA++F  DLF+MYE+Y A   W+ EVLS +  D  GYKE  A ISG GV+  +KFE
Sbjct: 128 AGGDEASIFASDLFKMYEKYTANNSWRFEVLSITTTDTRGYKEASAVISGDGVYGALKFE 187

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE +GR+HTS A+VA+LPEA E+DV+I  ++I+IDT RA G+GGQHVNT
Sbjct: 188 SGVHRVQRVPVTEKAGRIHTSTASVAILPEANEVDVEIRNDEIKIDTYRAGGAGGQHVNT 247

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH PTGI+V    E+SQH+N+ +A+ +L ARLY++ER R A  RS  R+ QIG
Sbjct: 248 TCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSRAAASRSELRQDQIG 307

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           S DRSERIRTYNF QGR+TDH++ +T + +E +++G
Sbjct: 308 SSDRSERIRTYNFPQGRVTDHQVGVTQHAIEQIMEG 343


>gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift [Anaplasma
           phagocytophilum HZ]
 gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ]
          Length = 376

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 176/343 (51%), Gaps = 17/343 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L++    ++L  S     D   K   L  E + +S +++   + +++ ++  +L  +I D
Sbjct: 30  LESTLESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISD 89

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            +            + A  + ++   ++     +     D  SC L IR+G GG+E++ +
Sbjct: 90  SDD-----RDFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDW 144

Query: 129 VGDLFRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           V  L RMY ++A    ++ VE + S D ++ G K +   I G G +   + ESG+HR+ R
Sbjct: 145 VCMLLRMYTKWAESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVR 204

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIP-LEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   + + + HTS A+V V P            +D+RIDT RASG+GGQHVN T+SAVRI
Sbjct: 205 ISPFDHAAKRHTSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVRI 264

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           THIP+G++V   + +SQHQNR  A  +L++RLY++E +      + +   K +IG G   
Sbjct: 265 THIPSGMVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDHQNKCEIGWG--- 321

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y     R + D R       ++ V+ G +D  I   L 
Sbjct: 322 HQIRSYVMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 364


>gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT
           5716]
          Length = 332

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/334 (31%), Positives = 172/334 (51%), Gaps = 10/334 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     D   +  E+ AA++ +  +   +   + + ++L        ++ +     + E
Sbjct: 1   MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPE--LKAE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +      ++E         L     D    ILEI  G GG+EA  +   L RMY R+A  
Sbjct: 59  LDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             + VE  +    ++ G K +   I G   +  +  E GVHR+ R+   +++ R HTS A
Sbjct: 119 HGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+P     I+V+I   D+R+DT RASG+GGQH+N T+SAVRITH+PTGI+  + +E+
Sbjct: 179 SVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ QNR+ AM +L+++LY++E ++ A ER+     Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWG---SQIRSYVFHPYTLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           D R     + +  V+ G +D  IN  L  + A+ 
Sbjct: 296 DARTGYETHDVIGVMDGDLDPFINAYLQWNLAQK 329


>gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8]
 gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8]
          Length = 378

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 164/343 (47%), Gaps = 5/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I +   +  E+  + +E    D   K          +  K+  Y++      D+  +I 
Sbjct: 28  DIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAADDIEVMIE 87

Query: 68  DH-NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D + +     E+ A   +++   +  +   L     D  + IL   AG GG+EA 
Sbjct: 88  MAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHAGAGGTEAQ 147

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY ++A    +  +++   +  D G K     I G   +  +K ESG+HR+ 
Sbjct: 148 DWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGIKSCSMFIEGENAYGYLKSESGIHRLV 207

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   ++SG  HTS + V V+PE    I+V+I  EDI ++  RASG+GGQH+N T SAVR
Sbjct: 208 RISPFDSSGSRHTSFSAVEVMPELDDNIEVEIRPEDIEMEVYRASGAGGQHINKTSSAVR 267

Query: 246 ITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + H PTGI+    +++SQ QNR  AMK+L+A+L +++ +    +    + +Q        
Sbjct: 268 LIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ-KEIAWGS 326

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y F     + D R       ++ V+ G +D  IN  L A
Sbjct: 327 QIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAYLKA 369


>gi|289551384|ref|YP_003472288.1| peptide chain release factor 2 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180915|gb|ADC88160.1| peptide chain release factor 2 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 334

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 170/338 (50%), Gaps = 17/338 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I       D + ++      ++ +   +    +L
Sbjct: 1   MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
               +   +K  +         LL     D  + ILE+  G GG+E+  +   L RMY+R
Sbjct: 61  EMDVLAFNDKLDQ-----FELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y     +KVE +     D+ G K +   + G   +  +K E GVHR+ R+   +ASGR H
Sbjct: 116 YCEQNGFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRH 175

Query: 199 TSAATVAVLPEA--AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+    EI+++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V 
Sbjct: 176 TSFASCDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              + DHR N    K++ V+ G I   I   L     +
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIGPFIEAYLRQQMDQ 330


>gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
           43160]
 gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
           43160]
          Length = 370

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 156/346 (45%), Gaps = 8/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   AE+E + S     +         + +S +   +   ++ +    D+  +  
Sbjct: 24  DVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEELRSRLDDVGLLHE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +S+    A+ E           E       L     D +  ++ IR+  GG +AA 
Sbjct: 84  MAVEESDEATAAEAERELASLRQAIDEL--EVRTLLSGEYDSREALVTIRSEAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A   ++ VE+   S  ++ G K     +     +  +  E G HR+ R
Sbjct: 142 FAEMLMRMYLRWAERHRYPVELYDVSYAEEAGIKSATFAVKQPYAYGTLSVEQGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       VDIP  +IRID  R+SG GGQ VNTTDSAVRI
Sbjct: 202 ISPFDNQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRIDVFRSSGPGGQSVNTTDSAVRI 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +EKSQ QNR  AM+VL+ARL    ++    E  A R      G+   +
Sbjct: 262 THLPTGIVVSCQNEKSQIQNRAAAMRVLQARLLARRQEEQRAEMDALRGEGSSWGN---Q 318

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R          VL G ID  I   +   + +
Sbjct: 319 MRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGIRWRRQQ 364


>gi|307155327|ref|YP_003890711.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
 gi|306985555|gb|ADN17436.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
          Length = 370

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 94/345 (27%), Positives = 168/345 (48%), Gaps = 11/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  +  ++E   ++    D+          ++ + S + +Y Q + + +D   ++ 
Sbjct: 25  DLPTLGAKIKDLEQVAAQPEFWDSPDMAQTTLQELNELKSALELYQQWQTQLEDAKAIVE 84

Query: 68  --DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +   D+ + + AQ  +  +  E+   E +           D K  +L I AG GG++A
Sbjct: 85  LLELEEDTSLLEEAQTNLEQLNHELERWELQQL----LSGLYDAKGAVLTINAGAGGTDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+   + +KV +   S+ D+ G K     I GR  +  +K E G HR+
Sbjct: 141 QDWAEMLLRMYTRWGEKQGYKVHLAEISEGDEAGLKSATLEIEGRYAYGYLKGEKGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
            R+    A+G+  TS A V V+P      ++V+IP +D+ I T R+ G GGQ+VN  ++A
Sbjct: 201 VRISPFNANGKRQTSFAGVEVMPNLGVEAVNVEIPEKDLEITTSRSGGKGGQNVNKVETA 260

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ HIPTG+ V  + E+SQ QN+ +A+ +L+A+L  +  ++ A E +  R   +     
Sbjct: 261 VRVVHIPTGLAVRCTQERSQLQNKEKALALLKAKLLVILTEQRAKEIAQIRGDMVE-AAW 319

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR Y F   + + D R N+    +  V+ G ++  I   L  
Sbjct: 320 GNQIRNYVFHPYQMVKDLRTNVETSDVGAVMDGDLNGFIEAYLRQ 364


>gi|15605186|ref|NP_219972.1| peptide chain release factor 2 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789195|ref|YP_328281.1| peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13]
 gi|7388051|sp|O84465|RF2_CHLTR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|123606855|sp|Q3KLN9|RF2_CHLTA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3328893|gb|AAC68059.1| Peptide Chain Release Factor 2 [Chlamydia trachomatis D/UW-3/CX]
 gi|76167725|gb|AAX50733.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           A/HAR-13]
          Length = 369

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 178/344 (51%), Gaps = 11/344 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              +N   E+E +  +    D  ++  +    I+ +  ++S +++ K +   +   + D 
Sbjct: 27  EGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDE 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S  ++    ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V
Sbjct: 87  ESSKDLEMQKELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWV 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A+   W++EV+   D +  G K I   + G   +   K ESGVHR+ R+ 
Sbjct: 145 EMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRIS 204

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ + HTS A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH
Sbjct: 205 PFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSER 305
            PTGI+V   +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +
Sbjct: 265 FPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQ 321

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           IR Y F     + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 322 IRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 365


>gi|254437327|ref|ZP_05050821.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
 gi|198252773|gb|EDY77087.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
          Length = 375

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 113/335 (33%), Positives = 165/335 (49%), Gaps = 5/335 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  I+ Y+  KQE  D   +I     + +
Sbjct: 31  RLEEFNARVEDPTLWDDPEAAQKLMRDRQSLVDAIASYEVIKQELSDHIELIEMGEMEDD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
                  E     K +     +     L     D     LEI +G GG+EA  +   L R
Sbjct: 91  --SDIVTEAEEALKVLAAKAAKKELEALLNGEADANDTFLEINSGAGGTEACDWAAMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KV++ S S  ++ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYIRWAERKGYKVDLQSESAGEEVGIKSASYKISGHNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHAPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  + +   +   +   G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHENA-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + + D R        + VL G +D  +   L   
Sbjct: 328 YQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362


>gi|171910508|ref|ZP_02925978.1| peptide chain release factor 2 [Verrucomicrobium spinosum DSM 4136]
          Length = 359

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 91/347 (26%), Positives = 170/347 (48%), Gaps = 16/347 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD---LHTVIG 67
            LK+    +E  ++     D   +  +    ++ + ++I   ++ ++  +D   L  +  
Sbjct: 12  KLKSDLETLEDELARPEFWDNQERARKTIDTVNNLKNRILPLEELERRLEDFFVLGEIAQ 71

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             N  +   ++ +         + +  ++    +L     D K   + I  G GG+E+  
Sbjct: 72  HENDLASWTEVEKEYH-----AMEKALSDFELAMLLTGELDKKGAFVTIHCGAGGTESCD 126

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY+R+     +K E++  +  ++ G +  V  ++G   F ++  E GVHR+ R
Sbjct: 127 WADMLLRMYQRWCERSGYKTEMVDFAPGEEVGVRSAVFRVTGDYAFGKLNCERGVHRLVR 186

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ R HTS A+V V PE   +I +++   DI+ +T R+ G GGQ+VN  ++AVR+
Sbjct: 187 ISPFDSAKRRHTSFASVDVTPEVDEDIGIELNEADIKFETYRSGGKGGQNVNKVETAVRL 246

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDRS 303
            H PTGI+V    ++SQ +NR  AM +L+A+LY +E+  K+   ER    K  +  G   
Sbjct: 247 IHEPTGIIVNCQVQRSQGKNREMAMNMLKAKLYQLEQDKKKTEMERQYGEKGDVAWG--- 303

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +IR+Y F   + + DHR       +  V+ G +D  I   L   +A
Sbjct: 304 SQIRSYVFQPYQMVKDHRTGEKTGNVGNVMDGDLDAFIEAKLRGRKA 350


>gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 368

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 173/346 (50%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I  +K +  ++  +  E    D      K  +E+   +  I  +     +    +DL  
Sbjct: 27  DIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFNHYNRKIENLKSLTDEISSLKDLLE 86

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++      S  +D           ++ +   +     L  D  DD   IL+I AG GG+E
Sbjct: 87  IMEMEGDYSSYKDFK-----DDLIKLEKHAEDFKIATLLNDKYDDNDVILQIHAGAGGTE 141

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY RY   + +  E+L     D+ G K     I G   +  +K E GVHR
Sbjct: 142 AQDWASMLLRMYTRYCEQKGFSAEILDLQKEDEAGIKSATLLIKGDSCYGYLKGEKGVHR 201

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS ++V V PE     DVDI  ED++IDT R+SG+GGQHVNTTDSA
Sbjct: 202 LVRISPFDSNKRRHTSFSSVDVYPELEDVEDVDIKPEDLKIDTYRSSGAGGQHVNTTDSA 261

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARL--YDVERKRMANERSANRKLQIGSG 300
           VRITHIPTG++V   +E+SQ QNR  AMK+L+A+L     E ++ A E  +    QI  G
Sbjct: 262 VRITHIPTGVVVQCQNERSQIQNRETAMKLLKAKLISLAQEEQKEAIEDLSGNYSQIAWG 321

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y F     + DHR N  +  +E V+ G +D  IN  L 
Sbjct: 322 ---SQIRSYVFQPYTMVKDHRTNEEIGDVESVMDGNLDPFINAYLQ 364


>gi|172039100|ref|YP_001805601.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
 gi|171700554|gb|ACB53535.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
          Length = 358

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/344 (28%), Positives = 163/344 (47%), Gaps = 7/344 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK     +E   ++    D           ++ + S++  Y +   + +D   +  
Sbjct: 13  DLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQLEQYQRWCHQLEDTKAIAE 72

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +     + E      ++    +      L     D K  IL I AG GG++A  
Sbjct: 73  LLELEDDT--TLRQEAQENITQLNHNLDRWELQQLLSGIYDTKGAILTINAGAGGTDAQD 130

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + +KV++   S+ D+ G K     I GR  F  +K E G HR+ R
Sbjct: 131 WAQMLLRMYTRWGEQQGYKVDLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVR 190

Query: 188 VPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +    A+G+  TS A V V+P  E  ++ V+IP +D+ I T R+ G GGQ+VN  ++AVR
Sbjct: 191 ISPFNANGKRQTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVETAVR 250

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + HIPTGI V  + E+SQ QN+ +A+ +L+A+L  + +++ A E +  R   +       
Sbjct: 251 VVHIPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMV-DAAWGN 309

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR Y F   + + D R N+    +  V+ GY+D  I   L   
Sbjct: 310 QIRNYVFHPYQMVKDLRTNIETTDITGVMDGYLDPFIEAYLRYD 353


>gi|85374178|ref|YP_458240.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
 gi|84787261|gb|ABC63443.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
          Length = 375

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 162/342 (47%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    +       ++ E   +   +  +     +  +  +   +     
Sbjct: 30  RRLDELNARVQDPDLWNDPKEAQAISREQKTLETAVKTVREIGSEMADAIEFVELGEAEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  +++         ++             L     D     +EI AG GG+E+  +  
Sbjct: 90  DEDVVKEGLASLQKLADRADA-----DKVQALLSGEADGNDTYIEIHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R +KVE +     D  G K     + G   +   K ESGVHR+ R+  
Sbjct: 145 MLLRMYARWAERRGFKVETVEYQAGDQAGIKSATLLVKGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V P     I+++I   D++IDT RASG+GGQHVNTTDSAVRITH 
Sbjct: 205 YDSSARRHTSFSSVWVYPVIDDNIEIEINDSDLKIDTYRASGAGGQHVNTTDSAVRITHQ 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTGI+V + +++SQH+NR  AM +L+ARL++ E        S     K +IG G    +I
Sbjct: 265 PTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQEKTEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R  +T    + VL G +D  I+  L   
Sbjct: 322 RSYVLQPYQMVKDLRTGVTSSSPDDVLDGALDPYISAALAQR 363


>gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
 gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
          Length = 370

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 186/347 (53%), Gaps = 14/347 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +L+ + +EIE + ++    +       L +E   I+ ++           +  +L  + 
Sbjct: 27  DELRVKLSEIETQENDPNFWNNAKNAAILGKEKTKITNLLKAYENAFNALNDANELFDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              + D  ++      +     ++ +    +   +L    +D+K+ I+ I  G GG+E+ 
Sbjct: 87  NSESDDETLKA-----LFEDAPKLEDSITSLEISMLLSGENDNKNAIVSIHPGAGGTESN 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+     +KVE L   + D+ G K++   + G   +  +K E+G+HR+ 
Sbjct: 142 DWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLKAENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++GR HTS ++V V PE   +I+++I  +D+RID  RASG+GGQHVN T+SAVR
Sbjct: 202 RTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPT I+V   +++SQH+N+  A K+LR+RLY++E  +     ++  K ++G G    
Sbjct: 262 ITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAAANSGEKSEMGWG---H 318

Query: 305 RIRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +IR+Y  F   ++ D R N      E +L G I  +I  +L A +A+
Sbjct: 319 QIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMKAQ 365


>gi|260944632|ref|XP_002616614.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720]
 gi|238850263|gb|EEQ39727.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720]
          Length = 406

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 130/362 (35%), Positives = 206/362 (56%), Gaps = 14/362 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L   ++  +   F+ +E +MS +        + + +++IS ++ K   Y Q  +    L 
Sbjct: 43  LLQTRVETMTKEFSVLEKQMSSNEF--DQDTVVK-FSSISSVLDKYHTYQQDMENLSSLL 99

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I + + D+E+ + A  E+  +   + +  + +   LLP     +K  ILE+R G GGS
Sbjct: 100 EIINE-DLDAELVEEANEELKEVVPRVVKASSSLKKRLLPPIVHSNKPAILELRPGVGGS 158

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF  DL  MY  +A    W  ++LS S + +G   E + +I   G ++ ++ ESGVH
Sbjct: 159 EAALFTQDLLNMYINFANYMSWPYKILSESHSSNGFLNEAIISIDAPGAYNVLRHESGVH 218

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQ 235
           RVQR+PATE+ GR+HTS A V VLP+          E +      +IRIDTMR+ G GGQ
Sbjct: 219 RVQRIPATESKGRIHTSTAAVVVLPKMSDGTEQSLKEDERSFAPGEIRIDTMRSGGKGGQ 278

Query: 236 HVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTTDSAVRI HIPTG ++V   E+SQ +N+ +A  +LR+RL  +ER++   E+   R 
Sbjct: 279 HVNTTDSAVRIVHIPTGIMVVQQDERSQPKNKAKAFSILRSRLAQMEREKEIAEQKKLRS 338

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIG 353
            Q+ + DRS++IRTYN+ Q R+TDHR N +++ L   + G  ++++I  +      + + 
Sbjct: 339 DQVTTTDRSDKIRTYNYPQNRVTDHRCNYSVHDLPGFMAGPKLEEMIEKMDEHEFEERLQ 398

Query: 354 SA 355
             
Sbjct: 399 ML 400


>gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii]
          Length = 371

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 173/341 (50%), Gaps = 6/341 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++       E +M+E    D   K  +  +  + +  K   +   K++  D  T +   
Sbjct: 27  DNISESIEINEAKMAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELL 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             +++       E    + +     ++    LL     DD + ++EI  G GG+EA  + 
Sbjct: 87  RLEADADLQKDTEDQLAKLQEEF--HQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWG 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY+RY   R  K EV +    D+ G K +   ISG+  +  +K E GVHR+ R+ 
Sbjct: 145 NMLLRMYQRYCDSRGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRIS 204

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS A+V V+PE    I++DI  +D+RID  R+SG+GGQH+N T SAVRITH
Sbjct: 205 PFDSAKRRHTSFASVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITH 264

Query: 249 IPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+  + +++SQ QNR  AM  +RA+L+ +E ++   E++A +  Q+       +IR
Sbjct: 265 IPTGIVTTSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQL-DIAWGSQIR 323

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y F     + DHR       +  V+ G +D  I   L   
Sbjct: 324 SYVFHPYSMVKDHRTGYETADVGGVMDGKLDPFIYAYLQWR 364


>gi|302383300|ref|YP_003819123.1| hypothetical protein Bresu_2190 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193928|gb|ADL01500.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 373

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 169/342 (49%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +  E+  R+ +    +       ++ E + +   I  +   +   +E   L  +  +  
Sbjct: 30  RKLDELNARVEDPTLWNDPDAAQAVSRERSRLKTQIDTVLEMESGLEEGVMLADMADEEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            ++ + +         ++  R          L     D     LE+ +G GG+E+  + G
Sbjct: 90  DEATLEEARAALKAIKDRASR-----AELEALLSGEADGNDAYLEVNSGAGGTESCDWAG 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A    ++V++ +S D D  G K     ++G   +  +K ESGVHR+ R+  
Sbjct: 145 MLLRMYSRWAKAHGYEVQIEASEDGDQAGIKSATILVTGPNAYGWLKSESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +A+ + HTS A+V V P     I++DI   D+R DT RASGSGGQH+N TDSAVR+THI
Sbjct: 205 YDAAAKRHTSFASVGVSPVVDDTIEIDINPADVRTDTYRASGSGGQHINKTDSAVRLTHI 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA--NERSANRKLQIGSGDRSERI 306
           PT  +V   + +SQHQNR +A K+LR RLY++E ++     +  A+ K  IG G    +I
Sbjct: 265 PTNTVVACQAGRSQHQNREQAWKMLRGRLYELELQKREAAAQALADAKTDIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R  +     + VL G +D  +   L A 
Sbjct: 322 RSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAAR 363


>gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
 gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 369

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 104/354 (29%), Positives = 176/354 (49%), Gaps = 10/354 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   I  L     E+E  M ES   D   +     A    I  +I +Y+  +   +D+
Sbjct: 21  MGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDI 80

Query: 63  HTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
             +I      +DS +      E+  +   +  L       L+     D  + I+ + +G 
Sbjct: 81  KVLIEMAIEENDSSLVTEVYNEISTLSDSVENL----RLELMLSGEYDTNNAIVTLHSGV 136

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG++A  +   L RMY R+   + + VE L     D+ G K     ++G   +  +K E 
Sbjct: 137 GGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEK 196

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           G+HR+ R+    A+G+  TS A++ V PE   + +V+I   D+++DT RASG+GGQHVN 
Sbjct: 197 GIHRLVRISPFNANGKRQTSFASLEVTPELRQDQNVEINPSDLKVDTYRASGAGGQHVNK 256

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA+RITHIPTGI+V   +E+SQ QNR  A+ +L+++L +++ +R   E+  +    + 
Sbjct: 257 TESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELK-ERAHKEKIEDLTGDLK 315

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
                 +IR+Y F     + DHR N+ +  +  V+ G +D  I   L + + K 
Sbjct: 316 DMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYLHSDENKR 369


>gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
 gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
          Length = 325

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 103/331 (31%), Positives = 168/331 (50%), Gaps = 15/331 (4%)

Query: 23  MSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    +      +L  E   +  ++S +    +   +  +L  +    N ++ + +L 
Sbjct: 1   MEQPDVWNDPERAHELNRERVRLQTLVSSLERLTRGLADTAELLELARTENDEATLAELD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                   +        + +  +     D+++  L+I+AG+GG+EA  +   L RMY R+
Sbjct: 61  ADVTGYQSEIEA-----LEFRRMFSGEMDERNAFLDIQAGSGGTEAQDWANMLLRMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              +++  E++  S+ +  G K     I G   F  ++ E+GVHR+ R    ++  R HT
Sbjct: 116 VEQKRFTAEIIEFSEGEVAGIKSATLRIEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A V V PE    ++V+I   D+RID  RASG+GGQHVN T+SAVRITH+PTGI+    
Sbjct: 176 SFAAVFVSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +++SQH+N+  AMK LRA+LY++E  +   +       K  IG G    +IR+Y   Q R
Sbjct: 236 NDRSQHKNKATAMKQLRAKLYELEMHKRREQADQVEESKADIGWG---SQIRSYVLDQSR 292

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           I D R  + +   + VL G +D  I   L A
Sbjct: 293 IKDLRTGVEIGHTQAVLNGALDPFIEASLKA 323


>gi|297183299|gb|ADI19436.1| protein chain release factor b [uncultured bacterium HF0500_16O16]
          Length = 361

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 110/352 (31%), Positives = 174/352 (49%), Gaps = 19/352 (5%)

Query: 9   ICDLKNR---FAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDL 62
           I D++ R    A ++  M+ +   +   +    T+E   +  +         +  +  +L
Sbjct: 17  IFDIETRQKTLASLDEEMASNEFWNDRQRAEQVTKEARTLRDLTQPWQELKGRLDDLAEL 76

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +  D +    ++DL        E         + +  +  D DD K  +L I +G GG
Sbjct: 77  LELSADEDDADTLKDLQIELSDVDETLGE-----LEFFSMLSDEDDPKDALLVIHSGAGG 131

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EAA +   L RMY R+   R +  E++     D+ G K     + G   +  +K E+GV
Sbjct: 132 TEAADWAEMLMRMYGRWIERRGFTSEIMDLQPGDEAGIKGATIEVKGSYAYGYLKAEAGV 191

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+ R HTS A+V V P+   I   ++  ED++IDT +A G+GGQHVN T 
Sbjct: 192 HRLVRISPFDANKRRHTSFASVFVYPDVDSIPDVELRDEDLQIDTYKAGGAGGQHVNKTS 251

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIG 298
           SAVRITH+PTGI+V   +E+SQ +N+  AMKVL ARLYD  ++    +  A    K  I 
Sbjct: 252 SAVRITHLPTGIVVNCQNERSQLKNKGTAMKVLTARLYDHYKQEEMKKMEAVESTKKAI- 310

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
             D   +IR+Y F     + DHR       ++ ++ G +D  IN  L+A Q 
Sbjct: 311 --DFGSQIRSYVFQPYTLVKDHRTGHESGNVQAIMDGDLDGFINAFLSAAQT 360


>gi|116671212|ref|YP_832145.1| peptide chain release factor 2 [Arthrobacter sp. FB24]
 gi|229576665|sp|A0JYC5|RF2_ARTS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116611321|gb|ABK04045.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter sp.
           FB24]
          Length = 371

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 172/351 (49%), Gaps = 11/351 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--I 66
           + +LK   AE+  R  E    D      +  + +S   S++   +       DL  +  +
Sbjct: 26  VEELKEDIAELSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTLVSRIDDLEVLVEL 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
           G    D++    A  E+ +I K +++LE             D++  ++ IRAG GG +AA
Sbjct: 86  GQDEDDADSMGEAAAELESIRKSLKDLEVVTL----LSGEFDEREAVVTIRAGAGGVDAA 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            F   L RMY R+A    +   ++ +S  ++ G K     ++    +  +  E+G HR+ 
Sbjct: 142 DFAEMLLRMYLRWAERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLSVEAGTHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V V+P       +DIP  +IR+D  R+SG GGQ VNTTDSAVR
Sbjct: 202 RISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQSVNTTDSAVR 261

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTG +V+  +EKSQ QNR  A++VL++RL  +++++   E+ A       S    +
Sbjct: 262 LTHIPTGTVVSMQNEKSQLQNRAAALRVLQSRLLLLKKEQEDAEKKAFAGDVKAS--WGD 319

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ++R+Y  +  + + D R    +     V  G IDD I+  +         +
Sbjct: 320 QMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWRTDNRNAA 370


>gi|262280476|ref|ZP_06058260.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258254|gb|EEY76988.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 310

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 162/316 (51%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ + +  +  + + +S + D+      +      +  
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQ-----SELGAAEDEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI++G+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V + PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+TH PTGI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E ++         + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRAKLYELEMQKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDRFIEASLKQ 308


>gi|199597236|ref|ZP_03210667.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
 gi|229551742|ref|ZP_04440467.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
 gi|258539140|ref|YP_003173639.1| peptide chain release factor B-like protein [Lactobacillus
           rhamnosus Lc 705]
 gi|199591752|gb|EDY99827.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
 gi|229314873|gb|EEN80846.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
 gi|257150816|emb|CAR89788.1| Peptide chain release factor 2 [Lactobacillus rhamnosus Lc 705]
          Length = 332

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 170/332 (51%), Gaps = 6/332 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D      +   A + +  K   +   + E +DL   +     + +     Q E
Sbjct: 1   MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDP--DLQHE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                K+++E  ++    LL     D  + ILEI  G GG+E+  +   L RMY+R+A  
Sbjct: 59  EETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEV      D+ G K +   I+G   +  +K E GVHR+ R+   +++GR HTS A
Sbjct: 119 NGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    I+VDI  EDI+++  R+SG+GGQH+N T SAVR+ H+PTGI+  + +++
Sbjct: 179 SVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QN+  AM +L+A+LY  E +    +  A +  Q        +IR+Y F     + DH
Sbjct: 239 SQFQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQ-KDVAFGSQIRSYVFHPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R N      + V+ G ++  IN  L    A+ 
Sbjct: 298 RTNYETGNGQAVMDGDLNPFINAYLQWELAQK 329


>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
 gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
          Length = 330

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 105/332 (31%), Positives = 174/332 (52%), Gaps = 14/332 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MS+    D   K  E     + + + +  Y Q   + +D + ++ +   D +   +    
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMML-EMAIDEDDLSMESEI 59

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              +++    LE     LLL     D  + IL   AG GG+EA  +   L RMY R+A  
Sbjct: 60  KEYVKQIEETLEK-QEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             + +E++     D+ G K     + G   F  +K E GVHR+ R+   +A+ R HTS A
Sbjct: 119 SGFSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
            V V+PE  +  +++I ++D+++DT RASG+GGQH+N TDSAVR+TH PTGI+V   +++
Sbjct: 179 AVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS----GDRSERIRTYNFSQG-R 315
           SQ QNR +A+++LRA+L+++E ++ A       K QIG      +   +IR+Y F     
Sbjct: 239 SQMQNREQALRLLRAKLFELELEKQAEL-----KEQIGGTYQAIEWGSQIRSYVFHPYNL 293

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + DHR ++    ++ V+ G +D  +   L   
Sbjct: 294 VKDHRTSVETGNVQAVMDGNLDPFVEGFLKKE 325


>gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
 gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
           hominis C80]
 gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
 gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
           hominis C80]
          Length = 332

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 172/338 (50%), Gaps = 17/338 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   K  +      A+  I++     + K ++      ++ +   D    DL
Sbjct: 1   MMTEPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q  V   E+  +         LL     D  + ILE+  G GG+E+  +   L RMY+R
Sbjct: 61  EQDIVSFREQIDQ-----FELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + +K+E +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YGEQQGFKIETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+PE      +++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V 
Sbjct: 176 TSFASCDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              + DHR N    K++ V+ G I   I   L    ++
Sbjct: 293 YSMVKDHRTNEETAKVDAVMDGDIAPFIEAYLRQTMSQ 330


>gi|14195074|sp|P58105|RF2_CHLMU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 173/344 (50%), Gaps = 11/344 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            + +     +E    +    D   +       I+ +  ++  Y++ K +   +   + D 
Sbjct: 27  EEKETELKNLEQLSIQDSFWDDVSRAGRISEKIARLKQQLLEYNELKNKINSIKFFLEDE 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S  ++    ++E   I  E +  E     L L     D  SC L I AG GG+E+  +V
Sbjct: 87  ESSKDLEIQKELEKEFIFCEKKIAE--WETLRLLAGELDRNSCFLSINAGAGGTESCDWV 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             LFRMY R+A    WKVEV+   D +  G K I   + G   +   K ESGVHR+ R+ 
Sbjct: 145 EMLFRMYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRIS 204

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ + HTS A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH
Sbjct: 205 PFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
            PTGI+V   SE+SQ QNR   M +LRAR+Y    +    +++ NR  K +I  G    +
Sbjct: 265 FPTGIVVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWG---SQ 321

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           IR Y F     + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 322 IRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLADY 365


>gi|262380518|ref|ZP_06073672.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
 gi|262297964|gb|EEY85879.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
          Length = 310

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 162/316 (51%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ Q +  +  + + +S + D+      A      E  
Sbjct: 1   MAKEKGELENVINVLEGLSTQLEDAQAMLDLAVEADDESLLADVQ-----AELSSAEEAL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI+AG+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V V PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+TH+PTGI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E  +         + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRAKLYELEMSKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDKFIEASLKQ 308


>gi|257069075|ref|YP_003155330.1| peptide chain release factor 1 [Brachybacterium faecium DSM 4810]
 gi|256559893|gb|ACU85740.1| bacterial peptide chain release factor 1 (bRF-1) [Brachybacterium
           faecium DSM 4810]
          Length = 378

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 140/366 (38%), Positives = 208/366 (56%), Gaps = 21/366 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYA---AISPIISKISIYDQKKQEEQDLH 63
            ++  L+   A ++  M++    +   +          +  ++   +  +    + + +H
Sbjct: 8   DRLAPLRREHAALQEAMADPALHEDAARARRVGRRYAELEGVLDAAARLEATAADLETVH 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +      D E+   A      +E+E   LE+    LL P+D DD +  ILEI+AG GG 
Sbjct: 68  ELEALGEGDEELAREAAQLRERLEQEREHLED----LLAPRDPDDARDVILEIKAGAGGE 123

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-------VFSRM 176
           E+ALF  ++ RMY  YA  + W+VEVL+S++++ GG+K++   I+ RG       V++ +
Sbjct: 124 ESALFAAEMLRMYRAYAESQGWRVEVLTSAESELGGFKDVTVAIAARGAGGSGSGVYAHL 183

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD------IPLEDIRIDTMRAS 230
           K E+GVHRVQRVP TE+ GR+HTSA  V VLPEA E D        +   ++RID  R+S
Sbjct: 184 KHEAGVHRVQRVPVTESQGRIHTSAVGVLVLPEADEADESELLAEAMAPANLRIDVFRSS 243

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQ VNTTDSAVRITH+PTG++V    +KSQ QNR +A+++LR RL D  R     + 
Sbjct: 244 GPGGQSVNTTDSAVRITHLPTGVVVSCQDQKSQLQNREQALRILRTRLLDARRAEQEAQS 303

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           SA R+ Q+ + DRSERIRTYNF + R+ DHR       L  VL G ++D+I     A +A
Sbjct: 304 SAARRSQVRTVDRSERIRTYNFPESRVADHRTGYKAGNLAQVLSGDLEDLIASSREAERA 363

Query: 350 KMIGSA 355
             +  A
Sbjct: 364 ARLADA 369


>gi|317124427|ref|YP_004098539.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
           calvum DSM 43043]
 gi|315588515|gb|ADU47812.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
           calvum DSM 43043]
          Length = 370

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 170/352 (48%), Gaps = 11/352 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  +  E+E + SE    D   K  +  +A+S   ++            DL T++ 
Sbjct: 24  DLDVLAKQIVELERQASEPNLWDDQDKAQQVTSALSRANAERDRVLSMDSRINDLETLVE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +S+   + +      + +    E E+  LL  +  +     ++ IRAG GG +AA 
Sbjct: 84  MATEESDQDTMDEALRDLAKIKKDLGELEVRTLLSGEYDER--EAVVTIRAGAGGVDAAD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +  +V+ +S  ++ G K     ++    F  +  E G HR+ R
Sbjct: 142 FAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVNVPYAFGHLNVEGGTHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P   ++  ++IP  +++ID  R+SG GGQ VNTTDSAVR+
Sbjct: 202 ISPFDNQGRRQTSFAAVEVIPLIESDDSIEIPENELKIDVFRSSGPGGQSVNTTDSAVRM 261

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRS 303
           TH+PTGI+V+  +EKSQ QNR  A++VL++RL      +   E +A +K   G       
Sbjct: 262 THLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLL----QRKAEEAAVKKEMAGDVKASWG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +++R+Y  +  + + D R +        V  G ID  I   +    A+   +
Sbjct: 318 DQMRSYVLNPYQMVKDLRTDFETGNPAAVFDGDIDGFIEAGIRWQIAQKKAA 369


>gi|299768411|ref|YP_003730437.1| peptide chain release factor 2 [Acinetobacter sp. DR1]
 gi|298698499|gb|ADI89064.1| peptide chain release factor 2 [Acinetobacter sp. DR1]
          Length = 310

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ + +  +  + + +S + D+      +      +  
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQ-----SELSAAEDEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI++G+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V + PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+TH PTGI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRARLY++E ++         + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRARLYELEMQKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDRFIEASLKQ 308


>gi|302829783|ref|XP_002946458.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f.
           nagariensis]
 gi|300268204|gb|EFJ52385.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 147/358 (41%), Positives = 212/358 (59%), Gaps = 37/358 (10%)

Query: 33  IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRE 92
             +  EY+ + P+ +      + ++E +DL  ++ D   DS +R +A+ E   ++++   
Sbjct: 26  RDVGREYSLLKPLATAYERLLRVRRELEDLAALLKDP--DSRVRAMAEEEGRELQQQAAG 83

Query: 93  LENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSS 152
           L   +   L+P+D  D ++ +LE+RAG GG EAALF G+L  MY ++A  R W  +V+  
Sbjct: 84  LTRRLLLALVPRDPRDGRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVEL 143

Query: 153 SDNDD-GGYKEIVATISGRG-------------------------------VFSRMKFES 180
           + ++  GG K +VA ++                                  V+  +  ES
Sbjct: 144 TASEVPGGVKHVVAAVADGRGAGRRAGEIGDGGEGYDGGEGNGDQDGDAIGVYGTLLPES 203

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TEA GRVHTS   V VLP+A E+DV +  ED+RI+TMRASG+GGQHVN T
Sbjct: 204 GVHRVQRVPVTEAQGRVHTSTVAVVVLPQADEVDVKLRDEDLRIETMRASGAGGQHVNVT 263

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRITH+PTG++V   +E+SQH NR  A+K+LRARLYD+E ++ A E    R   + S
Sbjct: 264 DSAVRITHVPTGLVVSCQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVAS 323

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSA 355
            DRSERIRTYNF QGR+TDHR +LTL+ L+ VL G   +  ++  L  A + + +   
Sbjct: 324 ADRSERIRTYNFPQGRVTDHRTHLTLHDLDSVLVGGEGLQRLMGVLRAAREEEALRRL 381


>gi|237802887|ref|YP_002888081.1| peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804809|ref|YP_002888963.1| peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273109|emb|CAX10022.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274121|emb|CAX10915.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 368

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 178/344 (51%), Gaps = 11/344 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              +N   E+E +  +    D  ++  +    I+ +  ++S +++ K +   +   + D 
Sbjct: 26  EGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDE 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S  ++    ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V
Sbjct: 86  ESSKDLEMQKELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWV 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A+   W++EV+   D +  G K I   + G   +   K ESGVHR+ R+ 
Sbjct: 144 EMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ + HTS A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH
Sbjct: 204 PFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITH 263

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSER 305
            PTGI+V   +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +
Sbjct: 264 FPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           IR Y F     + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 321 IRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 364


>gi|89100645|ref|ZP_01173503.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
 gi|89084669|gb|EAR63812.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
          Length = 328

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 107/333 (32%), Positives = 172/333 (51%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M      D         +  + +  ++  +    +  ++L     ++ + + +    +LA
Sbjct: 1   MLHPNFWDDQKAAQVVISESNALKDQVHEFHDLYETFENLELTYELVKEESDEDLQNELA 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      ++  +         LL  +  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  EELTELTKRLAQ-----FELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKKGFKVETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  ++DI  ED++IDT RASG+GGQH+NTTDSAVRITH+PT ++V   
Sbjct: 176 SFVSCEVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ +NR RAMK+L+A+LY  + +    E    R  Q  IG G    +IR+Y F    
Sbjct: 236 TERSQIKNRERAMKMLQAKLYQKKIEEQEQELLEIRGEQKEIGWG---SQIRSYVFHPYS 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR +     ++ V+ G +D  IN  L + 
Sbjct: 293 MVKDHRTSTESGNVQGVMDGDLDPFINAYLRSR 325


>gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2]
          Length = 310

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ + +  +  + + +S + D+      +      +  
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQ-----SELGAAEDEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI++G+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V + PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRARLY++E ++         + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRARLYELEMQKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDRFIEASLKQ 308


>gi|283955061|ref|ZP_06372564.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793428|gb|EFC32194.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           414]
          Length = 366

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 185/347 (53%), Gaps = 12/347 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
            +++ R  EIE   +         +        + I + +  Y+       D   +  + 
Sbjct: 27  ENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENAFNALNDASELFDLA 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +  +D+E  +    +V  +E  I  LE  +         +D K+ I+ I  G GG+E+  
Sbjct: 87  NSENDTETLEALFNDVPKLEDTITSLEISML----LSGENDSKNAIVSIHPGAGGTESND 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R
Sbjct: 143 WASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRI
Sbjct: 203 TSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +A  K +IG G    +
Sbjct: 263 THFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELLKQQDNANAGEKSEIGWG---HQ 319

Query: 306 IRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           IR+Y  F   ++ D+R      +++ +L G I  +I  +L A + + 
Sbjct: 320 IRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKVEQ 366


>gi|289525504|emb|CBJ14981.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           Sweden2]
          Length = 368

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 176/344 (51%), Gaps = 11/344 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              +N   E+E +  +    D   +  +    I+ +  ++S +++ K +   +   + D 
Sbjct: 26  EGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDE 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S  ++    ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V
Sbjct: 86  ESSKDLEMQKELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWV 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A+   W++EV+   D +  G K I   + G   +   K ESGVHR+ R+ 
Sbjct: 144 EMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ + HTS  +V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH
Sbjct: 204 PFDSNAKRHTSFVSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITH 263

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSER 305
            PTGI+V   +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +
Sbjct: 264 FPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           IR Y F     + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 321 IRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 364


>gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
 gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
          Length = 372

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 105/342 (30%), Positives = 179/342 (52%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +   +  E+E+ M +    +      ++   +  +    + Y++ ++   D  T + 
Sbjct: 26  DLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDAFTNYNELEKLRDDARTFME 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D E       ++  +  E + L  ++    L  +  D+ + IL++ AG GG+E+  
Sbjct: 86  IA--DEENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYDNCNAILKLNAGAGGTESCD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  + + VE L   D D+ G K +   I+G   +  +K E GVHR+ R
Sbjct: 144 WASMLLRMYTRWAESKGYTVETLDYLDGDEAGVKSVTIQINGENAYGYLKSERGVHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS  +  V+P+  E  DVDI  +D+RIDT R+SG+GGQH+N T SA+RI
Sbjct: 204 ISPFNANGKRQTSFVSCDVMPDIEEDLDVDINEDDLRIDTYRSSGAGGQHINKTSSAIRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +E+SQHQN+ +AM++L+A+LY ++++  A + +  R  ++       +
Sbjct: 264 THIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQENAEKEAGIR-GEVKEIGWGNQ 322

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y       + DHR N      + VL G ID  +   L  
Sbjct: 323 IRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYLKW 364


>gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 340

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 93/335 (27%), Positives = 154/335 (45%), Gaps = 7/335 (2%)

Query: 19  IELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           +E + +     D      +  + +S + +++   +  +    DL  +     ++ +    
Sbjct: 8   LEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRGRIDDLEILFELAEAEDDPDAR 67

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
           A+ E           E  +    L     D++  ++ IRA  GG +AA F   L RMY R
Sbjct: 68  AEAEAELESVRKALDE--MEVRTLLSGEYDEREALVNIRAEAGGVDAADFAEQLQRMYLR 125

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +  EV  +S  ++ G K     +     +  +  E G HR+ R+   +  GR  
Sbjct: 126 WAERHNYGTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVRISPFDNQGRRQ 185

Query: 199 TSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A V VLP       ++I   ++R+D  RASG GGQ VNTTDSAVR+THIPTGI+V  
Sbjct: 186 TSFAGVEVLPVVEKTDHIEIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPTGIVVSC 245

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR- 315
            +E+SQ QN+  AM VL+A+L +  R+       A +    G      ++R+Y     + 
Sbjct: 246 QNERSQIQNKASAMNVLQAKLLERRRQEEQARMDALKGD--GGNSWGNQMRSYVLHPYQM 303

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           + D R +  +   + VL G ID  +   +   + +
Sbjct: 304 VKDLRTDFEVGNPQSVLDGEIDGFLEAGIRWRKQQ 338


>gi|50309221|ref|XP_454617.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1172907|sp|P41767|RF1M_KLULA RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|641909|gb|AAB18362.1| peptide termination factor [Kluyveromyces lactis]
 gi|49643752|emb|CAG99704.1| KLLA0E14807p [Kluyveromyces lactis]
          Length = 396

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 142/351 (40%), Positives = 211/351 (60%), Gaps = 17/351 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
           N   E+E  +S+  S D  ++  + +A +S I+   S Y ++  + ++L  ++     D 
Sbjct: 45  NELRELEDLLSQGGSFD--LEKQKNFAKLSTIVDSYSKYREEVNQYKELQEILEL---DP 99

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            +R+ A+ ++ A+  ++ +  + +   LLP     DK  ILE+R G GGSEA +F  DL 
Sbjct: 100 SLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSILELRPGVGGSEAMIFTQDLL 159

Query: 134 RMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            MY  YA   KWK  ++S ++N  G G  E +  I   G + ++KFE+GVHRVQRVPATE
Sbjct: 160 NMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYDKLKFEAGVHRVQRVPATE 219

Query: 193 ASGRVHTSAATVAVLPEA------AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           + GR HTS A V VLP+          +     ++IRID MRASG GGQHVNTTDSAVR+
Sbjct: 220 SKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDVMRASGKGGQHVNTTDSAVRL 279

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH P+GI+++   E+SQH+N+ +A  +LRARL + ER     +    RK Q+ + DRS++
Sbjct: 280 THYPSGIVISMQEERSQHRNKAKAFAILRARLAEKERLEKEEKERNARKDQVSTTDRSDK 339

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDII---NPLLTAHQAKMI 352
           IRTYN+ Q RITDHR   TLY +E V++G  +DD+I   +   +  +AK +
Sbjct: 340 IRTYNYPQNRITDHRCGFTLYDIEGVMKGERLDDVIDAMDAFSSEQKAKQL 390


>gi|258507895|ref|YP_003170646.1| peptide chain release factor 2 [Lactobacillus rhamnosus GG]
 gi|257147822|emb|CAR86795.1| Peptide chain release factor 2 [Lactobacillus rhamnosus GG]
 gi|259649221|dbj|BAI41383.1| protein chain release factor B [Lactobacillus rhamnosus GG]
          Length = 332

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 170/332 (51%), Gaps = 6/332 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D      +   A + +  K   +   + E +DL   +     + +     Q E
Sbjct: 1   MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDP--DLQRE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                K+++E  ++    LL     D  + ILEI  G GG+E+  +   L RMY+R+A  
Sbjct: 59  EETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KVEV      D+ G K +   I+G   +  +K E GVHR+ R+   +++GR HTS A
Sbjct: 119 NGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    I+VDI  EDI+++  R+SG+GGQH+N T SAVR+ H+PTGI+  + +++
Sbjct: 179 SVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QN+  AM +L+A+LY  E +    +  A +  Q        +IR+Y F     + DH
Sbjct: 239 SQFQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQ-KDVAFGSQIRSYVFHPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R N      + V+ G ++  IN  L    A+ 
Sbjct: 298 RTNYETGNGQAVMDGDLNPFINAYLQWELAQK 329


>gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
 gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
          Length = 357

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 162/345 (46%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+ + A++E + S     D      +  + +S    ++      +Q   DL  +  
Sbjct: 16  DLDALRAQVADLEQQASSPNLWDDPEAAQKVTSQLSHRQGELRRVSDLRQRLDDLGVLYE 75

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   DS     A+ E+  + K I  LE       L     DD++ ++ IR+  GG +A
Sbjct: 76  LAEAEGDSGSMAEAEAELTDLGKAIDGLEV----RTLLSGEYDDRNAVVTIRSEAGGVDA 131

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +  +V   S  ++ G K     +S   V+  +  E G HR+
Sbjct: 132 ADFAEMLLRMYLRWAERHGYPTDVYDISYAEEAGIKSATFKVSAPYVYGTLSVEQGTHRL 191

Query: 186 QRVPATEASGRVHTSAAT-VAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +   R  TS A    +        VD+  +DIR+D  R+SG GGQ VNTTDSAV
Sbjct: 192 VRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDVAEKDIRVDVYRSSGPGGQSVNTTDSAV 251

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V   +EKSQ QN+  AMKVL+ARL   +++    E  A R    G     
Sbjct: 252 RITHLPTGIVVSCQNEKSQLQNKAAAMKVLQARLMLRKKEEERAEMDALRD---GGSSWG 308

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            ++R+Y     + + D R +  +     VL G ID  ++  +   
Sbjct: 309 NQMRSYVLHPYQMVKDLRTDYEVGNPTAVLDGDIDGFLDAGIRWR 353


>gi|326436517|gb|EGD82087.1| peptide chain release factor 2 [Salpingoeca sp. ATCC 50818]
          Length = 449

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 150/360 (41%), Positives = 227/360 (63%), Gaps = 13/360 (3%)

Query: 9   ICDLKNRFAEIEL---RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  +  R  +++    R++E    ++ ++ T+  A    +    S +    +E ++L  +
Sbjct: 81  LDRVLERRRDLQTTIVRLAEEGDSESVVEKTQLLAKTDALAEAASAWFDLSKEMEELEHM 140

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                +D +++ +A  E+  +     E+E  +   ++P D  DD S I+EIRAGTGG+EA
Sbjct: 141 -QRTETDPDLKAMAVSELKEVRARAPEVEQLLLSAMVPHDDADDGSAIVEIRAGTGGTEA 199

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDND----DGGYKEIVATISGRGVFSRMKFESG 181
           A+F  DL+++Y+  A  R W+V+ +++S  +    D G KE+  +++G+  F  +KFESG
Sbjct: 200 AIFAKDLYKLYQHLAVRRGWRVQEMTTSYTEGVGSDDGLKEVTFSVNGQDAFGSLKFESG 259

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TEA+GR+HTS ATVAVLP+A+E+ V I   DI++DT R+ G+GGQHVNTTD
Sbjct: 260 VHRVQRVPITEAAGRIHTSTATVAVLPQASEVTVSIHERDIKMDTYRSGGAGGQHVNTTD 319

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS- 299
           SAVR+THIPTGI+V   SE+SQH+NR  AMK++RAR+Y  ER++   ER+  R+  IG  
Sbjct: 320 SAVRLTHIPTGIVVAVQSERSQHRNRDVAMKMIRARVYQQEREKAQLERAEQRRALIGGT 379

Query: 300 -GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
            G RS+RIRTYNF Q R+TDHR+N+    L  VL+   +D II+ L      + +    E
Sbjct: 380 PGSRSDRIRTYNFPQDRVTDHRVNVRAS-LSSVLEDDGLDGIISSLRQHDNMERLLHVLE 438


>gi|57238478|ref|YP_179609.1| peptide chain release factor 2 [Campylobacter jejuni RM1221]
 gi|73621535|sp|Q5HSX6|RF2_CAMJR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|57167282|gb|AAW36061.1| peptide chain release factor 2 [Campylobacter jejuni RM1221]
 gi|315058910|gb|ADT73239.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 365

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 184/346 (53%), Gaps = 12/346 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
            +++ R  EIE   +         +        + I + +  Y+       D   +  + 
Sbjct: 27  ENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENAFNALNDASELFDLA 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +  +D+E  +    +   +E  I  LE  +         +D K+ I+ I  G GG+E+  
Sbjct: 87  NSENDTETLEALFNDAPKLEDTITSLEISML----LSGENDGKNAIVSIHPGAGGTESND 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R
Sbjct: 143 WASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRI
Sbjct: 203 TSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +   K +IG G    +
Sbjct: 263 THFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWG---HQ 319

Query: 306 IRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y  F   ++ D+R      +++ +L G I  +I  +L + +A+
Sbjct: 320 IRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLISLKAE 365


>gi|291279507|ref|YP_003496342.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
           SSM1]
 gi|290754209|dbj|BAI80586.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
           SSM1]
          Length = 375

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 186/346 (53%), Gaps = 17/346 (4%)

Query: 10  CDLKNRFAEIELR-MSESPSVDA--YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            ++  +   I+   M +    +     +L +E A++   +S+       +++   L  + 
Sbjct: 29  DEINKKIEAIDKMSMEDPDFWNKKESKQLLKEQASLKKFLSEWEELLTIREDIDVLIELF 88

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +       + ++++   E+++  ++    L+     D  + I+ I AG GG+EA 
Sbjct: 89  KEGSEE------VKEDIISNLNELKKRVSDFELKLILNGEHDINNAIVTIHAGAGGTEAC 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +V  LFRMY R+   +K+K E+L     D+ G K I   + G   +  +K ESGVHR+ 
Sbjct: 143 DWVSMLFRMYTRWVERKKYKYEILDMLPGDEAGIKSITFNVIGEYSYGYLKGESGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS A+V VLPE  +       E D++I+T RASG+GGQHVNTTDSAVR
Sbjct: 203 RISPFDSNNRRHTSFASVFVLPEIDDEIDIEINESDLKIETFRASGAGGQHVNTTDSAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PTGI+V   +E+SQH+N+  AMK+L+ARLY+ E ++   E+    + K +IG G+ 
Sbjct: 263 ITHLPTGIVVSCQNERSQHKNKAHAMKILKARLYEYEMEKRNKEKEKLESSKTEIGWGN- 321

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y       + D R       ++ V+ G IDD I   L   
Sbjct: 322 --QIRSYVMHPYKMVKDLRTRYETGNVDAVMDGDIDDFIKTYLLME 365


>gi|168025410|ref|XP_001765227.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683546|gb|EDQ69955.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 406

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 5/347 (1%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L+   I + K R A++EL+ S+    D         + ++ +   + +  Q + + ++  
Sbjct: 50  LASSDIAEKKARLADLELQASQDTLWDDPDAAQRTLSDLAEVKENLDLLQQFENKVEEAQ 109

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I               E   I   +    ++     L     D +   + I AG GG+
Sbjct: 110 LIIELMGEKEGPDGGLVQEASEIVSWLSNALDKFELAKLLSGPYDRRGARVTISAGAGGT 169

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +A  +   L RMY R+A  + + V+V+  S  ++ G K +   + GR  +  +  E G H
Sbjct: 170 DAQDWAEMLLRMYSRWAEKQGYTVKVMEKSPGEEAGIKSVTFEVDGRFAYGYLASEKGTH 229

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTD 241
           R+ R     A G   TS A V V+P   E  +D  IP  ++ + T RA G GGQ+VN  +
Sbjct: 230 RLVRQSPFNAKGLRQTSFAGVEVMPIFEEESLDVEIPETELEVTTTRAGGKGGQNVNKVE 289

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +AVRI HIPTGI V  + E+SQ  N+++ +++L+A+L  +  ++ A++    R   +   
Sbjct: 290 TAVRIVHIPTGIAVRCTEERSQLANKIKGLRLLKAKLLVIALEQKASDLKEIR-GDVVKA 348

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +  ++IR Y F   + + D R       +  V+ G +   I   L  
Sbjct: 349 EWGQQIRNYVFHPYKLVKDVRTATETSDVAGVMDGELGSFITAFLRW 395


>gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 344

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 183/340 (53%), Gaps = 13/340 (3%)

Query: 12  LKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L+ + +E+E +M E    +      ++T+E   I   I ++     K  + + L  ++ D
Sbjct: 9   LEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEMMDD 68

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + +S    +  I+ +  E +   +E      +L     D  + IL +  G GG++A  +
Sbjct: 69  DDEESAYEIINNIKEIEEEIDNYNME------ILLSGEYDKNNAILTLHVGVGGTDANDW 122

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   + +KVEV+   + D+ G K +   + G   +  +K E G+HR+ R+
Sbjct: 123 TEMLLRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRI 182

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS A++ VLPE   E D+DI  EDI++DT RASG+GGQH+N TDSAVRIT
Sbjct: 183 SPFNANGKRQTSFASMEVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRIT 242

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTG++V   +E+SQ  N+  AM +L+A+L +++ +R   E+  +   ++       +I
Sbjct: 243 HIPTGVVVQCQNERSQFSNKDTAMGMLKAKLIELK-ERAHKEKIEDLTGELKDMGWGSQI 301

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y F     + DHR N+ +  +  V+ G +D  IN  L 
Sbjct: 302 RSYVFHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLK 341


>gi|259419215|ref|ZP_05743132.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
 gi|259345437|gb|EEW57291.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
          Length = 374

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 160/339 (47%), Gaps = 6/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  I  Y   +Q+  D   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAIDTYKGIRQDLDDSVELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             D    +     K ++E   +     L     D     LEI+AG GG+EA  +   L R
Sbjct: 91  --DEVVKDAEETLKALKEKAAQKELEALLDGETDPNDAFLEIKAGAGGTEACDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  R + V++       + G K     I G   +  +K ESG HR+ R+      
Sbjct: 149 MYVRWAESRGFSVDLQEEQAGAEAGIKSATYQIKGHNAYGWLKSESGTHRLVRISPFGK- 207

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           G   TS A V   P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 208 GTRETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHEPTGI 267

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R   E +A  + + G      +IR+Y    
Sbjct: 268 VVTSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEAK-GDAGWGNQIRSYVMQP 326

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R N      + VL G +D  +   L    A  
Sbjct: 327 YQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMKVAGK 365


>gi|283457761|ref|YP_003362349.1| protein chain release factor B [Rothia mucilaginosa DY-18]
 gi|283133764|dbj|BAI64529.1| protein chain release factor B [Rothia mucilaginosa DY-18]
          Length = 421

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 168/353 (47%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  ++    ++  + +     D      +  +A+S   S+++          D+  ++ 
Sbjct: 71  DIEGIERAIEDLSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRSLSSRIDDVEVMVE 130

Query: 68  DHNSDSEIRDLAQ-IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              ++ E        +      EIR    E+  L+L     D +  ++ IR+G GG +AA
Sbjct: 131 LAEAEDEETAAELLADAERECAEIRAKLEELEVLVLLSGEYDQREAVVTIRSGAGGVDAA 190

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            F   L RMY R+A    +  +VL +S  ++ G K +   ++    F R+  E+G HR+ 
Sbjct: 191 DFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLV 250

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V V+P       ++IP  +I++D  R+SG GGQ VNTTDSAVR
Sbjct: 251 RISPFDNQGRRQTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGPGGQSVNTTDSAVR 310

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +TH+PTGI+V+  +EKSQ QNR  A++VL++RL  + +++   ++         S    +
Sbjct: 311 MTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLLRKEQEDAKKKELAGDIKAS--WGD 368

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ++R+Y     + + D R          VL G ++  I+  +    +      S
Sbjct: 369 QMRSYVLHPYQMVKDLRTGYEEGNTSNVLDGGLNAFIDAGIRWRASGRAAEES 421


>gi|319891756|ref|YP_004148631.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
           ED99]
          Length = 329

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 168/337 (49%), Gaps = 17/337 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M++    D   +         AI  +++      +  +E    + ++ +   D    DL
Sbjct: 1   MMADPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQEEYDDEMKDDL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            Q  +    K  +         LL     D  + ILE+  G GG+E+  +   L RMY+R
Sbjct: 61  EQEVIGFQTKVDQ-----FELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + +KVE++     D+ G K +   + G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEQQGFKVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEIDV--DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+PE     +  +I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V 
Sbjct: 176 TSFASCDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+A+LY +E ++   E +A R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKAKLYQLELEQKEQELAAIRGEQKDIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
              + DHR N     +  V+ G I   I   L     
Sbjct: 293 YSMVKDHRTNEETGNVNAVMDGEIGPFIEAYLRHQMQ 329


>gi|71893491|ref|YP_278937.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae J]
 gi|119361562|sp|Q4AAJ5|RF1_MYCHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71851618|gb|AAZ44226.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae J]
          Length = 361

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 152/349 (43%), Positives = 234/349 (67%), Gaps = 8/349 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  +  ++ +++  +     ++   +   + +E A+IS II     +   ++  +D  T+
Sbjct: 9   LMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLEDAKTI 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D E+  LA++E+  + K I E E ++  L+LPKD +D+K  I+EIR   GG EA
Sbjct: 69  LIQE-DDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEA 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +FVGDLF+MY ++A  +K KV+VLSSS    GG+ +I+  ISG+ ++S++KFESGVHRV
Sbjct: 128 NIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRV 187

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVPATE  GR+HTS ATV V+P+  E  +++I   D++IDT R+SG+GGQ VNTTDSAV
Sbjct: 188 QRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAV 247

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V +  E+SQ  N+  AM +L++++Y++E ++   ++S  RKL  GSG RS
Sbjct: 248 RITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLA-GSGARS 306

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           E+IRTYN+ Q R+TDHRIN +   L+ ++QG ++ II  LL   + ++I
Sbjct: 307 EKIRTYNYPQDRLTDHRINFSTS-LKPIIQGSLNPIIEALLAQEKTELI 354


>gi|269795803|ref|YP_003315258.1| peptide chain release factor 2 [Sanguibacter keddieii DSM 10542]
 gi|269097988|gb|ACZ22424.1| bacterial peptide chain release factor 2 (bRF-2) [Sanguibacter
           keddieii DSM 10542]
          Length = 372

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 168/351 (47%), Gaps = 18/351 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG-- 67
             LK R AE+  + S     D      +   A+S   +++      +    DL  ++   
Sbjct: 27  EALKIRIAELSDQASAPDLWDDTDAAQKVTTALSQAQTELDRIVNMESRIDDLEVLVEMA 86

Query: 68  ---DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
              D   D E  + AQ ++  I +++ +LE       L     D +  ++ IRAG GG +
Sbjct: 87  TEGDGADDVETLEEAQKDLDGIRRDLGDLEV----RTLLSGEWDAREAVVSIRAGAGGVD 142

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA F   L RMY R+A    +   VL +S  ++ G K     +     F  +  E+G HR
Sbjct: 143 AADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGNLSVEAGTHR 202

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +  GR  TS A V V+P   +   VDIP  +IR+D  R+SG GGQ VNTTDSA
Sbjct: 203 LVRISPFDNQGRRQTSFAAVEVIPLIESTDHVDIPDNEIRVDVFRSSGPGGQSVNTTDSA 262

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--G 300
           VR+THIPTGI+V+  +EKSQ QNR  AM+VL++RL          +  A +K   G    
Sbjct: 263 VRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLL----ERQAQEKAMKKEMAGDVKA 318

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              +++R+Y     + + D R    +     V  G IDD I   +   ++K
Sbjct: 319 SWGDQMRSYVLQPYQMVKDLRTEHEVGNTSAVFDGEIDDFIEAGIRWRRSK 369


>gi|139438906|ref|ZP_01772366.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
           25986]
 gi|133775617|gb|EBA39437.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
           25986]
          Length = 382

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 166/347 (47%), Gaps = 13/347 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + + + R +E+E +       D         EE A     I+ +     +  + +    +
Sbjct: 28  LDEKRTRVSELEAKSVAPGFWDDADAARATMEEIARTKEDIAAVDTARGELSDARAALEL 87

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +   D +   L +      E+  R + +E+          D    I+ I+ G GG EA
Sbjct: 88  AEEMGDDPDAAALREEAAATAERLARAI-DELELSSWFTGEFDHGDAIVTIKPGQGGLEA 146

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   LF+MY +Y   R WKV +      +  G      T+ G+  F  ++ E+GVHR+
Sbjct: 147 QDWTFMLFKMYMKYCQRRGWKVTINDCPAAEVIGIDRATFTVEGKDAFGMLRAEAGVHRL 206

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+  T+   R  T+ A V V+P    +ID++I  +DIR+D   ASG GGQ VNTTDSAV
Sbjct: 207 VRISPTDDKRRRQTTFAGVEVIPVLPDDIDIEISPDDIRVDVYHASGPGGQGVNTTDSAV 266

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           R+TH P+GI+V   +E+SQ QN+   M++L+ARLY++E ++ A      R  K  IG G+
Sbjct: 267 RVTHFPSGIVVTCQNERSQIQNKAACMQILKARLYEIELEKRAEALDEIRGPKTTIGFGN 326

Query: 302 RSERIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTA 346
              +IR+Y  +    + D R  +    +E VL  G +D  +      
Sbjct: 327 ---QIRSYVLYPYQMVKDLRSGVETSNVEAVLDDGDLDPFVIGYHRW 370


>gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
 gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
          Length = 380

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 89/343 (25%), Positives = 164/343 (47%), Gaps = 16/343 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   ++R + I+   +     D   K     +E + +   +       +   + Q L  
Sbjct: 31  DLDRKRSRISLIDRDSTLPNFWDDNTKAQALLKEKSTLEASVGAFDKALRGLDDAQTLME 90

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + N ++  ++   +        +     ++    +    +D  +C ++I AG GG++
Sbjct: 91  LAREANDEASAQEAEGL-----LPTLEGDIAKLELARMLSGENDRSNCFMDINAGAGGTD 145

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+   R W+VE+      ++ G+K +   I G   +  +K E GVHR
Sbjct: 146 SMDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEVGVHR 205

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+ R  T+ A+V V PE    I +DIP +D  +  +R  G+GGQ VN T S 
Sbjct: 206 LVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSST 265

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSG 300
            ++ H+PT I++   +E+SQ  N+  A K+LRARLY++E K+   ER  +  +K  I  G
Sbjct: 266 AQLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKDISFG 325

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
               +IR+Y  +  R + D R  +    ++ VL G ++  +  
Sbjct: 326 ---SQIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTA 365


>gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
 gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU]
 gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
 gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
 gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900]
 gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606]
 gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
 gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
 gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
 gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
 gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU]
 gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
 gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
 gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606]
 gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2]
 gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
 gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
 gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
          Length = 310

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 163/316 (51%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ + +  +  + + +S + D+      +      E  
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQ-----SELSTAEEEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI+AG+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V + PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E ++         + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRAKLYELEMQKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDRFIEASLKQ 308


>gi|222637229|gb|EEE67361.1| hypothetical protein OsJ_24645 [Oryza sativa Japonica Group]
          Length = 498

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 165/353 (46%), Gaps = 9/353 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+   A +E + ++S   D   K  E   A++ +  ++ + +  K + ++  T++  
Sbjct: 146 LDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKLQVEEAETIVKL 205

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E   I K + +  +      L     D +  ++ I AG GG++A  +
Sbjct: 206 TEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDW 265

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R 
Sbjct: 266 ADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQ 325

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS A V V+P   E  +D  IP ED+ I   RA G GGQ+VN  ++AVR+
Sbjct: 326 SPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRM 385

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTGI V  + E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 386 VHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQ 444

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           IR Y F   + + D R       +  V+ G +D  I   L       + +A+E
Sbjct: 445 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKY----KLSAAAE 493


>gi|220905200|ref|YP_002480512.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869499|gb|ACL49834.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 370

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 179/347 (51%), Gaps = 16/347 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           + R   IE  +S   + D    LT   +E   +   +++++       +  +   +  + 
Sbjct: 31  EKRLQAIETEISRPGAWDKPEALTPLLQEKRRLEDEVARLNKLKTCHDDMNEWLALAAES 90

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
                +  LA       +K++  L +E   ++L    +D +  ILEI  G GG+E+  + 
Sbjct: 91  EDPEALESLA-----QQQKDLAALLDETELVMLLSAEEDSQDAILEIHPGAGGTESQDWA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+AA   +KVE L     D+ G K +   + G   F  +K E G+HR+ R+ 
Sbjct: 146 EMLLRMYTRWAADHDYKVEELDFLPGDEAGVKSVTLRVGGPHAFGFLKSERGIHRLIRIS 205

Query: 190 ATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++SGR HTS A+V V+P+A  +I++D+   D+R+D  R+SG GGQ VNTT SAVRITH
Sbjct: 206 PFDSSGRRHTSFASVDVIPDAGDDIELDLKEADLRVDIFRSSGPGGQSVNTTSSAVRITH 265

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
           IP+GI     +EKSQH N+  A++VLRARLY++E ++    R A    K  I  G    +
Sbjct: 266 IPSGISAQCQNEKSQHHNKETALRVLRARLYNMELEKREAARQAQYAGKDAIAFG---SQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           IRTY     R + DHR    +  ++ VL G ID   +  L     + 
Sbjct: 323 IRTYTLQPYRLVKDHRTGTEVGDVDAVLDGQIDAFQHDYLLHRHEQQ 369


>gi|86152591|ref|ZP_01070796.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843476|gb|EAQ60686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 365

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 184/346 (53%), Gaps = 12/346 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
            +++ R  EIE   +         +        + I + +  Y+       D   +  + 
Sbjct: 27  ENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASGLFDLA 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +  +D+E  +    +   +E  I  LE  +         +D K+ I+ I  G GG+E+  
Sbjct: 87  NSENDTETLEALFNDAPKLEDTITSLEISML----LSGENDGKNAIVSIHPGAGGTESND 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +KVE L   + ++ G K++   + G   +  +K E+G+HR+ R
Sbjct: 143 WASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               +++GR HTS ++V V PE   +I+++I  +DIRID  RASG+GGQHVN T+SAVRI
Sbjct: 203 TSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH PTGI+V   +++SQH+N+  A K+L++RLY++E  +  +  +   K +IG G    +
Sbjct: 263 THFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWG---HQ 319

Query: 306 IRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR+Y  F   ++ D+R      +++ +L G I  +I  +L A +A+
Sbjct: 320 IRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKAE 365


>gi|119358306|ref|YP_912950.1| peptide chain release factor 2 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355655|gb|ABL66526.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 363

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 9/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + + K +  ++E   ++    +   +       +S   S    +D+ +   +     + 
Sbjct: 23  DVDERKEKIDDLEKITADPGFWNDQQEANRTLKELSEHKSWTGAFDKLEAAAKTSGEELT 82

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D    +    E++A    I      I +  +    DD  + I+ I AG GG+EA  
Sbjct: 83  IA--DELQDESFADELIASIAAIESGIAAIEFRNMLSGKDDPGNAIITIHAGAGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+A  + +KV      + D  G K     I G   +  +K E+GVHR+ R
Sbjct: 141 WAEMLYRMYMRWAERKGFKVFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V   +++ R HTS A+V   PEA    ++D+  ED+ + T R+ G GGQ+VN  ++AVRI
Sbjct: 201 VSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVETAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
            HIP+GI+V    E+SQ QNR RAMK+L A+LY  +R+     +     +K +I  G   
Sbjct: 261 KHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREIEGKKKKIEWG--- 317

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +IR+Y     RI DHR N   + +E VL G +D  +   L+ 
Sbjct: 318 SQIRSYVLDDRRIKDHRTNYERFDVETVLDGDLDTFMEKYLSE 360


>gi|89068846|ref|ZP_01156229.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
 gi|89045616|gb|EAR51679.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
          Length = 374

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 121/336 (36%), Positives = 170/336 (50%), Gaps = 10/336 (2%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSD 72
           R  E   R+ +    D      +       ++  I  YD   +E  D   +I   +   D
Sbjct: 31  RLEEFNARVEDPTLWDDPAAAQKLMRERQALVDSIETYDGIARELADNVELIELGEMEDD 90

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
           SE+   A+  + A+++   + E       L     D     LEI AG GG+EA  +   L
Sbjct: 91  SEVVAEAEAALAALKERAAQKEL----EALLDGEADGNDTFLEINAGAGGTEACDWAQML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  R +KVE+ S     + G K +   ISG   +  +K ESGVHR+ R+    
Sbjct: 147 QRMYVRWAEKRGYKVELQSEEAGTEAGIKSVSYKISGPNAYGWLKSESGVHRLVRISPFG 206

Query: 193 ASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
             G   TS A+V V P     I+++I   +IR+DT R+SG+GGQHVNTTDSAVRITH+PT
Sbjct: 207 K-GTRETSFASVWVYPVVDDNIEIEINPSEIRLDTYRSSGAGGQHVNTTDSAVRITHLPT 265

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           GI+VTSSEKSQHQNR  AMK L++RLY +E  R   + +A  + + GS     +IR+Y  
Sbjct: 266 GIVVTSSEKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHEAK-GSAGWGNQIRSYVL 324

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + + D R          VL G +D  +   L  
Sbjct: 325 QPYQMVKDLRTGHETSDTGGVLDGALDGFMAATLAM 360


>gi|15618982|ref|NP_224772.1| peptide chain release factor 2 [Chlamydophila pneumoniae CWL029]
 gi|7388054|sp|P56906|RF2_CHLPN RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 167/345 (48%), Gaps = 11/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +     +E   SE       +   +    I  +  +I  Y + K +   +   + 
Sbjct: 25  DLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAIEFFLE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D ++  +       ++        +         L     D  SC L I AG GG+E+  
Sbjct: 85  DADALEDPA--ICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTESCD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  LFRMY R+A   +W +EV+   D +  G K +    SG   +   K E GVHR+ R
Sbjct: 143 WVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++G+ HTS A+V V PE  +   ++I   D+RIDT R+SG+GGQHVN T+SAVRI
Sbjct: 203 ISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           TH+P+G++V   +E+SQ QNR   MK+L+A+LY    +    ++S +RK   +I  G   
Sbjct: 263 THLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWG--- 319

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTA 346
            +IR Y F     + D R       ++ +L G  +D+ I   L  
Sbjct: 320 SQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLAE 364


>gi|299739044|ref|XP_001835016.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130]
 gi|298403596|gb|EAU86782.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130]
          Length = 345

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 143/344 (41%), Positives = 204/344 (59%), Gaps = 13/344 (3%)

Query: 19  IELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           I   MS+   V    ++        P+      + + ++   + + ++ D   D  +R +
Sbjct: 4   ISEDMSDKDDVSRLKQV----KESEPLQEAWDQWKETRKLLDETNALLSDP--DPSMRAM 57

Query: 79  AQIEVLAIEKEIREL-ENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
           A  E  A+   ++ L E+    LLLP       S +LE+++G GGSE++LF GDL RMY+
Sbjct: 58  ASEESTALNSTLQTLVESTFPSLLLPPSPTAQLSALLELKSGVGGSESSLFAGDLLRMYQ 117

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R A  R WK E+ + +D DDGG K+++  I G G +  +++ESGVHRVQRVPATE+ GRV
Sbjct: 118 RLAVQRGWKAEIAAKNDTDDGGVKDVIMEIKGVGAYDALRWESGVHRVQRVPATESKGRV 177

Query: 198 HTSAATVAVLP----EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           HTSA  V VLP         +    +ED++I+ MRA G+GGQHVN T+SAVR+THIP+GI
Sbjct: 178 HTSAVAVLVLPLVEENDTHGEDLFKMEDVKIEVMRARGAGGQHVNRTESAVRLTHIPSGI 237

Query: 254 MVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFS 312
            V+   E+SQHQNR RA +VLR+RL D +  R   ER A R+  +   DRS++IRTYNF 
Sbjct: 238 TVSMQDERSQHQNRRRAFQVLRSRLLDQKIHREMAERRATRRNLVSGSDRSDKIRTYNFP 297

Query: 313 QGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           Q R+TDHRI LTL  L  VL+G  ++D I+ +        +   
Sbjct: 298 QERVTDHRIGLTLTNLSSVLEGEGLEDFIDAIQKHQNETAMEEM 341


>gi|72080478|ref|YP_287536.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 7448]
 gi|119361561|sp|Q4A8M6|RF1_MYCH7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71913602|gb|AAZ53513.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae 7448]
          Length = 361

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 151/349 (43%), Positives = 234/349 (67%), Gaps = 8/349 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +  +  ++ +++  +     ++   +   + +E A+I+ II     +   ++  +D  T+
Sbjct: 9   LMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVLEDAKTI 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D E+  LA++E+  + K I E E ++  L+LPKD +D+K  I+EIR   GG EA
Sbjct: 69  LIQE-DDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEA 127

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            +FVGDLF+MY ++A  +K KV+VLSSS    GG+ +I+  ISG+ ++S++KFESGVHRV
Sbjct: 128 NIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRV 187

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVPATE  GR+HTS ATV V+P+  E  +++I   D++IDT R+SG+GGQ VNTTDSAV
Sbjct: 188 QRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAV 247

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V +  E+SQ  N+  AM +L++++Y++E ++   ++S  RKL  GSG RS
Sbjct: 248 RITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLA-GSGARS 306

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           E+IRTYN+ Q R+TDHRIN +   L+ ++QG ++ II  LL   + ++I
Sbjct: 307 EKIRTYNYPQDRLTDHRINFSTS-LKPIIQGSLNPIIEALLAQEKTELI 354


>gi|238796545|ref|ZP_04640052.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
 gi|238719523|gb|EEQ11332.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
          Length = 303

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 104/308 (33%), Positives = 164/308 (53%), Gaps = 12/308 (3%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
             I++ I   DQ  ++   L  +  + + +    +       A    +     ++ +  +
Sbjct: 2   EEIVTTIDQLDQGMEDVTGLLELAIEADDEETFNEAV-----AELDILDGKLGQLEFRRM 56

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D  +C L+++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K 
Sbjct: 57  FSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKS 116

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLED 221
               I G   F  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D
Sbjct: 117 ATIKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPAD 176

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK L+A+LY+ 
Sbjct: 177 LRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEF 236

Query: 281 ERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDD 338
           E ++   ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D 
Sbjct: 237 EMQKKNADKQVLEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDK 293

Query: 339 IINPLLTA 346
            I   L A
Sbjct: 294 FIEASLKA 301


>gi|297735238|emb|CBI17600.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 97/341 (28%), Positives = 162/341 (47%), Gaps = 5/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+   A +E++ ++S   D   K  E   A++ +  KI +    K + +D  T++  
Sbjct: 101 LQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKL 160

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E   I KE+ +  +      L     D +  ++ I AG GG++A  +
Sbjct: 161 TEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 220

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R 
Sbjct: 221 ADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQ 280

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS + V V+P   E  +D  IP ED+ I   RA G GGQ+VN  ++AVRI
Sbjct: 281 SPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRI 340

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG+ V  + E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 341 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQ 399

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR Y F   + + D R       +  V+ G ++  I   L 
Sbjct: 400 IRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLK 440


>gi|241998776|ref|XP_002434031.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215495790|gb|EEC05431.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 356

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 136/345 (39%), Positives = 209/345 (60%), Gaps = 6/345 (1%)

Query: 16  FAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN--SD 72
             ++E  + + S       +LT + + +S I++ +   ++  +E + L  +  D     D
Sbjct: 6   LKQVEEELEKCSHDSQRTRELTAKMSRLSSIVALVKKINELNREMEGLKDLERDFTRTGD 65

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            ++  +A  +    + E+++L ++I   ++P D  D    +LE+ AG GG EA LF  D+
Sbjct: 66  KDMVSMAVDDQKNCQAELKQLNDQILDQIVPPDPIDTTEVLLEVTAGVGGQEAMLFTKDV 125

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
             MY RYA+ + W   ++    +D GG +     + GR     +KFESGVHRVQRVP TE
Sbjct: 126 LDMYVRYASWKGWSCRIVDYETSDMGGVRHASLNVGGRDAGKCLKFESGVHRVQRVPQTE 185

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
            +GR+HTS   VAVLP  AE+DV +  +D+ + T RASG GGQHVNTT+SAV+I HIP+G
Sbjct: 186 RAGRIHTSTMAVAVLPLPAEVDVVLNSKDLVMKTKRASGPGGQHVNTTESAVQIQHIPSG 245

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           IMV +S E+SQ QN+  A+K LRA+LY++E  +  +     RKLQ+G+  RSE+IRTYNF
Sbjct: 246 IMVESSQERSQLQNKELALKKLRAKLYEIELNKKTSSHVTQRKLQVGTRGRSEKIRTYNF 305

Query: 312 SQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +Q R+TDHRI +T++ +E  L G   +D +I  LL   + +++  
Sbjct: 306 AQDRVTDHRIPVTVHNVEDFLHGQDNLDSVIRRLLDESRKEILLE 350


>gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1]
 gi|238688991|sp|B1VV08|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1]
          Length = 368

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 93/345 (26%), Positives = 156/345 (45%), Gaps = 7/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDALRADIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETLRGRIDDLEVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +    A+ E           E  +    L     D +  ++ IRA  GG +AA 
Sbjct: 85  LAADEGDADAQAEAEAELESVRKALDE--MEVRTLLSGEYDAREALVTIRAEAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K EV  ++  ++ G K     +     +  +  E G HR+ R
Sbjct: 143 FAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRL 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    + +A +    G      +
Sbjct: 263 THLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD--GGNSWGNQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +R+Y     + + D R    +   E V  G ID  +   +   + 
Sbjct: 321 MRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRKQ 365


>gi|50730809|ref|XP_417026.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 455

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 131/363 (36%), Positives = 208/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRM-SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K +  L   + +++  + ++S +      L    A +SP+ +      + + E Q+L T
Sbjct: 83  QKYLETLSKEYQQVDHLLNADSKNEFEQRTLRRRRADLSPVATAFQEIREAESELQELET 142

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +  + +   + ++ +LA  E   ++K+I  L  ++  LL+PK+  D    ILE+ AG  T
Sbjct: 143 MCRELDSRDEKQLLELALEEKETLDKKINTLCRKLFQLLVPKEKYDKSHVILEVTAGRTT 202

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ YA  + W  ++L+    + GG     A ISG  V+  +K+E 
Sbjct: 203 GGDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEG 262

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G HRVQR+P T  S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 263 GTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGGQHV 322

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVRI H+PTG++V    E+SQ  N+  A++ LRA+LY    ++  ++  + RKLQ
Sbjct: 323 NKTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQIIEKQLSQEQSARKLQ 382

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI+     ++ +L G   +D +IN LL   + + +  
Sbjct: 383 LGTRAQSERIRTYNFTQDRVTDHRISYDARNIKEILSGKEELDKLINRLLEFAEMEALTE 442

Query: 355 ASE 357
             E
Sbjct: 443 YLE 445


>gi|145222895|ref|YP_001133573.1| peptide chain release factor 1 [Mycobacterium gilvum PYR-GCK]
 gi|315443360|ref|YP_004076239.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           Spyr1]
 gi|189039980|sp|A4T8L3|RF1_MYCGI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145215381|gb|ABP44785.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
           gilvum PYR-GCK]
 gi|315261663|gb|ADT98404.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           Spyr1]
          Length = 357

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 140/328 (42%), Positives = 194/328 (59%), Gaps = 17/328 (5%)

Query: 14  NRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
             + E+E R+++           K+   +A ISPI++     +  + + +    +  D  
Sbjct: 13  AEYGELEQRLADPDLHADAGAARKVGRRFAQISPIVATYRKLEAARGDLEAARELAADDA 72

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           S +   D    ++         L+  +  LL P+D  D    +LE+++G GG E+ALF  
Sbjct: 73  SFAAEVDELTDQIGD-------LDRALTDLLAPRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-----RGVFSRMKFESGVHRV 185
           DL RMY RYA    W V +L  + +D GGYK+   +I+       GV++R+KFE GVHRV
Sbjct: 126 DLARMYIRYAERHGWTVTMLGETTSDLGGYKDATLSIASKGDSADGVWARLKFEGGVHRV 185

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           QRVP TE+ GRVHTSAA V V PE  E   V I   D+R+D  R+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRVDVYRSSGKGGQGVNTTDSAV 245

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V   +E+SQ QN+ RAM+VL ARL  +  ++ + + SA+R  QI + DRS
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRS 305

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYV 331
           ERIRTYNF + RI DHRIN   + L+ V
Sbjct: 306 ERIRTYNFPENRIADHRINFKAHNLDQV 333


>gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 332

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 170/332 (51%), Gaps = 17/332 (5%)

Query: 23  MSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+E    D   K  +      A+  +++     +++ ++      ++ +        DL 
Sbjct: 1   MTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                    + +E  ++    LL     D  + ILE+  G GG+E+  +   L RMY+RY
Sbjct: 61  -----QNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 GEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A+  V+PE      +++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V  
Sbjct: 176 SFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNN 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG 314
            +E+SQ +NR  AMK+L+A+LY ++ +    E +  R  Q  IG G    +IR+Y F   
Sbjct: 236 QNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWG---SQIRSYVFHPY 292

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             + DHR N    K++ V+ G I   I   L 
Sbjct: 293 SMVKDHRTNEETGKVDAVMDGEIGPFIESYLR 324


>gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF]
 gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii]
          Length = 310

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ + +  +  + + +S + D+      +      E  
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQ-----SELSTAEEEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI+AG+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V + PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E ++      A    K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRAKLYELEMQKRNEAAQALEDLKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDRFIEASLKQ 308


>gi|307243612|ref|ZP_07525755.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
           17678]
 gi|306492981|gb|EFM64991.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
           17678]
          Length = 348

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 186/349 (53%), Gaps = 9/349 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +SH  +  L++R  +IE  M+E    +   K  +       I  +++ Y Q     +D++
Sbjct: 1   MSHFDLKGLESRKVDIEKLMAEQDFWEDTDKSNKILQENKTIEVRLTQYSQLITSIEDIN 60

Query: 64  TVIGDHNSDSEIRDLAQIE-VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++     DS   D      ++   K+ RE  + +   +L     D  + IL + +GTGG
Sbjct: 61  ILLELSEEDSTEEDQEIENSIIDQVKDARENLDRMTMEMLFSGQYDSNNAILSVNSGTGG 120

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            +A  +   L RMY R++    +KV+++  + + + G K     + G+  +  +K E GV
Sbjct: 121 LDAQDWAQMLLRMYIRWSESSGYKVKLIDINSDPEAGIKTATILVQGQNAYGHLKSEKGV 180

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   ++SG+ HTS A++ V+PE   +I V+I   D++IDT R+SG+GGQHVNTTD
Sbjct: 181 HRLVRISPFDSSGKRHTSFASIDVVPELNEDIKVEINQTDLKIDTYRSSGAGGQHVNTTD 240

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIG 298
           SAVRITHIPTGI+V   +E+SQH N+  AMK+L A+L  ++ +         +    QI 
Sbjct: 241 SAVRITHIPTGIVVQCQNERSQHSNKDIAMKLLMAKLIQLKEEENKERIEDLQGKYSQIT 300

Query: 299 SGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            G    +IR+Y F   + + DHR N     ++ V+ G +D+ +   L  
Sbjct: 301 WG---SQIRSYVFQPYKLVKDHRTNEENANVDAVMDGKLDNFMFEYLKQ 346


>gi|225430898|ref|XP_002276037.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 454

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 97/341 (28%), Positives = 162/341 (47%), Gaps = 5/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+   A +E++ ++S   D   K  E   A++ +  KI +    K + +D  T++  
Sbjct: 104 LQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKL 163

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E   I KE+ +  +      L     D +  ++ I AG GG++A  +
Sbjct: 164 TEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 223

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R 
Sbjct: 224 ADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQ 283

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS + V V+P   E  +D  IP ED+ I   RA G GGQ+VN  ++AVRI
Sbjct: 284 SPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRI 343

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG+ V  + E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 344 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQ 402

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR Y F   + + D R       +  V+ G ++  I   L 
Sbjct: 403 IRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLK 443


>gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
 gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
          Length = 368

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 187/347 (53%), Gaps = 14/347 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +L+ + +EIE++ ++    +       L +E   I+ ++           +  +L  + 
Sbjct: 27  NELRVKLSEIEMQENDPNFWNNAKNAAVLGKEKTKITNLLKAYENAFNALNDANELFDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N D  ++      +     ++ +    +   +L    +D+K+ I+ I  G GG+E+ 
Sbjct: 87  NSENDDETLKA-----LFEDAPKLEDNITSLEISMLLSGENDNKNAIVSIHPGAGGTESN 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+     +KVE L   + D+ G K++   + G   +  +K E+G+HR+ 
Sbjct: 142 DWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLKAENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++GR HTS ++V V PE   +I+++I  +D+RID  RASG+GGQHVN T+SAVR
Sbjct: 202 RTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPT I+V   +++SQH+N+  A K+LR+RLY++E  +     ++  K ++G G    
Sbjct: 262 ITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAVANSGEKSEMGWG---H 318

Query: 305 RIRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +IR+Y  F   ++ D R N      E +L G I  +I  +L A +A+
Sbjct: 319 QIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMKAQ 365


>gi|225350864|ref|ZP_03741887.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158320|gb|EEG71562.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 376

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 172/348 (49%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L  +  ++E++ +E    D      +  + +S + S++       Q   D+ T+  
Sbjct: 25  DVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLSAVQSQLKRLASASQRIDDVETLVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G    D++    AQ EV +I+ ++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGQEEEDADTLAEAQSEVESIQNDLADMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K +V+ +S  ++ G K     +     + RM  E G HR+
Sbjct: 141 ADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +D+P  +IR+DT  +SG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +++R+Y     + + D R      + + V  G ID  I   +     +
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWRHEQ 366


>gi|306823395|ref|ZP_07456770.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
           27679]
 gi|309802644|ref|ZP_07696748.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
 gi|304553102|gb|EFM41014.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
           27679]
 gi|308220708|gb|EFO77016.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
          Length = 380

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 103/349 (29%), Positives = 170/349 (48%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  +  E+E++ +E    D      +  + +S + S++       Q   D+ T++ 
Sbjct: 29  DVDRLTVQAKELEVQATEPGLWDDPENAQKITSKLSAVQSQLKRLASASQRIDDVETLVE 88

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D++  + A+ E+  I  ++ ++E +           D++S ++ IR+G GG +A
Sbjct: 89  LGREEEDADTLEEAKNEIEGIRHDLDDMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 144

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K +V+ +S  ++ G K     +     + RM  E G HR+
Sbjct: 145 ADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRL 204

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +D+P  +IR+DT  +SG GGQ VNTT SAV
Sbjct: 205 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAV 264

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 265 RITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 322

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +++R+Y     + + D R      + + V  G ID  I   +     + 
Sbjct: 323 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWRHEQR 371


>gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7]
 gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7]
          Length = 378

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 99/352 (28%), Positives = 167/352 (47%), Gaps = 7/352 (1%)

Query: 1   MVFLSHK--QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQE 58
           M+   H    I +   +  E+  + +E    D   K          +  K+  Y++    
Sbjct: 19  MIRELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGA 78

Query: 59  EQDLHTVIGDH-NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             D+  +I      D + +     E+ A   +++   +  +   L     D  + IL   
Sbjct: 79  ADDIEVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFH 138

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG+EA  +   L RMY ++A    +  +++   +  D G K     I G   +  +K
Sbjct: 139 AGAGGTEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGIKSCSMFIEGENAYGYLK 198

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
            ESG+HR+ R+   ++SG  HTS + V V+PE    I+V+I  EDI ++  RASG+GGQH
Sbjct: 199 SESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDTIEVEIRPEDIEMEVYRASGAGGQH 258

Query: 237 VNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N T SAVR+ H PTGI+    +++SQ QN+  AMK+L+A+L +++ +    +    + +
Sbjct: 259 INKTSSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKEREHLEKIEDIKGV 318

Query: 296 QIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Q        +IR+Y F     + D R       ++ V+ G +D  IN  L A
Sbjct: 319 Q-KEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAYLKA 369


>gi|154507630|ref|ZP_02043272.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797264|gb|EDN79684.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
           17982]
          Length = 373

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 95/349 (27%), Positives = 165/349 (47%), Gaps = 5/349 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ +  E+  + +     D         +A+S   S++    Q  +   DL  ++   
Sbjct: 26  DKLREQIVELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERIDDLEAMVDMA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D +       E  A  +++R+   ++    L     D+++ ++ IR+G GG +AA F 
Sbjct: 86  AEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +  +V+ +S  ++ G K     +     +  +  E+G HR+ R+ 
Sbjct: 146 EILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRIS 205

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V V+P       ++IP  ++++D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 206 PFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTH 265

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V+   EKSQ QNR  A++VL++RL  +  +    ++         S    +++R
Sbjct: 266 IPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS--WGDQMR 323

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +Y     + + D R        + V  G ID  IN  +   + +   + 
Sbjct: 324 SYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRKNEQKAAQ 372


>gi|301100688|ref|XP_002899433.1| peptide chain release factor, putative [Phytophthora infestans
           T30-4]
 gi|262103741|gb|EEY61793.1| peptide chain release factor, putative [Phytophthora infestans
           T30-4]
          Length = 378

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 178/345 (51%), Gaps = 15/345 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
              AE+    ++    D         +  AA+    +++    ++  + ++L+ +  +  
Sbjct: 32  QELAELRQEAADPKLWDDASNAASVVQRLAALESRETRVHELHRQFLDTKELYVLAKEEE 91

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +S + D      +   +  +     +    L     D  SC LEI+AG GG+++  +  
Sbjct: 92  DESMLGDCVSAMTVVRAEAQQ-----LRLEFLLSHETDAHSCFLEIQAGAGGTDSCDWTA 146

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R++ +R ++V+ +  S  D+ G++ +V  + G   +   K E+GVHR+ R+  
Sbjct: 147 MLARMYARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNEAGVHRLVRISP 206

Query: 191 TEASGRVHTSAATVAVLPE----AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
            +++GR HTS A V V P      +  ++++  +D+RIDT R+SG GGQHVN+TDSA+RI
Sbjct: 207 FDSAGRRHTSFAQVRVYPMAAEGRSSAEIEVSTKDLRIDTFRSSGPGGQHVNSTDSAIRI 266

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+ TGI+V + S++SQH+N+  AM +LRA+LY  + +  A  R    +   G      +
Sbjct: 267 THLRTGIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQGL-GDNAWGNQ 325

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           IR+Y     + + DHR N +   +  VL G ID  I  +L    A
Sbjct: 326 IRSYVLHPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKMLLHQTA 370


>gi|126735602|ref|ZP_01751347.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
 gi|126714789|gb|EBA11655.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
          Length = 374

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 111/335 (33%), Positives = 168/335 (50%), Gaps = 5/335 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  +  YD   QE  D   +I     + +
Sbjct: 31  RLEEFNARVEDPTLWDDPEAAQKLMRERQLLVDAMGNYDSINQELSDNIELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
              +A+ E   ++   +    +     L     D     LEI AG GG+E+  +   L R
Sbjct: 91  AEVVAEAEAALVKLADKA--AKKELEALLDGEADGNDTFLEINAGAGGTESCDWANMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ +    D+ G K     ISG   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQAEQSGDEAGIKSASYKISGHNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++++   DIR+DT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFTSVKVYPVVDDNIEIEVNPADIRLDTYRSSGAGGQHVNTTDSAVRITHHPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  A+K L++RLY +E  + +   +   +   G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAIKALKSRLYQMELDKRSTLVNEAHENA-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + + D R N      + VL G +D ++   L   
Sbjct: 328 YQMVKDLRTNFETSDTKGVLDGDLDGLMAATLAMD 362


>gi|260550208|ref|ZP_05824421.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
 gi|260406736|gb|EEX00216.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
          Length = 310

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ + +  +  + + +S + D+      +      E  
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLVDVQ-----SELGTAEEEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI+AG+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V + PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+THIP+GI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPSGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E ++         + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRAKLYELEMQKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDRFIEASLKQ 308


>gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 348

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 115/353 (32%), Positives = 185/353 (52%), Gaps = 10/353 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            ++   + +++N+  E+  +  +    D      +     +   SKI  YD+  +   + 
Sbjct: 1   MVNLFDLSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEA 60

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I     + +       ++    + I +L N+     L     D  +CI+ I AG GG
Sbjct: 61  EDLIDLMEMEDDY--SFYGDLKLDLENIEKLSNDFKLETLLNGEYDSNNCIISIHAGAGG 118

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +   L RMY RYA  R ++VE L     ++ G K +   I+G   +  +K E GV
Sbjct: 119 TEAQDWASMLNRMYVRYAEKRGFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGV 178

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+ R HTS A++ V P+   + +V+I  ED++IDT R+SG+GGQHVNTTD
Sbjct: 179 HRLVRISPFDANKRRHTSFASLDVYPQLDDDNEVEIKAEDLKIDTYRSSGAGGQHVNTTD 238

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIG 298
           SAVRITHIPTGI+V   +E+SQ QNR +AM +L+A+L  +  +    +    +    QI 
Sbjct: 239 SAVRITHIPTGIVVQCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIA 298

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            G    +IR+Y F     + DHR N  +  +  V+ GY+D+ IN  L  + +K
Sbjct: 299 WG---SQIRSYVFQPYTLVKDHRTNTEIGDVNKVMDGYLDEFINSYLQLNASK 348


>gi|183602511|ref|ZP_02963876.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683556|ref|YP_002469939.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190585|ref|YP_002967979.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195991|ref|YP_002969546.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218152|gb|EDT88798.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621206|gb|ACL29363.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248977|gb|ACS45917.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250545|gb|ACS47484.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289178324|gb|ADC85570.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
           animalis subsp. lactis BB-12]
 gi|295793572|gb|ADG33107.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 377

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 11/348 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
             LK++ AE+E + S     D      +  + +S   S++           D+ T+I   
Sbjct: 27  DRLKSQEAELEQQASAPGLWDDSEHAQKVMSQLSACQSQLKHLSSAASRLDDVATLIELG 86

Query: 69  -HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              +D++    AQ E+ +I+K++ ++E E           D +S ++ IR+G GG +AA 
Sbjct: 87  QEENDADTLHEAQTEIESIQKDLDQMEIETLM----DGEYDSRSAVVTIRSGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K +V+ +S  ++ G K     I     + RM  E G HR+ R
Sbjct: 143 FAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQIDAPYAYGRMSVEGGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P   A   +++P  +IR+DT  ASG GGQ VNTT SAVRI
Sbjct: 203 ISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPDSEIRVDTYCASGPGGQGVNTTYSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    ++
Sbjct: 263 THLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WGDQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           +R+Y     + + D R      + + V  G ID+ I   +     + +
Sbjct: 321 MRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDEFIQAGIRWRHEQRL 368


>gi|312865919|ref|ZP_07726140.1| peptide chain release factor 2 [Streptococcus downei F0415]
 gi|311098323|gb|EFQ56546.1| peptide chain release factor 2 [Streptococcus downei F0415]
          Length = 326

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 183/333 (54%), Gaps = 12/333 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D  I   +    ++ +      ++Q ++  ++    +     D+ ++     +
Sbjct: 1   MTEPDFWDDNITAQKTSQELNELKQTYDTFNQMEELSEESELYLEMLEEDASVQ----GD 56

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +     ++ ++       LL  +  D+ + ILEI  G+GG+EA  +   L RMY+RY   
Sbjct: 57  LEETLAKLDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYQRYGNA 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   +++ R HTS  
Sbjct: 117 KGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFT 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EK 260
           ++ V+PE    I+V+I  +D+++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ ++
Sbjct: 177 SIEVMPELDDTIEVEIRDDDLKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RIT 317
           +Q+ NR RAMK+L+A+LY +E+++ A E SA +  K +I  G    +IR+Y F+    + 
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAQEVSALKGDKKEITWG---SQIRSYVFTPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           DHR    + +++ V+ G ID  I+  L     +
Sbjct: 294 DHRTGYEVAQVDKVMDGDIDGFIDAYLKWRLEE 326


>gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1]
          Length = 372

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 175/345 (50%), Gaps = 16/345 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I + K R AE+    ++    D      K+ +E  ++   I K +  +   ++   L  +
Sbjct: 27  IENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERKIEKFNKLNDSLEDLITLIEL 86

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +   +S+I ++      A  +  +    +     L     D  + IL   AG GG+EA
Sbjct: 87  SIEAEDESDIEEIK-----AEAESFKSKLEDEKLSTLLTGEYDGANAILTFHAGAGGTEA 141

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L+RMY R+A   ++KVE+L   D D+ G K     I G   +  MK ESGVHR+
Sbjct: 142 QDWAEMLYRMYNRWAERHEFKVELLDYLDGDEAGMKSASILIEGENAYGYMKSESGVHRL 201

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            RV   +A GR HTS A + V+PE    I+VDI  EDI ++  R+SG+GGQ VN T SAV
Sbjct: 202 VRVSPFDAQGRRHTSFAALEVMPELDDSIEVDIRPEDIEMEVYRSSGAGGQKVNKTSSAV 261

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           R+ H PTGI+V   +++SQ+QN+  AMK+LR++L +++ +    +    +  + QI  G 
Sbjct: 262 RLIHKPTGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREHLEKIEDIKGVQNQIAWG- 320

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y F     + D R       ++ V+ G ID  IN  L 
Sbjct: 321 --SQIRSYVFMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYLK 363


>gi|302325967|gb|ADL25168.1| peptide chain release factor 2 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 389

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 5/339 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +         +E    +    +   K       I  +   I  + +  Q   DL  +  
Sbjct: 46  DLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWKEVSQTCDDLAELY- 104

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           + + D E  DL       I      +E  + +  +    DD  +C++ I  G GG+E+  
Sbjct: 105 EMSKDEESADLTATLESDIADLKSRVEA-MEFKKMLNGPDDACACLMSIHPGAGGTESQD 163

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   LFRMY  +    K   +V+   + +D G K     +S    +  ++ E GVHR+ R
Sbjct: 164 WALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGLLRSEIGVHRLVR 223

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           +   +A+ R HTS   V + PE  +++ D+ + ++R+DT R+SG+GGQ++N TDSAVR+T
Sbjct: 224 ISPFDANARRHTSFTAVYLYPEHEDVEFDLDMSEVRVDTYRSSGAGGQYINKTDSAVRMT 283

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGIM    +E+SQ QNR    K+L+  + +  R     +R A R  +    +   +I
Sbjct: 284 HLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRDA-RMAEKKKVEWGSQI 342

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+Y     + + D R  +       VL G I   I+  L
Sbjct: 343 RSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 381


>gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
 gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
          Length = 368

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 168/348 (48%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D   +  +  + +S + +++   D  +    DL  +  
Sbjct: 25  DLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKADALRSRIDDLAVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   DS+    A+ E+ +++K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDSDTLAEAESELTSVKKALDEMEV----RTLLSGEYDSREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  + +K E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V +LP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+       A +    G     
Sbjct: 261 RLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAAMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R +  +   E V  G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRKQQ 366


>gi|295105719|emb|CBL03262.1| peptide chain release factor 2 [Gordonibacter pamelaeae 7-10-1-b]
          Length = 363

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 162/347 (46%), Gaps = 18/347 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I D     A+++  ++     D            S +   I  YD+     +D    +  
Sbjct: 24  IDDKTAELAKLDEEIAAPGFWDDAAHAQGVSKQASNLRETIREYDEAAALLEDARAALEL 83

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D      A   +  +   +  LE          +  D    IL +  G+GG EA  +
Sbjct: 84  AGEDEAFAAEADDALARLSDLLDALE----ITSWFSERFDGGDAILTVNPGSGGLEAQDW 139

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY RYA  + WKV +L     +  G  +    I GR  F  +K E+GVHR+ R+
Sbjct: 140 TDMLYRMYVRYAEKKDWKVTILDVVPGEGIGLDKATIQIEGRNAFGMLKSENGVHRLVRI 199

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
             T+   R HT+ A V VLP    +I+VD+   D+R+D  R+SG GGQ VNTTDSAVR+T
Sbjct: 200 SPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQCVNTTDSAVRLT 259

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR---- 302
           HIPT I+V   +EKSQ QN+  A +VL+A+LY+ E ++ A E +  R      GDR    
Sbjct: 260 HIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRAQELAELR------GDRMDNT 313

Query: 303 -SERIRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR Y  +    + D R  +    ++ VL G +++ +       
Sbjct: 314 FGSQIRNYVLYPYQMVKDVRSGVETGNVDAVLDGDLEEFVIGYHKWR 360


>gi|224125026|ref|XP_002319484.1| predicted protein [Populus trichocarpa]
 gi|222857860|gb|EEE95407.1| predicted protein [Populus trichocarpa]
          Length = 488

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 17/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L  R   + +++++    D  +   K++ E+ ++   + K+   +Q+  E  D+  + 
Sbjct: 138 KKLMVRLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKVRTLEQELLEHIDMIKLA 197

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    ++ +  +                  L     D   C +E++AG GG+E+ 
Sbjct: 198 REEDDNELESEMLKALLQMRRNSNE-----KEQEALLSGEQDSCPCYIEVQAGAGGTESM 252

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + +MY+ +A    + V V+     +  G K     + G   F   K E+GVHR+ 
Sbjct: 253 DWAKMVMQMYKSWAQRHGYGVTVVDEMPGEIAGIKRATIKVDGEYAFGYAKAEAGVHRLV 312

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE--DIRIDTMRASGSGGQHVNTTDSAV 244
           R+   ++  R HTS A VAV+P   +    +P+   D+RI+  RA G+GGQHVNTT+SAV
Sbjct: 313 RISPFDSGKRRHTSFAAVAVIPILRDGFTHVPINESDLRIERFRAGGAGGQHVNTTESAV 372

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGD 301
           RI HIPTGI     +E+SQH N+  AM VL++RL   E  R A   + + +    IG G+
Sbjct: 373 RIVHIPTGITATCQNERSQHMNKDSAMAVLQSRLDQREMARQAQMNAYHTQSLTDIGWGN 432

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y     R + D R N  +   + VL+G ID  I   L+A
Sbjct: 433 ---QIRSYVLHPYRMVKDLRTNYEVTNPDSVLEGEIDGFILSYLSA 475


>gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX]
 gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida
           fusca YX]
          Length = 375

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 97/345 (28%), Positives = 163/345 (47%), Gaps = 13/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   +    ++  + ++    +      K+T   + +   +SK+     +  +   L  
Sbjct: 25  DLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVENIRSRIDDLGVLFE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +     +D+E    A+ E+ A+ K+I +LE       L     D++  ++ I A  GG +
Sbjct: 85  LAA-AENDAETLAEARRELAALRKDISDLEV----RTLLSGPYDEREALISINAQAGGVD 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA +   L RMY R+A    +  E+  +S  ++ G K     +     +  ++ E G HR
Sbjct: 140 AADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGMLRGEHGTHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +   R  TS A V V+P       ++I   ++RID  R+SG GGQ VNTTDSA
Sbjct: 200 LVRISPFDNQSRRQTSFAGVDVVPVVEQSDHIEIDESELRIDVYRSSGPGGQGVNTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V   +E+SQ QNR  AM +L+A+L + +R+    E +A R         
Sbjct: 260 VRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRGESAR--AW 317

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             ++R Y     + + D R  +       VL G ID+ IN  +  
Sbjct: 318 GTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGIRW 362


>gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101]
          Length = 356

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 6/340 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK R  ++E   S+    D   +   +   +  + +++    Q +    D    + 
Sbjct: 7   DVPALKARQQDLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAEATVE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  + +   L++      +       +      L     D +  ++ I AG GG++A  
Sbjct: 67  IYGLEPDEELLSESNEALQKLRSDL--DRWELERLLSGPYDKEGAVISINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     KV V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 125 WALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+  E    DIP +D+ I T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +AM +L A+L  + +++ A E +  R   I       +
Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           IR Y F   + + D R       ++ V+ G +D  I  LL
Sbjct: 304 IRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107]
 gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107]
          Length = 356

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 86/342 (25%), Positives = 164/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   ++    +      ++   +  + +++      +    D    + 
Sbjct: 7   DVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLKQLADWRSAIDDAKATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  +++  +    E      E+R+  +      L     D +  +L I AG GG++A  
Sbjct: 67  LYELEAD--EDMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     +V +   S+ ++ G K     + GR  +  ++ E G HR+ R
Sbjct: 125 WAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A + V+P+   ++D+DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTG+ V  + E+SQ QN+ +AM +L+A+L  + +++ A E +  R   I       +
Sbjct: 245 QHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R       ++ V+ G +D  I+  L  
Sbjct: 304 IRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLRQ 345


>gi|262370876|ref|ZP_06064200.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
 gi|262314238|gb|EEY95281.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
          Length = 310

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 160/316 (50%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +++ +     + ++ Q +  +  + + +S + D+             E  
Sbjct: 1   MAKEKGELENVLNVLDGLATQLEDAQAMLDLAVEADDESLLADVQAE-----LTSAEEEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI+AG+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V V PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+TH PTGI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E  +         + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRAKLYELEMSKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L  
Sbjct: 293 VLDGDLDKFIEASLKQ 308


>gi|149910167|ref|ZP_01898813.1| putative peptide chain release factor 2 [Moritella sp. PE36]
 gi|149806753|gb|EDM66717.1| putative peptide chain release factor 2 [Moritella sp. PE36]
          Length = 301

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 98/305 (32%), Positives = 159/305 (52%), Gaps = 12/305 (3%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           I+  I        + + L  +  +   +    +     +    +  +     + +  +  
Sbjct: 2   IVKTIDDLGTGCDDVEGLVELAVEAEDEETFAEAQHEIIGLEAQLAK-----LEFRRMFS 56

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
              D   C L+I++G+GG+EA  +   L RM+ R+    K+KVE++  S  D  G K   
Sbjct: 57  GKHDANDCYLDIQSGSGGTEAQDWANMLLRMFLRWGEAHKFKVELIEVSSGDVAGIKGAT 116

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIR 223
             + G   +  ++ E+GVHR+ R    ++SGR HTS A++ V PE  +  ++D+   D+R
Sbjct: 117 IRLGGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASIFVYPEIDDSIEIDLNPSDLR 176

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           ID  RASG+GGQHVNTT+SAVRITH+PT ++V   +++SQH+N+  AMK +RA+L+D E 
Sbjct: 177 IDVYRASGAGGQHVNTTESAVRITHLPTNLVVQCQNDRSQHKNKDAAMKQMRAKLFDHEM 236

Query: 283 KRMANE--RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
           ++   E   + + K  IG G    +IR+Y     RI D R  +     + VL G +D  I
Sbjct: 237 QKQNAEKQIAEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFI 293

Query: 341 NPLLT 345
              L 
Sbjct: 294 EASLK 298


>gi|307720247|ref|YP_003891387.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306978340|gb|ADN08375.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 365

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             ++ R  EI+   ++    +      K+ +E   +   + K +      ++ ++L+ + 
Sbjct: 27  KKIQTRLQEIQELENDQDFWNNADYAAKIQKEKTQLQRKLDKYNTAKNAVEDAKELYDMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +    +       +      + +   ++   +L     D  + IL I  G GG+E+ 
Sbjct: 87  KEEDDSESLEA-----LYEDAPNLEKQIRDMEIEVLLSGETDANNAILSIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY+R+A  R +KVEVL     D+ G K++   I G   +  +K E+G+HR+ 
Sbjct: 142 DWAEMLLRMYKRWAERRGFKVEVLDYQAGDEAGIKDVSVLIKGENAYGYLKVENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ + HTS A+V V P    +ID+ I  +DIRIDT R+SG+GGQHVN T+SA+R
Sbjct: 202 RISPFDSNAKRHTSFASVMVSPEIDDDIDITIEDKDIRIDTYRSSGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THI TG++V   +++SQH+N+  AMK+L++RLY++E +    + +   K +IG G    
Sbjct: 262 LTHIETGVVVQCQNDRSQHKNKATAMKMLKSRLYELELEEQKAKEAGIAKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y      ++ D R N     +  +L G ID++I  +L A
Sbjct: 319 QIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDNMIEGVLIA 361


>gi|294659861|ref|XP_002770657.1| DEHA2G17204p [Debaryomyces hansenii CBS767]
 gi|199434289|emb|CAR65990.1| DEHA2G17204p [Debaryomyces hansenii]
          Length = 411

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 133/362 (36%), Positives = 205/362 (56%), Gaps = 14/362 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L  K+   +K+ F  +E ++SE        +   +++ IS I+     Y  + +  Q L 
Sbjct: 48  LLLKRAESMKDEFKILETKISEGSF---DQETNVKFSNISVILDNYHKYQHEIENLQSLL 104

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   D+E+   A  E+  +  ++      +   LLP  T  D+  +LE+R G GGS
Sbjct: 105 EILHEEE-DAEMVHEASNELKEVIPKVFNFTKVLQSRLLPPVTHSDRPAMLELRPGVGGS 163

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDL  MY  +A   KWK  ++S S  ++G   E + +I   G +S ++ ESGVH
Sbjct: 164 EAALFAGDLLNMYINFANHMKWKWTMISESHGNNGSVNEAIISIDNPGAYSILRHESGVH 223

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQ 235
           RVQR+P+TE  GR+HTS A V VLP+          + +      ++RIDTMRA G GGQ
Sbjct: 224 RVQRIPSTETKGRIHTSTAAVVVLPKMSEGTESSLKDDERQFQPGEVRIDTMRAGGKGGQ 283

Query: 236 HVNTTDSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTTDSAVR+THIPTGI V   + +SQ +N+ +A  +LRARL  +ER +   E+   R 
Sbjct: 284 HVNTTDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRT 343

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIG 353
            Q+ + DRS++IRTYN+ Q R+TDHR   +LY ++  ++G  +++I+  +      + + 
Sbjct: 344 DQVTTTDRSDKIRTYNYPQNRVTDHRCGFSLYDIDGCMEGYRLNEIVENVEQHEFEERLE 403

Query: 354 SA 355
             
Sbjct: 404 DL 405


>gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
           29799]
 gi|150274357|gb|EDN01434.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
           29799]
          Length = 373

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 96/340 (28%), Positives = 169/340 (49%), Gaps = 6/340 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +   +     +E   +     +   K  +    I  +  K+    ++  E +DL T+   
Sbjct: 27  LEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKKRLGEWEDLLTLCEM 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N + +   + ++E    +      E  ++ L   +  D+  + +L I AG GG+EA  +
Sbjct: 87  GNEEEDESLVPELEEGFNKLTANMEEARLSTLFTGEYDDN--NVVLAIHAGAGGTEAQDW 144

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    ++ +V+   D D+ G K     I G   +  ++ E GVHR+ RV
Sbjct: 145 AQMLLRMYTRWAERHDFEYQVVDFQDGDEAGIKSATVMIQGENAYGHLRSEHGVHRLVRV 204

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +A+ R  TS A V V+P+   + DV+I  E+  +   R+SG+GGQH+N T SAVR+ 
Sbjct: 205 SPFDANARRQTSFAAVEVMPDLPEDADVEIRPEEYEMQVFRSSGAGGQHINKTSSAVRLI 264

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H  TGI+V   +E+SQ QN+   +++LRA+L +++ ++ A + S  + +Q+   +   +I
Sbjct: 265 HHATGIVVSCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKGVQLK-IEWGSQI 323

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y F   + + D+R       +  V+ G ID  IN  L 
Sbjct: 324 RSYVFMPYQLVKDNRSGFETSNVNGVMDGDIDGFINAYLK 363


>gi|47558936|gb|AAT35568.1| protein release factor 2 [Chlamydia trachomatis]
          Length = 368

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 178/344 (51%), Gaps = 11/344 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              +N   E+E +  +    D   +  +    I+ +  ++S +++ K +   +   + D 
Sbjct: 26  EGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDE 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S  ++    ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V
Sbjct: 86  ESSKDLEMQKELEKEFVFCERKITE--WETLRLLSGELDRSSCFLSINAGAGGTESCDWV 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             + RMY R+A+   W+VEV+   D +  G K I   + G   +   K ESGVHR+ R+ 
Sbjct: 144 EMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ + HTS A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH
Sbjct: 204 PFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITH 263

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSER 305
            PTGI+V+  +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +
Sbjct: 264 FPTGIVVSRQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           IR Y F     + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 321 IRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 364


>gi|320095989|ref|ZP_08027602.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977060|gb|EFW08790.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 372

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 5/342 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+ + AE+  + +     D   +  E  +A+S   S++    +  +   DL  ++   
Sbjct: 26  ERLRAQIAELNEKAAAPDLWDDPARAQEVTSALSHRQSELDRVVRMGERIDDLEAMVEMA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D +  +    E  A    +++  +++    L     D+++ ++ IR+G GG +AA F 
Sbjct: 86  GEDPDEAEEILDEAAADLDTLKKDVSDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFA 145

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +  +V+ +S  ++ G K     +     +  +  E+G HR+ R+ 
Sbjct: 146 EILLRMYLRWAERHGYATKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRIS 205

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V V+P   +   ++IP  ++++D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 206 PFDNQGRRQTSFAAVEVIPLIESTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTH 265

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V+   EKSQ QNR  A++VL++RL  +  +    ++         S    +++R
Sbjct: 266 IPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS--WGDQMR 323

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +Y     + + D R        + V  G ID  IN  +   +
Sbjct: 324 SYVLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGIRWRK 365


>gi|307297404|ref|ZP_07577210.1| peptide chain release factor 2 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916664|gb|EFN47046.1| peptide chain release factor 2 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 370

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 105/339 (30%), Positives = 179/339 (52%), Gaps = 12/339 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  +  +  EIE RMS+    +       E + +           +  ++ ++    I 
Sbjct: 25  DLERIDEKLKEIEKRMSDPSIWND----QREASNLGREAQSYRSTIELLRDVEEEFESIE 80

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                S   +     V  + +   +   E    +L     D  +C + I  G GG+E+  
Sbjct: 81  IAVELSGEDESYVKHVEELVRSAEKKVREFELTILLSGEYDINNCFISIHPGAGGTESQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A   ++K+ ++     ++ G K +   ++G   + +MKFE+GVHR+ R
Sbjct: 141 WASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTINLAGPHAYGKMKFEAGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ R HTS A+V+V PE  E  +++I  ED++IDT R+ G+GGQHVN TDSAVRI
Sbjct: 201 ISPFDANHRRHTSFASVSVFPEMDEVPEIEIRPEDLKIDTYRSGGAGGQHVNKTDSAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
           TH+PTGI+V   +E+SQHQN+  AMK+L A+L+++E ++  +E+      + +I  G+  
Sbjct: 261 THLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKRSEKLKLMGDQKEISWGN-- 318

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIIN 341
            +IR+Y F     + DHR +     ++ V+ G ID+ I 
Sbjct: 319 -QIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIE 356


>gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0500_22O06]
          Length = 356

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 164/346 (47%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVD--AYIKLTE-EYAAISPIISKISIYDQKKQEEQDLHT 64
            +   + R   ++  M +    D     K T  E   +   +   S  D +  E      
Sbjct: 11  DLESRQERLRVLDQEMVQPGFWDSPDQAKATIDESNRLKGWVDPWSSLDARVSELT---- 66

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
                  + E     + E       + +    +    + +  DD +  ++ I  G GG E
Sbjct: 67  -ALVELLEEEEDADLEAEFTRGLASVEKDLEVLEVRTMLQGGDDHRDALVTIHPGAGGLE 125

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  + G L RMY R++  R + VEVL     ++GG K     I G   +  +K E GVHR
Sbjct: 126 SQDWAGMLMRMYTRWSERRGFGVEVLDLQSAEEGGIKSATLEIKGECAYGYLKAEGGVHR 185

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +   R HTS A+V + P     I++DI   D+RIDT RASG+GGQHVN TDSA
Sbjct: 186 LVRISPFDQQSRRHTSFASVFIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTDSA 245

Query: 244 VRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSG 300
           VRITH PTGI+     E+SQH+NR  AMK+LRA LY    +    ER+     K +IG G
Sbjct: 246 VRITHEPTGIVTTCQQERSQHKNRSTAMKMLRAALYQHALQEQERERAVLEATKTEIGFG 305

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +   +IR+Y F     + DHR  L +  ++ V+ G +D  I   L 
Sbjct: 306 N---QIRSYVFQPYTMVNDHRTELKITNVQGVMDGDLDPFIEAYLK 348


>gi|257785087|ref|YP_003180304.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
 gi|257473594|gb|ACV51713.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
          Length = 369

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 163/344 (47%), Gaps = 11/344 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + + + + +E+E   +     D      +    ++ +   ++  D+ K++  D       
Sbjct: 25  LAEKRQQISELEAESARPNFWDDAEAAQKIMTQLASLRDDVAGIDRAKEKLGDAEAAFEL 84

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                +     +   LA+  E    E          D  D    I+ I+ G GG E+  +
Sbjct: 85  GTELGDQASFDESRALAVSLEKDLSEL--ELSSWFTDELDHGDAIVTIKPGQGGLESQDW 142

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              LF MY +Y   R WKV++  +   +  G      T+SG+  +  ++ E GVHR+ R+
Sbjct: 143 CEMLFHMYLKYCDRRGWKVDINDAPAAEVIGLDRATFTVSGKNAYGMLRAEQGVHRLVRI 202

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
             T+   R  TS A V VLP    +I+VDI   D+RID   ASG GGQ VNTTDSAVRIT
Sbjct: 203 SPTDDKKRRQTSFAGVEVLPVLPEDIEVDIDPNDLRIDVYHASGPGGQGVNTTDSAVRIT 262

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           HIPTG +V   +E+SQ QN+  AM +LR+RLY++E+++   E    R  K +I  G+   
Sbjct: 263 HIPTGTVVTCQNERSQLQNKAAAMNILRSRLYEIEKEKREAELDELRGPKREISFGN--- 319

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVL-QGYIDDIINPLLTA 346
           +IR+Y     + I D R       +E V   G +D  I      
Sbjct: 320 QIRSYVLYPYQLIKDLRTGAETGNVESVFSDGDLDQFIIAYHRW 363


>gi|221195492|ref|ZP_03568547.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
 gi|221184679|gb|EEE17071.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
          Length = 371

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 171/349 (48%), Gaps = 11/349 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I + +   A +    +++   +      +  A ++ +   ++  D    + +D    +  
Sbjct: 25  IDEKREEIASLTQISAKADFWNDADFARQTMARLASLKDDVAGIDAAHAKLEDAKAALEL 84

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            +   +   LA+ E LA        E          D  D    I+ ++ G GG EA  +
Sbjct: 85  GSETEDAGLLAESEHLADSLARDLSEL--ELSSWFTDELDHGDAIVTVKPGQGGLEAQDW 142

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              LF MY RYAA R W V++  ++  +  G      T+SG+  +  ++ E GVHR+ R+
Sbjct: 143 ADMLFHMYLRYAARRGWSVDIAEATPAEVIGIDRATFTVSGKNAYGMLRAEQGVHRLVRI 202

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
             T+   R  TS A V VLP   AEI+VDI   D+RID   ASG GGQ VNTTDSAVRIT
Sbjct: 203 SPTDDKKRRQTSFAGVEVLPVLPAEIEVDIDPSDLRIDVYHASGPGGQGVNTTDSAVRIT 262

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSE 304
           HIPTG++V   +E+SQ QN+  AM +LR+RLY++ER++   E    R  K +I  G+   
Sbjct: 263 HIPTGVVVTCQNERSQLQNKAAAMNILRSRLYEIEREKREAELDELRGPKHEISFGN--- 319

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKM 351
           +IR+Y     + + D R       ++ VL  G +D  I        ++ 
Sbjct: 320 QIRSYVLYPYQLVKDLRTGEETGNVDAVLDDGDLDPFIIAYHRWRTSQK 368


>gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304]
 gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304]
          Length = 370

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 169/352 (48%), Gaps = 15/352 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IG 67
            +L  +   +E   S     D         + +S   ++    D  ++   D+ T+  +G
Sbjct: 27  QNLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQNEAKRLDDLERRLDDIATLYELG 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D + +  A+ E+ A+  ++ +LE +           D+++ ++ IR+G GG +AA 
Sbjct: 87  SEEDDQDSKAEAEKELTAVRSDLSDLEIQTL----LDGEYDNRAAVVTIRSGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +KV+++ +S  ++ G K     +     + ++  E G HR+ R
Sbjct: 143 WAQMLMRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFEVDAPYAYGKLSVEGGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   + + R  TS A V V+P       +DIP  DIR+DT  + G GGQ VNTT SAVRI
Sbjct: 203 ISPFDNNSRRQTSFAAVEVIPLVEPTDHIDIPDSDIRVDTYMSHGPGGQGVNTTYSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRS 303
           THIPTGI+V    E+SQ QNR  AM VL++RL  ++++    E +A +K   G       
Sbjct: 263 THIPTGIVVTMQDERSQIQNRAAAMSVLQSRLLVMKQE----EEAAKKKELAGDVKASWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +++R+Y     + + D R        + V  G ID  I+  +     +    
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAGIRWRHRERAKE 370


>gi|310659612|ref|YP_003937333.1| prfb [Clostridium sticklandii DSM 519]
 gi|308826390|emb|CBH22428.1| PrfB [Clostridium sticklandii]
          Length = 328

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 108/331 (32%), Positives = 172/331 (51%), Gaps = 12/331 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MSE    +   K  +       I  K+  +   + E +D   +    + D+ +       
Sbjct: 1   MSEPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELADEDASLEKELHSA 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           + ++E++I EL        L     D  + I+ I AG+GG +A  +   L RMY+R+A  
Sbjct: 61  LNSLEEKIDEL----KIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQS 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             ++V  L    + + G K +   I G   +  +K E GVHR+ R+   + SG+ HTS A
Sbjct: 117 MGFRVIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFA 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    I++DI   D++IDT RASG+GGQHVN T+SA+RITH+PTGI+V   +++
Sbjct: 177 SVDVIPELDDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG-RIT 317
           SQH N+  AMK+L A+L +++     ++    +    QI  G    +IR+Y F     + 
Sbjct: 237 SQHSNKETAMKMLMAKLIELKELEHKDKIEDLQGEYSQISWG---SQIRSYVFQPYTMVK 293

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           DHR N  +  ++ V+ G I   IN  L  +Q
Sbjct: 294 DHRTNTEIGHVQSVMDGNIMPFINAYLKENQ 324


>gi|163840102|ref|YP_001624507.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
           33209]
 gi|229470354|sp|A9WPT6|RF2_RENSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|162953578|gb|ABY23093.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
           33209]
          Length = 374

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 7/348 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+   A +  +       D   +  +  + +S   SK+   +       DL  ++   
Sbjct: 30  DSLRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETLTARIDDLEVLVELA 89

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S+ +   LA+     +  +    E     + L     D++  ++ IR+G GG +AA F 
Sbjct: 90  ESEHDEDSLAEASKELVSLQKSLQEL--EVVTLLAGEYDEREAVVTIRSGAGGVDAADFA 147

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +   VL +S  ++ G K     +     F  +  E+G HR+ R+ 
Sbjct: 148 EMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRIS 207

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V V+P       ++IP  DIR+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 208 PFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNDIRVDVFRSSGPGGQSVNTTDSAVRLTH 267

Query: 249 IPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG +V+  +EKSQ QNR  A +VL++RL  +++++   E+ A       S    +++R
Sbjct: 268 LPTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKKQQEDAEKKALAGDVKAS--WGDQMR 325

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +Y  +  + + D R    +     VL G IDD I+  +         +
Sbjct: 326 SYVLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGIRWRANNRNAA 373


>gi|56551094|ref|YP_161933.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761334|ref|ZP_04759422.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753249|ref|YP_003226142.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|56542668|gb|AAV88822.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374241|gb|EER63738.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258552612|gb|ACV75558.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 375

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 110/339 (32%), Positives = 167/339 (49%), Gaps = 10/339 (2%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            R  E+  R+ +    D      E       +   I+       E Q+   +I    ++ 
Sbjct: 30  RRLDELNARVEDPSLWDDARAAQEVMRERGRLDESIAATRAIATELQENIELIEMAEAEG 89

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           E   +            R   +      L     D     +E+ AG GG+E+  +   L 
Sbjct: 90  EEEMVQDAISALESLAERA--DRDKVKALLSGEADGNDTYIEVNAGAGGTESQDWAEMLS 147

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY+R+A  + +KVE++     +  G K     + G   +   K E+GVHR+ R+   ++
Sbjct: 148 RMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGESAYGYAKTENGVHRLVRISPFDS 207

Query: 194 SGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           + R HTS A+VAV P    +ID+++  +D++IDT R+SG+GGQHVNTTDSAVRITH+PTG
Sbjct: 208 NARRHTSFASVAVYPVVDDDIDIEVLDKDLKIDTYRSSGAGGQHVNTTDSAVRITHMPTG 267

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTY 309
           I+V   +++SQH+NR  AMK L+ARLY+ E +    E SA    K +IG G    +IR+Y
Sbjct: 268 IVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAEASAGYAAKSEIGWG---HQIRSY 324

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
                + + D R  +T      VL G +D  I   L   
Sbjct: 325 VLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALAQR 363


>gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
 gi|300909208|ref|ZP_07126669.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
 gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
 gi|300893073|gb|EFK86432.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
          Length = 332

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 16/337 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGDHNSDSEIRDLA 79
           M++    +   +  +  A  + +  K   +   + +  DL     ++     D   +D  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAVEPDDDLQKDFE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  +   +          L     D K+ ILEI  G GG+EA  +   L RMY R+
Sbjct: 61  ASFTNTQKALEQ-----YRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYIRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                + VE  S    D+ G K +   I G   F  ++ E GVHR+ R+   +A+GR HT
Sbjct: 116 GEQHAFSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE    ++VDI   D+R+DT R+SG+GGQH+N T+SAVRITHIPTGI+  + 
Sbjct: 176 SFASVDVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR+ AM +L+++LY++E ++ A +R+     Q  IG G    +IR+Y F    
Sbjct: 236 AERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWG---SQIRSYVFHPYT 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + D+R     +  + V+ G +D  I+  L    ++ 
Sbjct: 293 LVKDNRTGYETHNGQAVMDGDLDPFIDAFLQWKLSQK 329


>gi|160878415|ref|YP_001557383.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg]
 gi|160427081|gb|ABX40644.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg]
          Length = 333

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 108/330 (32%), Positives = 172/330 (52%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    D+  K     +E   +  I+S+ +   Q+  +   L  +  +      I ++ 
Sbjct: 1   MEEPNFWDSQEKSQAYMKELKNLKDIVSEYNGLKQQYDDILTLLEMGYEEEDPDLIPEIE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q     I+         +    L  D  D  + IL + AG GG+E+  +   L+RMY+R+
Sbjct: 61  QELEQFIDALEE-----LRLNTLLSDEYDKDNAILTLHAGAGGTESCDWASMLYRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +  E+L   D ++ GYK +   I+G   +  +K E GVHR+ R+    A+G+  T
Sbjct: 116 ADKKGYTTELLDFLDGEEAGYKSVTLQINGLNAYGHLKSERGVHRLVRISPFNAAGKRQT 175

Query: 200 SAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+P    +ID++I  +D+RIDT R+SG+GGQHVN T SA+RITHIPTG +V   
Sbjct: 176 SFVSCDVMPDIEEDIDIEINDDDLRIDTYRSSGAGGQHVNKTSSAIRITHIPTGTVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QN+ +AM++L+A+LY  +++  A + S  R  +I   +   +IR+Y       +
Sbjct: 236 NERSQFQNKDKAMQMLKAKLYLKKKEENAAKESGIR-GEIRDINFGNQIRSYVLQPYTMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR N  +     VL G ID  IN  L  
Sbjct: 295 KDHRTNTDVSNALGVLDGNIDPFINAYLKW 324


>gi|298706071|emb|CBJ29181.1| peptide chain release factor [Ectocarpus siliculosus]
          Length = 789

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 85/356 (23%), Positives = 157/356 (44%), Gaps = 11/356 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L+     +E   SE+   +      +    ++ +  ++    + +  E D  TVI   
Sbjct: 111 AKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWRGWEADAETVIELC 170

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENE---INYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
             +    +     +    + ++ L+ +        L     D+  C L I AG GG+EA 
Sbjct: 171 GEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCRLTIMAGAGGTEAQ 230

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+   R +K +++     +  G K     + G   +  +  E G HR+ 
Sbjct: 231 DWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLV 290

Query: 187 RVPATEASGRVHTSAATVA---VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           R     A  +  TS A V    ++ +    D+ +P  ++ + TMR+ GSGGQ+VN  ++ 
Sbjct: 291 RQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSGGSGGQNVNKVETG 350

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ HIPTGI V  + E+SQ  N+  A+ +L+ +L  V +++   + +  R   +     
Sbjct: 351 VRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDLAEIRGDMVE-ASW 409

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            ++IR Y F   + + D R      +++ V+ G +D +I   L    A+ +  A E
Sbjct: 410 GQQIRNYVFHPYKLVKDTRTGAETVQVQDVMDGDLDALIEAYLRH--ARGLVGAEE 463


>gi|224101237|ref|XP_002312196.1| predicted protein [Populus trichocarpa]
 gi|222852016|gb|EEE89563.1| predicted protein [Populus trichocarpa]
          Length = 379

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 97/349 (27%), Positives = 169/349 (48%), Gaps = 5/349 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           L+   A++E + ++S   D   K  E   A++ +  KI +  + K + ++  T++     
Sbjct: 30  LEQELADLESKAADSSLWDDRAKAQETLLALTDVKDKIKLLAEFKTKVEEAETIVKLTEE 89

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
                     E   I KE+ +  ++     L     D +  +L I AG GG++A  +   
Sbjct: 90  MDSTDAGFLEEATGIIKELNKALDKYELTQLLSGPYDKEGAVLSITAGAGGTDAQDWADM 149

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+   +++K +V+ SS  ++ G K     + GR  +  +  E G HR+ R    
Sbjct: 150 LLRMYVRWGEKQRYKTKVVESSPGEEAGIKSATVEVEGRYAYGYLSGEKGTHRIVRQSPF 209

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDI--PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            + G   TS + V V+P   E  +D+  P ED+ I T RA G GGQ+VN  ++AVRITHI
Sbjct: 210 NSKGLRQTSFSGVEVMPLLPEESMDVELPEEDLEISTSRAGGKGGQNVNKVETAVRITHI 269

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PTG+ V  + E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++IR 
Sbjct: 270 PTGVTVRCTEERSQLSNKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQIRN 328

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           Y F   + + D R       +  V+ G +D  I   L    +  + ++ 
Sbjct: 329 YVFHPYKLVKDVRTGHETSDIASVMDGELDPFIRAYLKHKYSMTLSASE 377


>gi|84393962|ref|ZP_00992702.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
 gi|84375406|gb|EAP92313.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
          Length = 303

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 102/307 (33%), Positives = 163/307 (53%), Gaps = 12/307 (3%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
             ++  I   DQ  ++ + L  +  +        ++          E+     ++ +  +
Sbjct: 2   EAVVETIDQLDQGVEDVEGLLELAVEEEDQETFDEIEPE-----LAELEAKLEKLEFRRM 56

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D   C +++++G+GG+EA  +   + RMY R+A  + +K EV+  SD D  G K 
Sbjct: 57  FAGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKG 116

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLED 221
               ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  + PE  +   +DI   D
Sbjct: 117 ATVRISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSD 176

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L+++
Sbjct: 177 LRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFEL 236

Query: 281 ERKRMANER--SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDD 338
           E ++   E+  S   K  IG G    +IR+Y     RI D R  +     + VL G +D 
Sbjct: 237 EIQKQNAEKQASEETKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDK 293

Query: 339 IINPLLT 345
            I   L 
Sbjct: 294 FIEASLK 300


>gi|302762182|ref|XP_002964513.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
 gi|300168242|gb|EFJ34846.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
          Length = 366

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 93/347 (26%), Positives = 167/347 (48%), Gaps = 5/347 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L    +   +   A++E + S+    +   K  +  + ++ I  ++++Y   + +  D 
Sbjct: 19  LLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTFRAKVDDA 78

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++             ++E       I    +      L   T D +   + I AG GG
Sbjct: 79  QCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARITITAGAGG 138

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           ++A  +   L RMY+R+A    +K  V+ SS  ++ G K     I GR  +  +  E G 
Sbjct: 139 TDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGYISGEKGT 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           HR+ R     + G   TS A V V+P  E +EI+V+IP  D+ I T R+ G GGQ+VN  
Sbjct: 199 HRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKGGQNVNKV 258

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++AVR+THIPTGI +  S E+SQ QN+++A+ +L+++L  +  ++ A E    R   +  
Sbjct: 259 ETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVILEEQRAAEIKEIR-GDVVK 317

Query: 300 GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +  ++IR Y F   + + D R N+    +  ++ G ++ ++   L 
Sbjct: 318 AEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLM 364


>gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311]
 gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift
           [Synechococcus sp. CC9311]
          Length = 375

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 88/342 (25%), Positives = 163/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  +  ++E   ++    +      ++   +  + +++      +    D    + 
Sbjct: 26  DVPALNAKQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVDWRGAIDDGQATLE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            H  + +  +    E      ++R+  +      L     D +  +L I AG GG++A  
Sbjct: 86  LHELEPD--EDLLGEAQQGLNQLRQALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  +   V V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 144 WAQMLLRMYTRWAEDQGMSVSVNELSEGEEAGIKSTTIEIEGRYAYGYLRNEKGTHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A V V+P+   E+++DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 204 ISPFNANDKRQTSFAGVEVMPKLDEEVELDIPEKDLEVTTSRSGGAGGQNVNKVETAVRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTG+ V  + E+SQ QN+ +AM +L+A+L  + +++ A E +  R   I       +
Sbjct: 264 LHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R       ++ V+ G ++  I  LL  
Sbjct: 323 IRNYVFHPYQMVKDLRTQEETTDVQGVMDGDLNPFIQALLRQ 364


>gi|103488652|ref|YP_618213.1| peptide chain release factor 2 [Sphingopyxis alaskensis RB2256]
 gi|98978729|gb|ABF54880.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingopyxis
           alaskensis RB2256]
          Length = 375

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 165/341 (48%), Gaps = 16/341 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  ++ +    D          E   +   I+     +++  +  +L  +     
Sbjct: 30  RRLDELNAKVEDPTLWDNPKAAQDVMRERRRLDEAITATRAIERECADTAELIELAEMEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
                 +    E +A    +     E     L     D     +E+ AG GG+E+  +  
Sbjct: 90  D-----EAMVDEAVASLAALAARAEEDKVKALLAGEADGNDAYIEVHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R  KVE++     +  G K     + G   +   K ESGVHR+ R+  
Sbjct: 145 MLQRMYMRWAEKRGMKVELIEYQAGEQAGIKSATMLVKGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V P     I+++I   D++IDT RASG+GGQHVNTTDSAVRITHI
Sbjct: 205 YDSSARRHTSFSSVWVYPVIDDNIEIEINEGDLKIDTYRASGAGGQHVNTTDSAVRITHI 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTGI+V + +++SQH+NR  AM +L+ARLY+ E ++     S     K +IG G    +I
Sbjct: 265 PTGIVVASQNDRSQHKNRATAMGMLKARLYEAELQKREAAASGEYQAKTEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     + + D R  +T      VL G +D  +   L+ 
Sbjct: 322 RSYVLQPYQLVKDLRTGVTSTAPGDVLDGALDPFMAAALSQ 362


>gi|311107121|ref|YP_003979974.1| peptide chain release factor [Achromobacter xylosoxidans A8]
 gi|310761810|gb|ADP17259.1| peptide chain release factor 2 [Achromobacter xylosoxidans A8]
          Length = 300

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 105/305 (34%), Positives = 165/305 (54%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  ++       +  +L  +    + D+ +           +    +LE  + +  +  +
Sbjct: 2   VETLTALGSGLADSNELFELAASDDDDATLE----SIEQDADAFQEKLEA-LEFRRMFSN 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C L+I+AG GG+EA  +   L R Y +YA  + +K EVL  SD D  G K    
Sbjct: 57  PADPLNCFLDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESDGDVAGLKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
            I G   F  ++ E+GVHR+ R    ++SG  HTS A+V V PE     +V++   D+R+
Sbjct: 117 KIEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH+NR  AM++L+++LY++E +
Sbjct: 177 DTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
               E+    + K  +G G    +IR+Y   Q RI D R N+ +   + VL G +D  I 
Sbjct: 237 NRMAEQQKLEDSKTDVGWG---HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQ 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|51473471|ref|YP_067228.1| peptide chain release factor 2 [Rickettsia typhi str. Wilmington]
 gi|51459783|gb|AAU03746.1| peptide chain release factor 2 (RF-2) [Rickettsia typhi str.
           Wilmington]
          Length = 340

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 101/340 (29%), Positives = 176/340 (51%), Gaps = 14/340 (4%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSD 72
           R  E+E   ++    +            + I  K+++++  K   +D+  +  + +  +D
Sbjct: 2   RLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELEAMAEVEND 61

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E  +  + +   +     +LE       L  D  D  +C LEI AG GG+E+  +   +
Sbjct: 62  FETLNQIEQDFKKLSIIAAKLET----ECLFSDESDYNNCFLEINAGAGGTESHDWASIM 117

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A    +K ++++  + ++ G K     I G+  +   K E+GVHR+ R+    
Sbjct: 118 MRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFN 177

Query: 193 ASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           A+G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAVRITHIPT
Sbjct: 178 AAGKRMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPT 237

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRT 308
             +    S++SQH+N+ +AMK+L+A+LY +E ++  +  ++    K     G    +IR+
Sbjct: 238 NTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWG---HQIRS 294

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           Y     + + D R +      + VL G +++ ++  L  +
Sbjct: 295 YVLQPYQIVKDLRTDYETSDTKGVLDGNLENFVSASLAMN 334


>gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14]
 gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14]
          Length = 371

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 168/348 (48%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEALRGRIDDLAVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+ A+ K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAESELTAVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R +K EV  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V +LP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G     
Sbjct: 261 RLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R +  +   E V  G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRKQQ 366


>gi|257063623|ref|YP_003143295.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM
           20476]
 gi|256791276|gb|ACV21946.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM
           20476]
          Length = 369

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 103/348 (29%), Positives = 166/348 (47%), Gaps = 8/348 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I + ++   ++   ++     +      +     S + S +  Y+      +D  T    
Sbjct: 27  INENESLLEKLNEEIASPDFWNDSQNALQVSKRASEVRSILDEYEHVASLLEDARTADEL 86

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D    +        +   +  LE             D    I+ I  G GG EA  +
Sbjct: 87  SADDEMFAEERDELRRQLSDLLDGLEV----SSWFSGEMDPCDAIVSINPGQGGLEAQDW 142

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           V  L++MY +YA  + WKV +L  +  +  G    V  I G+  +  ++ E+GVHR+ R+
Sbjct: 143 VDMLYKMYSKYAEKKGWKVRLLDITPGEVIGLDRAVIQIEGKNAYGMLRSENGVHRLVRI 202

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
             T+   R  T+ A V VLP    EI+VD+ + D+R+D  R+SG GGQ VNTTDSAVR+T
Sbjct: 203 SPTDDKKRRQTTFAGVEVLPVVDDEIEVDLNVNDVRVDVYRSSGPGGQCVNTTDSAVRLT 262

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTGI+V   ++KSQ QN+  A KVLRA+LY++ER++   E  A R  ++       +I
Sbjct: 263 HIPTGIVVTCQNQKSQLQNKDAAFKVLRAKLYELERQKREEEIDALRGERM-DNSFGSQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           R Y     + + D R  +    ++ VL G I++ +        A+ + 
Sbjct: 322 RNYVLYPYQLVKDLRSGIETGNVDAVLSGDIEEFVIGYHRWRVAQRLA 369


>gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
 gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
          Length = 370

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 104/354 (29%), Positives = 172/354 (48%), Gaps = 15/354 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A++E +++     D   K     + +S   ++         +  DL  ++ 
Sbjct: 24  DLTALEATIADLEEQVAAPDLWDDQEKAQAVTSLLSRAKAEYDRVTGMDTKVDDLEALVE 83

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                +D+E    A+ E+  ++K + ELE       L     D++S ++ IRAG GG +A
Sbjct: 84  MGQEENDAETLLEAEKELKIVKKAVGELEV----RTLLSGEWDERSAVVTIRAGAGGVDA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +  +V+ +S  ++ G K     ++    F  +  E G HR+
Sbjct: 140 ADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEVNVPYAFGNLSVEGGTHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS   V V+P       ++IP  D++ID  R+SG GGQ VNTTDSAV
Sbjct: 200 VRISPFDNQGRRQTSFVAVEVIPLIEGTDSIEIPENDLKIDVFRSSGPGGQSVNTTDSAV 259

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GD 301
           R+THIPTG +V+  +EKSQ QNR  A++V+++RL  ++R     E +A +K   G     
Sbjct: 260 RMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKR----AEEAAVKKEMAGDVKAS 315

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             +++R+Y  +  + + D R          V  G ID  I   +    A+   +
Sbjct: 316 WGDQMRSYVLNPYQMVKDLRTEFETGNPTAVFDGDIDGFIEAGIRWQIAERKAA 369


>gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4]
 gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4]
          Length = 376

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 160/345 (46%), Gaps = 8/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ + AE+E + S     D   +  +  + +S   +++    + +Q   DL  +  
Sbjct: 33  DLEALRAQVAELEEQASSPTLWDNVEEAQKVTSQLSHRQAELRRVSELRQRLDDLGVLYE 92

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   + + E    +       + +    L     DD++ ++ IR+  GG +AA 
Sbjct: 93  LAADEGDSGSMTEAEGDLADLAKDI--DALEVRTLLSGEYDDRNAVVNIRSEAGGVDAAD 150

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +  +V   S  ++ G K     ++   V+  +  E G HR+ R
Sbjct: 151 FAEMLLRMYLRWAERHGYPTDVFDISYAEEAGIKSATFKVTAPYVYGTLSVEQGTHRLVR 210

Query: 188 VPATEASGRVHTSAAT-VAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A    +        VDIP +DIR+D  R+SG GGQ VNTTDSAVR+
Sbjct: 211 ISPFDNQSRRQTSFAHVEVLPEVEEVDHVDIPEKDIRVDVYRSSGPGGQSVNTTDSAVRL 270

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTGI+V   +EKSQ QN+  AMKVL+ARL   +++    E  A +    G      +
Sbjct: 271 THIPTGIVVSCQNEKSQLQNKAAAMKVLQARLLQRKKEEERAEMDALKD---GGSSWGNQ 327

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +R+Y     + + D R    +     VL G ID  +   +   + 
Sbjct: 328 MRSYVLHPYQMVKDLRTEFEVGNPTAVLDGDIDGFLEAGIRWRKQ 372


>gi|86147405|ref|ZP_01065718.1| peptide chain release factor 2 [Vibrio sp. MED222]
 gi|218708550|ref|YP_002416171.1| peptide chain release factor 2 [Vibrio splendidus LGP32]
 gi|85834833|gb|EAQ52978.1| peptide chain release factor 2 [Vibrio sp. MED222]
 gi|218321569|emb|CAV17521.1| Peptide chain release factor 2 [Vibrio splendidus LGP32]
          Length = 303

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 12/307 (3%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
             ++  I   DQ  ++   L  +  +        ++          E+     ++ +  +
Sbjct: 2   EAVVETIDQLDQGVEDVDGLLELAVEEEDQETFDEIEPE-----LAELEAKLEKLEFRRM 56

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D   C +++++G+GG+EA  +   + RMY R+A  + +K EV+  SD D  G K 
Sbjct: 57  FSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKG 116

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLED 221
               ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  + PE  +   +DI   D
Sbjct: 117 ATVRISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSD 176

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L+++
Sbjct: 177 LRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFEL 236

Query: 281 ERKRMANER--SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDD 338
           E ++   E+  S   K  IG G    +IR+Y     RI D R  +     + VL G +D 
Sbjct: 237 EIQKQNAEKQASEETKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDK 293

Query: 339 IINPLLT 345
            I   L 
Sbjct: 294 FIEASLK 300


>gi|311243768|ref|XP_003121185.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Sus scrofa]
          Length = 380

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 139/303 (45%), Positives = 205/303 (67%), Gaps = 5/303 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++   +  +K++E  +   ++ D + D  +R LA+ E+++ +KEI +L+++I  LL+P
Sbjct: 63  ELVAVAKLLTEKERELLETEHLLHDESED--LRKLAENEIISCQKEIAQLKHQIVLLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E+L    ++ GG +  
Sbjct: 121 SEEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +NR  AMK LRA+LY +  
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHL 300

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   ++R   RK+Q+G+  RSE+IRTYNF Q R+TDHRIN +LY L   +QG   +D+++
Sbjct: 301 EEETSKRYNARKVQVGTKGRSEKIRTYNFPQNRVTDHRINKSLYDLGTFMQGEYLLDELV 360

Query: 341 NPL 343
             L
Sbjct: 361 QSL 363


>gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
 gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
          Length = 322

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 13/318 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E   +   I +    +    +  +L  +       + + +       A +       
Sbjct: 1   MMRERTRLEEAIGRYRALEASLNDNLELIEMGEAEGDAAIVAEAEAALKAARDVAAE--- 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                  L     D     +EI AG GG+E+  +   L RMY R+A  + +KVE++   D
Sbjct: 58  --AEIETLLSGEADANDTYVEIHAGAGGTESQDWAQMLLRMYTRWAERKGYKVELMERHD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            ++ G K     + G   F  +K ESGVHR+ R+   +++ R HTS ++V V P    +I
Sbjct: 116 GEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDKI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D+++   D+RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V   +E+SQH+NR  A  +
Sbjct: 176 DIEVSEADVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQNERSQHKNRATAWDM 235

Query: 273 LRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           LRARLY+ E ++  +  +A    K  IG G    +IR+Y     + + D R  +     +
Sbjct: 236 LRARLYEAELQKREDAAAAQASGKTDIGWG---HQIRSYVLQPYQMVKDLRTGVETSDTD 292

Query: 330 YVLQGYIDDIINPLLTAH 347
            VL G +D  +   L A 
Sbjct: 293 GVLGGDLDPFMAAALAAR 310


>gi|332671116|ref|YP_004454124.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
 gi|332340154|gb|AEE46737.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
          Length = 382

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 170/351 (48%), Gaps = 15/351 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD-- 68
            LK + A +  + S     D      +  +A+S   +++    +      DL T++    
Sbjct: 40  ALKAKIALLSEQASVPNLWDDPDAAQKVTSALSATQAELDRVAKLGGRIDDLETLVELGV 99

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D +    A++E+  I K++ ELE       L     D +  ++ IR+G GG +AA F
Sbjct: 100 EMEDEDSLAEAEVELTGIRKDLGELEV----RTLLNGEYDQREAVVTIRSGAGGVDAADF 155

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    +   VL +S  ++ G K     +     F  +  E+G HR+ R+
Sbjct: 156 AEMLLRMYLRWAERHGYPTTVLDTSYAEEAGLKSATFEVKAPYAFGHLSVEAGTHRLVRI 215

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V V+P       ++IP  +I++D  R+SG GGQ VNTTDSAVR+T
Sbjct: 216 SPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMT 275

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRSE 304
           HIPTGI+V+  +EKSQ QNR  A++VL++RL  V       E  A +K   G       +
Sbjct: 276 HIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVR----KAEEDAKKKELAGDIKASWGD 331

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ++R+Y     + + D R    +     V  G IDD I   +   +++ + +
Sbjct: 332 QMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRRSQSVEA 382


>gi|313906145|ref|ZP_07839494.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
 gi|313469032|gb|EFR64385.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
          Length = 332

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 100/332 (30%), Positives = 175/332 (52%), Gaps = 6/332 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    +   +  ++   +  + +    Y +    ++D+  +I     + +  +    E
Sbjct: 1   MEEPDFWNNPDEAQKQTKELGDLKNDRDTYAKLVSTKEDIEMMIEMGEEEDD--ESIVPE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V  +  +  E  + +    L  +  D  + I+ + AG GG+EA  + G L+RMY R+A  
Sbjct: 59  VREMLDDFIETLDGVRIKTLLSEEYDVNNAIIRLNAGAGGTEAMDWCGMLYRMYTRWAER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +E L   + D+ G K ++  ++G   +  +K ESGVHR+ R+    A  +  TS  
Sbjct: 119 KGFAIEELDMQEGDEAGIKSVMFQVNGTNAYGLLKSESGVHRLVRISPFNAQAKRQTSFV 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE   +ID+++  EDIR+DT R+SG+GGQH+N T SA+RITH+PTGI+V   +E+
Sbjct: 179 SCDVMPELNDDIDIEVRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVTCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QN+ +AM+VL+A+LY +E+++ A + +  R  ++       +IR+Y       + D 
Sbjct: 239 SQFQNKDKAMQVLKAKLYMLEQEKQAEKAAGIR-GEVTDIAWGHQIRSYVLQPYTMVKDL 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R N    +   VL G +D  IN  L     + 
Sbjct: 298 RTNAEKAQASAVLDGDLDPFINAYLKWQALRK 329


>gi|225020766|ref|ZP_03709958.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946468|gb|EEG27677.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 368

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 164/345 (47%), Gaps = 9/345 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            DL +R  E+  + ++    D      +  + +S +  ++      +    DL  +    
Sbjct: 26  ADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSLRSRLTDLPIMYELA 85

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             + E  D+A  E+  +  +I  LE             D +  ++ IR+G GG +AA + 
Sbjct: 86  EEEGEGADIADEELADLRADIDALEVTTM----LSGEYDSREALINIRSGAGGVDAADWA 141

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  +  KVEV   S  ++ G K     + G  ++  +  E GVHR+ R+ 
Sbjct: 142 EMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLSVEQGVHRLVRIS 201

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +   R  TS A V VLP       +DIP  ++R+D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 202 PFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQSVNTTDSAVRLTH 261

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +EKSQ QN+  A++VL+A+L + +R+    E  A      G+     ++R
Sbjct: 262 IPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKRQEERAELDAL--GAGGNASWGNQMR 319

Query: 308 TYNFSQ-GRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            Y       + D R    +   + VL G +D  +   +   + + 
Sbjct: 320 NYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRKGQH 364


>gi|99080709|ref|YP_612863.1| peptide chain release factor 2 [Ruegeria sp. TM1040]
 gi|122984362|sp|Q1GIB5|RF2_SILST RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|99036989|gb|ABF63601.1| bacterial peptide chain release factor 2 (bRF-2) [Ruegeria sp.
           TM1040]
          Length = 374

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 160/339 (47%), Gaps = 6/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E   R+ +    D      +       ++  +  Y   +Q+ QD   +I     + +
Sbjct: 31  RLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYKSIRQDLQDSVELIELGEMEED 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
                  +     K ++E   +     L     D     LEI+AG GG+EA  +   L R
Sbjct: 91  AE--VVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLEIKAGAGGTEACDWASMLAR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  R + VE+       + G K     I G   +  +K ESG HR+ R+      
Sbjct: 149 MYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGWLKSESGTHRLVRISPFGK- 207

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           G   TS A V   P     I++++   DIRIDT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 208 GTRETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQHVNTTDSAVRITHEPTGI 267

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  R   E +A  + + G      +IR+Y    
Sbjct: 268 VVTSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEAK-GDAGWGNQIRSYVMQP 326

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R N      + VL G +D  +   L    A  
Sbjct: 327 YQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMKVAGK 365


>gi|24216466|ref|NP_713947.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
           56601]
 gi|59798086|sp|Q8EZT4|RF2_LEPIN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|24197768|gb|AAN50965.1| peptidyl-tRNA hydrolase involved in peptide chain release
           [Leptospira interrogans serovar Lai str. 56601]
          Length = 367

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 169/345 (48%), Gaps = 16/345 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +   K+R   +  +  +    +   +    +++   +   ++      Q   +  DL  +
Sbjct: 29  LEQDKDRLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFTIQQDILDFPDLVDL 88

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D   ++ + +L+       EK        +  L   K+ +D K   L I  G GG+E+
Sbjct: 89  TLDEKGENGVGELSSEYNRLQEKFEE-----LELLGALKNPEDLKPAFLNIHPGAGGTES 143

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY RY   + ++  ++     D  G K     + G   F  +K E+GVHR+
Sbjct: 144 QDWAEMLLRMYTRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFLKGENGVHRL 203

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ R HTS  +V V P    +ID+ I  +DIR+D  R+SG+GGQHVNTTDSAV
Sbjct: 204 VRISPFDANKRRHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAV 263

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD--VERKRMANERSANRKLQIGSGD 301
           RITH+P+GI+V   +E+SQ +NR  A K+L+ARLY+   E+ +   E+ +  K  I  G 
Sbjct: 264 RITHMPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSGEKKDIAWG- 322

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y F     + DHR +     +  V+ G I+  I   L 
Sbjct: 323 --SQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|87200328|ref|YP_497585.1| peptide chain release factor 2 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136009|gb|ABD26751.1| bacterial peptide chain release factor 2 (bRF-2) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 375

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 165/342 (48%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    D   K      E   +   I  ++   Q+  +  +   +     
Sbjct: 30  RRLDELNARVEDPKLWDDPKKAEEVMRERRRLEASIGTVNQIGQEMADAIEFVELGEMEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  I +         E+      +      L     D  +  LE+ AG GG+E+  +  
Sbjct: 90  DEDTINEGLATLAALAERA-----DNDKVQALLAGEADANNAFLEVHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A    +KVE++     +  G K     I G   +   K ESGVHR+ R+  
Sbjct: 145 MLQRMYTRWAERHGYKVELVDYHAGEAAGIKSATLLIKGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V PE  +  +V+I   D++IDT RASG+GGQHVNTTDSAVRITH+
Sbjct: 205 YDSSARRHTSFSSVWVYPEIDDNIEVEINPADLKIDTYRASGAGGQHVNTTDSAVRITHV 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTGI+V + +++SQH+NR  AM +L+AR+Y+ E  +     S     K +IG G    +I
Sbjct: 265 PTGIIVASQNDRSQHKNRATAMGMLKARIYEAELAKREAAASGEYAAKTEIGWG---HQI 321

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y      ++ D R  +       VL G +D  +   L+  
Sbjct: 322 RSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363


>gi|86143360|ref|ZP_01061762.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217]
 gi|85830265|gb|EAQ48725.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217]
          Length = 368

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 24/363 (6%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  QI DL  R   +                E +  +    +   +  +    +    
Sbjct: 1   MITSDQIKDLVQRLDALKMHLGIDQKRVEIQNEEEKTFDPNFWNDPKEAEQFMRMLREKK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           + +  Y+Q     +DL  ++  H       +    +   + + +  +E    +  +  D 
Sbjct: 61  NWVKDYEQAVTLTEDLEVLLEFHKEGDASEEEVDKQYDKVTRLVEAME----FKNMLSDE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            DD S +L+I AG GG+E+  +   L RMY  ++    +KV+ L+  + D  G K +   
Sbjct: 117 GDDLSAVLQITAGAGGTESCDWASMLMRMYLMWSEKNGFKVKELNYQEGDVAGIKTVTLE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++DI   DI  D
Sbjct: 177 IEGAYAFGWLKSENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIDINPADISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
             R+SG+GGQ+VN  ++   +TH PTGI++  S  +SQ +NR +AM++L+++LY++E K+
Sbjct: 237 FARSSGAGGQNVNKVETKAILTHHPTGIVIHNSETRSQLENREKAMQMLKSQLYEIELKK 296

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPL 343
               R      +  S +   +IR Y     + I D R        + VL G +D+ +   
Sbjct: 297 RQAARDEIE-AEKKSIEWGSQIRNYVLHPYKLIKDVRTGEETGNTDAVLDGDLDNFLKAY 355

Query: 344 LTA 346
           L  
Sbjct: 356 LMM 358


>gi|159898428|ref|YP_001544675.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891467|gb|ABX04547.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 337

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 99/335 (29%), Positives = 163/335 (48%), Gaps = 10/335 (2%)

Query: 18  EIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRD 77
           ++E + +E    D   +       ++ +  ++ ++D    +   L  ++     D++   
Sbjct: 3   DLEHQAAEPSLWDNPQQAQSILQRLARMQEELKMWDSLAVDLATLRDLLQLSADDADSLS 62

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
             + EV  + K + +LE      +L  +  D  +  + I++G GG E+  +   L RMY 
Sbjct: 63  QIEREVNGLTKSVDQLEL----SILLGEKYDSTNAFISIQSGAGGVESQDWAQMLLRMYS 118

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+   + ++  ++   D ++ G K     + G   +   K E+G+HR+ R+   +A+ R 
Sbjct: 119 RWGESQGFRTTIVDMMDGEEAGIKSATLELRGPYAYGYAKAEAGIHRLVRLSPFDANHRR 178

Query: 198 HTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---- 252
           HTS A V VLPE  +  +V I  ED+R+D  RA G GGQ VNTTDSAVR+ +        
Sbjct: 179 HTSFARVEVLPEVDDAAEVKINPEDLRVDVYRAGGHGGQGVNTTDSAVRLVYRGGTPDEI 238

Query: 253 IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFS 312
           I+   +E+SQ QN+  AM VLRARL + E  R   ER+   K +        +IR+Y   
Sbjct: 239 IVTCQNERSQLQNKETAMNVLRARLLERELARQVAERAKL-KGEHRDAAWGNQIRSYVLD 297

Query: 313 QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             R+ DHR N+     + VL G ID  I+  L   
Sbjct: 298 DRRVKDHRTNVETSNTQAVLDGEIDLFIDAFLRWR 332


>gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421]
 gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421]
          Length = 354

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 12/339 (3%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPII---SKISIYDQKKQEEQDLHTVIGDHNS 71
           R A +E + S     D      +    ++ +     +   +     + + +  ++ +   
Sbjct: 19  RIAALEQQASAPDFWDDQAAAQKALQNLNNLKQPLEQFGRWRNLLSDAEVVLELVQETGD 78

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           +S + +        + +      +      L     D++  IL I AG GG++A  +   
Sbjct: 79  ESLLPEAEGNIEALVGEL-----DRWELEQLLSGPYDERGAILSINAGAGGTDAQDWAEM 133

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A  + ++  +L  S+ ++ G K     I GR  +  +  E G HR+ R+   
Sbjct: 134 LLRMYTRWAERQGYQAHLLELSEGEEAGVKSATLEIDGRYAYGYLSAEKGTHRLVRISPF 193

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+ +  TS A V V+P     + VDI  +DI IDT R+ G GGQ+VN  ++ VR+TH P
Sbjct: 194 NANDKRQTSFAGVEVMPVLDDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGVRVTHKP 253

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI V  + E++Q QNR +AM++L+ARL  +E ++     S  R   +       +IR+Y
Sbjct: 254 TGISVRCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAV-DAAWGNQIRSY 312

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            F   + + D R       +  V+ G I+  I   L   
Sbjct: 313 VFHPYQMVKDLRTEEETSDVTGVMNGKIEPFIERYLRRQ 351


>gi|194337758|ref|YP_002019552.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194310235|gb|ACF44935.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 363

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 169/346 (48%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKK---QEEQDLHT 64
            + + K +  ++E    +    +      +    ++   S    Y++     +  QD   
Sbjct: 23  DVDERKEKIEDLEKISFDPAFWNDQKAANKVLKELNEHKSWTDAYEKIILKARSCQDEFD 82

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + + +S   +L  +        I    + I +  +    DD  + ++ I AG GG+E
Sbjct: 83  IAIELDDESFGEELTAL-----IASIEHDISAIEFKNMLSGKDDAGNAMITIHAGAGGTE 137

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L+RMY R+A  + +K+      + D  G K     I G   +  +K E+GVHR
Sbjct: 138 AQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIEGPYAYGYLKAENGVHR 197

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + RV   +++ R HTS A+V   PEA    ++D+  ED+ + T R+ G GGQ+VN  ++A
Sbjct: 198 LVRVSPFDSNARRHTSFASVFTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVETA 257

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSG 300
           VRI H+PTGI+V    E+SQ QNR RAMK+L A+LY  +R      +     +K +I  G
Sbjct: 258 VRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQRDEEDARKREIEGKKKKIEWG 317

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y     RI DHR N   + +E VL G +D+ +   L+ 
Sbjct: 318 ---SQIRSYVLDDRRIKDHRTNYERFDVETVLDGDLDEFMEKYLSE 360


>gi|312130867|ref|YP_003998207.1| bacterial peptide chain release factor 2 (brf-2) [Leadbetterella
           byssophila DSM 17132]
 gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella
           byssophila DSM 17132]
          Length = 358

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 12/343 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            + K +  ++E + ++    +           I  + +    Y++ +    DL T+   +
Sbjct: 23  DNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTEAYEEAEASISDLETLFEFY 82

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
                  +    E     + I ELE       +    +D  S I+EI +G GG+E+  + 
Sbjct: 83  QEGEVEEEEVDTEAKKTVQIIEELEL----KKMLSSEEDQFSAIIEINSGAGGTESQDWA 138

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY  +A    +KV  +  +D D  G K     I G   +  +K E+GVHR+ R+ 
Sbjct: 139 SMLYRMYLMWAQKHGYKVTQVDWTDGDGAGIKSASMQIDGPLAYGYLKSENGVHRLVRIS 198

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS A+V   P     I+V++   DI   T R+ G+GGQ+VN  ++ V++TH
Sbjct: 199 PFDSNARRHTSFASVYAYPLVDDTIEVEVKDADIEWQTSRSGGAGGQNVNKVETKVQLTH 258

Query: 249 IPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSER 305
            PTGI+ V   E+SQ  N+  AM +L++RLY +E ++    R+     K +I  G    +
Sbjct: 259 KPTGIVIVCQIERSQLANKEHAMNMLKSRLYQIELEKRNAARADIEASKKKIEWG---SQ 315

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR Y F   + + D R       ++ V+ G IDD I   L   
Sbjct: 316 IRNYVFHPYKLVKDARTGHETSDIQRVMDGEIDDFIKAYLMLD 358


>gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902]
 gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp.
           CC9902]
          Length = 356

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 86/342 (25%), Positives = 164/342 (47%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   ++    +      ++   +  + +++      +    D    + 
Sbjct: 7   DVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAKATLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  +++  +    E      E+R+  +      L     D +  +L I AG GG++A  
Sbjct: 67  LYELEAD--EEMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A     +V +   S+ ++ G K     + GR  +  ++ E G HR+ R
Sbjct: 125 WAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+ +  TS A + V+P+   ++D+DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTG+ V  + E+SQ QN+ +AM +L+A+L  + +++ A E +  R   I       +
Sbjct: 245 QHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIR-GDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R       ++ V+ G +D  I+  L  
Sbjct: 304 IRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLRQ 345


>gi|300932665|ref|ZP_07147921.1| peptide chain release factor 2 [Corynebacterium resistens DSM
           45100]
          Length = 378

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/352 (28%), Positives = 165/352 (46%), Gaps = 10/352 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L +   E+E R ++    D      +  + +S +  K+      +Q  +DL  +  
Sbjct: 24  DLEALADSARELEDRAADPSLWDDPDHAQKVTSELSRVQGKLRKVKSLRQRLEDLPVMYD 83

Query: 68  DHNS----DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                   D +  D A         E+R+    +    +     D +  ++ IR+G GG 
Sbjct: 84  MAEEAAAEDPDTADEAMEMADEERAELRKEIESLEVTTMLSGEYDQREAVVNIRSGAGGV 143

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA +   L RMY R+A     KV++   S  ++ G K     + G  ++  +  E G H
Sbjct: 144 DAADWAEMLMRMYTRWAEKSGHKVDIYDISYAEEAGIKSATFVVHGEYMYGTLSVEQGAH 203

Query: 184 RVQRVPATEASG-RVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           R+ R+    + G +  TS A V VLP       +DIP  ++R+D  R+SG GGQ VNTTD
Sbjct: 204 RLVRLSPFGSGGDKRQTSFAEVEVLPVVEQTDHIDIPDAEVRVDVYRSSGPGGQSVNTTD 263

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIPTGI+V   +EKSQ QN+  AM+VL+A+L + +R+    E  A      G+ 
Sbjct: 264 SAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL--GAGGNA 321

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
               ++R+Y     + + D R N  +     VL G +D  +   +    ++ 
Sbjct: 322 SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWRMSEQ 373


>gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
           40736]
 gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
           40736]
          Length = 368

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 167/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEALRGRIDDLAVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+ A+ K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAESELAAVRKALDEMEV----RTLLSGEYDSREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R +K E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G     
Sbjct: 261 RLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRKQQ 366


>gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680]
 gi|81717933|sp|Q82D82|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis
           MA-4680]
          Length = 368

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 167/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEALRGRIDDLSVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+ A++K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAESELTAVKKALDEMEV----RTLLSGEYDSREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R +K E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V +LP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEILPVVETTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+  AM VL+A+L D  R+    +  A +    G     
Sbjct: 261 RLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G I+  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRKQQ 366


>gi|149927857|ref|ZP_01916108.1| peptide chain release factor 2 [Limnobacter sp. MED105]
 gi|149823479|gb|EDM82710.1| peptide chain release factor 2 [Limnobacter sp. MED105]
          Length = 304

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 104/309 (33%), Positives = 166/309 (53%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +  ++  ++       + ++L  +  +   D +  +  + EV   EK I +LE    +  
Sbjct: 2   LDGVVVTMNTVQSNISDSKELVEMA-EAEGDFDTLEAIESEVAEYEKVIADLE----FRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I AG GG+EA  +   L R Y RY   + +KVEV+  SD +  G K
Sbjct: 57  MFSNPADPANCFIDITAGAGGTEAQDWASILLRQYLRYCERKGFKVEVMEQSDGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                + G   F  ++ E+GVHR+ R    ++SG  HTS A++ V PE     +++I   
Sbjct: 117 SATIKVEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSFEIEINPA 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R DT RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH+NR  A  +L+A+LY+
Sbjct: 177 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWGMLKAKLYE 236

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y     RI D R  + +   + VL G +D
Sbjct: 237 FEMRKRMAEQQALEDTKTDVGWG---HQIRSYVLDNSRIKDLRTGVEISNTQRVLDGDLD 293

Query: 338 DIINPLLTA 346
             I   L  
Sbjct: 294 PFIEASLKQ 302


>gi|86133579|ref|ZP_01052161.1| peptide chain release factor 2 [Polaribacter sp. MED152]
 gi|85820442|gb|EAQ41589.1| peptide chain release factor 2 [Polaribacter sp. MED152]
          Length = 367

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 87/362 (24%), Positives = 166/362 (45%), Gaps = 24/362 (6%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+  R  ++                E + +     +           +    
Sbjct: 1   MITQDQLKDISTRIDKLKSYLEIDKKLIEIANEEEKTANPDFWNDPKAAELVMKELRFKK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  Y+   +  +DL      +  D         +       + ++E    +  +  D 
Sbjct: 61  KWVEDYNTIIRLNEDLIVFYEFYKEDEADEKDVVQQYEKTIALLEDIE----FKNMLSDE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D  S +++I AG GG+E+  +   LFRMY  ++  + +K++ L+    D  G K +   
Sbjct: 117 GDSLSAVIQITAGAGGTESCDWAEMLFRMYTMWSEKQGFKLKTLNYQAGDAAGIKTVTVE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           + G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++DI   DI I 
Sbjct: 177 VEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPVADDSIEIDINPADIEIT 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+SG+GGQ+VN  ++ V++TH P+GI +  S+ +SQH NR  AM++L+++LY++E ++
Sbjct: 237 TARSSGAGGQNVNKVETKVQLTHKPSGIQISCSNSRSQHDNRATAMQMLKSQLYEIELQK 296

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPL 343
               R      ++ + +   +IR Y     + + D R       ++ V+ G I+  +   
Sbjct: 297 QQAARDDIEANKMKN-EWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMDGNINAFLKAY 355

Query: 344 LT 345
           L 
Sbjct: 356 LM 357


>gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
           M045]
 gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
           M045]
          Length = 368

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEALRGRIDDLGVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+ A+ K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAESELTAVRKALDEMEV----RTLLSGEYDSREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R +K EV  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V +LP       V+I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPYDNQGRRQTSFAGVEILPVVEQTDHVEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G     
Sbjct: 261 RLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R +  +   E V  G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRKQQ 366


>gi|307294100|ref|ZP_07573944.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
 gi|306880251|gb|EFN11468.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
          Length = 375

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 166/341 (48%), Gaps = 16/341 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    D      ++  E   +   I      D +K +  +L  +     
Sbjct: 30  RRLDELNARVEDPTLWDNQKLAQEVMRERTRLEAAIGATRAIDSEKTDTAELIEMADAEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  + +         ++             L     D     LEI AG GG+E+  +  
Sbjct: 90  DEDMVTEAIASLKALADRADE-----DKIKALLAGEADASDTYLEIHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R +KVE++     D  G K       G   +   K ESGVHR+ R+  
Sbjct: 145 MLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V P     I++++   D++IDT RASG+GGQHVNTTDSAVRITH+
Sbjct: 205 YDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQHVNTTDSAVRITHV 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           P+GI+V + +++SQH+NR  AM +L+ARLY+ E +R     S     K +IG G    +I
Sbjct: 265 PSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQAKTEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     + + D R  +T    + VL G +D  +   L+ 
Sbjct: 322 RSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQ 362


>gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
 gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
          Length = 368

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 168/348 (48%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDKLRADIAVLEEQAAAPSLWDNPEEAQKITSKLSHLQAEVRKAEGLRGRIDDLAVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+  ++K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAESELTLVKKALDEMEV----RTLLSGEYDSREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K E++ +S  ++ G K    ++     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFSVQAPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V +LP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G     
Sbjct: 261 RLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRKQQ 366


>gi|15807620|ref|NP_293897.1| peptide chain release factor 2 [Deinococcus radiodurans R1]
          Length = 421

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 10/350 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     R  E++  +S+    +   +  +       +   +  Y     + Q L  ++ 
Sbjct: 73  DIPGKTRRLNELDRELSDPDLWNDQSRARQVTQEAGSVRKIVEEYAGLTSDAQGLSEMLD 132

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + +       +   L    +    E       L      D + I+ ++ G GG+EA  
Sbjct: 133 LADEEERELLEDEQAGLQKRVDDLYRE------TLFTMKHADTAAIVRVKGGAGGTEAQD 186

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           + G L RMY R+A  R +KV++L     D  GY+ I   I G   F  M  E GVHR+ R
Sbjct: 187 WAGMLARMYMRWAERRGYKVDILDEVAGDQAGYQSIEFIIRGEKAFGMMAPEHGVHRLVR 246

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLED--IRIDTMRASGSGGQHVNTTDSAVR 245
           V   +++ R  TS A+V V+PE  E +++I + D  +R D  R+ G+GGQ VNTTDSAVR
Sbjct: 247 VSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSAVR 306

Query: 246 ITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +TH+PTGI +     +SQ +N   A+++L+ RLYD+E K+   E  A R  Q    +   
Sbjct: 307 LTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMKKREAEELAARGQQ-AKVEWGS 365

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ++R+Y   +  I DHR  L ++  + VL G +D+++   L     K +  
Sbjct: 366 QMRSYVLDKQYIKDHRTGLMMHNPDDVLDGDLDELMWAGLEWMAGKRVAE 415


>gi|310778152|ref|YP_003966485.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
           polytropus DSM 2926]
 gi|309747475|gb|ADO82137.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
           polytropus DSM 2926]
          Length = 365

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 174/347 (50%), Gaps = 17/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   +N+  E+E    +    +      KL +E  A+  II +    ++   E   L  
Sbjct: 25  DLEGKENKVKELEKETLKDGFWNDKRESEKLIKEMNALKEIIGEYRSIEKLSDEVSVLLE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     +          +    + + ++    +  LL     D  + I+ I +G GG+E
Sbjct: 85  FVEMGEDEFLEE------LETKHRGLDKVIGAFDVKLLLDGEFDANNAIVTIHSGAGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L+RMY R+   R +K+  L     +  G K I   + G   +  +K E G+HR
Sbjct: 139 ACDWADMLYRMYSRWCNNRGYKITELDFMPGEMVGIKSITILVEGMRAYGYLKNEKGIHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+ + HTS A+V V+PE     D++I   D++IDT RASG+GGQHVNTTDSA
Sbjct: 199 LVRISPFDANKKRHTSFASVDVMPEVDETTDIEINTGDLKIDTYRASGAGGQHVNTTDSA 258

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSG 300
           VRITH+P+G++V    E+SQ QNR  AMK+LR++L ++E K+   E       +  IG G
Sbjct: 259 VRITHLPSGVVVTCQRERSQLQNRETAMKLLRSKLLELEMKKREEELKKIQGEQSDIGWG 318

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y F     + DHR  +    ++ V+ G IDD IN  L  
Sbjct: 319 ---SQIRSYVFQPYTLVKDHRTLVESGNIKAVMDGDIDDFINGHLRW 362


>gi|67920292|ref|ZP_00513812.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
 gi|67857776|gb|EAM53015.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
          Length = 358

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 162/348 (46%), Gaps = 7/348 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK    ++E   ++    D           ++ + S++  Y Q   +  D   +  
Sbjct: 13  DLPALKAVIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTKAIAE 72

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +     + E      ++    +      L     D K  +L I AG GG++A  
Sbjct: 73  LLELEDD--ATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQD 130

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + +KV +   S+ D+ G K     I GR  F  +K E G HR+ R
Sbjct: 131 WAQMLLRMYTRWGEQQGYKVHLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVR 190

Query: 188 VPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +    A+G+  TS A + ++P  E  ++ VDIP +D+ I T R+ G GGQ+VN  ++AVR
Sbjct: 191 ISPFNANGKRQTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVR 250

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + H+PTGI V  + E+SQ QN+ +A+ +L+A+L  +  ++ A E +  R   I       
Sbjct: 251 VVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEIR-GDIVEAAWGT 309

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +IR Y F   + + D R N+    +  V+ G +D+ I   L    A  
Sbjct: 310 QIRNYVFHPYQMVKDLRTNIETTDVNGVMDGSLDEFIEAYLRFDTAPK 357


>gi|291517989|emb|CBK73210.1| bacterial peptide chain release factor 2 (bRF-2) [Butyrivibrio
           fibrisolvens 16/4]
          Length = 338

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 102/332 (30%), Positives = 166/332 (50%), Gaps = 16/332 (4%)

Query: 23  MSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M                +E  ++   ++ I   +   +E +D   +  +   D EI D  
Sbjct: 1   MEAPDFWTDAQVSTAKMKELKSMKDDVAVIDKLEDLYKEIEDYIELGNEEE-DQEIVDTV 59

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
            + +   E ++  L        L     D  S I+ + +G GG EA  +V  L+RMY R+
Sbjct: 60  ALLIEEFENDLESL----RMKTLLSGEYDSDSAIVTLHSGAGGVEACDWVQMLYRMYSRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A+   + V+ L   + D+ G K +   ++G   +  +K E G+HR+ R+    A G+  T
Sbjct: 116 ASDMGFAVDELDYQEGDEAGIKSVTFQVNGDNAYGYLKSEKGIHRLVRISPFNAQGKRQT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+  V+P+  E  DV+I  EDIRIDT R+SG+GGQH+N T SA+RITH PTGI+V   
Sbjct: 176 SFASCDVMPDIEEDVDVEIRDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG- 314
           +E+SQ QN+ +AM++L+ +L  ++++  A + S  R    +IG G+   +IR+Y      
Sbjct: 236 NERSQFQNKDKAMQMLKTKLLLLKQEENAAKASGIRGEVSEIGWGN---QIRSYVLQPYT 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + D R        + VL G +   +N  L  
Sbjct: 293 MVKDLRTGEESGNADAVLDGKLTPFMNAYLKW 324


>gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 337

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 172/339 (50%), Gaps = 11/339 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +K R  E++ + S         K  E     S I  +I  + + + +  D  +++     
Sbjct: 1   MKLRLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAID 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           +++  +    EV     ++ +L        L     D+ +C LEI +G GG+E+  +   
Sbjct: 61  END--EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEM 118

Query: 132 LFRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           L RMY R+A     +KVEV+   D D  G K     I G   +   K ESGVHR+ R+  
Sbjct: 119 LMRMYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISP 178

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +A+G+ HTS A+V V P   +    +   +D++IDT RASG+GGQHVN T+SAVRITHI
Sbjct: 179 FDANGKRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHI 238

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTG++    + +SQH+N+  A+K+L+ RLY +E ++   + +    +K  IG G    +I
Sbjct: 239 PTGVVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWG---SQI 295

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+Y     + + D R    +  +  V  G ID  I  +L
Sbjct: 296 RSYVMHPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 334


>gi|206601601|gb|EDZ38084.1| Peptide chain release factor 2 [Leptospirillum sp. Group II '5-way
           CG']
          Length = 370

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 117/348 (33%), Positives = 170/348 (48%), Gaps = 21/348 (6%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             LK    +I+ +          D   K+  E + +   +S I   D++  + + L  + 
Sbjct: 17  DRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQGIDREDADIRALFELA 76

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               SD +        V    + ++  E       +  +   D    LEI  G GG+E+ 
Sbjct: 77  ----SDPDFLAELSRRVPEFSESVKAFEL----EEILSEAKSDNPAFLEIHPGAGGTESQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A      VEV+     ++ G K     + G   F  +  ESG+HR+ 
Sbjct: 129 DWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGYLMSESGIHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ R HTS  +V V PE   ++ V+I  EDIRIDT RAS +GGQHVN T SA+R
Sbjct: 189 RISPFDANKRRHTSFTSVFVYPELEDDVPVEIRDEDIRIDTFRASSAGGQHVNKTSSAIR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER----SANRKLQIGSG 300
           +TH+PTGI++ + +E+SQ QNR  A KVLRA+LY++E KR   E      A  K  IG G
Sbjct: 249 LTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKISGAQNKKDIGWG 308

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y     + I DHR  L   K+  VL G +D  I   L A 
Sbjct: 309 ---HQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353


>gi|224371835|ref|YP_002605999.1| PrfB [Desulfobacterium autotrophicum HRM2]
 gi|223694552|gb|ACN17835.1| PrfB [Desulfobacterium autotrophicum HRM2]
          Length = 329

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 107/328 (32%), Positives = 174/328 (53%), Gaps = 10/328 (3%)

Query: 22  RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
            +++    +     T +    + I   I  +D+   E +D  T++   + + +     ++
Sbjct: 1   MIAQEDFWNDPDTATAKLKERTRISDLIETWDKIFAEIEDAETLLELAHEEEDKEVEREV 60

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           E+       +    + +  ++    DD KS I+ I AG GG+++  +   LFRMY R+  
Sbjct: 61  ELQLNRLGQKVK--KFSVAIMLDGEDDTKSAIVSINAGAGGTDSQDWTEMLFRMYTRWID 118

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            +  K++++     D+ G K +  ++SG   +  +K ESGVHR+ R+    A G+  TS 
Sbjct: 119 KKGLKLQMIDYQPGDEAGIKGVTFSVSGEYSYGLLKVESGVHRLVRISPFNAGGKRQTSF 178

Query: 202 ATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V V PE   EI V+I   D+RID  RASG+GGQHVN T SAVRITH+PTG++V    E
Sbjct: 179 ASVFVYPELKDEIRVEIDEGDLRIDVYRASGAGGQHVNKTSSAVRITHLPTGVVVQCQQE 238

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGR-I 316
            SQH+N+  AMKVL++RLY +E+++   +     + K  I  G    +IR+Y     R +
Sbjct: 239 PSQHRNKEIAMKVLQSRLYQLEKEKQNRKMQDLHDTKDDIAWG---SQIRSYVLHPYRMV 295

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLL 344
            DHR +  +  ++ VL G +D  I   L
Sbjct: 296 KDHRTDYEVGDVDRVLDGDLDQFIEETL 323


>gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9211]
 gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9211]
          Length = 356

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/331 (27%), Positives = 161/331 (48%), Gaps = 6/331 (1%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
            ++E   S+    +   K  +E   +  + +++          +D    +  +  + +  
Sbjct: 16  KDLEQIASQPEFWNDQQKAKKEMRRLDEVKAQLKKLVDWDAAIEDAQVSLELYELEPDDE 75

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
            LA+        +     +      L     D +  +L I AG GG++A  +   L RMY
Sbjct: 76  MLAEAIKGLDNLKSDL--DLWELERLLSGQYDKEGVVLSINAGAGGTDAQDWAQMLLRMY 133

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A     KV V   S+ ++ G K     I GR  +  ++ E G HR+ R+    A+G+
Sbjct: 134 TRWADDHGMKVTVDELSEGEEAGIKSATLEIDGRYAYGYLQNEKGTHRLVRISPFNANGK 193

Query: 197 VHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
             TS A V ++P+   E+++DIP +D+ I T R+ G+GGQ+VN  ++AVRI H+P+G+ V
Sbjct: 194 RQTSFAGVEIMPKLEEEVELDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGLAV 253

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
             + E+SQ QN+ +AM +L+A+L  + +++ A++ +  R   I       +IR Y F   
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLMIIAQEQRASQIADIR-GDIVEAAWGNQIRNYVFHPY 312

Query: 315 R-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           + + D R       +E V+ G +D  I  LL
Sbjct: 313 QMVKDLRTGKESTDVEGVMNGDLDPFIQALL 343


>gi|330828582|ref|YP_004391534.1| peptide chain release factor 2 [Aeromonas veronii B565]
 gi|328803718|gb|AEB48917.1| Peptide chain release factor 2 [Aeromonas veronii B565]
          Length = 300

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I    Q   + + L ++  +   +    +      +A  +++     ++ +  +   
Sbjct: 2   VGTIDTLTQGVDDVEMLVSLAVEGEDEETFNEA-----IAESEQLEAKLVDLEFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C ++I++G+GG+EA  +   + RMY R+     +K E++  S+ D  G K    
Sbjct: 57  QHDGSDCYIDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
             +G   F  ++ E+GVHR+ R    ++ GR HTS  +V V PE  +         D+RI
Sbjct: 117 KFTGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRI 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVN T+SAVRITH+PTG++V   +++SQH+N+ + MK L+A+LY++E +
Sbjct: 177 DVYRASGAGGQHVNRTESAVRITHVPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQ 236

Query: 284 RMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+ A    K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 237 KQNAEKQALEETKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIE 293

Query: 342 PLLT 345
             L 
Sbjct: 294 ASLK 297


>gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
 gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
          Length = 370

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 167/340 (49%), Gaps = 14/340 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN--S 71
            R  E+     +    +      +     + I++ +      + E  D   +        
Sbjct: 30  KRLEELNALSEDPDFWNDAENAQKLMRERTKIVTAMDDITALETEISDAEEMAEMAEMEG 89

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  + +     + A        E       L     D   C +EI AG GG+E+  +   
Sbjct: 90  DDSLLEDIVESMKAALIRAERAEL----SALLSGEVDGNDCFVEINAGAGGTESQDWANM 145

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A     KVE L S D ++ G K     +SG   +  +K ESGVHR+ R+   
Sbjct: 146 LRRMYVRWANAHGMKVEELDSHDGEEAGIKSATLKVSGENAYGWLKSESGVHRLVRISPF 205

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++ + HTS ++VAV P     I+V+I  +D+R DT RASGSGGQH+N TDSA+R+TH P
Sbjct: 206 DSNAKRHTSFSSVAVSPVLDDTIEVEIEDKDVRTDTYRASGSGGQHINKTDSAIRLTHAP 265

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIR 307
           TGI+V   S++SQH+NR  A  +LRAR+Y+++ +    A + +A+ K  IG G    +IR
Sbjct: 266 TGIVVACQSDRSQHKNRASAWNMLRARIYELKMRERAEAAQANADAKTDIGWG---HQIR 322

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y     + I D R  +     + VL G +D  +   L+A
Sbjct: 323 SYVLQPYQMIKDLRTGVETSDTKGVLDGDLDKFLAASLSA 362


>gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 327

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 110/330 (33%), Positives = 177/330 (53%), Gaps = 16/330 (4%)

Query: 23  MSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    D+  K   + +E  +I+ ++       ++  E + L  +  +      I +  
Sbjct: 1   MAQDGFWDSPDKNTAILKERTSITSLVEGWEKLAEELSEAEVLLELGVEEEDGQTIEEAR 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                    +I +  ++++   +    DD ++ I+ I AG GG++A  +   L RMY R+
Sbjct: 61  -----QHLVKIEKGIDKLSLSRMLDGEDDARNAIVAINAGAGGTDAQDWAEMLLRMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +   ++     D+ G K +  T++G   +  +K E GVHR+ R+    ++G+  T
Sbjct: 116 VEQKGFSYSIIDYQPGDEAGVKGVTFTVTGDYAYGYLKTEEGVHRLVRISPFNSNGKRQT 175

Query: 200 SAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+VAV PE  +   VD+  +D+RID  RASG+GGQHVN T SAVRI HIPTGI+V   
Sbjct: 176 SFASVAVYPEIDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHIPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGR 315
            EKSQH+NR  AMKVL+ARLY VE+++   +       K +IG G+   +IR+Y     +
Sbjct: 236 QEKSQHRNRDLAMKVLKARLYQVEQEQQQKQMQDNYEAKEEIGFGN---QIRSYVLHPYQ 292

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            + DHRIN+ +  +  VL G ID  I  +L
Sbjct: 293 MVKDHRINMDVGNVNAVLDGDIDPFIEAVL 322


>gi|94987335|ref|YP_595268.1| protein chain release factor B [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731584|emb|CAJ54947.1| Protein chain release factor B [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 362

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 129/344 (37%), Positives = 177/344 (51%), Gaps = 16/344 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
           KNR +EIE  +S   +      LT   +E + +     +         E  D   ++ + 
Sbjct: 14  KNRLSEIEKILSAPDAWSNPEALTPILKEKSQLEADNLRFEKLHLCHTEMIDWFELVQEF 73

Query: 69  ---HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
              + S +E  +      L ++K    +E    YLLL  + D     ILEI  G GG+EA
Sbjct: 74  LTTNESSTEFLEALTALELQVKKFQDAMEEAEMYLLLGAEEDKM-DAILEIHPGAGGTEA 132

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A L  +  E +     D+ G K +   ISG   +  +K E G+HR+
Sbjct: 133 QDWAEMLERMYLRWADLHGFSKEEMDYLPGDEAGIKSVTLRISGENAYGLLKGERGIHRL 192

Query: 186 QRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++SGR HTS A+V V+P+A  E+ +DI   D+RID  R+SG GGQ VNTT SAV
Sbjct: 193 IRISPFDSSGRRHTSFASVDVIPDAGEEVVIDIKDSDLRIDVFRSSGPGGQSVNTTSSAV 252

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHIPTGI+    +EKSQH N+  AM++LRARLY+ E K     + A    K  I  G 
Sbjct: 253 RITHIPTGIVAQCQNEKSQHHNKESAMRILRARLYEQEIKLRDAAKQAQYMGKEAISFG- 311

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
              +IRTY     R + DHR N     +E VL G ID  IN  L
Sbjct: 312 --SQIRTYTMQPYRLVKDHRTNCESSDVEAVLGGQIDKFINSYL 353


>gi|282891215|ref|ZP_06299718.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498908|gb|EFB41224.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 341

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 174/343 (50%), Gaps = 10/343 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +   + +   +E  M      D      +  A  + + +    Y   K+   ++  ++ +
Sbjct: 1   MASKEAKVKALETEMEAPTFWDDNDAAQKVIAECNALKAWTIPYHDLKERYSNVSELLQE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                E  +    E++     I     E+    +     D K+  L I AG GG+EA  +
Sbjct: 61  AFDLGE--ESLIQELVEELDSIEASLKELEIRKMLAGELDSKNAFLSINAGAGGTEACDW 118

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           V  L RMY+R+AA + WKVEV+ + D D  G K I    +G   +   K E GVHR+ R+
Sbjct: 119 VLMLSRMYQRWAAKKNWKVEVIDTVDGDVAGIKSITYKFTGPFAYGYAKAEKGVHRLVRI 178

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V + PE   +I ++I  ED+R+DT RASG+GGQHVN TDSAVR+T
Sbjct: 179 SPFDSNAKRHTSFASVDITPEITDDIQIEIRPEDLRVDTFRASGAGGQHVNRTDSAVRLT 238

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSE 304
           H+PTGI+V   +++SQ QN+    K+LR++LY++E     N   A    K +I  G    
Sbjct: 239 HLPTGIVVSCQAQRSQLQNKETCYKMLRSKLYEMEVTARENALKAMGGEKKEIAWG---S 295

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR Y F     + D R  +    ++ V+ G +DD +N  L  
Sbjct: 296 QIRNYVFQPYTLVKDTRTKVECGNIQAVMDGELDDFVNAYLME 338


>gi|218248175|ref|YP_002373546.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
 gi|226739124|sp|B7K0A6|RF2_CYAP8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218168653|gb|ACK67390.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
          Length = 365

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 92/344 (26%), Positives = 161/344 (46%), Gaps = 7/344 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L     ++E   ++    D      +    ++ + S +  Y Q   + +DL  +  
Sbjct: 25  DLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQWMGQLEDLKAIAE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +     + E    +       +      L     D K  +L I AG GG++A  
Sbjct: 85  LLELEEDATLNEEAEANLTQLNHEL--DRWELQRLLSGIYDSKGAVLTINAGAGGTDAQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + +KV +   S+ D+ G K     I GR  +  +K E G HR+ R
Sbjct: 143 WAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +    A+G+  TS A + V+P  E  ++ V+IP +D+ I T R+ G GGQ+VN  ++AVR
Sbjct: 203 ISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGGQNVNKVETAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + H+PTGI V  + E+SQ QN+ +A+ +L+A+L  + +++ A   +  R   +       
Sbjct: 263 VVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIRGDMVE-AAWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR Y F   + + D R N     +  V+ G +D  I   L ++
Sbjct: 322 QIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLRSN 365


>gi|15610242|ref|NP_217621.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Rv]
 gi|31794284|ref|NP_856777.1| peptide chain release factor 2 [Mycobacterium bovis AF2122/97]
 gi|121638990|ref|YP_979214.1| peptide chain release factor 2 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662959|ref|YP_001284482.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|148824297|ref|YP_001289051.1| peptide chain release factor 2 [Mycobacterium tuberculosis F11]
 gi|167969713|ref|ZP_02551990.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|215405101|ref|ZP_03417282.1| peptide chain release factor 2 [Mycobacterium tuberculosis 02_1987]
 gi|215412969|ref|ZP_03421670.1| peptide chain release factor 2 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428558|ref|ZP_03426477.1| peptide chain release factor 2 [Mycobacterium tuberculosis T92]
 gi|215432061|ref|ZP_03429980.1| peptide chain release factor 2 [Mycobacterium tuberculosis EAS054]
 gi|215447387|ref|ZP_03434139.1| peptide chain release factor 2 [Mycobacterium tuberculosis T85]
 gi|218754875|ref|ZP_03533671.1| peptide chain release factor 2 [Mycobacterium tuberculosis GM 1503]
 gi|224991482|ref|YP_002646171.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253797794|ref|YP_003030795.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           1435]
 gi|254233729|ref|ZP_04927054.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C]
 gi|254365733|ref|ZP_04981778.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254552185|ref|ZP_05142632.1| peptide chain release factor 2 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188141|ref|ZP_05765615.1| peptide chain release factor 2 [Mycobacterium tuberculosis CPHL_A]
 gi|260202247|ref|ZP_05769738.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289444669|ref|ZP_06434413.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289448784|ref|ZP_06438528.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CPHL_A]
 gi|289553103|ref|ZP_06442313.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           605]
 gi|289571312|ref|ZP_06451539.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T17]
 gi|289575817|ref|ZP_06456044.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           K85]
 gi|289746915|ref|ZP_06506293.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           02_1987]
 gi|289751781|ref|ZP_06511159.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T92]
 gi|289755223|ref|ZP_06514601.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           EAS054]
 gi|289759231|ref|ZP_06518609.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T85]
 gi|289763284|ref|ZP_06522662.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM
           1503]
 gi|294993388|ref|ZP_06799079.1| peptide chain release factor 2 [Mycobacterium tuberculosis 210]
 gi|297635740|ref|ZP_06953520.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732739|ref|ZP_06961857.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526578|ref|ZP_07013987.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777415|ref|ZP_07415752.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu001]
 gi|313660071|ref|ZP_07816951.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2076680|emb|CAB08395.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium
           tuberculosis H37Rv]
 gi|31619879|emb|CAD96819.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium
           bovis AF2122/97]
 gi|121494638|emb|CAL73119.1| Probable peptide chain release factor 2 prfB [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124599258|gb|EAY58362.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C]
 gi|134151246|gb|EBA43291.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148507111|gb|ABQ74920.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|148722824|gb|ABR07449.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           F11]
 gi|224774597|dbj|BAH27403.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319297|gb|ACT23900.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           1435]
 gi|289417588|gb|EFD14828.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289421742|gb|EFD18943.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437735|gb|EFD20228.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           605]
 gi|289540248|gb|EFD44826.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           K85]
 gi|289545066|gb|EFD48714.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T17]
 gi|289687443|gb|EFD54931.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           02_1987]
 gi|289692368|gb|EFD59797.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T92]
 gi|289695810|gb|EFD63239.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           EAS054]
 gi|289710790|gb|EFD74806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM
           1503]
 gi|289714795|gb|EFD78807.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T85]
 gi|298496372|gb|EFI31666.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214303|gb|EFO73702.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu001]
 gi|326902672|gb|EGE49605.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           W-148]
 gi|328457573|gb|AEB02996.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           4207]
          Length = 378

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L++R  ++E   S+    D   +     + +S    ++   ++ ++   DL  +  
Sbjct: 31  DVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRLDDLPVLYE 90

Query: 68  DHNSDSEIRDLAQIEVLAIEKEI-RELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               ++       +     E +  R          L     D++  ++ IR+G GG +AA
Sbjct: 91  LAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAA 150

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 151 DWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLV 210

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 211 RISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVR 270

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIP+GI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K   GS     
Sbjct: 271 LTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERKRLEERAELDAL-KADGGS-SWGN 328

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R    +     VL G +D  +   +     +
Sbjct: 329 QMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWRNRR 375


>gi|293606108|ref|ZP_06688473.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
           43553]
 gi|292815563|gb|EFF74679.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
           43553]
          Length = 300

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  ++       +  +L  +    + D    +  + +  A ++++  LE    +  +  +
Sbjct: 2   VETLTSLGTGLADANELFELAK-ADDDDSTLESIEKDADAFQEKLENLE----FRRMFSN 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C L+I+AG GG+EA  +   L R Y RYA  + +KVEVL  S+ D  G K    
Sbjct: 57  PADPLNCFLDIQAGAGGTEAQDWASMLLRQYLRYAERKGFKVEVLEESEGDVAGIKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
            + G   F  ++ E+GVHR+ R    ++SG  HTS A+V V PE     +V++   D+R+
Sbjct: 117 KMEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH+NR  AM++L+++LY++E +
Sbjct: 177 DTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
               E+    + K  +G G    +IR+Y   Q RI D R N+ +   + VL G +D  I 
Sbjct: 237 NRMAEQQKLEDSKTDVGWG---HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQ 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|294624919|ref|ZP_06703574.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666711|ref|ZP_06731947.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292600798|gb|EFF44880.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603536|gb|EFF46951.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 313

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +   +  I+       +  DL  +  +   D +       ++   +  + +LE +     
Sbjct: 2   LEKTVIGIADVLSGLADAGDLLELA-ESEQDEDTAVAVIADLDNYQAHVEKLEFQRM--- 57

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
                 D  +  ++I+AG GG+EA  +   L RMY R+A  R WK E++  S  +  G K
Sbjct: 58  -FSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                I G   +  +K E GVHR+ R    ++  R HTS  +V V PE    I++DI   
Sbjct: 117 SATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPA 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQNR  AMK+L A+LY+
Sbjct: 177 DLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYE 236

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+ A    K  IG G    +IR Y   Q RI D R  +     + VL G +D
Sbjct: 237 LEVQKRNAEKDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTGIERSDTQKVLDGDLD 293

Query: 338 DIINPLLTA 346
           + +   L A
Sbjct: 294 EFVEASLKA 302


>gi|239941657|ref|ZP_04693594.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
 gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           11379]
          Length = 352

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 7/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 9   DLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEALRGRIDDLEVLFE 68

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++ +    A+ E      +    E  +    L     D +  ++ IRA  GG +AA 
Sbjct: 69  LAEAEGDADAQAEAETELESVKKALDE--MEVRTLLSGEYDAREALVTIRAEAGGVDAAD 126

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K EV  ++  ++ G K     +     +  +  E G HR+ R
Sbjct: 127 FAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRLVR 186

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 187 ISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRL 246

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    + +A +    G      +
Sbjct: 247 THLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD--GGNSWGNQ 304

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 305 MRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRKQR 350


>gi|170743911|ref|YP_001772566.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
 gi|168198185|gb|ACA20132.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
          Length = 321

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 108/317 (34%), Positives = 161/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             +   +   ++ I   +Q  ++   L  +      ++ IR+  +       +  R    
Sbjct: 1   MRDRNDLEEAVASIRRLEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  RK+KV+++  S+ 
Sbjct: 57  -RQIETLLAGEADGNDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVDIVEWSEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   +++ R HTS A+V V P     I 
Sbjct: 116 EEAGIKGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIT 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +++   D RIDT R+SG+GGQHVNTTDSAVRITH+PTGI+V    E+SQH+NR  A  +L
Sbjct: 176 IEVKESDCRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVACQQERSQHKNRATAWNML 235

Query: 274 RARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+   + +A    K  IG G    +IR+Y     + + D R        + 
Sbjct: 236 RARLYELELKKREEKANAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGTQSTSPDD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G ID  I   L   
Sbjct: 293 VLDGDIDPFIEASLAQR 309


>gi|95929408|ref|ZP_01312151.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134524|gb|EAT16180.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684]
          Length = 312

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 174/316 (55%), Gaps = 13/316 (4%)

Query: 37  EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENE 96
           +E  A+  ++   +   Q  ++ + L  +  +   ++   ++ ++       E+    ++
Sbjct: 3   KERTALQKLVDGWTSAAQTVEDLEVLVELGAESEDEATRDEVREL-----LPELERQVDK 57

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
           + +  +     D  + IL I AG GG+EA  +   L RMY R+  ++ +K ++      D
Sbjct: 58  MEFARMLSGEHDSSNAILSINAGAGGTEAQDWADMLLRMYLRFCDIKGFKTKITDYQPGD 117

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDV 215
           D G K +  T+ G   +  ++ E G+HR+ R+   +A+ + HTS  +V V PE    I+V
Sbjct: 118 DAGVKSVTFTVEGDYAYGWLRPEMGIHRLVRISPFDAASKRHTSFCSVFVFPELDDSIEV 177

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           ++  +D++IDT RASG+GGQH+N TDSA+RITHIP+GI+V    ++SQH N+  A++ L+
Sbjct: 178 ELLDKDMKIDTFRASGAGGQHINKTDSAIRITHIPSGIVVACQDQRSQHNNKAEAIRQLK 237

Query: 275 ARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYV 331
           ARLY++ER++   E +A    K +IG G    +IR+Y     R + DHR    +   + V
Sbjct: 238 ARLYELERQKKEEEANALSGDKKEIGWG---SQIRSYVLHPYRMVKDHRTGFEVGNADSV 294

Query: 332 LQGYIDDIINPLLTAH 347
           L G+I+  I   L A+
Sbjct: 295 LDGHIEGFIEAYLLAN 310


>gi|323342407|ref|ZP_08082639.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463519|gb|EFY08713.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 347

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 12/350 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
           + H  +   + +  E+E  M E    D +   ++   +   +  ++       ++     
Sbjct: 1   MIHFDLAQKEAKIKELESEMVEDGFWDDHRHSSQHIQKLNQLKKVVETHHDLLERLMSCS 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D   ++ +   +     L        ++         + L+L     D K+ I+EI  G 
Sbjct: 61  DSILLLKEEADEEFQNSLEVEVKEIQKEM-----ESFSVLVLLSHDYDQKNAIVEIHPGA 115

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+E+  F   L+RMY R+A    +K+ VL+  D D+ G K +  ++SG   +  +K E 
Sbjct: 116 GGTESQDFAEMLYRMYTRWAQDHGFKISVLNYLDGDEAGLKSVSFSVSGMFAYGYLKAEK 175

Query: 181 GVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHR+ R+   ++SGR HTS A+V V       I++ I  EDI +DTMRA+G+GGQHVN 
Sbjct: 176 GVHRLVRISPFDSSGRRHTSFASVDVAPEFDNSIEITILPEDIDVDTMRATGAGGQHVNK 235

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH  TGI+V   + +SQ QNR  A+ +L+++LY  E +    + +A  K +  
Sbjct: 236 TDSAVRITHKKTGIVVTCQAGRSQLQNREEALMMLKSKLYQREIEEKQAQLAAI-KGEHK 294

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +   +IR+Y       + DHR      +   VL G IDD I   L  +
Sbjct: 295 LIEWGSQIRSYVAHPYTMVKDHRTKFETSQYGDVLDGDIDDFIEAFLKMN 344


>gi|223558105|gb|ACM91108.1| peptide chain release factor 2 [uncultured bacterium Rlip2]
          Length = 330

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 12/330 (3%)

Query: 23  MSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      D       L +E A +   +   +    K  +   L  +  +   +    D+ 
Sbjct: 1   MGAPDFWDDAEAAQALNQELADLKGGVDTYNALVAKTDDLMTLWEMGMEEKDEGVEADVK 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                     ++     +   LL     D  +  LE+ AG GG+EA  +   L RMY R+
Sbjct: 61  AEY-----DSLKNELRSLELELLLSGEYDANNAYLELHAGAGGTEAQDWTQMLLRMYGRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + VE L     D+ G K ++  + G   +  +K E GVHR+ R+   +++ R HT
Sbjct: 116 AERHGFSVETLDLQPGDEAGVKSVMLFVKGHNAYGYLKSEKGVHRLVRISPFDSNARRHT 175

Query: 200 SAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S +   V+PE  +  +V+I ++D+R+DT R+SG+GGQH+N T SAVR+TH+PTGI+V   
Sbjct: 176 SFSACDVMPEMEDAKEVEIDMDDVRVDTYRSSGAGGQHINKTSSAVRMTHMPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QNR   +++LRA+L+++E K+   ER+    +Q    +   +IR+Y F     +
Sbjct: 236 NERSQIQNREVCLRMLRAKLFELEEKKKEEERAKLEGVQQK-IEWGSQIRSYVFQPYTMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            DHR       ++ V+ G ID  I   L A
Sbjct: 295 KDHRTGEETGNVQAVMDGEIDPFIESFLAA 324


>gi|218885659|ref|YP_002434980.1| peptide chain release factor 2 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|65736690|dbj|BAD98502.1| peptide release factor 2 [Desulfovibrio vulgaris]
 gi|218756613|gb|ACL07512.1| Peptide chain release factor 2 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 376

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 123/340 (36%), Positives = 183/340 (53%), Gaps = 11/340 (3%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           +NR  EIE ++S   + +   KLT   +E + +   I+++   +  +++  +  T+  + 
Sbjct: 31  RNRLDEIERQLSSPDAWNNPEKLTPVLQEKSQLEGEITRLERLETCRRDVTEWLTLAEEE 90

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +  E    A   +      ++ L  E    +L    +D    I+EI  G GG+EA  + 
Sbjct: 91  EAAGEPGQEALESLAEQVTVLQNLLQETEMNMLLSGKEDRMPAIVEIHPGAGGTEAQDWA 150

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A     K E L     D+ G K +   ++G   +  +K E G+HR+ R+ 
Sbjct: 151 EMLVRMYLRWADTHDMKAEYLDYLAGDEAGVKSVTLRMAGPNAYGLLKGEKGIHRLIRIS 210

Query: 190 ATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++SGR HTS A+V V+P+   EI VDI   D+RID  R+SG GGQ VNTT SAVRITH
Sbjct: 211 PFDSSGRRHTSFASVDVIPDVGQEITVDIKETDLRIDIFRSSGPGGQSVNTTSSAVRITH 270

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
           +PTGI     +EKSQH NR  AM++LRARLY++E +++  E+ A    K  IG G    +
Sbjct: 271 LPTGISAQCQNEKSQHSNRDTAMQILRARLYELELRKLEEEKKAQYAGKDAIGFG---SQ 327

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           IRTY     R + DHR N  +  +E VL G ID ++   L
Sbjct: 328 IRTYTLQPYRLVKDHRTNTEIGDVEAVLDGRIDQLLRDYL 367


>gi|84515548|ref|ZP_01002910.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
 gi|84510831|gb|EAQ07286.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
          Length = 374

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 112/339 (33%), Positives = 170/339 (50%), Gaps = 5/339 (1%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E + R+ +    D      +       ++  ++++D  KQE  D   +I     + +
Sbjct: 31  RLEEFDARVEDPTLWDDPDAAQKLMRDRQVLVDTLTMHDTIKQELADNIELIEMGEMEGD 90

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
                  E     K +RE   +     L     D     LE+ AG GG+E+  +   L R
Sbjct: 91  --ADIITEAEEALKSLREKAAQKELEALLDGEADANDTFLEVNAGAGGTESCDWANMLSR 148

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A  + +KVE+ S    D+ G K +   I G   +  +K ESGVHR+ R+   +++
Sbjct: 149 MYVRWAEKKGYKVELQSMQSGDEAGIKSVTYKIMGHNAYGWLKSESGVHRLVRISPFDSA 208

Query: 195 GRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS  +V V P     I++++   DIR+DT R+SG+GGQHVNTTDSAVRITH PTGI
Sbjct: 209 AKRHTSFTSVKVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQHVNTTDSAVRITHFPTGI 268

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +VTSSEKSQHQNR  AMK L++RLY +E  + +   +   +   G      +IR+Y    
Sbjct: 269 VVTSSEKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHENA-GDAGWGNQIRSYVLQP 327

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + + D R        + VL G +D ++   L    +  
Sbjct: 328 YQMVKDLRTGFETSDTKGVLDGDLDGLMGATLALDMSGK 366


>gi|308233416|ref|ZP_07664153.1| peptide chain release factor 1 [Atopobium vaginae DSM 15829]
          Length = 300

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 152/303 (50%), Positives = 206/303 (67%), Gaps = 7/303 (2%)

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
             + +    ++ D ++D   R++ Q ++ A E+++  LE+EI  +L+P D +D+K  I+E
Sbjct: 1   LDDIEAAKEMLHDADADE--REMLQEDIAANEEKLPALEDEIKIMLIPGDPNDEKDTIVE 58

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           IRAG GG EAA+F GDL++MYER+A  + WKVE+LSSS ++ GG+K I   + G  V+S 
Sbjct: 59  IRAGVGGDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGFKTIEFKMLGEKVYSV 118

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           MK+ESGVHRVQRVP TE+ GR+ TS ATVAVLPEA EID+ I   D+RIDT  ASG GGQ
Sbjct: 119 MKYESGVHRVQRVPKTESQGRIQTSTATVAVLPEADEIDIQIDPTDLRIDTYCASGPGGQ 178

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTT SAVRITH+PT  +V +  ++SQ QNR   M++LRARLY++E ++   E+ A R 
Sbjct: 179 CVNTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQEEQGAARL 238

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGY-IDDIINPLLTAHQAKMI 352
            QIG G+RSE+IRTYN  Q R+TDHRI     Y    VL G  +  II  L  A +A+ +
Sbjct: 239 SQIGHGNRSEKIRTYNQPQDRVTDHRIGFNATYN--GVLLGDTLISIIEALAAAERAEKL 296

Query: 353 GSA 355
             A
Sbjct: 297 AKA 299


>gi|94495879|ref|ZP_01302458.1| protein chain release factor B [Sphingomonas sp. SKA58]
 gi|94424571|gb|EAT09593.1| protein chain release factor B [Sphingomonas sp. SKA58]
          Length = 377

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 16/341 (4%)

Query: 14  NRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    D      ++  E   +   I      + +K +  +L  +     
Sbjct: 32  RRLDELNARVEDPTLWDNAKQAQEVMRERTRLDSAIGATRAIEAEKSDTAELIEMAEAEG 91

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  + +         ++             L     D     LEI AG GG+E+  +  
Sbjct: 92  DEGMVDEAVAALKALADRADE-----DKIKALLAGEADSYDTYLEIHAGAGGTESQDWAE 146

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R +KVE++     D  G K     + G   +   K ESGVHR+ R+  
Sbjct: 147 MLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLMKGENAYGYAKTESGVHRLVRISP 206

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V P    +ID+++   D++IDT RASG+GGQHVNTTDSAVRITH+
Sbjct: 207 YDSSARRHTSFSSVWVYPVIDDDIDIEVKESDLKIDTYRASGAGGQHVNTTDSAVRITHV 266

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           P+GI+V + +++SQH+NR  AM +L+ARLY+ E +R     S++   K +IG G    +I
Sbjct: 267 PSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASSDYQAKTEIGWG---HQI 323

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     + + D R  +T    + VL G +D  +   L+ 
Sbjct: 324 RSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQ 364


>gi|229586524|ref|YP_002845025.1| peptide chain release factor 2 [Rickettsia africae ESF-5]
 gi|259585246|sp|C3PMX2|RF2_RICAE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|228021574|gb|ACP53282.1| Peptide chain release factor RF-2 [Rickettsia africae ESF-5]
          Length = 368

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 10/339 (2%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            R   +E   ++    +      +     S +  K++ +++ K   +D   +     +++
Sbjct: 30  ERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAEN 89

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           ++  L+Q  +    K +  +  +     L     D  +C LEI AG GG+E+  +   + 
Sbjct: 90  DLETLSQ--IEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMM 147

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A    +K E+++  + ++ G K     I G+  +   K E+GVHR+ R+    A
Sbjct: 148 RMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTETGVHRLVRISPFNA 207

Query: 194 SGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           +G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAVRITHIPTG
Sbjct: 208 AGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTG 267

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
            +    S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G    +IR+Y
Sbjct: 268 TVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNATKTDNSWG---HQIRSY 324

Query: 310 NFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
                  + D R +      + VL G +++ ++  L  +
Sbjct: 325 VLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAMN 363


>gi|217034219|ref|ZP_03439638.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10]
 gi|216943387|gb|EEC22846.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10]
          Length = 381

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 45  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELA 104

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 105 QNDND-----EVTLSLLYEEAPILEHSVQKVEIKIMLSGENDASNAIITIQPGAGGTESQ 159

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 160 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 219

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 220 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 279

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 280 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 336

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 337 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 379


>gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 335

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 107/336 (31%), Positives = 170/336 (50%), Gaps = 11/336 (3%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  E++ + S         K  E     S I  +I  + + + +  D  +++     +++
Sbjct: 2   RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             +    EV     ++ +L        L     D+ +C LEI +G GG+E+  +   L R
Sbjct: 62  --EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMR 119

Query: 135 MYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           MY R+A     +KVEV+   D D  G K     I G   +   K ESGVHR+ R+   +A
Sbjct: 120 MYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDA 179

Query: 194 SGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           +G+ HTS A+V V P   +    +   +D++IDT RASG+GGQHVN T+SAVRITHIPTG
Sbjct: 180 NGKRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTG 239

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTY 309
           ++    + +SQH+N+  A+K+L+ RLY +E ++   + +    +K  IG G    +IR+Y
Sbjct: 240 VVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWG---SQIRSY 296

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
                + + D R    +  +  V  G ID  I  +L
Sbjct: 297 VMHPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 332


>gi|309810763|ref|ZP_07704570.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
 gi|308435300|gb|EFP59125.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
          Length = 370

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 98/347 (28%), Positives = 171/347 (49%), Gaps = 11/347 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK +  ++E + +     D      +  +A+S   ++    +       DL  ++ 
Sbjct: 24  DLEKLKKQIVDLEEQSAAPDLWDDPDAAQKITSALSRANAENDRVENMDAAIDDLEVLVE 83

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                +D++    A+ E+  ++K + ELE       L     D++  ++ IRAG GG +A
Sbjct: 84  MGTEENDADTLAEAERELKKLQKAVGELEV----RTLLNGEFDEREAVVTIRAGAGGVDA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +  +V+ +S  ++ G K +   ++    F  +  E+G HR+
Sbjct: 140 ADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSVTFEVNVPYAFGNLSVEAGTHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P       ++IP  +++ID  R+SG GGQ VNTTDSAV
Sbjct: 200 VRISPFDNQGRRQTSFAAVEVVPLIETTDTIEIPENELKIDVFRSSGPGGQSVNTTDSAV 259

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG +V+  +EKSQ QNR  A++V+++RL  ++++    ++         S    
Sbjct: 260 RMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKKQEEDAQKKELAGDIKAS--WG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +++R+Y     + + D R    +     V  G ID  I   +   +A
Sbjct: 318 DQMRSYVLHPYQMVKDLRTEYEVGNTSGVFDGDIDGFIEAGIRWKRA 364


>gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
 gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
          Length = 368

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 7/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEALRGRIDDLEVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              ++ +    A+ E      +    E  +    L     D +  ++ IRA  GG +AA 
Sbjct: 85  LAEAEGDADAQAEAETELESVKKALDE--MEVRTLLSGEYDAREALVTIRAEAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K EV  ++  ++ G K     +     +  +  E G HR+ R
Sbjct: 143 FAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRL 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    + +A +    G      +
Sbjct: 263 THLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD--GGNSWGNQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 321 MRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRKQR 366


>gi|188582408|ref|YP_001925853.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
 gi|179345906|gb|ACB81318.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
          Length = 321

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 108/317 (34%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   ++ I   +Q  ++   L  +       + I +          K + +   
Sbjct: 1   MRERQELDEAVTAIKKLEQDLEDAATLIELGEMEGDQASITEGENAI-----KAVEKEAA 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  RK+KVE++  +D 
Sbjct: 56  SRQVETLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   +++ R HTS A+V V P     I+
Sbjct: 116 EEAGIKGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I   D RIDT R+SG+GGQHVNTTDSAVRITH PTGI+V    E+SQH+NR  A  +L
Sbjct: 176 IEIKESDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNML 235

Query: 274 RARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+   + +A    K  IG G    +IR+Y     + + D R        + 
Sbjct: 236 RARLYEAELKKREEKANAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGTQSTDPDE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGDLDPFMEASLAQR 309


>gi|332185456|ref|ZP_08387204.1| peptide chain release factor 2 [Sphingomonas sp. S17]
 gi|332014434|gb|EGI56491.1| peptide chain release factor 2 [Sphingomonas sp. S17]
          Length = 375

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 159/342 (46%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    +       +  E   +   I+     + +     +L  +     
Sbjct: 30  RRLDELNARVEDQALWNDPKQAQAVMRERRRLDEAITATRAIENELSGTVELIELAEMEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +   ++         ++             L     D     +EI AG GG+E+  + G
Sbjct: 90  DEELEKEAVTSLGDLAKRAEA-----DKVKALLAGEADANDSYIEINAGAGGTESQDWAG 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R  KVE++     +  G K     + G   +   K ESGVHR+ R+  
Sbjct: 145 MLQRMYTRWAERRGMKVELIDYHAGEQAGIKSATLLVKGENAYGYAKVESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS ++V V P     I+V+I   ++RIDT RASG+GGQH+NTTDSAVRITH+
Sbjct: 205 YDSAARRHTSFSSVWVYPVIDDNIEVEINESELRIDTYRASGAGGQHINTTDSAVRITHL 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERI 306
           PTGI+V   +++SQH+N+  A   LRARLY+ E        +A    K  IG G    +I
Sbjct: 265 PTGIVVQCQNQRSQHKNKAEAYNQLRARLYERELAEREAVANAENATKTDIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R  +T      VL G +D  +   L+  
Sbjct: 322 RSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDAFMAAALSQR 363


>gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5]
 gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5]
          Length = 367

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 175/348 (50%), Gaps = 18/348 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   + R AE+   + +    +   +      E   +   ++  +   +  ++ + LH 
Sbjct: 24  DVPAKEERLAELVPMIEDPTLWNDPQQAQGILREDKMLKDALADFNEIHRLLEDVKVLHE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
              +  S+ +              ++ +L  +    +L  D  D  +  L I AG GG+E
Sbjct: 84  FCQEDESNVDEL-------TQNLAKLEKLVADYELTVLLSDEHDPSNAYLTINAGAGGTE 136

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  RK+KV ++   + ++ G K +   I G   +  +K E+GVHR
Sbjct: 137 SQDWGSMLMRMYTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEGLYAYGNLKSETGVHR 196

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS  +V V PE  +  +VDI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 197 LVRISPFDSNARRHTSFTSVFVSPEIDDSIEVDIRESDLRIDTYRSSGAGGQHVNTTDSA 256

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSG 300
           VRITH PTG++    SE+SQHQN+ +AMK+LRA+LY++E ++         + K+ I  G
Sbjct: 257 VRITHTPTGVVTQCQSERSQHQNKEQAMKMLRAKLYELELEKKRQGLREVEDSKMDIAWG 316

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y       + D R        E VL G +D+ I   L   
Sbjct: 317 ---SQIRSYVLHPYKMVKDLRTRHETGNAEAVLDGALDEFIKAYLQWQ 361


>gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
 gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
          Length = 330

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 104/335 (31%), Positives = 169/335 (50%), Gaps = 17/335 (5%)

Query: 22  RMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            M+E    D   +  +      A+  +++     ++  ++      ++ +   +   ++L
Sbjct: 1   MMTEPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQEEFDEDMKQEL 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
               V    +      +     LL     D  + ILE+  G GG+E+  +V  L RMY+R
Sbjct: 61  ENNVVEFKAEI-----DHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y     +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR H
Sbjct: 116 YCEQSGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRH 175

Query: 199 TSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           TS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V 
Sbjct: 176 TSFASCDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVN 235

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQ 313
             +E+SQ +NR  AMK+L+++LY ++ +    E +  R  Q  IG G    +IR+Y F  
Sbjct: 236 NQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWG---SQIRSYVFHP 292

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              + DHR N    K++ V+ G I   I   L   
Sbjct: 293 YSMVKDHRTNEETGKVDAVMDGDIGPFIEAYLRHQ 327


>gi|45656368|ref|YP_000454.1| peptide chain release factor 2 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798054|sp|Q72V33|RF2_LEPIC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|45599602|gb|AAS69091.1| peptide chain release factor 2 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 367

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 169/345 (48%), Gaps = 16/345 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +   K+R   +  +  +    +   +    +++   +   ++      Q   +  DL  +
Sbjct: 29  LEQDKDRLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFTIQQDILDFPDLVDL 88

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D   ++ + +L+       EK        +  L   K+ +D K   L I  G GG+E+
Sbjct: 89  TLDEKGENGVGELSSEYNRLQEKFEE-----LELLGALKNPEDLKPAFLNIHPGAGGTES 143

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY RY   + ++  ++     D  G K     + G   F  +K E+GVHR+
Sbjct: 144 QDWAEMLLRMYTRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFLKGENGVHRL 203

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ R HTS  +V V P    +ID+ I  +DIR+D  R+SG+GGQHVNTTDSAV
Sbjct: 204 VRISPFDANKRRHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAV 263

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD--VERKRMANERSANRKLQIGSGD 301
           RITH+P+GI+V   +E+SQ +NR  A K+L+ARLY+   E+ +   E+ +  K  I  G 
Sbjct: 264 RITHMPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSGEKKDITWG- 322

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y F     + DHR +     +  V+ G I+  I   L 
Sbjct: 323 --SQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|326914097|ref|XP_003203364.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Meleagris gallopavo]
          Length = 455

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 128/363 (35%), Positives = 199/363 (54%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRM-SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K +  L   + ++   + ++S +      L    A +SP+ +      + + E ++L T
Sbjct: 83  QKYLETLSKEYQQVNSLLNADSKNEFEQRTLRRRSADLSPVATAFQEIKEAEGELRELET 142

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRE--LENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +  +  S  E + L            +   L  ++  LL+PK+  D    ILE+ AG  T
Sbjct: 143 MCRELGSREEKQLLELALEEKETLNKKINTLCRKLFQLLVPKEKYDKSHVILEVTAGRTT 202

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ YA  + W  ++L+    + GG     A ISG  V+  +K+E 
Sbjct: 203 GGDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEG 262

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G HRVQR+P T  S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 263 GTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGGQHV 322

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVRI H+PTG++V    E+SQ  N+  A++ LRA+LY    ++  ++  + RKLQ
Sbjct: 323 NKTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQIIEKQLSQEQSARKLQ 382

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI+     ++ +L G   +D +IN LL   + + +  
Sbjct: 383 LGTRAQSERIRTYNFTQDRVTDHRISYDARNIKEILSGKEELDKLINRLLEFAEMEALTE 442

Query: 355 ASE 357
             E
Sbjct: 443 YLE 445


>gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC
           824]
 gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018]
          Length = 329

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 6/332 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    +   +  E    I  +  +I  ++  +   +D + +I     D    +  +I 
Sbjct: 1   MQEPDFWNDVKRAQEISMEIKFLKGRIDRFNSIESRIEDDNVLIEMCREDENEEEADEIL 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               +       +     ++     D  + IL +  G GG++A  +   L RMY R+A  
Sbjct: 61  KEVRDLHEEV--DNFKIEIILSGEYDRNNAILNLHTGVGGTDAQDWTQMLLRMYTRWAEA 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KV+++     D+ G K +   I G   +  +K E G+HR+ R+    A+G+  TS A
Sbjct: 119 KGFKVDIIDMLPGDEAGIKSVSINIDGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178

Query: 203 TVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V VLP+  +     I  ED+++DT RASG+GGQHVN T+SAVRITH+PTGI+V   SE+
Sbjct: 179 SVEVLPQLTQSQDIVIRPEDLKVDTYRASGAGGQHVNKTESAVRITHLPTGIVVQCQSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+  AM +L+++L +++ +RM  E+  +   ++       +IR+Y F     + DH
Sbjct: 239 SQHSNKETAMNMLKSKLVELK-ERMHKEKVEDLAGELKDMGWGNQIRSYVFQPYTMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R  +    ++ V+ G ID  I   L    ++ 
Sbjct: 298 RTGVETSNVDAVMDGEIDKFIIEYLNKENSQK 329


>gi|317179974|dbj|BAJ57760.1| peptide chain release factor 2 [Helicobacter pylori F32]
          Length = 381

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 45  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELA 104

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 105 QNDND-----EVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 159

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 160 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 219

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 220 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 279

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 280 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 336

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 337 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 379


>gi|157803496|ref|YP_001492045.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
 gi|157784759|gb|ABV73260.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
          Length = 350

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/353 (28%), Positives = 170/353 (48%), Gaps = 16/353 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
                 I     R  E+    +     +       L  E + +   ++ ++      ++ 
Sbjct: 1   MRGLFDIKTATKRLKELAELTTNPDLWNDQVNAQTLLREKSTLEEKLNTLNKLKSNLKDT 60

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +L  +    N    +  + Q       K +  +  +     L     D  +C LEI AG
Sbjct: 61  LELEALAETENDLETLAQVKQD-----LKNLSIIAAKFETEYLFSGEADCNNCFLEINAG 115

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+E+  +   + RMY R+A    +K E+++  + ++ G K     I G+  +   K E
Sbjct: 116 AGGTESHDWASIMMRMYLRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTE 175

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVN 238
           +GVHR+ R+    A+G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVN
Sbjct: 176 AGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNISITIDDKDLRIDTFRASGAGGQHVN 235

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KL 295
           TTDSAVRITHIPTG +    S++SQH+N+ +AM++L+A+LY++E ++  +  +     K 
Sbjct: 236 TTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKT 295

Query: 296 QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               G    +IR+Y     + + D R +        VL G +++ ++  L  +
Sbjct: 296 DNSWG---HQIRSYILQPYQMVKDLRTDYETSDTRGVLDGNLEEFVSASLAMN 345


>gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074]
 gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074]
          Length = 371

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 167/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRSRLDDLGVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D++ R  A+ E+ ++ K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  LAEAEDDADTRAEAESELASVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R +K EV  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G     
Sbjct: 261 RLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRKQR 366


>gi|296283820|ref|ZP_06861818.1| peptide chain release factor 2 [Citromicrobium bathyomarinum JL354]
          Length = 375

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 106/342 (30%), Positives = 159/342 (46%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
               E+  R+ +    D       +  E   +   I  ++    +  +  +   +     
Sbjct: 30  RELDELNARVEDPTLWDDPKQAQAIMREQKRLESAIGTVNTISSEMADAIEFVEMGEAEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D  + +          +             L     D     LE+ AG GG+E+  +  
Sbjct: 90  DDDIVNEGLTSLEKLAARADA-----DKVQALLSGEADANDAYLEVHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R +KVE +     +  G K +   I G   +   K ESGVHR+ R+  
Sbjct: 145 MLMRMYVRWAEKRGFKVETVEYQSGEQAGIKSVTLHIKGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V P    +I+++I   D++IDT RASG+GGQHVNTTDSAVRITH 
Sbjct: 205 YDSSARRHTSFSSVWVYPVIDDDIEIEINESDLKIDTYRASGAGGQHVNTTDSAVRITHQ 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTGI+V + +++SQH+NR  AM +L+ARL++ E        S     K +IG G    +I
Sbjct: 265 PTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAAASGEYAEKTEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R   T      VL G ID  I+  L   
Sbjct: 322 RSYVLQPYQLVKDLRTGETSTAPGDVLDGAIDPFISAALAQR 363


>gi|323135929|ref|ZP_08071012.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
 gi|322399020|gb|EFY01539.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
          Length = 322

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 106/317 (33%), Positives = 161/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   +  I    +  ++   L  +  +   +   ++  +     ++        
Sbjct: 1   MRERTQLEEQMGAIDKLSRDLEDALTLVELGEEAGDEDTEKEGVEALKAVLKDA-----Q 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     +EI +G GG+E+  +   LFRMY R+A  +K+KVEV+  +  
Sbjct: 56  RRQIEALFSGEADGNDTFIEIHSGAGGTESQDWARMLFRMYARWAERKKFKVEVIEETAG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G       K ESGVHR+ R+   +++ R HTS A+V V P     I+
Sbjct: 116 EEAGIKSGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDRIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V+I   D RIDT R+SG+GGQHVNTTDSA+RITHIPTGI+V   +E+SQH+NR  A  +L
Sbjct: 176 VNINESDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNML 235

Query: 274 RARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E ++   E  ++A  K  IG G    +IR+Y     + + D R  +T      
Sbjct: 236 RARLYELELEKREAEANKAAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGVTSGTPSE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +DD +   L   
Sbjct: 293 VLDGELDDFMQASLAQR 309


>gi|126729874|ref|ZP_01745687.1| peptide chain release factor 2 [Sagittula stellata E-37]
 gi|126709993|gb|EBA09046.1| peptide chain release factor 2 [Sagittula stellata E-37]
          Length = 374

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 164/348 (47%), Gaps = 8/348 (2%)

Query: 2   VFLSHKQI--CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           + L  +++     ++R  E   R+ +    D      +       ++  +  Y   KQE 
Sbjct: 16  LDLLKQRLGWETAQHRLEEFNARVEDPNLWDNPEAAQKLMRDRQSLVDALESYTSLKQEL 75

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +D   +I     + +   +A  E             +     L     D     LEI+AG
Sbjct: 76  EDQVELIELGEMEEDAEVVADAEAALKALVET--SAKKELEALLDGETDGNDAFLEIKAG 133

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+EA  +   L RMY R+A  R ++V++       + G K     I G+  +  +K E
Sbjct: 134 AGGTEACDWANMLARMYVRWAEKRGFEVDLQEEQAGAEAGIKSATYQIKGKNAYGWLKSE 193

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           SG HR+ R+      G   TS A V   P     I+V +   DIRIDT R+SG+GGQHVN
Sbjct: 194 SGTHRLVRISPFGK-GTRETSFAAVGAYPVIDDNIEVTVNPADIRIDTFRSSGAGGQHVN 252

Query: 239 TTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TTDSAVRITH PTGI+VTSSEKSQHQNR  AMK L++RLY +E  R   E +A  + + G
Sbjct: 253 TTDSAVRITHHPTGIVVTSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEAK-G 311

Query: 299 SGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
                 +IR+Y     + + D R        + VL G +D  +   L 
Sbjct: 312 DAGWGNQIRSYVLQPYQMVKDLRTQYETADTQGVLDGDLDPFMEATLA 359


>gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)]
 gi|256787399|ref|ZP_05525830.1| peptide chain release factor 2 [Streptomyces lividans TK24]
 gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24]
 gi|19864260|sp|Q53915|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)]
 gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24]
          Length = 368

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 165/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEALRGRIDDLGVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+ A+ K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAESELAAVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K EV  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V +LP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G     
Sbjct: 261 RLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRKQR 366


>gi|302334951|ref|YP_003800158.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM
           7084]
 gi|301318791|gb|ADK67278.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM
           7084]
          Length = 370

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 112/369 (30%), Positives = 166/369 (44%), Gaps = 31/369 (8%)

Query: 2   VFLSHKQICDLKNRFA----------------EIELRMSESPSVDAYIKLTEEYAAISPI 45
           + +S   I  L  R                  E+E R +     D     +     ++  
Sbjct: 1   MDVSKADIEALARRLDEVESYLHIDERRRVVAELEERSARPGFWDDADAASRSMTELTRA 60

Query: 46  ISKISIYDQKKQEEQDLHTVIG--DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
              +   +  +    D    +       D ++ D A     A+E E+     E+      
Sbjct: 61  KEDVQGIEDARTRLGDASAALELGLETGDGDLLDEAARICGALEDEL----GELELSSWF 116

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            D  D    I+ +  G GG EA  +   LF+MY RY   R WKV V  +   +  G    
Sbjct: 117 ADDLDHGDAIVTVTPGQGGLEAQDWCDMLFKMYLRYCDRRGWKVTVNDAPAAEAIGIDRA 176

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDI 222
             T+SG+  +  ++ E GVHR+ R+  T+   R  T+ A V VLP    +++VDI   D+
Sbjct: 177 TFTVSGKNAYGMLRAEQGVHRLVRISPTDDKKRRQTTFAGVEVLPVLPDDVEVDIDPGDL 236

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
           RID   ASG GGQ VNTTDSAVRITH+PTG +V   +E+SQ QN+  AM +LR+RLY++E
Sbjct: 237 RIDVYHASGHGGQGVNTTDSAVRITHLPTGTVVTCQNERSQIQNKAIAMGILRSRLYELE 296

Query: 282 RKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVL-QGYID 337
             +   E    R  K +IG G+   +IR+Y     + + D R  +    +E VL  G +D
Sbjct: 297 LAKREAEIDELRGPKHEIGFGN---QIRSYVLYPYQLVKDLRTGVETGNVESVLDDGDLD 353

Query: 338 DIINPLLTA 346
             I      
Sbjct: 354 KFIVGYHRW 362


>gi|239981919|ref|ZP_04704443.1| peptide chain release factor 2 [Streptomyces albus J1074]
          Length = 355

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 167/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 9   DLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRSRLDDLGVLFE 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D++ R  A+ E+ ++ K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 69  LAEAEDDADTRAEAESELASVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R +K EV  +S  ++ G K     +     +  +  E G HR+
Sbjct: 125 ADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQGTHRL 184

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 185 VRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 244

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G     
Sbjct: 245 RLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 302

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 303 NQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRKQR 350


>gi|254422250|ref|ZP_05035968.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
 gi|196189739|gb|EDX84703.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
          Length = 345

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 164/345 (47%), Gaps = 6/345 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +  +  ++E   ++    D      +    ++   + +   +      +D   ++     
Sbjct: 1   MNAKIKDLEQLSAQPDFWDEQESAQKSLQELNDYKANLDQVEGWSTSLEDSEAILELL-- 58

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D E  +   +E  +    + +  ++     L     D    +L I AG GG++A  +   
Sbjct: 59  DLEQDESLLLEAESTVNRLSKELDQWELQQLLSGPYDKAGAVLTINAGAGGTDAQDWSEM 118

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R++    ++ +++  S+ D+ G K +   + GR  +  +K E G HR+ R+   
Sbjct: 119 LLRMYTRWSEQNGYQFKLIEKSEGDEAGLKSVTMEVYGRYAYGYLKGEKGTHRLVRISPF 178

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+G+  TS A V V+P    ++++DIP +D+ I T R+ G+GGQ+VN  ++AVRITH+P
Sbjct: 179 NANGKRQTSFAGVEVMPILDQKVELDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHLP 238

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           T I V  + E+SQ QN+ +AM +L ++L  + +++     +  R   +       +IR Y
Sbjct: 239 TSISVRCTQERSQLQNKEKAMALLTSKLLVIAQEQRTQAIADIRGDMVE-AAWGNQIRNY 297

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
            F   + + D R ++    ++ V+ G ++  I   L      ++ 
Sbjct: 298 VFHPYQMVKDLRTSVETTAVDDVMNGDLEAFIQAYLHQENQLILE 342


>gi|78044242|ref|YP_359035.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996357|gb|ABB15256.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 371

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 110/350 (31%), Positives = 180/350 (51%), Gaps = 11/350 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I   K    ++  +  E    D Y +  +    ++ +   I  Y++  + ++  
Sbjct: 19  MRVSLDIPGKKELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEELLKAQE-- 76

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              +     + E  +   +E     K++ E  + +   LL     D  S I+ + AG GG
Sbjct: 77  ELTVLLQLLEEEENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSLHAGAGG 136

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +V  L+RMY R+A  + +KVE++     ++ G K +  ++ G G +  +K E GV
Sbjct: 137 TEAQDWVEMLYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYLKAERGV 196

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           HR+ R+   + SGR HTS A+V VLPE      ++++  E+++I+T R+ G+GGQHVN T
Sbjct: 197 HRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGGQHVNKT 256

Query: 241 DSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--I 297
           +SAVRITH+PTG  +V  +E+SQ  NR  A K+L+A+L D+E K+   E +  R  Q  I
Sbjct: 257 ESAVRITHLPTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLRGEQKEI 316

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             G    +IRTY F     + DHR  + +  ++ V+ G ID  I   L  
Sbjct: 317 AWG---SQIRTYVFHPYSLVKDHRTGVEVGDVQGVMDGEIDIFIEAYLKM 363


>gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191]
 gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191]
          Length = 371

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 175/343 (51%), Gaps = 12/343 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL---HT 64
           ++ + K + A++E  +S+    +      +       + +++  +   ++E  D    + 
Sbjct: 28  RVGEKKEKLAKLEAEISKESFWNDSDNARQVSKEADAVKTELETFSALQKEMDDAVTYYE 87

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + NS++E+ +++   +    +        I + +   D  D  + I+ I AG GG+E
Sbjct: 88  MALEENSETEMGEISSFLIKIENELKE-----IEFKIKLSDPADRLNAIMHIHAGAGGTE 142

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A     KV++      ++ G K +   I G   +  +K E+GVHR
Sbjct: 143 SCDWAQMLLRMYTRWAENHGLKVKITDILPGEEAGVKSVSLMIEGLYAYGYLKSENGVHR 202

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+ R HTS A+  VLP    EI ++I  +D+ +DT R+ G+GGQ+VN  ++A
Sbjct: 203 LVRISPFDANSRRHTSFASCDVLPDIEDEIKIEIEEKDLEVDTFRSGGAGGQNVNKVETA 262

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI HIPTGI+V    E+SQ QNR  AMK+LRA+LY +E  +  +E       Q G    
Sbjct: 263 VRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQIEADKKRSEM-EKHYGQKGDIAW 321

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
             +IR+Y F   + + D R      +++ V+ G +D  +   L
Sbjct: 322 GHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFMQSYL 364


>gi|325963891|ref|YP_004241797.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469978|gb|ADX73663.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 371

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 99/350 (28%), Positives = 162/350 (46%), Gaps = 7/350 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK   AE+  R  E    D      +  + +S   S++   +       DL  ++ 
Sbjct: 25  DVEALKEDIAELSERAGEPDLWDDPSAAQKITSRLSHRQSELERLNNLASRIDDLEVLVE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   + +        +    E     + L     D++  ++ IRAG GG +AA 
Sbjct: 85  LGQDEDDAASMGEAAAELESIKKALKEL--EVVTLLSGEYDEREAVVSIRAGAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +   V+ +S  ++ G K     +     +  +  E+G HR+ R
Sbjct: 143 FAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLSVEAGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P       ++IP  +IR+D  R+SG GGQ VNTTDSAVR+
Sbjct: 203 ISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRL 262

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG +V+  +EKSQ QNR  AM+VL++RL  +++++   E+ A       S    ++
Sbjct: 263 THIPTGTVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGDVKAS--WGDQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +R+Y  +  + + D R    +     V  G IDD I+  +          
Sbjct: 321 MRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWRTDNRNAE 370


>gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
           33331]
          Length = 368

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 95/345 (27%), Positives = 157/345 (45%), Gaps = 7/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDALRVDIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETLRGRIDDLEVLFE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   LA+ E           E  +    L     D +  ++ IRA  GG +AA 
Sbjct: 85  LAEDEGDADALAEAESELESVRKALDE--MEVRTLLSGEYDAREALVTIRAEAGGVDAAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +K EV  ++  ++ G K     +     +  +  E G HR+ R
Sbjct: 143 FAEKLQRMYLRWAERHNYKTEVYETAYAEEAGIKSTTFAVEVPYAYGTLSVEQGTHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V VLP       V+I   ++R+D  R+SG GGQ VNTTDSAVR+
Sbjct: 203 ISPFDNQGRRQTSFAGVEVLPVVEQTDHVEIDESELRVDVYRSSGPGGQGVNTTDSAVRL 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    + +A +    G      +
Sbjct: 263 THLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD--GGNSWGNQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +R+Y     + + D R    +   E V  G ID  +   +   + 
Sbjct: 321 MRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRKQ 365


>gi|229815728|ref|ZP_04446053.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM
           13280]
 gi|229808644|gb|EEP44421.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM
           13280]
          Length = 377

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 167/351 (47%), Gaps = 12/351 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I + + R  E+E   +     D         A ++ +   +++ D  ++   D    +  
Sbjct: 30  IDEARGRVGELEQASAAPGFWDDADAARAHMAELAQVKGDVALVDGARERLSDARAALEL 89

Query: 69  HNSDSEIRDLAQIEVLAIEKEI-RELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                E      +              +E+          D  S IL I+ G GG EA  
Sbjct: 90  AEEMGEEGGAEFVAEATEAAAELTHSIDEMELSSWFTGEFDHGSAILSIKPGQGGLEAQD 149

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   LF+MY +Y A R WKV V      +  G      T+ G+  F  ++ E+GVHR+ R
Sbjct: 150 WTFMLFKMYMKYCARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGMLRAEAGVHRLVR 209

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +  T+A  R  T+ A V V+P    +I +++  +DIR+D   ASG GGQ VNTTDSAVR+
Sbjct: 210 ISPTDAKKRRQTTFAGVEVIPVLPDDIQIEVAPDDIRVDVYHASGPGGQGVNTTDSAVRV 269

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPTGI+V   +E+SQ QN+   M++L+ARLY++E ++  +     R  K +IG G+  
Sbjct: 270 THIPTGIVVTCQNERSQIQNKAACMQILKARLYELELQKREDTLDEIRGPKTEIGFGN-- 327

Query: 304 ERIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTA--HQAK 350
            +IR+Y  +    + D R  +    ++ VL  G +D  I         QA+
Sbjct: 328 -QIRSYVLYPYQMVKDLRCGVETSNVDGVLEDGDLDPFIIGYHRWATEQAE 377


>gi|317506166|ref|ZP_07963987.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255511|gb|EFV14760.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 354

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 214/354 (60%), Gaps = 19/354 (5%)

Query: 9   ICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + +L   +  ++ R ++      V A  K+ +  A ++PI    +  +  + +    H +
Sbjct: 5   LDELIAEYESLQERWADPSLQEDVAAAKKVGKRVAELAPIYEAHAQREAAQADLAAAHEL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                      + A+ EV  +   I EL+ E++ LL P+D  D +  +LE++AG GG E+
Sbjct: 65  AELD------PEFAKEEVERLTGRISELDEELDELLAPRDPHDGEDVVLEVKAGAGGEES 118

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG--------RGVFSRMK 177
           ALF GDL RMY ++A  R+W+VEVLS +++D GG K+   +I          +GV++ +K
Sbjct: 119 ALFAGDLIRMYTKFAERRRWRVEVLSIAESDLGGVKDATISIKRTGGDQSPAQGVWAWLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQH 236
            E GVHRVQRVPATE+ GR+HTSAA V   PE  +  +V I   ++RID  R+SG GGQ 
Sbjct: 179 HEGGVHRVQRVPATESQGRIHTSAAGVLAYPEPEDAPEVVIDESELRIDVYRSSGKGGQG 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG++V   +E+SQ QN+ RAM VL ARL  +  ++ A + ++ RK 
Sbjct: 239 VNTTDSAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARLEQLREEKAAADAASGRKE 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           QI + DRSERIRTYNF + RI DHRI      L+ VL+G ++ +++ L    +A
Sbjct: 299 QIRTVDRSERIRTYNFPENRIADHRIGYKASNLDMVLEGDLEPMLSELRLKLKA 352


>gi|125543555|gb|EAY89694.1| hypothetical protein OsI_11230 [Oryza sativa Indica Group]
          Length = 468

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 17/343 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  R  ++ + +      D  +   K++ E+  +   I  ++ ++Q+  E  D+  +  +
Sbjct: 127 ILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDMLRLARE 186

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + +    +  +                     L    +D  SC +E++AG GG+E+  +
Sbjct: 187 EDDNELETETMRALAEMRRSAKE-----KELNALLSGDNDSCSCFIEVQAGAGGTESMDW 241

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              +  MY  +A  R + V ++     +  G K     + G   F   K E GVHR+ R+
Sbjct: 242 AAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 301

Query: 189 PATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
              ++  R HTS A VAV+P          I   D+RI+  R+ G GGQH N T+SAVRI
Sbjct: 302 SPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRI 361

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
            HIPTGI     +E+SQH N+  AM VL++RL  +E  R A   + + +   +I  G+  
Sbjct: 362 VHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGN-- 419

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y     R + D R N  +   + VL G +DD I   L+
Sbjct: 420 -QIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 461


>gi|154175392|ref|YP_001408592.1| peptide chain release factor 2 [Campylobacter curvus 525.92]
 gi|112803979|gb|EAU01323.1| peptide chain release factor 2 [Campylobacter curvus 525.92]
          Length = 372

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 186/346 (53%), Gaps = 14/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K R  EIE    E        K   L +E   IS +++K +       + ++L+ + 
Sbjct: 31  QSIKERLQEIERLEHEPDFWQDIAKAGALNKEKTKISNMLAKFTNAKAAVDDAKELYELA 90

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              + +          +     E+      +   +L    DD+K+ I+ I  G GG+E+ 
Sbjct: 91  NSESDEE-----TLNSLFDDATELENKITALEISMLLSGEDDNKNAIISIHPGAGGTESN 145

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+     +KVE L   + D+ G K++   + G   +  +K E+G+HR+ 
Sbjct: 146 DWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYLKAENGIHRLV 205

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++GR HTS ++V V P    +I+++I  +D++IDT RASG+GGQHVN T+SA+R
Sbjct: 206 RTSPFDSAGRRHTSFSSVMVSPEIDDDIEIEIEEKDLKIDTYRASGAGGQHVNKTESAIR 265

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH+PTGI+V   +++SQH+NR  AMK+L++RLY++E  +     ++  K +IG G    
Sbjct: 266 ITHMPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVEKSEIGWG---H 322

Query: 305 RIRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +IR+Y  F   ++ D+R      + + +L G I  +I  +L + ++
Sbjct: 323 QIRSYVLFPYQQVKDNRSGQAFSQTDAILDGDIKKMIEGVLISQKS 368


>gi|310766541|gb|ADP11491.1| peptide chain release factor 2 [Erwinia sp. Ejp617]
          Length = 300

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 100/305 (32%), Positives = 160/305 (52%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  +    Q  ++   L  +  +   +    +         +K        + +  +   
Sbjct: 2   VETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVAELDGLDKKLGE-----LEFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C ++I+AG+GG+EA  +   L RMY R+A  + +K E++  SD +  G K    
Sbjct: 57  EYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
            I G   F  ++ E+GVHR+ R    ++ GR HTS ++V + PE    ID++I   D+RI
Sbjct: 117 KIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRI 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVN T+SAVRITH+PT I+V   +++SQH+N+ +A K LRA+LY+ E +
Sbjct: 177 DVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQ 236

Query: 284 RMANER--SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   ++  + + K  IG G    +IR+Y     RI D R ++     + VL G +D  I 
Sbjct: 237 KKNADKQTAEDNKSDIGWG---SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIE 293

Query: 342 PLLTA 346
             L A
Sbjct: 294 ASLKA 298


>gi|15892291|ref|NP_360005.1| peptide chain release factor 2 [Rickettsia conorii str. Malish 7]
 gi|24638155|sp|Q92IQ2|RF2_RICCN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|15619432|gb|AAL02906.1| peptide chain release factor RF-2 [Rickettsia conorii str. Malish
           7]
          Length = 368

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 10/339 (2%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            R   +E   ++    +      +     S +  K++ +++ K   +D   +     +++
Sbjct: 30  ERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAEN 89

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           ++  L+Q  +    K +  +  +     L     D  +C LEI AG GG+E+  +   + 
Sbjct: 90  DLETLSQ--IEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMM 147

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A    +K E+++  + ++ G K     I G+  +   K E+GVHR+ R+    A
Sbjct: 148 RMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTETGVHRLVRISPFNA 207

Query: 194 SGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           +G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAVRITHIPTG
Sbjct: 208 AGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTG 267

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
            +    S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G    +IR+Y
Sbjct: 268 TVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWG---HQIRSY 324

Query: 310 NFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
                  + D R +      + VL G +++ ++  L  +
Sbjct: 325 VLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSAHLAMN 363


>gi|301029486|ref|ZP_07192568.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1]
 gi|299877629|gb|EFI85840.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1]
          Length = 219

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 124/217 (57%), Positives = 169/217 (77%), Gaps = 2/217 (0%)

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HRVQRVPATE+ GR+HTSA 
Sbjct: 1   RRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSAC 60

Query: 203 TVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA+RITH+PTGI+V    E+
Sbjct: 61  TVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 120

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR 320
           SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDRS+R RTYNF QGR+TDHR
Sbjct: 121 SQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHR 180

Query: 321 INLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           INLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 181 INLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 217


>gi|209527406|ref|ZP_03275912.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
 gi|209492141|gb|EDZ92490.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
          Length = 339

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 154/337 (45%), Gaps = 13/337 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
           E   ++    D   +  +     + +  ++ +   + +  ++   +  ++   + +S  +
Sbjct: 2   EQLAAQPNFWDDQTQAQKTLQTLSDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQ 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           +     V       R          L     D    +L I AG GG++A  +   L RMY
Sbjct: 62  EAESNVVHLGRDIDRW-----ELQQLLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+   + +KV +   S+ D+ G K     + G   +  +K E G HR+ R+    A+G+
Sbjct: 117 TRWGEAQGYKVHLAEISEGDEAGIKSATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGK 176

Query: 197 VHTSAATVAVLPEAAE--IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
             TS A V ++P   E  I++DIP +D+ I T RA G GGQ+VN  ++AVRI HIPTGI 
Sbjct: 177 RQTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIA 236

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V  + E+SQ QNR +AM +L+A+L  V +++ A   +  R   +       +IR Y F  
Sbjct: 237 VRCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEIRGDLVE-AAWGNQIRNYVFHP 295

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            + + D R       +  V+ G +D  I   L     
Sbjct: 296 YQMVKDLRTGEETTAINDVMNGELDGFIQAYLRQENQ 332


>gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor]
          Length = 368

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 165/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D      +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEALRGRIDDLGVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+ A+ K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAESELAAVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K EV  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V +LP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTGI+V   +E+SQ QN+  AM VL+A+L +  R+    +  A +    G     
Sbjct: 261 RLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            R+R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 319 NRVRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRKQR 366


>gi|257060501|ref|YP_003138389.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
 gi|256590667|gb|ACV01554.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
          Length = 375

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 92/344 (26%), Positives = 161/344 (46%), Gaps = 7/344 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L     ++E   ++    D      +    ++ + S +  Y Q   + +DL  +  
Sbjct: 35  DLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQWMGQLEDLKAIAE 94

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +     + E    +       +      L     D K  +L I AG GG++A  
Sbjct: 95  LLELEEDATLNEEAEANLTQLNHEL--DRWELQRLLSGIYDSKGAVLTINAGAGGTDAQD 152

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+   + +KV +   S+ D+ G K     I GR  +  +K E G HR+ R
Sbjct: 153 WAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVR 212

Query: 188 VPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +    A+G+  TS A + V+P  E  ++ V+IP +D+ I T R+ G GGQ+VN  ++AVR
Sbjct: 213 ISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGGQNVNKVETAVR 272

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + H+PTGI V  + E+SQ QN+ +A+ +L+A+L  + +++ A   +  R   +       
Sbjct: 273 VVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIRGDMVE-AAWGN 331

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR Y F   + + D R N     +  V+ G +D  I   L ++
Sbjct: 332 QIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLRSN 375


>gi|188534903|ref|YP_001908700.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
           Et1/99]
 gi|188029945|emb|CAO97829.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
           Et1/99]
          Length = 300

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 100/305 (32%), Positives = 160/305 (52%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  +    Q  ++   L  +  +   +    +         +K        + +  +   
Sbjct: 2   VDTLDQMTQGLEDVSGLLELAVEAEDEETFNEAVAELDGLDKKLAE-----LEFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C ++I+AG+GG+EA  +   L RMY R+A  + +K E++  SD +  G K    
Sbjct: 57  EYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
            I G   F  ++ E+GVHR+ R    ++ GR HTS ++V + PE    ID++I   D+RI
Sbjct: 117 KIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRI 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVN T+SAVRITH+PT I+V   +++SQH+N+ +A K LRA+LY+ E +
Sbjct: 177 DVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQ 236

Query: 284 RMANER--SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   ++  + + K  IG G    +IR+Y     RI D R ++     + VL G +D  I 
Sbjct: 237 KKNADKQTAEDNKSDIGWG---SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIE 293

Query: 342 PLLTA 346
             L A
Sbjct: 294 ASLKA 298


>gi|115452569|ref|NP_001049885.1| Os03g0305700 [Oryza sativa Japonica Group]
 gi|108707729|gb|ABF95524.1| peptide chain release factor 2 family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113548356|dbj|BAF11799.1| Os03g0305700 [Oryza sativa Japonica Group]
 gi|215707188|dbj|BAG93648.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 468

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 17/343 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  R  ++ + +      D  +   K++ E+  +   I  ++ ++Q+  E  D+  +  +
Sbjct: 127 ILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDMLRLARE 186

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + +    +  +                     L    +D  SC +E++AG GG+E+  +
Sbjct: 187 EDDNELETETMRALAEMRRSAKE-----KELNALLSGDNDSCSCFIEVQAGAGGTESMDW 241

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              +  MY  +A  R + V ++     +  G K     + G   F   K E GVHR+ R+
Sbjct: 242 AAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 301

Query: 189 PATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
              ++  R HTS A VAV+P          I   D+RI+  R+ G GGQH N T+SAVRI
Sbjct: 302 SPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRI 361

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
            HIPTGI     +E+SQH N+  AM VL++RL  +E  R A   + + +   +I  G+  
Sbjct: 362 VHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGN-- 419

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y     R + D R N  +   + VL G +DD I   L+
Sbjct: 420 -QIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 461


>gi|157363562|ref|YP_001470329.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
 gi|166977374|sp|A8F531|RF2_THELT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157314166|gb|ABV33265.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
          Length = 367

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 113/336 (33%), Positives = 170/336 (50%), Gaps = 8/336 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L     ++E  MS+        K  E    +  I   +S   + ++  +D+   I   
Sbjct: 27  DKLNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISEIERNFEDIDVGIELS 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D  I       +  I +E+ +        L+  D  D  +  L I  G GG+E+  + 
Sbjct: 87  EEDPGIAQD----IEKIVQEVEKNIRRFQLELILNDPLDQNNAYLSIHPGAGGTESHDWA 142

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + + VE+L     ++ G K     + G   +  +K E GVHR+ R+ 
Sbjct: 143 QMLLRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYLKHERGVHRLVRIS 202

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ R HTS A+V V+PE + +IDV+I  EDIRIDT RASG GGQ+VN TDSAVRITH
Sbjct: 203 PFDAAKRRHTSFASVNVVPEISDDIDVEIKPEDIRIDTFRASGHGGQYVNRTDSAVRITH 262

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   SE+SQHQN+  AMKVL+A+LY +E  +   +     + ++       +IR
Sbjct: 263 LPTGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEI-QGELKEISWGNQIR 321

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINP 342
           +Y       + DHR ++     + VL G +D  I  
Sbjct: 322 SYILQPYTLVKDHRTDIETGNFDAVLDGELDQFIEA 357


>gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
 gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
          Length = 329

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 106/329 (32%), Positives = 174/329 (52%), Gaps = 6/329 (1%)

Query: 22  RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           +M E    D   +  E  +    +  K+ +Y++ +    D   +      + ++ D    
Sbjct: 2   KMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEEEEDVSD--CK 59

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
           ++L+  ++I  + +++   +L     D  + IL +  G GG++A  +   L RMY R+A 
Sbjct: 60  DILSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYTRWAE 119

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
              +KVE L     DD G K +   I G   +  +K E G+HR+ R+    A+G+  TS 
Sbjct: 120 KSGYKVETLDILPADDAGIKSVSLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 179

Query: 202 ATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V VLPE   + D+DI  ED+R+DT R+SG+GGQHVN T+SAVRITHIPTGI+V   +E
Sbjct: 180 ASVEVLPELTKDQDIDIRPEDLRVDTYRSSGAGGQHVNKTESAVRITHIPTGIVVQCQNE 239

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITD 318
           +SQH NR  AM +L+++L +++ +R   E+  +   ++       +IR+Y F     + D
Sbjct: 240 RSQHYNRETAMLMLKSKLVELK-ERAHKEKIEDLAGELKDMGWGSQIRSYVFHPYTLVKD 298

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           HR  +    +  V+ G ID+ I   L   
Sbjct: 299 HRTGVENGNVSSVMDGEIDNFILAYLRQQ 327


>gi|120555185|ref|YP_959536.1| peptide chain release factor 2 [Marinobacter aquaeolei VT8]
 gi|120325034|gb|ABM19349.1| bacterial peptide chain release factor 2 (bRF-2) [Marinobacter
           aquaeolei VT8]
          Length = 310

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 97/316 (30%), Positives = 166/316 (52%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E + +  I+  I        + + L  +  + + +  ++++        ++  +   
Sbjct: 1   MGKERSDLELIVKTIDNLTNGLADAESLLDMAVEEDDEGTVQEIEADLENLDKELEK--- 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
             + +  +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +K E++   +
Sbjct: 58  --LEFRRMFSGEMDANNAYLDIQAGSGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQE 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            +  G K     I G   +  ++ E+GVHR+ R    ++  R HTS ++V V PE     
Sbjct: 116 GEVAGIKSATIHIQGDYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSF 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +++I   D+R+D  RASG+GGQHVN T+SAVR+TH PTGI+V   + +SQHQN+ +AMK 
Sbjct: 176 EIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANER--SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+L+++E ++   E+  + + K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLFELEMQKRNEEKQKAEDSKSDIGWG---SQIRSYVLDDSRIKDLRTKVETSNTQS 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G ID  I   L  
Sbjct: 293 VLDGDIDKFIEASLKM 308


>gi|289678406|ref|ZP_06499296.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 219

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 123/219 (56%), Positives = 161/219 (73%), Gaps = 2/219 (0%)

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             R  +VE+LS ++ + GGYKE++A + G  V+ ++KFESG HRVQRVP TE+ GR+HTS
Sbjct: 1   ERRGGRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTS 60

Query: 201 AATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
           A TVAVLPE  E   ++I   D+R+DT R+SG+GGQHVN TDSA+RITH+P+GI+V    
Sbjct: 61  ACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQE 120

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITD 318
           E+SQH+NR RAM  L A+L D +    AN  ++ RKL +GSGDRSERIRTYNF QGR+TD
Sbjct: 121 ERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGSGDRSERIRTYNFPQGRVTD 180

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           HR+NLTLY L+ VL G +D +I PLL  +QA  + +  E
Sbjct: 181 HRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 219


>gi|124515298|gb|EAY56808.1| Peptide chain release factor 2 [Leptospirillum rubarum]
          Length = 370

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 171/348 (49%), Gaps = 21/348 (6%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             LK    +I+ +          D   K+  E + +   +S I   +++  + + L  + 
Sbjct: 17  DRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQGIEKEDADIRALFELA 76

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               SD +        V    + ++  E       +  D   D    LEI  G GG+E+ 
Sbjct: 77  ----SDPDFLAELSRRVPEFSESVKAFEL----EEILSDAKSDNPAFLEIHPGAGGTESQ 128

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A      VEV+     ++ G K     + G   F  +  ESG+HR+ 
Sbjct: 129 DWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGYLMSESGIHRLV 188

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ R HTS  +V V PE   +I V+I  EDIRIDT RAS +GGQHVN T SA+R
Sbjct: 189 RISPFDANKRRHTSFTSVFVYPELEDDIPVEIRDEDIRIDTFRASSAGGQHVNKTSSAIR 248

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER----SANRKLQIGSG 300
           +TH+PTGI++ + +E+SQ QNR  A KVLRA+LY++E KR   E      A  K +IG G
Sbjct: 249 LTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKISGAQNKKEIGWG 308

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               +IR+Y     + I DHR  L   K+  VL G +D  I   L A 
Sbjct: 309 ---HQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353


>gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
 gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
          Length = 373

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 94/345 (27%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDL 62
           H  +   ++R A IE   +     D   K     +E + +   +       +   + Q L
Sbjct: 22  HLDLDRKRSRIALIERDSTLPTFWDDNTKAQALLKEKSTLEASVGAYDKVMRGLDDAQVL 81

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +  + N ++  ++            +     ++    +     D  SC ++I AG GG
Sbjct: 82  FELAVEANDEATTQEAEGS-----LTGLEGDVAKLELARMLSGEQDRSSCFMDINAGAGG 136

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +++  +   L RMY RY   + WKVE+      ++ G+K +   I G   +  +K E GV
Sbjct: 137 TDSMDWAAMLLRMYTRYCENKGWKVEINDEVPGEEAGFKNVSLRIEGDFAYGYLKAEVGV 196

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +A+ R  T+ A+V V PE    I +DIP +DI +  +R  G+GGQ VN T 
Sbjct: 197 HRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGGQKVNKTS 256

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR--MANERSANRKLQIG 298
           S  ++ H+PTGI++   +E+SQ  N+  A K+LR RLY++E K+   A + +  +K  I 
Sbjct: 257 STAQLRHLPTGIIITCQTERSQSANKDMAFKILRGRLYELEMKKREAARDAAEAQKKDIS 316

Query: 299 SGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
            G    +IR+Y  +  R + D R  +    ++ VL G +++ +  
Sbjct: 317 FG---SQIRSYVLAPYRMVKDLRTGIETGNVDAVLDGDLEEFVTS 358


>gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 368

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 165/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRIDDLAVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+  + K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAEAELADVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       VDI   D+R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V   +E+SQ QNR  AM VL+A+L +  R+    +  A +    G     
Sbjct: 261 RITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRKQQ 366


>gi|291287317|ref|YP_003504133.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884477|gb|ADD68177.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 371

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 172/345 (49%), Gaps = 17/345 (4%)

Query: 10  CDLKNRFAEIELR-MSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +LK   +E++   MS+    ++     L +E A     + +        ++ + L  + 
Sbjct: 27  DELKKAISEVDNLSMSDPNFWNSKESKVLMKEQAINKKKLEEWHELTGLLEDTEVLIELY 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +     E       ++    + + +        L+    +D  + I+ I +G GG+EA 
Sbjct: 87  KEGEQGVE------ADIETSIRTLEKTIAHFELKLVLSGQNDGNNAIITINSGAGGTEAN 140

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY  YA    +K ++L   + ++ G K     I G   +  +K E+GVHR+ 
Sbjct: 141 DWAAMLYRMYTHYAERNGYKCDILDYMEGEEAGIKNATINIKGAFTYGYLKGETGVHRLV 200

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS A V V+PE  +       E D+ IDT RASG+GGQHVNTTDSAVR
Sbjct: 201 RISPYDSANRRHTSFAAVFVMPEIEDDIEIDISEADLHIDTYRASGAGGQHVNTTDSAVR 260

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITH+PTG +V   SE+SQH+N+  AMK+L++RLY++E  +   E+      K +IG G+ 
Sbjct: 261 ITHVPTGTVVTCQSERSQHKNKAHAMKILKSRLYELEIDKKNEEKQKLESTKTEIGWGN- 319

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y       + D R       ++ V+ G +D  I   L  
Sbjct: 320 --QIRSYVMHPYKMVKDLRTRHETGNVDAVMDGNLDAFIRAYLLH 362


>gi|254577375|ref|XP_002494674.1| ZYRO0A07040p [Zygosaccharomyces rouxii]
 gi|238937563|emb|CAR25741.1| ZYRO0A07040p [Zygosaccharomyces rouxii]
          Length = 393

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 145/361 (40%), Positives = 205/361 (56%), Gaps = 15/361 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           K+         +++  +S+    D   +  + Y+ +S I S    Y +     + L  +I
Sbjct: 38  KKAHQSVQEIVQLDQALSKGDGFD--AETQKTYSRVSSIRSMYEEYQELLDNLKGLQEMI 95

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               +D  ++D A+ E      + R++ N +   LLP     +K+CILE+R G GG+EA 
Sbjct: 96  Q---TDPSLKDDAKSEFDNSLPQFRQVSNNLLRKLLPPHPFAEKACILELRPGVGGTEAM 152

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGVHRV 185
           +F  DL  MY  YA    WK  V++ ++N  G G  + + +I   G + ++K+ESGVHRV
Sbjct: 153 IFTQDLLNMYIGYAQYHHWKYHVIAQNENQSGNGLVDAILSIDEPGAYDKLKYESGVHRV 212

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVD-------IPLEDIRIDTMRASGSGGQHVN 238
           QR+PATE  GR HTS A V VLP+  E   D          ++IRID MRA G GGQHVN
Sbjct: 213 QRIPATETKGRTHTSTAAVIVLPQIVESVKDAEQSERSFRPDEIRIDVMRAGGKGGQHVN 272

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVRITH P+GI+V    E+SQH+N+ +A  VLRARL + ERK   N   A RK Q+
Sbjct: 273 TTDSAVRITHFPSGIVVAMQDERSQHKNKAKAFAVLRARLAERERKEKENSERAARKDQV 332

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
            + DRS++IRTYN+ Q RITDHR N TLY +E V  G  +D++I+ +      +   S  
Sbjct: 333 TTTDRSDKIRTYNYPQNRITDHRCNFTLYDIEGVTSGVKLDEVIDSMAARDFEERSKSLI 392

Query: 357 E 357
           E
Sbjct: 393 E 393


>gi|159027417|emb|CAO86901.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 330

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 91/324 (28%), Positives = 153/324 (47%), Gaps = 7/324 (2%)

Query: 26  SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLA 85
               D      +    ++   S +  Y    ++ +D   +I     +S+   L +     
Sbjct: 5   PTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLELESDRALLEEATDNI 64

Query: 86  IEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKW 145
              +     +      L     D K  +L I AG GG++A  +   L RMY R+A  + +
Sbjct: 65  THLQHDL--DRWELQQLLNGPYDPKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGY 122

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KV +   S+ D+ G K +   I+G   +  +K E G HR+ R+    A+G+  TS A V 
Sbjct: 123 KVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVE 182

Query: 206 VLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
           V+P      + V+IP +D+ I T R+ G GGQ+VN  ++AVR+ H+PTGI V  + E+SQ
Sbjct: 183 VMPILGDDVVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQ 242

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRI 321
            QN+ +A+ +L+A+L  + R++ A   +  R   +       +IR Y F   + + D R 
Sbjct: 243 LQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVE-AAWGNQIRNYVFHPYQLVKDLRS 301

Query: 322 NLTLYKLEYVLQGYIDDIINPLLT 345
           N+    +  V+ G +D  I   L 
Sbjct: 302 NVETTDVTGVMNGDLDSFIEAYLR 325


>gi|210620542|ref|ZP_03292090.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
 gi|210155256|gb|EEA86262.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
          Length = 349

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 9/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  LK +  E E  M      +      +       +   +  ++Q ++  +D+  +I 
Sbjct: 5   DIERLKEKIIENEQDMERQDFWEDNENAHKVLQENKKLCETVEKFEQLQKNLEDIEVLIE 64

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +  D+ +    +I +    ++      LL  + D   + I+ I AGTGG +A  
Sbjct: 65  LGLEEDDSEDIEKEVSDSINQLKDVIDEMTIQTLLSGEYDK-NNAIVSINAGTGGLDAQD 123

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  R +KV++L    + + G K  V  I G   +  +K E GVHR+ R
Sbjct: 124 WAQMLLRMYIRWAEGRDYKVKLLDLISDPEAGIKTAVMLIQGDNAYGYLKGEKGVHRIVR 183

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   + SG+ HTS A+V V+PE    I+V+I   D++IDT RASG+GGQHVNTTDSAVRI
Sbjct: 184 ISPFDPSGKRHTSFASVDVIPELDENIEVEINQSDLKIDTYRASGAGGQHVNTTDSAVRI 243

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRS 303
           TH+PTGI V   +E+SQH NR  AM++L A+L D++      +    +    QI  G   
Sbjct: 244 THLPTGITVQCQNERSQHLNREVAMRMLMAKLIDIKEMEQKEKIEDLQGKYTQITWG--- 300

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y F     + DHR N     ++ V+ G ID  IN  LT
Sbjct: 301 SQIRSYVFQPYKMVKDHRTNTETGNVDAVMNGNIDIFINSYLT 343


>gi|315586172|gb|ADU40553.1| peptide chain release factor RF2 [Helicobacter pylori 35A]
          Length = 385

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 49  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELA 108

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 109 QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 163

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 164 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 223

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 224 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 283

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 284 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 340

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 341 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 383


>gi|239930935|ref|ZP_04687888.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 352

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 165/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 9   DLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRIDDLAVLFE 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+  + K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 69  MAEEEDDPDTRAEAEAELADVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 125 ADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRL 184

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       VDI   D+R+D  R+SG GGQ VNTTDSAV
Sbjct: 185 VRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQGVNTTDSAV 244

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V   +E+SQ QNR  AM VL+A+L +  R+    +  A +    G     
Sbjct: 245 RITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGD--GGNSWG 302

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G ID  +   +   + +
Sbjct: 303 NQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRKQQ 350


>gi|313847717|emb|CBY16707.1| putative peptide chain release factor 2 [Chlamydophila psittaci
           RD1]
          Length = 368

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 171/346 (49%), Gaps = 11/346 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +   + +E +  +           +    I+ +  +IS Y++ K    +L   + 
Sbjct: 24  DLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIASLKRQISHYEEFKVRVDNLAFFLN 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D   D       + ++         + +E     L     D   C L I AG GG+E+  
Sbjct: 84  D--GDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGAGGTESCD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  LFRMY R+AA  +WKVEV+   + D  G K +    SG   +   K E GVHR+ R
Sbjct: 142 WVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAERGVHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ + HTS A+V V P    EI++DI   D+RIDT R+SG+GGQHVN TDSAVRI
Sbjct: 202 ISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNVTDSAVRI 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           THIPTGIMV    E+SQ QNR   MK+LRAR+Y    +    ++  +RK   +I  G   
Sbjct: 262 THIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKNKKEIAWG--- 318

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
            +IR Y F     + D R       ++ ++ G  +DD +   L  +
Sbjct: 319 SQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLAEY 364


>gi|91205413|ref|YP_537768.1| peptide chain release factor 2 [Rickettsia bellii RML369-C]
 gi|122425715|sp|Q1RIY5|RF2_RICBR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|91068957|gb|ABE04679.1| Peptide chain release factor RF-2 [Rickettsia bellii RML369-C]
          Length = 368

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 10/339 (2%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            R AE+E   +     +      +     S +  ++  Y++ +   +D   +     +++
Sbjct: 30  ARLAELEELAASPDLWNDQANAQKLLREKSNLEEQLGAYNKIRSNLKDALELEEMAEAEN 89

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           ++      +V    + +  +  +     L     D  +C LEI AG GG+E+  +   + 
Sbjct: 90  DLE--IMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEINAGAGGTESHDWASIMM 147

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A    +K E+++  + ++ G K     I GR  +  +K E+GVHR+ R+    A
Sbjct: 148 RMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWLKTEAGVHRLVRISPFNA 207

Query: 194 SGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           +G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAVRITHIPTG
Sbjct: 208 AGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTG 267

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
            +    S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G    +IR+Y
Sbjct: 268 TVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWG---HQIRSY 324

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
                + + D R +      + VL G +++ ++  L  +
Sbjct: 325 VLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAMN 363


>gi|294010764|ref|YP_003544224.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
 gi|292674094|dbj|BAI95612.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
          Length = 375

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 166/341 (48%), Gaps = 16/341 (4%)

Query: 14  NRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E+  R+ +    D      ++  E   +   I      D +K +  +L  +     
Sbjct: 30  RRLDELNARVEDPTLWDNQRQAQEVMRERTRLDAAIGATRAIDSEKTDTAELIEMAEAEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  + +         ++             L     D     LEI AG GG+E+  +  
Sbjct: 90  DEDMVNEAIASLKALADRADE-----DKIKALLAGEADASDTYLEIHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  R +KVE++     D  G K       G   +   K ESGVHR+ R+  
Sbjct: 145 MLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V P     I++++   D++IDT RASG+GGQHVNTTDSAVRITH+
Sbjct: 205 YDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQHVNTTDSAVRITHV 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           P+GI+V + +++SQH+NR  AM +L+ARLY+ E +R     S     K +IG G    +I
Sbjct: 265 PSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQAKTEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     + + D R  +T    + VL G +D  +   L+ 
Sbjct: 322 RSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQ 362


>gi|148560211|ref|YP_001258893.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
 gi|256369345|ref|YP_003106853.1| peptide chain release factor 2 [Brucella microti CCM 4915]
 gi|148371468|gb|ABQ61447.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
 gi|255999505|gb|ACU47904.1| peptide chain release factor 2 [Brucella microti CCM 4915]
          Length = 375

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 164/346 (47%), Gaps = 16/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +  R  +    +      KL  E   +   I+ I+   Q   +  +L  + 
Sbjct: 26  DQAVKRLGYLNQRAEDPTLWNDAQEAQKLMRERQQLEDSINGINHLKQTLNDSVELIAMG 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +    S + D  +      ++      +     +L     D     LE+ AG GG+E+ 
Sbjct: 86  EEEGDKSIVEDAEKTIRDLKDEI-----DRRQIDMLLSGEADANDTYLEVHAGAGGTESQ 140

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A     KVEV+   + ++ G K     + G   +  +K ESGVHR+ 
Sbjct: 141 DWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGMLKTESGVHRLV 200

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS A++ V P     I+V +   D+RIDT RASG+GGQHVNTTDSAVR
Sbjct: 201 RISPYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQHVNTTDSAVR 260

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           ITHI TGI+V   +E+SQH+NR +A  +LRARLY+ E K+      A    K  IG G  
Sbjct: 261 ITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANATKTDIGWG-- 318

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y     + + D R  +     + VL G +   +   L   
Sbjct: 319 -HQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 363


>gi|225872704|ref|YP_002754161.1| peptide chain release factor 2, programmed frameshift
           [Acidobacterium capsulatum ATCC 51196]
 gi|225792505|gb|ACO32595.1| peptide chain release factor 2, programmed frameshift
           [Acidobacterium capsulatum ATCC 51196]
          Length = 384

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 177/345 (51%), Gaps = 11/345 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L++  A IE ++++            L  +   I   ++  +   ++  +      +  +
Sbjct: 28  LRSELAAIETKLADPALWSNPQLSQPLMRDRKRIEEQLAYDTELARRSGDIDAYFELARE 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             +  E     + ++      + E   ++    +     D  + I+ +  G GG+E+  +
Sbjct: 88  SEAAGEADANLEADLSREISALGEYVEKLESRTMLSGETDALNAIVTVHPGAGGTESQDW 147

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A  + +K E+    D ++ G K    TI G   F ++  E+GVHR+ R+
Sbjct: 148 AEMLMRMYLRWAEQQGFKTEMNDYQDGEEAGIKSATFTIIGDYAFGQLSGETGVHRLVRI 207

Query: 189 PATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              + + R HTS A+V V PE  +   +DI  +++R DT R+ G GGQHVNTTDSAVRIT
Sbjct: 208 SPFDQAKRRHTSFASVFVSPEIDDSIQIDIKPDELRTDTYRSGGKGGQHVNTTDSAVRIT 267

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRSE 304
           HIPTGI+V   +E+SQH+NR +AMK+LR+RLY+ E  +   E  +  + KL I   +   
Sbjct: 268 HIPTGIVVQCQNERSQHKNREKAMKMLRSRLYEYELAKKQAETKKLEDSKLDI---NFGS 324

Query: 305 RIRTYNFSQGRI-TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +IR+Y     RI  DHR  + +  ++ VL GY+D  I   LT  +
Sbjct: 325 QIRSYVLQPYRIAKDHRTKVEVGDVDRVLDGYLDPFIRGYLTMRR 369


>gi|297571771|ref|YP_003697545.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932118|gb|ADH92926.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 376

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 13/353 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+ + A++  +       D   K     + +S   S++    +  +   DL T+  
Sbjct: 24  DVTALQTKIADLTEQSGAPDLWDDPEKAQGVTSQLSHAQSELDRVVKMGERVADLETLYD 83

Query: 66  --IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +  SD+ +      EV    + +R   +E+    L     D++  ++ IR+G GG 
Sbjct: 84  MAVEESESDAAMGAELFAEVDGELERVRTDLSELEIKTLLSGEYDERDAVVTIRSGAGGV 143

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA +   L RMY R+A  R +K +V+ +S  ++ G K     +S    +  +  E+G H
Sbjct: 144 DAADWAQMLQRMYLRWAERRGYKTKVMDTSYAEEAGIKSTTFEVSAPYAYGTLSVEAGTH 203

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +  GR  TS A V V+P       +DIP  +++ID  R+SG GGQ VNTTDS
Sbjct: 204 RLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIDIPESELKIDVFRSSGPGGQSVNTTDS 263

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS-- 299
           AVR+THIPTGI+V+   EKSQ QNR  A++VL++RL     ++   E +A +K   G   
Sbjct: 264 AVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLL----QKRHEEEAAIKKELAGDVK 319

Query: 300 GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           G   +++R+Y     + + D R    +   E V  G ID  I+  +     +M
Sbjct: 320 GAWGDQMRSYVLHPYQMVKDLRTGFEVGNTESVFDGDIDGFIDAGIRWRHGQM 372


>gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
 gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
          Length = 354

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 169/354 (47%), Gaps = 16/354 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M       +  +       E +M++    +   K  +  +  + +  K   + + +   +
Sbjct: 1   MTLGGLFDLDAIDESIEINENKMAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYE 60

Query: 61  D---LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           D      ++ +       +++        E       +     LL     D  + ++EI 
Sbjct: 61  DETTAVELLREEPDPDLQKEVEADLATLQEDF-----HNYELDLLLSGKYDSHNALMEIH 115

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
            G GG+EA  +   L RMY+RY     +K E+      ++ G K + A I G+  +  +K
Sbjct: 116 PGAGGTEAMDWGQMLLRMYQRYCDTAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLK 175

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
            E+GVHR+ R+   +A+ R HTS A+V V+PE    I +DI  +D+R+D  R+SG+GGQH
Sbjct: 176 SENGVHRLVRISPFDAAKRRHTSFASVEVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQH 235

Query: 237 VNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           +N T SAVRITH+PTGI+  + +++SQ QNR  AM  LRA+L+ +E ++   ++ A +  
Sbjct: 236 INKTSSAVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGD 295

Query: 296 Q--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Q  IG G    +IR+Y F     + D R        + V+ G +   I   L  
Sbjct: 296 QKEIGWG---SQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYLQW 346


>gi|78776561|ref|YP_392876.1| peptide chain release factor 2 [Sulfurimonas denitrificans DSM
           1251]
 gi|123550812|sp|Q30TP0|RF2_SULDN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|78497101|gb|ABB43641.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 365

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 177/345 (51%), Gaps = 14/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L  R A+I+   +     +         ++       + K ++      + ++L+ + 
Sbjct: 27  DKLYKRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNLAKNAIDDAKELYEMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N +  I +              +L   +   +L  +  D  + IL I  G GG+E+ 
Sbjct: 87  KEENDEDLIAECFNGAQHI-----EDLIRTMEIEVLLSEETDGNNAILSIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY+R+A  R W VEVL     D+ G K++   ISG   +  +K E+G+HR+ 
Sbjct: 142 DWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYLKVENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ + HTS ++V V PE  +     I   DIR+DT R+SG+GGQHVN T+SA+R
Sbjct: 202 RISPFDSNAKRHTSFSSVMVSPEVDDDINIVIEDRDIRVDTYRSSGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHI TG++V   +++SQH+NR  AMK+L++RLY++E +    E +   K +IG G    
Sbjct: 262 ITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELELENQKAEIAGIAKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +IR+Y      +I D R N+    +  +L G ID +I  +L +  
Sbjct: 319 QIRSYVMQPYQQIKDTRSNIAYSNVSAILDGDIDKMIEDVLISQN 363


>gi|190348057|gb|EDK40443.2| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 421

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 130/352 (36%), Positives = 198/352 (56%), Gaps = 14/352 (3%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
             ++ +E  +++        +    Y+ +S I+     Y Q  +    L  +I +  +D 
Sbjct: 69  KEYSVLEEAITKGNF---DQETNVRYSNLSVILDNYHRYVQDMENVAALKEMIAEE-TDP 124

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           E++  A  E+  +   ++     +   LLP  +  DK+ ILE+R G GGSEAALF GDL 
Sbjct: 125 EMQQEAIKELQHLVPNVQRSVKVLQARLLPPVSHSDKATILELRPGVGGSEAALFCGDLV 184

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
            MY  +A  +KWK   +S    + G   E++ +I   G ++ ++ ESGVHRVQR+PATE 
Sbjct: 185 NMYINFANNKKWKWTKISEGLTNSGSLNEVIMSIDVPGSYNLLRHESGVHRVQRIPATET 244

Query: 194 SGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
            GR+HTS A V VLP+          + +      ++RIDTMRA G GGQHVNTTDSAVR
Sbjct: 245 KGRIHTSTAAVVVLPKISEGTESSLKDDERQFAPGEVRIDTMRAGGKGGQHVNTTDSAVR 304

Query: 246 ITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI V   + +SQ +N+ +A  +LRARL  +ER +   E+   R  Q+ + DRS+
Sbjct: 305 LTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVTTTDRSD 364

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           +IRTYNF Q R+TDHR   +L+ ++  +QG  +++II  +        + + 
Sbjct: 365 KIRTYNFPQNRVTDHRCGFSLHDIDGCMQGYKLEEIIEHVEEKELEDRLEAL 416


>gi|189218067|ref|YP_001938709.1| protein chain release factor B [Methylacidiphilum infernorum V4]
 gi|189184925|gb|ACD82110.1| Protein chain release factor B [Methylacidiphilum infernorum V4]
          Length = 337

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 110/330 (33%), Positives = 170/330 (51%), Gaps = 16/330 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKK---QEEQDLHTVIGDHNSDSEIRDLA 79
           M+         K  +  +    + +K S Y       ++ + L+ ++ +    S  ++L 
Sbjct: 1   MASPSFWQTPEKAEKALSRSKELKAKFSDYKTLVNRFKDIEALYDLLQESEDPSLEKELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q           +L + I   L+  D  D K+ IL + +G GG+EA  +   L RMY+RY
Sbjct: 61  QE-----INAYSDLLDSIEVKLVLSDPMDQKNAILSVHSGAGGTEACDWAAMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    +KV ++     ++ G K     ISG   +  +K E GVHR+ R+    A G+  T
Sbjct: 116 AERHGFKVSLIDILPGEEAGIKSASLLISGSYAYGYLKAERGVHRLVRISPFNAQGKRQT 175

Query: 200 SAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTS 257
           S A+V V+      I+++I   D+RID  R+ G GGQ VNTTDSAVRITH+PTGI +V  
Sbjct: 176 SFASVDVVAEVDESIEIEIKESDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVVCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQG- 314
           +E+SQ QN+  AMK+LR+RLY++E+ +   E      +K +IG G    +IR+Y      
Sbjct: 236 NERSQIQNKATAMKILRSRLYELEKDKKRAEMERIYGQKGEIGWG---RQIRSYVLQPYK 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            + D R  +T  ++E VL G +D  I   L
Sbjct: 293 MVKDLRTGVTKTQVEEVLDGDLDSFIWAYL 322


>gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
 gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
          Length = 373

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 6/345 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +     ++   +     +   K  +    I  + +K+  + ++KQ   DL  +  
Sbjct: 26  DLESAERELDMLQAESAADGFWNNLEKAQKVQQRIKTLQTKVDKHHKRKQHWDDLMALCE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             N   +  +    E+      + E   E     L     D  + IL I  G GG+EA  
Sbjct: 86  MGNEFED--ESLVPELEEGYAALEEEMEEARLQTLLTGEYDSSNVILTIHPGAGGTEAQD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+     +  +++   D D+ G K     I G   +  ++ E GVHR+ R
Sbjct: 144 WAQMLYRMYTRWTERHGFTYQIMDYQDGDEAGIKSATIMIEGENAYGYLRGEHGVHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V   +A+ R  TS A+V V+P+   +++V+I  EDI +   RASG+GGQHVN T SAVR+
Sbjct: 204 VSPFDANARRQTSFASVEVMPDLPEDVEVEIRPEDIEMQVYRASGAGGQHVNKTSSAVRL 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H PTGI+V +  E+SQ QN+   MK+LRA+L +++ +  A + S  + +Q+   +   +
Sbjct: 264 IHKPTGIVVASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKGVQLK-IEWGSQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           IR+Y F   + + D+R       +  V+ G +D  IN  LTA   
Sbjct: 323 IRSYVFMPYQLVKDNRTAYETSNIGAVMDGELDGFINAYLTAEAT 367


>gi|32033623|ref|ZP_00133934.1| COG1186: Protein chain release factor B [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207810|ref|YP_001053035.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           L20]
 gi|126096602|gb|ABN73430.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 301

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 102/306 (33%), Positives = 159/306 (51%), Gaps = 12/306 (3%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           +++ I   DQ  ++ + L  +  +   +    +       A   E+ E   ++ +  +  
Sbjct: 2   VVNTIRTLDQGVEDVEGLIELAVEAEDEDTFNEAQ-----AEANELEEKLAKLEFQRMFS 56

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
              D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K   
Sbjct: 57  GQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSAT 116

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIR 223
             I+G   F  ++ E+G+HR+ R    +++ R HTS A   V PE  +         D+R
Sbjct: 117 VKITGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLR 176

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           ID  RASG+GGQHVN T+SAVRITHIP+GI+V   + +SQHQN+ + MK L+A+LY++E 
Sbjct: 177 IDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEM 236

Query: 283 KRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
            +   E+      K  IG G    +IR+Y     RI D R  +     + VL G +D  I
Sbjct: 237 MKKNAEKQAMEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFI 293

Query: 341 NPLLTA 346
              L A
Sbjct: 294 EASLKA 299


>gi|299066996|emb|CBJ38191.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum CMR15]
          Length = 300

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  ++  D+      +L  +  +   D  I  +                    +  +   
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAVETDTAGMRAIVEDM-----EFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++I+AG GG+EA  +   L R Y +Y   + +K EVL  S+ D  G K    
Sbjct: 57  PMDAANCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASL 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   F  ++ E+GVHR+ R    +++G  HTS +++ V PE  +  ++++   D+R+
Sbjct: 117 KVEGEYAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVRITHIPTGI+V   +++SQH+NR  AM +L++RLY+ E +
Sbjct: 177 DTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E       K  +G G    +IR+Y   Q RI D R N+ +   + VL G +D  I 
Sbjct: 237 KRQAEADKLEASKTDVGWG---HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDAFIE 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|301617313|ref|XP_002938091.1| PREDICTED: LOW QUALITY PROTEIN: peptide chain release factor 1,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 446

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 132/365 (36%), Positives = 203/365 (55%), Gaps = 11/365 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +    +  L      +   + ++    D     +  ++ +S +I  +    + +Q+ ++L
Sbjct: 74  IFQNYLQSLSKEHERLTEMLGQTSVREDDRRSASRRHSELSRLIGLLRDIKETEQDVREL 133

Query: 63  HTVIGDHNSDSE--IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG- 119
             +    N   E  +  LA  E   +++ I +L  ++   LLP +  D    +LE+ +G 
Sbjct: 134 ELMCAGKNXLEEGQMLALALEEKNTLKQNINKLRGKLLQALLPHEKYDMNDAVLEVTSGR 193

Query: 120 -TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
            TGG     F  ++F MY+ YA  + W  E+L+ S  + GG     A ISG GV+ R+K+
Sbjct: 194 TTGGDICQQFTKEIFDMYQNYAYYKSWSFEILNYSPAEYGGLHHAAARISGEGVYKRLKY 253

Query: 179 ESGVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           E G HRVQR+P    S R+   HT   TV VLP+  E++V I  +D+RIDT R+ G+GGQ
Sbjct: 254 EGGTHRVQRIPEVGLSSRMQRIHTGTMTVIVLPQPDEVEVKIDSKDLRIDTFRSKGAGGQ 313

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTTDSAVRI HIPTGI V    E+SQ  N+ +A+++LR RLY+   ++   ER + RK
Sbjct: 314 HVNTTDSAVRIVHIPTGIAVECQQERSQIANKEKALRILRMRLYEQTVEQELLERRSARK 373

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMI 352
           LQ+G+  +SERIRTYNF+Q R+TDHRI+  +  ++  L G   +DD+I  L  +   + I
Sbjct: 374 LQVGTRAQSERIRTYNFTQDRLTDHRIHYEVRNIKEFLNGEELLDDLIQKLQESADTEAI 433

Query: 353 GSASE 357
               E
Sbjct: 434 LELIE 438


>gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 375

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 106/340 (31%), Positives = 171/340 (50%), Gaps = 16/340 (4%)

Query: 14  NRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +R   +  + ++    D       +T++   +   +       ++  +  DL  +  +  
Sbjct: 33  DRLLSLIEKANDPKLWDSPDQAKNVTQKRNELQMKLDPWLGLKKELLDFPDLIELTSEEM 92

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +S ++ L        E         +  L      DD K+  + I  G GG+E+  +  
Sbjct: 93  GESGLKSLNDDFDRMFESF-----ENLQMLDALSGKDDGKAAFINIHPGAGGTESQDWAD 147

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  + ++ E++     +  G K     I G   F  +K ESGVHR+ R+  
Sbjct: 148 MLLRMYTRFAEQKGYRAELVDYQPGETAGIKNATLYIQGDHPFGYLKCESGVHRLVRISP 207

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS A+V V PE   +I V+I  +D+R+D  R+SG+GGQHVNTTDSAVRITHI
Sbjct: 208 FDSNKRRHTSFASVYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHI 267

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTG++V    E+SQ +NR  AMK+L+ARLY++E+++   E +     K  I  G    +I
Sbjct: 268 PTGVVVSCQMERSQIKNRDTAMKMLKARLYEMEKQKAEEENAKKAGEKRDIAWG---SQI 324

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y F     + DHR +     +  V+ G ++D I   L 
Sbjct: 325 RSYVFHPYNLVKDHRTDFETGNVHAVMDGDLEDFIIAYLK 364


>gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
 gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
          Length = 333

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 105/326 (32%), Positives = 169/326 (51%), Gaps = 13/326 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              DA  K+  E   ++  I  +   +   ++  +L  +  +   D+++       +  +
Sbjct: 3   NDSDAAQKMMRERTLLANQIEGVEALETNVRDTSELIELA-EAEGDADLVAEGMATLRDL 61

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
            +E +  E       L     D   C LE+ AG GG+EA  +   L RMY R+A    +K
Sbjct: 62  AEEAKRRET----ESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
           V ++ SS+ +  G K     +SG   +  +K E+GVHR+ R+   +A+ R  TS A+V V
Sbjct: 118 VTLMESSEGEQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWV 177

Query: 207 LP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            P     I+++I   D+++DT RASG+GGQHVN TDSA+RITH+PTGI+V   +++SQH+
Sbjct: 178 YPVIDDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHR 237

Query: 265 NRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRI 321
           NR  AM++LRARLY+ E ++       +   K  IG G    +IR+Y  +  + + D R 
Sbjct: 238 NRATAMQMLRARLYEAELQKREAEAAAAEAAKTDIGWG---HQIRSYVLAPYQMVKDLRT 294

Query: 322 NLTLYKLEYVLQGYIDDIINPLLTAH 347
            +     + VL G +D  +   L   
Sbjct: 295 GVETGNPDAVLDGDLDAFMAAALAMR 320


>gi|313683376|ref|YP_004061114.1| bacterial peptide chain release factor 2 (brf-2) [Sulfuricurvum
           kujiense DSM 16994]
 gi|313156236|gb|ADR34914.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfuricurvum
           kujiense DSM 16994]
          Length = 369

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 176/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            ++  R +EIE   +     +       + +E   +   ++K S       +  DL+ + 
Sbjct: 27  QEISARLSEIEALENSDGFWNDAAAAGVIQKEKTQLERRLAKYSKTFNTLGDAVDLYEMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +  I       + A    +      +   +L     D  + I+ I  G GG+E+ 
Sbjct: 87  KEEGDEETIES-----LFADAGSLENNVKSMEVEVLLSGEHDSHNAIVTIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    + VE+L     ++ G K+    I G  V+  +K E+G+HR+ 
Sbjct: 142 DWASMLLRMYTRWAERHDFTVEMLDYQAGEEAGIKDAALLIKGVNVYGYLKNENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ + HTS  +V V PE   +ID+DI   DIRIDT RASG+GGQHVN T+SA+R
Sbjct: 202 RISPYDSAAKRHTSFTSVMVSPELDDDIDIDIEDRDIRIDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+V   +++SQH+N+  A K+L++RLY++E ++         K + G G    
Sbjct: 262 ITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELEMEKKQAAVDGIEKSENGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R  +    +  +L G ID++I  +L A
Sbjct: 319 QIRSYVLAPYQQVKDTRSGIPYSNISNILDGDIDEMIEGVLIA 361


>gi|332673011|gb|AEE69828.1| peptide chain release factor RF2 [Helicobacter pylori 83]
          Length = 385

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 49  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELA 108

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 109 QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 163

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 164 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 223

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 224 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 283

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 284 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 340

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 341 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 383


>gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
 gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
          Length = 326

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 113/331 (34%), Positives = 184/331 (55%), Gaps = 13/331 (3%)

Query: 23  MSESPSVDAYIK----LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           MS++       +    L +E +A+S  I       +K ++   L  +  +    + + ++
Sbjct: 1   MSKADFWQRDQEEISRLNQERSALSEQIDTWEDLFRKTEDAALLAEMALEEKDKTTLSEV 60

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
            +       + +      +    L    DD ++ I+ I AG GG+EA  +V  LFRMY R
Sbjct: 61  TRD-----VERLEREIKRLELRSLLGKPDDRRNAIVAINAGAGGTEAQDWVEMLFRMYTR 115

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A  +  KVEV+     D+ G K +  T++G   +  +K E G+HR+ R+   +A+GR H
Sbjct: 116 WAEAKGMKVEVIDFLAGDEAGIKNVDFTVTGPYAYGYLKSEHGIHRMVRISPFDATGRRH 175

Query: 199 TSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V+VLPE   +I++++   D+RIDT RASG GGQHVN T SA+RITH+PT I+V  
Sbjct: 176 TSFASVSVLPEVDLDINIEVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPTKIVVQC 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR- 315
            +EKSQH+N+  AMKVL+++LY++E+ ++  ++      Q        +IR+Y F+  R 
Sbjct: 236 QNEKSQHRNKDMAMKVLKSKLYELEKNKLEQKKQEIHDTQ-KDIAWGSQIRSYVFNPYRM 294

Query: 316 ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + DHR NL    ++ V+ G ID+ I+  L  
Sbjct: 295 VKDHRTNLDDGNVDKVMDGDIDEFIDAYLRM 325


>gi|17545749|ref|NP_519151.1| peptide chain release factor 2 protein [Ralstonia solanacearum
           GMI1000]
 gi|17428043|emb|CAD14732.1| probable peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum GMI1000]
          Length = 300

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  ++  D+      +L  +  +   D  I  +                    +  +   
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAVEADTAGMRAIVEDM-----EFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++I+AG GG+EA  +   L R Y +Y   + +K EVL  S+ D  G K    
Sbjct: 57  PMDAANCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASL 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   F  ++ E+GVHR+ R    +++G  HTS +++ V PE  +  ++++   D+R+
Sbjct: 117 KVEGEYAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVRITHIPTGI+V   +++SQH+NR  AM +L++RLY+ E +
Sbjct: 177 DTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E       K  +G G    +IR+Y   Q RI D R N+ +   + VL G +D  I 
Sbjct: 237 KRQAEADKLEASKTDVGWG---HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDAFIE 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|34496516|ref|NP_900731.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
           12472]
 gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
           12472]
          Length = 299

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 105/302 (34%), Positives = 166/302 (54%), Gaps = 12/302 (3%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           +   +    + ++L  +      D  I  +      A  +E+     ++ +  +  D  D
Sbjct: 4   LDGINATIGDSRELFDMGKSEEDDDTILAVQ-----ADLEEVEAKVAQLEFRRMFHDPMD 58

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
             +C ++I+AG GG+EA  + G L RMY RYA  + +KV+VL  S+ +  G       I 
Sbjct: 59  PTNCFIDIQAGAGGTEAQDWAGMLLRMYTRYAERKGFKVDVLELSEGEVAGVTSATLKIE 118

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTM 227
           G   +  ++ E GVHR+ RV   +++ R HTS ++V V PE     ++DI   D+R DT 
Sbjct: 119 GEYAYGLLRTEVGVHRLVRVSPFDSNARRHTSFSSVFVYPEVDDSFEIDINPADVRTDTY 178

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH+NR  A ++LRA+LY++E K+  
Sbjct: 179 RASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWQMLRAKLYELELKKRN 238

Query: 287 NERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
             +    + K  +G G    +IR+Y F Q RI D R +  +  ++ V+ G +D  I   L
Sbjct: 239 EAKQALEDTKTDVGWG---HQIRSYVFDQSRIKDLRTSYEVGNIKGVMDGDLDGFIEASL 295

Query: 345 TA 346
             
Sbjct: 296 KH 297


>gi|317008842|gb|ADU79422.1| peptide chain release factor 2 [Helicobacter pylori India7]
          Length = 363

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 176/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +            + +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDINKEKVRLNRLLETYQKTKNALDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|261417352|ref|YP_003251035.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373808|gb|ACX76553.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 368

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 5/339 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +         +E    +    +   K       I  +   I  + +  Q   DL  +  
Sbjct: 25  DLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWKEVSQTCDDLAELY- 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           + + D E  DL       I      +E  + +  +    DD  +C++ I  G GG+E+  
Sbjct: 84  EMSKDEESADLTATLESDIADLKSRVEA-MEFKKMLNGPDDACACLMSIHPGAGGTESQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   LFRMY  +    K   +V+   + +D G K     +S    +  ++ E GVHR+ R
Sbjct: 143 WALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGLLRSEIGVHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           +   +A+ R HTS   V + PE  +++ D+ + ++R+DT R+SG+GGQ++N TDSAVR+T
Sbjct: 203 ISPFDANARRHTSFTAVYLYPEHEDVEFDLDMSEVRVDTYRSSGAGGQYINKTDSAVRMT 262

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGIM    +E+SQ QNR    K+L+  + +  R     +R A R  +    +   +I
Sbjct: 263 HLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRDA-RMAEKKKVEWGSQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           R+Y     + + D R  +       VL G I   I+  L
Sbjct: 322 RSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 360


>gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
 gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
          Length = 373

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 154/354 (43%), Gaps = 13/354 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI---ISKISIYDQKKQEEQDLHT 64
            +  ++   A +E + +     D      +  + +S +   + K      +  +   L  
Sbjct: 27  DLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGLRGRIDDLGVLFE 86

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D        +  Q      +              L     D +  ++ IRA  GG +
Sbjct: 87  LAADEGDADTQEEAEQELAAVRKALDEM-----EVRTLLSGEYDSREAVVTIRAEAGGVD 141

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+ F   L RMY R+A    +K E+  +S  ++ G K     +     +  +  E G HR
Sbjct: 142 ASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLSVEQGTHR 201

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSA
Sbjct: 202 LVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSA 261

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    + +A +    G    
Sbjct: 262 VRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD--GGNSW 319

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             ++R+Y     + + D R    +   E V  G ID  +   +   + +   SA
Sbjct: 320 GNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRKQQEQQSA 373


>gi|295982099|pdb|2X9R|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982158|pdb|2X9T|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
          Length = 351

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 15/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   + R  E+E R+ +    +      K+++E A +   +      +   Q   +L  
Sbjct: 13  DIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELME 72

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     ++   +L +      E   + L               +K+ IL I+ G GG+E
Sbjct: 73  ELPAEEREALKPELEEAAKKLDELYHQTL---------LNFPHAEKNAILTIQPGAGGTE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A  + ++VEV+  +   + G       + G   +  +  E+GVHR
Sbjct: 124 ACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGVHR 183

Query: 185 VQRVPATEASGRVHTSAA-TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +ASGR HTS A    +     E++V +  E++RID MRASG GGQ VNTTDSA
Sbjct: 184 LVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V   + +SQ +N+  A+K+L+ARLY++ERK+   E  A R  ++   + 
Sbjct: 244 VRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALR-GEVRPIEW 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y   +  + DHR  L  +  E VL G + D+I   L     + 
Sbjct: 303 GSQIRSYVLDKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWKAGRR 351


>gi|165975783|ref|YP_001651376.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875884|gb|ABY68932.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 301

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 12/306 (3%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           +++ I   DQ  ++ + L  +  +   +    +       A   E+ E   ++ +  +  
Sbjct: 2   VVNTIRALDQGVEDVEGLIELAVEAEDEDTFNEAQ-----AEANELEEKLAKLEFQRMFS 56

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
              D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K   
Sbjct: 57  GQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSAT 116

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIR 223
             I+G   F  ++ E+G+HR+ R    +++ R HTS A   V PE  +         D+R
Sbjct: 117 VKITGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLR 176

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           ID  RASG+GGQHVN T+SAVRITHIP+ I+V   + +SQHQN+ + MK L+A+LY++E 
Sbjct: 177 IDVYRASGAGGQHVNKTESAVRITHIPSSIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEM 236

Query: 283 KRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
            +   E+      K  IG G    +IR+Y     RI D R  +     + VL G +D  I
Sbjct: 237 MKKNAEKQAMEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFI 293

Query: 341 NPLLTA 346
              L A
Sbjct: 294 EASLKA 299


>gi|255037742|ref|YP_003088363.1| peptide chain release factor 2 [Dyadobacter fermentans DSM 18053]
 gi|254950498|gb|ACT95198.1| bacterial peptide chain release factor 2 (bRF- 2) [Dyadobacter
           fermentans DSM 18053]
          Length = 357

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 23/361 (6%)

Query: 4   LSHKQICDLKNRFA----------------EIELRMSESPSVDAYIKLTEEYAAISPIIS 47
           ++ +Q+ DLK R                  ++E +  +        +  +    I  +  
Sbjct: 1   MTAEQLKDLKARVEALGRYLDYANRKQQLGQLEQQTVQPEFWTDSARAEKVMKEIRGLKF 60

Query: 48  KISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
             + Y++  +   DL T+   + +D    +    E   +  ++ E+E          +  
Sbjct: 61  WTNGYEELARLRDDLDTIWEFYEADEATEEEVDEEGKKLADKLDEIEFRKMM----GEEG 116

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D+   ++EI AG GG+E+  +   L RMY  +A    +KV  +   D D  G K +   I
Sbjct: 117 DELPAVIEINAGAGGTESQDWASMLMRMYIMWAEKNGYKVRQVDLQDGDVAGVKSVTLEI 176

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDT 226
            G   +  +K E+GVHR+ R+   +++ R HTS  +V V P     I++++ + DI  DT
Sbjct: 177 DGEYAYGNLKSENGVHRLVRISPFDSNARRHTSFTSVYVYPLADDNIEIEVNMADITWDT 236

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            R+ G+GGQ+VN  ++AVR+ H P+GI++    E+SQ  N+  A+++L++RLY +E ++ 
Sbjct: 237 YRSGGAGGQNVNKVETAVRLHHKPSGIIIACQQERSQLMNKEVAIRLLKSRLYQIELEKR 296

Query: 286 ANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + R+     +    +   +IR+Y     R+ DHR +      E VL G I+  I   L 
Sbjct: 297 NSARAEVEASK-RKIEWGSQIRSYVLDDRRVKDHRTDYQTSNTEAVLNGDINAFIKAYLM 355

Query: 346 A 346
            
Sbjct: 356 E 356


>gi|67459393|ref|YP_247017.1| peptide chain release factor 2 [Rickettsia felis URRWXCal2]
 gi|75536187|sp|Q4UKS1|RF2_RICFE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|67004926|gb|AAY61852.1| Peptide chain release factor RF-2 [Rickettsia felis URRWXCal2]
          Length = 368

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 10/345 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +     R  E+E   S+    +            S +  K++ +++ K   +D   +  
Sbjct: 24  DVESSTERLNELEELTSDPSLWNDQANAQTLLREKSNLEEKLNAFNKLKSNLKDTLELEE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              +++++  L+QIE       +  +  +     L     D  +C LEI AG GG+E+  
Sbjct: 84  MAEAENDLETLSQIEQDLKNLSV--IAAKFETECLFSGEADGNNCFLEINAGAGGTESHD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  + RMY R+A    +K E+++  + ++ G K     I G+  +   K E+GVHR+ R
Sbjct: 142 WVSIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAVRI
Sbjct: 202 ISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRI 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           THIPT  +    S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G   
Sbjct: 262 THIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWG--- 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR+Y     + + D R +      + VL G ++D ++  L  +
Sbjct: 319 HQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEDFVSASLAMN 363


>gi|163852399|ref|YP_001640442.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
 gi|218531158|ref|YP_002421974.1| peptide chain release factor 2 [Methylobacterium chloromethanicum
           CM4]
 gi|240139734|ref|YP_002964211.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
 gi|254562146|ref|YP_003069241.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
 gi|163664004|gb|ABY31371.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
 gi|218523461|gb|ACK84046.1| peptide chain release factor 2 [Methylobacterium chloromethanicum
           CM4]
 gi|240009708|gb|ACS40934.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
 gi|254269424|emb|CAX25390.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
          Length = 321

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 108/317 (34%), Positives = 159/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   ++ I   ++  ++   L  +       + I +       A  K + +   
Sbjct: 1   MRERQELDEAVTAIKKLERDLEDGATLIELGEMEGDQASISEGE-----ATIKAVEKEAA 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  RK+KVE++  +D 
Sbjct: 56  SRQVETLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   +++ R HTS A+V V P     I+
Sbjct: 116 EEAGIKGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I   D RIDT R+SG+GGQHVNTTDSAVRITH PTGI+V    E+SQH+NR  A  +L
Sbjct: 176 IEIKESDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNML 235

Query: 274 RARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+   + +A    K  IG G    +IR+Y     + + D R        + 
Sbjct: 236 RARLYEAELKKREEKANAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGTQSTDPDE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGDLDPFMEASLAQR 309


>gi|317181479|dbj|BAJ59263.1| peptide chain release factor 2 [Helicobacter pylori F57]
          Length = 381

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 45  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVHLNRLLETYQKTKNSLDESTELFELA 104

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 105 QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 159

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 160 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 219

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 220 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 279

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  N      K +IG G    
Sbjct: 280 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNTAKNEEKSEIGWG---H 336

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 337 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 379


>gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
 gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
          Length = 310

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 100/318 (31%), Positives = 160/318 (50%), Gaps = 13/318 (4%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +  K   YD+ K    D+  +    +   E+ +L        ++  +       
Sbjct: 1   MKELKILRQKKGEYDKLKDNLDDILVMFELIDEGEEMDELPDTIEAFGKELEK-----FK 55

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              L     D  + I+ +  G GG+E+  +   L RMY R+A  + +KV+ L     D  
Sbjct: 56  LETLLSGEYDSNNAIISLHPGAGGTESQDWAEMLLRMYTRWAERKGFKVKSLDLQPGDVA 115

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDI 217
           G K     I G   +  +K E GVHR+ R+   ++SGR HTS A++ V PE  +  +++I
Sbjct: 116 GIKSATLLIEGINAYGYLKTERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEI 175

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +DIR+DT RASG+GGQHVN T SA+RITHIPTG++V   +E+SQHQN+  AM +L+ +
Sbjct: 176 NPDDIRVDTYRASGAGGQHVNKTSSAIRITHIPTGVVVQCQNERSQHQNKEVAMNMLKGK 235

Query: 277 LYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQ 333
           L ++  +    +         QI  G    +IR+Y F     + DHR N+ +  ++ V+ 
Sbjct: 236 LVEIMEQEQKEKLDDVVGDYSQIAWG---SQIRSYVFHPYNMVKDHRTNVEVGNIQSVMD 292

Query: 334 GYIDDIINPLLTAHQAKM 351
           G +D  +N  L    A+ 
Sbjct: 293 GDLDQFMNAYLQQTAAQQ 310


>gi|224419024|ref|ZP_03657030.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
          Length = 363

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 107/339 (31%), Positives = 184/339 (54%), Gaps = 10/339 (2%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L++R  EIE    +    +   K  E        + ++  Y +      D   +    +
Sbjct: 28  QLQSRIEEIESLEQQKEFWEDSKKAGEYQKEKKRCLRQLEKYKEASLALSDAKELFELSS 87

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D E  +    E   +E++I++ E E+          D  + I  I  G GG+E+  +  
Sbjct: 88  DDEETLNELFNEAPMLEEQIKKAEIEVM----LSGELDSNNAIFTITPGAGGTESQDWAS 143

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L+RMY R+A    +KVE+L   + D+ G K+    I G   +   K E+G+HR+ R+  
Sbjct: 144 MLYRMYLRWAERCGFKVELLDYQEGDEAGIKDASFIIKGENAYGYTKVENGIHRLVRISP 203

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ + HTS A+V V PE  +   ++I  +D+RIDT RASG+GGQH+N T+SA+RITHI
Sbjct: 204 FDSNAKRHTSFASVQVTPEIDDNISIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHI 263

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PTGI+V   +++SQH+N+  A+K+L+++LY++E+++   + + + K +IG G    +IR+
Sbjct: 264 PTGIVVQCQNDRSQHKNKATALKMLKSKLYELEQQKRNEQIANDDKSEIGWG---HQIRS 320

Query: 309 YNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y  +   ++ D R N+    +E +L G ID I+  +L  
Sbjct: 321 YVLAPYQQVKDLRSNIAYSNVEAILDGDIDSILEGVLIH 359


>gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
 gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG]
 gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF]
 gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
          Length = 371

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 154/354 (43%), Gaps = 13/354 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI---ISKISIYDQKKQEEQDLHT 64
            +  ++   A +E + +     D      +  + +S +   + K      +  +   L  
Sbjct: 25  DLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGLRGRIDDLGVLFE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D        +  Q      +              L     D +  ++ IRA  GG +
Sbjct: 85  LAADEGDADTQEEAEQELAAVRKALDEM-----EVRTLLSGEYDSREAVVTIRAEAGGVD 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+ F   L RMY R+A    +K E+  +S  ++ G K     +     +  +  E G HR
Sbjct: 140 ASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLSVEQGTHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSA
Sbjct: 200 LVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    + +A +    G    
Sbjct: 260 VRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD--GGNSW 317

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             ++R+Y     + + D R    +   E V  G ID  +   +   + +   SA
Sbjct: 318 GNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRKQQEQQSA 371


>gi|94969367|ref|YP_591415.1| peptide chain release factor 2 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551417|gb|ABF41341.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 343

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 18/342 (5%)

Query: 17  AEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
           AE+E   ++       +   ++  E   +   ++      ++  +      +  +     
Sbjct: 2   AEVEKEAADPNLWGNPENSQRVMRERKRLEDALATDKDLSRRTDDITAYFDLAKEGED-- 59

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
                   ++     ++R++  ++    L     D  S I+ I  G GG+E+  +   L 
Sbjct: 60  -----ITADLRREMDQLRDIVEKLETETLLSGDSDRLSAIVTIHPGAGGTESQDWAEMLL 114

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A  + ++  V      ++ G K +  T++G+  +  +  E GVHR+ R+   + 
Sbjct: 115 RMYLRWAERQGFETTVNDYQPGEEAGLKSVTITVAGQDAYGLLTSEIGVHRLVRISPFDQ 174

Query: 194 SGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           + R HTS A+V V PE  E  +V +  +DIR DT R+ G GGQHVNTTDSAVRITH PTG
Sbjct: 175 AKRRHTSFASVFVSPEIDESIEVIVKPDDIRTDTYRSGGKGGQHVNTTDSAVRITHFPTG 234

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRTY 309
           I+V   +E+SQH+NR RAMK+LR+++Y+ E ++     ++  + KL I   D   +IR+Y
Sbjct: 235 IVVSCQNERSQHKNRERAMKILRSKIYEYELEKKRAASQKVEDSKLDI---DFGSQIRSY 291

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
                R + DHR    +   + VL G +   I   L   +++
Sbjct: 292 VLHPYRMVKDHRTKFEVGDPDRVLDGDLKGFIRAYLLMRRSE 333


>gi|255547508|ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545862|gb|EEF47365.1| peptide chain release factor, putative [Ricinus communis]
          Length = 458

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 161/341 (47%), Gaps = 5/341 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+     +E + + +   D      E   A++ +  KI +  + K + +D  T++  
Sbjct: 109 LQQLEQEVTNLESKAANTSFWDDRATAQETLLALTDVKDKIKLLTEFKTKVEDAETIVKL 168

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E  +I KE+ +         L     D +S ++ I AG GG++A  +
Sbjct: 169 TEEMDSIDTGLLEEASSIIKELNKSLERFELTQLLSGPYDKESAVISITAGAGGTDAQDW 228

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K  +  + GR  +  +  E G HR+ R 
Sbjct: 229 ADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSAMIEVEGRYAYGYLSGEKGTHRIVRQ 288

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDI--PLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS + + V+P   E  +D+  P ED+ I   RA G GGQ+VN  ++AVRI
Sbjct: 289 SPFNAKGLRQTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGGQNVNKVETAVRI 348

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPTG+ V  + E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 349 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVK-AEWGQQ 407

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR Y F   + + D R       +  V+ G ++  I   L 
Sbjct: 408 IRNYVFHPYKLVKDVRTGYETSDVTSVMDGELEAFIKAYLK 448


>gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281974|sp|Q04V47|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|122283090|sp|Q04YD0|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 367

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 170/345 (49%), Gaps = 16/345 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +   K+R   +  +  +    +   +    +++   +   ++      Q   +  DL  +
Sbjct: 29  LEQDKDRLKALNEKSEDPDLWNNPEEARIVSQKKNELEKKLTPWFTIQQDILDFPDLVEL 88

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D   ++ I +L+       EK        +  L   K+++D K   L I  G GG+E+
Sbjct: 89  TLDEKGENGIGELSMEYNRLQEKFEE-----LELLGALKNSEDLKPAFLNIHPGAGGTES 143

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY RY   + ++  ++     D  G K +   + G   F  +K E+G+HR+
Sbjct: 144 QDWAEMLLRMYIRYFEKKGYQYSLIDIQAGDGAGIKNVTLHVVGDFAFGFLKGENGIHRL 203

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ R HTS  +V V PE  +     I  +DIR+D  R+SG+GGQHVNTTDSAV
Sbjct: 204 VRISPFDANKRRHTSFVSVHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAV 263

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           RITH+P+GI+V   +E+SQ +NR  A K+L+ARLY++E+++   E    +  K  I  G 
Sbjct: 264 RITHLPSGIVVACQNERSQIKNRDTAFKMLKARLYEMEQEKAKEELEKKSGEKKDIAWG- 322

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y F     + DHR +     +  V+ G I+  I   L 
Sbjct: 323 --SQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|83593375|ref|YP_427127.1| peptide chain release factor 2 [Rhodospirillum rubrum ATCC 11170]
 gi|83576289|gb|ABC22840.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodospirillum
           rubrum ATCC 11170]
          Length = 322

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 111/317 (35%), Positives = 162/317 (51%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   ++     +++  +   L  + GD   D+E     +  + +  ++ R+ E 
Sbjct: 1   MRERTHLEQSVAGYRALEREVDDAATLIEL-GDAEDDAESIAEGERMLHSAAQKARKQEL 59

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+EA  +   L RMY R+A     KVE L  S  
Sbjct: 60  ----ESLLSGEADHNDAYLEVHAGAGGTEAQDWALILLRMYTRWAEAHGHKVEFLEESAG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   ++S R HTS +++ V P     I+
Sbjct: 116 EEAGIKSATIKIVGHNAYGWLKTESGVHRLVRISPFDSSARRHTSFSSIWVYPVVDDTIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +DI  +D RIDT RASG+GGQHVN T+SAVRITHIPTGI+V   SE+SQHQN+     +L
Sbjct: 176 IDIEEKDCRIDTYRASGAGGQHVNRTESAVRITHIPTGIVVQCQSERSQHQNKDYCWSML 235

Query: 274 RARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E ++   +     + K  IG G    +IR+Y     + I D R N+     + 
Sbjct: 236 RARLYEHELQKREEKTKALEDTKTDIGWG---HQIRSYVLQPYQMIKDTRTNVETSDTQG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L A 
Sbjct: 293 VLNGDLDQFMAASLAAR 309


>gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555]
 gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016]
 gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555]
 gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 328

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 170/328 (51%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    +      +  +    +  +++ YD      +D   ++     + +   ++  E
Sbjct: 1   MQEPNFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKEEED--SMSFQE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V+   K+I          +L     D  + IL +  G GG++A  +   L RMY R+A  
Sbjct: 59  VMKDIKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYIRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +KV ++   + +D G K +  +I G   +  +K E G+HR+ R+    A+G+  TS A
Sbjct: 119 MGYKVNIIDMLEAEDAGIKSVSLSIIGEFAYGYLKSEKGIHRLVRISPFNANGKRQTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V VLPE   + D++I  ED+++DT RA G+GGQHVN T+SAVRITHIPTGI+V   +E+
Sbjct: 179 SVEVLPELTGDQDIEIRSEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH N+ +A+K+L+A+L +++ +R   +R  +   ++       +IR+Y F     + DH
Sbjct: 239 SQHYNKEQALKILKAKLVELK-ERAHKDRIEDLTGELKDMGWGSQIRSYVFHPYNLVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R  +    +  V+ G ID+ I   L   
Sbjct: 298 RTGVESSNVSSVMDGDIDNFIKGYLKQQ 325


>gi|148263843|ref|YP_001230549.1| peptide chain release factor 2 [Geobacter uraniireducens Rf4]
 gi|146397343|gb|ABQ25976.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
           uraniireducens Rf4]
          Length = 317

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 98/314 (31%), Positives = 170/314 (54%), Gaps = 13/314 (4%)

Query: 37  EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENE 96
           +E   +   +S    ++++  + + L  +  +   ++ + ++       +  E+ +  + 
Sbjct: 3   KERTVMEKTLSAWDRFNRQVDDIRVLIELGSEAEDEATLAEV-----HGLNDELEKGVSH 57

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
             +  +     D  SC + I +G GG+E+  +   L RMY RY   + WK E+      D
Sbjct: 58  AEFQKMLSGPHDASSCFVSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQAGD 117

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDV 215
           + G K +  ++SG   +  +K E+G+HR+ R+   +++ R HTS A+V V PE   +I+V
Sbjct: 118 EAGVKGVTFSVSGEYGYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEV 177

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
            +   D+R+DT R+SG+GGQHVNTTDSA+RITHIP+GI+V   +E+SQH N+  AM+VLR
Sbjct: 178 KVNEADLRVDTFRSSGAGGQHVNTTDSAIRITHIPSGIVVACQTERSQHMNKATAMRVLR 237

Query: 275 ARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYV 331
           A+LY+ E +   ++ +     K +IG G    +IR+Y       + D R  +     + V
Sbjct: 238 AKLYERELQERESQAAEIGGEKKEIGWG---SQIRSYVLHPYKMVKDLRTGVESGNPDAV 294

Query: 332 LQGYIDDIINPLLT 345
           L G +++ I   L 
Sbjct: 295 LDGDLEEFIVAFLM 308


>gi|325973695|ref|YP_004250759.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois]
 gi|325990139|ref|YP_004249838.1| peptide chain release factor 1 [Mycoplasma suis KI3806]
 gi|323575224|emb|CBZ40889.1| Peptide chain release factor 1 [Mycoplasma suis]
 gi|323652297|gb|ADX98379.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois]
          Length = 359

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 153/360 (42%), Positives = 221/360 (61%), Gaps = 11/360 (3%)

Query: 3   FLSHKQICDL------KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKK 56
            + +K+I D       K +  E E  +S+S ++   I L +E +    +I K S Y +  
Sbjct: 1   MIYNKKIYDFLTSVSEKQKILE-EKLLSDSANIKN-IALQKEISKNRELIEKFSSYKKYI 58

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
            + ++    I     D+E + L + E   +EK+I +LE E+   L P +  D K+ ++E+
Sbjct: 59  SDYEECKESIS-KGKDAEFKSLLEEECRLLEKKIEQLEQELKSDLFPSNKYDGKNIVIEM 117

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
            +  GG EAA+FV +LF  Y++YA   KWK+ V+   +++  G   I  T+SG  V+S+M
Sbjct: 118 HSAAGGEEAAIFVSNLFDSYKKYANENKWKLNVVDLRESER-GLAFITFTLSGSKVYSKM 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+ESGVHRVQRVP TE+ GRVHTS  TV+VLPEA EI++ +   DIRID  RASG+GGQH
Sbjct: 177 KYESGVHRVQRVPETESKGRVHTSTITVSVLPEADEIEIQLDPSDIRIDVYRASGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SAVR+ HIPT IMV    E+SQ  N+  A K+L+ +L++ E+K    E  +N K 
Sbjct: 237 VNKTESAVRLVHIPTNIMVACQQERSQMLNKEIAFKILKTKLWEREKKLQKEEFFSNLKQ 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           QIG G+R+E+IRTYN+ Q RITDHRI LT+  L  V++G+ + I N L    Q   + S 
Sbjct: 297 QIGKGERAEKIRTYNYPQNRITDHRILLTINNLTSVMEGHFEQIHNQLSLREQEDWLNSL 356


>gi|296089769|emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 106/354 (29%), Positives = 169/354 (47%), Gaps = 19/354 (5%)

Query: 4   LSHKQI--CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           L  K++    L  R   +  ++++    D  +   K++ E+  +   +  +   +Q+  E
Sbjct: 116 LIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLE 175

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             D+  +  + N      +  +  +                  L     D  SC +E++A
Sbjct: 176 HIDMVKLAREENDPELESESLKALLGMRRNSKE-----KELEALLAGDHDSCSCYIEVQA 230

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG+E+  +   + +MY+ +A  R + V V+     +  G K     + G   F   K 
Sbjct: 231 GAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKA 290

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQH 236
           E GVHR+ R+   ++  R HTS A VAV+P    A   V I   D+RI+  RA G+GGQH
Sbjct: 291 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQH 350

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTT+SAVRI HIPTG+     +E+SQHQN+  AM VL++RL  +E  R A   + + + 
Sbjct: 351 VNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQS 410

Query: 296 --QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              I  G+   +IRTY     R + D R N  +   + VL+G +D  I   L+A
Sbjct: 411 LTDISWGN---QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 461


>gi|219559147|ref|ZP_03538223.1| peptide chain release factor 2 [Mycobacterium tuberculosis T17]
 gi|260206441|ref|ZP_05773932.1| peptide chain release factor 2 [Mycobacterium tuberculosis K85]
 gi|308369955|ref|ZP_07419655.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu002]
 gi|308371233|ref|ZP_07424282.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu003]
 gi|308372424|ref|ZP_07428636.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu004]
 gi|308373628|ref|ZP_07433110.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu005]
 gi|308374772|ref|ZP_07437352.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu006]
 gi|308375989|ref|ZP_07668163.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu007]
 gi|308377222|ref|ZP_07668462.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu008]
 gi|308378190|ref|ZP_07481848.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu009]
 gi|308379411|ref|ZP_07486192.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu010]
 gi|308380571|ref|ZP_07490411.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu011]
 gi|308406052|ref|ZP_07494953.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu012]
 gi|54039054|sp|P66027|RF2_MYCBO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54041597|sp|P66026|RF2_MYCTU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|308325955|gb|EFP14806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu002]
 gi|308329480|gb|EFP18331.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu003]
 gi|308333326|gb|EFP22177.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu004]
 gi|308336980|gb|EFP25831.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu005]
 gi|308340794|gb|EFP29645.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu006]
 gi|308344662|gb|EFP33513.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu007]
 gi|308348612|gb|EFP37463.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu008]
 gi|308353337|gb|EFP42188.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu009]
 gi|308357171|gb|EFP46022.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu010]
 gi|308361122|gb|EFP49973.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu011]
 gi|308364657|gb|EFP53508.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu012]
 gi|323718336|gb|EGB27514.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CDC1551A]
          Length = 371

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L++R  ++E   S+    D   +     + +S    ++   ++ ++   DL  +  
Sbjct: 24  DVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEI-RELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               ++       +     E +  R          L     D++  ++ IR+G GG +AA
Sbjct: 84  LAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 144 DWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIP+GI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K   GS     
Sbjct: 264 LTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERKRLEERAELDAL-KADGGS-SWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R    +     VL G +D  +   +     +
Sbjct: 322 QMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWRNRR 368


>gi|297620623|ref|YP_003708760.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
 gi|297375924|gb|ADI37754.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
          Length = 326

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 165/329 (50%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M  +   D      +    I+ +        + K+  +D+  +  +     +   LA + 
Sbjct: 1   MEAAGFWDDPDAAQQVITEINSLKQWTIPCKELKRRLEDVKELQPEAEEAGDEGLLADLN 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 E    E       +     D+K+C L I AG GG+EA  +V  L RMY+R+   
Sbjct: 61  QELFRIENELGEL--EIRRMLSGELDNKNCYLSINAGAGGTEACDWVEMLSRMYQRWCDK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           RKWK EV+     +  G K +   ++G   F   K E GVHR+ R+   ++  R HTS A
Sbjct: 119 RKWKCEVVDMVPGEVAGTKSVTLKMTGNFAFGYSKAEKGVHRLVRISPFDSGSRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V PE   +I ++I  +DIRIDT RASG+GGQHVN TDSAVR+THIPTG++V   S++
Sbjct: 179 SVDVTPEITDDIQIEINPDDIRIDTFRASGAGGQHVNVTDSAVRMTHIPTGVVVSCQSQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQG-RIT 317
           SQ+QN+    K+L+++LY++E      +       K+ IG G    +IR Y F     + 
Sbjct: 239 SQNQNKEACFKILKSKLYEMEVMEREKKIKELGGEKMDIGWG---SQIRNYVFHPYSLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R  +    ++ V+ G +D  +N  L  
Sbjct: 296 DTRTKVESANVQAVMDGSLDLFVNAYLKE 324


>gi|315304796|ref|ZP_07874958.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
 gi|313626836|gb|EFR95807.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
          Length = 229

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 122/227 (53%), Positives = 170/227 (74%), Gaps = 1/227 (0%)

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           +FRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G HRVQRVP T
Sbjct: 1   MFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQRVPET 60

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           E+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SAVR+THIPT
Sbjct: 61  ESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVRLTHIPT 120

Query: 252 GIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           GI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK  +G+GDRSERIRTYN
Sbjct: 121 GIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSERIRTYN 180

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           + Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   ++
Sbjct: 181 YPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLND 227


>gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
           82-40]
 gi|166223624|sp|A0RQM7|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 369

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 182/348 (52%), Gaps = 8/348 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            D++ R  EIE   +     +   K +E     + I + +  +   K    D + +    
Sbjct: 27  QDIEIRLKEIEDIENRPEFWNDIKKASEIGKEKTKISNMLCKFKNVKSAISDAYELYELA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           N++ +  +     +    + +      +   ++    DD K+ I+ I  G GG+E+  + 
Sbjct: 87  NAEDD--EQTINSLFEDAQNLENKITNLEISMMLSGEDDSKNAIVSIHPGAGGTESNDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY R+     +KVE L   + D+ G K++   + G   +  +K E+G+HR+ R  
Sbjct: 145 SMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYLKAENGIHRLVRTS 204

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++GR HTS ++V V PE   +I ++I  +D+R+D  RASG+GGQHVN T+SAVRITH
Sbjct: 205 PFDSAGRRHTSFSSVMVSPEVDDDIAIEIEEKDLRLDYYRASGAGGQHVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+V   +++SQH+N+  AMK+L++RLY+ E  +     +A  K +IG G    +IR
Sbjct: 265 IPTGIVVQCQNDRSQHKNKATAMKMLKSRLYEFELMKQQEANNAIEKSEIGWG---HQIR 321

Query: 308 TYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +Y  F   ++ D R      + + +L G I  II  +L + ++     
Sbjct: 322 SYVLFPYQQVKDTRSGEAYSQTDAILDGDIKKIIESVLISQKSSANKE 369


>gi|330444184|ref|YP_004377170.1| peptide chain release factor 2 [Chlamydophila pecorum E58]
 gi|328807294|gb|AEB41467.1| Peptide chain release factor 2 [Chlamydophila pecorum E58]
          Length = 344

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 178/345 (51%), Gaps = 11/345 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +   +    E+E + ++    +  +K  +    I+ +  ++S Y + +++ + +   + D
Sbjct: 1   MEGKEATLRELEKQSAQENFWEDVVKAGKISEQIAALKRQLSEYSELQKKIETIEFFLND 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           + + ++       E+                  L     D  SC L I AG GG+E+  +
Sbjct: 61  NEACADPE--VGKELEKEFAFCESCLAVWETQRLLSGEVDKNSCFLSINAGAGGTESCDW 118

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           V  LFRMY R+A+   WKV+V+   D +  G K I   ++G   +   K ESGVHR+ R+
Sbjct: 119 VEMLFRMYSRWASRHHWKVDVIDRLDGEVAGIKHITLKLTGEYAYGYAKAESGVHRLVRI 178

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V PE   +I ++I   D+RIDT R+SG+GGQHVN T+SAVRIT
Sbjct: 179 SPFDSNAKRHTSFASVDVFPEVDDQIQIEILPNDLRIDTFRSSGAGGQHVNVTESAVRIT 238

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY--DVERKRMANERSANRKLQIGSGDRSE 304
           H+PTGI+V   +E+SQ QNR   MKVLRARLY  +++ +          K +I  G    
Sbjct: 239 HLPTGIVVSCQNERSQLQNRESCMKVLRARLYQRELQERLERRLLERKDKKEIAWG---S 295

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           +IR Y F     + D R    +  ++ ++ G  +D+ I   L  +
Sbjct: 296 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDEFIKVYLAEY 340


>gi|146415684|ref|XP_001483812.1| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 421

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 129/352 (36%), Positives = 197/352 (55%), Gaps = 14/352 (3%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
             ++ +E  +++        +    Y+ +S I+     Y Q  +    L  +I +  +D 
Sbjct: 69  KEYSVLEEAITKGNF---DQETNVRYSNLSVILDNYHRYVQDMENVAALKEMIAEE-TDP 124

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           E++  A  E+  +   ++     +   LLP  +  DK+ ILE+R G GGSEAALF GDL 
Sbjct: 125 EMQQEAIKELQHLVPNVQRSVKVLQARLLPPVSHSDKATILELRPGVGGSEAALFCGDLV 184

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
            MY  +A  +KWK   +     + G   E++ +I   G ++ ++ ESGVHRVQR+PATE 
Sbjct: 185 NMYINFANNKKWKWTKILEGLTNSGSLNEVIMSIDVPGSYNLLRHESGVHRVQRIPATET 244

Query: 194 SGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
            GR+HTS A V VLP+          + +      ++RIDTMRA G GGQHVNTTDSAVR
Sbjct: 245 KGRIHTSTAAVVVLPKISEGTESSLKDDERQFAPGEVRIDTMRAGGKGGQHVNTTDSAVR 304

Query: 246 ITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI V   + +SQ +N+ +A  +LRARL  +ER +   E+   R  Q+ + DRS+
Sbjct: 305 LTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVTTTDRSD 364

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSA 355
           +IRTYNF Q R+TDHR   +L+ ++  +QG  +++II  +        + + 
Sbjct: 365 KIRTYNFPQNRVTDHRCGFSLHDIDGCMQGYKLEEIIEHVEEKELEDRLEAL 416


>gi|308176991|ref|YP_003916397.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
 gi|307744454|emb|CBT75426.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
          Length = 371

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 173/349 (49%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  +K   A +          D         + +S   S++    + +    DL  +  
Sbjct: 25  DVDQIKADIAVLSEEAGVPNLWDDPAAAQIVTSKLSHRQSELERLTRLRTRIDDLEVLVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D++  D A+ E+++I+K + +LE             D +  ++ IR+G GG +A
Sbjct: 85  LAELEDDADTLDEAEKELVSIQKSLADLEIVTL----LSGEFDSRGAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  R +K  V+ +S  ++ G K     I     F  +  E+G HR+
Sbjct: 141 ADFAEMLLRMYLRWAERRGYKATVMDTSYAEEAGLKSATFEIDAPYAFGTLSVEAGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P       ++IP  +IR+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLIEQTDTIEIPESEIRVDVFRSSGPGGQSVNTTDSAV 260

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG++V+  +EKSQ QNR  A++VL++RL  +++++   ++         +    
Sbjct: 261 RMTHIPTGVVVSMQNEKSQIQNRAAALRVLQSRLLLLKKEQEDAQKKEFAGDVKAT--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +++R+Y  +  + + D R    +   + VL G IDD I+  +     + 
Sbjct: 319 DQMRSYVLNPYQMVKDLRTEHEVGNTQAVLDGEIDDFIDAGIRWRAGER 367


>gi|303249514|ref|ZP_07335721.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251860|ref|ZP_07533761.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256355|ref|ZP_07538138.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302651588|gb|EFL81737.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860552|gb|EFM92564.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865181|gb|EFM97081.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 301

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 12/306 (3%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           +++ I   DQ  ++ + L  +  +   +    +           E+ E   ++ +  +  
Sbjct: 2   VVNTIRTLDQGVEDVEGLIELAVEAEDEDTFNEAQVE-----ANELEEKLAKLEFQRMFS 56

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
              D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K   
Sbjct: 57  GQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSAT 116

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL-EDIR 223
             I+G   F  ++ E+G+HR+ R    +++ R HTS A   V PE  +         D+R
Sbjct: 117 VKITGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINLADLR 176

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           ID  RASG+GGQHVN T+SAVRITHIP+GI+V   + +SQHQN+ + MK L+A+LY++E 
Sbjct: 177 IDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEM 236

Query: 283 KRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
            +   E+      K  IG G    +IR+Y     RI D R  +     + VL G +D  I
Sbjct: 237 MKKNAEKQVMEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFI 293

Query: 341 NPLLTA 346
              L A
Sbjct: 294 EASLKA 299


>gi|33239657|ref|NP_874599.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33237182|gb|AAP99251.1| Protein chain release factor B [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 356

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 86/332 (25%), Positives = 161/332 (48%), Gaps = 6/332 (1%)

Query: 18  EIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRD 77
           ++E   ++    +   K  ++   +  +  +++         +D    +  +  + +   
Sbjct: 17  DLEQIAAQPDFWNDQQKARKQMRQLDEVKDQLTKLANWNAAIEDAKVSLELYELEPDNEM 76

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
           + + ++   + +     +      L     D +  +L I AG GG++A  +   L RMY 
Sbjct: 77  IEEAQIGLCQLKTEL--DLWELERLLSGPYDKEGAVLAINAGAGGTDAQDWAQMLLRMYM 134

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+A     KV +   S+ ++ G K     I GR  +  ++ E G HR+ R+    A+G+ 
Sbjct: 135 RWAESHGMKVILSELSEGEEAGIKSATIEIEGRYAYGYLQNEKGTHRLVRISPFNANGKR 194

Query: 198 HTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
            TS A + V+P+   ++ ++IP +D+ + T R+ G+GGQ+VN  ++AVRI HIPTG+ V 
Sbjct: 195 QTSFAGIEVMPQLEEDVHLEIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVR 254

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR 315
            + E+SQ QN+ +AM +L+A+L  + +++ A E +  R   I       +IR Y F   +
Sbjct: 255 CTQERSQLQNKEKAMALLKAKLMIIAQEQRAAEIADIR-GDIVEAAWGNQIRNYVFHPYQ 313

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + D R       +E V+ G +D  I  LL  
Sbjct: 314 MVKDLRSGTESNDVESVMNGDLDLFIQSLLLQ 345


>gi|62184808|ref|YP_219593.1| peptide chain release factor 2 [Chlamydophila abortus S26/3]
 gi|81313013|sp|Q5L6U9|RF2_CHLAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|62147875|emb|CAH63621.1| putative peptide chain release factor 2 [Chlamydophila abortus
           S26/3]
          Length = 368

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 171/346 (49%), Gaps = 11/346 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   +   + +E +  +           +    I  +  +I+ Y++ K   ++L   + 
Sbjct: 24  DLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIVSLKRQIAHYEEFKVRVENLAFFLN 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D   D       + ++         + +E     L     D   C L I AG GG+E+  
Sbjct: 84  D--GDVSADPELREDLEKEFTICEHILSEWETQRLLSGEVDKNPCFLTINAGAGGTESCD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  LFRMY R+AA  +WKVEV+   + D  G K +    SG   +   K E GVHR+ R
Sbjct: 142 WVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAERGVHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ + HTS A+V V P    EI++DI   D+RIDT R+SG+GGQHVN TDSAVRI
Sbjct: 202 ISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNVTDSAVRI 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           THIPTGIMV    E+SQ QNR   MK+LRAR+Y    +    ++  +RK   +I  G   
Sbjct: 262 THIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLLDRKNKKEIAWG--- 318

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
            +IR Y F     + D R       ++ ++ G  +DD +   L  +
Sbjct: 319 SQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLAEY 364


>gi|261212226|ref|ZP_05926512.1| peptide chain release factor 2 [Vibrio sp. RC341]
 gi|260838834|gb|EEX65485.1| peptide chain release factor 2 [Vibrio sp. RC341]
          Length = 300

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I   D+   + + L  +  +   D E  D    E+  +E ++ +LE    +  +   
Sbjct: 2   VDTIDQLDRGVDDVEGLLELAIEAE-DQETFDEIGPELDELEVKLEQLE----FRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C L+++AG+GG+EA  +   L RMY R+A  + +K EV+  S+ D  G K    
Sbjct: 57  DHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATV 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            I G   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE  E  D++I   D+RI
Sbjct: 117 RIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRI 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E +
Sbjct: 177 DVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQ 236

Query: 284 RMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 237 KQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIE 293

Query: 342 PLLT 345
             L 
Sbjct: 294 ASLK 297


>gi|58584553|ref|YP_198126.1| protein chain release factor B [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|58418869|gb|AAW70884.1| Protein chain release factor B [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 336

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 100/337 (29%), Positives = 171/337 (50%), Gaps = 11/337 (3%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
           R  ++E + ++        K  E     S I + +  + + + +  D  +++     +++
Sbjct: 2   RLEKLESQTADGNLWQDNQKAQEVLKEYSKIKNDVESFSKLESDYNDAISLMKSAIDEND 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
             +    EV     ++ +L        L  D  D+  C LEI +G GG+E+  +   L R
Sbjct: 62  --EEFFSEVENELVKLEKLIKRKETDFLFTDEADNNDCFLEIHSGAGGTESNDWAEMLMR 119

Query: 135 MYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           MY R+A     +KVEV+   + D  G K  +  I G   +   K ESG+HR+ R+   +A
Sbjct: 120 MYIRWAEIYHNFKVEVVEKLEGDSIGIKSAIIKIIGEKAYGWAKSESGIHRLVRISPFDA 179

Query: 194 SGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           + + HTS  ++ V P   +     +    ++IDT RASG+GGQHVN T+SAVR+THIPTG
Sbjct: 180 NSKRHTSFVSIGVTPVIEDSIDIAVDEGTLKIDTYRASGAGGQHVNKTESAVRVTHIPTG 239

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTY 309
           ++V   + +SQHQN+  A+K+L+ RLY ++ ++   + +    +K  IG G+   +IR+Y
Sbjct: 240 VIVQCQNNRSQHQNKNEALKLLKGRLYQIKLEKKEQKMAEEYGKKCGIGWGN---QIRSY 296

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
                + + D R    +  +  +  G ID  I  +LT
Sbjct: 297 VMHPYQMVKDLRTGYEVGNINSIFDGNIDCFIVNVLT 333


>gi|206901574|ref|YP_002251123.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
 gi|206740677|gb|ACI19735.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
          Length = 330

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 106/328 (32%), Positives = 179/328 (54%), Gaps = 7/328 (2%)

Query: 29  VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEK 88
            D   K+       + +  +I  +++ K + ++L           E ++  + ++  +E 
Sbjct: 8   WDDAEKVKPILTKYNKLQKEIENWEKLKADIKELSEWKDLLEEGDEYKEEFEKKLKEVEN 67

Query: 89  EIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVE 148
            ++E E      ++ +D  D+ + IL + AGTGG++A  +   L RMY R+A  + ++V+
Sbjct: 68  SLKEFEI----EMILQDPHDEANAILSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVK 123

Query: 149 VLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP 208
           +L  S  ++ G K     I G   +  +K E GVHR+ R+   +A+ R HTS A V V+P
Sbjct: 124 ILDISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIP 183

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
           E  E  ++I  ED++I+T RA G+GGQHVN  +SAVRITHIPTGI+V   +E+SQH N+ 
Sbjct: 184 ELPESTIEIRPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKE 243

Query: 268 RAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLY 326
            A++VL+ARL ++E K+   + ++  K ++       +IR+Y F     + DHR  L + 
Sbjct: 244 MALRVLKARLEELEEKKRREKIASL-KGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIG 302

Query: 327 KLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            ++ V+ G ID  I   L +   K   +
Sbjct: 303 NVQAVIDGEIDPFIEAYLYSEFKKKSKA 330


>gi|322514782|ref|ZP_08067805.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976]
 gi|322119244|gb|EFX91374.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976]
          Length = 301

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 12/306 (3%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           +++ I    Q  ++ + L  +  +   +    +       A   E+ E   ++ +  +  
Sbjct: 2   VVNTIRALAQGVEDVEGLIELAVEAEDEDTFNEAQ-----AEANELEEKLAKLEFQRMFS 56

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
              D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K   
Sbjct: 57  GQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSAT 116

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIR 223
             I+G   F  ++ E+G+HR+ R    +++ R HTS A   V PE  +         D+R
Sbjct: 117 VKITGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLR 176

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           ID  RASG+GGQHVN T+SAVRITHIP+GI+V   + +SQHQN+ + MK L+A+LY++E 
Sbjct: 177 IDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEM 236

Query: 283 KRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
            +   E+      K  IG G    +IR+Y     RI D R  +     + VL G +D  I
Sbjct: 237 MKKNAEKQAMEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFI 293

Query: 341 NPLLTA 346
              L A
Sbjct: 294 EASLKA 299


>gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
 gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
          Length = 348

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 178/344 (51%), Gaps = 8/344 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  +   IE + +E    +      E    ++ +   I  Y++     +D+  +I 
Sbjct: 9   DLDSLNLKIERIEKKTAEPDFWNR-ENSQETLKELNILKKLIEEYEKISGMNEDVSVMIE 67

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              +  +  +    + +    E           LL  +  D  + IL I AG GG+EA  
Sbjct: 68  FIEAGDDSFEKELDDKIDTVTEE---IQNFKTKLLLDEKYDSNNAILTINAGAGGTEACD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY+R++  + +KVEVL S   ++ G K I   I G   +  +K E GVHR+ R
Sbjct: 125 WTEMLYRMYDRWSNRKDFKVEVLDSLSGEEAGIKSITLNIKGSYAYGYLKGEKGVHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++G+ HTS   V V+PE  +  +V+I  ED+++DT RASG+GGQHVNTTDSAVRI
Sbjct: 185 ISPFDSNGKRHTSFTAVNVVPEIDDDVEVNIRPEDLKVDTYRASGAGGQHVNTTDSAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPT  +V    E+SQ +N+  AMK+L++RL+++E ++   E    +  +    +   +
Sbjct: 245 THIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENIKGTE-SKIEWGSQ 303

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           IR+Y F     + DHR       ++ V+ G ID  IN  L  ++
Sbjct: 304 IRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKFYK 347


>gi|184200580|ref|YP_001854787.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
 gi|183580810|dbj|BAG29281.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
          Length = 372

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 13/346 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDH 69
           L     E+E + +     D   +  +  + +S   SK+    + +    DL  +  + + 
Sbjct: 29  LLKEITELEQQAAAPDLWDNPDEAQKVTSQLSHKQSKVDRLRKIESRIDDLEVMVELAED 88

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D E RD +  E+ +I+K + ELE +           D++  ++ IR+G GG +AA F 
Sbjct: 89  EDDQETRDASATELTSIQKALSELEIQTL----LAGEYDEREAVVTIRSGAGGVDAADFA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A    +  +VL +S  ++ G K     +     F  +  E+G HR+ R+ 
Sbjct: 145 EILMRMYLRWAERHGYPTKVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRIS 204

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V V+P   ++  V+IP  ++++D  R+SG GGQ VNTTDSAVR+TH
Sbjct: 205 PFDNQGRRQTSFAAVEVIPLIESDDTVEIPETELKVDVFRSSGPGGQSVNTTDSAVRMTH 264

Query: 249 IPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRSERI 306
           IPTGI+V+       +++++        L          E  A +K   G       +++
Sbjct: 265 IPTGIVVSMQ---NEKSQIQNRAAALRVLQSRLLLLRQEEADAKKKEMAGDVKASWGDQM 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R+Y  +  + + D R N        V  G ID  I+  +       
Sbjct: 322 RSYVLNPYQMVKDLRTNYEEGNPSSVFDGGIDSFIDEGIRWRAGAR 367


>gi|269955834|ref|YP_003325623.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304515|gb|ACZ30065.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 370

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 15/351 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGD 68
            L+ + A +  + S     D      +  +A+S   ++++      +   D+ T+  +G 
Sbjct: 28  ALQAKIAVLSEQASVPDLWDDPEAAQKITSALSATQAELNRVKSLGRRIDDVETLVELGQ 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D +    A+ EV+ I K++  LE       L     D +  ++ IRAG GG +AA F
Sbjct: 88  EMGDEDSLTEAEAEVVGIRKDLDALEV----RTLLSGEYDARDAVVTIRAGAGGVDAADF 143

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A    +  +V+ +S  ++ G K     ++    F  +  E+G HR+ R+
Sbjct: 144 AEMLMRMYLRWAERHGFPTKVMDTSYAEEAGLKSATFEVNAPYAFGNLSVEAGTHRLVRI 203

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V V+P       V+IP  +I++D  R+SG GGQ VNTTDSAVR+T
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLIEQTDSVEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMT 263

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRSE 304
           HIPTGI+V+  +EKSQ QNR  A++VL++RL  V ++    E +A +K   G       +
Sbjct: 264 HIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRQQ----EEAAKKKELAGDIKASWGD 319

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           ++R+Y     + + D R          V  G ID+ I   +   +   + S
Sbjct: 320 QMRSYVLQPYQMVKDLRTEHESGNTAAVFDGAIDEFIEAGIRWRRNAQVKS 370


>gi|300692007|ref|YP_003753002.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum PSI07]
 gi|299079067|emb|CBJ51729.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum PSI07]
          Length = 300

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 97/305 (31%), Positives = 157/305 (51%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  ++  D+      +L  +  +   D  +  +                    +  +   
Sbjct: 2   VFALTKLDEDLNGGAELFELAREEGDDDTVEAVEADTAGMRAIVEDM-----EFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++I+AG GG+EA  +   L R Y +Y   + +K EVL  S+ D  G K    
Sbjct: 57  PMDAANCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   F  ++ E+GVHR+ R    +++G  HTS +++ V PE  +  ++++   D+R+
Sbjct: 117 KVEGEYAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVRITHIP+GI+V   +++SQH+NR  AM +L++RLY+ E +
Sbjct: 177 DTYRASGAGGQHINKTDSAVRITHIPSGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E       K  +G G    +IR+Y   Q RI D R N+ +   + VL G +D  I 
Sbjct: 237 KRQAEADKLEASKTDVGWG---HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDTFIE 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|326387471|ref|ZP_08209080.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208127|gb|EGD58935.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 375

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 106/342 (30%), Positives = 164/342 (47%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  E++ R+ +    D   +      E   +   I  +    Q+  +  +   +     
Sbjct: 30  RRLHELDARVEDPKLWDDPKQAEAVMRERRRLDAAIGTVKQIGQEMADAIEFVELGEMEG 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            +  + +         E+             L     D  +  LE+ AG GG+E+  +  
Sbjct: 90  DEDTVAEGLATLAALAERADA-----DKVQALLAGEADANNAFLEVHAGAGGTESQDWAE 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A    +KVE++     +  G K     I G   +   K ESGVHR+ R+  
Sbjct: 145 MLQRMYTRWAERHGYKVELVDYHAGEAAGIKGCTLLIKGENAYGYAKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            ++S R HTS ++V V PE  +  D++I   D+++DT RASG+GGQHVNTTDSAVRITH+
Sbjct: 205 YDSSARRHTSFSSVWVYPEIDDNIDIEINPADLKVDTYRASGAGGQHVNTTDSAVRITHV 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERI 306
           PTGI+V + +++SQH+NR  AM +LRARLY+ E  +     S     K +IG G    +I
Sbjct: 265 PTGIIVASQNDRSQHKNRATAMGMLRARLYEAELAKREAAASGEYAAKTEIGWG---HQI 321

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y      ++ D R  +       VL G +D  +   L+  
Sbjct: 322 RSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363


>gi|300704641|ref|YP_003746244.1| peptide chain release factor rf-2; programmed frameshift [Ralstonia
           solanacearum CFBP2957]
 gi|299072305|emb|CBJ43638.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum CFBP2957]
          Length = 300

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  ++  D+      +L  +  +   D  I  +                    +  +   
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAIETDTAGMRAIVEDM-----EFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++I+AG GG+EA  +   L R Y +Y   + +K EVL  S+ D  G K    
Sbjct: 57  PMDAANCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   F  ++ E+GVHR+ R    +++G  HTS +++ V PE  +  ++++   D+R+
Sbjct: 117 KVEGEYAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVRITHIPTGI+V   +++SQH+NR  AM +L++RLY+ E +
Sbjct: 177 DTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E       K  +G G    +IR+Y   Q RI D R N+ +   + VL G +D  I 
Sbjct: 237 KRQAEADKLEASKTDVGWG---HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDAFIQ 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|211938843|pdb|2JL5|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
           Contains The 30s Subunit.
 gi|211938901|pdb|2JL7|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
           Contains The 30s Subunit.
 gi|237823553|pdb|2WH1|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823612|pdb|2WH3|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome). This File Contains The
           30s Subunit
          Length = 351

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 15/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   + R  E+E R+ +    +      K+++E A +   +      +   Q   +L  
Sbjct: 13  DIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELME 72

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     ++   +L +      E   + L               +K+ IL I+ G GG+E
Sbjct: 73  ELPAEEREALKPELEEAAKKLDELYHQTL---------LNFPHAEKNAILTIQPGAGGTE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A  + ++VEV+  +   + G       + G   +  +  E+GVHR
Sbjct: 124 ACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGVHR 183

Query: 185 VQRVPATEASGRVHTSAA-TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +ASGR HTS A    +     E++V +  E++RID MRASG GGQ VNTTDSA
Sbjct: 184 LVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V   + +SQ +N+  A+K+L+ARLY++ERK+   E  A R  ++   + 
Sbjct: 244 VRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALR-GEVEPIEW 302

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y   +  + DHR  L  +  E VL G + D+I   L     + 
Sbjct: 303 GSQIRSYVLDKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWKAGRR 351


>gi|302766928|ref|XP_002966884.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
 gi|300164875|gb|EFJ31483.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
          Length = 427

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 17/344 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           D+ ++  ++E  + +        + +    E+ ++S  + +I   + +  E  DL  +  
Sbjct: 87  DVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREMESELVENVDLVELAR 146

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +   +    +         +            L L  + +D   C LE++AG GG+E+  
Sbjct: 147 EEKDEQVEAEAVSALATLRKAAKD-----KELLALLCEENDGCPCFLEVQAGAGGAESMD 201

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY+ +A  R ++  V+     D  G K     + G   +   K E+GVHR+ R
Sbjct: 202 FAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAKTEAGVHRLVR 261

Query: 188 VPATEASGRVHTSAATVAVLPEAAE--IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   + +GR HTS A VAV+P       +++I   D+ ID  R+SG+GGQHVNTTDSA+R
Sbjct: 262 ISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQHVNTTDSAIR 321

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDR 302
           I H PTGI V   +E+SQH+N+  AM+VLR+RLY +E KR   E + + +   +I  G+ 
Sbjct: 322 IVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQSLHEISWGN- 380

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     + + D R    +     VL G +D  I   L+
Sbjct: 381 --QIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFILQYLS 422


>gi|326564766|gb|EGE14978.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1]
          Length = 304

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 103/309 (33%), Positives = 155/309 (50%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +  I+  I     K  +   +  +  + + +S + D+      A+          + +  
Sbjct: 2   LDGIVGVIDGLSAKLDDAAAMLELAVEDDDESLLSDVQAELDDALNSVEE-----LEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +C L+I++G+GG+EA  +   L RMY R+     +K EVL  S+    G K
Sbjct: 57  MFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                + G   F  ++ E GVHR+ R    +++   HTS A V V PE  +         
Sbjct: 117 SATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPA 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH PTG++V   +E+SQH N+  AMK+LRA+LY+
Sbjct: 177 DLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYE 236

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   ++      K  IG G    +IR+Y     RI D R  +       VL G +D
Sbjct: 237 LEMQKRMEKQQALEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVETSNTTAVLNGDLD 293

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 294 KFIEASLKA 302


>gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium
           praevalens DSM 2228]
          Length = 365

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 177/346 (51%), Gaps = 10/346 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L  +++ + KN    IE  M+     D      ++   +  I  +I +    +++ ++ 
Sbjct: 22  LLDREKLFETKN---SIEAEMAAGGFWDDKENARQKSQQLDRIKKRIKVIQSLEEKFEEA 78

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              +     +    +      LA  ++  E       L  P    DD + IL I  G GG
Sbjct: 79  EIYLELAAEEDANLNKELQNTLAELEKEIEKLELKLRLNEPY---DDHNAILSIHPGAGG 135

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +E+  +   L RMY R+A    +++E L  +  ++ G K +   ISG   +  +K E GV
Sbjct: 136 TESQDWAQMLLRMYSRWAEANDYQLETLDFNPGEEAGIKSVTLMISGDYAYGYLKGERGV 195

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +ASGR HTS A+V V+PE     +V+I   +++IDT RASG+GGQHVN TD
Sbjct: 196 HRLVRISPFDASGRRHTSFASVDVMPEIDSDLEVEIDENNLKIDTYRASGAGGQHVNKTD 255

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH PTG++V   +++SQH+N+  AMK+L ++L +++R+  A +       +    
Sbjct: 256 SAVRITHQPTGVVVQCQNQRSQHKNKETAMKILSSKLLELKREAQAEKIDEL-GGEHKEI 314

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y F     I DHR +     ++ V+ GY+D+ I   L 
Sbjct: 315 AWGSQIRSYVFHPYSMIKDHRTDFEEGNVDKVMDGYLDEFIESYLK 360


>gi|83748475|ref|ZP_00945497.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
           solanacearum UW551]
 gi|207725248|ref|YP_002255644.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum MolK2]
 gi|207743623|ref|YP_002260015.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum IPO1609]
 gi|83724886|gb|EAP72042.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
           solanacearum UW551]
 gi|206590482|emb|CAQ37444.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum MolK2]
 gi|206595022|emb|CAQ61949.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum IPO1609]
          Length = 300

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  ++  D+      +L  +  +   D  I  +                    +  +   
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAIEADTAGMRAIVEDM-----EFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++I+AG GG+EA  +   L R Y +Y   + +K EVL  S+ D  G K    
Sbjct: 57  PMDAANCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   F  ++ E+GVHR+ R    +++G  HTS +++ V PE  +  ++++   D+R+
Sbjct: 117 KVEGEYAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVRITHIPTGI+V   +++SQH+NR  AM +L++RLY+ E +
Sbjct: 177 DTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E       K  +G G    +IR+Y   Q RI D R N+ +   + VL G +D  I 
Sbjct: 237 KRQAEADKLEASKTDVGWG---HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDAFIQ 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
 gi|81666133|sp|Q7VIE6|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
          Length = 366

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 182/343 (53%), Gaps = 9/343 (2%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L+ +  +IE    +    +   +  E           +  Y   KQE  D   +     
Sbjct: 28  SLQKQLKDIENLEQDEHFWNDSKRAAEVAKQKRKCERMLQTYTNTKQEIDDALELYEIAM 87

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           S+ + R L  +   A          ++   ++    +D  + I+ I+ G GG+E+  +  
Sbjct: 88  SEEDSRTLELLFEQAPSLLSHI--QKVEIEVMLSGENDGSNAIITIQPGAGGTESQDWAS 145

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L+RMY R++  R +KVE+L   D ++ G K +   I G   +   K E+GVHR+ R+  
Sbjct: 146 ILYRMYLRWSERRGFKVELLDYQDGEEAGIKGVAFIIKGENAYGYAKSENGVHRLVRISP 205

Query: 191 TEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +A+ + HTS A+V V PE   +I+++I  +DIRIDT RASG+GGQHVN T+SA+RITH 
Sbjct: 206 FDANAKRHTSFASVQVSPELDDDINIEIEDKDIRIDTYRASGAGGQHVNKTESAIRITHF 265

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PTGI+V   +++SQH+N+  AMK+L+++LY++E ++   E ++  K +IG G    +IR+
Sbjct: 266 PTGIVVQCQNDRSQHKNKATAMKMLKSKLYELELQKNQ-EGASQEKSEIGWG---HQIRS 321

Query: 309 YNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           Y  +   ++ D R          VL G ID+II  +L    AK
Sbjct: 322 YVLAPYQQVKDLRTQFATSDTSGVLDGDIDEIIESVLVHTSAK 364


>gi|257069176|ref|YP_003155431.1| peptide chain release factor 2 [Brachybacterium faecium DSM 4810]
 gi|256559994|gb|ACU85841.1| bacterial peptide chain release factor 2 (bRF-2) [Brachybacterium
           faecium DSM 4810]
          Length = 371

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 104/350 (29%), Positives = 175/350 (50%), Gaps = 15/350 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            I  L  + A++E + S     D      +  +A+S   S+     +     +DL  +  
Sbjct: 25  DIDALDAKIADLEKQASAQDLWDDVDNAQKVSSALSHAQSERRRISELDSRIEDLEVMVQ 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D++  + A+ E+++I K + ELE       L     D++  ++ IRAG GG +A
Sbjct: 85  LAAEEDDADTLEEAENELVSIHKTLDELEV----RTLLSGEYDERDAVITIRAGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +  +V+ +S  ++ G K +   +S    +  +  E G HR+
Sbjct: 141 ADFAEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTFEVSAPFAYGTLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   +   ++IP  D+++D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVIPLIESTDSIEIPENDLKVDVFRSSGPGGQSVNTTDSAV 260

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GD 301
           R+TH+PTG +V+   EKSQ QNR  A++V+++RL  ++      E +A RK   G     
Sbjct: 261 RMTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRLLLLK----KAEEAAERKELAGDVKAS 316

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             +++R+Y  +  + + D R +        V  G ID+ I+  +     +
Sbjct: 317 WGDQMRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGIRWRAEQ 366


>gi|21231300|ref|NP_637217.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768648|ref|YP_243410.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991534|ref|YP_001903544.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112954|gb|AAM41141.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573980|gb|AAY49390.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733294|emb|CAP51493.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris]
          Length = 313

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +   +  I+       +  +L  +  +   D +       ++   +  + +LE +     
Sbjct: 2   LEKTVIGIADVLAGLTDAGELLDLA-ESEQDEDTAVAVIADLDKYQAHVEKLEFQRM--- 57

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
                 D  +  ++I+AG GG+EA  +   L RMY R+A  R WK E++  S  +  G K
Sbjct: 58  -FSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                I G   +  +K E GVHR+ R    ++  R HTS  +V V PE    I++DI   
Sbjct: 117 SATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPA 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQNR  AMK+L A+LY+
Sbjct: 177 DLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYE 236

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   ER A    K  IG G    +IR Y   Q RI D R  +     + VL G +D
Sbjct: 237 LEVQKRNVERDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTGIERSDTQKVLDGDLD 293

Query: 338 DIINPLLTA 346
           + +   L A
Sbjct: 294 EFVEASLKA 302


>gi|220913146|ref|YP_002488455.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
 gi|254790908|sp|B8HBH8|RF2_ARTCA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|219860024|gb|ACL40366.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
          Length = 371

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 169/352 (48%), Gaps = 11/352 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   AE+  R  E    D      +  + +S   S++           DL  +  
Sbjct: 25  DMEALREDIAELSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTLASRIDDLEVLVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G    D++    A  E+ +I+K ++ LE             D++  ++ IRAG GG +A
Sbjct: 85  LGQDEGDADSMGEAAAELESIQKALKNLEVVTL----LSGEYDEREAVVSIRAGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +   V+ +S  ++ G K     +     F  +  E+G HR+
Sbjct: 141 ADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P       +DIP  +IR+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQSVNTTDSAV 260

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIPTG++V+  +EKSQ QNR  AM+VL++RL  +++++   E+ A       S    
Sbjct: 261 RLTHIPTGVVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGDVKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +++R+Y  +  + + D R    +     V  G IDD I+  +          
Sbjct: 319 DQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWRTDNRNAE 370


>gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
 gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
          Length = 368

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 166/348 (47%), Gaps = 11/348 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  L+   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDKLRADIAVLEEQAAVPSLWDNPDEAQKITSKLSHLQAEVRKAEALRGRIDDLGVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+ ++ K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAESELASVRKALDEMEV----RTLLSGEYDSREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A  + +K E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+V   +E+SQ QN+  AM VL+A+L D  R+       A +    G     
Sbjct: 261 RLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQEEQARMDALKGD--GGNSWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            ++R+Y     + + D R    +   E V  G I+  +   +   + +
Sbjct: 319 NQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRKQQ 366


>gi|149192359|ref|ZP_01870562.1| peptide chain release factor 1 [Vibrio shilonii AK1]
 gi|148833798|gb|EDL50832.1| peptide chain release factor 1 [Vibrio shilonii AK1]
          Length = 229

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 125/227 (55%), Positives = 172/227 (75%), Gaps = 2/227 (0%)

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
           FRMY +YA  + W++EV+SS++++ GGYKE++A +SG G +  +KFESG HRVQRVPATE
Sbjct: 1   FRMYSKYAEKKGWRIEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATE 60

Query: 193 ASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           + GRVHTSA TVAV+ E  E +  +I   D++IDT RASG+GGQHVNTTDSA+RITH+PT
Sbjct: 61  SQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPT 120

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           G +V    E+SQH+N+ +AM VL AR+   E  + A E S  R+  +GSGDRS+RIRTYN
Sbjct: 121 GTVVECQDERSQHKNKAKAMSVLAARIIAAEEAKRAAEVSDTRRNLLGSGDRSDRIRTYN 180

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           + QGR++DHRINLTLY+L  V++G +  +++P+L  HQA  + + +E
Sbjct: 181 YPQGRVSDHRINLTLYRLSEVMEGDLQSLVDPVLQEHQADQLAALAE 227


>gi|302755404|ref|XP_002961126.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
 gi|300172065|gb|EFJ38665.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
          Length = 427

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 17/344 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           D+ ++  ++E  + +        + +    E+ ++S  + +I   + +  E  DL  +  
Sbjct: 87  DVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREMESELVENVDLVELAR 146

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +   +    +         +            L L  + +D   C LE++AG GG+E+  
Sbjct: 147 EEKDEQVEAEAVSALATLRKAAKD-----KELLALLCEENDGCPCFLEVQAGAGGAESMD 201

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY+ +A  R ++  V+     D  G K     + G   +   K E+GVHR+ R
Sbjct: 202 FAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAKTEAGVHRLVR 261

Query: 188 VPATEASGRVHTSAATVAVLPEAAE--IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   + +GR HTS A VAV+P       +++I   D+ ID  R+SG+GGQHVNTTDSA+R
Sbjct: 262 ISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQHVNTTDSAIR 321

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDR 302
           I H PTGI V   +E+SQH+N+  AM+VLR+RLY +E KR   E + + +   +I  G+ 
Sbjct: 322 IVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQSLHEISWGN- 380

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     + + D R    +     VL G +D  I   L+
Sbjct: 381 --QIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFILQYLS 422


>gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
 gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
          Length = 365

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 187/344 (54%), Gaps = 14/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            ++K R  EIE   ++        K   + +E   IS I++K         + + L+ + 
Sbjct: 27  ENIKARLKEIEELENDQNLWQDIAKAGAIGKEKTKISNILNKFLNAKNAVDDAKALYELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N +          + A   E+ +    +   ++    +DDK+ I+ I  G GG+E+ 
Sbjct: 87  NSENDEE-----TINSLFAEADELEDKIINLEISMMLSGENDDKNAIVSIHPGAGGTESN 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+     +K+EVL   + ++ G K++   + G   +  +K E+G+HR+ 
Sbjct: 142 DWASMLYRMYLRFCEREGFKIEVLDFQEGEEAGLKDVSFIVRGENAYGYLKAENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           RV   +++GR HTS ++V V PE   +I+++I  +DIR+D  RASG+GGQH+N T+SAVR
Sbjct: 202 RVSPFDSAGRRHTSFSSVMVSPELNDDIEINIEEKDIRVDVFRASGAGGQHINKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+V   +++SQH+N+  AMKVL++RLY++E  +   +     K +IG G    
Sbjct: 262 ITHIPTGIVVNCQNDRSQHKNKETAMKVLKSRLYELELMKQREKDENAPKSEIGWG---H 318

Query: 305 RIRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y  F   ++ D+R      + + +L G I  II  +L + 
Sbjct: 319 QIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKSIIEGVLISQ 362


>gi|167626878|ref|YP_001677378.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596879|gb|ABZ86877.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 346

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 174/343 (50%), Gaps = 17/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+ + + +    D       L  +   +  ++       +  +         
Sbjct: 11  DVKKERLTEVLMELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETL------- 63

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +    +E  +    E+    +++     ++ +  +     D  +  L+I++G+GG+EA 
Sbjct: 64  TELLELAEEDESLMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQ 123

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A    +KV V   SD D  G K     + G   +  ++ E+G+HR+ 
Sbjct: 124 DWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLV 183

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++ + HTS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVR
Sbjct: 184 RKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVR 243

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPT I+V + S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G  
Sbjct: 244 ITHIPTNIVVQSQSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG-- 301

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y   Q RI D R  +     + VL G +D  I   L 
Sbjct: 302 -SQIRSYVLDQSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 343


>gi|329769029|ref|ZP_08260451.1| peptide chain release factor 2 [Gemella sanguinis M325]
 gi|328839520|gb|EGF89096.1| peptide chain release factor 2 [Gemella sanguinis M325]
          Length = 372

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 185/350 (52%), Gaps = 11/350 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I D + R AEIE  M ++   +     +        I  ++  +       +    ++ 
Sbjct: 25  KIEDKEQRVAEIENMMLDADFWNDSDNASALVTESKSIKKELDEFSNMLDYLEHSQEMVE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +       ++      +++   + ++ LL  +  D+ + IL+I AG GG++A  
Sbjct: 85  FLRDEEDKE--IYNDLEETVATLKDSVEDFSFRLLFSEEYDNNNAILDIHAGAGGTDATD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   + RMYER+ + +  K   L+    D  G K     + G   +  +K E GVHRV R
Sbjct: 143 WAEIMLRMYERFFSKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLLKGEKGVHRVIR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   + SG+ HTS A++ V+PE ++   +++I  +D++IDT RA G+GGQH+NTTDSAVR
Sbjct: 203 ISPFDPSGKRHTSFASIDVMPEFSDDEINIEINNDDLKIDTYRAQGAGGQHINTTDSAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDR 302
           ITH+PTGI+V + +E+SQ +N+  AMK L+++LY +E +    E ++ R  Q  IG G  
Sbjct: 263 ITHLPTGIVVQSQAERSQIKNKDTAMKNLKSKLYQLELEEKEKELASIRGEQKDIGWG-- 320

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y F+    + DHR N  +  ++ V+ G I D I+  L  +  + 
Sbjct: 321 -SQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGDIIDFIDAYLHYNMKEK 369


>gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
           18P13]
          Length = 375

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 186/347 (53%), Gaps = 16/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           Q+   ++   ++ ++++     D      K+ ++   +   + K    +QK ++   L  
Sbjct: 26  QVARAQSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLNQKLEDTIALID 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + + DS   ++ Q     +E    ELE E    LL  + D   + IL   AG GG+E
Sbjct: 86  LCMEEDDDSSNEEILQ----DVESFKEELEAEKLSTLLTGEYDG-SNAILTFHAGAGGTE 140

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L+RMY R+A    +KV +L   D D+ G K     + G+  +  +K E+GVHR
Sbjct: 141 AQDWAQMLYRMYNRWAERHDFKVSLLDYLDGDEAGLKSASMLVEGQNAYGFLKSEAGVHR 200

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + RV   +ASGR HTS A + V+PE    ++VDI LED+++D  R+SG+GGQH+N T SA
Sbjct: 201 LVRVSPFDASGRRHTSFAALEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHINKTSSA 260

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VR+THIPTGI+V   +++SQ QNR  AMK+LR++L +++ +    + S  + +Q  I  G
Sbjct: 261 VRLTHIPTGIVVSCQTQRSQFQNRDFAMKMLRSKLVEIKEREHLEKISDIKGVQKEIAWG 320

Query: 301 DRSERIRTYNFSQGRI-TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y F    +  DHR       +  V+ G +D  IN  L A
Sbjct: 321 A---QIRSYVFMPYTLAKDHRTGFENGNISAVMDGDLDGFINAYLKA 364


>gi|295426388|ref|ZP_06819038.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
           11664]
 gi|295063756|gb|EFG54714.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
           11664]
          Length = 332

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 97/333 (29%), Positives = 162/333 (48%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD---LHTVIGDHNSDSEIRDLA 79
           M+E    +   +  +  +  + +  K   + + K+E +D      +I +        ++ 
Sbjct: 1   MAEPNFWNDQDQAQKLISETNLLKEKRDSFLELKKEYEDETTALELIKEEPDKELQEEVE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                          +     LL     D  + ++EI  G GG+EA  +   L RMY+RY
Sbjct: 61  NNLTHLQSAF-----HNYELDLLMSGKYDSHNALVEIHPGAGGTEAMDWASMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +K E+      ++ G K +   +SG+  +  +K E+GVHR+ R+   +++ R HT
Sbjct: 116 CESVGFKFEINDYEPGEEAGVKSVSIRVSGKNAYGMLKSENGVHRLVRISPFDSAKRRHT 175

Query: 200 SAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTS 257
           S A+V V+PE  +         D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + 
Sbjct: 176 SFASVEVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +++SQ QNR  AM  LRA+L+ +E ++   ++ A +  Q  IG G    +IR+Y F    
Sbjct: 236 AQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWG---SQIRSYVFHPYN 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + D R N     ++ V+ G +   I   L   
Sbjct: 293 LVKDLRTNYETADVKGVMDGKLQPFIYAYLQWR 325


>gi|6321295|ref|NP_011372.1| Mrf1p [Saccharomyces cerevisiae S288c]
 gi|400276|sp|P30775|RF1M_YEAST RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|3972|emb|CAA42932.1| mitochondrial release factor 1 [Saccharomyces cerevisiae]
 gi|1322722|emb|CAA96855.1| MRF1 [Saccharomyces cerevisiae]
 gi|1498241|emb|CAA68219.1| MRF1 [Saccharomyces cerevisiae]
 gi|151943668|gb|EDN61978.1| mitochondrial translation release factor [Saccharomyces cerevisiae
           YJM789]
 gi|190407089|gb|EDV10356.1| mitochondrial polypeptide chain release factor [Saccharomyces
           cerevisiae RM11-1a]
 gi|207345440|gb|EDZ72262.1| YGL143Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272236|gb|EEU07227.1| Mrf1p [Saccharomyces cerevisiae JAY291]
 gi|259146366|emb|CAY79623.1| Mrf1p [Saccharomyces cerevisiae EC1118]
 gi|285812067|tpg|DAA07967.1| TPA: Mrf1p [Saccharomyces cerevisiae S288c]
 gi|323304985|gb|EGA58739.1| Mrf1p [Saccharomyces cerevisiae FostersB]
          Length = 413

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 139/365 (38%), Positives = 199/365 (54%), Gaps = 16/365 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L  KQ    +    +++  +S     D  +   + YA +S +      Y +K  E + L 
Sbjct: 52  LLVKQAEKYEAELKDLDKDLSCGIHFD--VNKQKHYAKLSALTDTFIEYKEKLNELKSLQ 109

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I    SD  +R  A+ E   +  +     + +   LLP     DK  +LE+R G GG 
Sbjct: 110 EMIV---SDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGI 166

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGV 182
           EA +F  +L  MY  YA  RKWK  ++S ++N+ G G  + + +I   G + R++FE+GV
Sbjct: 167 EAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGV 226

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGG 234
           HRVQR+P+TE  GR HTS A V VLP+            +      +IR+D MRASG GG
Sbjct: 227 HRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGG 286

Query: 235 QHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVNTTDSAVR+THIP+GI+V+   E+SQH+N+ +A  +LRARL + ER     +    R
Sbjct: 287 QHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEKEEKERKAR 346

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMI 352
           K Q+ S +RS++IRTYNF Q RITDHR   TL  L  VL G  +D++I  +      +  
Sbjct: 347 KSQVSSTNRSDKIRTYNFPQNRITDHRCGFTLLDLPGVLSGERLDEVIEAMSKYDSTERA 406

Query: 353 GSASE 357
               E
Sbjct: 407 KELLE 411


>gi|261749210|ref|YP_003256895.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497302|gb|ACX83752.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 364

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 146/365 (40%), Positives = 222/365 (60%), Gaps = 16/365 (4%)

Query: 1   MVFLS-HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEY---AAISPIISKISIYDQKK 56
           M  +S  K+   L+  F  I   + +   V    K          +  +++    Y +K 
Sbjct: 1   MKKISLIKKFEILEKEFHGIGNSIIQPHIVSNQKKYKTLLKKYRKLEKVVNIYEKYKKKL 60

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT-------DDD 109
              Q+ ++++  ++SD E++++A +E   I +++  +E + + LL            +D 
Sbjct: 61  TALQEANSILK-NDSDPEMKEIAYLEKNKILEDLSNIEKKSDDLLFSTSPTGRENLENDH 119

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
           ++ I+E+R+GTGG EA LFV D+ RMY  Y     WK +++ +      GYKEI+  +SG
Sbjct: 120 RNAIVELRSGTGGDEACLFVEDILRMYIMYFKQVGWKYKIIHAQKGGIQGYKEIILDVSG 179

Query: 170 RG---VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDT 226
           +    V+  +KFESGVHRVQR+P TE+ GRVHTSA TVAVLPE  +I++ I L DI+ DT
Sbjct: 180 KEGEGVYGNLKFESGVHRVQRIPKTESQGRVHTSAITVAVLPEIKDIEMKIHLSDIKKDT 239

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            R+SGSGGQHVN T+SAVR+THIPT I V    E+SQH+N  +AM VLR+R+Y  E+++ 
Sbjct: 240 FRSSGSGGQHVNKTESAVRLTHIPTKITVECQEERSQHKNFEKAMNVLRSRIYQNEKEKR 299

Query: 286 ANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             ERS  RK  + +GDRS +IRTYN+ +GR+TDHRI+ ++Y L   + G I ++IN L  
Sbjct: 300 FKERSIKRKSLVSTGDRSVKIRTYNYPKGRVTDHRIHKSIYNLVGFMNGNIQEMINFLKL 359

Query: 346 AHQAK 350
           + + +
Sbjct: 360 SEKNQ 364


>gi|46200154|ref|YP_005821.1| peptide chain release factor 2 [Thermus thermophilus HB27]
 gi|55980111|ref|YP_143408.1| peptide chain release factor 2 [Thermus thermophilus HB8]
 gi|218766794|pdb|3F1E|X Chain X, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
           70s Ribosome. The Entire Crystal Structure Contains Two
           70s Ribosomes As Described In Remark 400.
 gi|218766850|pdb|3F1G|X Chain X, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|46197782|gb|AAS82194.1| bacterial peptide chain release factor 2 (RF-2) [Thermus
           thermophilus HB27]
 gi|55771524|dbj|BAD69965.1| peptide chain release factor 2 [Thermus thermophilus HB8]
          Length = 378

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 15/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   + R  E+E R+ +    +      K+++E A +   +      +   Q   +L  
Sbjct: 31  DIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELME 90

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     ++   +L +      E   + L               +K+ IL I+ G GG+E
Sbjct: 91  ELPAEEREALKPELEEAAKKLDELYHQTL---------LNFPHAEKNAILTIQPGAGGTE 141

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A  + ++VEV+  +   + G       + G   +  +  E+GVHR
Sbjct: 142 ACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGVHR 201

Query: 185 VQRVPATEASGRVHTSAA-TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +ASGR HTS A    +     E++V +  E++RID MRASG GGQ VNTTDSA
Sbjct: 202 LVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSA 261

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V   + +SQ +N+  A+K+L+ARLY++ERK+   E  A R  ++   + 
Sbjct: 262 VRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALR-GEVRPIEW 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y   +  + DHR  L  +  E VL G + D+I   L     + 
Sbjct: 321 GSQIRSYVLDKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWKAGRR 369


>gi|283850198|ref|ZP_06367487.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
 gi|283574224|gb|EFC22195.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
          Length = 314

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 116/317 (36%), Positives = 173/317 (54%), Gaps = 14/317 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E + ++  ++        K +  +  ++  D NS   +  LA+  V          E
Sbjct: 4   ILREKSVLTAKVTGGEKLLAAKADLDEWMSLAKDDNSPEILDALAEQIVSLGS------E 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                L      +D+   ILEI  G GG+EA  +   L RMY R+A  +++ ++VL    
Sbjct: 58  LADAELAAFFGPEDNADAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKQFGIKVLDFLP 117

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EI 213
            D+ G K +   ISG   +  +  E G+HR+ R+   ++SGR HTS A+V V P+A  +I
Sbjct: 118 GDEAGVKSVTLQISGPYAYGLLDAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGLDI 177

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           D+D+  ED+R+D  RASG GGQHVN T SA+RITH+PTGI+V   +EKSQH+NR  AMKV
Sbjct: 178 DIDVKEEDLRVDVFRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRESAMKV 237

Query: 273 LRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           L+ARLYD+E K++  E+    + K  IG G    +IRTY     + + DHR  + +  + 
Sbjct: 238 LKARLYDLELKKIQAEKQENYDSKNAIGFG---SQIRTYTMQPYQLVKDHRTGVEVGDVG 294

Query: 330 YVLQGYIDDIINPLLTA 346
            V+ G +D  I   L A
Sbjct: 295 AVMDGELDKFIRGYLLA 311


>gi|299137096|ref|ZP_07030279.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8]
 gi|298601611|gb|EFI57766.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8]
          Length = 375

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 17/346 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           LK   A IE ++++        K   L  E   +   ++  +   ++ ++      ++ +
Sbjct: 26  LKKELAVIEEKIADPAVWADAAKSQPLMRERKRLESQLADDAELARRGEDIDAYFDLMRE 85

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             +  E       ++      +      +    +  + +D  + I+ +  G GG+E+  +
Sbjct: 86  GEASVE------PDLKREIDSLVAFSEALESRTMLSEENDTLNAIVTVHPGAGGTESQDW 139

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A  + +K E+    D D+ G K    TI+G   F  +  E+GVHR+ R+
Sbjct: 140 AEMLMRMYLRWAERQGFKTEINELQDGDEAGIKSATFTITGDFAFGLIAGETGVHRLVRI 199

Query: 189 PATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              + + R HTS A+V V PE  +   +DI  +D+RIDT R+ G GGQHVNTTDSAVRIT
Sbjct: 200 SPFDQAKRRHTSFASVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVNTTDSAVRIT 259

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSE 304
           H+PTGI+    +E+SQH+N+ +AMK+LR+RLY+ E  +      +  + KL+I   +   
Sbjct: 260 HLPTGIVAGCQNERSQHKNKEKAMKMLRSRLYEYELDKKKAVSRKLEDSKLEI---NFGS 316

Query: 305 RIRTYNFSQGRI-TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           +IR+Y     RI  D R  + +  ++ VL G ++  I   L   + 
Sbjct: 317 QIRSYVLQPYRIAKDLRTRVEVGDVDRVLDGELEPFIRGYLKMRRE 362


>gi|261839033|gb|ACX98798.1| peptide chain release factor 2 [Helicobacter pylori 52]
          Length = 363

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|229525316|ref|ZP_04414721.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426]
 gi|229338897|gb|EEO03914.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426]
          Length = 299

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I   D+   + + L  +  +   D E  D    E+  +   + +LE    +  +   
Sbjct: 1   MDTIDQLDRGVDDVEGLLELAIEAE-DQETFDEIGPELDELGARLEQLE----FRRMFSG 55

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C L+++AG+GG+EA  +   L RMY R+A  + +K EV+  S+ D  G K    
Sbjct: 56  DHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATV 115

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            I G   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE  E  D++I   D+RI
Sbjct: 116 RIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRI 175

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E +
Sbjct: 176 DVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQ 235

Query: 284 RMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 236 KQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIE 292

Query: 342 PLLT 345
             L 
Sbjct: 293 ASLK 296


>gi|308182345|ref|YP_003926472.1| peptide chain release factor 2 [Helicobacter pylori PeCan4]
 gi|308064530|gb|ADO06422.1| peptide chain release factor 2 [Helicobacter pylori PeCan4]
          Length = 363

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESIELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|307636860|gb|ADN79310.1| hypothetical protein hp908_0179 [Helicobacter pylori 908]
 gi|325995449|gb|ADZ50854.1| Peptide chain release factor 2 [Helicobacter pylori 2018]
 gi|325997047|gb|ADZ49255.1| Peptide chain release factor 2 [Helicobacter pylori 2017]
          Length = 363

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|167563347|ref|ZP_02356263.1| peptide chain release factor 2 [Burkholderia oklahomensis EO147]
 gi|167570518|ref|ZP_02363392.1| peptide chain release factor 2 [Burkholderia oklahomensis C6786]
          Length = 248

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 99/249 (39%), Positives = 149/249 (59%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V++   
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RLY+
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +   + VL G +D
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I   L  
Sbjct: 238 DFIGASLKQ 246


>gi|317012016|gb|ADU82624.1| peptide chain release factor 2 [Helicobacter pylori Lithuania75]
          Length = 363

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K ESGVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSTKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|254520266|ref|ZP_05132322.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA]
 gi|226914015|gb|EEH99216.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA]
          Length = 325

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 7/329 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E+   +   +  E       I  KI  Y+      +D+  +        E  + +  E
Sbjct: 1   MQENGFWEDIKRAEEVTKESKRIKDKIDRYESLVSRIEDVEILAELI---DEDDEESIDE 57

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V+   + I +        LL     D    IL + AG GGS+A  +   L RMY R+   
Sbjct: 58  VIREIRSIEKDVEGYRIELLLSGEYDRNDAILTLHAGVGGSDANDWTEMLLRMYTRWCEK 117

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L   + D+ G K +   + G   +  +K E GVHR+ R+    A+G+  TS A
Sbjct: 118 RGFKVETLDYLEGDEAGIKSVTLKVKGEFAYGYLKAEKGVHRLVRISPFNANGKRQTSFA 177

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V VLPE   + D++I  ED++IDT RASG+GGQHVN T+SA+RITH+PTGI+V   SE+
Sbjct: 178 SVEVLPELTKDQDIEIRSEDLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQSER 237

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ  N+  AM +L+++L D++ +R   E+  +   ++       +IR+Y F     + DH
Sbjct: 238 SQFSNKDTAMAMLKSKLIDLK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNMVKDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           R       L  V+ G ID+ I   L  + 
Sbjct: 297 RTGEETANLNAVMNGEIDNFITAYLKNNN 325


>gi|208434124|ref|YP_002265790.1| peptide chain release factor RF-2 [Helicobacter pylori G27]
 gi|238054481|sp|B5Z9U4|RF2_HELPG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|208432053|gb|ACI26924.1| peptide chain release factor RF-2 [Helicobacter pylori G27]
          Length = 363

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      +     +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----ETTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|108562592|ref|YP_626908.1| peptide chain release factor 2 [Helicobacter pylori HPAG1]
 gi|122386784|sp|Q1CUY8|RF2_HELPH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|107836365|gb|ABF84234.1| peptide chain release factor RF-2 [Helicobacter pylori HPAG1]
          Length = 363

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
 gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
          Length = 329

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 111/329 (33%), Positives = 169/329 (51%), Gaps = 11/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MS+    D   K  E       +  +I  Y     + +++  +I       +  +    E
Sbjct: 1   MSQENFWDDQDKAQEILKEAKMVKDRIEDYQSVIDQTEEVQMMITFTEEGDQTFEKELKE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
            +            +    L +   D  S IL I AGTGG +A  +   L RMY R+A  
Sbjct: 61  TINQLDVRV---KTMKTATLLQGQYDRFSVILSIHAGTGGLDAQDWAKMLMRMYSRWAEA 117

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + VE+L    + + G K +   I G   +  +K E GVHR+ R+   ++SG+ HTS A
Sbjct: 118 KGYGVEILDLIQDPEAGIKSVTFLIEGINAYGYLKGEKGVHRLVRISPFDSSGKRHTSFA 177

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    I+V+I   D++IDT RASG+GGQHVN TDSAVRITHIPTG++V   +++
Sbjct: 178 SVDVMPELDDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGLVVQCQNQR 237

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG-RIT 317
           SQH NR  +MK+L+A+L +++ +    +    +    QI  G    +IR+Y F+      
Sbjct: 238 SQHSNRETSMKMLKAKLIELKEREQKEKIEDLQGEYSQIAWG---SQIRSYVFNPYNLAK 294

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           DHR N  +  ++ V+ G ID  IN  LT 
Sbjct: 295 DHRTNTEMGNIQSVMDGDIDLFINEYLTW 323


>gi|289523219|ref|ZP_06440073.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503762|gb|EFD24926.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 355

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 177/348 (50%), Gaps = 15/348 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVD--AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            +  L++    +  + S     +     K+T++ + +  ++ +      + +E + L  +
Sbjct: 8   DVDTLESEIKALIDKTSSPDFWNSSDAQKVTQKLSHLQDLLGQWQKMKAEWEELEVLTEL 67

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   +  I +         ++            LL  +  D+ + IL + AG GG +A
Sbjct: 68  LNETEDEELIGEFYDKASRLRKEINSM-----EMELLLDEEYDESNAILTVHAGAGGLDA 122

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A    ++ +V+    +++ G K     I G   +  +K E G+HR+
Sbjct: 123 QDWAEMLLRMYLRWAERHNYETKVIDILPDEEAGIKYATILIKGICSYGYLKAEKGIHRL 182

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   ++S R HTS A++ V+PE   + D++I  E+IR++T RASG+GGQ+VN TDSAV
Sbjct: 183 VRISPFDSSKRRHTSFASIEVIPELPDDADIEIRPEEIRMETFRASGAGGQYVNMTDSAV 242

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGD 301
           R+ HIPTGI+V   +E+SQH NR  AM++L+A+LY+  ++            K +IG G 
Sbjct: 243 RLIHIPTGIVVTCQNERSQHMNRQVAMQLLKAKLYERRQQEKQKMLDDLHGEKKEIGWG- 301

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
              +IR+Y       + DHR   T Y ++ VL G IDD +   L   +
Sbjct: 302 --SQIRSYVLHPYTMVKDHRTGYTSYSVDAVLDGDIDDFVIAYLRMRK 347


>gi|296393116|ref|YP_003658000.1| peptide subunit release factor 1 [Segniliparus rotundus DSM 44985]
 gi|296180263|gb|ADG97169.1| peptide chain release factor 1 [Segniliparus rotundus DSM 44985]
          Length = 354

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 141/355 (39%), Positives = 207/355 (58%), Gaps = 19/355 (5%)

Query: 9   ICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + +L   +  ++ R ++      V A  K+ +  A + P+    +  +  + +    H +
Sbjct: 5   LPELIAEYESLQKRWADPSLQDDVSAAKKIGKRVAELGPVYEAHTQREAARADLAAAHEL 64

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                      +  + EV  +   I EL+  +  LL P+D  D    +LE+++G GG E+
Sbjct: 65  AELD------PEFGREEVERLTGRIHELDAALAELLAPRDPHDGDDVVLEVKSGAGGEES 118

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG--------RGVFSRMK 177
           ALF GDL RMY ++A  R+W+VEVLS +++D GG K+   +I           GV++ +K
Sbjct: 119 ALFAGDLMRMYTKFAERRRWRVEVLSMAESDLGGVKDATISIKRTGGDQSPANGVWAWLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQH 236
            E GVHRVQRVPATE+ GR+HTSAA V   PE  +     I   ++RID  R+SG GGQ 
Sbjct: 179 HEGGVHRVQRVPATESQGRIHTSAAGVLAYPEPEDAPDIVIDETELRIDVYRSSGKGGQG 238

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+PTG++V   +E+SQ QN+ RAM VL ARL  +  ++ A E ++ RK 
Sbjct: 239 VNTTDSAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARLEQLREEKAAAEAASGRKE 298

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           QI + DRSERIRTYNF + RITDHRI      L+ VL+G ++ +++ L    +A 
Sbjct: 299 QIRTVDRSERIRTYNFPENRITDHRIGYKANNLDMVLEGDLEAMLSELRLKLKAD 353


>gi|171058449|ref|YP_001790798.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
 gi|170775894|gb|ACB34033.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
          Length = 300

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 102/304 (33%), Positives = 157/304 (51%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           ++ I        +  +L+ +  D    +         + A   E+R +  ++ +  +  +
Sbjct: 2   VAAIDHLSSNLADNTELYEMSKDEGDLA-----GITAIEAEVVELRAMIEKLEFRRMFSN 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++I+AG GG+EA  +   L R Y +Y   + +K  +   S+ D  G K    
Sbjct: 57  PADPSNCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTTIEDESEGDTAGIKAATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   F  ++ E+GVHR+ R    ++SG  HTS A++ V PE  +  ++DI   D+R 
Sbjct: 117 KVEGDYAFGHLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEIDINPADVRT 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVR+THIPTGI+V     +SQH NR  A K LR+RLYD E +
Sbjct: 177 DTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFEMR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +    +    + K  +G G    +IR+Y   Q RI D R N+     + VL G +D  I 
Sbjct: 237 KRMEAQQKLEDTKTDVGWG---HQIRSYVLDQSRIKDLRTNVETSATQKVLDGDLDAFIE 293

Query: 342 PLLT 345
             L 
Sbjct: 294 ASLK 297


>gi|254521932|ref|ZP_05133987.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
 gi|219719523|gb|EED38048.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
          Length = 308

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/302 (33%), Positives = 152/302 (50%), Gaps = 12/302 (3%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           I+       +  +L  +  +   D +       ++   +  + +LE +           D
Sbjct: 4   IASVLDGLTDATELLELA-ESEQDEDTALAVVADLDKHQAHVEKLEFQRM----FSGEMD 58

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
           + +  ++I+AG GG+EA  +   L RMY R+   R WK E++  S  D  G K     + 
Sbjct: 59  NAAAFVDIQAGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVE 118

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTM 227
           G   +  +K E+GVHR+ R    ++  R HTS  +V V PE  +         D+R D  
Sbjct: 119 GDYAYGWLKTETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVY 178

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+SG+GGQHVN T+SAVRITHIPT I+V   + +SQHQNR  AMK+L A+LY++E ++  
Sbjct: 179 RSSGAGGQHVNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRN 238

Query: 287 NERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            E+ A    K  IG G    +IR Y   Q RI D R  +     + VL G +D+ +   L
Sbjct: 239 AEKDAVEATKSDIGWG---SQIRNYVLDQSRIKDLRTGIERSDTQKVLDGDLDEFVEASL 295

Query: 345 TA 346
            A
Sbjct: 296 KA 297


>gi|317179435|dbj|BAJ57223.1| peptide chain release factor 2 [Helicobacter pylori F30]
          Length = 363

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|296446781|ref|ZP_06888719.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
 gi|296255656|gb|EFH02745.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
          Length = 322

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 110/317 (34%), Positives = 162/317 (51%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   I   +  I+  ++   +  D  T++    S+++     +             E 
Sbjct: 1   MRERTQIEDQLGAIARLER---DLDDALTLVELGESENDADTEKEGIAQLEALLKDARER 57

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
           +I  L       D     +E+ +G GG+E+  +   LFRMY R+A  +K+KVEV+  +  
Sbjct: 58  QIEAL--FSGEADGNDTYIEVHSGAGGTESCDWARMLFRMYARWAERKKFKVEVIEETSG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           D+ G K     I G       K ESGVHR+ R+   +++ R HTS A+V V P    +ID
Sbjct: 116 DEAGIKSATLLIKGMNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDKID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           + +   D RIDT R+SG+GGQHVNTTDSA+RITHIP+GI+V   +E+SQH+NR  A  +L
Sbjct: 176 IQVNESDCRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVACQAERSQHKNRATAWNML 235

Query: 274 RARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+   E +     K  IG G    +IR+Y     + + D R   T      
Sbjct: 236 RARLYEMELKKREAEANAVEASKTDIGWG---HQIRSYVLQPYQLVKDLRTGHTSGTPSE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +DD +   L   
Sbjct: 293 VLDGELDDFMQASLAQR 309


>gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614]
 gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp.
           JS614]
          Length = 375

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/350 (25%), Positives = 149/350 (42%), Gaps = 6/350 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  ++   A++  +++     D     T     +S +  ++  +   +    DL  ++ 
Sbjct: 28  DLETMRAEIADLGEQVAAPDLWDDQDNATRVTGRLSALQGELDRFTALQGSVDDLAIMVE 87

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 E    A  E  A    ++     +    L     D +  I+ IR+G GG +AA 
Sbjct: 88  MA--QEEGDADALAEAEAELGRLKRSVEALEVRTLLSGEYDAREAIVTIRSGAGGVDAAD 145

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A   K+ VEV   S  ++ G K     I     +  +  E+G HR+ R
Sbjct: 146 FAEMLMRMYTRWAEQHKYPVEVFDVSYAEEAGIKSAEFAIHAPYAYGTLSVEAGTHRLVR 205

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  TS A V V+P      +++I   DIR D  R+ G GGQ VNTTDSAVR+
Sbjct: 206 ISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIRTDVFRSGGPGGQSVNTTDSAVRL 265

Query: 247 THIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           THIPTGI+V+   +        +  V+       ++K        + K  +      +++
Sbjct: 266 THIPTGIVVSCQNEKSQLQNKASAMVVLKAKLLAKKKAEEAALKKDLKGDVA-AAWGDQM 324

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ-AKMIGS 354
           R Y  +  + + D R    +   + V  G +DD I   +   + A+   +
Sbjct: 325 RNYVLNPYQMVKDLRTGYEVGNPQSVFDGDVDDFIEAGIRWRRGAEKAAA 374


>gi|292620387|ref|XP_002664272.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Danio rerio]
 gi|220679232|emb|CAX12803.1| novel protein similar to H.sapiens MTRF1L, mitochondrial
           translational release factor 1-like (MTRF1L) [Danio
           rerio]
          Length = 431

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 218/353 (61%), Gaps = 8/353 (2%)

Query: 6   HKQICDLKNRFA-EIELRMSESPSVDAYIKLTEE--YAAISPIISKISIYDQKKQEEQDL 62
              +   +  +   +    S++ +++     T+      ++ ++  I   + K++E +D+
Sbjct: 71  QDYLKKKQTEYNTSLNSINSQNQTLEDADMKTQRTNMTILAHLVHNIKKLEVKQKEMEDM 130

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D  +D E+ +LA+ E  A+  +I++L  +I  LL+P++  D    +LE+ AG GG
Sbjct: 131 QDLLKD--NDPELLELAETEKEAVLADIQDLRQKILSLLIPEEESDMSELVLEVSAGVGG 188

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA LF  ++F MY+ YAA   W  +VL ++ ++ GG +   A++SG   + ++KFE+GV
Sbjct: 189 QEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSGPLSYKKLKFEAGV 248

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           HRVQRVP TE+ GR HTS  TVA+LP+  EI   I  +D++I+T RASG+GGQHVNTTDS
Sbjct: 249 HRVQRVPKTESKGRTHTSTMTVAILPQPTEISFTINPKDLKIETKRASGAGGQHVNTTDS 308

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH+PTG +     E+SQ +N+  AMK+LRA+LY    +   + R   RKLQIG+  
Sbjct: 309 AVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLEEETSRRYQARKLQIGTRG 368

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMI 352
           RSE+IRTYNF Q RITDHRI  T++ +   LQG   ++++I  L    + + +
Sbjct: 369 RSEKIRTYNFQQDRITDHRIGKTVHDVHGFLQGEELLEEMIVFLQQFSEQESL 421


>gi|297379396|gb|ADI34283.1| peptide chain release factor 2 [Helicobacter pylori v225d]
          Length = 363

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILESVLIA 361


>gi|227112636|ref|ZP_03826292.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 293

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/297 (34%), Positives = 157/297 (52%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    D            +     ++ +  +     D   C 
Sbjct: 3   QGLEDVNGLLELAVEEDDEETFNDTTVE-----LDALENKLGQLEFRRMFSGQYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K     I G   F
Sbjct: 58  LDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAF 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   E+  
Sbjct: 178 GGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQA 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|217967791|ref|YP_002353297.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
 gi|217336890|gb|ACK42683.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
          Length = 330

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 176/318 (55%), Gaps = 7/318 (2%)

Query: 29  VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEK 88
            D   K+       + +  +I  +++ K + ++L           E ++  + ++  +EK
Sbjct: 8   WDNSEKVKPILTKFNKLQKEIESWEKLKTDIEELSEWKDLLEEGDEYKEEFEKKLKEVEK 67

Query: 89  EIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVE 148
            ++  E      ++ +D  D+ + +L + AGTGG++A  +   L RMY R+A  + ++V+
Sbjct: 68  SLKNFEI----EMVLQDPHDEANAVLSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVK 123

Query: 149 VLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP 208
           +L  S  ++ G K     I G   +  +K E GVHR+ R+   +A+ R HTS A V V+P
Sbjct: 124 ILDISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIP 183

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
           E  E  ++I  ED++I+T RA G+GGQHVN  +SAVRITHIPTGI+V   +E+SQH N+ 
Sbjct: 184 ELPESTIEIKPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKE 243

Query: 268 RAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLY 326
            A++VL+ARL ++E ++   + ++  K ++       +IR+Y F     + DHR  L + 
Sbjct: 244 MALRVLKARLEELEERKRREKIASL-KGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIG 302

Query: 327 KLEYVLQGYIDDIINPLL 344
            ++ V+ G ID  I   L
Sbjct: 303 NVQAVIDGEIDPFIEAYL 320


>gi|255716670|ref|XP_002554616.1| KLTH0F09482p [Lachancea thermotolerans]
 gi|238935999|emb|CAR24179.1| KLTH0F09482p [Lachancea thermotolerans]
          Length = 400

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 133/363 (36%), Positives = 205/363 (56%), Gaps = 15/363 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L  K+          +E  M++        +  ++++ +  ++     Y ++ +  +DL 
Sbjct: 34  LLLKRAEKYAEELKALEKWMAKGEGTFDVER-QKKFSRLCAVVDSFHRYSREIELLKDLQ 92

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ D   D  +RD AQ E+  I  ++ +  + +   LLP     D+ CILEIR G GG 
Sbjct: 93  DMMKD---DPSLRDEAQQEMAEIRPQLEKTSSSLLGQLLPPHPFADRPCILEIRPGVGGI 149

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGV 182
           EA +F  DL  MY  YA  ++WK  ++S S N+ G G  + + +I   G + +++FE+GV
Sbjct: 150 EAMIFAQDLLGMYINYAHNKRWKYHIISQSANESGSGIVDAILSIDEPGSYDKLRFEAGV 209

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGG 234
           HRVQR+PATE  GR HTS A V VLP+            +     ++IRID MRA G GG
Sbjct: 210 HRVQRIPATETKGRTHTSTAAVVVLPQMAEDNEKEAESYERTFKPDEIRIDVMRARGKGG 269

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVNTTDSAVR+TH P+GI++   +E+SQH+N+ +A  +LRARL ++E+K    +  A R
Sbjct: 270 QHVNTTDSAVRLTHYPSGIVINMQNERSQHKNKAKAFAILRARLAEIEQKAKEEKARAAR 329

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMI 352
           K Q+ + DRS+++RTYNF Q RITDHR    L+ +E ++ G  +DD+I+ +         
Sbjct: 330 KGQVSTTDRSDKVRTYNFPQNRITDHRCGFNLHDMEGIMAGERLDDVIDAMQIYDSDTRA 389

Query: 353 GSA 355
              
Sbjct: 390 KEL 392


>gi|121602405|ref|YP_989094.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
 gi|120614582|gb|ABM45183.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
          Length = 376

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 167/342 (48%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R   +  +  +    D   +      E  ++   I+ I ++ QK +E  +L  +  +  
Sbjct: 30  KRLEYLNQKAEDPSLWDNAQQAQDMMRERQSLEDSINSIELFTQKLEESIELIAMGEEER 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
               I D          +  +         +L     D     LEI AG GG+E+  +  
Sbjct: 90  DVDVIADAENTIRELKNEIDK-----RQIDILLSGEADSNDTYLEIHAGAGGTESQDWAA 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+    K KVEVL  +D ++ G K     I G   +  +K ESGVHR+ R+  
Sbjct: 145 MLLRMYIRWVEQHKMKVEVLEINDGEEAGIKSATILIKGHNAYGMIKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS A+V V P     I VD+   D+RIDT RASG+GGQHVNTTDSAVRITHI
Sbjct: 205 YDSNARRHTSFASVWVYPVVDDNIKVDVSESDVRIDTYRASGAGGQHVNTTDSAVRITHI 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERI 306
            TGI+V   +E+SQH+NR  A  +LRARLY+ E K+   E +     K +IG G    +I
Sbjct: 265 KTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAVEASKTEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R  +     + VL G +D  I   L   
Sbjct: 322 RSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDRFIEAALAQR 363


>gi|188526975|ref|YP_001909662.1| peptide chain release factor 2 [Helicobacter pylori Shi470]
 gi|238691887|sp|B2US00|RF2_HELPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|188143215|gb|ACD47632.1| peptide chain release factor 2 [Helicobacter pylori Shi470]
 gi|308061460|gb|ADO03348.1| peptide chain release factor 2 [Helicobacter pylori Cuz20]
          Length = 363

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|183981542|ref|YP_001849833.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M]
 gi|238689234|sp|B2HGJ2|RF2_MYCMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|183174868|gb|ACC39978.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M]
          Length = 371

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 162/347 (46%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L++R  ++E   S+    D   +     + +S    ++   ++ ++  +DL  +  
Sbjct: 24  DVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEELRRRLEDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEI-RELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               +        +     E +  R          L     D++  ++ IR+G GG +AA
Sbjct: 84  LAAEEEGAAAGEALAEADAEFKALRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 144 DWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K   GS     
Sbjct: 264 LTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKRIEERAELDAL-KGDGGS-SWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 322 QMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWRNRK 368


>gi|313204692|ref|YP_004043349.1| bacterial peptide chain release factor 2 (brf-2) [Paludibacter
           propionicigenes WB4]
 gi|312444008|gb|ADQ80364.1| bacterial peptide chain release factor 2 (bRF-2) [Paludibacter
           propionicigenes WB4]
          Length = 368

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 159/372 (42%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ ++  R                  E ELR       D       +   +  + 
Sbjct: 1   MITIDQLKNVLERESALRRYLDVDTKLIQIEEEELRTQVPGFWDDAKAAEAQMRKVKELK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           + ++ Y+  K    +L      +  ++   +          + +  +E       +    
Sbjct: 61  NWVTGYNAVKTAADELQLAFDFYKEEAVSEEEVDEAYRHAMELLENIE----MKNMLSHE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +++I  G GG+EA  +   LFRMY+R+   + +  E+ +  + D+ G K +   
Sbjct: 117 EDKLGAVIKIVGGAGGTEAQDWASMLFRMYQRWCERQGYACEITNLQEGDEAGIKTVTMQ 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS  +V V+P     I++++    +  D
Sbjct: 177 IEGEMAYGYLKSENGVHRLVRVSPFNAQGKRMTSFTSVYVVPLVDDTIEIEVNPGMLSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVTS---------SEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  ++ VR+ +     +              +SQ  N+  A+++L+++
Sbjct: 237 TFRSSGAGGQNVNKVETGVRLHYKFVNPVTNQPDEIVIENTESRSQFGNKDNAIRLLKSQ 296

Query: 277 LYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LY++E ++     +     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYELELEKRRAATAVVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSNVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 DIDAFIKAYLME 365


>gi|109946962|ref|YP_664190.1| peptide chain release factor 2 [Helicobacter acinonychis str.
           Sheeba]
 gi|123066315|sp|Q17YT5|RF2_HELAH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|109714183|emb|CAJ99191.1| peptide chain release factor RF-2 [Helicobacter acinonychis str.
           Sheeba]
          Length = 363

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K +   IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKVKQKLERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNALDESVELFEIA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++     D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILEHGVQKVEIEIMLSGEHDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K ESGVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|261837620|gb|ACX97386.1| peptide chain release factor RF-2 [Helicobacter pylori 51]
          Length = 363

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|167586751|ref|ZP_02379139.1| peptide chain release factor 2 [Burkholderia ubonensis Bu]
          Length = 248

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/249 (39%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V++   
Sbjct: 61  NATVKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RLY+
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +   + VL G +D
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
 gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
          Length = 371

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 154/354 (43%), Gaps = 13/354 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI---ISKISIYDQKKQEEQDLHT 64
            +  ++   A +E + +     D      +  + +S +   + K      +  +   L  
Sbjct: 25  DLGKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGLRGRIDDLGVLFE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D        +  Q      +              L     D +  ++ IRA  GG +
Sbjct: 85  LAADEGDADTQEEAEQELAAVRKALDEM-----EVRTLLSGEYDSREAVVTIRAEAGGVD 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+ F   L RMY R+A    +K E+  +S  ++ G K     +     +  +  E G HR
Sbjct: 140 ASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHTPYAYGTLSVEQGTHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +  GR  TS A V VLP       ++I   ++R+D  R+SG GGQ VNTTDSA
Sbjct: 200 LVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R+    + +A +    G    
Sbjct: 260 VRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQEKMNALKGD--GGNSW 317

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
             ++R+Y     + + D R    +   E V  G ID  +   +   + +   SA
Sbjct: 318 GNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRKQQEQQSA 371


>gi|254778885|ref|YP_003056990.1| peptide chain release factor 2 [Helicobacter pylori B38]
 gi|254000796|emb|CAX28720.1| Peptide chain release factor 2 (RF-2) [Helicobacter pylori B38]
          Length = 363

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|255327042|ref|ZP_05368118.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296]
 gi|255296259|gb|EET75600.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296]
          Length = 375

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 168/353 (47%), Gaps = 6/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  ++    ++  + +     D      +  +A+S   S+++          D+  ++ 
Sbjct: 25  DIEGIERAIEDLSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRSLSSRIDDVEVMVE 84

Query: 68  DHNSDSEIRDLAQ-IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              ++ E        +      EIR    E+  L+L     D +  ++ IR+G GG +AA
Sbjct: 85  LAEAEDEETAAELLADAERECAEIRAKLEELEVLVLLSGEYDQREAVVTIRSGAGGVDAA 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            F   L RMY R+A    +  +VL +S  ++ G K +   ++    F R+  E+G HR+ 
Sbjct: 145 DFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V V+P       ++IP  +I++D  R+SG GGQ VNTTDSAVR
Sbjct: 205 RISPFDNQGRRQTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGPGGQSVNTTDSAVR 264

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +TH+PTGI+V+  +EKSQ QNR  A++VL++RL  + +++   ++         S    +
Sbjct: 265 MTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLLRKEQEDAKKKELAGDIKAS--WGD 322

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           ++R+Y     + + D R          VL G ++  I+  +    +      S
Sbjct: 323 QMRSYVLHPYQMVKDLRTGYEEGNTSNVLDGGLNAFIDAGIRWRASGRAAEES 375


>gi|259909551|ref|YP_002649907.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
 gi|224965173|emb|CAX56705.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
          Length = 293

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 100/297 (33%), Positives = 158/297 (53%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  +   +    +         +K        + +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGE-----LEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           ++I+AG+GG+EA  +   L RMY R+A  + +K E++  SD +  G K     I G   F
Sbjct: 58  MDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAF 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++V + PE    ID++I   D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER-- 289
           GGQHVN T+SAVRITH+PT I+V   +++SQH+N+ +A K LRA+LY+ E ++   ++  
Sbjct: 178 GGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQT 237

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + + K  IG G    +IR+Y     RI D R ++     + VL G +D  I   L A
Sbjct: 238 AEDNKSDIGWG---SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|261491637|ref|ZP_05988220.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261494996|ref|ZP_05991465.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309405|gb|EEY10639.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261312763|gb|EEY13883.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 304

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 104/309 (33%), Positives = 165/309 (53%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +  I++ I   +Q  ++ + L  +  +        +           E+ +   ++ +  
Sbjct: 2   LEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVE-----ADELEKKLADLEFKR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C L+++AG+GG+EA  +   L RMY R+A  + +K E++ +SD D  G K
Sbjct: 57  MFSGPHDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKAELMEASDGDVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                ISG   +   + E+G+HR+ R    +A+   HTS +   V PE   +ID++I   
Sbjct: 117 SATVKISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFSAAFVYPEVDDDIDIEINPA 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITHIP+GI+V   + +SQHQN+ +AMK L+A+LY+
Sbjct: 177 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 236

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E  +   E+    + K  IG G    +IR+Y     RI DHR  +     + VL G +D
Sbjct: 237 LEMSKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDHRTGVEHRTTQQVLDGDLD 293

Query: 338 DIINPLLTA 346
             +   L A
Sbjct: 294 KFVEASLKA 302


>gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
           15579]
 gi|187774165|gb|EDU37967.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
           15579]
          Length = 325

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 173/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   +SK +      ++   L  ++ + + D     L+
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIEDIIGLSQMLSEEDDDMGKEILS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEEIDRFKIE------TLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + V+++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITHIPTGI+V   
Sbjct: 175 SFASIEVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL++RL +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSRLVELK-ERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDAVMNGDINIFIIEYLK 322


>gi|317013590|gb|ADU81026.1| peptide chain release factor 2 [Helicobacter pylori Gambia94/24]
          Length = 363

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSTKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|269792424|ref|YP_003317328.1| peptide chain release factor 2 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100059|gb|ACZ19046.1| bacterial peptide chain release factor 2 (bRF- 2)
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 374

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/352 (29%), Positives = 178/352 (50%), Gaps = 15/352 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVD--AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            +  L  +  E+  R+S     +     ++  E + +       S  +++ ++ + L  +
Sbjct: 25  DLEGLDRKIGELMERVSSDGFWEREDSTEVARELSQLQQRRESFSALEREMEDLETLAEL 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     +   R+           E+         L L  +  D    I+ I AG GG ++
Sbjct: 85  LQAGEDEDLSREF-----YDRAAEMERRLERTQVLTLLDEEYDRSDAIVGIHAGAGGLDS 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L+RMY R+A    +KV VL    + + G K +   +SG   +  +K E GVHR+
Sbjct: 140 QDWAEMLYRMYVRWAERNGFKVRVLDELPDQEAGIKSVTFQVSGEYAYGYLKGERGVHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ R HTS A+V V+P    +++++I  EDI++DT RASG+GGQ+VN TDSAV
Sbjct: 200 VRISPFDAAKRRHTSFASVEVMPVLPDDVEIEIRPEDIKMDTFRASGAGGQYVNMTDSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGD 301
           RITHIPTGI+V    E+SQH NR  A+++L+++L++ + +    +  A    K  I  G 
Sbjct: 260 RITHIPTGIVVSCQVERSQHMNRATALQMLKSKLFERQLRERQEQLEAIQGEKRAISWG- 318

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
              +IR+Y     + + DHR    +  ++ VL G +DD++   L  ++   +
Sbjct: 319 --SQIRSYTLQPFQLVKDHRSGCEIGNVQAVLDGDLDDLMMAYLKFYKTGRL 368


>gi|308183967|ref|YP_003928100.1| peptide chain release factor 2 [Helicobacter pylori SJM180]
 gi|308059887|gb|ADO01783.1| peptide chain release factor 2 [Helicobacter pylori SJM180]
          Length = 363

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  ERIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K ESGVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|261338116|ref|ZP_05966000.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
 gi|270276738|gb|EFA22592.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
          Length = 376

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 174/354 (49%), Gaps = 11/354 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+++ A++E   +E    D      +  + +S + S++           D+ T++ 
Sbjct: 25  DVNRLQSQAAQLEQEAAEPGLWDDPEHAQKVTSKLSAVQSQLKHLASAASRIDDVETLVE 84

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                +D +  D AQ EV +I  ++R++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGREEADQDTLDEAQSEVESITNDLRDMEIQTLM----DGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P   A   +++P  +IR+DT  ASG GGQ VNTT SAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPESEIRVDTYCASGPGGQGVNTTYSAV 260

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 261 RITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +++R+Y     + + D R      + + V  G ID  I   +     +   SA 
Sbjct: 319 DQMRSYVLHPYQMVKDLRTGEETSQTQAVFDGDIDAFIQAGIRWRHEQRRESAE 372


>gi|255542882|ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
 gi|223548465|gb|EEF49956.1| peptide chain release factor, putative [Ricinus communis]
          Length = 550

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 19/352 (5%)

Query: 6   HKQI--CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQ 60
            K++    L  R   + +++++    D  +   K++ E+ ++     +++ ++++  E  
Sbjct: 150 KKRLQWKKLMVRLDLLSVQLNKPDLWDDPVLAGKISREHGSLMAKRKEVTAFERELLEHI 209

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           D+  +  + +      +  +                     L     D  SC +E+++G 
Sbjct: 210 DMIKLAREEDDAELESESLKALFHMRRNSKE-----KELEALLAGEQDSCSCYIEVQSGA 264

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG+E+  +   + +MY+ +A  R + V V+     +  G K     + G   F   K E 
Sbjct: 265 GGTESMDWAKMVMQMYKLWAQRRGYNVTVVDEMPGEIAGIKRATIKVDGEYAFGYAKAEV 324

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           GVHR+ R+   ++  R HTS A VAV+P        V I   D+RI+  R+ G GGQH N
Sbjct: 325 GVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTHVQINESDLRIERYRSGGPGGQHAN 384

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL-- 295
           TT+SAVRI HIPTG+     +E+SQH N+  AM VL++RL  +E  R A   + + +   
Sbjct: 385 TTESAVRIVHIPTGVTATCQNERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQSLT 444

Query: 296 QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +I  G+   +IRTY     R + D R N  +   + VL+G ID  I   L+A
Sbjct: 445 EISWGN---QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGEIDGFILSYLSA 493


>gi|288575018|ref|ZP_06393375.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570759|gb|EFC92316.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 336

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 17/340 (5%)

Query: 15  RFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           R  EI   M+       D   +++ + A +   IS       + Q+   L  ++ + +  
Sbjct: 7   RLHEI---MALPDFWGRDDAQRISTDLARLESRISSWDRMSSEYQDLVVLAELLDEEDDQ 63

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
               +         +          +  LL     D  + I+ + AG+GG ++  +   L
Sbjct: 64  ELEAEFFSRSESLSKSMDA-----FSMELLLNGDYDGNNAIMTVHAGSGGLDSQDWAEML 118

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
           +RMY R+     +K ++L    +++GG K +   + G   +  ++ E GVHR+ R+   +
Sbjct: 119 YRMYLRWCESNHYKTKILDYQRDEEGGIKTVTLLVEGDFAYGYLQSEVGVHRLVRISPFD 178

Query: 193 ASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
            + R HTS A+V V      +++VDI  ED+RIDT RASG+GGQHVN TDSAVRITHIPT
Sbjct: 179 TAKRRHTSFASVDVAPELPDDVEVDIRTEDLRIDTFRASGAGGQHVNMTDSAVRITHIPT 238

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR-KLQIGSGDRSERIRTY 309
           GI+V   +E+SQH N+  AM+VLR +LY+       +   +   K +I  G+   +IR+Y
Sbjct: 239 GIVVSCQNERSQHMNKAVAMQVLRGKLYERSMSERQDTLDSLHDKKEISWGN---QIRSY 295

Query: 310 NFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
                  + DHR          VL G ++  I   L   +
Sbjct: 296 VLHPYTMVKDHRTGEETGNAAAVLDGDLERFILSYLRWRK 335


>gi|161524328|ref|YP_001579340.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|189350916|ref|YP_001946544.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|160341757|gb|ABX14843.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|189334938|dbj|BAG44008.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
          Length = 248

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 100/249 (40%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V+I   
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RLY+
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +   + VL G +D
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|296435987|gb|ADH18161.1| peptide chain release factor 2 [Chlamydia trachomatis G/9768]
 gi|296437848|gb|ADH20009.1| peptide chain release factor 2 [Chlamydia trachomatis G/11074]
 gi|297140348|gb|ADH97106.1| peptide chain release factor 2 [Chlamydia trachomatis G/9301]
          Length = 334

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 108/334 (32%), Positives = 173/334 (51%), Gaps = 11/334 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +  +    D  ++  +    I+ +  ++S +++ K +   +   + D  S  ++    
Sbjct: 2   EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V  L RMY R+
Sbjct: 62  ELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A+   W++EV+   D +  G K I   + G   +   K ESGVHR+ R+   +++ + HT
Sbjct: 120 ASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHT 179

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH PTGI+V   
Sbjct: 180 SFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR   M +L AR+Y    +    +++ +RK   ++  G    +IR Y F    
Sbjct: 240 NERSQIQNREACMNMLCARIYQKLLQERLEKQNIDRKNKKEVSWG---SQIRNYVFQPYT 296

Query: 315 RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
            + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 297 LVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 330


>gi|331270416|ref|YP_004396908.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
 gi|329126966|gb|AEB76911.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
          Length = 327

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 112/331 (33%), Positives = 172/331 (51%), Gaps = 10/331 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M ES   D   K  E       +  +I  Y   K   +DL  +I     + +   + +I 
Sbjct: 1   MQESNFWDDINKAQEVTQEAKGLKDRIDKYSNTKNRLEDLKILIEMSIEEDDESSVEEIL 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               E +I   E  +  L       D  + I+ + AG GG++A  +   L RMY R++  
Sbjct: 61  NEVKEIQIIIDEFRVQIL--LSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWSET 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE L     D+ G K     I+G   +  +K E G+HR+ R+    A+G+  TS A
Sbjct: 119 KGYKVETLDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           ++ +LPE     D++I  +D+RIDT RASG+GGQH+N TDSAVRITHIPTGI+V + SE+
Sbjct: 179 SLEILPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG-RIT 317
           SQ QN+  AM +L+++L +++ +    +         +IG G    +IR+Y F     + 
Sbjct: 239 SQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWG---SQIRSYVFQPYTMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           DHR N  +  +E V+ G ID  I   L A++
Sbjct: 296 DHRTNTEMGNVEAVMDGDIDIFIIEYLKANK 326


>gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 354

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 106/353 (30%), Positives = 170/353 (48%), Gaps = 18/353 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +   R   +  +       +   +   L  E   +   +S +     +  +   L  + 
Sbjct: 11  DNALKRLHFLNDKAENPNLWEKVEEAKILMRERQHLDNAVSSLKALQDRLDDNIALLDLA 70

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N+ S +++                     +  L     D     LE+ AG GG+E+ 
Sbjct: 71  VEENNSSVLQESLDNLKQLKLDT-----EYKQFESLFSGEADSNDVYLEVHAGAGGTESQ 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R++  RK+K+++L   D ++ G K     I G   +  +K E GVHR+ 
Sbjct: 126 DWANMLVRMYIRWSERRKFKIDLLEVHDGEEAGIKSATLLIKGPNAYGWLKEEQGVHRLV 185

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS ++V V P   E  +++I   D RIDT RASG+GGQHVNTTDSAVR
Sbjct: 186 RISPYDSNSRRHTSFSSVWVYPVVDESIEIEINESDCRIDTYRASGAGGQHVNTTDSAVR 245

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITHIPTG++V    E+SQH+N+ +A  +LRA+LYD+E ++         + K +IG G  
Sbjct: 246 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYDLELQKREEIANIGESSKTEIGWG-- 303

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             +IR+Y     + + D R N+       VL G +DD +   L     K + +
Sbjct: 304 -RQIRSYVLQPYQMVKDLRTNIEKSSPLDVLNGDLDDFMKAALA--LKKQLKA 353


>gi|308063032|gb|ADO04919.1| peptide chain release factor 2 [Helicobacter pylori Sat464]
 gi|317176986|dbj|BAJ54775.1| peptide chain release factor 2 [Helicobacter pylori F16]
          Length = 363

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|329767964|ref|ZP_08259475.1| peptide chain release factor 2 [Gemella haemolysans M341]
 gi|328838449|gb|EGF88057.1| peptide chain release factor 2 [Gemella haemolysans M341]
          Length = 372

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 111/350 (31%), Positives = 185/350 (52%), Gaps = 11/350 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I + + R AEIE  M E+   +     +        I  ++  + +     +    ++ 
Sbjct: 25  KIEEKEQRVAEIENMMLEADFWNDSETASLLVTESKSIKKELDEFSEMIDYLEHSEEMVE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +  +    ++L     ++    + ++ LL  +  D+ + ILEI AG GG++A  
Sbjct: 85  FLKDEDD--EEIYQDLLETVVNLKSSVEDFSFRLLFSEEYDNNTAILEIHAGAGGTDATD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   + RMYER+   +  K   L+    D  G K     + G   +  +K E GVHRV R
Sbjct: 143 WSELMLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLLKGEKGVHRVVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   + SG+ HTS A++ V+PE  +   +++I  ED++IDT RA G+GGQH+NTTDSAVR
Sbjct: 203 ISPFDPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGGQHINTTDSAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDR 302
           ITH+PTGI+V + +E+SQ +N+  AMK L+++LY +E +    E +A R  Q  IG G  
Sbjct: 263 ITHLPTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKERELAAIRGEQKDIGWG-- 320

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y F+    + DHR N  +  ++ V+ G I D I+  L  +  + 
Sbjct: 321 -SQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYLHYNMKEK 369


>gi|134104518|pdb|2IHR|1 Chain 1, Rf2 Of Thermus Thermophilus
          Length = 365

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 15/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   + R  E+E R+ +    +      K+++E A +   +      +   Q   +L  
Sbjct: 18  DIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELME 77

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     ++   +L +      E   + L               +K+ IL I+ G GG+E
Sbjct: 78  ELPAEEREALKPELEEAAKKLDELYHQTL---------LNFPHAEKNAILTIQPGAGGTE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A  + ++VEV+  +   + G       + G   +  +  E+GVHR
Sbjct: 129 ACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAA-TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +ASGR HTS A    +     E++V +  E++RID MRASG GGQ VNTTDSA
Sbjct: 189 LVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSA 248

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V   + +SQ +N+  A+K+L+ARLY++ERK+   E  A R  ++   + 
Sbjct: 249 VRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALR-GEVRPIEW 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y   +  + DHR  L  +  E VL G + D+I   L     + 
Sbjct: 308 GSQIRSYVLDKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWKAGRR 356


>gi|311743767|ref|ZP_07717573.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
 gi|311312897|gb|EFQ82808.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
          Length = 371

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/350 (28%), Positives = 163/350 (46%), Gaps = 15/350 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHT 64
            +  ++   AE++ ++      D            + +   + K++   Q+  + + LH 
Sbjct: 25  DLDAMRKEIAELQEQVGAPDLWDDQANAQRVTGRLSVLQAEVDKVTGLRQRLDDLELLHE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D+ + D A   V   +         +    L     D +  ++ IR+G GG +
Sbjct: 85  MALEEGDDASVADAAAELVRVHKSIEA-----LEVRTLLSGEYDMRDALVSIRSGAGGVD 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AA F   L RMY R+A    + VE+   S  ++ G K     +     +  +  ESG HR
Sbjct: 140 AADFALMLQRMYIRWAERHGYTVEIYDVSYAEEAGLKSTTFAVKAPYAYGTLSVESGTHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +  GR  TS A + V+P      ++D+P E+IR+D  R+SG GGQ VNTTDSA
Sbjct: 200 LVRISPFDNQGRRQTSFAAIEVVPVLEQTDEIDVPDEEIRVDVYRSSGPGGQSVNTTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL-QIGSGD 301
           VR+THIPTG +V   +EKSQ QN+  AM +L+A+L  +++          R   Q   GD
Sbjct: 260 VRLTHIPTGTVVSCQNEKSQLQNKASAMVILKAKLLALKKAEERAHLDELRGDVQASWGD 319

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              ++R Y  +  + + D R        + VL G IDD I   +   + +
Sbjct: 320 ---QMRNYVLNPYQMVKDLRTEHESGNTQGVLDGEIDDFIEAGIRWRREQ 366


>gi|328955235|ref|YP_004372568.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium
           glomerans PW2]
 gi|328455559|gb|AEB06753.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium
           glomerans PW2]
          Length = 383

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 166/347 (47%), Gaps = 13/347 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           + + + R  E+E R +     D       + EE +     +S +     +  +      +
Sbjct: 29  LDEKRERIVELEQRSARPDFWDDGERARAVMEELSCARDDVSGVERARTRLADAVAALQL 88

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             +     E  +LA     A  +  RE+ +++          D  S I+ I+ G GG EA
Sbjct: 89  ASELEHGDEADELAAEATAAASELTREI-DQMELSSWFTGEFDHGSAIITIKPGQGGLEA 147

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   LF+MY +Y   R WKV V      D  G      T+ G+  F  ++ E+GVHR+
Sbjct: 148 QDWTFMLFKMYMKYCERRGWKVTVNDCPPADVIGIDRATFTVEGKDAFGMLRAEAGVHRL 207

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+  T+   R  T+ A V V+P    +IDV+I   DIR+D   ASG GGQ VNTTDSAV
Sbjct: 208 VRISPTDDKKRRQTTFAGVEVIPVLPDDIDVEIDPTDIRVDVYHASGPGGQGVNTTDSAV 267

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           R+TH+PTGI+V   +E+SQ QN+   M++L++RL+++E ++        R  K  IG G+
Sbjct: 268 RVTHLPTGIVVTCQNERSQIQNKAACMQILKSRLFELELEKREEALDEIRGPKHTIGFGN 327

Query: 302 RSERIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTA 346
              +IR+Y  +    + D R  +    +  VL  G +D  I      
Sbjct: 328 ---QIRSYVLYPYQMVKDLRSGVETGNVASVLEDGDLDPFIIGYHRW 371


>gi|254479978|ref|ZP_05093226.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2148]
 gi|214039540|gb|EEB80199.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2148]
          Length = 310

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 106/315 (33%), Positives = 165/315 (52%), Gaps = 12/315 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E +++  I+  I   +    +  DL  +      D +       E+ A+  ++  LE
Sbjct: 1   MGRERSSLETIVLTIEKLEGGATDAADLLEMAA-AEDDQDTLTEVISEIDALVAQLERLE 59

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
               +  +     D  +  L+I++G+GG+EA  +   + RMY R+   + +K +++ +S 
Sbjct: 60  ----FRRMFDGEMDANNAFLDIQSGSGGTEAQDWAEMMLRMYLRWGEAKGFKTQLMEASA 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            D  G K       G   F  ++ E+GVHR+ R    ++  R HTS ++V V PE  +  
Sbjct: 116 GDVAGIKSATIKFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +++I   D+R+DT RASG+GGQHVN TDSAVR+TH PTGI V   +E+SQHQNR  AMK+
Sbjct: 176 EIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHNPTGIAVQCQTERSQHQNRDNAMKL 235

Query: 273 LRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E  +   E+ A    K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LRAKLYEMEMLKRNEEKQAMEDGKADIGWG---SQIRSYVLDDARIKDLRTGVETRNTQA 292

Query: 331 VLQGYIDDIINPLLT 345
           VL G +D  I   L 
Sbjct: 293 VLDGSLDQFIEASLK 307


>gi|254447294|ref|ZP_05060761.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015]
 gi|198263433|gb|EDY87711.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015]
          Length = 300

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/304 (33%), Positives = 161/304 (52%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  +        +  DL  +  +   D E     + ++  +   +  LE    +  +   
Sbjct: 2   VRGLDRITSGLGDAGDLIEMAKEE-GDEETLAAVEDDIAELTDAVENLE----FRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D+K+  L+I+AG+GG+EA  +   L RMY R+     +K E++  S+ D  G K    
Sbjct: 57  EMDEKNAYLDIQAGSGGTEAQDWANMLLRMYLRWCDQHGFKNEIVELSEGDVAGIKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
            I G   F  ++ E+GVHR+ R    ++ GR HTS A+V + PE     D+DI   D+R+
Sbjct: 117 HIQGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFDIDINPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT R+SG+GGQHVNTTDSAVRITH P+G++V   +++SQH NR  AMK L+A+L+++E +
Sbjct: 177 DTYRSSGAGGQHVNTTDSAVRITHAPSGVVVSCQNQRSQHANRDFAMKQLKAKLWELEMQ 236

Query: 284 RMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +     + + + K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 237 KRNAVKQEAEDNKADIGWG---SQIRSYVLDASRIKDLRTGVETGNTQAVLDGSLDPFIE 293

Query: 342 PLLT 345
             L 
Sbjct: 294 ASLK 297


>gi|134296298|ref|YP_001120033.1| peptide chain release factor 2 [Burkholderia vietnamiensis G4]
 gi|134139455|gb|ABO55198.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           vietnamiensis G4]
          Length = 248

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/249 (39%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V++   
Sbjct: 61  NATIKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RLY+
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +   + VL G +D
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|225450605|ref|XP_002277995.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 434

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 106/354 (29%), Positives = 169/354 (47%), Gaps = 19/354 (5%)

Query: 4   LSHKQI--CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           L  K++    L  R   +  ++++    D  +   K++ E+  +   +  +   +Q+  E
Sbjct: 78  LIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLE 137

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             D+  +  + N      +  +  +                  L     D  SC +E++A
Sbjct: 138 HIDMVKLAREENDPELESESLKALLGMRRNSKE-----KELEALLAGDHDSCSCYIEVQA 192

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG+E+  +   + +MY+ +A  R + V V+     +  G K     + G   F   K 
Sbjct: 193 GAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKA 252

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQH 236
           E GVHR+ R+   ++  R HTS A VAV+P    A   V I   D+RI+  RA G+GGQH
Sbjct: 253 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQH 312

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTT+SAVRI HIPTG+     +E+SQHQN+  AM VL++RL  +E  R A   + + + 
Sbjct: 313 VNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQS 372

Query: 296 --QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              I  G+   +IRTY     R + D R N  +   + VL+G +D  I   L+A
Sbjct: 373 LTDISWGN---QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 423


>gi|168185950|ref|ZP_02620585.1| peptide chain release factor 2 [Clostridium botulinum C str.
           Eklund]
 gi|169295927|gb|EDS78060.1| peptide chain release factor 2 [Clostridium botulinum C str.
           Eklund]
          Length = 326

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 107/331 (32%), Positives = 173/331 (52%), Gaps = 10/331 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M ES   D   K  E       +  +I  Y+  K   +DL  +I     + +   + +I 
Sbjct: 1   MQESDFWDDINKAQEITQEAKGLKDRIDGYNNTKTRIEDLEVLIEISIEEEDESSIEEIL 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               E EI    ++    +L     D  + I+ + +G GG++A  +   L RMY R+A  
Sbjct: 61  NEIKEIEIII--DDFKVQILLSGEYDKNNAIVSLHSGAGGTDAQDWTEMLLRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KV+ +     D+ G K     I+G   +  +K E G+HR+ R+    A+G+  TS A
Sbjct: 119 KGYKVDTIDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           ++ V+PE     D++I  +D+R+DT RASG+GGQH+N TDSAVRITHIPTGI+V + SE+
Sbjct: 179 SLEVIPELRENQDIEIKADDLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG-RIT 317
           SQ QN+  AM +L+++L +++ +    +         +IG G    +IR+Y F     + 
Sbjct: 239 SQFQNKDTAMSMLKSKLIELKERAHKEKIEDLSGDLKEIGWG---SQIRSYVFQPYTMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           DHR N  +  ++ V+ G ID+ I   L  + 
Sbjct: 296 DHRTNTEMGNVDAVMDGDIDNFILQYLKFNN 326


>gi|210134369|ref|YP_002300808.1| peptide chain release factor 2 [Helicobacter pylori P12]
 gi|238054483|sp|B6JPR7|RF2_HELP2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|210132337|gb|ACJ07328.1| peptide chain release factor RF-2 [Helicobacter pylori P12]
          Length = 363

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  N      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNSTKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|317010450|gb|ADU84197.1| peptide chain release factor 2 [Helicobacter pylori SouthAfrica7]
          Length = 363

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEALVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K ESGVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|256820726|ref|YP_003142005.1| peptide chain release factor 2 [Capnocytophaga ochracea DSM 7271]
 gi|256582309|gb|ACU93444.1| bacterial peptide chain release factor 2 (bRF- 2) [Capnocytophaga
           ochracea DSM 7271]
          Length = 367

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 173/364 (47%), Gaps = 28/364 (7%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
             +++Q+ DL NR   +                E +       D   +  +    +    
Sbjct: 1   MTNNEQVKDLVNRLGALRRYFDVDAKRIEISNEEEKTFAPDFWDNAKEAEKVMRELRTKK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  Y++ +    D+  ++          +    +       I  LE    +  +  D 
Sbjct: 61  KWVEDYEEAENLTSDIEVLLDFFKEGEATAEDVDHQYTQALHAIEALE----FRNMLSDE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D  S +L+I AG GG+E+  +   L RMY  +   +K+KV+ L+  + D  G K +   
Sbjct: 117 GDTMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGVKTVTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++DI   DI  +
Sbjct: 177 IEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADITFE 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
           TMR+SG+GGQ+VN  ++AVR+ H PTGI++  S  +SQ  N+ +A+++L+++LY++E K+
Sbjct: 237 TMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKK 296

Query: 285 MANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341
              +R      K++I  G    +IR Y     + + D R N     ++ V+ G +D+ + 
Sbjct: 297 RQAKRDEIEAGKMKIEWG---SQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDEFLK 353

Query: 342 PLLT 345
             L 
Sbjct: 354 AYLM 357


>gi|153854560|ref|ZP_01995830.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814]
 gi|149752869|gb|EDM62800.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814]
          Length = 312

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 164/313 (52%), Gaps = 9/313 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +  ++  I       ++   L  +  +    + +++L +           ++  
Sbjct: 1   MKELKNLKELVETIHGLYTSYEDINLLIEMGYEDEDPAMVKELEEEIH-----TFEKVFE 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
           ++    L     D  + I+ I AG GG+E+  + G L+RMY R+A  + + ++VL   D 
Sbjct: 56  KLKIQTLLSGEYDACNAIMTIHAGAGGTESCDWAGMLYRMYCRWAERKGFSLQVLDFLDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           D  G K +   + G   +  +K E GVHR+ R+    ++G+  TS A+  VLP    +ID
Sbjct: 116 DIAGIKAVTFEVKGENAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVLPDLEDDID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I  +D++IDT RASG+GGQHVN T SA+RITH+PTGI+V   +E+SQH N+ +AM++L
Sbjct: 176 IEIDEDDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQML 235

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVL 332
           +A+L  ++ +  A + S  R  ++       +IR+Y       + DHR N     +  V+
Sbjct: 236 KAKLQLMKEQEQAEKVSDIR-GEVKDIGFGNQIRSYVMQPYTLVKDHRTNEENSNVNAVM 294

Query: 333 QGYIDDIINPLLT 345
            G ID  IN  L 
Sbjct: 295 DGDIDSFINAYLK 307


>gi|121587849|ref|ZP_01677606.1| peptide chain release factor 2 [Vibrio cholerae 2740-80]
 gi|121728386|ref|ZP_01681414.1| peptide chain release factor 2 [Vibrio cholerae V52]
 gi|147673826|ref|YP_001216157.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|153216950|ref|ZP_01950714.1| peptide chain release factor 2 [Vibrio cholerae 1587]
 gi|153801991|ref|ZP_01956577.1| peptide chain release factor 2 [Vibrio cholerae MZO-3]
 gi|153818695|ref|ZP_01971362.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457]
 gi|153822281|ref|ZP_01974948.1| peptide chain release factor 2 [Vibrio cholerae B33]
 gi|153826509|ref|ZP_01979176.1| peptide chain release factor 2 [Vibrio cholerae MZO-2]
 gi|153829166|ref|ZP_01981833.1| peptide chain release factor 2 [Vibrio cholerae 623-39]
 gi|227080844|ref|YP_002809395.1| peptide chain release factor 2 [Vibrio cholerae M66-2]
 gi|229505715|ref|ZP_04395225.1| peptide chain release factor 2 [Vibrio cholerae BX 330286]
 gi|229508711|ref|ZP_04398204.1| protein chain release factor B [Vibrio cholerae B33]
 gi|229512924|ref|ZP_04402391.1| peptide chain release factor 2 [Vibrio cholerae TMA 21]
 gi|229519540|ref|ZP_04408983.1| peptide chain release factor 2 [Vibrio cholerae RC9]
 gi|229520954|ref|ZP_04410376.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80]
 gi|229530470|ref|ZP_04419858.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)]
 gi|229608734|ref|YP_002879382.1| protein chain release factor B [Vibrio cholerae MJ-1236]
 gi|254226529|ref|ZP_04920112.1| peptide chain release factor 2 [Vibrio cholerae V51]
 gi|255743877|ref|ZP_05417833.1| peptide chain release factor 2 [Vibrio cholera CIRS 101]
 gi|262156096|ref|ZP_06029215.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1]
 gi|262169962|ref|ZP_06037652.1| peptide chain release factor 2 [Vibrio cholerae RC27]
 gi|262191216|ref|ZP_06049415.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93]
 gi|121547885|gb|EAX57969.1| peptide chain release factor 2 [Vibrio cholerae 2740-80]
 gi|121629320|gb|EAX61752.1| peptide chain release factor 2 [Vibrio cholerae V52]
 gi|124114015|gb|EAY32835.1| peptide chain release factor 2 [Vibrio cholerae 1587]
 gi|124122450|gb|EAY41193.1| peptide chain release factor 2 [Vibrio cholerae MZO-3]
 gi|125620933|gb|EAZ49284.1| peptide chain release factor 2 [Vibrio cholerae V51]
 gi|126510775|gb|EAZ73369.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457]
 gi|126520177|gb|EAZ77400.1| peptide chain release factor 2 [Vibrio cholerae B33]
 gi|146315709|gb|ABQ20248.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|148875355|gb|EDL73490.1| peptide chain release factor 2 [Vibrio cholerae 623-39]
 gi|149739689|gb|EDM53896.1| peptide chain release factor 2 [Vibrio cholerae MZO-2]
 gi|227008732|gb|ACP04944.1| peptide chain release factor 2 [Vibrio cholerae M66-2]
 gi|227012488|gb|ACP08698.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|229332243|gb|EEN97731.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)]
 gi|229342187|gb|EEO07183.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80]
 gi|229344229|gb|EEO09204.1| peptide chain release factor 2 [Vibrio cholerae RC9]
 gi|229350173|gb|EEO15126.1| peptide chain release factor 2 [Vibrio cholerae TMA 21]
 gi|229354235|gb|EEO19165.1| protein chain release factor B [Vibrio cholerae B33]
 gi|229357938|gb|EEO22855.1| peptide chain release factor 2 [Vibrio cholerae BX 330286]
 gi|229371389|gb|ACQ61812.1| protein chain release factor B [Vibrio cholerae MJ-1236]
 gi|255738508|gb|EET93897.1| peptide chain release factor 2 [Vibrio cholera CIRS 101]
 gi|262021696|gb|EEY40407.1| peptide chain release factor 2 [Vibrio cholerae RC27]
 gi|262030132|gb|EEY48777.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1]
 gi|262032918|gb|EEY51457.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93]
 gi|327483462|gb|AEA77869.1| Peptide chain release factor 2 [Vibrio cholerae LMA3894-4]
          Length = 299

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I   D+   + + L  +  +   D E  D    E+  +E ++ +LE    +  +   
Sbjct: 1   MDTIDQLDRGVDDVEGLLELAIEAE-DQETFDEIGPELDELEAKLEQLE----FRRMFSG 55

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C L+++AG+GG+EA  +   L RMY R+A  + +K EV+  S+ D  G K    
Sbjct: 56  DHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATV 115

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            I G   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE  E  D++I   D+RI
Sbjct: 116 RIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRI 175

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E +
Sbjct: 176 DVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQ 235

Query: 284 RMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 236 KQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIE 292

Query: 342 PLLT 345
             L 
Sbjct: 293 ASLK 296


>gi|319935038|ref|ZP_08009481.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
 gi|319810056|gb|EFW06425.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
          Length = 371

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 173/342 (50%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  LK     + ++  +    +   +  + Y  ++ +      YD       DL     
Sbjct: 25  DIEGLKREIEGLTVQTLDEHFWNNQEQAKKIYNQLNEMKKTTDTYDDLVSSLNDLDETY- 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D+  ++E  D  +      E   + L +    LL   + D   + I+EI  G GG+E+  
Sbjct: 84  DYVKETEDTDFKEALDQDYELFEKHLNDFEKTLLFSGEYDHH-NAIVEIHPGAGGTESQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY+RY   + +KVEVL   D ++ G K +     G   +  +K E GVHR+ R
Sbjct: 143 WAAMLMRMYQRYGDKKDFKVEVLDYLDGEEAGLKSVTLRFIGYNAYGHLKAEKGVHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   ++S R HTS A+V V+PE     +++I   D+RIDT RASG+GGQH+N TDSA+RI
Sbjct: 203 ISPFDSSKRRHTSFASVDVMPEFDNDIEIEIDQNDLRIDTYRASGAGGQHINKTDSAIRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           THIPT I+V   S++SQ QNR +A+ +L+++LY V  +  A++ S  +  Q    +   +
Sbjct: 263 THIPTHIVVTCQSQRSQIQNREQALIMLKSKLYQVMLEEQASKLSDIKGEQKA-IEWGSQ 321

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y       + D+R        + +L G +DD I   L A
Sbjct: 322 IRSYVLHPYSMVKDNRSGYESNNPKAILDGDLDDCIYAYLKA 363


>gi|254251975|ref|ZP_04945293.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
 gi|124894584|gb|EAY68464.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
          Length = 248

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 99/249 (39%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ++G   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V+I   
Sbjct: 61  NATIKVTGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RLY+
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +   + VL G +D
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|167581337|ref|ZP_02374211.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis TXDOH]
 gi|167619419|ref|ZP_02388050.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis Bt4]
 gi|257138616|ref|ZP_05586878.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
          Length = 248

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 99/249 (39%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V+I   
Sbjct: 61  NATIKVSGDYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RL++
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +   + VL G +D
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|15644800|ref|NP_206970.1| peptide chain release factor 2 [Helicobacter pylori 26695]
 gi|2500142|sp|P55999|RF2_HELPY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2313254|gb|AAD07236.1| peptide chain release factor RF-2 (prfB) [Helicobacter pylori
           26695]
          Length = 363

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILENSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  R+SG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRSSGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
 gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
          Length = 333

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 103/319 (32%), Positives = 162/319 (50%), Gaps = 13/319 (4%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +A  KL  E   ++  I  +   +    +  +L  +       + + +         
Sbjct: 3   NDAEAAQKLMRERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEAVAGLRALA 62

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           E+             L     D   C LE+ AG GG+EA  +   L RMY R+A    +K
Sbjct: 63  EEA-----KRRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
           V ++ SS+ +  G K     +SG   +  +K E+GVHR+ R+   +A+ R  TS A+V V
Sbjct: 118 VTMMESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWV 177

Query: 207 LP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            P     I+++I   D+R+DT RASG+GGQHVN T+SA+RITHIPTGI+V   +++SQH+
Sbjct: 178 YPVVDDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHR 237

Query: 265 NRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRI 321
           NR  AM +L+AR+Y+ E ++     +     K  IG G    +IR+Y  +  + + D R 
Sbjct: 238 NRATAMTMLKARMYEQELQKREAAAAQTEANKTDIGWG---HQIRSYVLAPYQLVKDLRT 294

Query: 322 NLTLYKLEYVLQGYIDDII 340
           N+     + +L G IDD +
Sbjct: 295 NVEKTNPDAILDGDIDDFM 313


>gi|50286945|ref|XP_445902.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525208|emb|CAG58821.1| unnamed protein product [Candida glabrata]
          Length = 405

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 142/367 (38%), Positives = 219/367 (59%), Gaps = 20/367 (5%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L  K++  +    AE+E ++S     D    +  +Y ++  +      Y ++    ++L 
Sbjct: 45  LLLKRVSGVSKELAELEKQISNGYDED----VQRKYNSLMSLQDVYDRYKEQLGNYRELK 100

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I   + D  + + A  E+  +   +++   ++ + L+P     +K+C+LE+R G GGS
Sbjct: 101 EMI---DVDKSLAEEAAAELHELVPNLKKTTQDLLHRLIPPHPFAEKACMLELRPGVGGS 157

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGV 182
           EA +F  DL  MY  YA  +KWK  ++S  +N+ G G  + V  I   G ++ +K+E+GV
Sbjct: 158 EAMIFAKDLLNMYIGYAHNKKWKHHIVSIRENEAGSGIMDAVLAIDEPGTYNILKYEAGV 217

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-------IPLEDIRIDTMRASGSGGQ 235
           HRVQR+PATE+ GR HTS A V VLP+  +   D          E+IRID  RASG GGQ
Sbjct: 218 HRVQRIPATESKGRTHTSTAAVVVLPQLGDEGKDLDAFERSFKPEEIRIDVKRASGKGGQ 277

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTT+SAVR+THIPTGIM+    E+SQH+N+ +A  +LR++L ++E+++ A +    RK
Sbjct: 278 HVNTTESAVRLTHIPTGIMIHMQDERSQHRNKAKAFSILRSKLAELEQQQKAEKERQVRK 337

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH---QAK 350
            Q+ + DRS++IRTYNFSQ RITDHR  L LY LE V+ G  +DD+IN + +     QA+
Sbjct: 338 EQVTTMDRSDKIRTYNFSQNRITDHRCGLNLYDLEGVISGERLDDVINAVRSFDDNIQAE 397

Query: 351 MIGSASE 357
            I   ++
Sbjct: 398 SIIETNQ 404


>gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 332

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 106/331 (32%), Positives = 171/331 (51%), Gaps = 6/331 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D   K  +  +  + +  K   +   K++  D  T +     +++       E
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRLEADADLQKDTE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               + +     ++    LL     DD + ++EI  G GG+EA  +   L RMY+RY   
Sbjct: 61  DQLAKLQEEF--HQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDS 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R  K EV +    D+ G K +   ISG+  +  +K E GVHR+ R+   +++ R HTS A
Sbjct: 119 RGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
           +V V+PE    I++DI  +D+RID  R+SG+GGQH+N T SAVRITHIPTGI+  + +++
Sbjct: 179 SVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QNR  AM  +RA+L+ +E ++   E++A +  Q+       +IR+Y F     + DH
Sbjct: 239 SQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQL-DIAWGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R       +  V+ G +D  I   L    ++
Sbjct: 298 RTGYETADVGGVMDGKLDPFIYAYLQWRLSQ 328


>gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547]
 gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus
           sedentarius DSM 20547]
          Length = 370

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 173/350 (49%), Gaps = 15/350 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK + A++E + S     D      +  AA+S +  ++   +       DL  ++ 
Sbjct: 24  DLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIESMDSRIDDLEVLVE 83

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D+E    A  E+ AI+  + +LE       L     D++  ++ IRAG GG +A
Sbjct: 84  MGTEEGDAETLAEATKELAAIQAAVEKLEV----RTLLSGEYDEREAVITIRAGAGGVDA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A   ++  +VL +S  ++ G K +   ++    +  +  E G HR+
Sbjct: 140 ADFAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNLVVEGGTHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P       ++IP  +I++D  R+SG GGQ VNTTDSAV
Sbjct: 200 VRISPYDNQGRRQTSFAAVEVVPVIEQTDSIEIPENEIKVDVFRSSGPGGQSVNTTDSAV 259

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GD 301
           R+THIPTGI+V+  +EKSQ QNR  A++VL++RL      +   E +A RK   G     
Sbjct: 260 RMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLL----QRKAEEAAERKELAGDIKAS 315

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             +++R+Y     + + D R    +   + V  G ID  I   +   + +
Sbjct: 316 WGDQMRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWKRGQ 365


>gi|167837158|ref|ZP_02464041.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis MSMB43]
          Length = 248

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 98/249 (39%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V++   
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RL++
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +   + VL G +D
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|118617904|ref|YP_906236.1| peptide chain release factor 2 [Mycobacterium ulcerans Agy99]
 gi|166225111|sp|A0PQZ6|RF2_MYCUA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118570014|gb|ABL04765.1| peptide chain release factor 2 PrfB [Mycobacterium ulcerans Agy99]
          Length = 371

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 163/347 (46%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L++R  ++E   S+    D   +     + +S    ++   ++ ++  +DL  +  
Sbjct: 24  DVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEELRRRLEDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEV-LAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               +        +    A  K +R          L     D++  ++ IR+G GG +AA
Sbjct: 84  LAAEEEGAAAGEALTEADAEFKALRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 144 DWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V   +EKSQ QN++ AM+VL+A+L + +R     E  A  K   GS     
Sbjct: 264 LTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKRIEERAELDAL-KGDGGS-SWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R    +     VL G ID  +   +     K
Sbjct: 322 QMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWRNRK 368


>gi|110597266|ref|ZP_01385554.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031]
 gi|110341102|gb|EAT59570.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031]
          Length = 363

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 15/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ---DLHT 64
            +   K +  ++E   ++    +   +  +    ++   +    Y++   +E+   D   
Sbjct: 23  DVDQRKEKVEDLEKITADPAFWNDQKEAHKILKELNEHKTWTEGYEKLAAKEKVCLDELE 82

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   +S   +L+         EI +    I +  +    DD  + ++ I AG GG+E
Sbjct: 83  IASELEDESFSDELSTA-----IAEIEQEIAAIEFKNMLSGKDDAGNALITIHAGAGGTE 137

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L+RMY R+A  + +K+      + D  G K     I G   +  +K E+GVHR
Sbjct: 138 AQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIQGAYAYGYLKAENGVHR 197

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + RV   +++ R HTS A+V   PEA    ++++  ED+ + T R+ G GGQ+VN  ++A
Sbjct: 198 LVRVSPYDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVETA 257

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSG 300
           VRI H+PTGI+V    E+SQ QNR RAMK+L A+LY  +R+    ++     +K +I  G
Sbjct: 258 VRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKKIEWG 317

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y     RI DHR N   + +E VL G +D+ +   L+ 
Sbjct: 318 ---SQIRSYVLDDRRIKDHRTNYERFDVETVLDGDLDEFMEHYLSE 360


>gi|42522998|ref|NP_968378.1| hypothetical protein Bd1489 [Bdellovibrio bacteriovorus HD100]
 gi|39575203|emb|CAE79371.1| prfB [Bdellovibrio bacteriovorus HD100]
          Length = 321

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 95/316 (30%), Positives = 165/316 (52%), Gaps = 9/316 (2%)

Query: 33  IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRE 92
            KL +E A +   + +   +  +  + + L  +  +   +    +     V   +     
Sbjct: 2   QKLNKEKALLEKAVGEFDAFASRLSDSKVLLEMAEEAQDEGSFSEAKAEVVALEKLGEE- 60

Query: 93  LENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSS 152
               +    +     D  S  L I +G GG+E+  +   L RMY RYA    +KV+++  
Sbjct: 61  ----LELKRVLNGELDSNSSYLSINSGAGGTESCDWASMLLRMYTRYADKHGFKVQIIEM 116

Query: 153 SDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVL-PEAA 211
           ++ +  G K     I G   +  +K ESGVHR+ R+   +++ R HTS A+V        
Sbjct: 117 TEGEGAGIKSCTLLIEGPYAYGYLKAESGVHRLVRISPFDSNARRHTSFASVFAWAEVDD 176

Query: 212 EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAM 270
           +I++++  +D+++DT RASG+GGQHVN TDSAVR+THIP+G++V    E+SQ QNR +A+
Sbjct: 177 DINIEVRPDDLKVDTFRASGAGGQHVNRTDSAVRMTHIPSGVIVTCQVERSQIQNREKAL 236

Query: 271 KVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           K+L+ARLY++E ++   E+ A    Q  + +   +IR+Y     + + DHR +    +++
Sbjct: 237 KMLKARLYEMEIEKRNAEKDAMN-SQKKANEWGSQIRSYVMHPYQMVKDHRTDFETNQVD 295

Query: 330 YVLQGYIDDIINPLLT 345
            V+ G +D  I   L 
Sbjct: 296 DVMDGDLDGFIMSYLK 311


>gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199]
 gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199]
          Length = 322

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 107/317 (33%), Positives = 160/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +   + +++  +Q  ++   L  +      D+ + D  +       K       
Sbjct: 1   MQERTRLEKQLGEVNQLNQGLEDALMLIELGETEGDDATVADAEKELEAIRVKAESM--- 57

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D   C LE+ AG GG+EA  +   L RMY R++  R +KVE L  S  
Sbjct: 58  --QIESLLSGEADANDCYLEVHAGAGGTEAQDWAEMLLRMYTRWSERRGFKVEWLEESQG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV 215
           ++ G K     ISG   +  +K ESGVHR+ R+   ++  R HTS ++  V P   +   
Sbjct: 116 EEAGLKSATVKISGHNAYGWLKIESGVHRLVRISPYDSQARRHTSFSSAWVYPVIDDSID 175

Query: 216 D-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
             +  +D+++DT RASG+GGQHVN TDSA+RITH+P+GI+V   +++SQH+NR  AM++L
Sbjct: 176 IVVEDKDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +ARLY+ E KR   E SA    K  IG G    +IR+Y     + + D R N        
Sbjct: 236 KARLYEAELKRREEEASATEATKSDIGWG---HQIRSYVLQPYQMVKDLRTNEESSNPAA 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G ID  +   L A 
Sbjct: 293 VLDGDIDAFLEAALAAR 309


>gi|317495961|ref|ZP_07954323.1| peptide chain release 2 [Gemella moribillum M424]
 gi|316913865|gb|EFV35349.1| peptide chain release 2 [Gemella moribillum M424]
          Length = 372

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 111/350 (31%), Positives = 189/350 (54%), Gaps = 11/350 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I + + R AEIE  M ++   +     +        I  ++  +            +I 
Sbjct: 25  KIEEKEQRVAEIENMMLDADFWNDSETASTLVTESKSIKKELDEFSAMLDYLNHSEEMIE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             N + +  +    E++   +++++   + ++ LL  +  D+ + ILEI AG GG++A  
Sbjct: 85  FLNDEDD--EEIYQELIETVRDLKQQVEDFSFRLLFAEEYDNNTAILEIHAGAGGTDATD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   + RMYER+ + +      L+    D  G K     I G   +  +K E GVHRV R
Sbjct: 143 WAEIMLRMYERFFSKQGLTYSYLNYQSGDITGVKSATLKIEGDFAYGLLKGEKGVHRVVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   + SG+ HTS A++ V+PE ++   +++I +ED++IDT RA G+GGQH+NTTDSAVR
Sbjct: 203 ISPFDPSGKRHTSFASIDVIPEFSDEEANIEINIEDLKIDTYRAQGAGGQHINTTDSAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDR 302
           ITH+PTGI+V + +E+SQ +NR  AMK L+++L+ +E +    E ++ R  Q  IG G  
Sbjct: 263 ITHLPTGIVVQSQAERSQIKNRDFAMKNLKSKLHQLELEEKERELASIRGEQKDIGWG-- 320

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y F+    + DHR N  +  ++ V+ G I D I+  L  +  + 
Sbjct: 321 -SQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYLHYNIKQK 369


>gi|147834602|emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 106/354 (29%), Positives = 169/354 (47%), Gaps = 19/354 (5%)

Query: 4   LSHKQI--CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQE 58
           L  K++    L  R   +  ++++    D  +   K++ E+  +   +  +   +Q+  E
Sbjct: 70  LIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLE 129

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
             D+  +  + N      +  +  +                  L     D  SC +E++A
Sbjct: 130 HIDMVKLAREENDPELESESLKALLGMRRNSKE-----KELEALLAGDHDSCSCYIEVQA 184

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG+E+  +   + +MY+ +A  R + V V+     +  G K     + G   F   K 
Sbjct: 185 GAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKA 244

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQH 236
           E GVHR+ R+   ++  R HTS A VAV+P    A   V I   D+RI+  RA G+GGQH
Sbjct: 245 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQH 304

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTT+SAVRI HIPTG+     +E+SQHQN+  AM VL++RL  +E  R A   + + + 
Sbjct: 305 VNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQS 364

Query: 296 --QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              I  G+   +IRTY     R + D R N  +   + VL+G +D  I   L+A
Sbjct: 365 LTDISWGN---QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 415


>gi|150004050|ref|YP_001298794.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482]
 gi|254882894|ref|ZP_05255604.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA]
 gi|294778088|ref|ZP_06743522.1| peptide chain release factor 2-like protein [Bacteroides vulgatus
           PC510]
 gi|319639698|ref|ZP_07994431.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A]
 gi|149932474|gb|ABR39172.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482]
 gi|254835687|gb|EET15996.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA]
 gi|294448146|gb|EFG16712.1| peptide chain release factor 2-like protein [Bacteroides vulgatus
           PC510]
 gi|317388662|gb|EFV69508.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A]
          Length = 371

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 98/372 (26%), Positives = 156/372 (41%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNR------FAEIELRM----------SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R      + +IE ++                D   K   +   +  + 
Sbjct: 1   MITIEQLKDVKERTAALERYLDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y + K    +L         D    +            +  LE +          
Sbjct: 61  KWIDGYREVKTMADELELAFDFCKDDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I  G GG+E+  +   L RMY R+A    +KV V +  D D+ G K +   
Sbjct: 121 D----CVLKINCGAGGTESQDWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMN 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V I    +  D
Sbjct: 177 IEGSFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +N+  AM+ LR+ 
Sbjct: 237 TFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMEEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|88192320|pdb|2B9M|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Ribosomal Subunit, Trnas,
           Mrna And Release Factor Rf2 From A Crystal Structure Of
           The Whole Ribosomal Complex". The Entire Crystal
           Structure Contains One 70s Ribosome, Trnas, Mrna And
           Release Factor Rf2 And Is Described In Remark 400
          Length = 365

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 15/349 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   + R  E+E R+ +    +      K+++E A +   +      +   Q   +L  
Sbjct: 18  DIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELME 77

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     ++   +L +      E   + L               +K+ IL I+ G GG+E
Sbjct: 78  ELPAEEREALKPELEEAAKKLDELYHQTL---------LNFPHAEKNAILTIQPGAGGTE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A  + ++VEV+  +   + G       + G   +  +  E+GVHR
Sbjct: 129 ACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAA-TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    +ASGR HTS A    +     E++V +  E++RID MRASG GGQ VNTTDSA
Sbjct: 189 LVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSA 248

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V   + +SQ +N+  A+K+L+ARLY++ERK+   E  A R  ++   + 
Sbjct: 249 VRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALR-GEVRPIEW 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y   +  + DHR  L  +  E VL G + D+I   L     + 
Sbjct: 308 GSQIRSYVLDKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWKAGRR 356


>gi|193215043|ref|YP_001996242.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088520|gb|ACF13795.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC
           35110]
          Length = 366

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 111/366 (30%), Positives = 172/366 (46%), Gaps = 25/366 (6%)

Query: 1   MVFLSHKQICDLKNRF----------------AEIELRMSESPSVDAYIKLTEEYAAISP 44
           M  L  + + D+  R                 AE+E + +            +    IS 
Sbjct: 1   MFELQRENLQDISERLSLLRGFLDIDARLNAIAELEKKTAAEGFWSNQESAQKVLKEISG 60

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
                  +   ++  Q     +       +  +    E      ++    + + +  +  
Sbjct: 61  HREWTEDFLDLEKTLQGEEESLEIAEELED--ESYLAEAEKNIDKLDRAVHALEFRNMLS 118

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
             DD ++ +L I AG GG+EA  +   L+RMY R+A  R +KV      + D  G K   
Sbjct: 119 GADDKRNALLTIHAGAGGTEAQDWADMLYRMYMRWAERRGFKVFTDDYQEGDGAGIKTAT 178

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIR 223
             I G   +  +K E+GVHR+ RV   +A+ R HTS A+V   PEA +  +++I  ED+ 
Sbjct: 179 LEIQGDYAYGYLKAENGVHRLVRVSPFDANARRHTSFASVYAYPEAPDDVEIEIRKEDLE 238

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           +DT R+ G GGQ+VN  ++AVRI H+P+GI+V    E+SQ QNR RAMK+LR+RLY ++R
Sbjct: 239 MDTFRSGGKGGQNVNKVETAVRIKHVPSGIVVACQQERSQFQNRERAMKMLRSRLYQLKR 298

Query: 283 KRMANERSAN--RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
           +     + A   +K +I  G    +IR+Y     RI DHR N   + +E VL G ID  I
Sbjct: 299 EEEEAAKLALEGKKKKIEWG---SQIRSYVLDDRRIKDHRTNHESFNVEAVLDGDIDQFI 355

Query: 341 NPLLTA 346
              L  
Sbjct: 356 ERYLAE 361


>gi|329296879|ref|ZP_08254215.1| peptide chain release factor 1 [Plautia stali symbiont]
          Length = 293

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 98/298 (32%), Positives = 157/298 (52%), Gaps = 12/298 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            Q  ++ Q L  +  + + +    +          K        + +  +     D   C
Sbjct: 2   QQGLEDVQGLLELAVEADDEETFNEAVVELDALDVKLGE-----LEFRRMFSGEYDSADC 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            ++I+AG+GG+EA  +   L RMY R+A  + +K E++  S+ +  G K     I G   
Sbjct: 57  YMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGTKSATIKIIGDYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASG 231
           +  ++ E+GVHR+ R    ++ GR HTS ++V + PE  +  D++I   D+RID  RASG
Sbjct: 117 YGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDSIDIEINPADLRIDVYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--E 288
           +GGQHVN T+SAVRITH+PT I+V   +++SQH+N+ +A K LRA+LY+ E ++     +
Sbjct: 177 AGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQ 236

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +   K  IG G    +IR+Y     RI D R ++     + VL G +D  I   L A
Sbjct: 237 AAEENKSDIGWG---SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 332

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 105/331 (31%), Positives = 171/331 (51%), Gaps = 6/331 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D   K  +  +  + +  K   +   +++  D  T +     +++       E
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               + +     ++    LL     DD + ++EI  G GG+EA  +   L RMY+RY   
Sbjct: 61  DQLAKLQEEF--HQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDS 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R  K EV +    D+ G K +   ISG+  +  +K E GVHR+ R+   +++ R HTS A
Sbjct: 119 RGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
           +V V+PE    I++DI  +D+RID  R+SG+GGQH+N T SAVRITHIPTGI+  + +++
Sbjct: 179 SVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QNR  AM  +RA+L+ +E ++   E++A +  Q+       +IR+Y F     + DH
Sbjct: 239 SQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQL-DIAWGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R       +  V+ G +D  I   L    ++
Sbjct: 298 RTGYETADVGGVMDGKLDPFIYAYLQWRLSQ 328


>gi|170702008|ref|ZP_02892928.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10]
 gi|171322226|ref|ZP_02911072.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5]
 gi|172061072|ref|YP_001808724.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6]
 gi|170133098|gb|EDT01506.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10]
 gi|171092451|gb|EDT37797.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5]
 gi|171993589|gb|ACB64508.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6]
 gi|325525095|gb|EGD02988.1| peptide chain release factor 2 [Burkholderia sp. TJI49]
          Length = 248

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 98/249 (39%), Positives = 149/249 (59%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ++G   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V++   
Sbjct: 61  NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RLY+
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +     VL G +D
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTRAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|295698659|ref|YP_003603314.1| peptide chain release factor 1 [Candidatus Riesia pediculicola
           USDA]
 gi|291157243|gb|ADD79688.1| peptide chain release factor 1 [Candidatus Riesia pediculicola
           USDA]
          Length = 346

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 152/345 (44%), Positives = 217/345 (62%), Gaps = 9/345 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQ 57
           M     ++   +K +F  I+       S+        L  EY  +  IIS     +  ++
Sbjct: 1   MKKSIFEEYQKIKKKFKTIQKNFLNKSSIYNSKSRPSLQREYTKLFKIISNFKKIESIRK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           E +++  +I D    S   +        +    +++EN +   L PKD +D K C LEI+
Sbjct: 61  EIEEIKKLILDEELKSLALEELN----KLINLKKKVENRLRNQLTPKDQNDRKDCFLEIK 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRM 176
           AGTGGSEAA+F  DLFRMY +YA    WKVE++S ++ + G GYKEI+A ISG+ V+ ++
Sbjct: 117 AGTGGSEAAIFAKDLFRMYCKYAESCSWKVEIISINEIESGSGYKEIIAKISGKEVYRKL 176

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           KFESG HRVQR+P TE+ GR+HTS+  VA+L +    ++ I   DIRIDT R+SG+GGQH
Sbjct: 177 KFESGGHRVQRIPETESRGRIHTSSCKVAILLKVDASEIKINQNDIRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTT+SA+R+THIPTGI V    E+SQH+NR +AM VL ARL ++E K++A E+S  +K 
Sbjct: 237 VNTTNSAIRVTHIPTGISVECQDERSQHKNRAKAMSVLLARLKNLELKKVAQEKSYKKKF 296

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
             GSG+RS+RIRTYNF +G I DHR N   Y++  V+ G ++ +I
Sbjct: 297 LFGSGERSDRIRTYNFQRGTIVDHRTNSVTYQINEVMNGKLEILI 341


>gi|253680935|ref|ZP_04861738.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
 gi|253562784|gb|EES92230.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
          Length = 327

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 116/328 (35%), Positives = 174/328 (53%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M ES   D   K  E       +  KI  Y   K   +DL  +I    S  E  + +  E
Sbjct: 1   MQESNFWDNINKAQEITQEAKGLKDKIEKYYNTKNRLEDLKVLI--EISIEEDDESSVEE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +L   KE++ + +E    +L     D  + I+ + AG GG++A  +   L RMY R+A  
Sbjct: 59  ILNEIKEVKVIIDEFKVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWAEA 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE+L     D+ G K     I G   +  +K E G+HR+ R+    A+G+  TS A
Sbjct: 119 KGYKVEILDILPGDEAGIKSASLKIMGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           ++ VLPE     D++I  +D+RIDT RASG+GGQH+N TDSAVRITHIPTGI+V + SE+
Sbjct: 179 SLEVLPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG-RIT 317
           SQ QN+  AM +L+++L +++ +    +         +IG G    +IR+Y F     + 
Sbjct: 239 SQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWG---SQIRSYVFQPYTMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR N  +  ++ V+ G ID  I   L 
Sbjct: 296 DHRTNTEMTNVDAVMDGDIDIFIVEYLK 323


>gi|76810558|ref|YP_334108.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710b]
 gi|121600418|ref|YP_993518.1| peptide chain release factor 2, programmed [Burkholderia mallei
           SAVP1]
 gi|124383704|ref|YP_001029053.1| peptide chain release factor 2 [Burkholderia mallei NCTC 10229]
 gi|126449475|ref|YP_001081026.1| peptide chain release factor 2, programmed [Burkholderia mallei
           NCTC 10247]
 gi|134278044|ref|ZP_01764759.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
 gi|167720343|ref|ZP_02403579.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei DM98]
 gi|167739335|ref|ZP_02412109.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 14]
 gi|167816549|ref|ZP_02448229.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 91]
 gi|167824945|ref|ZP_02456416.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 9]
 gi|167846462|ref|ZP_02471970.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei B7210]
 gi|167895040|ref|ZP_02482442.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 7894]
 gi|167903426|ref|ZP_02490631.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei NCTC 13177]
 gi|167911676|ref|ZP_02498767.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 112]
 gi|167919676|ref|ZP_02506767.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei BCC215]
 gi|254177740|ref|ZP_04884395.1| peptide chain release factor 2, programmed [Burkholderia mallei
           ATCC 10399]
 gi|254195760|ref|ZP_04902186.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
 gi|254357976|ref|ZP_04974249.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
 gi|76580011|gb|ABA49486.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710b]
 gi|121229228|gb|ABM51746.1| peptide chain release factor 2, programmed [Burkholderia mallei
           SAVP1]
 gi|134251694|gb|EBA51773.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
 gi|148027103|gb|EDK85124.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
 gi|160698779|gb|EDP88749.1| peptide chain release factor 2, programmed [Burkholderia mallei
           ATCC 10399]
 gi|169652505|gb|EDS85198.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
          Length = 248

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 99/249 (39%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V+I   
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RL++
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +   + VL G +D
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTKAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf]
 gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
 gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf]
 gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
          Length = 325

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 174/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   ++K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEETDRFKIE------TLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + V+++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITHIPTGI+V   
Sbjct: 175 SFASIEVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINIFITQYLK 322


>gi|196231602|ref|ZP_03130460.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
 gi|196224455|gb|EDY18967.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
          Length = 350

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 94/337 (27%), Positives = 165/337 (48%), Gaps = 16/337 (4%)

Query: 23  MSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+E        +  +   E + +   I  +   D++ ++   L  +  + N ++ ++++ 
Sbjct: 1   MAEPDFWANKERAQKNVEEVSTLRNKIGPLLTLDRQIEDLPVLIELAREANDETSVKEVE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +   +                +L    +D  +  L I +G GG+E+  +   L RMY+R+
Sbjct: 61  KEYGVIQNGLAE-----FELKMLLNGPNDRYNAFLTINSGAGGTESCDWADMLLRMYQRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +K EV+     ++ G K     ++G   F  +  E GVHR+ R+   +A+ R HT
Sbjct: 116 IERHGFKSEVMDIQLGEEAGIKSCTLKVAGEYAFGYLATERGVHRLVRISPFDANKRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTS 257
           S A V V+PE      ++I   DI +DT R+ G GGQ+VN  ++AVRI HIPTGI+    
Sbjct: 176 SFAGVDVVPELPESAPIEINEADIEVDTYRSGGKGGQNVNKVETAVRIRHIPTGIVAACQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR 315
           +E+SQ +N++ AM++L+A+L  +E  +MA E +A    K  +  G    +IR+Y F   +
Sbjct: 236 NERSQQKNKVTAMRMLQAKLQQIEVDKMAAETAAAYGEKADVSFG---SQIRSYVFQPYQ 292

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            + D R  +    +  V+ G ID  I   L   +A+ 
Sbjct: 293 KVLDLRTGVDTSNISAVMDGDIDAFIQGKLRGPEARK 329


>gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
 gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
          Length = 325

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 174/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   ++K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEETDRFKIE------TLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + V+++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITH+PTGI+V   
Sbjct: 175 SFASIEVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   ER  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINMFITQYLK 322


>gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 329

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 100/334 (29%), Positives = 170/334 (50%), Gaps = 10/334 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQ 80
           M ES   D   +     A    I  +I +Y+  +   +D+  +I      +DS +     
Sbjct: 1   MQESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMAIEENDSSLVTEVY 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
            E+  +   +  L       L+     D  + I+ + +G GG++A  +   L RMY R+ 
Sbjct: 61  NEISTLSDSVENL----RLELMLSGEYDTNNAIVTLHSGVGGTDAMDWTEMLLRMYTRWC 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + + VE L     D+ G K     ++G   +  +K E G+HR+ R+    A+G+  TS
Sbjct: 117 EKKAFNVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEKGIHRLVRISPFNANGKRQTS 176

Query: 201 AATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            A++ V PE   + +V+I   D+++DT RASG+GGQHVN T+SA+RITHIPTGI+V   +
Sbjct: 177 FASLEVTPELRQDQNVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQN 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           E+SQ QNR  A+ +L+++L +++ +R   E+  +    +       +IR+Y F     + 
Sbjct: 237 ERSQIQNRETALNMLKSKLVELK-ERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYTMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           DHR N+ +  +  V+ G +D  I   L + + K 
Sbjct: 296 DHRTNIQVNDVYKVMDGELDVFIKGYLHSDENKR 329


>gi|301335943|ref|ZP_07224187.1| peptide chain release factor 2 [Chlamydia trachomatis L2tet1]
          Length = 334

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 110/334 (32%), Positives = 173/334 (51%), Gaps = 11/334 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +  +    D   +  +    I+ +  ++S +++ K +   +   + D  S  ++    
Sbjct: 2   EQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDEESSKDLEMQK 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V  + RMY R+
Sbjct: 62  ELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A+   W+VEV+   D +  G K I   + G   +   K ESGVHR+ R+   +++ + HT
Sbjct: 120 ASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHT 179

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH PTGI+V   
Sbjct: 180 SFASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +IR Y F    
Sbjct: 240 NERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQIRNYVFQPYT 296

Query: 315 RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
            + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 297 LVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 330


>gi|254247791|ref|ZP_04941112.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184]
 gi|124872567|gb|EAY64283.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184]
          Length = 248

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 100/249 (40%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y RY   + +K EVL  SD D  G K
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ++G   +  ++ E+G+HR+ R    ++SG  HTS ++V V PE  +  +V+I   
Sbjct: 61  NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQH+N TDSAVRITH+PTGI+V   +++SQH+NR  AM +L++RLY+
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           VE ++   E+    + K  +G G    +IR+Y   Q R+ D R N+ +     VL G +D
Sbjct: 181 VEMRKRQAEQDKLESSKTDVGWG---HQIRSYVLDQSRVKDLRTNVEMSNTRAVLDGDLD 237

Query: 338 DIINPLLTA 346
           D I+  L  
Sbjct: 238 DFISASLKQ 246


>gi|217031931|ref|ZP_03437433.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128]
 gi|298736886|ref|YP_003729416.1| peptide chain release factor RF-2 [Helicobacter pylori B8]
 gi|216946400|gb|EEC25005.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128]
 gi|298356080|emb|CBI66952.1| peptide chain release factor RF-2 [Helicobacter pylori B8]
          Length = 363

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELGRIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDND-----EVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K ESGVHR+ 
Sbjct: 142 DWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N     +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIA 361


>gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
          Length = 342

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 10/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
             +  +    +   +  +       +   I+   Q +Q+  D   +I     + ++  + 
Sbjct: 2   NNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDLSVVK 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + E      +            +     D     LE+ +G GG+E+  +   L RMY R+
Sbjct: 62  EAEDTLKALKAEA--ARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  +++KVE+L   D ++ G K     + G   +  +K ESGVHR+ R+   +++ R HT
Sbjct: 120 AERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHT 179

Query: 200 SAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S +++ V P     I ++I   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V   
Sbjct: 180 SFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR 315
            E+SQH+NR +A  +LRAR+Y+ E K+  +  +A    K  IG G    +IR+Y     +
Sbjct: 240 QERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWG---HQIRSYVLQPYQ 296

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + D R  +     + VL G +++ +   L   
Sbjct: 297 LVKDLRTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|7388055|sp|P74476|RF2_SYNY3 RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 372

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 96/343 (27%), Positives = 164/343 (47%), Gaps = 7/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK +  ++E   ++    D   +  +    ++   S++  +   +Q+ QD   ++ 
Sbjct: 27  DLPGLKAKVQDLEQCAAQPDFWDDTDQAQQILQTLNETKSQLEQWGIWQQQWQDSQAIVE 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +   L + E    + +     +      L     D K   L I AG GG++A  
Sbjct: 87  LLELEDDQALLTEAETTLEQLQKEL--DRWELQQLLSGPYDAKGATLTINAGAGGTDAQD 144

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R++  + +KV +   S+ D+ G K +   I GR  +  +K E G HR+ R
Sbjct: 145 WAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLVR 204

Query: 188 VPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +    A+G+  TS A V V+P      I +DIP +D+ I T RA G GGQ+VN  ++AVR
Sbjct: 205 ISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVR 264

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTG+ V  + E+SQ QN+ +A+ +L+A+L  V  ++ A   +  R   +       
Sbjct: 265 IVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVE-AAWGT 323

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR Y F   + + D R N+    +  V+ G + D I   L  
Sbjct: 324 QIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLRH 366


>gi|157964348|ref|YP_001499172.1| peptide chain release factor 2 [Rickettsia massiliae MTU5]
 gi|157844124|gb|ABV84625.1| Peptide chain release factor RF-2 [Rickettsia massiliae MTU5]
          Length = 337

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 99/334 (29%), Positives = 174/334 (52%), Gaps = 10/334 (2%)

Query: 19  IELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           +E   +     +      +     S +  K++ +++ K   +D   +     +++++  L
Sbjct: 4   LEELTANPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAENDLETL 63

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
           +Q  +    K +  +  +     L     D  +C LEI AG GG+E+  +   + RMY R
Sbjct: 64  SQ--IEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLR 121

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +K E+++  + ++ G K     I G+  +   K E+GVHR+ R+    A+G+  
Sbjct: 122 FAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRM 181

Query: 199 TSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAVRITHIPTG +   
Sbjct: 182 TSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQC 241

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG 314
            S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G    +IR+Y     
Sbjct: 242 QSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWG---HQIRSYVLQPY 298

Query: 315 R-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + + D R +      + VL G +++ ++  L  +
Sbjct: 299 QMVKDLRTDYETSDTKGVLDGDLEEFVSANLAMN 332


>gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
 gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           19397]
 gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
          Length = 325

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 95/329 (28%), Positives = 174/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   ++K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEETDRFKIE------TLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + V+++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITH+PTGI+V   
Sbjct: 175 SFASIEVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINIFITQYLK 322


>gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065]
          Length = 325

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 174/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   ++K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEETDRFKIE------TLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + V+++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITH+PTGI+V   
Sbjct: 175 SFASIEVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   ER  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINMFITQYLK 322


>gi|296122601|ref|YP_003630379.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
 gi|296014941|gb|ADG68180.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
          Length = 372

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 170/346 (49%), Gaps = 12/346 (3%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           + R AEI   MS     D   K       +  +   +    +     ++L  +      D
Sbjct: 29  QARVAEINEAMSAPDFWDHQEKAQALVTELRNVNGSLKPLQELIDGTEELAVLREFLAED 88

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
                 ++ E++ +   ++E   ++    +    +D  S  L+I+AG GG++A+ +   L
Sbjct: 89  DSSE--SRDEMVGLLASLQEKFQQVELKAMMSRPEDPCSAYLQIQAGEGGTDASDWAAML 146

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  R ++ E++  S+ ++ G +     I G  V+  ++ E+GVHR+ R+   +
Sbjct: 147 LRMYTRWAEDRGFETELIEISEAEEAGIRNATLAIRGEYVYGLLRGETGVHRLIRISPFD 206

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDI----PLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
            +GR  TS A V V+PE  +           + IR D  RASG+GGQHVN T SA+R+TH
Sbjct: 207 GAGRRQTSFAAVDVIPEPDDTIDIDINWEDPKIIREDIFRASGAGGQHVNKTSSAIRLTH 266

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
           +PT  +V   +E+SQH+NR    K+L A+L  +E  +  NE +  R  K +IG G   E 
Sbjct: 267 LPTNTVVQCQNERSQHKNRSWCRKMLVAKLLQLETVKRENEAAHKRGQKSKIGFG--GET 324

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           IR Y  +  + + D R NL +     VL G ID+ +   L    A+
Sbjct: 325 IRNYVLNPEQFVKDTRTNLKVGTPMPVLDGRIDEFLEAYLRWDMAE 370


>gi|293390164|ref|ZP_06634498.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950698|gb|EFE00817.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 300

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 97/305 (31%), Positives = 161/305 (52%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           ++ I   +Q  ++   L  +  +   +    +      +A    + +   ++ +  +   
Sbjct: 2   VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEA-----IAELNALEQQLEKLEFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K    
Sbjct: 57  EHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
            +SG   F  ++ E+G+HR+ R    +++ R HTS +   V PE  +         D+RI
Sbjct: 117 KVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRI 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVN T+SAVRITHIP+GI+V   +++SQH+N+ +AMK L+A+LY++E +
Sbjct: 177 DVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQ 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 237 KKNADKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIE 293

Query: 342 PLLTA 346
             L A
Sbjct: 294 ASLKA 298


>gi|189499218|ref|YP_001958688.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1]
 gi|189494659|gb|ACE03207.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1]
          Length = 363

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 170/343 (49%), Gaps = 9/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +  ++  E+E   +E    +   +  +    I+        +   +++  DL   + 
Sbjct: 23  DVDERLHKIGELEQITTEENFWENQQEANKIVKEINDHKLWTEGFLALEKQTADLREELE 82

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 E  +    E+ +    I +   EI +  +    DD  + +L I AG GG+EA  
Sbjct: 83  IAEELGE--ESLAEEIDSRIGSIEQKIAEIEFKNMLSGKDDPGNALLTINAGAGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+A  + +K+      + D  G K     I G   +  +K E+GVHR+ R
Sbjct: 141 WAEMLYRMYLRWAERKGFKIFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V   +++ R HTS A+V   PEA    +++I  ED+ + T R+ G GGQ+VN  ++AVRI
Sbjct: 201 VSPFDSNARRHTSFASVYSYPEAPPDAEIEIRKEDLELSTFRSGGKGGQNVNKVETAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
            HIP+GI+V    E+SQ QNR RA K+LRA+LY  +R+     + A    K +I  G   
Sbjct: 261 KHIPSGIVVSCQQERSQFQNRERATKMLRAQLYKKQREEEEARKQAVEGTKKKIEWG--- 317

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +IR+Y     RI DHR N   + +E VL G IDD I   L+ 
Sbjct: 318 SQIRSYVMDDRRIKDHRTNYERHDIENVLDGDIDDFIEKYLSE 360


>gi|240850608|ref|YP_002972008.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
 gi|240267731|gb|ACS51319.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
          Length = 375

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 16/342 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R   +  +  +    D   +      E   +   I+ +  + +  +E  +L  +  + +
Sbjct: 30  KRLEYLNQKAEDPSLWDDAQQAQDMMRERQRLDDSINGLLSFTKTLEECIELIAMGEEES 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
               I D          +  +         +L     D     LE+ AG GG+E+  +  
Sbjct: 90  DVEIIADAENSIRNLKNEIDK-----RQIDVLLSGEADPNDTYLEVHAGAGGTESQDWAS 144

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A   + KVE+L   D ++ G K     + G   +  +K ESGVHR+ R+  
Sbjct: 145 MLLRMYMRWAEQHEMKVEILEIHDGEEAGIKSATILVKGHNAYGMLKTESGVHRLVRISP 204

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ + HTS A++ V P     I+VD+   D+RIDT RASG+GGQHVNTTDSAVRITHI
Sbjct: 205 FDSNAKRHTSFASIWVYPVIDDNIEVDVSEADVRIDTYRASGAGGQHVNTTDSAVRITHI 264

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRSERI 306
            TGI+V   +E+SQH+NR  A  +LRARLY+ E K+   E   + + K +IG G    +I
Sbjct: 265 KTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAAESSKTEIGWG---HQI 321

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R+Y     + + D R  +     + VL G +D  I   L   
Sbjct: 322 RSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDAFIEAALARR 363


>gi|296436914|gb|ADH19084.1| peptide chain release factor 2 [Chlamydia trachomatis G/11222]
          Length = 334

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 110/334 (32%), Positives = 173/334 (51%), Gaps = 11/334 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +  +    D  ++  +    I+ +  ++S +++ K +   +   + D  S  ++    
Sbjct: 2   EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V  L RMY R+
Sbjct: 62  ELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A+   W++EV+   D +  G K I   + G   +   K ESGVHR+ R+   +++ + HT
Sbjct: 120 ASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHT 179

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V PE     +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH PTGI+V   
Sbjct: 180 SFASVEVFPEIDNKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +IR Y F    
Sbjct: 240 NERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQIRNYVFQPYT 296

Query: 315 RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
            + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 297 LVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 330


>gi|327267784|ref|XP_003218679.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Anolis carolinensis]
          Length = 443

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 135/363 (37%), Positives = 213/363 (58%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + D+      I   ++++   +     L++ +A + P+        + K+E QDL  
Sbjct: 71  QKYLQDVSQEHQSIGQLLNDNSISEYKRRDLSKRHAELFPLAVSFKEIQEAKKEMQDLEA 130

Query: 65  VIGDHNSDSEI--RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    NS  E    +LA  E   I+++IREL  ++  +L+P+D  D+   +LE+ +G  T
Sbjct: 131 LCAKLNSSEEKALLELAIEEKGVIDQKIRELYQKLFQILIPRDKYDECDVLLEVTSGRTT 190

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ YA  + W  E+   + ++ GG     A ISG  V+  +K+E 
Sbjct: 191 GGDICQQFTKEVFDMYQNYADYKCWTFEIRKYTPSEYGGLHHAAAYISGDDVYRHLKYEG 250

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P T  S R+   HT   +V VLP+  EI++ +  +D+RIDT RA G+GGQHV
Sbjct: 251 GIHRVQRIPETGLSSRMQRIHTGTMSVIVLPQLEEINIKVDPKDLRIDTFRAKGAGGQHV 310

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRI HIPTGI V    E+SQ  NR +AM+ L+ +LY    +R  +++ + RK+Q
Sbjct: 311 NTTDSAVRIVHIPTGITVECQQERSQQVNREKAMQALKDKLYQQAIERELSQKQSARKMQ 370

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R++DHRI+  +  ++ +L G   +D++IN LL A + + +  
Sbjct: 371 LGTRSQSERIRTYNFNQDRVSDHRISYEVRDIKGILSGKGVLDELINKLLEASEMESLNE 430

Query: 355 ASE 357
             E
Sbjct: 431 YLE 433


>gi|78187873|ref|YP_375916.1| peptide chain release factor 2 [Chlorobium luteolum DSM 273]
 gi|78167775|gb|ABB24873.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           luteolum DSM 273]
          Length = 363

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 167/343 (48%), Gaps = 9/343 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   K +  ++E         +           ++   S +  Y++   + +     + 
Sbjct: 23  DVDQRKEKIEDLEKVSGNPEFWNDQKAAHAVLKELNENRSWVEGYEKLAGKAESCRDELA 82

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             +   +  +  + E+ A    I +    I +  +    DD  + I+ I AG GG+EA  
Sbjct: 83  IADELED--ESFERELTASIDAIEQEIAAIEFKNMLSGKDDPGNAIITIHAGAGGTEAQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+A  + +KV      + D  G K     I G   +  +K E+GVHR+ R
Sbjct: 141 WAEMLYRMYMRWAERKGFKVYTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V   +++ R HTS A+V   PEA    ++++  ED+ + T R+ G GGQ+VN  ++AVRI
Sbjct: 201 VSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVETAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRS 303
            HIP+GI+V    E+SQ QNR RAMK+L A+LY  +R+     +     +K +I  G   
Sbjct: 261 KHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREVEGKKKKIEWG--- 317

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +IR+Y     RI DHR N   + +E VL G IDD +   L+ 
Sbjct: 318 SQIRSYVLDDRRIKDHRTNYERFDVETVLDGDIDDFMEKYLSE 360


>gi|227889611|ref|ZP_04007416.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC
           33200]
 gi|268319827|ref|YP_003293483.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785]
 gi|227849754|gb|EEJ59840.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC
           33200]
 gi|262398202|emb|CAX67216.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785]
          Length = 332

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 104/327 (31%), Positives = 167/327 (51%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D   +        + +  K   + Q + +  D  T +    +D +     ++ 
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              +        ++    LL  D  D  + ++EI  G GG+EA  +   L RMY+RYAA 
Sbjct: 61  EEMVSLSQSF--HDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAAS 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
              K E+      ++ G K +   I G+  F  +K E+GVHR+ R+   +++ R HTS A
Sbjct: 119 HDLKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE  +  +VDI  +D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QNR  AM +LRA+L+ +E ++   +    +  Q   G    +IR+Y F     + DH
Sbjct: 239 SQLQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIG-FGSQIRSYVFHPYNMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R N     +  V+ G +D+ I   L  
Sbjct: 298 RTNFETSDVNGVMDGKLDNFIYAYLQW 324


>gi|120610527|ref|YP_970205.1| peptide chain release factor 2 [Acidovorax citrulli AAC00-1]
 gi|120588991|gb|ABM32431.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax
           citrulli AAC00-1]
          Length = 300

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 101/305 (33%), Positives = 161/305 (52%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  +    ++  +  +L+ +  +        +   + + A   ++R L  E+ +  +  +
Sbjct: 2   VVTLDKLTRELADNAELYEMSKEEGD-----EAGLLTIEAEAGKLRPLIEELEFRRMFSN 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++I+AG GG+EA  + G L R Y +YA  + +K  V   +  D  G K    
Sbjct: 57  EADPLNCFVDIQAGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            I G   +  ++ E+GVHR+ R    ++SG  HTS A++ V PE  +  +++I   D+R 
Sbjct: 117 KIEGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRT 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVR+THIPTGI+V     +SQH NR  A + LR+RLYD E +
Sbjct: 177 DTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+    + K  +G G    +IR+Y     RI D R N+ +   + VL G +D  I 
Sbjct: 237 KRMEEQQKLEDTKTDVGWG---HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIE 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|109502759|ref|XP_001073018.1| PREDICTED: CG5705-like [Rattus norvegicus]
 gi|149050030|gb|EDM02354.1| rCG37077, isoform CRA_b [Rattus norvegicus]
          Length = 446

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 114/360 (31%), Positives = 190/360 (52%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLT-EEYAAISPIISKISIYDQKKQEEQDLHT 64
            K +  L + +  ++  + +    +   + +   +A ++P+++      + +Q  ++L +
Sbjct: 77  QKYMEGLNDEYQSLDQCLQDISEDEGDRRASHRRHAELAPLVAVYQEIQEAEQAIEELES 136

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG----T 120
           +    N   E +    +       + +        L      +      + +       T
Sbjct: 137 MCKSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTT 196

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 197 GGDICQQFTREIFDMYQNYSYYKHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 256

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +   D+R+DT RA G+GGQHV
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPRDLRVDTFRARGAGGQHV 316

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A++VLRARLY    ++   ++   RKLQ
Sbjct: 317 NTTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDKCQQQNARKLQ 376

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI   +  ++  L+G   +D +I  LL +   + I  
Sbjct: 377 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLLQSADEEAIAE 436


>gi|227821685|ref|YP_002825655.1| peptide chain release factor 2 [Sinorhizobium fredii NGR234]
 gi|227340684|gb|ACP24902.1| peptide chain release factor 2 protein [Sinorhizobium fredii
           NGR234]
          Length = 342

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 100/336 (29%), Positives = 166/336 (49%), Gaps = 16/336 (4%)

Query: 20  ELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
             +  +    +      KL  E   +   I+ +  ++Q+  +  +L  +  +    + + 
Sbjct: 2   NNKAEDPTLWNDAGEAQKLMRERQQLDDSITGLRRFEQQLSDNIELIELGEEEGDSAIVT 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           +  +       +  +          +     D     LE+ +G GG+E+  +   L RMY
Sbjct: 62  EAEEALRQLRNEASK-----KQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  + +KVE++   D ++ G K     + G   +  +K ESGVHR+ R+   +++ R
Sbjct: 117 SRWAERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNAR 176

Query: 197 VHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS +++ V P     I +DI   D RIDT R+SG+GGQHVNTTDSAVRITH+P+GI+V
Sbjct: 177 RHTSFSSIWVYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVV 236

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFS 312
               E+SQH+NR +A  +LRARLY+ E K+  +  +A    K  IG G    +IR+Y   
Sbjct: 237 QCQQERSQHKNRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWG---HQIRSYVLQ 293

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + + D R  +       VL G +++ +   L   
Sbjct: 294 PYQLVKDLRTGVESTSPGDVLDGELNEFMEAALAHR 329


>gi|255311271|ref|ZP_05353841.1| peptide chain release factor 2 [Chlamydia trachomatis 6276]
 gi|255317573|ref|ZP_05358819.1| peptide chain release factor 2 [Chlamydia trachomatis 6276s]
 gi|297748590|gb|ADI51136.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
           trachomatis D-EC]
 gi|297749470|gb|ADI52148.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
           trachomatis D-LC]
          Length = 334

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 110/334 (32%), Positives = 174/334 (52%), Gaps = 11/334 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +  +    D  ++  +    I+ +  ++S +++ K +   +   + D  S  ++    
Sbjct: 2   EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V  L RMY R+
Sbjct: 62  ELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A+   W++EV+   D +  G K I   + G   +   K ESGVHR+ R+   +++ + HT
Sbjct: 120 ASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHT 179

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH PTGI+V   
Sbjct: 180 SFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +IR Y F    
Sbjct: 240 NERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQIRNYVFQPYT 296

Query: 315 RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
            + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 297 LVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 330


>gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Mesorhizobium sp. BNC1]
 gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp.
           BNC1]
          Length = 322

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 160/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E  ++   I+ I+   +   +  +L  +  +      + +          +       
Sbjct: 1   MRERQSLEENINAINGLSRSLDDNVELIKLGEEEGDAGIVEEAESAIRSLRGEISA---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  R  KVE L   D 
Sbjct: 57  -RQIETLLSGEADANDTYLEVHAGAGGTESQDWALMLLRMYTRWAERRGMKVETLEVHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS A++ V P     I+
Sbjct: 116 EEAGIKSATILVHGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASIWVYPVIDDSIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           ++IP  ++RIDT R+SG+GGQHVNTTDSAVRITHIPTGI +    E+SQH+NR +A ++L
Sbjct: 176 IEIPESEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWEML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+     +A    K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYELELKKREEAANATEASKSDIGWG---HQIRSYVLQPYQLVKDLRTGVESPSPQD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L+  
Sbjct: 293 VLDGDLDEFMKASLSQR 309


>gi|261867765|ref|YP_003255687.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413097|gb|ACX82468.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 300

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           ++ I   +Q  ++   L  +  +   +    +            + +   ++ +  +   
Sbjct: 2   VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAITE-----LNALEQQLEKLEFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K    
Sbjct: 57  EHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
            +SG   F  ++ E+G+HR+ R    +++ R HTS +   V PE  +         D+RI
Sbjct: 117 KVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRI 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVN T+SAVRITHIP+GI+V   +++SQH+N+ +AMK L+A+LY++E +
Sbjct: 177 DVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQ 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 237 KKNADKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDRFIE 293

Query: 342 PLLTA 346
             L A
Sbjct: 294 ASLKA 298


>gi|15594420|ref|NP_212208.1| peptide chain release factor 2 [Borrelia burgdorferi B31]
 gi|2687953|gb|AAC66459.1| peptide chain release factor 2 (prfB) [Borrelia burgdorferi B31]
          Length = 348

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  +   A S + +KI  +++   + +DL  +    
Sbjct: 12  NEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIKDLSDLCEIA 71

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +   L        ++    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 72  ENEKDTNGLEIEFNTLEKQYKDLLTI-----SYFKEELDANNAFLTIHSGAGGTEACDWV 126

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 127 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 185

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 186 PFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 245

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +
Sbjct: 246 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---Q 302

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 303 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 344


>gi|325953656|ref|YP_004237316.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
 gi|323436274|gb|ADX66738.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
          Length = 366

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 96/362 (26%), Positives = 159/362 (43%), Gaps = 24/362 (6%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
             +  Q  D++ R   +                E + +     D   K       +  I 
Sbjct: 1   MFNFDQYKDIQKRIQALYTYLEIEQKRIQVTNDEEKTASPDFWDDPKKAEMFMKELRSIK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y+  +Q   DL  +I  +       +  Q       K +  +E    +  +  D 
Sbjct: 61  KWIEDYESVEQAANDLEVLIEFNKEGEVSDEEVQEHYSKTIKLLENIE----FKNMLSDE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D+   IL+I AG GG+E+  +   L RMY  +A    +KV  L+    D  G K +   
Sbjct: 117 GDNLGAILQITAGAGGTESCDWASMLMRMYLMWAESHGYKVRELNFQAGDVAGVKTVTLE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRID 225
           I G   F  +K E+GVHR+ R+   +++ + HTS  +  V P   E  ++DI   DI + 
Sbjct: 177 IDGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFVSAYVSPMVDETIEIDINPADIEMQ 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+ G+GGQ+VN  ++ V++TH PTGI+V    E+SQ  NR RAM++L++ LY +E  +
Sbjct: 237 TSRSGGAGGQNVNKVETKVQLTHKPTGIVVICQIERSQLANRERAMEMLKSELYKIELDK 296

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPL 343
               R+     ++   +   +IR Y     + + D R       ++ V+ G ID  +   
Sbjct: 297 KMAARNEIESNKMK-IEWGSQIRNYVMHPYKLVKDVRTGTETGNVDAVMNGDIDQFLKSY 355

Query: 344 LT 345
           L 
Sbjct: 356 LM 357


>gi|159474546|ref|XP_001695386.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii]
 gi|158275869|gb|EDP01644.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii]
          Length = 336

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 146/307 (47%), Positives = 197/307 (64%), Gaps = 8/307 (2%)

Query: 33  IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRE 92
             +  EYA + P+    S   Q + E  DL  +  D   D+ +R +A  E  A+ +E  +
Sbjct: 8   RDVGREYARLQPLAHGYSRLLQVRAELSDLAGLARDP--DAGVRAMAADEAAALRQEAAD 65

Query: 93  LENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER-----YAALRKWKV 147
           L   +   L+P +    +  +LE+RAG GG+EAALF  +L  MY R       A R W  
Sbjct: 66  LTRRLLLALVPPEPSASRPALLEVRAGAGGAEAALFASELLAMYRRLAQARTCASRGWTW 125

Query: 148 EVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVL 207
           EVL   +++ GG +      +G GV+  +  ESGVHRVQRVP TEA GR+HTS A V VL
Sbjct: 126 EVLELGNSEHGGVRHATVAGAGEGVYGVLSGESGVHRVQRVPVTEAGGRLHTSTAAVVVL 185

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
           P+A E+DV +  ED+R++TMRASG+GGQHVN TDSAVRITH+PTG++V   +E+SQH NR
Sbjct: 186 PQADEVDVRLREEDLRVETMRASGAGGQHVNVTDSAVRITHLPTGLVVSCQNERSQHLNR 245

Query: 267 LRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
             A+KVLR+RLYD+E +R A +    R   + SGDRSER+RTYNF QGR+TDHRI+LT++
Sbjct: 246 AAALKVLRSRLYDLEAQRRARQAGEQRSALVASGDRSERVRTYNFPQGRVTDHRIHLTVH 305

Query: 327 KLEYVLQ 333
            L  VL+
Sbjct: 306 DLGSVLE 312


>gi|255348832|ref|ZP_05380839.1| peptide chain release factor 2 [Chlamydia trachomatis 70]
 gi|255503372|ref|ZP_05381762.1| peptide chain release factor 2 [Chlamydia trachomatis 70s]
 gi|255507050|ref|ZP_05382689.1| peptide chain release factor 2 [Chlamydia trachomatis D(s)2923]
 gi|296435060|gb|ADH17238.1| peptide chain release factor 2 [Chlamydia trachomatis E/150]
 gi|296438780|gb|ADH20933.1| peptide chain release factor 2 [Chlamydia trachomatis E/11023]
          Length = 334

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 109/334 (32%), Positives = 172/334 (51%), Gaps = 11/334 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +  +    D   +  +    I+ +  ++S +++ K +   +   + D  S  ++    
Sbjct: 2   EQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDEESSKDLEMQK 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           ++E   +  E +  E     L L     D  SC L I AG GG+E+  +V  L RMY R+
Sbjct: 62  ELEKEFVFCEKKITE--WETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A+   W++EV+   D +  G K I   + G   +   K ESGVHR+ R+   +++ + HT
Sbjct: 120 ASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHT 179

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH PTGI+V   
Sbjct: 180 SFVSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG- 314
           +E+SQ QNR   M +LRAR+Y    +    +++ +RK   +I  G    +IR Y F    
Sbjct: 240 NERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWG---SQIRNYVFQPYT 296

Query: 315 RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
            + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 297 LVKDVRTGYEVGNIQAMMDGELLDAFIKAYLVDY 330


>gi|28210088|ref|NP_781032.1| peptide chain release factor 2 [Clostridium tetani E88]
 gi|28202524|gb|AAO34969.1| bacterial peptide chain release factor 2 [Clostridium tetani E88]
          Length = 325

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 163/328 (49%), Gaps = 6/328 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    +   +  E       I  ++  +D  +   +D   +I     + +I    ++ 
Sbjct: 1   MQEPDFWEDIKRAQEVTQQEKLIKDRLEKFDSLENRIEDSLVLIELMKEEEDISSAGEVL 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              +  +       I  L       D  + I+ + AG GG++A  +   L RMY R+A  
Sbjct: 61  KELVLLKKEIESFRIEVL--LSGEYDRNNAIMTLHAGVGGTDAQDWTEMLLRMYTRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KV+ L     D+ G K +   I+G   +  +K E GVHR+ R+    A+G+  TS A
Sbjct: 119 KGYKVDTLDFLPGDEAGIKSVTLKITGDFAYGYLKAEKGVHRIVRISPYNANGKRQTSFA 178

Query: 203 TVA-VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           ++  +     + D++I  +D+++DT RASG+GGQHVN T+SAVRITHIPTGI+V   SE+
Sbjct: 179 SLELIPELTEDQDIEIIDDDLKVDTYRASGAGGQHVNKTESAVRITHIPTGIVVQCQSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH NR  A+K+L+A+L +++      +       ++       +IR+Y F     + DH
Sbjct: 239 SQHSNRDTALKMLKAKLVELKEAEHKEKIEDLT-GELKDMGWGSQIRSYVFHPYNLVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R +     L  V+ G ID  IN  L A+
Sbjct: 298 RTSAETGNLTAVMDGDIDLFINEYLKAN 325


>gi|255528153|ref|ZP_05394980.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
 gi|255508166|gb|EET84579.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
          Length = 326

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 102/332 (30%), Positives = 170/332 (51%), Gaps = 12/332 (3%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    +      ++T E   +   + K    + K Q+ + L  +  + N  S  +D+ 
Sbjct: 1   MQEPNFWNDTDKAQEITSEERFLKSRLDKYKELETKIQDAEFLTKLAIEENDLSSSKDII 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +       +            +L     D  + I++I  G GG++A  +   L RMY R+
Sbjct: 61  REVEEIDNET-----ERFRIEILLSGEYDKNNAIMDIHVGVGGTDAQDWTEMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +K+E +     +D G K     I G   +  +K E G+HR+ R+    A+G+  T
Sbjct: 116 AEKKGFKIETVDILPAEDAGIKSATLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE     D+DI  +DI++DT R+SG+GGQHVN T+SA+RITHIPTGI+V   
Sbjct: 176 SFASIEVLPELTNNQDIDIKPDDIKVDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +++SQH NR  AM++L+A+L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 236 NQRSQHHNREEAMRMLKAKLAELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFQPYTMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            DHR ++    +  V+ G ID  IN  L  + 
Sbjct: 295 KDHRTSVECGNINAVMDGDIDQFINEYLKQYN 326


>gi|193786181|dbj|BAG51464.1| unnamed protein product [Homo sapiens]
          Length = 445

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 132/363 (36%), Positives = 211/363 (58%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I+++I  L NE+   L+PK+  D    ILE+ AG  T
Sbjct: 136 MCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D+GG     A ISG GV+  +K+E 
Sbjct: 196 GGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADNGGLHHAAARISGDGVYKHLKYEG 255

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 256 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHV 315

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 316 NKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQ 375

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R++DHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 376 VGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAE 435

Query: 355 ASE 357
             +
Sbjct: 436 LLD 438


>gi|332531395|ref|ZP_08407299.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
 gi|332039064|gb|EGI75486.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
          Length = 248

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 98/249 (39%), Positives = 136/249 (54%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D     L+I+AG GG+EA  +   L R Y +YA  + +K  V   +  D  G K
Sbjct: 1   MFNNPADPLPAFLDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEDETPGDTAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E+GVHR+ R    ++SG  HTS A++ V PE  +  +++I   
Sbjct: 61  SATIKIEGDYAFGLLRTETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDTIEIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R DT RASG+GGQH+N TDSAVR+THIPTGI+V     +SQH NR  A K LR+RLYD
Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYD 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y   Q RI D R N      + VL G +D
Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWG---HQIRSYVLDQSRIKDLRTNYETSATQKVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L  
Sbjct: 238 PFIEASLKQ 246


>gi|28493165|ref|NP_787326.1| peptide chain release factor 2 [Tropheryma whipplei str. Twist]
 gi|28572722|ref|NP_789502.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27]
 gi|28410855|emb|CAD67240.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27]
 gi|28476205|gb|AAO44295.1| peptide chain release factor RF-2 [Tropheryma whipplei str. Twist]
          Length = 376

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 108/350 (30%), Positives = 169/350 (48%), Gaps = 11/350 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           L  R AE+  R+S+        +  +    +S   +++      + +  ++  ++    +
Sbjct: 29  LSKRIAELTARVSDPDLWTTPDRAQQIARELSITKAQLDRLTNLEAQLDEMRVLVTLLEN 88

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + +   L +    A         N +    +  +  D    +L IRAG GG +AA F   
Sbjct: 89  EHDAGLLDEGSRKAKLLLEEA--NHLLIQNMLNNEYDCYPAVLTIRAGAGGIDAADFAQM 146

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A     +  V+  S  ++ G +     I     F ++  ESG HR+ R+   
Sbjct: 147 LLRMYIRWAQKHSSEAIVMDISYAEEAGIRSATLRIDLPFAFGKLHQESGTHRLVRISPF 206

Query: 192 EASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+G+ HTS A V V+P       ++I  ++IRID  R+SG GGQ VNTTDSAVRITH+P
Sbjct: 207 NAAGKRHTSFAAVEVIPLLEEVSSIEITNDEIRIDVFRSSGPGGQSVNTTDSAVRITHLP 266

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GDRSERIR 307
           TGI+V   +EKSQ QNR  AM++LRARL   +R+    E +A RK   G+      E++R
Sbjct: 267 TGIVVSCQNEKSQIQNRESAMRILRARLLLNKRQ----EEAAIRKELAGNIVASWGEQVR 322

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            Y  +  + + D R        + V  G ID  I+  +  H  K I + +
Sbjct: 323 NYVLAPYQLVKDLRSLHESSMPDKVFDGDIDGFIDAGIKWHAQKHILNQN 372


>gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 376

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 169/347 (48%), Gaps = 15/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  LK+  AE+    +     D         + +S     +    +  Q  +D+  +  
Sbjct: 24  DVEQLKSEVAELTEAAAAPDLWDDPDVAQAITSKLSHKQGTLEKLQKFDQRIEDVELLVS 83

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G+   D +  + A  EV  ++ E+  LE       L     D++S ++ +RAG GG +A
Sbjct: 84  MGEDEGDEDALNEAAAEVEKLKSELAALEI----STLLSGEFDERSAVITVRAGAGGDDA 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +KVE L +S  +  G K     ++    +  +  E+G HR+
Sbjct: 140 TDWAQMLTRMYIRWAENRGYKVEELDTSYAEGAGVKSATVQVNAPYAYGTLSVEAGTHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P       +DI   D+RID  R+SG GGQ VNTTDSAV
Sbjct: 200 VRISPFDNQGRRQTSFAAVEVVPLIEQTDHIDIDENDLRIDVFRSSGPGGQSVNTTDSAV 259

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS--GD 301
           RITH+PTG++V+  +EKSQ QNR  AM+VL++RL  ++R+    +    +K   G     
Sbjct: 260 RITHVPTGVVVSMQNEKSQIQNRAAAMRVLQSRLLQLKREEEEAQ----KKDLAGDIKAS 315

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +++R+Y     + + D R    +   + V  G IDD +   +   
Sbjct: 316 WGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDIDDFLEAGIRWR 362


>gi|299469865|emb|CBN76719.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 364

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 148/360 (41%), Positives = 224/360 (62%), Gaps = 10/360 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             +++  +K R  EI   M++    V     + +E   +  ++   +  ++K  E QDL 
Sbjct: 1   MRQRLEHMKGRHEEIVESMTKGEVPVREMGSVGKELGRLEAVLDLQAKVEEKAAEIQDLE 60

Query: 64  TVIGD-----HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            V+         +D E+  +A+ E       + +L  ++  LLLP+D  D K+ +LE+R+
Sbjct: 61  EVMQATNAGGAEADREMHGIAKEEHADCTAALEKLRLDLTSLLLPRDEGDSKNALLEVRS 120

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G+GG EAA F  +LF MY R+A L+ WK E ++ S  D GGY+E  A+I G  V+  +KF
Sbjct: 121 GSGGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASASIRGEDVYGSLKF 180

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E+GVHRVQRVP+   S R+HTSAA+V V+ EA E+D+ +   D+R +  RASG+GGQHVN
Sbjct: 181 ENGVHRVQRVPS--NSPRLHTSAASVVVMMEAEEMDLKLEQSDLRFEAFRASGAGGQHVN 238

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TT+SAVRITH+PTGI  +   E+SQH N+ +A+KVLR+R+++V R  +A + +A R   +
Sbjct: 239 TTESAVRITHVPTGITASIQDERSQHSNKEKALKVLRSRVFEVRRDEIARKEAAVRASAV 298

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           GSGDRSERIRTYNF Q RITDHR N + +  E +++G  + D +  +    Q++ + +A 
Sbjct: 299 GSGDRSERIRTYNFPQDRITDHRANYSRHGWEAMMRGEMLGDFLEAMRDKTQSEQLKAAG 358


>gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771]
          Length = 350

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 103/336 (30%), Positives = 167/336 (49%), Gaps = 16/336 (4%)

Query: 20  ELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
             +  +    +      KL  E   +   I+ +   +Q+  +  +L  +  +    S ++
Sbjct: 2   NNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVK 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           +          +  R          +     D     LE+ +G GG+E+  +   L RMY
Sbjct: 62  EAEDTLKALKAEAAR-----RQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  +++KVE+L   D ++ G K     + G   +  +K ESGVHR+ R+   +++ R
Sbjct: 117 TRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNAR 176

Query: 197 VHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS +++ V P     I ++I   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V
Sbjct: 177 RHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVV 236

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFS 312
               E+SQH+NR +A  +LRAR+Y+ E K+  +  +A    K  IG G    +IR+Y   
Sbjct: 237 QCQQERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWG---HQIRSYVLQ 293

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + + D R  +     + VL G +++ +   L   
Sbjct: 294 PYQLVKDLRTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|15611227|ref|NP_222878.1| peptide chain release factor 2 [Helicobacter pylori J99]
 gi|7388058|sp|Q9ZMR1|RF2_HELPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|4154673|gb|AAD05740.1| PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2) [Helicobacter pylori J99]
          Length = 363

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27  EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKMKNSLDESVELFELA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + +      ++    +      +     ++   ++    +D  + I+ I+ G GG+E+ 
Sbjct: 87  QNDSD-----EVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  + +K E+L   D ++ G K +   I G   +  +K E+GVHR+ 
Sbjct: 142 DWASILYRMYLRWAERKSFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN T+SAVR
Sbjct: 202 RISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH PTGI+V   +++SQH+N+  A+K+L+++LY++E ++  +      K +IG G    
Sbjct: 262 ITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y  +   ++ D R N+    +E +L G ID I+  +L A
Sbjct: 319 QIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 361


>gi|194333053|ref|YP_002014913.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271]
 gi|194310871|gb|ACF45266.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271]
          Length = 381

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 5/341 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I +   +  E+E   +E    +   +       I+   +    + +   +       + 
Sbjct: 42  DIDERLKKIEELEQITAEPDFWNDQKEAHRIVKEINEHKTWTDDFQKIAADVASRQEEVE 101

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 +  +    E+      I +    +    +    DD  + +L I AG GG+EA  
Sbjct: 102 IAEELED--ESLGSEIAGGIDSIEKEITALESKNMLSGKDDPGNALLTINAGAGGTEAQD 159

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+A  + +KV +    + +  G K     I G   +  +K E+GVHR+ R
Sbjct: 160 WAQMLYRMYMRWAERKGYKVFMDDYQEGEGAGIKTATLEIVGPYAYGYLKAENGVHRLVR 219

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V   +++ R HTS A+V   PEA    ++DI  ED+ + T R+ G GGQ+VN  ++AVRI
Sbjct: 220 VSPFDSNARRHTSFASVYTYPEAPPDAEIDIRKEDLELSTFRSGGKGGQNVNKVETAVRI 279

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIP+GI+V    E+SQ QNR RA+K+L A+LY  +R+     + A    Q    +   +
Sbjct: 280 KHIPSGIVVSCQQERSQFQNRERAIKMLMAQLYKKQREEEEARKQAVE-GQKMKIEWGSQ 338

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y     RI DHR N   + +E VL G IDD I   L+ 
Sbjct: 339 IRSYVMDDRRIKDHRTNHERHDIEAVLDGDIDDFIEKYLSE 379


>gi|332703829|ref|ZP_08423917.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332553978|gb|EGJ51022.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 368

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 189/339 (55%), Gaps = 12/339 (3%)

Query: 14  NRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            R  +IE  +S   + D   +LT   +E   IS  + ++++  + +QE ++   +  +  
Sbjct: 32  ERLRQIEDALSRPGAWDKPDRLTPMLQEKRQISEKLERLTVLHKTRQEVEEWLDLARE-- 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
              +        +      ++E   ++    +    +D  S I+EI +G GG+EA  +  
Sbjct: 90  ---DQTQEVLAILSEQLDVLQERLKDVELREMLAGPEDQNSAIMEIHSGAGGTEAQDWAE 146

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R++  + +KV +L   + ++ G+K +   + G   +  +K ESG+HR+ R+  
Sbjct: 147 MLLRMYRRWSERQGYKVSILDFLEGEEAGFKSVTVQVEGLYAYGMLKGESGIHRLIRISP 206

Query: 191 TEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            + SGR HTS A+VAV P+   +ID+D+  ED+RID  RASG+GGQHVN T+SAVRITH+
Sbjct: 207 FDTSGRRHTSFASVAVYPDVGTDIDIDVREEDLRIDVFRASGAGGQHVNKTESAVRITHL 266

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PTG++    +EKSQ +N+  A+K+L+ARLY++E K++A  R A  + +  +     +IRT
Sbjct: 267 PTGVVAQCQNEKSQLRNKETALKILKARLYELELKKIAAARQAEYESK-DTIAWGSQIRT 325

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y     R + DHR  + +  +E VL G ID +I   L  
Sbjct: 326 YTLQPYRLVKDHRTGMEIGDVEAVLNGEIDPLIRNFLLE 364


>gi|307546434|ref|YP_003898913.1| peptide chain release factor 2 [Halomonas elongata DSM 2581]
 gi|307218458|emb|CBV43728.1| peptide chain release factor 2 [Halomonas elongata DSM 2581]
          Length = 301

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 107/306 (34%), Positives = 164/306 (53%), Gaps = 12/306 (3%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           ++  I   ++   + +DL  +      D++  D    E+ ++  ++ +LE    +  +  
Sbjct: 2   VVDTIDTLERGLNDNRDLLELAEMEE-DADTVDEVSRELESLRADLEKLE----FRRMFA 56

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
              D  +  L+I+AG+GG+EA  +   L RMY R+A    +K +++  S  +  G K   
Sbjct: 57  GEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWAEHHGFKADLIELSAGEVAGIKSAT 116

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIR 223
             I G   F  ++ E+GVHR+ R    ++ GR HTS A+V + PE     +V+I   D+R
Sbjct: 117 VHIQGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFEVEINPSDLR 176

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           +DT R+SG+GGQHVNTTDSAVRITH PTGI+V   S++SQH NR  AMK LRA+L++ E 
Sbjct: 177 VDTYRSSGAGGQHVNTTDSAVRITHEPTGIVVACQSQRSQHANRDFAMKQLRAKLWEHEM 236

Query: 283 KRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
            +     + + + K  IG G    +IR+Y     RI D R  +     E VL G +D  I
Sbjct: 237 DKRNAAKQAAEDSKADIGWG---SQIRSYVLDDQRIKDLRTGVQSSSCEKVLDGDLDQFI 293

Query: 341 NPLLTA 346
              L  
Sbjct: 294 EASLKQ 299


>gi|256424469|ref|YP_003125122.1| peptide chain release factor 2 [Chitinophaga pinensis DSM 2588]
 gi|256039377|gb|ACU62921.1| bacterial peptide chain release factor 2 (bRF- 2) [Chitinophaga
           pinensis DSM 2588]
          Length = 362

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 88/350 (25%), Positives = 159/350 (45%), Gaps = 19/350 (5%)

Query: 11  DLKNRFAEIE---LRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           D+++R A+IE            D   + T     I      + +Y+  +   +D   ++ 
Sbjct: 21  DVQDRIAKIENDKQLTLAPGFWDDNARATSILKEIKVNKFWVDLYENVQTSIEDSAVLLD 80

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                    +       A  + + ELE    +     + +D+   +L I +G GG+E+  
Sbjct: 81  FQKEGEASEEEVAQAYHAATEALDELE----FKSTLNEPEDEMPAVLTINSGAGGTESQD 136

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY  Y   + WKV  +     D  G K     + G   +  +K ESGVHR+ R
Sbjct: 137 WAEMLLRMYRMYGEKQGWKVSEIDVQYGDGAGIKSASLEMDGSFAYGLLKAESGVHRLVR 196

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ R HTS A++ V P   +     +   D+  +  R+ G GGQ+VN  ++AVR+
Sbjct: 197 ISPFDANARRHTSFASIFVYPLVDDTIEIAVNPADLVWEFYRSGGKGGQNVNKVETAVRL 256

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY----DVERKRMANERSANRKLQIGSGD 301
            H+P+GI++     ++Q +NR +A+ +L++RLY        +      +  RK++ GS  
Sbjct: 257 KHVPSGIIIECQQARTQGENREKALTMLKSRLYEEELRKREELKNAANANKRKIEWGS-- 314

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              +IR+Y F     I DHR +  +  ++ V+ G ++  I   L   + +
Sbjct: 315 ---QIRSYVFHPYKMIKDHRTDYEVGNVQPVMDGELEGFIKAYLMMSKGE 361


>gi|34577120|ref|NP_004285.2| peptide chain release factor 1, mitochondrial precursor [Homo
           sapiens]
 gi|114651371|ref|XP_509647.2| PREDICTED: peptide chain release factor 1, mitochondrial isoform 5
           [Pan troglodytes]
 gi|114651373|ref|XP_001150158.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
           [Pan troglodytes]
 gi|114651375|ref|XP_001150218.1| PREDICTED: mitochondrial translational release factor 1 isoform 4
           [Pan troglodytes]
 gi|62512140|sp|O75570|RF1M_HUMAN RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|27503783|gb|AAH42196.1| Mitochondrial translational release factor 1 [Homo sapiens]
 gi|55958420|emb|CAI16615.1| mitochondrial translational release factor 1 [Homo sapiens]
 gi|119629053|gb|EAX08648.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629054|gb|EAX08649.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629056|gb|EAX08651.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629058|gb|EAX08653.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
          Length = 445

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 132/363 (36%), Positives = 210/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I+++I  L NE+   L+PK+  D    ILE+ AG  T
Sbjct: 136 MCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG GV+  +K+E 
Sbjct: 196 GGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEG 255

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 256 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHV 315

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 316 NKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQ 375

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R++DHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 376 VGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAE 435

Query: 355 ASE 357
             +
Sbjct: 436 LLD 438


>gi|29839933|ref|NP_829039.1| peptide chain release factor 2 [Chlamydophila caviae GPIC]
 gi|29834280|gb|AAP04917.1| peptide chain release factor 2 [Chlamydophila caviae GPIC]
          Length = 337

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 113/336 (33%), Positives = 171/336 (50%), Gaps = 11/336 (3%)

Query: 18  EIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRD 77
           E+E +  +           +    ++ +  +IS Y++ K +  +L   + D  + S+   
Sbjct: 3   ELEDQTLKEDFWQDVAHAGKVSERVASLKRQISDYEEFKSKVDNLTFFLNDSEASSDPE- 61

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
             + ++         +  E     L     D   C L I AG GG+E+  +V  LFRMY 
Sbjct: 62  -LREDLEKEFSVCETILAEWETQRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRMYS 120

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+A+  +WK EV+   + D  G K I    SG   +   K E GVHR+ R+   +++ + 
Sbjct: 121 RWASHHQWKAEVIDRQEGDVAGIKHITVKFSGEYAYGYAKAERGVHRLVRISPFDSNAKR 180

Query: 198 HTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           HTS A+V V P    EI++DI   D+RIDT R+SG+GGQHVN TDSAVRITHIPTGI+V 
Sbjct: 181 HTSFASVDVYPEIDDEIEIDIRPNDLRIDTYRSSGAGGQHVNVTDSAVRITHIPTGIIVS 240

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQ 313
             SE+SQ QNR   MK+LRAR+Y    +    ++  +RK   +I  G    +IR Y F  
Sbjct: 241 CQSERSQIQNRESCMKMLRARMYQQVLQERLEKQLLDRKNKKEIAWG---SQIRNYVFQP 297

Query: 314 G-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
              + D R       ++ ++ G  +DD +   L  +
Sbjct: 298 YTLVKDMRTGHETGNVQAMMDGELLDDFVKAYLAEY 333


>gi|62259280|gb|AAX77849.1| unknown protein [synthetic construct]
          Length = 360

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 104/334 (31%), Positives = 171/334 (51%), Gaps = 17/334 (5%)

Query: 19  IELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
           +E+ + +    D       L ++   +  ++       +  +          +     E 
Sbjct: 25  LEMELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETL-------SELLELGEE 77

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            +    E+    + +     ++ +  +     D  +  L+I++G+GG+EA  +   L RM
Sbjct: 78  DESLMQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRM 137

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y R+A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ 
Sbjct: 138 YMRWADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNS 197

Query: 196 RVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           + HTS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+
Sbjct: 198 KRHTSFASVFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIV 257

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNF 311
           V + S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y  
Sbjct: 258 VQSQSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVL 314

Query: 312 SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            Q RI D R  +     + VL G +D  I   L 
Sbjct: 315 DQSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 348


>gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM
           43017]
 gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora
           viridis DSM 43017]
          Length = 368

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 28/367 (7%)

Query: 9   ICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPIISKISIY 52
           + DL  + A++E  M                +     +         + +S   + +   
Sbjct: 9   LKDLGGKLAQVEAVMDLDALRREVAELEEEAARPDLWNDPEVAQRVTSQLSHKQASLRKV 68

Query: 53  DQKKQEEQDLHTV--IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
            + +Q   DL  +  + +   D      A+ E+  + K++  LE       L     D++
Sbjct: 69  SELRQRVDDLGVLHELAEAEGDKASLAEAEAELAQLTKDVNALEV----RTLLSGEYDER 124

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
           + ++ IR+  GG +AA +   L RMY R+A    +  E+   S  ++ G +     ISG 
Sbjct: 125 NAVVTIRSEAGGVDAADWAEMLLRMYLRWAERHNYPTEIYDISYAEEAGIRSATFKISGP 184

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRA 229
            ++  +  E G HR+ R+   +   R  TS A V VLPE  E   V+IP +DIR+D  R+
Sbjct: 185 YLYGTLSVEQGTHRLVRISPFDNQNRRQTSFAHVEVLPEVEEIDHVEIPEKDIRVDVYRS 244

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQ VNTTDSAVRITH+PTGI+V   +EKSQ QN+  AMKVL+A+L   +++    E
Sbjct: 245 SGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQAKLLQRKKEEERAE 304

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             A R      G+   ++R+Y     + + D R +  +     VL G +D  +   +   
Sbjct: 305 LDALRDSGSSWGN---QMRSYVLHPYQLVKDLRTDYEVGNPSAVLDGELDGFLEAGIRWR 361

Query: 348 QAKMIGS 354
           + +   +
Sbjct: 362 KQQAEAA 368


>gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
 gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
 gi|166977372|sp|A8EWG5|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
 gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
          Length = 365

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 175/343 (51%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE---QDLHTVI 66
             L  R  EI+   +     +     T+     + I+ K++ +++         +L+ + 
Sbjct: 27  DILNKRLEEIKNEEASQDFWNDVENATKIGIEKNRILGKLNKFNKAFDSLTGTNELYEMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D  +       +     ++  L       ++  + DD  + I+ I  G GG+E+ 
Sbjct: 87  TAEKDDETLE-----MLYEEASDLENLIKSTEISVMLSNPDDSSNAIVSIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A    +KVE+L     D+ G K++   I G   +  MK E+G+HR+ 
Sbjct: 142 DWASILYRMYLRWAERNDFKVELLDYQAGDEAGIKDVSFIIKGENAYGYMKAENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ + HTS ++V V PE  +     I  +DIRIDT RASG+GGQHVN T+SA+R
Sbjct: 202 RISPFDSNAKRHTSFSSVMVSPEIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHIPTGI+V   +++SQH+N+  A K+L++RLY+ E ++    +    K   G G    
Sbjct: 262 ITHIPTGIVVQCQNDRSQHKNKDSAFKMLKSRLYEYELEKQRASKDGIEKSDNGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y      ++ D R N+    ++ +L G I  +I  +L A
Sbjct: 319 QIRSYVLQPYQQVKDSRSNIGYSNVDAILDGDITKMIEDVLIA 361


>gi|254973803|ref|ZP_05270275.1| peptide chain release factor 2 [Clostridium difficile QCD-66c26]
 gi|260681922|ref|YP_003213207.1| peptide chain release factor 2 [Clostridium difficile CD196]
 gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291]
 gi|260208085|emb|CBA60326.1| peptide chain release factor 2 [Clostridium difficile CD196]
 gi|260211536|emb|CBE01711.1| peptide chain release factor 2 [Clostridium difficile R20291]
          Length = 338

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 175/337 (51%), Gaps = 16/337 (4%)

Query: 20  ELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
           E +M++    +      ++ +E  ++   + +        ++ + L  +  + + DS  R
Sbjct: 8   EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 67

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D+ +      EK             L     D  + IL I AGTGG +A  +   L RMY
Sbjct: 68  DIEKSIESMEEKLSEM-----KIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMY 122

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R++  + +KV++L    + + G K     + G   +  +K E GVHR+ R+   + SG+
Sbjct: 123 IRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGK 182

Query: 197 VHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A++ V PE    I+V+I   D++IDT RASG+GGQHVNTTDSAVRITHIPTG++V
Sbjct: 183 RHTSFASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 242

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFS 312
              +E+SQH N+ RAM++L A+L +++      +    +    QI  G    +IR+Y F 
Sbjct: 243 QCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWG---SQIRSYVFQ 299

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
             + + DHR N     ++ V+ G ID  IN  L  ++
Sbjct: 300 PYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYLKMNK 336


>gi|296452520|ref|ZP_06894217.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
 gi|296881068|ref|ZP_06905011.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
 gi|296258625|gb|EFH05523.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
 gi|296427934|gb|EFH13838.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
          Length = 338

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 174/337 (51%), Gaps = 16/337 (4%)

Query: 20  ELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
           E +M++    +      ++ +E  ++   + +        ++ + L  +  +   DS  R
Sbjct: 8   EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 67

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D+ +      EK             L     D  + IL I AGTGG +A  +   L RMY
Sbjct: 68  DIEKSIESMEEKLSEM-----KIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMY 122

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R++  + +KV++L    + + G K     + G   +  +K E GVHR+ R+   + SG+
Sbjct: 123 IRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGK 182

Query: 197 VHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A++ V PE    I+V+I   D++IDT RASG+GGQHVNTTDSAVRITHIPTG++V
Sbjct: 183 RHTSFASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 242

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFS 312
              +E+SQH N+ RAM++L A+L +++      +    +    QI  G    +IR+Y F 
Sbjct: 243 QCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWG---SQIRSYVFQ 299

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
             + + DHR N     ++ V+ G ID  IN  L  ++
Sbjct: 300 PYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYLKMNK 336


>gi|227874895|ref|ZP_03993048.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
 gi|306818191|ref|ZP_07451922.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
 gi|307701756|ref|ZP_07638770.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
 gi|227844670|gb|EEJ54826.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
 gi|304649155|gb|EFM46449.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
 gi|307613014|gb|EFN92269.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
          Length = 378

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 167/352 (47%), Gaps = 11/352 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD---LHTVIGD 68
           L+ + A++  + S     D      +    +S   S +      K   +D   L  + G+
Sbjct: 29  LQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQTMKTRLEDFAALVELGGE 88

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEI---NYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                + R   Q  +   E   + L  ++       L     D++  ++ IR+G GG +A
Sbjct: 89  ELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYDERFAVVTIRSGAGGVDA 148

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +  +V+ +S  ++ G K     I     + R+  E+G HR+
Sbjct: 149 ADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEIDAPYAYGRLSVEAGTHRL 208

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            RV    A+G+  TS A V V+P       +D+P  DI+ID  R+SG GGQ VNTTDSAV
Sbjct: 209 ARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVFRSSGPGGQSVNTTDSAV 268

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+++   EKSQ QNR  AM+VL++RL  +  ++   ++         S    
Sbjct: 269 RLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEHEKKKELAGDVKAS--WG 326

Query: 304 ERIRTY-NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +++R+Y  + Q  + D R        + V  G +D  I+  +   + + + +
Sbjct: 327 DQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDAFIDEGIRWRKHQQLHA 378


>gi|58039738|ref|YP_191702.1| peptide chain release factor 2 [Gluconobacter oxydans 621H]
 gi|58002152|gb|AAW61046.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Gluconobacter
           oxydans 621H]
          Length = 322

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 162/316 (51%), Gaps = 13/316 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   ++  I  +   + + +   +L  +      +S ++D  Q      E   +    
Sbjct: 1   MRERTTLANQIEGVQRIESEVEGTLELVELAEMEGDESLVQDAVQTLRAIAEDVRK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D   C +E+ AG GG+EA  +   L RMY R+A    +KV  +  S+ 
Sbjct: 57  -REIESLLSGEADSNDCYVEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIEGSEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           +  G K     +SG   +  +K E+GVHR+ R+   +A+ R  TS A+V V P     I+
Sbjct: 116 EQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DT RASG+GGQHVN TDSA+RITHIPTGI+V   +++SQH+NR +AM++L
Sbjct: 176 IDINDSDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEML 235

Query: 274 RARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RAR+Y+ E ++     +     K  IG G    +IR+Y  +  + + D R  +       
Sbjct: 236 RARMYEAELQKREAAAAQTEASKTDIGWG---HQIRSYVLAPYQLVKDLRTGVEKGNPGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +DD ++  L  
Sbjct: 293 VLDGALDDFMSASLAQ 308


>gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           3502]
 gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           3502]
          Length = 325

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 94/329 (28%), Positives = 173/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   ++K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +  GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEETDRFKIE------TLLSGEYDRNNVIMTLHSEVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + V+++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITH+PTGI+V   
Sbjct: 175 SFASIEVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINIFITQYLK 322


>gi|42562784|ref|NP_176032.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|332195261|gb|AEE33382.1| Peptide chain release factor 2 [Arabidopsis thaliana]
          Length = 482

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 167/345 (48%), Gaps = 17/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L  R   +   +++S   D      K++ E+ +++  +  +  ++++  E  D+  + 
Sbjct: 136 KKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLKLA 195

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      +  +  +                  L    +D  SC +E++AG GG+E+ 
Sbjct: 196 KEENDSELESETLKALIDMRRVSKE-----KELEALLSADNDPCSCYIEVQAGAGGTESN 250

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   +  MY+ +A  RK+ V V+  +  +  G K     ++G   +   K E GVHR+ 
Sbjct: 251 DWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLV 310

Query: 187 RVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           R+   ++  R HTS A VAV+P        V+I   D+RI+  R+ G+GGQH NTTDSAV
Sbjct: 311 RISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAV 370

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGD 301
           RI HIPTGI     +E+SQH N+  AM VL++RL  +E  R     + + +   +I  G+
Sbjct: 371 RIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGN 430

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IRTY     R + D R N  +   + VL+G +D  I   L+
Sbjct: 431 ---QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 472


>gi|293394608|ref|ZP_06638902.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
 gi|291422917|gb|EFE96152.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
          Length = 248

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 103/249 (41%), Positives = 145/249 (58%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C L+I+AG+GG+EA  +   L RMY R+A  + +K EV+  SD D  G K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E+GVHR+ R    ++ GR HTS ++V V PE  E  D+DI   
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFVYPEVDEDIDIDINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITH+PT I+V   +++SQH+N+ +A K LRA+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   ++    + K  IG G    +IR+Y     RI D R N+     + VL G +D
Sbjct: 181 YEMQKKNADKQALEDNKSDIGWG---SQIRSYVLDDSRIKDLRTNVETRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 KFIEASLKA 246


>gi|258616656|ref|ZP_05714426.1| peptide chain release factor 2 in translation [Enterococcus faecium
           DO]
          Length = 246

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 97/247 (39%), Positives = 148/247 (59%), Gaps = 8/247 (3%)

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  + I+E+  G GG+E+  +   L RMY R+A    ++VE L     D+ G K +  
Sbjct: 1   PYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTL 60

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
            I G   F  +K E GVHR+ R+   +++ R HTS  +V V+PE    ID++I  +D++I
Sbjct: 61  LIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKI 120

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N T+SAVRITH+PTG +V + +++SQ +NR +AM +L+A+LY +E +
Sbjct: 121 DTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVE 180

Query: 284 RMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDII 340
           +   E +A R  Q  IG G    +IR+Y F     + DHR N+    ++ V+ G +D  I
Sbjct: 181 KKEQEAAALRGEQKEIGWG---SQIRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFI 237

Query: 341 NPLLTAH 347
           +  L  H
Sbjct: 238 DGYLKMH 244


>gi|94500761|ref|ZP_01307290.1| peptide chain release factor 2 [Oceanobacter sp. RED65]
 gi|94427083|gb|EAT12064.1| peptide chain release factor 2 [Oceanobacter sp. RED65]
          Length = 310

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 105/316 (33%), Positives = 171/316 (54%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E +A+  ++  I   D    +  +L  +      D++  D    E+  ++ ++ +LE
Sbjct: 1   MGRERSALEAVVQTIDDMDTGLSDCDELLQM-SVAEDDADSVDEVVSELNELQAKLEKLE 59

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
               +  +     D+ S  L+I+AG+GG+EA  +   + RMY R+   + +KVE++ +S 
Sbjct: 60  ----FRRMFSGEADENSAYLDIQAGSGGTEAQDWAEMILRMYLRWGEAKGFKVELMEASA 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            D  G K       G   F  ++ E+GVHR+ R    ++SGR HTS A+V V PE  +  
Sbjct: 116 GDVAGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFASVFVSPEIDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +    +++SQH+N+ +AMK 
Sbjct: 176 EIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVTQCQNQRSQHKNKDQAMKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           L+A+L+++E ++   +       K  IG G    +IR+Y     RI D R  +     + 
Sbjct: 236 LKAKLFELEMQKRNADTQALEESKSDIGWG---SQIRSYVLDDARIKDLRTGVENRNTQQ 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  +   L A
Sbjct: 293 VLDGALDPFMEASLKA 308


>gi|224043444|ref|XP_002196330.1| PREDICTED: mitochondrial translational release factor 1
           [Taeniopygia guttata]
          Length = 418

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 130/363 (35%), Positives = 208/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K +  L   + ++  ++S     D     L    A +SPI +      + ++E Q+L  
Sbjct: 47  QKYLESLSKEYQQVSHQLSAHSLNDFEQRTLRRRCADLSPIAAAFQEIKEAEREVQELEA 106

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +  + +   + ++ +LA  E  +++K++  L  ++  LL+PK+  D  S ILE+ AG  T
Sbjct: 107 MCTELDSRDEKQLLELALEEKESLDKKMNMLCRKLFQLLVPKEKYDRSSVILEVTAGRTT 166

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ YA  ++W  ++++ +  + GG     A ISG  V+  +K+E 
Sbjct: 167 GGDICQQFTKEMFDMYQSYADYKRWTFDIVNYTPAEIGGLHHAAAHISGENVYRHLKYEG 226

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G HRVQR+P T  S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+G QHV
Sbjct: 227 GTHRVQRIPETGMSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGEQHV 286

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVRI H+PTG+ V    E+SQ  N+  A++ LRA+LY    ++  ++  + RKLQ
Sbjct: 287 NKTDSAVRIVHLPTGLAVECQQERSQQLNKEIALRTLRAKLYQQLVEKQLSQEQSARKLQ 346

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI+     ++ +L G   +D +IN LL   + + +  
Sbjct: 347 LGTRAQSERIRTYNFTQDRVTDHRISYDARNIKEILSGKEALDKLINRLLEFAEIEAVTQ 406

Query: 355 ASE 357
             E
Sbjct: 407 YLE 409


>gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str.
           Langeland]
 gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str.
           Langeland]
 gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str.
           230613]
          Length = 325

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 95/329 (28%), Positives = 174/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   ++K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEETDRFKIE------TLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + V+++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ +LPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITH+PTGI+V   
Sbjct: 175 SFASIEILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   ER  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINMFITQYLK 322


>gi|296272007|ref|YP_003654638.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299]
 gi|296096182|gb|ADG92132.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299]
          Length = 364

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 181/343 (52%), Gaps = 14/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE---QDLHTVI 66
             LK+R  EIE   S     +     T+     + I+SK+S + +  +      +L+ + 
Sbjct: 27  DVLKSRLKEIEELESSQDFWNDVETATKIGIEKNRILSKLSKFKKANESLSGTNELYEMA 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +          +    +E+  L       ++  + DD  + I+ I  G GG+E+ 
Sbjct: 87  LEEKDEDTFE-----LLHGEAEELDNLIRSTEISVMLSNPDDSSNAIISIHPGAGGTESQ 141

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A    +K+EVL   D ++ G K++   I G   +  +K E+G+HR+ 
Sbjct: 142 DWASMLYRMYLRWAERMDFKIEVLDYQDGEEAGLKDVSFIIKGENAYGYLKAENGIHRLV 201

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ + HTS A+V V PE  +     +  +DIRIDT R+SG+GGQHVN T+SA+R
Sbjct: 202 RISPFDSNAKRHTSFASVMVSPEIDDNIDIVVEDKDIRIDTYRSSGAGGQHVNKTESAIR 261

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITHI T I+V   +++SQH+N+  AMK+L++RLY+ E ++    +    K +IG G    
Sbjct: 262 ITHIATNIVVQCQNDRSQHKNKASAMKMLKSRLYEYELEKQQAVKDGVEKSEIGWG---H 318

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR+Y      +I D R N+    +E +L G I  +I  +L A
Sbjct: 319 QIRSYVMQPYQQIKDTRSNIGYSNVEAILDGDITKMIEDVLIA 361


>gi|212692934|ref|ZP_03301062.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855]
 gi|237708323|ref|ZP_04538804.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA]
 gi|237723533|ref|ZP_04554014.1| peptide chain release factor RF-2 [Bacteroides sp. D4]
 gi|265757045|ref|ZP_06090907.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA]
 gi|212664519|gb|EEB25091.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855]
 gi|229438084|gb|EEO48161.1| peptide chain release factor RF-2 [Bacteroides dorei 5_1_36/D4]
 gi|229457544|gb|EEO63265.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA]
 gi|263233544|gb|EEZ19173.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA]
          Length = 371

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 98/372 (26%), Positives = 156/372 (41%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNR------FAEIELRM----------SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R      + +IE ++                D   K   +   +  + 
Sbjct: 1   MITIEQLKDVKERTAALERYLDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y + K    +L         D    +            +  LE +          
Sbjct: 61  KWIDGYREVKTMADELELAFDFCKDDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I  G GG+E+  +   L RMY R+A    +KV V +  D D+ G K +   
Sbjct: 121 D----CVLKINCGAGGTESQDWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMN 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V I    +  D
Sbjct: 177 IEGSFSYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +N+  AM+ LR+ 
Sbjct: 237 TFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMEEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 332

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 105/331 (31%), Positives = 171/331 (51%), Gaps = 6/331 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D   K  +  +  + +  K   +   +++  D  T +     +++       E
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               + +     ++    LL     DD + ++EI  G GG+EA  +   L RMY+RY   
Sbjct: 61  DQLAKLQEEF--HQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDS 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R  K EV +    D+ G K +   ISG+  +  +K E GVHR+ R+   +++ R HTS A
Sbjct: 119 RGLKFEVNNFEPGDEAGLKSVSVRISGKNTYGLLKSEHGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
           +V V+PE    I++DI  +D+RID  R+SG+GGQH+N T SAVRITHIPTGI+  + +++
Sbjct: 179 SVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QNR  AM  +RA+L+ +E ++   E++A +  Q+       +IR+Y F     + DH
Sbjct: 239 SQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQL-DIAWGSQIRSYVFHPYSMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R       +  V+ G +D  I   L    ++
Sbjct: 298 RTGYETADVGGVMDGKLDPFIYAYLQWRLSQ 328


>gi|237752014|ref|ZP_04582494.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376581|gb|EEO26672.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 367

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 178/347 (51%), Gaps = 10/347 (2%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            LKNR  EI          +   K  E          ++  Y+  K    D   +    +
Sbjct: 28  SLKNRILEITELEQTKDFWEDAKKAGELQKEKKRCERQLEKYNNAKSALDDAIELFELSS 87

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D E  ++   E     +E+  +       ++  D  D  + I  I  G GG+E+  +  
Sbjct: 88  DDLESLEVLFAE----SEELESIIKNAEIEVMLSDPLDSNNAIFTITPGAGGTESQDWAS 143

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L+RMY R+A  + +KVE+L   + D+ G K+    I G   +   K E+GVHR+ R+  
Sbjct: 144 MLYRMYLRWAERKDFKVELLDYQEGDEAGIKDASFIIKGENAYGYAKAENGVHRLVRISP 203

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +A+ + HTS ++V V PE  +  +++I  +D+ IDT RASG+GGQHVN T+SAVRITH 
Sbjct: 204 FDANAKRHTSFSSVQVSPEIDDEINIEIDEKDLEIDTYRASGAGGQHVNKTESAVRITHK 263

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           P+GI+V   +++SQH+N+  A+K+L+++LY++ER +   E +   K   G G    +IR+
Sbjct: 264 PSGIVVQCQNDRSQHKNKASALKMLKSKLYELERLKREAESNHTDKGDNGWG---HQIRS 320

Query: 309 YNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           Y  +   ++ D R NL    ++ +L G ID I+  +L     +   S
Sbjct: 321 YVLTPYQQVKDLRSNLAYTNVDAILDGDIDTILEGVLIHINTQKAES 367


>gi|313672869|ref|YP_004050980.1| bacterial peptide chain release factor 2 (brf-2) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 371

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 177/342 (51%), Gaps = 17/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
             LK + + IE +  +           L +E ++I   +       ++ ++   L  +  
Sbjct: 27  EHLKEKLSNIEKQTHDPDFWSSKESKHLLKEQSSIKKFLDDWYYLVRRFEDMDVLLELQE 86

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           +  + +   +           E++++ N+    L+    +D  + IL I +G GG+EA  
Sbjct: 87  EGENVAAEIEENF-------TELKQIVNDFELKLILNGENDINNAILTIHSGAGGTEAND 139

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A  RK+K E+L     D+ G K     I G   +  +K E+GVHR+ R
Sbjct: 140 WANMLLRMYIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGPYAYGYLKGETGVHRLVR 199

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ + HTS A+V VLPE  +     I   D++IDT RA G+GGQHVNTTDSAVRI
Sbjct: 200 LSPFDANNKRHTSFASVFVLPEIEDDVDIVINESDLKIDTFRAGGAGGQHVNTTDSAVRI 259

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           TH+PTGI+V   +E+SQH+N+  A+K+L+++LY++E ++   E++     K +I   +  
Sbjct: 260 THLPTGIVVSCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESSKTEI---NFG 316

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
            +IR+Y       + D R        + VL G +DD I   L
Sbjct: 317 SQIRSYVLHPYKMVKDLRTRHETGNPDAVLDGELDDFIRSYL 358


>gi|325280722|ref|YP_004253264.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712]
 gi|324312531|gb|ADY33084.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712]
          Length = 370

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+  ++ R                  E+E+R       +   +  +    +  + 
Sbjct: 1   MITTDQLKAVEERSGALRRYLDIDRKKIELEEVEMRTQAPDFWNDAKQAEKVMKQVRELK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I   +   +   DL+ +           +          + + ELE       + +  
Sbjct: 61  GWIEGCEAVSRSVDDLNVLFDFAKEGEATEEEVDTHYAETLQLVEELEL----KNMLRGE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D  SCIL+I +G GG+E+  +   L RMY R+A    +K+ V +  + D+ G K +   
Sbjct: 117 ADQMSCILKINSGAGGTESQDWASMLMRMYMRWAEANNYKLTVSNIQEGDEAGIKTVTLQ 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRID 225
           + G   +  +K E+GVHR+ RV    A G+  TS A+V V P   +     I   DI  D
Sbjct: 177 LEGDFAYGYLKGENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDSIEIAINAADISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+ G+GGQ+VN  ++ VR+ +             ++  +  +SQ  NR  AM++LR+ 
Sbjct: 237 TFRSGGAGGQNVNKVETGVRLRYNYKDPDTGETREILIENTETRSQLDNRENAMRLLRSM 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD+E +R   E+      K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDMELQRRMAEQQKIESNKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVGGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 325

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 94/329 (28%), Positives = 174/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   ++K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEETDRFKIE------TLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + ++++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ +LPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITHIPTGI+V   
Sbjct: 175 SFASIEILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINIFITQYLK 322


>gi|15965084|ref|NP_385437.1| peptide chain release factor 2 [Sinorhizobium meliloti 1021]
 gi|307315054|ref|ZP_07594639.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
 gi|307317885|ref|ZP_07597323.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
 gi|15074263|emb|CAC45910.1| Probable peptide chain release factor 2 (RF-2) protein
           [Sinorhizobium meliloti 1021]
 gi|306896647|gb|EFN27395.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
 gi|306898893|gb|EFN29543.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
          Length = 342

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 10/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
             +  +    +   +  +       +   I+   + +Q+  D   +I     + +   +A
Sbjct: 2   NNKAEDPSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGEEEGDSAIVA 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + E    +        +     +     D     LE+ +G GG+E+  +   L RMY R+
Sbjct: 62  EAEEALRQLRGEA--AKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +KVE++   D ++ G K     + G   +  +K ESGVHR+ R+   +++ R HT
Sbjct: 120 AERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHT 179

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S +++ V P   E   +DI   D RIDT R+SG+GGQHVNTTDSAVRITH+P+GI+V   
Sbjct: 180 SFSSIWVYPVVDESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR 315
            E+SQH+NR +A  +LRARLY+ E K+   A    A  K  IG G    +IR+Y     +
Sbjct: 240 QERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWG---HQIRSYVLQPYQ 296

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + D R  +       VL G +++ +   L   
Sbjct: 297 LVKDLRTGVESSSPGDVLDGELNEFMEAALAHR 329


>gi|255091190|ref|ZP_05320668.1| peptide chain release factor 2 [Clostridium difficile CIP 107932]
 gi|255099304|ref|ZP_05328281.1| peptide chain release factor 2 [Clostridium difficile QCD-63q42]
 gi|255305089|ref|ZP_05349261.1| peptide chain release factor 2 [Clostridium difficile ATCC 43255]
 gi|255312847|ref|ZP_05354430.1| peptide chain release factor 2 [Clostridium difficile QCD-76w55]
 gi|255515606|ref|ZP_05383282.1| peptide chain release factor 2 [Clostridium difficile QCD-97b34]
 gi|255648700|ref|ZP_05395602.1| peptide chain release factor 2 [Clostridium difficile QCD-37x79]
 gi|306518820|ref|ZP_07405167.1| peptide chain release factor 2 [Clostridium difficile QCD-32g58]
          Length = 339

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 175/337 (51%), Gaps = 16/337 (4%)

Query: 20  ELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
           E +M++    +      ++ +E  ++   + +        ++ + L  +  + + DS  R
Sbjct: 9   EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 68

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D+ +      EK             L     D  + IL I AGTGG +A  +   L RMY
Sbjct: 69  DIEKSIESMEEKLSEM-----KIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMY 123

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R++  + +KV++L    + + G K     + G   +  +K E GVHR+ R+   + SG+
Sbjct: 124 IRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGK 183

Query: 197 VHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A++ V PE    I+V+I   D++IDT RASG+GGQHVNTTDSAVRITHIPTG++V
Sbjct: 184 RHTSFASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 243

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFS 312
              +E+SQH N+ RAM++L A+L +++      +    +    QI  G    +IR+Y F 
Sbjct: 244 QCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWG---SQIRSYVFQ 300

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
             + + DHR N     ++ V+ G ID  IN  L  ++
Sbjct: 301 PYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYLKMNK 337


>gi|91081965|ref|XP_967739.1| PREDICTED: similar to AGAP012082-PA, partial [Tribolium castaneum]
          Length = 383

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 191/351 (54%), Gaps = 13/351 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  L++ +  +          + Y   +  +  + P+I+ ++      +  Q+L  ++ +
Sbjct: 42  IKRLEHEYEGLLKL-------NNYTANSRFH-QLQPLINALNERKDAVENIQNLSELLNE 93

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D       +        +  + E  +  +L     D+  S +LE+ AG GG EA LF
Sbjct: 94  KDDDIRKLAEEEKLTFESRIKSID-EKLLEAILPSDKEDECNSIVLEVNAGVGGQEAMLF 152

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
             +LF MY  +A  + W+ ++   S  D GG +   A I+G  VF   K E+GVHRVQR+
Sbjct: 153 ANELFEMYCNFAEHQGWETQIADYSPVDIGGIRHASALINGPQVFQFFKHEAGVHRVQRI 212

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P TE +GR+HTS  +V  LP+  EI+V+I  +D++I+T RASG+GGQHVNTT+SAVR+TH
Sbjct: 213 PTTEKAGRIHTSTVSVVALPQPTEIEVNIDNKDLKIETKRASGAGGQHVNTTESAVRVTH 272

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG  V    ++SQ +NR  A+  LRA +Y  + +         RK Q+ S  R+E+IR
Sbjct: 273 LPTGFSVECQVDRSQVKNRQIALAKLRALIYQRDLEEQIARNENMRKNQVRSNFRNEKIR 332

Query: 308 TYNFSQGRITDHRI-NLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSA 355
           TYNF Q RITDHR+    ++ L+  LQG   +  +I  L   ++ + + + 
Sbjct: 333 TYNFPQDRITDHRLQGCNVHNLKGFLQGNDALGSLIKKLDQQYKIETLLNL 383


>gi|270007320|gb|EFA03768.1| hypothetical protein TcasGA2_TC013879 [Tribolium castaneum]
          Length = 387

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 191/351 (54%), Gaps = 13/351 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  L++ +  +          + Y   +  +  + P+I+ ++      +  Q+L  ++ +
Sbjct: 42  IKRLEHEYEGLLKL-------NNYTANSRFH-QLQPLINALNERKDAVENIQNLSELLNE 93

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D       +        +  + E  +  +L     D+  S +LE+ AG GG EA LF
Sbjct: 94  KDDDIRKLAEEEKLTFESRIKSID-EKLLEAILPSDKEDECNSIVLEVNAGVGGQEAMLF 152

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
             +LF MY  +A  + W+ ++   S  D GG +   A I+G  VF   K E+GVHRVQR+
Sbjct: 153 ANELFEMYCNFAEHQGWETQIADYSPVDIGGIRHASALINGPQVFQFFKHEAGVHRVQRI 212

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P TE +GR+HTS  +V  LP+  EI+V+I  +D++I+T RASG+GGQHVNTT+SAVR+TH
Sbjct: 213 PTTEKAGRIHTSTVSVVALPQPTEIEVNIDNKDLKIETKRASGAGGQHVNTTESAVRVTH 272

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG  V    ++SQ +NR  A+  LRA +Y  + +         RK Q+ S  R+E+IR
Sbjct: 273 LPTGFSVECQVDRSQVKNRQIALAKLRALIYQRDLEEQIARNENMRKNQVRSNFRNEKIR 332

Query: 308 TYNFSQGRITDHRI-NLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSA 355
           TYNF Q RITDHR+    ++ L+  LQG   +  +I  L   ++ + + + 
Sbjct: 333 TYNFPQDRITDHRLQGCNVHNLKGFLQGNDALGSLIKKLDQQYKIETLLNL 383


>gi|291295687|ref|YP_003507085.1| LigA [Meiothermus ruber DSM 1279]
 gi|290470646|gb|ADD28065.1| LigA [Meiothermus ruber DSM 1279]
          Length = 365

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 98/357 (27%), Positives = 169/357 (47%), Gaps = 17/357 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I   + R  E++ ++++    +      K+++E A +   +      +   Q   +L  
Sbjct: 18  DIAGKEARLKELDRQINDPSLWNDPAHARKISQEAARLRKAVEGYRRLESDLQGLLELWP 77

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
            +     +    +L +      E   + L               + + I+ I+ G GG+E
Sbjct: 78  ELSPEEREQMQPELERAGRELEELYHQTL---------LGFPYAENAAIVTIKPGAGGTE 128

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L+RMY R+A  + + +E++      + G  +    + G   +  +  E+GVHR
Sbjct: 129 ACDWAQMLYRMYTRFAERKGFSLELVDLEPGAEAGIDQAQFIVRGENAYGLLSAEAGVHR 188

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R     A G+  TS A V V+PE  E  D+ I  ED+RID MR+ G GGQ VNTTDSA
Sbjct: 189 LVRPSPFNAQGKRQTSFAAVEVMPEVDESVDIQIAPEDLRIDVMRSQGKGGQGVNTTDSA 248

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VR+ H+PTGI V     +SQ +N+  A+ +LR++L+++E K+   E +   K +    + 
Sbjct: 249 VRVVHLPTGIFVKCQVTRSQQKNKEMALNILRSKLFEIEWKKKQEELARL-KGESRPIEW 307

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH--QAKMIGSASE 357
             +IR+Y   +  I DHR     +  E VL G ++ +I   L     + + + SA E
Sbjct: 308 GSQIRSYVLDKQYIKDHRTGEMRHDPENVLDGDLESLIWAGLEWKAGRREAVASADE 364


>gi|329667680|gb|AEB93628.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii DPC
           6026]
          Length = 332

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 104/327 (31%), Positives = 167/327 (51%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D   +        + +  K   + Q + +  D  T +    +D +     ++ 
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              +        ++    LL  D  D  + ++EI  G GG+EA  +   L RMY+RYAA 
Sbjct: 61  EEMVSLSQSF--HDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAAS 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
              K E+      ++ G K +   I G+  F  +K E+GVHR+ R+   +++ R HTS A
Sbjct: 119 HDLKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE  +  +VDI  +D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QNR  AM +LRA+L+ +E ++   +    +  Q   G    +IR+Y F     + DH
Sbjct: 239 SQLQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIG-FGSQIRSYVFHPYNMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R N     +  V+ G +D+ I   L  
Sbjct: 298 RTNFESSDVNGVMDGKLDNFIYAYLQW 324


>gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 376

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 169/346 (48%), Gaps = 16/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +  +  +    +      KL  E   +   I+ +   +Q+  +  +L  + 
Sbjct: 26  DQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELG 85

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +    S +++          +  R          +     D     LE+ +G GG+E+ 
Sbjct: 86  EEEGDQSVVKEAEDTLKALKAEAAR-----RQVEAMLSGEADGNDTYLEVHSGAGGTESQ 140

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  +++KVE+L   D ++ G K     + G   +  +K ESGVHR+ 
Sbjct: 141 DWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLV 200

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS +++ V P     I ++I   D RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 201 RISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVR 260

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDR 302
           ITHIPTGI+V    E+SQH+NR +A  +LRAR+Y+ E K+   A    A  K +IG G  
Sbjct: 261 ITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWG-- 318

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y     + + D R  +     + VL G +++ +   L   
Sbjct: 319 -HQIRSYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALAHR 363


>gi|15827278|ref|NP_301541.1| peptide chain release factor 2 [Mycobacterium leprae TN]
 gi|221229756|ref|YP_002503172.1| peptide chain release factor 2 [Mycobacterium leprae Br4923]
 gi|6093957|sp|O32885|RF2_MYCLE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790917|sp|B8ZUV0|RF2_MYCLB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2326693|emb|CAB11005.1| peptide chain release factor 2 [Mycobacterium leprae]
 gi|13092827|emb|CAC30176.1| putative peptide chain release factor 2 [Mycobacterium leprae]
 gi|219932863|emb|CAR70761.1| putative peptide chain release factor 2 [Mycobacterium leprae
           Br4923]
          Length = 374

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 100/350 (28%), Positives = 162/350 (46%), Gaps = 9/350 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R  ++E   S+    D  ++     + +S    ++   ++ ++   DL  +  
Sbjct: 24  DVEGLRTRIEKLEHEASDPKLWDDQVRAQRVTSELSHAQGELRRIEELRRRLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEI----RELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               +      + +E  A         R          L     D++  ++ IR+G GG 
Sbjct: 84  LAAEERAAAAASGMEAFAEADAELKALRVDIEATEVRTLLSGEYDEREALITIRSGAGGV 143

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +AA +   L RMY R+A   K+ VEVL +S  ++ G K     +     +  +  E G H
Sbjct: 144 DAADWAEMLMRMYIRWAEQHKYGVEVLDTSYAEEAGVKSATFAVHAPFAYGTLASEQGTH 203

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDS
Sbjct: 204 RLVRISPFDNQSRRQTSFAEVEVLPVVEITDHIDIPEGDVRVDVYRSSGPGGQSVNTTDS 263

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH+PTG++V   +EKSQ QN++ AM+VL+A+L + +R     E  A +    G   
Sbjct: 264 AVRLTHVPTGLVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAELDALKGR--GGSS 321

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              +IR+Y     + + D R    +     VL G ID  +   +     +
Sbjct: 322 WGNQIRSYVLHPYQMVKDLRNEYEVGNPTAVLDGDIDGFLEAGIRWRNRR 371


>gi|255654235|ref|ZP_05399644.1| peptide chain release factor 2 [Clostridium difficile QCD-23m63]
          Length = 339

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 174/337 (51%), Gaps = 16/337 (4%)

Query: 20  ELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
           E +M++    +      ++ +E  ++   + +        ++ + L  +  +   DS  R
Sbjct: 9   EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 68

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D+ +      EK             L     D  + IL I AGTGG +A  +   L RMY
Sbjct: 69  DIEKSIESMEEKLSEM-----KIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMY 123

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R++  + +KV++L    + + G K     + G   +  +K E GVHR+ R+   + SG+
Sbjct: 124 IRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGK 183

Query: 197 VHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A++ V PE    I+V+I   D++IDT RASG+GGQHVNTTDSAVRITHIPTG++V
Sbjct: 184 RHTSFASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 243

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFS 312
              +E+SQH N+ RAM++L A+L +++      +    +    QI  G    +IR+Y F 
Sbjct: 244 QCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWG---SQIRSYVFQ 300

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
             + + DHR N     ++ V+ G ID  IN  L  ++
Sbjct: 301 PYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYLKMNK 337


>gi|150015324|ref|YP_001307578.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
           8052]
 gi|149901789|gb|ABR32622.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
           8052]
          Length = 324

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 106/328 (32%), Positives = 169/328 (51%), Gaps = 7/328 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M ES   D   K  E       I  KI  +D+ K + +D+  +      D E      I+
Sbjct: 1   MQESGFWDNIKKAEEVTKKSKSIKDKIESFDKLKSQIEDIEVLKEIMEDDDEESANEIIQ 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
            L   +      ++ N  +L     D  + IL +  G GG++A  +   L RMY R+   
Sbjct: 61  TLRDIQAQ---IDDYNMKVLLCGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEK 117

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + +E L     D+ G K +   ++G   +  +K E G+HR+ R+    A+G+  TS A
Sbjct: 118 QGYSIETLDLLPGDEAGIKSVTLKVTGEYAYGYLKAEKGIHRLVRISPYNANGKRQTSFA 177

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           ++ VLPE   E D++I  +D++IDT R+ G+GGQHVN TDSAVRITHIPTG++V   +E+
Sbjct: 178 SMEVLPELTKEQDIEIRSDDLKIDTYRSGGAGGQHVNKTDSAVRITHIPTGVVVQCQNER 237

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ  NR  AM++L+++L +++ +R   E+  +   ++       +IR+Y F     + DH
Sbjct: 238 SQFSNRDTAMEMLKSKLVELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N+    +  V+ G ID  IN  L   
Sbjct: 297 RTNVETSNVTSVMDGEIDMFINAYLKQQ 324


>gi|269976501|ref|ZP_06183486.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
 gi|269935302|gb|EEZ91851.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
          Length = 378

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 167/352 (47%), Gaps = 11/352 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD---LHTVIGD 68
           L+ + A++  + S     D      +    +S   S +      K   +D   L  + G+
Sbjct: 29  LQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQTMKTRLEDFAALVELGGE 88

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEI---NYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                + R   Q  +   E   + L  ++       L     D++  ++ IR+G GG +A
Sbjct: 89  ELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYDERFAVVTIRSGAGGVDA 148

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +  +V+ +S  ++ G K     I     + R+  E+G HR+
Sbjct: 149 ADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEIDAPYAYGRLSVEAGTHRL 208

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            RV    A+G+  TS A V V+P       +D+P  DI+ID  R+SG GGQ VNTTDSAV
Sbjct: 209 ARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVFRSSGPGGQSVNTTDSAV 268

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTGI+++   EKSQ QNR  AM+VL++RL  +  ++   ++         S    
Sbjct: 269 RLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEHEKKKELAGDVKAS--WG 326

Query: 304 ERIRTY-NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +++R+Y  + Q  + D R        + V  G +D  I+  +   + + + +
Sbjct: 327 DQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDTFIDEGIRWRKHQQLHA 378


>gi|327403921|ref|YP_004344759.1| peptide chain release factor 2 (bRF-2) [Fluviicola taffensis DSM
           16823]
 gi|327319429|gb|AEA43921.1| bacterial peptide chain release factor 2 (bRF-2) [Fluviicola
           taffensis DSM 16823]
          Length = 360

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 167/365 (45%), Gaps = 27/365 (7%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ ++  R   I                EL+  +    D   K   E   I  + 
Sbjct: 1   MVNSDQLKEINQRIDAIASYLKIPEKEMQLRESELKTQDPNFWDDPKKAEAEMKDIRGLK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y + K +  DL  +I      +           ++   I E+E       +    
Sbjct: 61  FWIESYTRLKSQSDDLEVLIEFVKEGAAEESECDEAYQSMLTTIEEVEL----KNMLSGE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D  S +++I AG GG+EA  + G L RMY  +A    +KV+ L+  + D  G K +   
Sbjct: 117 EDALSAVIQITAGAGGTEACDWAGMLMRMYIMWAEKSGYKVKELNFQEGDVAGIKTVTLE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRID 225
           I G   F  +K E+G+HR+ RV    + G+  TS A+V V P   +         DI  +
Sbjct: 177 IEGEFAFGYLKGENGIHRLVRVSPYNSQGKRMTSFASVYVYPSVDDTIEIYVNPADITFE 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+ G+GGQ+VN  ++AVR+ H  +GI++  S  +SQ  N+ +AM++LR++LY++E ++
Sbjct: 237 TFRSGGAGGQNVNKVETAVRLRHAASGIIIENSESRSQLANKEKAMQLLRSQLYEIELRK 296

Query: 285 MANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINP 342
            A  R      K +I  G    +IR+Y     R+ DHR + ++   + VL G +   +  
Sbjct: 297 RAESRDQIEAGKKKIEWG---SQIRSYVLDDRRVKDHRTDYSVNDPDKVLDGDLLPFLKS 353

Query: 343 LLTAH 347
            L  +
Sbjct: 354 FLMMY 358


>gi|156932658|ref|YP_001436574.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530912|gb|ABU75738.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894]
          Length = 293

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 102/297 (34%), Positives = 160/297 (53%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q   +   L  +  + + +    +       A   ++     ++ +  +     D   C 
Sbjct: 3   QGLDDVAGLLELAVEADDEETFNEAV-----AELDQLEAKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K     ISG   F
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAF 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTG +    +++SQH+N+ +AMK ++A+LY++E ++   E+  
Sbjct: 178 GGQHVNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 LEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|166363701|ref|YP_001655974.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
 gi|166086074|dbj|BAG00782.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
          Length = 330

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 7/324 (2%)

Query: 26  SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLA 85
               D      +    ++   S +  Y     + +D   +I     +S+   L +     
Sbjct: 5   PTFWDNLDTAQKTLQELNECKSSLETYQGWCGQLEDTKAIIELLELESDRTLLEEATDNL 64

Query: 86  IEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKW 145
              +     +      L     D K  +L I AG GG++A  +   L RMY R+A  + +
Sbjct: 65  THLQHDL--DRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGY 122

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KV +   S+ D+ G K +   I+G   +  +K E G HR+ R+    A+G+  TS A V 
Sbjct: 123 KVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVE 182

Query: 206 VLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
           V+P      + V+IP +D+ I T R+ G GGQ+VN  ++AVR+ H+PTGI V  + E+SQ
Sbjct: 183 VMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQ 242

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRI 321
            QN+ +A+ +L+A+L  + R++ A   +  R   +       +IR Y F   + + D R 
Sbjct: 243 LQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVE-AAWGNQIRNYVFHPYQLVKDLRS 301

Query: 322 NLTLYKLEYVLQGYIDDIINPLLT 345
           N+    +  V+ G +D  I   L 
Sbjct: 302 NVETTDVTRVMNGDLDSFIEAYLR 325


>gi|225165725|ref|ZP_03727521.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2]
 gi|224800034|gb|EEG18467.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2]
          Length = 341

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 106/332 (31%), Positives = 162/332 (48%), Gaps = 13/332 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  S   D   +  +       +   +  +  + +K  +   L+ +I +  S +E  +  
Sbjct: 1   MGASDFWDNNERAQKHINKVNGLKRAVLPLVAFRKKVDDLDALNELI-EAGSPAEQEEFG 59

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                     I EL +++          D  + I  I+AG GG+E+  +   LFRMY R+
Sbjct: 60  AELTAQAAAMIGEL-DDLEINAFLTGQFDRNNAIFSIQAGAGGTESNDWADMLFRMYTRW 118

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R + VEV      D  G  +    I G   +   K E GVHR+ R+   +++ R HT
Sbjct: 119 AERRGFTVEVQDVQPGDQAGISKATLLIKGENAYGYCKAERGVHRLVRISPFDSNQRRHT 178

Query: 200 SAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG-IMVTS 257
           S   V V+     EI ++IP ++IR+D  R+SG GGQ VNTTDSAVR+THIPTG ++V  
Sbjct: 179 SFCAVDVIAEINDEIKIEIPEDEIRVDVYRSSGKGGQGVNTTDSAVRLTHIPTGLVVVCQ 238

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGR 315
           +E+SQ +N+  AM +L+ARLY+ ++     E       K +IG G    +IR+Y     +
Sbjct: 239 NERSQIKNKASAMSILKARLYEKKQDEQRAEMDKFYGEKGEIGWGA---QIRSYVLQPYQ 295

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + D R  +     + VL G ID  IN  L A
Sbjct: 296 MVKDLRTGVNTSDTQGVLDGDIDRFINGWLRA 327


>gi|226226984|ref|YP_002761090.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27]
 gi|226090175|dbj|BAH38620.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27]
          Length = 335

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 107/333 (32%), Positives = 168/333 (50%), Gaps = 16/333 (4%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +      ++ ++   +   +        +    ++L  ++          DL 
Sbjct: 1   MADPAFWNDQEHAREIVQQVKVLKGWVEPSDSLQSRIDSARELDELLSLEPDKGMNADLD 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q     +               L +  DD +   LEI AG GG+EA  +   L R+Y R+
Sbjct: 61  QEVQRILADLDA-----FELKSLLRGNDDYRDAQLEISAGAGGTEAQDWASMLLRLYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + + +EVL  SD ++ G K  V  I G+  +  ++ ESGVHR+ R+   ++  R HT
Sbjct: 116 AERKGFDLEVLDLSDGEEAGIKGAVLEIKGQYAYGFLRPESGVHRLVRISPFDSQARRHT 175

Query: 200 SAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V P    EI+++I  ED+RID  RASG+GGQHVN T SAVRITHIP+GI+  + 
Sbjct: 176 SFASVFVYPVVNEEINIEIREEDLRIDVYRASGAGGQHVNKTSSAVRITHIPSGIVCASQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQG- 314
            E+SQ +N+  AMK L+ RLY +E ++ A  ++A    K  +  G    +IR+Y F    
Sbjct: 236 QERSQFKNKATAMKQLKNRLYQLEIEKQAAVKAAFDANKQDVTFG---SQIRSYVFQPYT 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR  L +  ++ V+ G ID  I+  L   
Sbjct: 293 MVNDHRSELKIADVQKVMDGDIDPFIHAYLKQE 325


>gi|42518772|ref|NP_964702.1| peptide chain release factor 2 [Lactobacillus johnsonii NCC 533]
 gi|41583058|gb|AAS08668.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii NCC
           533]
          Length = 332

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 103/327 (31%), Positives = 166/327 (50%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D   +        + +  K   + Q + +  D  T +    +D +     ++ 
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
              +        ++    LL  D  D  + ++EI  G GG+EA  +   L RMY+RYA  
Sbjct: 61  EEMVSLSQSF--HDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAVS 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
              K E+      ++ G K +   I G+  F  +K E+GVHR+ R+   +++ R HTS A
Sbjct: 119 HDLKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE  +  +VDI  +D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIITSSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QNR  AM +LRA+L+ +E ++   +    +  Q   G    +IR+Y F     + DH
Sbjct: 239 SQLQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIG-FGSQIRSYVFHPYNMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R N     +  V+ G +D+ I   L  
Sbjct: 298 RTNFETSDVNGVMDGKLDNFIYAYLQW 324


>gi|326491925|dbj|BAJ98187.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 465

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 161/343 (46%), Gaps = 17/343 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L  R  ++ + + +    +  +   K++ E   +   I  ++ ++Q+  E  D+  +  D
Sbjct: 121 LLERSKQLAVVLEKPDLWEDPVFAGKVSREQGELMGKIKSVNQFEQQLMEHIDMLRLARD 180

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +    +  +       +             L    +D   C +E++AG GG E+  +
Sbjct: 181 EGDNELETESMRALADMRREAKE-----KELNALLSGDNDPYPCFIEVQAGAGGVESMDW 235

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              +  MY+ +A  R ++V V+     +  G K     + G   F   K E GVHR+ R+
Sbjct: 236 AAMVMNMYKSWAQRRGYRVTVIEEMPGELAGIKRATIKVDGEYAFGYAKSEIGVHRLVRI 295

Query: 189 PATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
              ++  R HTS A VAV+P    +     I   D+RI+  R+ G GGQH NTT+SAVRI
Sbjct: 296 SPFDSGKRRHTSFAAVAVIPILGESSSRYQINESDLRIERFRSGGPGGQHANTTESAVRI 355

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
            HIPTG      +E+SQH NR  AM VL++RL  +E  R A   + + +   +I  G+  
Sbjct: 356 VHIPTGTTATCQNERSQHMNRASAMAVLQSRLDQLEITRQAQMNAEHTQSLSEISWGN-- 413

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y     R + D R N  +   + VL+G +DD I   L+
Sbjct: 414 -QIRSYVLQPYRMVKDLRTNYEVSDPDSVLEGDLDDFILSFLS 455


>gi|27363990|ref|NP_759518.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6]
 gi|37678852|ref|NP_933461.1| protein chain release factor B [Vibrio vulnificus YJ016]
 gi|320157369|ref|YP_004189748.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O]
 gi|27360107|gb|AAO09045.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6]
 gi|37197593|dbj|BAC93432.1| protein chain release factor B [Vibrio vulnificus YJ016]
 gi|319932681|gb|ADV87545.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O]
          Length = 289

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 101/293 (34%), Positives = 158/293 (53%), Gaps = 12/293 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
            + + L  +  +        ++         + + E    + +  +     D   C +++
Sbjct: 2   DDVEGLLELAIEAEDQETFDEIGPE-----LEALEEKLAGLEFRRMFSGAHDSSDCYIDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   + RMY R+A  + +K EV+  S+ D  G K +   I G   +  +
Sbjct: 57  QAGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGDVAGLKSVTVRIIGDYAYGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS A+  V PE  E  D+DI   D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEIDENIDIDINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR- 293
           HVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E ++   E+ AN  
Sbjct: 177 HVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANED 236

Query: 294 -KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 237 AKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 286


>gi|114565810|ref|YP_752964.1| peptide chain release factor 2 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336745|gb|ABI67593.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 334

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 113/333 (33%), Positives = 183/333 (54%), Gaps = 12/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKK---QEEQDLHTVIGDHNSDSEIR 76
           + +  +        +  E    IS +   +++Y +     Q   D+  +  + N ++  +
Sbjct: 2   QKKTLQENFWSERKEAQEILKQISKLQENLNLYKELMGTAQYLNDILEMAEEENDETLWQ 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           +  +  +   ++           L+L     D  + I+ + AG GG+EA  +V  LFRMY
Sbjct: 62  ESVRELLALQKRFRE-----FELLVLFSGPHDYSNAIVSLHAGAGGTEAQDWVEILFRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A    + +EVL   D D+ G K +   + G   F ++K E GVHR+ R+   ++SGR
Sbjct: 117 SRWAENSSYSIEVLDFLDGDEAGIKSVTFLVRGPYAFGKLKCEEGVHRLIRISPFDSSGR 176

Query: 197 VHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A+++VLPE  E  +V I +ED+R+DT R+SG+GGQH+N TDSAVRITH+P+GI+V
Sbjct: 177 RHTSFASLSVLPEINEDIEVLINVEDLRVDTYRSSGAGGQHINKTDSAVRITHLPSGIVV 236

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ- 313
              +E+SQH NRL AMK+L+A+LY +++K   ++  +  K          +IRTY  +  
Sbjct: 237 QCQNERSQHANRLAAMKILQAKLYALKQKEAQDKLQSI-KGDYKEIAWGSQIRTYTLNPF 295

Query: 314 GRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             I DHR N+ +  ++ VL G +DD+I   L  
Sbjct: 296 NLIKDHRTNMEIGNVQAVLDGELDDLIFACLHW 328


>gi|47218188|emb|CAF97052.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 409

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 143/329 (43%), Positives = 205/329 (62%), Gaps = 5/329 (1%)

Query: 30  DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKE 89
           D         + ++P+I  I   + K+ E  +  T++ D   D  +R+LA+ E     K+
Sbjct: 79  DELRAKRTRVSLLAPLIRSIRELETKQMEMVETETLLEDE--DPALRELAETERENCVKD 136

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           I++L  +I  LL+P++  D    +LE+ AG GG EA LF  ++F MY+ YA    W  + 
Sbjct: 137 IQDLSKKILDLLIPEEEADLNELVLEVTAGVGGQEAMLFTAEVFDMYQGYAQHHGWSFDT 196

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           L    +D GG +   A+ISGR  + +MKFE GVHRVQRVP TE  GR+HTS  TVAVLP+
Sbjct: 197 LEYMTSDLGGLRHASASISGRLCYKKMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAVLPQ 256

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLR 268
             EI   I  +D+RIDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +NR +
Sbjct: 257 PTEISFTINQKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVAECQQERSQLKNREK 316

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKL 328
           AMK LRA+LY ++ +   ++R   RK+QIG+  RSE+IRTYNF+Q RITDHRI +TL+ +
Sbjct: 317 AMKALRAKLYSLKLEEETSKRYNQRKIQIGTKGRSEKIRTYNFAQDRITDHRIGMTLHDI 376

Query: 329 EYVLQGY--IDDIINPLLTAHQAKMIGSA 355
           +  L G   +D++ + +      + +   
Sbjct: 377 KNFLLGEDLLDEMNSSVCEFSNQEALMEL 405


>gi|167032113|ref|YP_001667344.1| peptide chain release factor 2 [Pseudomonas putida GB-1]
 gi|166858601|gb|ABY97008.1| peptide chain release factor 2 [Pseudomonas putida GB-1]
          Length = 304

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++ ++  +        + QDL  +  + N ++ + D+        E        ++ +  
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDENAVGDVVAELEELEENL-----AKLEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S+ +  G K
Sbjct: 57  MFSGEMDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  +++I   
Sbjct: 117 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPS 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA+LY+
Sbjct: 177 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 236

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++     +   + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 237 LEMQKRNAASQALEDSKSDIGWG---HQIRSYVLDDSRIKDLRTGVERSDCQKVLDGDLD 293

Query: 338 DIINPLLTA 346
             +   L  
Sbjct: 294 QYLEASLKQ 302


>gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
 gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
          Length = 372

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 10/352 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   A++  +++     D     T     +S +  +++ + +     +DL  +  
Sbjct: 25  DLDAMRKEIADLGEQVAAPDLWDDQDNATRVTGRLSLLQGELNKFTELSSRIEDLELMVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D++    ++ E+  ++K +  LE       L     D +  ++ IR+G GG +A
Sbjct: 85  MAQEEGDADTLAESEAELGRVKKAVESLEI----RTLLSGEYDSREALVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A   K+ VEV  +S  ++ G K     I     +  +  E+G HR+
Sbjct: 141 ADFAEMLMRMYVRWAERNKYPVEVFDTSYAEEAGLKSATFAIHAPYAYGTLSVEAGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V V+P      +++I   DI++D  R+SG GGQ VNTTDSAV
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIKVDVYRSSGPGGQSVNTTDSAV 260

Query: 245 RITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           R+THIPTG +V+   +        A  ++        +K     +    K  +      +
Sbjct: 261 RLTHIPTGTVVSCQNEKSQLQNKAAAMIVLKAKLLALKKAEEEAQLKELKGDVA-ASWGD 319

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ-AKMIGS 354
           ++R Y  +  + + D R    +   + V  G ID  +   +   + A+    
Sbjct: 320 QMRNYVLNPYQIVKDLRTTYEVGNPQAVFDGDIDGFLEAGIRWRRGAEKAEQ 371


>gi|33864328|ref|NP_895888.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9313]
 gi|33641108|emb|CAE22237.1| peptide-chain-release factor RF-2 [Prochlorococcus marinus str. MIT
           9313]
          Length = 375

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 6/342 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  R  ++E   ++    +      ++   +  + ++++     +    D    + 
Sbjct: 26  DVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRQLDEVKAQLTQITLWRSAVNDAQATLE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  D E  D    E  +  K++R+  +      L     D +  +L I AG GG++A  
Sbjct: 86  LY--DLEPDDEMLSEAQSGLKQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A      V V   S+ ++ G K     I GR  +  ++ E G HR+ R
Sbjct: 144 WAQMLLRMYTRWAEDHDMTVTVDELSEGEEAGIKSATVEIEGRYAYGYLRNEKGTHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS A V ++P+  +  ++DIP +D+ + T R+ G+GGQ+VN  ++AVRI
Sbjct: 204 ISPFNANGKRQTSFAGVEIMPKIDQEVELDIPEKDLEVTTSRSGGAGGQNVNKVETAVRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTG+ V  + E+SQ QN+ +A+ +L+A+L  + +++ A E +  R   I       +
Sbjct: 264 LHIPTGLAVRCTQERSQLQNKEKALALLKAKLMVIAQEQRAAEIADIR-GDIVEAAWGNQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y F   + + D R       ++ V+ G +D  I  LL  
Sbjct: 323 IRNYVFHPYQMVKDLRTAEETTDVQAVMNGDLDRFIQTLLRQ 364


>gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus']
 gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus']
          Length = 346

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 181/349 (51%), Gaps = 14/349 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEE 59
            +   +  +L++  A IE  M++S   D        ++    +   +  IS  ++K  E 
Sbjct: 1   MIYFDK-DELESEKAAIEKEMAQSGFWDDKENARHKSQRLDKLKKRLKVISELEEKFDEI 59

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +    +  +        +  + E+     ++ +  + +   L   +  DD + IL I  G
Sbjct: 60  EIYQQLAAEEG------ENLREELEQSFSQLEKKLDNLELKLRLNEPYDDHNAILSIHPG 113

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            GG+E+  +   L RMY R+A    +++E L  S  D+ G K +   ISG   F  +K E
Sbjct: 114 AGGTESQDWAEMLLRMYRRWAESSGYQLETLEFSAGDEAGVKSVTLLISGDYAFGYLKGE 173

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVN 238
            GVHR+ R+   ++SGR HTS A+V VLPE  +  +VDI   D+RI+T RASG+GGQHVN
Sbjct: 174 RGVHRLVRISPFDSSGRRHTSFASVDVLPELDDELEVDIDENDLRIETYRASGAGGQHVN 233

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            TDSAVRITH PTG++V   S++SQH+N+  AMK+L ++L +++ +  A +    R  + 
Sbjct: 234 KTDSAVRITHQPTGVVVQCQSQRSQHKNKNVAMKILSSKLLELKEEAQAEKIEDLR-GEH 292

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
                  +IR+Y       I DHR +     ++ VL GY+D+ I   L 
Sbjct: 293 KEIAWGSQIRSYVLHPYNMIKDHRTDFEEGNVDKVLDGYLDEFIEEYLK 341


>gi|224534879|ref|ZP_03675448.1| peptide chain release factor 2 [Borrelia spielmanii A14S]
 gi|224513819|gb|EEF84144.1| peptide chain release factor 2 [Borrelia spielmanii A14S]
          Length = 350

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 177/342 (51%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   K  +   A   + +K+  + +   + +DL  +    
Sbjct: 14  KEIQAKIEKYEKEINQKNFWNDPKKAQKVIKAQRILKNKVDPWVELINKIKDLDDLCEII 73

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +I  L     +  ++    L          K+  D     L I +G GG+EA  +V
Sbjct: 74  ENEKDINSLEIEFNVLEKQYKDLLTI-----SYFKEELDANGAFLTIHSGAGGTEACDWV 128

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 129 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 187

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 188 PFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 247

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +
Sbjct: 248 IETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGN---Q 304

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 305 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 346


>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
           TK-6]
 gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
           TK-6]
 gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
          Length = 369

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 180/351 (51%), Gaps = 11/351 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  +K    +I++ MS +   +   K  E       +   I  +++ K       T+  
Sbjct: 24  DISSMKEELKKIDMSMSSTNFWEDQGKAKEITQRRKWLEETIKEFERIKSTL---ETLQE 80

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                 E        +    + + +   ++       +  D  +  L ++AG GG+EA  
Sbjct: 81  LLEEVDEEDLETLSMIAEEIQSVEKPIRDLEIKTFLSEEMDKNNAYLTVQAGAGGTEACD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    ++VEV+  + +D  G K     I G   +  +K ESGVHR+ R
Sbjct: 141 WASMLLRMYRRWAEKHGYEVEVIDINPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ R HTS A+V+V+P+  E  +++I  EDI+++T RASG+GGQ+VN TD+AVRI
Sbjct: 201 ISPFDANARRHTSFASVSVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRS 303
            HIPTGI V    E+SQ QNRL+A+++L+A+LY +E +++  ++ A    K  IG G   
Sbjct: 261 RHIPTGITVSCQQERSQFQNRLKALELLKAKLYQLELQKLEEKKKALEGEKTDIGWG--- 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
            +IR+Y F   + + D R  L +  ++ V+ G ID  I   L     + + 
Sbjct: 318 YQIRSYVFQPYQMVKDLRTGLEVGNVDAVMDGDIDSFIEEYLRWKAKEKVK 368


>gi|226953405|ref|ZP_03823869.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244]
 gi|294651888|ref|ZP_06729178.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC
           19194]
 gi|226835836|gb|EEH68219.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244]
 gi|292822211|gb|EFF81124.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 297

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 9/299 (3%)

Query: 52  YDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKS 111
           +D+  ++  D   ++       +  +   ++V A      +    + +  +  +  D   
Sbjct: 2   FDRLAEQLDDAKAMLDLAVEADD--ESLLLDVQAELDSAEQALGNLEFRRMFSNPMDPNP 59

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
           C LEI++G+GG+EA  +   L RMY R+     +K E++  SD D  G K     + G  
Sbjct: 60  CFLEIQSGSGGTEAQDWASMLLRMYLRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEF 119

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRAS 230
            +  ++ ESGVHR+ R    +++   HTS + V + PE  +  ++DI   D+R DT RAS
Sbjct: 120 AYGWLRTESGVHRLVRKSPFDSNNNRHTSFSAVFISPEIDDNIEIDINPSDVRTDTYRAS 179

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQH+N TDSAVR+TH PTGI+V   +++SQH NR  A K LRA+LY++E  +     
Sbjct: 180 GAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAA 239

Query: 290 S--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L  
Sbjct: 240 QALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTKAVLDGDLDKFIEASLKQ 295


>gi|309809397|ref|ZP_07703259.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|312870788|ref|ZP_07730894.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
 gi|312873174|ref|ZP_07733233.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|315653886|ref|ZP_07906802.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
 gi|308170308|gb|EFO72339.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|311091407|gb|EFQ49792.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093664|gb|EFQ52002.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
 gi|315488582|gb|EFU78228.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
          Length = 359

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 6/340 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +LK   A  E +M++    +      +   A + +  K+  Y        D  T +  +
Sbjct: 15  DNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSSALADAKTAVELY 74

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           N + E   L +I     + +    + E++ LL  K  D   + +LEI +G GG+EA  + 
Sbjct: 75  NMEPENDMLMEITAEVEKLKNEFNDYELHLLLSGKYDDH--NALLEIHSGAGGTEAMDWA 132

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             LFRMY+R+        EV      D+ G K +   + G   F  +K E+GVHR+ R+ 
Sbjct: 133 NMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRIS 192

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS A+V V+PE  +  +++I  +D+RID  R+SG+GGQH+N T SAVRITH
Sbjct: 193 PFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITH 252

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+  + +++SQ QNR  AM +LRA+L+ +E  +   +  A +  Q    +   +IR
Sbjct: 253 LPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQ-KEINFGSQIR 311

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y F     + DHR +        V+ G +D  I   L  
Sbjct: 312 SYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|254469263|ref|ZP_05082668.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
 gi|211961098|gb|EEA96293.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
          Length = 322

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 110/317 (34%), Positives = 166/317 (52%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +   +Q   + Q+L  + G+   D  + D A+  + A+ +++ +L  
Sbjct: 1   MRERQQLDDSINGVRKLEQDLVDNQELIEM-GEMEDDQSVVDEAEGALKAMLEQVNKL-- 57

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     +EI +G GG+E+  +   L RMY R+     +KVE++  +D 
Sbjct: 58  --QLQSLLSGEADGNDTYIEINSGAGGTESQDWASMLLRMYRRWGEQHGYKVELMEYNDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  MK E+GVHR+ R+   +++ R HTS A+V V P     I+
Sbjct: 116 EEAGIKSATLLVKGENAYGWMKTEAGVHRLVRISPYDSNARRHTSFASVWVYPVIDDSIN 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I   D RIDT RASG+GGQHVNTTDSAVRITH PTGI+V   SE+SQH+NR  A  +L
Sbjct: 176 IEINEADCRIDTYRASGAGGQHVNTTDSAVRITHNPTGIVVQCQSERSQHKNRATAWDML 235

Query: 274 RARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E +R   +  + A  K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEAELQRREEQANKDAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTAPSD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGDLDKFMEATLAHR 309


>gi|210615399|ref|ZP_03290526.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
 gi|210150248|gb|EEA81257.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
          Length = 313

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 168/318 (52%), Gaps = 9/318 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   + K+S      ++   L  +  D N +S + ++        +        
Sbjct: 1   MKELKSLKDFLEKVSQLTTSYEDIGVLIEMAYDENDESLLPEIESELTAFQQGYEE---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            I    L     D  + I+ + AG GG+E+  +   L+RMY R+A  + + VEVL   D 
Sbjct: 57  -IRIQTLLSGEYDKDNAIVTLHAGAGGTESCDWANMLYRMYTRWAERKGFSVEVLDFLDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           D  G K +   ++G   +  +K E GVHR+ R+    A+G+  TS A+  V+P+  +  D
Sbjct: 116 DVAGLKAVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDDID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +++  +D++IDT RASG+GGQHVN T SA+RITHIPTGI+V   +E+SQH N+ +AM++L
Sbjct: 176 IELNDDDLKIDTYRASGAGGQHVNKTSSAIRITHIPTGIVVQCQNERSQHNNKEKAMQML 235

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVL 332
           +A+LY ++ +  A + S  R  +I       +IR+Y       + DHR N+    +  VL
Sbjct: 236 KAKLYLLKEQEQAEKVSDIR-GEIKEIGFGNQIRSYVMQPYTLVKDHRTNVESGNVSSVL 294

Query: 333 QGYIDDIINPLLTAHQAK 350
            G ID  +N  L A   +
Sbjct: 295 DGNIDLFMNAYLKAQSME 312


>gi|114052118|ref|NP_001040455.1| mitochondrial translational release factor 1 [Bombyx mori]
 gi|95102962|gb|ABF51422.1| mitochondrial translational release factor 1 [Bombyx mori]
          Length = 401

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 128/344 (37%), Positives = 200/344 (58%), Gaps = 8/344 (2%)

Query: 18  EIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRD 77
           E E  +S+   +    +       I PI++ +          + L  +      DSEI+ 
Sbjct: 48  EHENLLSK---MKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKK 104

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
           + + E     K ++E+++++  L+L +    +   +LE+ AG GG EA LF  +LF MY+
Sbjct: 105 MIKEEAAIYLKRLKEIDDDLQ-LILLEPPLTEGGVLLELTAGAGGQEAMLFAKELFNMYQ 163

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
            YA  + W+V++ S    + GG ++    I G GV   M+ E+GVHRVQR+PATE  GR+
Sbjct: 164 SYAINKGWEVDIASFDLTEIGGVRKGSMLIQGFGVPELMRMEAGVHRVQRIPATEKGGRI 223

Query: 198 HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           HTS  TVA+LP+ +EI+++IP  D+ I+T RASG+GGQHVNTTDSAVR+ H PTG  V  
Sbjct: 224 HTSTVTVAILPQPSEIELNIPERDVVIETKRASGAGGQHVNTTDSAVRLIHTPTGTTVEC 283

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRI 316
              +SQ +N+  AM+ LR  L + + +  A +  + RK Q+GSG+R+E+IRTYNF Q R+
Sbjct: 284 QEGRSQIKNKQIAMQKLRTLLLEKQIQEQALKLQSERKSQVGSGNRNEKIRTYNFPQDRV 343

Query: 317 TDHRI-NLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSASE 357
           T+HR    T + L+  ++G   ++ +   LL   + K++    E
Sbjct: 344 TEHRDGGGTFHNLKGFMEGGEQLEQLQESLLKKERHKLLLEEIE 387


>gi|325287611|ref|YP_004263401.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
 gi|324323065|gb|ADY30530.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
          Length = 365

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 160/344 (46%), Gaps = 12/344 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I          E +       +       +   +      +  +D  K    DL  ++ 
Sbjct: 22  DIDAKLIEIENEEEKTLAPDFWNNAQVAQAQMKVLQSKKKWVKDFDDAKILIADLEVLLE 81

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                    +  +      +  I +LE    +  +  D  D+ + IL+I AG GG+E+  
Sbjct: 82  FLKEGDVTAEEVENHYNKAKTHIEDLE----FKNMLSDEGDELTAILQITAGAGGTESCD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY  +A    +K++ L+  + D  G K +   I G   F  +K E+GVHR+ R
Sbjct: 138 WAAMLMRMYLMWAEKNGYKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLKGENGVHRLVR 197

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ + HTS A+V V P     I+++I   DI I T R+SG+GGQ+VN  ++ V++
Sbjct: 198 ISPFDSNAKRHTSFASVYVYPLADDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQL 257

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           TH PTGI +  S  +SQH NR  AMK+L+++LY++E ++    RS     K++I  G   
Sbjct: 258 THKPTGIQISCSDSRSQHDNRATAMKMLKSQLYEIELRKKQEARSEIEAGKMKIEWG--- 314

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +IR Y     + + D R       ++ V+ G ID  +   L  
Sbjct: 315 SQIRNYVMHPYKLVKDVRTAEETGNVDAVMDGQIDPFLKAYLMM 358


>gi|264679119|ref|YP_003279026.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
 gi|262209632|gb|ACY33730.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
          Length = 299

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 98/303 (32%), Positives = 157/303 (51%), Gaps = 12/303 (3%)

Query: 48  KISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
            +     +  +  +L  +  +   D+ +  +      A   +++ L  E+ +  +     
Sbjct: 3   TLEKLTTELADNSELFEMSKEEGDDAGLETIE-----AETAKLKPLIEELEFRRMFGGEA 57

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D  +C ++I+AG GG+EA  +   L R Y +YA  + +K  V   +  D  G K     +
Sbjct: 58  DPLNCFIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKV 117

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDT 226
            G   +  ++ E+GVHR+ R    ++SG  HTS +++ V PE  +  +++I   D+R DT
Sbjct: 118 EGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDT 177

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            RASG+GGQH+N TDSAVR+THIPTGI+V     +SQH NR  A + LR+RLYD E ++ 
Sbjct: 178 YRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKR 237

Query: 286 ANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPL 343
             E+    + K  +G G    +IR+Y     RI D R N+ +   + VL G +D  I   
Sbjct: 238 MEEQQKLEDTKTDVGWG---HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEAS 294

Query: 344 LTA 346
           L  
Sbjct: 295 LKQ 297


>gi|259501054|ref|ZP_05743956.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335]
 gi|309807259|ref|ZP_07701230.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b]
 gi|309808840|ref|ZP_07702723.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a]
 gi|312874339|ref|ZP_07734370.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d]
 gi|312875084|ref|ZP_07735101.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b]
 gi|325911468|ref|ZP_08173880.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D]
 gi|259167748|gb|EEW52243.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335]
 gi|308166350|gb|EFO68558.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b]
 gi|308167916|gb|EFO70051.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a]
 gi|311089374|gb|EFQ47801.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b]
 gi|311090105|gb|EFQ48518.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d]
 gi|325476818|gb|EGC79972.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D]
          Length = 359

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 6/340 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +LK   A  E +M++    +      +   A + +  K+  Y        D  T +  +
Sbjct: 15  DNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSSALADAKTAVELY 74

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           N + E   L +I     + +     N     LL     DD + +LEI +G GG+EA  + 
Sbjct: 75  NMEPENDMLMEITAEVEKLKNEF--NNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWA 132

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             LFRMY+R+        EV      D+ G K +   + G   F  +K E+GVHR+ R+ 
Sbjct: 133 NMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRIS 192

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS A+V V+PE  +  +++I  +D+RID  R+SG+GGQH+N T SAVRITH
Sbjct: 193 PFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITH 252

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+  + +++SQ QNR  AM +LRA+L+ +E  +   +  A +  Q    +   +IR
Sbjct: 253 LPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQ-KEINFGSQIR 311

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y F     + DHR +        V+ G +D  I   L  
Sbjct: 312 SYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|187932243|ref|YP_001892228.1| peptide chain release factor 2 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187713152|gb|ACD31449.1| peptide chain release factor 2 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 325

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 107/331 (32%), Positives = 172/331 (51%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +   +L  +  +   D  +   
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKE---DESLMQE 58

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              +   +  EI +LE    +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 59  IAKDTQNVASEIEKLE----FRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RI D R  +     + VL G +D  I   L 
Sbjct: 292 RIKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|332241803|ref|XP_003270069.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 1
           [Nomascus leucogenys]
 gi|332241805|ref|XP_003270070.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 445

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 132/363 (36%), Positives = 210/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I+++I  L NE+   L+PK+  D    ILE+ AG  T
Sbjct: 136 MCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 196 GGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 255

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 256 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLNPKDLRIDTFRAKGAGGQHV 315

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 316 NTTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDRRQQQSARKLQ 375

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R++DHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 376 VGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIVE 435

Query: 355 ASE 357
             +
Sbjct: 436 LLD 438


>gi|315127590|ref|YP_004069593.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913]
 gi|315016104|gb|ADT69442.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913]
          Length = 300

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I        + + L  +  +   D +  D AQ E+  + +++  LE    +  +   
Sbjct: 2   VETIDNLVAGTDDVEGLVELAVEAE-DQDTFDEAQSELADLNQQLEGLE----FRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
           + D     L++++G+GG+EA  +   L RMY R+   + +KVE++ ++D D  G K    
Sbjct: 57  SHDSNDAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIKGATV 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
             SG   +  ++ E+GVHR+ R    ++SGR HTS A+  V PE    I++DI   D+RI
Sbjct: 117 RFSGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDINPSDLRI 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVNTT+SAVRITH+PT  +V   +E+SQH+N+ +AMK L+A+L+++E +
Sbjct: 177 DVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQ 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 237 QQNAEKQSQEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIE 293

Query: 342 PLLT 345
             L 
Sbjct: 294 ASLK 297


>gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 325

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 106/329 (32%), Positives = 175/329 (53%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    +      ++T+E   I   I ++     K  + + L  ++ D + +S    + 
Sbjct: 1   MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEMMDDDDEESAYEIIN 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
            I+ +  E +   +E      +L     D  + IL +  G GG++A  +   L RMY R+
Sbjct: 61  NIKEIEEEIDNYNME------ILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVEV+   + D+ G K +   + G   +  +K E G+HR+ R+    A+G+  T
Sbjct: 115 CEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   E D+DI  EDI++DT RASG+GGQH+N TDSAVRITHIPTG++V   
Sbjct: 175 SFASMEVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ  N+  AM +L+A+L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQFSNKDTAMGMLKAKLIELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR N+ +  +  V+ G +D  IN  L 
Sbjct: 294 KDHRTNVEVSNVTAVMDGDLDLFINSYLK 322


>gi|238792836|ref|ZP_04636467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909]
 gi|238727944|gb|EEQ19467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909]
          Length = 289

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 99/294 (33%), Positives = 159/294 (54%), Gaps = 12/294 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++   L  +  + + +    +      +A    +     ++ +  +     D  +C L++
Sbjct: 2   EDVSGLLELAIEADDEETFNEA-----IAELDILDGKLGQLEFRRMFSGEYDSANCYLDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K     I G   F  +
Sbjct: 57  QAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVN T+SAVRITH+PT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    +
Sbjct: 177 HVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 NKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|296394151|ref|YP_003659035.1| peptide subunit release factor 2 [Segniliparus rotundus DSM 44985]
 gi|296181298|gb|ADG98204.1| peptide chain release factor 2 [Segniliparus rotundus DSM 44985]
          Length = 372

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 164/346 (47%), Gaps = 6/346 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A++E + ++    +   +  E  + ++   + +      +    DLH +  
Sbjct: 24  DLDKLRAEIADLETQAADPSLWEDQERGQEVTSGLARKQATLRAVTGLRSRLDDLHVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEI-NYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               +   +    +E    E++    E E      L     D++  ++ IR+G GG +AA
Sbjct: 84  LAEDEEGAQGQEALEEADTERKTLRAEIESLEVRTLLNGEYDEREALVTIRSGAGGIDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   K  VEV   S  ++ G K     +     +  +  E G HR+ 
Sbjct: 144 DWAQMLMRMYIRWAERHKHPVEVYDISYAEEAGIKSATFAVKSAYAYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V VLP       +D+P  +IR+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQGRRQTSFADVEVLPVVGTTDHIDVPEAEIRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH+PTGI+V   +EKSQ QN+L AM+VL+A+L +  R     + +A  K   G+     
Sbjct: 264 ITHLPTGIVVTCQNEKSQLQNKLSAMRVLQAKLLERRRHEEQEQLNAL-KGDGGT-SWGT 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           ++R+Y  +  + + D R          VL G ID  +   +   ++
Sbjct: 322 QMRSYVLAPYQMVKDLRTEYEESNPGAVLDGAIDGFLESGIRWRRS 367


>gi|118590063|ref|ZP_01547467.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
 gi|118437560|gb|EAV44197.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
          Length = 322

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 113/317 (35%), Positives = 160/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   IS I   +Q   +  +L  +    +  S + D  +       + ++   N
Sbjct: 1   MRERQQLDDSISGIKSLEQDLSDNIELIELGEMEDDKSVVADAEEA-----LRGLKGKVN 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
           ++    L     D     LEI +G GG+E+  +   L RMY R+A    +KVEVL   D 
Sbjct: 56  QLQLNSLLSGEADANDTYLEINSGAGGTESQDWASMLLRMYRRWAEKHGFKVEVLEYHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   +++ R HTS ++  V P     ID
Sbjct: 116 EEAGIKSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +DI   D RIDT RASG+GGQHVNTTDSAVRITH PTGI+V   SE+SQH+NR  A  +L
Sbjct: 176 IDINESDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +ARLY+ E K+   A    A  K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 KARLYEAELKKREEAASAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTSPGD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMEAALAQR 309


>gi|13470493|ref|NP_102062.1| peptide chain release factor 2 [Mesorhizobium loti MAFF303099]
 gi|14021235|dbj|BAB47848.1| translation releasing factor RF-2 [Mesorhizobium loti MAFF303099]
          Length = 340

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 112/334 (33%), Positives = 165/334 (49%), Gaps = 16/334 (4%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           R  ++   +      KL  E   +   I+ +    Q  ++   L  +  +   +  I + 
Sbjct: 2   RAEDASLWNEPLEAQKLMRERQGLEEGIAAVKGLTQALEDNIGLIELGEEEGDEGVITEA 61

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
                    +             L     D     LEI AG GG+E+  +   L RMY R
Sbjct: 62  EAAIRSMQGEAKA-----RQVETLLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTR 116

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A  R++KVEVL   D ++ G K     I G   +  +K ESGVHR+ R+   +++ R H
Sbjct: 117 WAERRRFKVEVLEVHDGEEAGIKSATLMIKGHNAYGWLKTESGVHRLVRISPYDSNARRH 176

Query: 199 TSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVT 256
           TS A+V V P     I++D+   D+RIDT R+SGSGGQHVNTTDSAVRITHI TGI +  
Sbjct: 177 TSFASVWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVAC 236

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG 314
            +E+SQH+NR +A ++LR+RLY+ E K+     +A    K  IG G    +IR+Y     
Sbjct: 237 QAERSQHKNRAKAWEMLRSRLYEEELKKREAIANATEASKSDIGWG---HQIRSYVLQPY 293

Query: 315 R-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           + + D R  +       VL G +DD +   L+  
Sbjct: 294 QLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQR 327


>gi|300741817|ref|ZP_07071838.1| peptide chain release factor 2 [Rothia dentocariosa M567]
 gi|300381002|gb|EFJ77564.1| peptide chain release factor 2 [Rothia dentocariosa M567]
          Length = 375

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 6/348 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  +K    ++  + S     D         +A+S   ++++          D+  ++ 
Sbjct: 25  DLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNLASRIDDVEVMVE 84

Query: 68  DHN-SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D   ++    E  A  KE+R+  +E+  L+L     D +  ++ IR+G GG +AA
Sbjct: 85  LAQTEDESSKEDLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVVTIRSGAGGVDAA 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            F   L RMY R+A    +  +VL +S  ++ G K +   ++    F R+  E+G HR+ 
Sbjct: 145 DFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V V+P   + D  +IP  +I++D  R+SG GGQ VNTTDSAVR
Sbjct: 205 RISPFDNQGRRQTSFAAVEVIPLIEQTDALEIPESEIKVDVFRSSGPGGQSVNTTDSAVR 264

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V+  +EKSQ QNR  A++VL++RL  + +++   ++         S    +
Sbjct: 265 MTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLMLRQEQEDAKKKELAGDIKAS--WGD 322

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           ++R+Y     + + D R          VL G ++  I   +    +  
Sbjct: 323 QMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRWRASGR 370


>gi|304322131|ref|YP_003855774.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
           HTCC2503]
 gi|303301033|gb|ADM10632.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
           HTCC2503]
          Length = 315

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 160/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +   I+ ++    +  +  +L  +      D+ + D+        ++       
Sbjct: 1   MQERTHLENQIAALTAMQTELDDNLELAEMAEAEGDDAAVDDIQAALADLKDRA-----G 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D  +  +EI AG GG+E+  +   L+RMY R+A     KV+++     
Sbjct: 56  RAELEALLSGEADANNAFVEIHAGAGGTESNDWANMLYRMYVRWAQQHGHKVDIIEEQGG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS ++V V PE  +  +
Sbjct: 116 EEAGIKSATILVKGINAYGWLKVESGVHRLVRISPYDSNARRHTSFSSVWVYPEIDDNIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +++   D R+DT RASG+GGQHVNTTDSAVRITH PTGI+V   SE+SQH+NR  A  +L
Sbjct: 176 IEVAESDCRVDTFRASGAGGQHVNTTDSAVRITHEPTGIVVQCQSERSQHKNRATAWNML 235

Query: 274 RARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E +R   E    A  K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEMELQRREEEANAQAASKTDIGWG---HQIRSYVLQPYQMVKDLRTGVESPSPDA 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGDLDAFMGAALAQR 309


>gi|3328106|gb|AAD12759.1| translational release factor 1 [Homo sapiens]
          Length = 445

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 132/363 (36%), Positives = 208/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEESRRSLNRRHAELAPLAAIYQETQETEQAIEELGS 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++ +LA  E   I+++I  L NE+   L+PK+  D    ILE+ AG  T
Sbjct: 136 MCKSLNKRDEKQLLELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E L+ +  D GG     A ISG GV+  +K+E 
Sbjct: 196 GGDICQQFTREIFDMYQNYSCYKHWQFEPLNYTPADYGGLHHAAARISGDGVYKHLKYEG 255

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 256 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHV 315

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 316 NKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQ 375

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R++DHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 376 VGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAE 435

Query: 355 ASE 357
             +
Sbjct: 436 LLD 438


>gi|258541170|ref|YP_003186603.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256632248|dbj|BAH98223.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256635305|dbj|BAI01274.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256638360|dbj|BAI04322.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256641414|dbj|BAI07369.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256644469|dbj|BAI10417.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256647524|dbj|BAI13465.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256650577|dbj|BAI16511.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256653568|dbj|BAI19495.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 323

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 102/318 (32%), Positives = 166/318 (52%), Gaps = 13/318 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E   ++  I  +   +   ++  +L  +  +   D+++       +  + +E +  E
Sbjct: 1   MMRERTLLANQIEGVEALETNVRDTSELIELA-EAEGDADLVAEGMATLRDLAEEAKRRE 59

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                  L     D   C LE+ AG GG+EA  +   L RMY R+A    +KV ++ SS+
Sbjct: 60  T----ESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLMESSE 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            +  G K     +SG   +  +K E+GVHR+ R+   +A+ R  TS A+V V P     I
Sbjct: 116 GEQAGLKSATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +++I   D+++DT RASG+GGQHVN TDSA+RITH+PTGI+V   +++SQH+NR  AM++
Sbjct: 176 EIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQM 235

Query: 273 LRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           LRARLY+ E ++       +   K  IG G    +IR+Y  +  + + D R  +     +
Sbjct: 236 LRARLYEAELQKREAEAAAAEAAKTDIGWG---HQIRSYVLAPYQMVKDLRTGVETGNPD 292

Query: 330 YVLQGYIDDIINPLLTAH 347
            VL G +D  +   L   
Sbjct: 293 AVLDGDLDAFMAAALAMR 310


>gi|270132345|ref|NP_666072.3| peptide chain release factor 1, mitochondrial precursor [Mus
           musculus]
 gi|27151667|sp|Q8K126|RF1M_MOUSE RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|20810364|gb|AAH28898.1| Mitochondrial translational release factor 1 [Mus musculus]
 gi|26336078|dbj|BAC31724.1| unnamed protein product [Mus musculus]
 gi|148703819|gb|EDL35766.1| mitochondrial translational release factor 1, isoform CRA_a [Mus
           musculus]
          Length = 446

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 130/360 (36%), Positives = 208/360 (57%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +   S +      L   +A ++P+ +      + +Q  ++L +
Sbjct: 77  QKYMEDLNKEYQTLDQCLQGISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELES 136

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++L   E   I+++I  L +E+   L+PK+  D    ILE+ +G  T
Sbjct: 137 LCKSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTT 196

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + WK E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 197 GGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 256

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+R+DT RA G+GGQHV
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHV 316

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A++VLRARLY    ++   ++   RKLQ
Sbjct: 317 NTTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNARKLQ 376

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI   +  ++  L+G   +D +I  LL +   + I  
Sbjct: 377 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLLQSADEEAISE 436


>gi|309803856|ref|ZP_07697941.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d]
 gi|325913296|ref|ZP_08175664.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B]
 gi|329920534|ref|ZP_08277266.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G]
 gi|308164090|gb|EFO66352.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d]
 gi|325477399|gb|EGC80543.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B]
 gi|328936210|gb|EGG32663.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G]
          Length = 359

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 6/340 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +LK   A  E +M++    +      +   A + +  K+  Y        D  T +  +
Sbjct: 15  DNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSSALADAKTAVELY 74

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           N + E   L +I     + +     N     LL     DD + +LEI +G GG+EA  + 
Sbjct: 75  NMEPENDMLMEITAEVEKLKNEF--NNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWA 132

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             LFRMY+R+        EV      D+ G K +   + G   F  +K E+GVHR+ R+ 
Sbjct: 133 NMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRIS 192

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS A+V V+PE  +  +++I  +D+RID  R+SG+GGQH+N T SAVRITH
Sbjct: 193 PFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITH 252

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+  + +++SQ QNR  AM +LRA+L+ +E  +   +  A +  Q    +   +IR
Sbjct: 253 LPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQ-KEINFGSQIR 311

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y F     + DHR +        V+ G +D  I   L  
Sbjct: 312 SYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|167755601|ref|ZP_02427728.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
 gi|237734350|ref|ZP_04564831.1| peptide chain release factor 2 [Mollicutes bacterium D7]
 gi|167704540|gb|EDS19119.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
 gi|229382580|gb|EEO32671.1| peptide chain release factor 2 [Coprobacillus sp. D7]
          Length = 365

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 168/344 (48%), Gaps = 12/344 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI---SPIISKISIYDQKKQEEQDLHT 64
            I   +     + +   +    D   K    Y  +        +  + +       + + 
Sbjct: 25  DIEAYRREIEGLTVITLQEGFWDDANKAKVTYDKLNKMKKTTDQYDLLETTLTSLDETYE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +              + +      +  ++   ++L     DD + I+EI  G GG+E
Sbjct: 85  LVKNTEDQEFKE-----ILESDYTVFEKELSKFETMMLLSGEHDDLNAIVEIHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   LFRMY+RYAA + WKVEVL   D D  G K +   I G  V+  +K E GVHR
Sbjct: 140 SQDWAEMLFRMYQRYAANKGWKVEVLDYLDGDVAGIKSVTMLIKGDNVYGHLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS A+V V+PE     +++I   D++IDT RASG+GGQH+N TDSA
Sbjct: 200 LVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIEIQSTDLKIDTYRASGAGGQHINKTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PT I+V   S++SQ QNR +AM +L+++LY +  ++ A+E    +  Q      
Sbjct: 260 VRITHLPTNIVVTCQSQRSQIQNREQAMVMLKSKLYQLMLEKQASELKELKGEQ-KEIAW 318

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y       + D+R        + VL G +D  I   L 
Sbjct: 319 GSQIRSYVLHPYSLVKDNRSGYESNNPKAVLDGDLDGFIYAYLK 362


>gi|89890713|ref|ZP_01202222.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium
           BBFL7]
 gi|89516858|gb|EAS19516.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium
           BBFL7]
          Length = 386

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 90/349 (25%), Positives = 157/349 (44%), Gaps = 12/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           QI   +     +E +       +           +       + Y       +D   +  
Sbjct: 40  QIEAKEIEITNLEEKTFSPDFWNDAKAAELIMKELRNKKQWTTDYATATTLAEDTEVLYE 99

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                    D    +  A      +LE    +  +  +  DD S +L+I AG GG+E+  
Sbjct: 100 FFKEGDASEDEVMAKYNAAVDITEKLE----FKNMLSNEGDDMSAVLQITAGAGGTESCD 155

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY  +A    +KV+ L+    D  G K +   I G   F  +K E+GVHR+ R
Sbjct: 156 WAEMLMRMYMMWAQKNNYKVKELNFQAGDVAGIKTVTLEIEGDYSFGWLKGENGVHRLVR 215

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ + HTS A+V V P     I++DI   DI+ D  R+SG+GGQ+VN  ++   +
Sbjct: 216 ISPFDSNAKRHTSFASVYVYPLADDTIEIDINPADIKWDFARSSGAGGQNVNKVETKAIL 275

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
           TH P+GI++  S  +SQ +NR +AM++L+++L+++E ++    R      K++I  G   
Sbjct: 276 THHPSGIVIHNSETRSQLENREKAMQMLKSQLFEIELQKRNAARDEIESGKMKIEWG--- 332

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR Y     + + D R       ++ V+ G ID  +   L     + 
Sbjct: 333 SQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGDIDAFLKAFLMESGQEK 381


>gi|332381658|gb|AEE66505.1| peptide chain release factor 2 [Bordetella pertussis CS]
          Length = 293

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 103/295 (34%), Positives = 164/295 (55%), Gaps = 12/295 (4%)

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
             +  +L  +    +SD    +  + +    ++++  LE    +  +  +  D  +C ++
Sbjct: 5   LADSCELVELA-LADSDDATLEAIEHDADRFQEKLETLE----FRRMFANPADPLNCFVD 59

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           I+AG GG+EA  +   L R Y +YA  + +K E+L  S+ D  G K     I G   F  
Sbjct: 60  IQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGY 119

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGG 234
           ++ E+GVHR+ R    ++SG  HTS A+V V PE     +V++   D+RIDT RASG+GG
Sbjct: 120 LRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGG 179

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--A 291
           QH+N TDSAVRITH P+GI+V   +++SQH+NR  AM++L+++LY++E +    E+    
Sbjct: 180 QHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLE 239

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + K  +G G    +IR+Y   Q RI D R N+ +   + VL G +D  I   L  
Sbjct: 240 DSKTDVGWG---HQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 291


>gi|261345593|ref|ZP_05973237.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541]
 gi|282566073|gb|EFB71608.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541]
          Length = 299

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 102/305 (33%), Positives = 168/305 (55%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I   +Q  ++ + L  +  +   D E  +    E+  ++ ++ +LE    +  +   
Sbjct: 1   MDTIDQLEQGIEDVEGLLELAIEA-DDEETFNETDAELEQLQGKLEQLE----FRRMFSG 55

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K    
Sbjct: 56  EYDSANCYIDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATI 115

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
            I G   +  ++ E+GVHR+ R    ++ GR HTS ++  + PE   +ID++I   D+RI
Sbjct: 116 KIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRI 175

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AM+ L+A+LY++E +
Sbjct: 176 DVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEIQ 235

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   ++      K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 236 KKNADKQAMEENKSDIGWG---SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDKFIE 292

Query: 342 PLLTA 346
             L A
Sbjct: 293 ASLKA 297


>gi|194040714|ref|XP_001926694.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 1 [Sus scrofa]
 gi|311266318|ref|XP_003131053.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 2 [Sus scrofa]
          Length = 446

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 129/360 (35%), Positives = 206/360 (57%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +    + +     L   +A ++P+        + +Q  ++L +
Sbjct: 77  QKYMEDLSKEYQTLDRCLQHISAPEGDRRSLNRRHAELAPLAVIYKEIQEAEQAIEELES 136

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I ++I  L +E+   L+PK+  D    ILE+ +G  T
Sbjct: 137 MCKSLNKQDEKQLQELALEEKRTIAQKINMLYHELFQSLVPKEKYDKNDVILEVTSGRTT 196

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y++ + W  E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 197 GGDICQQFTREIFDMYQNYSSYKHWTFELLNYTPADYGGLHHAAARISGANVYKHLKYEG 256

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHV 316

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ H+PTG++V    E+SQ +N+  A++VLRARLY    ++   ++ + RKLQ
Sbjct: 317 NTTDSAVRLVHVPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKEKCQQQSARKLQ 376

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI   +  ++  L G   +D +I  LL     + I  
Sbjct: 377 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRNIKEFLCGEKCLDLLIQRLLQTADEEAITE 436


>gi|126697716|ref|YP_001086613.1| peptide chain release factor 2 [Clostridium difficile 630]
 gi|115249153|emb|CAJ66964.1| Peptide chain release factor 2 (RF-2) [Clostridium difficile]
          Length = 328

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 108/334 (32%), Positives = 173/334 (51%), Gaps = 16/334 (4%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +      ++ +E  ++   + +        ++ + L  +  + + DS  RD+ 
Sbjct: 1   MNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      EK             L     D  + IL I AGTGG +A  +   L RMY R+
Sbjct: 61  KSIESMEEKLSEM-----KIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +  + +KV++L    + + G K     + G   +  +K E GVHR+ R+   + SG+ HT
Sbjct: 116 SESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ V PE    I+V+I   D++IDT RASG+GGQHVNTTDSAVRITHIPTG++V   
Sbjct: 176 SFASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQGR 315
           +E+SQH N+ RAM++L A+L +++      +    +    QI  G    +IR+Y F   +
Sbjct: 236 NERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWG---SQIRSYVFQPYK 292

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            + DHR N     ++ V+ G ID  IN  L  ++
Sbjct: 293 LVKDHRTNAEFGNVDSVMNGNIDLFINEYLKMNK 326


>gi|256851470|ref|ZP_05556859.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260660891|ref|ZP_05861806.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN]
 gi|282933470|ref|ZP_06338846.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|297206285|ref|ZP_06923680.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16]
 gi|256616532|gb|EEU21720.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260548613|gb|EEX24588.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN]
 gi|281302401|gb|EFA94627.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|297149411|gb|EFH29709.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16]
          Length = 332

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 98/334 (29%), Positives = 163/334 (48%), Gaps = 12/334 (3%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +      KL  E   +       +   Q   +E+    ++ +   D    ++ 
Sbjct: 1   MADPDFWNNQESAQKLISETNKLKEKRDHFNDLAQAFSDEETALELLKEEPDDDLQVEVE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  +   +         LL     D  + ++EI  G GG+EA  +   L RMY+R+
Sbjct: 61  TDLEKLKDSFHQ-----YELNLLLSGKYDANNALMEIHPGAGGTEAMDWAQMLMRMYQRF 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +    +  E+      D+ G K +   I G   +  +K E GVHR+ R+   +A+ R HT
Sbjct: 116 SEAHGFTFEIDDYEPGDEAGVKSVSILIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTS 257
           S A+V V+PE  +  +VDI   D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + 
Sbjct: 176 SFASVEVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +++SQ QN+  AM  LRA+L+ +E ++   E+   + +Q        +IR+Y F     +
Sbjct: 236 AQRSQFQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQ-QDIAWGSQIRSYVFHPYSMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            DHR N     +  V+ G +D++I   L    ++
Sbjct: 295 KDHRTNFETSDVNGVMDGKLDNLIYSFLQWRLSQ 328


>gi|221066286|ref|ZP_03542391.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
 gi|220711309|gb|EED66677.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
          Length = 299

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 98/303 (32%), Positives = 157/303 (51%), Gaps = 12/303 (3%)

Query: 48  KISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
            +     +  +  +L  +  +   D+ +  +      A   +++ L  E+ +  +     
Sbjct: 3   TLEKLTTELADNVELFEMSKEEGDDAGLETIE-----AETAKLKPLIEELEFRRMFGGEA 57

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D  +C ++I+AG GG+EA  +   L R Y +YA  + +K  V   +  D  G K     +
Sbjct: 58  DPLNCFIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKV 117

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDT 226
            G   +  ++ E+GVHR+ R    ++SG  HTS +++ V PE  +  +++I   D+R DT
Sbjct: 118 EGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDT 177

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            RASG+GGQH+N TDSAVR+THIPTGI+V     +SQH NR  A + LR+RLYD E ++ 
Sbjct: 178 YRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKR 237

Query: 286 ANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPL 343
             E+    + K  +G G    +IR+Y     RI D R N+ +   + VL G +D  I   
Sbjct: 238 MEEQQKLEDTKTDVGWG---HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEAS 294

Query: 344 LTA 346
           L  
Sbjct: 295 LKQ 297


>gi|241888662|ref|ZP_04775969.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379]
 gi|241864685|gb|EER69060.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379]
          Length = 372

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 184/350 (52%), Gaps = 11/350 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I D   R AEIE  M E+   +     +        I  ++  + +     +    ++ 
Sbjct: 25  KIEDKTERVAEIENMMLEADFWNDSEAASLLVTESKSIKKELDEFSEMIDYLEHSEEMVE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               + +  +    ++L     ++    + ++ LL  +  D+ + ILEI AG GG++A  
Sbjct: 85  FLKDEDD--EEIYQDLLETVVNLKNSVEDFSFRLLFSEEYDNNTAILEIHAGAGGTDATD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   + RMYER+   +  K   L+    D  G K     I G   +  +K E GVHRV R
Sbjct: 143 WSELMLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKIEGDFAYGLLKGEKGVHRVVR 202

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           +   + SG+ HTS A++ V+PE  +   +++I  ED++IDT RA G+GGQH+NTTDSAVR
Sbjct: 203 ISPFDPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGGQHINTTDSAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDR 302
           ITH+PTGI+V + +E+SQ +N+  AMK L+++LY +E +    E +A R  Q  IG G  
Sbjct: 263 ITHLPTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKEKELAAIRGEQKDIGWG-- 320

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
             +IR+Y F+    + DHR N  +  ++ V+ G I D I+  L  +  + 
Sbjct: 321 -SQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYLHYNIKEK 369


>gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
           16047]
 gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
           16047]
          Length = 332

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 101/329 (30%), Positives = 166/329 (50%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    +   K  +     + +  K   + + ++  +D+ T +     + +     + E
Sbjct: 1   MAQPDFWNDQEKAQKLINDNNLLKEKRDSFLKLQKGYEDVSTALELLREEPDADLQKETE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 +     +     LL     D+ + +LEI  G GG+EA  +   L RMY+RY   
Sbjct: 61  NDLANLQEEF--HNYELDLLLSGKYDNHNALLEIHPGAGGTEAMDWGQMLLRMYQRYCDS 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +K E+      ++ G K + A I G+  +  +K E+GVHR+ R+   +A+ R HTS A
Sbjct: 119 AGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
           +V V+PE    I +DI  +D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ QNR  AM  LRA+L+ +E ++   ++ A +  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWG---SQIRSYVFHPYNLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R       +  V+ G +   I   L  
Sbjct: 296 DLRTGYETADVNGVMDGKLQPFIYSYLQW 324


>gi|115403013|ref|XP_001217583.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189429|gb|EAU31129.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 447

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 117/370 (31%), Positives = 194/370 (52%), Gaps = 28/370 (7%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L      +  ++ +S       K  +    ++ I   +  +D   +   +L +++ D +
Sbjct: 49  SLAAEHKSLSAKLEDSFD----AKTAKRIGELAAITKVLKEWDTANESIAELKSMLEDPD 104

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D E+R LA  ++ + +  +  L + +   L+P+    +  C+LEIR G GG EA LF  
Sbjct: 105 TDGELRSLAVEDLESSKNNLPVLSDSLKQALVPRHPFAELPCLLEIRPGAGGDEAGLFAF 164

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG---YKEIVATISGRGVFSRMKFESGVHRVQR 187
           +L RMY  + + R ++  V+     D  G     E +  +   G +  ++ ESGVHRVQR
Sbjct: 165 ELLRMYTAFCSRRGFRSSVIKLDVADGAGDDRLTEAILEVEANGAYDVLRTESGVHRVQR 224

Query: 188 VPATEASGRVHTSAATVAVLPEA---------------AEIDVDIPLEDIRIDTMRASGS 232
           VPATE+ GR HTSA +V VLP                    D  +  +++R + MRA G+
Sbjct: 225 VPATESKGRTHTSAVSVMVLPSFPDSGAGSDSALNVDDPNSDYYVDPQEVRSEKMRAGGA 284

Query: 233 GGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T+SA+R+THIPTGI+V+    +SQH NR +A ++LRARL +  ++    E   
Sbjct: 285 GGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQELVE 344

Query: 292 NRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTA 346
            R+  +G      R ++IRTYN+ Q R TDHR   T++ L+ VL G   ++ +++ + T 
Sbjct: 345 LRRGVMGGVARMGRGDKIRTYNYGQSRCTDHRSGTTIHNLDSVLDGGDGLETVMDSVRTW 404

Query: 347 HQAKMIGSAS 356
              + + + +
Sbjct: 405 LVDQEVAAMA 414


>gi|284929451|ref|YP_003421973.1| peptide chain release factor 2 [cyanobacterium UCYN-A]
 gi|284809895|gb|ADB95592.1| bacterial peptide chain release factor 2 (bRF-2) [cyanobacterium
           UCYN-A]
          Length = 344

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 94/338 (27%), Positives = 162/338 (47%), Gaps = 7/338 (2%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L+    ++E    +    D      +    +S   S++  Y Q   + +D   ++    
Sbjct: 3   ALQASIKDLENTTIQPNFWDNPETAQKISQELSNFKSQLDQYHQWYNKLEDTKIIMDLLI 62

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D++       E      ++++  +  +   L   T D K  IL I  G GG++A  +  
Sbjct: 63  LDND--KSLLEEAQNNITQLKKNLDNWDLQQLLSGTYDIKGAILNINTGVGGTDAQDWSE 120

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+   + +KV ++  S+ D+ G K       G   F  +K E G HR+ R+  
Sbjct: 121 MLLRMYRRWGESQGYKVNLVEISEGDEAGIKSATLEFEGCYAFGYLKGEKGTHRLVRISP 180

Query: 191 TEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             A+G+  TS   + V+P  E  +I V+IP +D+ I T R+ G GGQ+VN  ++AVRI H
Sbjct: 181 FNANGKRQTSFTGIEVMPKLEGNDIKVEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVH 240

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI V  + E+SQ QN+ +A+ +L+A+L  + +++ A + +  R   I       +IR
Sbjct: 241 LPTGISVRCTQERSQLQNKEKALILLKAKLLIIAQEQRAKKIAEIR-GDIVEAAWGNQIR 299

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           +Y F   + + D R N+    +  V+ G +   I   L
Sbjct: 300 SYVFHPYQMVKDLRTNVETTNINDVMDGDLGLFIEAYL 337


>gi|221217380|ref|ZP_03588851.1| peptide chain release factor 2 [Borrelia burgdorferi 72a]
 gi|221192658|gb|EEE18874.1| peptide chain release factor 2 [Borrelia burgdorferi 72a]
          Length = 348

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  E   A S + +KI  +++   + +DL  +    
Sbjct: 12  NEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDLFEIA 71

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +   L        ++    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 72  ENEKDTNGLEIEFNTLEKQYKDLLTI-----SYFKEELDANNAFLTIHSGAGGTEACDWV 126

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 127 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 185

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 186 PFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 245

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +
Sbjct: 246 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---Q 302

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 303 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 344


>gi|309804632|ref|ZP_07698697.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c]
 gi|308166024|gb|EFO68242.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c]
          Length = 359

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 6/340 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +LK   A  E +M++    +      +   A + +  K+  Y        D  T +  +
Sbjct: 15  DNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSAALADAKTAVELY 74

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           N + E   L +I     + +     N     LL     DD + +LEI +G GG+EA  + 
Sbjct: 75  NMEPENDMLMEITAEVEKLKNEF--NNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWA 132

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             LFRMY+R+        EV      D+ G K +   + G   F  +K E+GVHR+ R+ 
Sbjct: 133 NMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRIS 192

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ R HTS A+V V+PE  +  +++I  +D+RID  R+SG+GGQH+N T SAVRITH
Sbjct: 193 PFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITH 252

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+  + +++SQ QNR  AM +LRA+L+ +E  +   +  A +  Q    +   +IR
Sbjct: 253 LPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQ-KEINFGSQIR 311

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y F     + DHR +        V+ G +D  I   L  
Sbjct: 312 SYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
 gi|166225118|sp|A6LN93|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
          Length = 369

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 111/356 (31%), Positives = 175/356 (49%), Gaps = 24/356 (6%)

Query: 6   HKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPIISKI 49
            ++I ++K R+ +I                E  M ES   +   +       IS    +I
Sbjct: 7   KQRIDEVKKRYEDIVKVFHPEDKKKELEELEKLMGESDFWNDQKRA----KEISQNAQRI 62

Query: 50  SIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
                   + ++    +       E        +  +  +I          L+  +  D 
Sbjct: 63  RKIIDDMVDIENKLEDLEAGLELLEEDATFLDTIKQLIDDIERKVKTFELELILNEKFDS 122

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
            +  L I  G GG+E+  +   L RMY R+A  R + V+++     ++ G K  +  I G
Sbjct: 123 SNAYLSIHPGAGGTESQDWASMLLRMYMRWAERRGFDVQIVDYQPGEEAGIKSAMLYIKG 182

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMR 228
             V+  +K+E GVHR+ R+   +A+ R HTS A+V V+PE  +  DV+I  ED+RIDT R
Sbjct: 183 EYVYGYLKYERGVHRLVRISPFDANKRRHTSFASVNVMPEIEDDIDVEINPEDLRIDTYR 242

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG+GGQ+VN T+SAVRITHIPTGI+V   +E+SQ QN+  AMKVL+ARLY +E ++   
Sbjct: 243 ASGAGGQYVNKTESAVRITHIPTGIVVTCQTERSQLQNKETAMKVLKARLYQLELEKRQK 302

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINP 342
           +     + ++       +IR+Y F     + DHR N+    ++ V+ G ID  I  
Sbjct: 303 QLEEI-QGELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGDIDIFIES 357


>gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
          Length = 338

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 172/344 (50%), Gaps = 12/344 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +K    + +L+M ++   +              +   + IY     E +++  +      
Sbjct: 1   MKQEKQQNDLKMEDADFWNNLELSQHIVKRNKELERTLDIYSSAFSELEEVEILFELTKE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           DSE+    +  +  + +++ +L        L     D  + IL I AG+GG +A  +   
Sbjct: 61  DSELEKELEQCINELSEKMEQL----KIQTLLDGEYDGNNAILSIHAGSGGLDAQDWAQM 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     ++V  L S  + + G K +   I G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYLRFCHDMGYRVIELDSLSDSEAGIKSVTLQIEGPNAYGFLKSEKGVHRIVRISPF 176

Query: 192 EASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           ++SG+ HTS  +V V+PE  +  +VDI   D++IDT RASG+GGQHVN TDSAVRITHIP
Sbjct: 177 DSSGKRHTSFTSVDVIPEMDDTVEVDIDTNDLKIDTYRASGAGGQHVNKTDSAVRITHIP 236

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIR 307
           TGI++   +E+SQH NR  AMK+L ++L D++ +    +         QI  G    +IR
Sbjct: 237 TGIVITCQNERSQHSNRETAMKMLFSKLMDIKIREHKEKIEDISGEYSQIAWG---SQIR 293

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +Y F     + DHR N  +  ++ V+ G I   IN  L   +  
Sbjct: 294 SYVFQPYTLVKDHRTNHEIGSVQSVMDGNIMPFINAYLKQQKQD 337


>gi|311111708|ref|YP_003982930.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
 gi|310943202|gb|ADP39496.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
          Length = 375

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 6/348 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  +K    ++  + S     D         +A+S   ++++          D+  ++ 
Sbjct: 25  DLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNLASRIDDVEVMVE 84

Query: 68  DHN-SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D    +    E  A  KE+R+  +E+  L+L     D +  ++ IR+G GG +AA
Sbjct: 85  LAQTEDESSAEDLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVVTIRSGAGGVDAA 144

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            F   L RMY R+A    +  +VL +S  ++ G K +   ++    F R+  E+G HR+ 
Sbjct: 145 DFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLV 204

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +  GR  TS A V V+P   + D  +IP  +I++D  R+SG GGQ VNTTDSAVR
Sbjct: 205 RISPFDNQGRRQTSFAAVEVIPLIEQTDALEIPESEIKVDVFRSSGPGGQSVNTTDSAVR 264

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V+  +EKSQ QNR  A++VL++RL  + +++   ++         S    +
Sbjct: 265 MTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLMLRQEQEDAKKKELAGDIKAS--WGD 322

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           ++R+Y     + + D R          VL G ++  I   +    +  
Sbjct: 323 QMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRWRASGR 370


>gi|317507095|ref|ZP_07964856.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316254589|gb|EFV13898.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 372

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 167/347 (48%), Gaps = 8/347 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A++E + ++    +   +  E  + ++   + +      +    DLH +  
Sbjct: 24  DLSKLEAEIADLESQAADPSLWEDQDRGQEVTSGLARRQATLRAVTALRSRLDDLHVLYE 83

Query: 68  DHNSDS--EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
               DS  E ++         +    ++E  +    L     D++  ++ IR+G GG +A
Sbjct: 84  LAEDDSGAEGQEALAEADAERKALREDIET-LEVRTLLNGEYDEREALVTIRSGAGGIDA 142

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A +   L RMY R+A   K  VE+   S  ++ G K     +     +  +  E G HR+
Sbjct: 143 ADWAQMLMRMYIRWAERHKHPVEIYDISYAEEAGIKSATFAVKSAYAYGTLSVEQGTHRL 202

Query: 186 QRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       ++IP  ++R+D  R+SG GGQ VNTTDSAV
Sbjct: 203 VRISPFDNQGRRQTSFADVEVLPVVGTTDHIEIPESEVRVDVYRSSGPGGQSVNTTDSAV 262

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+TH+PTG++V   +EKSQ QN+L AM+VL+A+L +  R+    + +A  K   GS    
Sbjct: 263 RLTHLPTGVVVTCQNEKSQLQNKLSAMRVLQAKLLERRRQEEQEQLNAL-KGDGGS-SWG 320

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            ++R+Y  +  + + D R    +     VL G ID  +   +   +A
Sbjct: 321 TQMRSYVLAPYQMVKDLRTEYEVGNPTTVLDGDIDGFLESGIRWRRA 367


>gi|330504612|ref|YP_004381481.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01]
 gi|328918898|gb|AEB59729.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01]
          Length = 304

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 103/309 (33%), Positives = 161/309 (52%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++ I+  I        + +DL  +  + N +  + D+        E   +     + +  
Sbjct: 2   LAQIVETIDDLTGSLADSRDLLEMAAEENDEGAVNDIVAEVERLREILEK-----LEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +C L+I+AG+GG+EA  +   L RMY R+A  R +  E++  S+ +  G K
Sbjct: 57  MFSGEMDANNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  +++I   
Sbjct: 117 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPA 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA+LY+
Sbjct: 177 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 236

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++     +   + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 237 LEMQKRNAASQALEDSKSDIGWG---HQIRSYVLDDSRIKDLRTGVERSDCQKVLDGDLD 293

Query: 338 DIINPLLTA 346
             +   L  
Sbjct: 294 GYLEASLKQ 302


>gi|127511745|ref|YP_001092942.1| peptide chain release factor 2 [Shewanella loihica PV-4]
 gi|126637040|gb|ABO22683.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           loihica PV-4]
          Length = 293

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 95/297 (31%), Positives = 157/297 (52%), Gaps = 12/297 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           D   ++ + L  +  + + +    D         ++        + +  +    +D   C
Sbjct: 2   DSGLEDVEGLLELAVEEDDEDTFNDANSELAGLEKRLEE-----LEFRRMFSGPNDASDC 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            L+I++G+GG+EA  +   + RMY R+   + +K E++  +D D  G K      +G   
Sbjct: 57  YLDIQSGSGGTEAQDWANMVLRMYLRWGEAKGYKPELIEVTDGDVAGIKGATIKFTGEYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASG 231
           F  ++ E+GVHR+ R    ++SG+ HTS  +V V PE  +  ++DI   D+RID  RASG
Sbjct: 117 FGSLRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPADLRIDVYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER- 289
           +GGQHVN T+SAVRITH+PT  +V   +++SQH+N+  AMK L+A+L+++E  +   E+ 
Sbjct: 177 AGGQHVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLFELEMHKQNAEKQ 236

Query: 290 -SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 237 AAEDAKSDIGWG---SQIRSYVLDDARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|238783657|ref|ZP_04627677.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
 gi|238715370|gb|EEQ07362.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
          Length = 289

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 99/294 (33%), Positives = 157/294 (53%), Gaps = 12/294 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++   L  +  + + +    +            +     ++ +  +     D  +C L++
Sbjct: 2   EDVTGLLELAIEADDEETFNEAVAE-----LDILDGKLGQLEFRRMFSGEYDSANCYLDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K     I G   F  +
Sbjct: 57  QAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVN T+SAVRITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    +
Sbjct: 177 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 NKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|225549349|ref|ZP_03770322.1| peptide chain release factor 2 [Borrelia burgdorferi 94a]
 gi|225370207|gb|EEG99647.1| peptide chain release factor 2 [Borrelia burgdorferi 94a]
          Length = 348

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  E   A S + +KI  +++   + +DL  +    
Sbjct: 12  NEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDLCEIA 71

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +   L        ++    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 72  ENEKDTNGLEIEFNTLEKQYKDLLTI-----SYFKEELDANNAFLTIHSGAGGTEACDWV 126

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 127 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 185

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 186 PFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 245

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +
Sbjct: 246 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---Q 302

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 303 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 344


>gi|168051671|ref|XP_001778277.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670374|gb|EDQ56944.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 387

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 13/347 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L  R  E+++ +++    +   K    + E  A+S  +  +   + +  E   L  + 
Sbjct: 46  KKLLARVQELDVELAKPNLWENAAKAGQFSRERGALSGQVKSVISMEDELLEHVGLAELA 105

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N    + D+ Q      +            + L     D +SC +E++AG GG+E+ 
Sbjct: 106 HEENDTQVVTDVTQGLAELRKTASE-----RELVALLSGEHDSRSCFIEVQAGAGGTESM 160

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   + RMY  +A  R ++V V+     ++ G K     + G   +   K E+GVHR+ 
Sbjct: 161 DWAAMVMRMYRMWAQTRDYEVTVVDEMPGEEAGIKRATIRVDGLYAYGYAKTEAGVHRLV 220

Query: 187 RVPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           R+   +A  R HTS A VAV+P  + +E+ ++I   D+RI+  RA G+GGQHVN T+SAV
Sbjct: 221 RISPFDAGKRRHTSFAAVAVIPALDESEVSIEIGESDLRIERFRAGGAGGQHVNKTESAV 280

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RI HIPTGI+    +++SQH+N+  A+ +L++RL+ +E  R A   + + +         
Sbjct: 281 RIIHIPTGIVTQCQADRSQHRNKATALSMLQSRLHQMEVTRRAKANAQHTQSL-SDVSWG 339

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +IR+Y     + + D R N  +     +L G ID  I   L +  A
Sbjct: 340 NQIRSYVLQPYQMVKDLRTNYEVSDPSSILDGEIDGFIMAYLASSSA 386


>gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
           652]
 gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
           652]
          Length = 342

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 104/333 (31%), Positives = 165/333 (49%), Gaps = 10/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
             +  +    +   +  +       +   I+   Q +Q+ +D   V      + E     
Sbjct: 2   NNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVRQLEQQLKD--NVELIELGEEEGDGGV 59

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             E     K ++          +     D     LE+ +G GG+E+  +   L RMY R+
Sbjct: 60  VKEAEDALKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  +++KVE+L   D ++ G K     + G   +  +K ESGVHR+ R+   +++ R HT
Sbjct: 120 AERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHT 179

Query: 200 SAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S +++ V P     I+++I   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V   
Sbjct: 180 SFSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR 315
            E+SQH+NR +A ++LRAR+Y+ E K+   A    A  K  IG G    +IR+Y     +
Sbjct: 240 QERSQHKNRAKAWEMLRARMYEAELKKREEAANAEAASKTDIGWG---HQIRSYVLQPYQ 296

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + D R  +     + VL G +++ +   L   
Sbjct: 297 LVKDLRTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|114771120|ref|ZP_01448560.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
 gi|114548402|gb|EAU51288.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
          Length = 375

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 175/352 (49%), Gaps = 15/352 (4%)

Query: 13  KNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           ++R  E +         +      KL  E   +S  IS         Q+  +L  +    
Sbjct: 29  EHRMEEFDAMSENPDLWNNPEKAQKLMRERQMLSDSISNFKELSSNLQDNIELIELGEIE 88

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             +  I++     ++  ++  +          L     D     L+I AG GG+E+  + 
Sbjct: 89  EDEVIIKEAENNILIIQQESAK-----QELEALLNGEVDSNDTFLQINAGAGGTESCDWA 143

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R+A  + ++V+ +  S  D+ G K +   I G   +  MK ESGVHR+ R+ 
Sbjct: 144 NMLARMYVRWAEQKGYQVDRMEESVGDEAGIKSVTYQIKGHNAYGWMKSESGVHRLVRIS 203

Query: 190 ATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++ + HTS ++V V P   +  D++I   +IR+DT R+SG+GGQHVNTTDSAVRITH
Sbjct: 204 PFDSNAKRHTSFSSVWVYPVVDDNIDIEINPSEIRVDTYRSSGAGGQHVNTTDSAVRITH 263

Query: 249 IPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERI 306
           IPT I+V SSEKSQHQNR   M  L++RLY++E ++     + + + K   G G+   +I
Sbjct: 264 IPTNIVVQSSEKSQHQNRANCMAALKSRLYELEMRKRTEGIQEAHDNKGDAGWGN---QI 320

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R+Y     + + D R N+     + VL G +D  +   L    A    + ++
Sbjct: 321 RSYVLHPYQMVKDLRTNVETSDSQGVLNGDLDMFMAATLALDVAGKTRAEAQ 372


>gi|148549433|ref|YP_001269535.1| peptide chain release factor 2 [Pseudomonas putida F1]
 gi|148513491|gb|ABQ80351.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           putida F1]
          Length = 304

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++ ++  +        + +DL  +  + N ++ + D+         + + E   ++ +  
Sbjct: 2   LAQVVETLDKLSGGLADCKDLLDMAVEENDENAVSDVVTE-----LEGLEENLAQLEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S+ +  G K
Sbjct: 57  MFSGEMDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  ++DI   
Sbjct: 117 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPS 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA+LY+
Sbjct: 177 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 236

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++     +   + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 237 LEMQKRNAASQALEDSKSDIGWG---HQIRSYVLDDSRIKDLRTGVERSDCQKVLDGDLD 293

Query: 338 DIINPLLTA 346
             +   L  
Sbjct: 294 QYLEASLKQ 302


>gi|109120568|ref|XP_001090893.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
           [Macaca mulatta]
 gi|109120570|ref|XP_001090782.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
           [Macaca mulatta]
          Length = 445

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 131/363 (36%), Positives = 210/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLNKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I+++I  L NE+   LLPK+  D    ILE+ +G  T
Sbjct: 136 MCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLLPKEKYDKNDVILEVTSGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 196 GGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 255

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 256 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHV 315

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 316 NTTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKCQQRSARKLQ 375

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R++DHRI   +  ++  L G   +D +I  LL +   + +  
Sbjct: 376 VGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAVVE 435

Query: 355 ASE 357
             +
Sbjct: 436 LLD 438


>gi|313500280|gb|ADR61646.1| PrfB [Pseudomonas putida BIRD-1]
          Length = 304

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++ ++  +        + QDL  +  + N +  + D+         + + E   ++ +  
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTE-----LESLEENLAQLEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S+ +  G K
Sbjct: 57  MFSGEMDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  +++I   
Sbjct: 117 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPS 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA+LY+
Sbjct: 177 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 236

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++     +   + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 237 LEMQKRNAASQALEDSKSDIGWG---HQIRSYVLDDSRIKDLRTGVERSDCQKVLDGDLD 293

Query: 338 DIINPLLTA 346
             +   L  
Sbjct: 294 QYLEASLKQ 302


>gi|297848140|ref|XP_002891951.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337793|gb|EFH68210.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 470

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 166/345 (48%), Gaps = 17/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L  R   +   +++    +  I   K++ E+ +++  +  +  ++++  E  D+  + 
Sbjct: 124 KKLLVRLKVLSAELNKPDLWNDPIHAGKISREHGSLTGKMKGVMTFERELLEHIDMLKLA 183

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      +  +  +                  L    +D  SC +E++AG GG+E+ 
Sbjct: 184 KEENDTELESETLKAMMDMRRVSKE-----KELEALLSAENDPCSCYIEVQAGAGGTESN 238

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   +  MY+ +A  RK+ V V+  +  +  G K     ++G   +   K E GVHR+ 
Sbjct: 239 DWASMVMEMYKTWAQRRKFSVTVVDEAAGEIAGIKRATIKVNGEYSYGYAKAEVGVHRLV 298

Query: 187 RVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           R+   ++  R HTS A VAV+P        V I   D+RI+  R+ G+GGQH NTTDSAV
Sbjct: 299 RISPFDSGKRRHTSFAAVAVIPILGDGSTRVQINDSDLRIERFRSGGAGGQHANTTDSAV 358

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGD 301
           RI HIPTGI     +E+SQH N+  AM VL++RL  +E  R     + + +   +I  G+
Sbjct: 359 RIIHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGN 418

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IRTY     R + D R N  +   + VL+G +D  I   L+
Sbjct: 419 ---QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 460


>gi|332160509|ref|YP_004297086.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318607022|emb|CBY28520.1| peptide chain release factor 2; programmed frameshift-containing
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664739|gb|ADZ41383.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863446|emb|CBX73565.1| peptide chain release factor 2 [Yersinia enterocolitica W22703]
          Length = 289

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 99/294 (33%), Positives = 156/294 (53%), Gaps = 12/294 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
            +   L  +  + + +    +            +     ++ +  +     D  +C L++
Sbjct: 2   DDVTGLLELAIEADDEETFNEAVAE-----LDILDGKLGQLEFRRMFSGEYDSANCYLDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K     I G   F  +
Sbjct: 57  QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVN T+SAVRITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    +
Sbjct: 177 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 NKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|149730260|ref|XP_001492759.1| PREDICTED: similar to Mitochondrial translational release factor 1
           [Equus caballus]
          Length = 446

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 127/360 (35%), Positives = 209/360 (58%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  ++  +    + +     L   +A ++P+ +      + +Q  ++L +
Sbjct: 77  RKYMEELNKEYRTLDQCLQRVSANEGDRRSLNRRHAELAPLAAIYREIQEAEQAIEELES 136

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   + +++  L  E+   L+PK+  D    ILE+ +G  T
Sbjct: 137 MCKSLNKQDEKQLQELALEERQTVAQKLNALYRELFQSLVPKEKYDKNDVILEVTSGRTT 196

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y++ ++WK E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 197 GGDICQQFTREIFDMYQNYSSYKRWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 256

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHV 316

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ H+PTG++V    E+SQ +N+  A++VLRARLY    ++   ++ + RKLQ
Sbjct: 317 NTTDSAVRLVHVPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDKRQQQSARKLQ 376

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 377 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRNIKEFLHGEKCLDHLIQRLLQSADEEAITE 436


>gi|28198320|ref|NP_778634.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
 gi|71897686|ref|ZP_00679931.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|182680959|ref|YP_001829119.1| peptide chain release factor 2 [Xylella fastidiosa M23]
 gi|28056390|gb|AAO28283.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
 gi|71732589|gb|EAO34642.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|182631069|gb|ACB91845.1| peptide chain release factor 2 [Xylella fastidiosa M23]
 gi|307579427|gb|ADN63396.1| peptide chain release factor 2 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 302

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 104/285 (36%), Positives = 153/285 (53%), Gaps = 11/285 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D E+      +V   + ++ +LE +           D  +  ++I+AG GG+EA
Sbjct: 14  LAEIEQDQEMLQAVLNDVDIYQLQVEKLEFQRM----FSGKMDGANAFVDIQAGAGGTEA 69

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R WK E+L  S  +  G K     + G   +  +K E+GVHR+
Sbjct: 70  QDWAEMLLRMYLRWAEGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRL 129

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    ++  R HTS  +V V PE    ID++I   D++ D  R+SG+GGQHVN T+SAV
Sbjct: 130 VRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAV 189

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           RITH+P+GI+V   +E+SQH NR RAMK+L A+LY+ E ++   E+      K  IG G 
Sbjct: 190 RITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWG- 248

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR Y   Q RI D R  +     + VL G +D+ I   L A
Sbjct: 249 --SQIRNYVLDQSRIKDLRTGVERSDTQKVLDGDLDEFIEASLKA 291


>gi|288957379|ref|YP_003447720.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
 gi|288909687|dbj|BAI71176.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
          Length = 322

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 156/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   ++     ++   +  +L  +       + + D         ++  +    
Sbjct: 1   MRERTQLDTSVAGYRALERDLSDSLELIEMGEMEEDATVVADAEAQLYGLRDRANK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L     D   C +E+ AG GG+EA  +   L RMY R+A    +K E L  +  
Sbjct: 57  -LQIESLLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKTEWLDETPG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K E+GVHR+ R+   ++  R  TS A V++ P    +ID
Sbjct: 116 EEAGIKSATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSISPVIDDKID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I  +D RIDT RASG+GGQH+N TDSAVRITHIPT I+V    E+SQH+NR +A  +L
Sbjct: 176 IEINEKDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K   +  +A    K  IG G    +IR+Y     + + D R  +   + + 
Sbjct: 236 RARLYERELKIREDAAAALEATKTDIGWG---HQIRSYVLHPYQMVKDLRTEVETSQSQA 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L + 
Sbjct: 293 VLDGALDPFLEAALASR 309


>gi|302307223|ref|NP_983812.2| ADL284Cp [Ashbya gossypii ATCC 10895]
 gi|299788896|gb|AAS51636.2| ADL284Cp [Ashbya gossypii ATCC 10895]
          Length = 397

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 138/349 (39%), Positives = 200/349 (57%), Gaps = 14/349 (4%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
                +E  +S+  S D  ++  ++Y+ +S I+     Y       ++L  +I     D+
Sbjct: 44  AELETLEKLLSKGESFD--VEKQKKYSKLSSIVDTFRAYQDNVHMYRELQDMIAQ---DA 98

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
            +R  AQ E+  +   +    + +   LLP     +K CI+E+R G GG EA +F  DL 
Sbjct: 99  SLRTEAQAELDELAPTLARSADTLLDKLLPPHPFAEKPCIVELRPGVGGIEAMIFTQDLL 158

Query: 134 RMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            MY  YA   +WK  V S+++N  G G  E + +I   G + R+KFESGVHRVQR+PATE
Sbjct: 159 NMYIGYAQHHRWKWSVTSATENTTGAGLSEAILSIDEPGSYDRLKFESGVHRVQRIPATE 218

Query: 193 ASGRVHTSAATVAVLPEA------AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           + GR HTS A V VLP+          +      +IRID MRASG GGQHVNTTDSAVRI
Sbjct: 219 SKGRTHTSTAAVVVLPKMAEEAESDAYERTFKPGEIRIDVMRASGKGGQHVNTTDSAVRI 278

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH P+GI +    E+SQH+N+ +A ++LRA+L D+ERK       + RK Q+ S DRS++
Sbjct: 279 THFPSGIAIHMQEERSQHRNKAKAFQILRAKLADLERKEREARERSARKDQVSSTDRSDK 338

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIG 353
           IRTYNF Q R+TDHR  ++L+ L  V+ G  +D++I+ +      +   
Sbjct: 339 IRTYNFPQNRVTDHRCAVSLHALAEVVTGERLDELIDSMARYDSEQKAK 387


>gi|297693940|ref|XP_002824258.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 1 [Pongo abelii]
 gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 2 [Pongo abelii]
          Length = 445

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 133/363 (36%), Positives = 209/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +     + +    L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENQRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E  AI+++I  L NE+   L+PK+  D    ILE+ AG  T
Sbjct: 136 MCKSLNKQDEKQLQELALEERQAIDQKINMLYNELFQSLVPKEKYDKNDVILEVAAGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG GV+  +K+E 
Sbjct: 196 GGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEG 255

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G GGQHV
Sbjct: 256 GIHRVQRIPEVGLSSRMQRIHTGTTSVIVLPQPDEVDVKLDPKDLRIDTFRAKGPGGQHV 315

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 316 NKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQ 375

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q RI+DHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 376 VGTRAQSERIRTYNFTQDRISDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIVE 435

Query: 355 ASE 357
             +
Sbjct: 436 LLD 438


>gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 327

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 95/329 (28%), Positives = 173/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   + K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEETDRFKIE------TLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + ++++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFSIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITHIPTGI+V   
Sbjct: 175 SFASIEVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINMFITQYLK 322


>gi|88803344|ref|ZP_01118870.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
 gi|88780910|gb|EAR12089.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
          Length = 365

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 167/368 (45%), Gaps = 24/368 (6%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+ +R  ++                E + +     D   +       +    
Sbjct: 1   MITLDQLKDIADRIEKLKSYLEIDKKLIEIANEEEKTTNPGFWDHPKEAEVAIKELRFKK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             ++ Y        D+  +   +            +   +   + ++E    +  +  + 
Sbjct: 61  KWVTDYQHAITLNDDVIVLYEFYKEGDVAETEMDEQFEKVSSFLEDIE----FRNMLSEE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D  +  ++I AG GG+E+  +V  L RMY  +A  + +K++ L+    D  G K I   
Sbjct: 117 GDSLAATIQITAGAGGTESCDWVEMLSRMYSMWAEKQGFKLKTLNYQAGDVAGIKTITIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRID 225
           I G   F  +K E+GVHR+ R+   +++G+ HT+  +V V P A +     +   DI I 
Sbjct: 177 IEGDFAFGWLKGENGVHRLVRISPFDSNGKRHTTFGSVYVFPVADDSIEIAVNPADIEIV 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+SG+GGQ+VN  ++ V++TH PTGI +  S+ +SQH NR  AMK+L+++LY++E K+
Sbjct: 237 TARSSGAGGQNVNKVETKVQLTHKPTGIQIQCSNSRSQHDNRATAMKMLKSQLYEIELKK 296

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPL 343
               R+     ++ + +   +IR Y     + + D R       ++ V+ G I+  +   
Sbjct: 297 QQATRADIEAGKLKN-EWGSQIRNYVMHPYKLVKDVRTAYETGNVDAVMDGNINPFLKSY 355

Query: 344 LTAHQAKM 351
           L  +  K 
Sbjct: 356 LMKNGQKK 363


>gi|225549713|ref|ZP_03770678.1| peptide chain release factor 2 [Borrelia burgdorferi 118a]
 gi|225369673|gb|EEG99121.1| peptide chain release factor 2 [Borrelia burgdorferi 118a]
          Length = 348

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  E   A S + +KI  +++   + +DL  +    
Sbjct: 12  NEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDLCEIA 71

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +   L        ++    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 72  ENEKDTNGLEIEFNTLEKQYKDLLTI-----SYFKEELDANNAFLTIHSGAGGTEACDWV 126

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 127 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 185

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 186 PFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 245

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +
Sbjct: 246 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---Q 302

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 303 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 344


>gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF4000_15H13]
          Length = 328

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 105/328 (32%), Positives = 159/328 (48%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    D            + I S +  +                   + E  +    E
Sbjct: 1   MAQPGFWDKQEAAKAVIEESNSIKSWLEPWQALDGRVS--ELRALVELLEEEDDEELAEE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
             +   E+ +    +    + +  DD +  I+ I  G GG+E+  +   L RMY R+A  
Sbjct: 59  FASGVDELTKGVEALELRTMLQGDDDHRGAIITIHPGAGGTESQDWAQMLVRMYTRWAER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             + V VL     ++ G K     I+G   +  +K E GVHR+ R+   +A  R HTS A
Sbjct: 119 GGFTVNVLDLQPAEEAGIKSATLEINGESAYGFLKAEGGVHRLVRISPFDAQARRHTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V + P+  +  +++I  +D+R+DT RASG+GGQHVN TDSAVR+TH PTGI+V    E+
Sbjct: 179 SVFIYPQVDDSIEIEINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPTGIVVQCQQER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           SQH+NR  AMK+L ARLY    +    ER+     K  IG G+   +IR+Y F     + 
Sbjct: 239 SQHKNRATAMKMLLARLYQHALEEKKKERAVLEASKRDIGFGN---QIRSYVFQPYTMVN 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR  L +  ++ V+ G ID  I   L 
Sbjct: 296 DHRTELKITDVQSVMDGAIDPFIEAYLK 323


>gi|242041179|ref|XP_002467984.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
 gi|241921838|gb|EER94982.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
          Length = 467

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 97/340 (28%), Positives = 157/340 (46%), Gaps = 11/340 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +  R  ++ + +      +  +           ++ KI   +Q +QE  +   ++     
Sbjct: 123 ILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEMLRLARE 182

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           +++     +      +      E       L    +D   C +E++AG GG+E+  +   
Sbjct: 183 ENDNELEMESMRALADMRRSAKEK--ELNALLSGDNDSCPCFIEVQAGAGGTESMDWAAM 240

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           +  MY  +A  R + V V+     +  G K     + G   F   K E GVHR+ R+   
Sbjct: 241 VMNMYRSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 300

Query: 192 EASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
           ++  R HTS A VAV+P    A     I   D+RI+  R+ G GGQH NTT+SA+RI HI
Sbjct: 301 DSGKRRHTSFAAVAVIPILGDAASRYQIKDSDLRIERFRSGGPGGQHANTTESAIRIVHI 360

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERI 306
           PTGI     +E+SQH N+  AM VL++RL  +E  R A   + + +   +I  G+   +I
Sbjct: 361 PTGISATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGN---QI 417

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y     R + D R N  +   + VL+G IDD I   L+
Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFILNYLS 457


>gi|118496781|ref|YP_897831.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida U112]
 gi|194324538|ref|ZP_03058310.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida FTE]
 gi|118422687|gb|ABK89077.1| peptide chain release factor 2 [Francisella novicida U112]
 gi|194321373|gb|EDX18859.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida FTE]
          Length = 325

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETL-------SELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    + +     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V + SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADGHGFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+ D R  +     + VL G +D  I   L 
Sbjct: 292 RVKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|270264900|ref|ZP_06193164.1| peptide chain release factor 2 [Serratia odorifera 4Rx13]
 gi|270041198|gb|EFA14298.1| peptide chain release factor 2 [Serratia odorifera 4Rx13]
          Length = 248

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 98/249 (39%), Positives = 141/249 (56%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C L+I+AG+GG+EA  +   L RMY R+A  + +K EV+  SD D  G K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                I G   F  ++ E+GVHR+ R    ++ GR HTS ++V + PE  +         
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDDIDIDINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITH+PT I+V   +++SQH+N+ +A K LRA+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++     ++  + K  IG G    +IR+Y     RI D R N+     + VL G +D
Sbjct: 181 FEMQKKNADKQQMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTNVETRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 KFIEASLKA 246


>gi|15842676|ref|NP_337713.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551]
 gi|13882995|gb|AAK47527.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551]
          Length = 371

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 161/347 (46%), Gaps = 6/347 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L++R  ++E   S+    D   +     + +S    ++   ++ ++   DL  +  
Sbjct: 24  DVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRLDDLPVLYE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEI-RELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               ++       +     E +  R          L     D++  ++ IR+G GG +AA
Sbjct: 84  LAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAA 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A   K+ VEV  +S  ++ G K     +     +  +  E G HR+ 
Sbjct: 144 DWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +   R  TS A V VLP       +DIP  D+R+D  R+SG GGQ VNTTDSAVR
Sbjct: 204 RISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIP+GI+V   +EKSQ QN++ AM+VL+A+L +  R     E  A  K   GS     
Sbjct: 264 LTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERXRLEERAELDAL-KADGGS-SWGN 321

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           ++R+Y     + + D R    +     VL G +D  +   +     +
Sbjct: 322 QMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWRNRR 368


>gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
 gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
          Length = 325

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 94/329 (28%), Positives = 173/329 (52%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M      +   +  +  +    +   + K +      ++   L  ++ + + D +   ++
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDDDMKKEIIS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + + +  E +  ++E       L     D  + I+ + +G GG++A  +   LFRMY R+
Sbjct: 61  EYKNIKEEIDKFKIE------TLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + ++++   + +D G K +   I+G  V+  +K E G+HR+ R+    A+G+  T
Sbjct: 115 AEKEGFTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ +LPE   + +++I  ED++IDT RA G+GGQHVN T+SAVRITHIPTGI+V   
Sbjct: 175 SFASIEILPELTEDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQH N+  AMKVL+++L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQHTNKETAMKVLKSKLVELK-ERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR       ++ V+ G I+  I   L 
Sbjct: 294 KDHRTGAETSNVDSVMNGDINIFITQYLK 322


>gi|167761288|ref|ZP_02433415.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704]
 gi|167660954|gb|EDS05084.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704]
          Length = 312

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 9/314 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +  ++  I        +   L  +  +    S  R++ +               
Sbjct: 1   MKELKHLKELVETIQNLYASYDDINLLIEMGYEDEDPSMAREIEEEIRGFETSYEE---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L     D  + I+ I AG GG+E+  +   L+RMY R+A  + + ++VL   D 
Sbjct: 57  -LRIQTLLSGEYDACNAIVTIHAGAGGTESCDWASMLYRMYSRWAERKGFTIQVLDYLDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV 215
           D  G K +   ++G   +  +K E GVHR+ R+    A+G+  TS A+  V+P+  +   
Sbjct: 116 DIAGIKTVTFEVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEID 175

Query: 216 DIPLED-IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
               +D ++IDT RASG+GGQHVN T SA+RITH+PTGI+V   +E+SQH N+ +AM++L
Sbjct: 176 IEIADDDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQML 235

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVL 332
           + +L  ++ +  A + S  R  ++       +IR+Y       + DHR N+    +  V+
Sbjct: 236 KVKLQLMKEQEQAEKVSDIR-GEVKEIGFGNQIRSYVMQPYTMVKDHRTNVENSNVGAVM 294

Query: 333 QGYIDDIINPLLTA 346
            G ID  IN  L  
Sbjct: 295 DGSIDMFINAYLKQ 308


>gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
 gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
          Length = 345

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 104/337 (30%), Positives = 167/337 (49%), Gaps = 16/337 (4%)

Query: 19  IELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
           +  +  +    +      KL  E   +   IS +   +Q+  +  +L  +  +      +
Sbjct: 4   LNNKSEDPNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDADVV 63

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
           R+  +       +  R          +     D     +E+ +G GG+E+  +   L RM
Sbjct: 64  REAEEALKALKTEAAR-----RQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRM 118

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y R+A  +++KVE+L   D ++ G K     + G   +  +K ESGVHR+ R+   +++ 
Sbjct: 119 YTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNA 178

Query: 196 RVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           R HTS +++ + P     I +DI   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+
Sbjct: 179 RRHTSFSSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIV 238

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNF 311
           V    E+SQH+NR +A  +LRAR+Y+ E  +   A    A  K  IG G    +IR+Y  
Sbjct: 239 VQCQQERSQHKNRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWG---HQIRSYVL 295

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              + + D R  +T    + VL G +++ +   L   
Sbjct: 296 QPYQLVKDLRTGVTSTAPDDVLDGDLNEFMEAALAHR 332


>gi|255987637|ref|YP_001884728.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
           17B]
 gi|255961470|gb|ACD21926.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
           17B]
          Length = 325

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 104/329 (31%), Positives = 175/329 (53%), Gaps = 13/329 (3%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E    +      ++T+E   I   I ++     K  + + L  ++ D + +S    + 
Sbjct: 1   MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVRSKLDDIEVLKEIMDDDDEESAYEIIN 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
            I+ +  E +   +E      +L     D  + IL +  G GG++A  +   L RMY R+
Sbjct: 61  NIKEIEEEIDNYNME------ILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRW 114

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              + +KVE++   + D+ G K +   + G   +  +K E G+HR+ R+    A+G+  T
Sbjct: 115 CEKKNYKVEMIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQT 174

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ VLPE   E D+DI  EDI+IDT RASG+GGQH+N TDSAVRITH+PTG++V   
Sbjct: 175 SFASMEVLPELTKEQDIDIRSEDIKIDTYRASGAGGQHINKTDSAVRITHLPTGVVVQCQ 234

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ  N+  AM +L+A+L +++ +R   E+  +   ++       +IR+Y F     +
Sbjct: 235 NERSQFSNKDTAMGMLKAKLIELK-ERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLV 293

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            DHR N+ +  +  V+ G +D  +N  L 
Sbjct: 294 KDHRTNVEVSNVTAVMDGDLDLFVNSYLK 322


>gi|170694748|ref|ZP_02885899.1| peptide chain release factor 2 [Burkholderia graminis C4D1M]
 gi|170140379|gb|EDT08556.1| peptide chain release factor 2 [Burkholderia graminis C4D1M]
          Length = 280

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 102/286 (35%), Positives = 156/286 (54%), Gaps = 12/286 (4%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D  +         A  + + +   ++ +  +  +  D  +  L+I+AG GG+E
Sbjct: 1   MAREEGDDETLVACE-----ADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTE 55

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L R Y RY   + +K EVL  +D D  G K     I G   +  ++ E+GVHR
Sbjct: 56  ACDWAAMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHR 115

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R    ++SG  HTS ++V V PE    I+VDI   D+RIDT RASG+GGQH+N TDSA
Sbjct: 116 LVRKSPFDSSGGRHTSFSSVFVYPEVDDSIEVDINPADLRIDTYRASGAGGQHINKTDSA 175

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           VRITH+P+GI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G
Sbjct: 176 VRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWG 235

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 236 ---HQIRSYVLDNSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 278


>gi|12323033|gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 426

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 167/345 (48%), Gaps = 17/345 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L  R   +   +++S   D      K++ E+ +++  +  +  ++++  E  D+  + 
Sbjct: 80  KKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLKLA 139

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N      +  +  +                  L    +D  SC +E++AG GG+E+ 
Sbjct: 140 KEENDSELESETLKALIDMRRVSKE-----KELEALLSADNDPCSCYIEVQAGAGGTESN 194

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   +  MY+ +A  RK+ V V+  +  +  G K     ++G   +   K E GVHR+ 
Sbjct: 195 DWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLV 254

Query: 187 RVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           R+   ++  R HTS A VAV+P        V+I   D+RI+  R+ G+GGQH NTTDSAV
Sbjct: 255 RISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAV 314

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGD 301
           RI HIPTGI     +E+SQH N+  AM VL++RL  +E  R     + + +   +I  G+
Sbjct: 315 RIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGN 374

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IRTY     R + D R N  +   + VL+G +D  I   L+
Sbjct: 375 ---QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 416


>gi|170751458|ref|YP_001757718.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
           2831]
 gi|170657980|gb|ACB27035.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
           2831]
          Length = 321

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 110/317 (34%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   ++ I   ++  ++   L  +      +S IR+            + +   
Sbjct: 1   MRERQQLDEAVTAIKKLERDLEDGATLIELGEMEGDESSIREGEAA-----ILAVEKEAA 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  RK+KVEV+  +D 
Sbjct: 56  SRQVETLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEVVEMTDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   ++S R HTS A+V V P     I+
Sbjct: 116 EEAGIKGATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVIDDRIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I   D RIDT R+SG+GGQHVNTTDSAVRITH PTGI+V    E+SQH+NR  A  +L
Sbjct: 176 IEIKESDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+        A  K  IG G    +IR+Y     + + D R        + 
Sbjct: 236 RARLYELELKKREEKANAEAAAKTDIGWG---HQIRSYVLQPYQLVKDLRTGTQSTDPDE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGDLDPFMEASLAQR 309


>gi|262401638|ref|ZP_06078204.1| peptide chain release factor 2 [Vibrio sp. RC586]
 gi|262352055|gb|EEZ01185.1| peptide chain release factor 2 [Vibrio sp. RC586]
          Length = 289

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 12/293 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++   L  +  +        ++         K       ++ +  +     D   C L++
Sbjct: 2   EDVDGLLELAIEAEDQETFDEIGPELEELEAKL-----EQLEFRRMFSGDHDASDCYLDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K EV+  S+ D  G K     I G   +  +
Sbjct: 57  QAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS A+  + PE  E  D++I   D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E ++   E+    +
Sbjct: 177 HVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 237 SKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 286


>gi|238763213|ref|ZP_04624178.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
 gi|238698486|gb|EEP91238.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
          Length = 289

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 100/294 (34%), Positives = 158/294 (53%), Gaps = 12/294 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++   L  +  + + +    +       A    +     ++ +  +     D  +C L++
Sbjct: 2   EDVTGLLELAIEADDEETFNEAV-----AELDILDGKLGQLEFRRMFSGEYDSANCYLDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K     I G   F  +
Sbjct: 57  QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVN T+SAVRITHIPT I+    +++SQH+N+ +AMK L+A+LY+ E ++   ++    +
Sbjct: 177 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 NKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|223982761|ref|ZP_03632989.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
           12042]
 gi|223965261|gb|EEF69545.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
           12042]
          Length = 327

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 172/330 (52%), Gaps = 10/330 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS--DSEIRDLAQ 80
           M+E    D            + +    + Y Q +Q    L   + + N   D E+++L  
Sbjct: 1   MNEEHFWDDPKAAQNVIRQCNGMKELEAKYHQMEQSLASLQETVDELNQNFDEELKELLD 60

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
           +E      +  + E     ++L     D  + ILE+  G GG+E+  +   L+RMY R+A
Sbjct: 61  MEYQDTLNQFEDFEV----MVLLSHPYDKNNAILELHPGAGGTESQDWASMLYRMYCRWA 116

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             + +KV +L   + ++ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS
Sbjct: 117 ERKGYKVTLLDYQEGEEAGIKSVSILIEGDMAYGYLKAEKGVHRLVRISPFDSSGRRHTS 176

Query: 201 AATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            A++ V+P+ ++  ++ I   D+ + TMRASG+GGQH+N TDSAVR+TH PTGI+V   +
Sbjct: 177 FASLDVMPQFSDEIEITIDERDLDVVTMRASGAGGQHINKTDSAVRMTHKPTGIVVSCQT 236

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           E+SQ QNR R M +L+++LY    +    + +A R  Q  + +   +IR+Y F     + 
Sbjct: 237 ERSQIQNRERCMNMLKSKLYQRMIEEQEAKLAAIRGEQ-KNIEWGSQIRSYVFCPYTMVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           DHR    +  ++ V+ G +D  I   L + 
Sbjct: 296 DHRTGYEMGSVQNVMDGDLDGFIFSYLKSQ 325


>gi|301760227|ref|XP_002915915.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281349098|gb|EFB24682.1| hypothetical protein PANDA_003948 [Ailuropoda melanoleuca]
          Length = 445

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 132/360 (36%), Positives = 208/360 (57%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +      +     L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMEDLNKEYRTLDECLQRMSVNEGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEELDS 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I ++I  L +E+   L+PK+  D    ILE+ AG  T
Sbjct: 136 MCKSLNKQDEKQLQELALEERQTIAQKINMLYSELFQSLVPKEKYDKNDVILEVTAGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y++ + WK E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 196 GGDICQQFTREIFDMYQNYSSYKNWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 255

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 256 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHV 315

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A++VLRARLY    ++   ++ + RKLQ
Sbjct: 316 NTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDKCQQQSTRKLQ 375

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 376 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRDIKEFLCGEKCLDQLIQTLLHSADEEAITE 435


>gi|332290838|ref|YP_004429447.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168924|gb|AEE18179.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 368

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 28/369 (7%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
            ++   I  L+ R   +                E +  +    +   +       +    
Sbjct: 1   MITTDHIKSLQERVDGLRRYLDVDRKRIEIQNEEEKTFDPNFWNDPKEAEAFMKTLRSKK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             ++ Y++ +   +DL  +           +  Q         I ++E    +  +  + 
Sbjct: 61  KWVTDYEEAQTFVEDLEVLYEFAKEGEAPEENVQDRYDKAAAFIEDIE----FRNMLSEE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D+ SC+L+I AG GG+E+  +   L RMY  YA  + WKV+ L+  + D  G K +   
Sbjct: 117 GDELSCVLQITAGAGGTESCDWAAMLMRMYLMYAEKQGWKVKELNFQEGDVAGIKTVSLE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I+++I   D  I 
Sbjct: 177 IEGDFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINPADYDIV 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+SG+GGQ+VN  ++ V++TH PTGI +  S  +SQH NR +A+++LR++LY++E ++
Sbjct: 237 TARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQLYELELRK 296

Query: 285 MANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341
               R+A    K  I  G    +IR Y     + + D R  +     + VL G ID  + 
Sbjct: 297 QMEARNAIEADKKAIEWG---SQIRNYVLHPYKLVKDVRTAVETGNTDAVLDGNIDLFLK 353

Query: 342 PLLTAHQAK 350
             L     +
Sbjct: 354 GYLMMMGQE 362


>gi|327395061|dbj|BAK12483.1| peptide chain release factor 2 PrfB [Pantoea ananatis AJ13355]
          Length = 293

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 95/297 (31%), Positives = 157/297 (52%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++ Q L  +  + + +    +       A    +     E+ +  +     D   C 
Sbjct: 3   QGLEDVQGLLDLAVEADDEETFNEAV-----AELDALEGKLGELEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           ++++AG+GG+EA  +   L RMY R+A  + +K E++  S+ +  G K +   +SG   F
Sbjct: 58  IDLQAGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAF 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  + PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITH+PTG +    +++SQH+N+ +AMK ++A+LY++E ++   E+  
Sbjct: 178 GGQHVNRTESAVRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQM 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 LEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 291


>gi|170114318|ref|XP_001888356.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636668|gb|EDR00961.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 338

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 141/341 (41%), Positives = 201/341 (58%), Gaps = 11/341 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MS    V    +L +E  A+    +    + Q +Q   +   ++ D    +         
Sbjct: 1   MSSPEDVLRLKQL-KESKALQ---TAWDEWTQTRQLLDNTAPLLDDP-DPTMRSLAVDEY 55

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                   + LE+    LL+P  T    S ++E+++G GGSE++LF+GDL RMY+R A +
Sbjct: 56  TSLTSTLTQFLESTFPSLLVPPSTTSHLSALMEMKSGVGGSESSLFLGDLLRMYQRLANV 115

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
            +WK +V++ +DND GG K+ +  I G G +  ++FESGVHRVQRVPATE+SGRVHTS  
Sbjct: 116 NRWKAQVVAQNDNDGGGTKDAIIEIKGDGAYDALRFESGVHRVQRVPATESSGRVHTSTV 175

Query: 203 TVAVLP----EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-S 257
           ++ VLP       + +    + DI+++ MRA G+GGQHVN T+SAVR+THIPTGI V+  
Sbjct: 176 SIVVLPLVEETDTQAEELFSMSDIKLEVMRARGAGGQHVNKTESAVRLTHIPTGITVSMQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRIT 317
            E+SQHQNR RA +VLR+RL D +  R   ER   R+  +   DRSE+IRTYNF Q R+T
Sbjct: 236 DERSQHQNRRRAFQVLRSRLLDKKLTREMEERRDTRRNLVRGADRSEKIRTYNFVQERVT 295

Query: 318 DHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           DHRI LTL  L  VL+G  I D I+ +   H   ++    +
Sbjct: 296 DHRIGLTLMNLSSVLEGDGIQDFIDAVKKDHADSILEDMLD 336


>gi|114704660|ref|ZP_01437568.1| peptide chain release factor 2 protein [Fulvimarina pelagi
           HTCC2506]
 gi|114539445|gb|EAU42565.1| peptide chain release factor 2 protein [Fulvimarina pelagi
           HTCC2506]
          Length = 321

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 103/327 (31%), Positives = 153/327 (46%), Gaps = 13/327 (3%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ I   +   +E  +L  +  +      + +             +    
Sbjct: 1   MRERQHLETNITAIRELESAVEENVELIAMGEEEGDGEIVSEAEATLKTLQTDAAK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     +E+ +G GG+E+  +   L RMY R+A    +KVEVL     
Sbjct: 57  -RQIETLLSGEADSNDTYMEVHSGAGGTESQDWASMLQRMYIRWAERANFKVEVLEEQGG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +   K ESGVHR+ R+   ++  R HTS A+V V P     ID
Sbjct: 116 EEAGIKSTTLLIKGHNAYGWAKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDTID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +++   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V    E+SQH+NR  A  +L
Sbjct: 176 IEVNESDVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVACQQERSQHKNRATAWNML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +ARLY+ E ++        A  K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 KARLYEAELEKREAEANAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGIESTSPQD 292

Query: 331 VLQGYIDDIINPLLTAHQAKMIGSASE 357
           VL G +D+ +   L         +  +
Sbjct: 293 VLDGELDEFMEAALAHRVEGKKAAVED 319


>gi|149177843|ref|ZP_01856442.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797]
 gi|148843333|gb|EDL57697.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797]
          Length = 331

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 94/337 (27%), Positives = 168/337 (49%), Gaps = 16/337 (4%)

Query: 23  MSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D   K      E   I  ++  ++   +  ++ + L   I +  S+  I +L+
Sbjct: 1   MGAAGFWDNQEKAQGLVNEMQQIQLVVKPLTQLVEGAEDLEVLIEFIEEEGSEDSIPELS 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                A  + +  +   +    +    +D  +  L I+AG GG++++ +   L RMY R+
Sbjct: 61  -----ATAERLESILEHLELQAMMSAPEDGSAAYLSIQAGEGGTDSSDWAEMLLRMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              R + VE+L  SD ++ G +     I G   +  +K E+G HR+ R+   +++GR HT
Sbjct: 116 CERRGFNVELLDRSDAEEAGIRSATIRIEGDYAYGYLKGETGNHRLIRISPFDSAGRRHT 175

Query: 200 SAATVAVLPEAAEIDVDIP--LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           S A V V P+  E+        +D+R DT RASG+GGQH+N TDSA+R+TH+ + ++V  
Sbjct: 176 SFAAVDVSPDMGEVAEIEISWDQDVREDTYRASGAGGQHINKTDSAIRLTHLESNVVVQC 235

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG 314
            + +SQH+NR  A K+L+++L+ +E+++   E +A R  K +IG G   + +R Y     
Sbjct: 236 QNNRSQHKNRAEARKMLKSKLFQIEQEKRDAELAAKRGGKSKIGFG--GQTVRNYVLHPD 293

Query: 315 R-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           + + D R          +L G +D  +   L     +
Sbjct: 294 QYVKDARTGFKAGNPGPILDGDLDGFLEAFLRWGMTE 330


>gi|169347339|ref|ZP_02866277.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
 gi|169293956|gb|EDS76089.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
          Length = 367

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 170/344 (49%), Gaps = 12/344 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI---SPIISKISIYDQKKQEEQDLHT 64
            I   +     + +   +    D   K    Y  +     I+ +  +         + + 
Sbjct: 25  DIESYRREIEGLTIVTEQDNFWDDTNKAKITYDKLNKMKKIVDQYDVLATTLNNLDETYE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++        +  L    +   E   +        ++L     D+ + I+EI  G GG+E
Sbjct: 85  LVKSSEEVEFLEILESDYLKFQEDLDK-----FEKMMLLSGEHDNLNAIVEIHPGAGGTE 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   LFRMY+RYA+ + WKVEVL   D D  G K +   I G  V+  +K E GVHR
Sbjct: 140 SQDWAEMLFRMYQRYASRKDWKVEVLDYLDGDVAGIKSVTMLIKGEDVYGHLKAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ R HTS A+V V+PE     ++DI  ED++IDT RASG+GGQH+N TDSA
Sbjct: 200 LVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIDIKNEDLKIDTYRASGAGGQHINKTDSA 259

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITHIPT I+V   S++SQ +NR +AM +L+++LY +  ++ A+E    +  Q      
Sbjct: 260 VRITHIPTNIVVTCQSQRSQIKNREQAMIMLKSKLYQLMLEKQASELKELKGEQ-KEIAW 318

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y       + D+R N      + VL G +D  I   L 
Sbjct: 319 GSQIRSYVLHPYSLVKDNRSNYESSNPKAVLDGDLDGFIYAYLK 362


>gi|182416046|ref|YP_001821112.1| peptide chain release factor 2 [Opitutus terrae PB90-1]
 gi|177843260|gb|ACB77512.1| peptide chain release factor 2 [Opitutus terrae PB90-1]
          Length = 341

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 102/330 (30%), Positives = 161/330 (48%), Gaps = 9/330 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D+  +  +  A ++ +   +       ++ +DL  ++    + SE    +  +
Sbjct: 1   MGAPTFWDSNERAQKHIAKLNGLKKAVLPVVAFHKKVEDLDVMVELVEAASEGERESYAQ 60

Query: 83  VLAIEKEIRELE-NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
            L         E + +          D  + IL I++G GG+E+  +   LFRMY R+A 
Sbjct: 61  ELDSNVTAMVEELDALEIASFLTGQFDRNNAILSIQSGAGGTESNDWADMLFRMYNRWAE 120

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            R + +EV      D  G  +    I G   +   K E GVHR+ R+   +A+ R HTS 
Sbjct: 121 RRGFSIEVQDVQAGDQAGITKATLLIKGENAYGYAKAERGVHRLVRISPFDANKRRHTSF 180

Query: 202 ATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSE 259
             V V+     ++DV+I   D+RID  R+SG GGQ VNTTDSAVRITH+ +GI +V  +E
Sbjct: 181 CAVDVVAEITEDVDVEINENDLRIDVYRSSGKGGQGVNTTDSAVRITHLSSGIVVVCQNE 240

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGR-I 316
           +SQ +N+  AM VL+ARLY+ ++     E       K +IG G    +IR+Y     + +
Sbjct: 241 RSQLKNKAAAMNVLKARLYEKKQDEQRAEMDKFYGEKGEIGWGA---QIRSYVLQPYQMV 297

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            D R  ++    + VL G +D  +N  L A
Sbjct: 298 KDLRTGVSTSDTQGVLDGDLDRFVNAWLRA 327


>gi|290511305|ref|ZP_06550674.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55]
 gi|289776298|gb|EFD84297.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55]
          Length = 299

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  +    Q  ++   L  +  +   +    +       A    + E   ++ +  +   
Sbjct: 1   MDTLDQMSQGLEDVAGLLELAVEAEDEETFNEAV-----AELDGLEEKLAQLEFRRMFSG 55

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D   C L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +  
Sbjct: 56  EYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTI 115

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
            I G   +  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RI
Sbjct: 116 KIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRI 175

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D  RASG+GGQHVN T+SAVRITHIPTG++    +++SQH+N+ +AMK ++A+LY++E +
Sbjct: 176 DVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQ 235

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +D  I 
Sbjct: 236 KKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIE 292

Query: 342 PLLTA 346
             L A
Sbjct: 293 ASLKA 297


>gi|27904871|ref|NP_777997.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|27904269|gb|AAO27102.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 337

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 182/341 (53%), Gaps = 15/341 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
            KNR  EI + +    +        K+ +E   +  ++++I+  D   QE  D+  +  +
Sbjct: 2   KKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKIDNDVQELIDILNL-EN 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N+ + I D    E   IEK I ELE    +L       D  SC ++I++G+GG EA  +
Sbjct: 61  SNNINSILDNVLYEFKNIEKSIHELEKCSMFL----GKYDYLSCYVDIQSGSGGVEAQDW 116

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+A  +K+K++++  +  +  G K     + G+  F   + E+G+HR+ R 
Sbjct: 117 ASMLLRMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFRTETGIHRLVRK 176

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A  R HTS ++V V P     I+VDI   D++ID  RASG+GGQHVN T+SAVRI 
Sbjct: 177 SPFNAHHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQHVNKTESAVRIR 236

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV--ERKRMANERSANRKLQIGSGDRSE 304
           H+PTGI+V   +++SQH+N+ +AMK L+A+LY+     K+   +   N KL IG G    
Sbjct: 237 HLPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENNKLNIGWG---H 293

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +IR+Y     RI D R  +    ++ VL G +D  +   L 
Sbjct: 294 QIRSYTLDNSRIKDLRTGVESKNIQSVLDGGLDLFVECSLR 334


>gi|78042486|ref|NP_001030185.1| peptide chain release factor 1, mitochondrial precursor [Bos
           taurus]
 gi|118573310|sp|Q3MHI7|RF1M_BOVIN RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|75773697|gb|AAI05225.1| Mitochondrial translational release factor 1 [Bos taurus]
 gi|296481791|gb|DAA23906.1| peptide chain release factor 1, mitochondrial precursor [Bos
           taurus]
          Length = 447

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 132/360 (36%), Positives = 208/360 (57%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +    + +     LT  +A ++P+        + +Q  ++L +
Sbjct: 78  QKYMEDLNKEYQTLDHCLHHISASEGDRRSLTRRHAELAPLAVIYKEIQEAEQAIEELES 137

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I ++I  L +E+   LLPK+  D    ILE+ +G  T
Sbjct: 138 MCKSLNKQDEKQLQELALEERQTIAQKINMLYSELFQSLLPKEKYDKNDVILEVTSGRTT 197

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y++ + W+ E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 198 GGDICQQFTREIFDMYQNYSSYKHWRFELLNYTPADYGGLHHAAARISGDNVYKHLKYEG 257

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP   E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 258 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPHPDEVDVKVDPKDLRIDTFRAKGAGGQHV 317

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A++VLRARLY    ++   ++ + RKLQ
Sbjct: 318 NTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDKCQQRSARKLQ 377

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 378 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRNIKEFLCGEKCLDQLIQRLLQSADEEAITE 437


>gi|319954923|ref|YP_004166190.1| bacterial peptide chain release factor 2 (brf-2) [Cellulophaga
           algicola DSM 14237]
 gi|319423583|gb|ADV50692.1| bacterial peptide chain release factor 2 (bRF-2) [Cellulophaga
           algicola DSM 14237]
          Length = 366

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 91/342 (26%), Positives = 159/342 (46%), Gaps = 11/342 (3%)

Query: 11  DLKNRFAEIE---LRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           D+  +  EIE    +       D   K  E    I      +  Y   +    DL  +I 
Sbjct: 23  DVDAKLIEIENEQEKTLAPDFWDNPQKAQEHMKYIQSKKKWVDDYKTSETLANDLEVLIE 82

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
                +   +  + +       I  LE    +  +  +  D+   I++I AG GG+E+  
Sbjct: 83  FQKEGAITEEEVEKQYTKTLDTIENLE----FKNMLSEEGDELPAIIQITAGAGGTESCD 138

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY  ++  + +K++ L+  + D  G K +   I G   F  +K E+GVHR+ R
Sbjct: 139 WAAMLMRMYMMWSEKKGFKIKELNYQEGDVTGIKTVTLEIDGEFSFGWLKGENGVHRLVR 198

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ + HTS A+V V P   +     I   DI I T R+SG+GGQ+VN  ++ V++
Sbjct: 199 ISPFDSNAKRHTSFASVYVYPLVDDSIEIAINPADIDITTARSSGAGGQNVNKVETKVQL 258

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH P+GI +  S  +SQH+NR  A+K+L+++LY++E ++    R      ++   +   +
Sbjct: 259 THKPSGIQISCSDSRSQHENRATALKMLKSQLYEIELRKKMEARQEIESSKMK-IEWGSQ 317

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR Y     + + D R       ++ V+ G ID  +   L  
Sbjct: 318 IRNYVMHPYKLVKDVRTATETGNVDAVMDGDIDKFLKAFLMM 359


>gi|254785320|ref|YP_003072749.1| peptide chain release factor 2 [Teredinibacter turnerae T7901]
 gi|242667502|gb|ACS93539.1| peptide chain release factor 2 [Teredinibacter turnerae T7901]
          Length = 300

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 102/304 (33%), Positives = 154/304 (50%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I   D    + +DL  +  + N +  + D+      +    +      + +  +   
Sbjct: 2   VETIENLDHGVTDCRDLIDLAVEENDEDSLEDVQ-----SEIDSLEAQLAILEFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +  L+I++G+GG+EA  +   + RMY R+   + +K  +  +S  +  G K    
Sbjct: 57  EMDANNAFLDIQSGSGGTEAQDWAEMILRMYLRWGEDKGFKTTLEEASAGEVAGIKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
              G   F  ++ E+GVHR+ R    ++  R HTS A+V V PE  +         D+R+
Sbjct: 117 RFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEIDDDIEIDINPADLRV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN TDSAVRITH PTGI+V   SE+SQH NR +AMK+LRAR+Y+ E  
Sbjct: 177 DTYRASGAGGQHVNKTDSAVRITHEPTGIVVQCQSERSQHSNRDKAMKMLRARMYEHEIL 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +DD I 
Sbjct: 237 KRNAEKQALEDSKSDIGWG---SQIRSYVLDDQRIKDLRTGIQTSNCQAVLDGKLDDFIE 293

Query: 342 PLLT 345
             L 
Sbjct: 294 ASLK 297


>gi|320103729|ref|YP_004179320.1| peptide chain release factor 2 (bRF-2) [Isosphaera pallida ATCC
           43644]
 gi|319751011|gb|ADV62771.1| bacterial peptide chain release factor 2 (bRF-2) [Isosphaera
           pallida ATCC 43644]
          Length = 334

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 159/329 (48%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     +   +     A I  + + +  Y+   ++ +DL  ++     D    D    E
Sbjct: 1   MNAPDFWNHQDRAKATIAEIKTLNAVLKPYEALVKQAEDLQALVELA--DEAGDDSLDDE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +    ++ RE  ++     +    +D  +  LEI  G GG+EA  +   L RMY  +A  
Sbjct: 59  IDQATQKAREAFDKFELQSMLSGMNDHCNAFLEIHPGEGGTEACDWSEMLLRMYMMWAES 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + +KVE++S  D    G +     ISG   F  +K E+GVHR+ R+   +A+GR  TS A
Sbjct: 119 KGYKVELISREDGGVAGIQSAQLKISGDYAFGYLKGEAGVHRLVRISPFDAAGRRQTSFA 178

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V PE  +       + D++ D  R  G GGQH N T+S VR TH+PTG++  + SE+
Sbjct: 179 SVDVTPEIDDTIEIEIRDCDLKRDVFRCGGPGGQHQNKTESGVRYTHLPTGVVAESRSER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           SQ QN   A+K+L+A+L  +E ++   E  ++ + K +IG G    +IR+Y       + 
Sbjct: 239 SQFQNDDLALKLLKAKLIRLEEEKREAESIKAYDDKSKIGFG---SQIRSYVLQPYTLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R          VL G +D  IN  L  
Sbjct: 296 DLRTGYETGNPRAVLDGDLDGFINAYLRM 324


>gi|241765770|ref|ZP_04763713.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
 gi|241364339|gb|EER59478.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
          Length = 300

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  +    ++  +  +L+ +  +   D       + E   +  EI +LE    +      
Sbjct: 2   VLTLDKLTRELADNAELYEMSKEE-GDEAGLLTIEAETAKLRPEIEQLEFRRMFSNEADP 60

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
            +    C ++I+AG GG+EA  +   L R Y +YA  + +K  V   +  D  G K    
Sbjct: 61  LN----CFVDIQAGAGGTEACDWASMLLRQYLKYAERKGFKTTVEEETAGDVAGIKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   +  ++ E+GVHR+ R    ++SG  HTS A++ V PE  +   +DI   D+R 
Sbjct: 117 KVEGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRT 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQH+N TDSAVR+THIPTGI+V     +SQH NR  A + LR+RLYD E +
Sbjct: 177 DTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHEMR 236

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+    + K  +G G    +IR+Y     RI D R  + +   + VL G +D  I 
Sbjct: 237 KRQEEQQKLEDTKTDVGWG---HQIRSYVLDNSRIKDLRTGVEISATQKVLDGDLDAFIE 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|56707356|ref|YP_169252.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669826|ref|YP_666383.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456424|ref|ZP_03664897.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370940|ref|ZP_04986945.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874190|ref|ZP_05246900.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|54112809|gb|AAV29038.1| NT02FT0149 [synthetic construct]
 gi|56603848|emb|CAG44824.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320159|emb|CAL08207.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569183|gb|EDN34837.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840189|gb|EET18625.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 325

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 103/331 (31%), Positives = 168/331 (50%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +          +     E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETL-------SELLELGEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    + +     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RI D R  +     + VL G +D  I   L 
Sbjct: 292 RIKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|83644616|ref|YP_433051.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396]
 gi|83632659|gb|ABC28626.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396]
          Length = 301

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 102/306 (33%), Positives = 165/306 (53%), Gaps = 12/306 (3%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           ++  +        +  DL  +  +   D++     + E+ +I  ++  LE    +  +  
Sbjct: 2   VVKTVDDVTGGLTDCSDLLDMAVEE-QDADAVTEVETELESIRAQVETLE----FRRMFA 56

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
              D  +  L+I+AG+GG+EA  +   L RMY R+   R +K +++  S  +  G K   
Sbjct: 57  GEMDPNNAYLDIQAGSGGTEAQDWASILLRMYLRWGERRGFKTDLIEESPGEVAGIKSAT 116

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIR 223
               G   +  ++ E+GVHR+ R    ++  R HTS A+V V PE   +I++DI   D+R
Sbjct: 117 IHFQGEYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEVDDDIEIDINPADLR 176

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           ID  RASG+GGQHVN T+SAVRITH+P+GI+    +++SQH+N+ +AMK L+A+LY++E 
Sbjct: 177 IDVYRASGAGGQHVNRTESAVRITHMPSGIVTQCQNDRSQHKNKDQAMKQLKAKLYELEI 236

Query: 283 KRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
           ++   E     + K  IG G    +IR+Y   Q RI D R ++     + VL G ID+ I
Sbjct: 237 QKRNAEAQQLEDSKSDIGWG---SQIRSYVLDQSRIKDLRTSIENSNCQAVLDGDIDEFI 293

Query: 341 NPLLTA 346
              L  
Sbjct: 294 EASLKQ 299


>gi|88706910|ref|ZP_01104609.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
 gi|88698832|gb|EAQ95952.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
          Length = 299

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 103/304 (33%), Positives = 161/304 (52%), Gaps = 12/304 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +S I   D    +  DL  +  + + ++ + +L Q     ++   +     + +  +   
Sbjct: 1   MSSIDALDTGASDTLDLIEMAAEEDDEAAVAELEQEIQGLLKVLEK-----LEFRRMFNG 55

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +  L+I++G+GG+EA  +   L RMY R+   + +  E++ +S  D  G K    
Sbjct: 56  EMDPNNAFLDIQSGSGGTEAQDWAEILLRMYLRWGEAKGFSTELIEASGGDVAGIKSATI 115

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRI 224
             +G   F  ++ E+GVHR+ R    ++  R HTS A+V V       I+++I   D+R+
Sbjct: 116 KFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRV 175

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN TDSAVR+TH P+GI+V   +E+SQHQNR  AMK+LR +LY++E  
Sbjct: 176 DTYRASGAGGQHVNKTDSAVRLTHNPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEIL 235

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E+    + K  IG G    +IR+Y     RI D R N+     + VL G ID  I 
Sbjct: 236 KRNEEKQIMEDNKADIGWG---SQIRSYVLDASRIKDLRTNVETSNTQAVLDGDIDQFIE 292

Query: 342 PLLT 345
             L 
Sbjct: 293 ASLK 296


>gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
 gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
 gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
 gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
 gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1]
 gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
 gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
 gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
 gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
 gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1]
          Length = 332

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 164/332 (49%), Gaps = 16/332 (4%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD---LHTVIGDHNSDSEIRDLA 79
           M++    +   K  +  +  + +  K   + + +   +D      ++ +       +++ 
Sbjct: 1   MAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYEDETTAVELLREEPDPDLQKEVE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                  E       +     LL     D  + ++EI  G GG+EA  +   L RMY+RY
Sbjct: 61  ADLATLQEDF-----HNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +K E+      ++ G K + A I G+  +  +K E+GVHR+ R+   +A+ R HT
Sbjct: 116 CDTAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHT 175

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTS 257
           S A+V V+PE    I +DI  +D+R+D  R+SG+GGQH+N T SAVRITH+PTGI+  + 
Sbjct: 176 SFASVEVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +++SQ QNR  AM  LRA+L+ +E ++   ++ A +  Q  IG G    +IR+Y F    
Sbjct: 236 AQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWG---SQIRSYVFHPYN 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + D R        + V+ G +   I   L  
Sbjct: 293 LVKDLRTGHETADAQGVMDGKLQPFIYSYLQW 324


>gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633]
 gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633]
          Length = 316

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 101/317 (31%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   ++++        +  +L  +      D   +D  +       +  +    
Sbjct: 1   MRERNRLDQSMTEVQEIVADLADTLELAEMAEMEGDDDLYQDATEALKALRARAGK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LEI  G GG+EA  +   L RMY R+A    +KVEV+ +   
Sbjct: 57  -AELQALLSGEADGNDSYLEIHPGAGGTEAQDWASMLARMYTRWAEKSGFKVEVIEAQAG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K I   + G   +  +K E+GVHR+ R+   ++SGR HTS A+V   P     I+
Sbjct: 116 EEAGLKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I  +D+R+DT RASG+GGQH+N TDSAVR+TH PTGI+V   +++SQH+NR  A  +L
Sbjct: 176 IEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTML 235

Query: 274 RARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E ++     +  A  K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYELELQKREEAAQADAESKTDIGWG---HQIRSYVLQPYQMVKDLRTQVETSDTQG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +DD +   L   
Sbjct: 293 VLDGDLDDFMAAALAQR 309


>gi|308233692|ref|ZP_07664429.1| peptide chain release factor 2 [Atopobium vaginae DSM 15829]
 gi|328943371|ref|ZP_08240836.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
 gi|327491340|gb|EGF23114.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
          Length = 375

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 173/352 (49%), Gaps = 16/352 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ---EEQDLHTV 65
           I +L++   ++ ++  E+   +     TE  A +  +  K++ YD   +   + Q    +
Sbjct: 30  INELRSHVDKLTVQAGETTFWNDAAHATEVMAQLGALKEKLNQYDSAYKLLLDVQAAFEL 89

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
               + D E+   A+     +   +  LE          D  D  + I+ I  G GG EA
Sbjct: 90  ADTSSQDDEMLIEAKRLANKLTNVLDNLELN----TWFNDEFDTGAAIVTITPGQGGLEA 145

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   LF+MY  Y   + W V++  +   +  G      T++G+  +  ++ E GVHR+
Sbjct: 146 QDWCDMLFKMYLHYCERKSWTVDINDAPVGEVIGIDRATFTVTGKNAYGMLRAEQGVHRL 205

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+  T+A  R  T+ A V VLP     I+V I  +DIRID   ASG GGQ VNTTDSAV
Sbjct: 206 VRISPTDAKKRRQTTFAGVEVLPVLPQTIEVQIDTQDIRIDVYHASGPGGQGVNTTDSAV 265

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHIPTGI+V   +E+SQ QN+  AM++LR++LY++E++R   E    R  K  I  G+
Sbjct: 266 RITHIPTGIVVTCQNERSQLQNKAAAMQILRSKLYELEKQRREEELDDLRGPKHDISWGN 325

Query: 302 RSERIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAKM 351
              +IR Y  +    + D R  +    ++ VL +G +D  I         + 
Sbjct: 326 ---QIRNYILYPFQLVKDTRTQVETGNVDAVLQEGDLDQFIIAYHRWASERR 374


>gi|15616167|ref|NP_244472.1| peptide chain release factor 2 in translation [Bacillus halodurans
           C-125]
 gi|10176229|dbj|BAB07324.1| peptide chain release factor 2 in translation [Bacillus halodurans
           C-125]
          Length = 288

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 104/290 (35%), Positives = 158/290 (54%), Gaps = 13/290 (4%)

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           + +  +       ++L Q     +++            LL  +  D  + ILE+  G GG
Sbjct: 5   YELCKEETDADLQQELEQGLKGLVKELNE-----FELQLLLNEPYDKNNAILELHPGAGG 59

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +E+  +   L RMY R+A  + +KVE L     D+ G K +   I G   +  +K E GV
Sbjct: 60  TESQDWASMLLRMYTRWAENKGYKVETLDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGV 119

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   ++SGR HTS  +  V+PE    ++++I  ED++IDT R+SG+GGQHVNTTD
Sbjct: 120 HRLVRISPFDSSGRRHTSFVSCEVMPELDDSVEIEISTEDLKIDTYRSSGAGGQHVNTTD 179

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SAVRITH+PT  +V   SE+SQ +NR RAMK+L+A+L  ++ +    E +  R  Q  IG
Sbjct: 180 SAVRITHLPTNTVVTCQSERSQIKNRERAMKMLQAKLLQLKLEEQQKELAEIRGEQKEIG 239

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            G    +IR+Y F     + DHR N+ +     V+ G ID  I+  L  +
Sbjct: 240 WG---SQIRSYVFHPYSMVKDHRTNVEVGNTNAVMDGEIDSFIDAYLRWN 286


>gi|46396627|sp|Q89AC4|RF2_BUCBP RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 182/343 (53%), Gaps = 15/343 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              KNR  EI + +    +        K+ +E   +  ++++I+  D   QE  D+  + 
Sbjct: 29  DIKKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKIDNDVQELIDILNL- 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + N+ + I D    E   IEK I ELE    +L       D  SC ++I++G+GG EA 
Sbjct: 88  ENSNNINSILDNVLYEFKNIEKSIHELEKCSMFL----GKYDYLSCYVDIQSGSGGVEAQ 143

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  +K+K++++  +  +  G K     + G+  F   + E+G+HR+ 
Sbjct: 144 DWASMLLRMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFRTETGIHRLV 203

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R     A  R HTS ++V V P     I+VDI   D++ID  RASG+GGQHVN T+SAVR
Sbjct: 204 RKSPFNAHHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQHVNKTESAVR 263

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV--ERKRMANERSANRKLQIGSGDR 302
           I H+PTGI+V   +++SQH+N+ +AMK L+A+LY+     K+   +   N KL IG G  
Sbjct: 264 IRHLPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENNKLNIGWG-- 321

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +    ++ VL G +D  +   L 
Sbjct: 322 -HQIRSYTLDNSRIKDLRTGVESKNIQSVLDGGLDLFVECSLR 363


>gi|291550769|emb|CBL27031.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           torques L2-14]
          Length = 320

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 96/316 (30%), Positives = 167/316 (52%), Gaps = 5/316 (1%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   +   D+   + +D+  +I     + E ++ A+     +       E  + 
Sbjct: 1   MKELKGLQDSVKEIDKLFTDYEDMLLLIEMSEGEDEEQEAAEEIEEELGTFEEVFEK-LR 59

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              L     D  + I+ + AG GG+EA  + G L+RMY R+A  + ++VE+L   + D  
Sbjct: 60  ISTLLIGPYDADNAIVTLHAGAGGTEAMDWTGMLYRMYSRWAEKKGYEVEMLDYLEGDVA 119

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDI 217
           G K +   + G   +  ++ E GVHR+ R+    A+G+  TS A+  V      +ID++I
Sbjct: 120 GIKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNANGKRQTSFASCDVIPDIEEDIDIEI 179

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +DIR+DT R+SG+GGQH+N T SA+RITH+PTGI+V   +E+SQH N+ +AM++L+++
Sbjct: 180 NDDDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSK 239

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY 335
           LY ++++  A + S  R  ++   +   +IR+Y       + DHR N  +  +  V+ G 
Sbjct: 240 LYVLKQQEQAEKMSDIR-GEVRDINFGNQIRSYVMQPYTLVKDHRTNAEISNVGAVMDGN 298

Query: 336 IDDIINPLLTAHQAKM 351
           ID  IN  L+      
Sbjct: 299 IDPFINAYLSMDAEAQ 314


>gi|333029659|ref|ZP_08457720.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011]
 gi|332740256|gb|EGJ70738.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011]
          Length = 370

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 153/372 (41%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R                  E +LR       D       +   +  I 
Sbjct: 1   MITSEQLKDIKERTLALRRYLDIDSKKIELEEEQLRTQAPDFWDDPKVAQSQMKLVKGIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y+      ++L      +  +    +            I  LE       + +  
Sbjct: 61  DWIKGYENSVALTEELELAFDFYKDELVSEEEVDAAYNKALVCIENLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D   CIL+I +G GG+E+  +   L R+Y R+A    +K  + +  + D+ G K     
Sbjct: 117 ADQLGCILKINSGAGGTESQDWASMLMRLYLRWAEDHNYKATLSNLQEGDEAGIKTCTIQ 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED-IRID 225
           + G   +  +K E+GVHR+ RV    A G+  TS A++ V P   E          I  D
Sbjct: 177 VEGEYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASIFVTPLVDESIEVTIDPSAITWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
             R+ G+GGQ+VN  ++ VR+ +             ++  +  +SQ  NR  AM++LR+ 
Sbjct: 237 LFRSGGAGGQNVNKVETGVRLRYQYKDPDTGQEEEILVENTESRSQLDNRENAMRLLRSI 296

Query: 277 LYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LY+ E ++   E  +  + K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYEKELQKRLAELRKIEDSKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID+ I   L  
Sbjct: 354 DIDEFIKAYLME 365


>gi|7404432|sp|O51101|RF2_BORBU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 359

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  +   A S + +KI  +++   + +DL  +    
Sbjct: 23  NEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIKDLSDLCEIA 82

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +   L        ++    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 83  ENEKDTNGLEIEFNTLEKQYKDLLTI-----SYFKEELDANNAFLTIHSGAGGTEACDWV 137

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 138 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 196

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 197 PFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 256

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +
Sbjct: 257 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---Q 313

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 314 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 355


>gi|150396182|ref|YP_001326649.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
 gi|150027697|gb|ABR59814.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
          Length = 342

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 102/336 (30%), Positives = 164/336 (48%), Gaps = 16/336 (4%)

Query: 20  ELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
             +  +    +      KL  E   +   IS +  ++Q+  +  +L  +  +    + + 
Sbjct: 2   NNKAEDPSLWNDAAEAQKLMRERQQLDDGISGLRRFEQQLNDNIELIELGEEEGDSAIVS 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           +  +          +          +     D     +E+ +G GG+E+  +   L RMY
Sbjct: 62  EAEEALRQLRNDAAK-----KQVEAMLSGEADQNDTYVEVHSGAGGTESQDWANMLLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  + +KVE++   D ++ G K     + G   +  +K ESGVHR+ R+   +++ R
Sbjct: 117 TRWAERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNAR 176

Query: 197 VHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS +++ V P   E   VDI   D RIDT R+SG+GGQHVNTTDSAVRITH+P+GI+V
Sbjct: 177 RHTSFSSIWVYPVVDESIQVDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVV 236

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFS 312
               E+SQH+NR +A  +LRARLY+ E K+   A    A  K +IG G    +IR+Y   
Sbjct: 237 QCQQERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWG---HQIRSYVLQ 293

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + + D R  +       VL G + + +   L   
Sbjct: 294 PYQLVKDLRTGVESTSPGDVLDGELSEFMEAALAHR 329


>gi|58336996|ref|YP_193581.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
 gi|227903556|ref|ZP_04021361.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
           4796]
 gi|58254313|gb|AAV42550.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
 gi|227868443|gb|EEJ75864.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
           4796]
          Length = 332

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 98/329 (29%), Positives = 159/329 (48%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    D   K  +  +  + +  K   + +  ++ +  + +        E     Q E
Sbjct: 1   MAQPDFWDNQEKAQKLISENNVLKEKRDSFLKLSEDYE--NELTALDLLREEPDSDLQTE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V      ++E  +     LL     D  + + EI  G GG+EA  +   L RMY+RY   
Sbjct: 59  VETDLIALQEAFHNYELDLLLSGKYDSHNALFEIHPGAGGTEAMDWGQMLLRMYQRYCDT 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +K E+      ++ G K + A + G   +  +K E+GVHR+ R+   +++ R HTS A
Sbjct: 119 AGFKFEINDYEPGEEAGVKSVTARVVGHNAYGMLKSENGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
           +V V+PE  +         D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ QNR  AM  LRA+L+ +E ++   ++ A +  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWG---SQIRSYVFHPYNLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R          V+ G +   I   L  
Sbjct: 296 DLRTGYETADTTGVMDGKLQPFIYSYLQW 324


>gi|325474491|gb|EGC77678.1| peptide chain release factor 2 [Treponema denticola F0402]
          Length = 320

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 110/313 (35%), Positives = 165/313 (52%), Gaps = 15/313 (4%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIG--DHNSDSEIRDLAQIEVLAIEKEIRELENE 96
              I  + ++I  + +   E  DL  ++   + + + E+ +       ++ ++ ++L   
Sbjct: 1   MGEIKALKNRIYPWQELMDEVSDLEVLMELSEESGNEELSEEIGSNYNSVYEKYKKLSI- 59

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
              L L     D     L + AG GG+EA  + G L RMY R+   R +K E +   + +
Sbjct: 60  ---LSLLSGEVDKNDAYLTVHAGAGGTEACDWAGMLVRMYLRWCESRGFKTETIDVVEAE 116

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDV 215
            GG K     ISG   F  +K E+G+HR+ R+   +++GR HTS  +V   P     I+V
Sbjct: 117 -GGIKSATFQISGEFAFGLLKSETGIHRLVRISPFDSNGRRHTSFTSVFAFPVLDDTIEV 175

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           DI  ED+RIDT RA G+GGQHVN TDSAVRITHIPTGI+V   +++SQ  NR  AM VL+
Sbjct: 176 DIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQTQRSQISNRATAMNVLK 235

Query: 275 ARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYV 331
           +RLY+   ++   E    A  K  I  G+   +IR+Y F     + DHR       ++ V
Sbjct: 236 SRLYNYYEEQKEKENMKFAAEKKGISWGN---QIRSYVFQPYTMVKDHRTKYETGNIQAV 292

Query: 332 LQGYIDDIINPLL 344
           + G ID+ IN  L
Sbjct: 293 MDGDIDEFINSFL 305


>gi|89257152|ref|YP_514514.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315491|ref|YP_764214.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503377|ref|YP_001429442.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254368376|ref|ZP_04984394.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica 257]
 gi|254368387|ref|ZP_04984404.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|89144983|emb|CAJ80343.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130390|gb|ABI83577.1| peptide chain release factor B [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254184|gb|EBA53278.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253980|gb|ABU62486.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121281|gb|EDO65482.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 325

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +          +     E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETL-------SELLELGEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    + +     ++ +  +     D     L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQNVASEIEKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RI D R  +     + VL G +D  I   L 
Sbjct: 292 RIKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|332525328|ref|ZP_08401493.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
 gi|332108602|gb|EGJ09826.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
          Length = 248

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 92/249 (36%), Positives = 143/249 (57%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +  +  D  +C ++I+AG GG+EA  +   L R Y +Y   + +K EV+  ++ D  G +
Sbjct: 1   MFANPADPSNCFIDIQAGAGGTEACDWASMLLRQYLKYCEKKGFKAEVMEETEGDVAGIR 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E+GVHR+ R    +++G  HTS A++ V PE  +  +++I   
Sbjct: 61  SATLKIEGDYAFGHLRTETGVHRLVRKSPFDSAGGRHTSFASLFVYPEVDDSIEIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R DT RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH+NR  A  +LR+RLY+
Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWAMLRSRLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++    +    + K  +G G    +IR+Y   Q RI D R  + +   + VL G +D
Sbjct: 181 HEMRKQMEAQQKLEDSKTDVGWG---HQIRSYVLDQSRIKDLRTGVEISNTQKVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L  
Sbjct: 238 PFIEASLKQ 246


>gi|134302701|ref|YP_001122669.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050478|gb|ABO47549.1| Peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 327

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 168/333 (50%), Gaps = 19/333 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +          +     E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETL-------SELLELGEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    + +     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAV---LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           TS A+V +   + +  +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V
Sbjct: 175 TSFASVFISPEVDDDIDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVV 234

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFS 312
            + S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   
Sbjct: 235 QSQSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLD 291

Query: 313 QGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           Q RI D R  +     + VL G +D  I   L 
Sbjct: 292 QSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 324


>gi|116629958|ref|YP_815130.1| protein chain release factor B [Lactobacillus gasseri ATCC 33323]
 gi|238854078|ref|ZP_04644428.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4]
 gi|282851440|ref|ZP_06260805.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1]
 gi|311110410|ref|ZP_07711807.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22]
 gi|116095540|gb|ABJ60692.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           gasseri ATCC 33323]
 gi|238833312|gb|EEQ25599.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4]
 gi|282557408|gb|EFB63005.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1]
 gi|311065564|gb|EFQ45904.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22]
          Length = 332

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 104/327 (31%), Positives = 168/327 (51%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D   +        + +  K   + + +++ +D  T +    +D +     ++ 
Sbjct: 1   MAEPGFWDDQEQAQSLINETNRMKEKSENFKRLEEKFEDAQTALELLKADPDPELSEELS 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                       ++    LL  D  D  + ++EI  G GG+EA  +   L RMY+RYAA 
Sbjct: 61  KEMFSLSQSF--HDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAAN 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
              K E+      ++ G K +   I G+  F  +K E+GVHR+ R+   +++ R HTS A
Sbjct: 119 HNLKFEIEDYEPGEEAGVKSVSVRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE  +  +VDI  +D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QNR  AM +LRA+L+ +E ++   +    +  Q   G    +IR+Y F     + DH
Sbjct: 239 SQLQNRETAMNMLRAKLFQLEEEKKKKQTEELKGNQKEIG-FGSQIRSYVFHPYNMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R N     +  V+ G +DD I   L  
Sbjct: 298 RTNFETSDVNGVMDGKLDDFIYAYLQW 324


>gi|224543374|ref|ZP_03683913.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523701|gb|EEF92806.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
           15897]
          Length = 371

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 170/346 (49%), Gaps = 6/346 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  LK     + ++  +    D     T+ YA ++ +          +   ++L  V   
Sbjct: 26  IEVLKREIEGLTVQTMDEHFWDDQAHATKVYAHLNEMKKVADTDASLEASYKELMEVYEY 85

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                +   +A +E   +       E      LL     D  + I+EI  G GG+E+  +
Sbjct: 86  VKDTEDPDFMASLEEDYMTFHKNLDE--FEKTLLFDQEYDHSNAIVEIHPGAGGTESQDW 143

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RY   + WKV+V      D+ G K      +G   +  ++ E GVHR+ R+
Sbjct: 144 AEMLMRMYIRYGEKKGWKVDVDDYLAGDEAGLKSCSIRFTGYNAYGHLRAEKGVHRLVRI 203

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++S R HTS A+V V PE   +I++ I  +++RIDT RASG+GGQH+N TDSAVRIT
Sbjct: 204 SPFDSSKRRHTSFASVEVSPELDDDIEITIDPKNLRIDTYRASGAGGQHINKTDSAVRIT 263

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPT  +V   S++SQ QNR +AM +L+++LY + ++  A + S   + +  + +   +I
Sbjct: 264 HIPTNTVVSCQSQRSQLQNREQAMLMLKSKLYLLMQEEHAEKLSEI-QGEKKNIEWGSQI 322

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R+Y       + D+R        + +L G +DD+I   L +   + 
Sbjct: 323 RSYVLHPYSMVKDNRSGYESNDQKKILDGELDDLIYAYLRSQVKEK 368


>gi|149409336|ref|XP_001510216.1| PREDICTED: similar to low density lipoprotein receptor-related
           protein 10 [Ornithorhynchus anatinus]
          Length = 380

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 140/293 (47%), Positives = 195/293 (66%), Gaps = 3/293 (1%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +  H+ D E+R LA+ E++  +KEI EL  +I +LL+P +  D+   ILE+ AG GG EA
Sbjct: 83  LLMHDEDEELRKLAESEIITCQKEIAELNRQIVFLLIPSEEADENDLILELTAGIGGQEA 142

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            LF  ++F MYE+YAA +KW  E L    ++ GG +   A+I G   +  +KFE GVHRV
Sbjct: 143 MLFTAEMFDMYEQYAAYKKWHFETLEYFPSEIGGLRHATASIGGHEAYKHLKFEGGVHRV 202

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE  GR HTS  TVAVLP+  EI++ I  +D+RI+T RASG+GGQHVNTTDSAVR
Sbjct: 203 QRVPKTERQGRTHTSTMTVAVLPQPTEINLVIHPKDLRIETKRASGAGGQHVNTTDSAVR 262

Query: 246 ITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTGI      E+SQ +NR  AMK LRA+LY ++ +   ++R + RK+QIG+  RSE
Sbjct: 263 IVHVPTGIASECQQERSQLKNREMAMKKLRAKLYSIQLEEETSKRYSARKIQIGTKGRSE 322

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSA 355
           +IRTYNFSQ R+TDHRI+ + + +E  + G   +D++I+ L      + +   
Sbjct: 323 KIRTYNFSQDRVTDHRISKSFHDIESFMLGERLLDELIHSLKEYSDYEALAEM 375


>gi|67969776|dbj|BAE01236.1| unnamed protein product [Macaca fascicularis]
          Length = 378

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 130/363 (35%), Positives = 209/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 9   QKYMENLNKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 68

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I+++I  L NE+   LLPK+  D    ILE+ +G  T
Sbjct: 69  MCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLLPKEKYDKNDVILEVTSGRTT 128

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 129 GGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 188

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 189 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHV 248

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTT SAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 249 NTTVSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKCQQQSARKLQ 308

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R++DHRI   +  ++  L G   +D +I  LL +   + +  
Sbjct: 309 VGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAVVE 368

Query: 355 ASE 357
             +
Sbjct: 369 LLD 371


>gi|212637017|ref|YP_002313542.1| peptide chain release factor 2 [Shewanella piezotolerans WP3]
 gi|212558501|gb|ACJ30955.1| Peptide chain release factor 2 [Shewanella piezotolerans WP3]
          Length = 293

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 96/297 (32%), Positives = 157/297 (52%), Gaps = 12/297 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           D   ++ + L  +  + + +    D +       ++        + +  +     D   C
Sbjct: 2   DSGLEDIEGLLELAVEEDDEETFNDASAELDDLEKRLEE-----LEFRRMFSGPHDAADC 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            L+I++G+GG+EA  +   + RM+ R+     +K E++  +D D  G K      +G   
Sbjct: 57  YLDIQSGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASG 231
           F  ++ E+GVHR+ R    ++SG+ HTS  +V V PE  +  ++DI   D+RIDT RASG
Sbjct: 117 FGSLRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE--RKRMANE 288
           +GGQHVN T+SA+RITH+PT  +V   +++SQH+NR  AMK L+A+LY++E  R+    +
Sbjct: 177 AGGQHVNKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLRQNADKQ 236

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 237 AAEDAKSDIGWG---SQIRSYVLDDARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1]
 gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium
           sp. BTAi1]
          Length = 323

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 98/317 (30%), Positives = 162/317 (51%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   ++ I   ++   +  ++  +    N    + +         +   R    
Sbjct: 1   MQERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A    +K+E L  +  
Sbjct: 57  -RELEALLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS ++VA+ P     I 
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+   + +A++  K +IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEKAAADQAAKTEIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTAG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMAATLAQR 309


>gi|241667458|ref|ZP_04755036.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876005|ref|ZP_05248715.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842026|gb|EET20440.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 325

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 102/331 (30%), Positives = 169/331 (51%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L  +   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     + G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RI D R  +     + VL G +D  I   L 
Sbjct: 292 RIKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 342

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 104/336 (30%), Positives = 167/336 (49%), Gaps = 16/336 (4%)

Query: 20  ELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
             +  +    +      KL  E   +   I+ +   +Q+  +  +L  +  +    S ++
Sbjct: 2   NNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVK 61

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           +          +  R          +     D     LE+ +G GG+E+  +   L RMY
Sbjct: 62  EAEDTLKALKAEAAR-----RQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMY 116

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  +++KVE+L   D ++ G K     + G   +  +K ESGVHR+ R+   +++ R
Sbjct: 117 TRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNAR 176

Query: 197 VHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS +++ V P     I ++I   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V
Sbjct: 177 RHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVV 236

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFS 312
               E+SQH+NR +A  +LRAR+Y+ E K+   A    A  K +IG G    +IR+Y   
Sbjct: 237 QCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWG---HQIRSYVLQ 293

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             + + D R  +     + VL G +++ +   L   
Sbjct: 294 PYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALAHR 329


>gi|157960584|ref|YP_001500618.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345]
 gi|157845584|gb|ABV86083.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345]
          Length = 293

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 12/297 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           D   ++ + L  +  + N +    D A       ++        + +  +     D   C
Sbjct: 2   DSGLEDIEGLLELAVEENDEETFNDAAAELQGLEKRLEE-----LEFRRMFSKPHDASDC 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            L+I++G+GG+EA  +   + RM+ R+     +K E++  +  D  G K      +G   
Sbjct: 57  YLDIQSGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTAGDVAGIKGATIKFTGEYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASG 231
           F  ++ E+GVHR+ R    ++SG+ HTS  +V V PE  +  ++DI   D+RIDT RASG
Sbjct: 117 FGSLRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANE 288
           +GGQHVN T+SA+RITH+PT  +V   +++SQH+NR  AMK L+A+LY++E   +    +
Sbjct: 177 AGGQHVNKTESAIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQ 236

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 237 AAEDAKSDIGWG---SQIRSYVLDDARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|328676241|gb|AEB27111.1| Peptide chain release factor 2 [Francisella cf. novicida Fx1]
          Length = 325

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 103/331 (31%), Positives = 170/331 (51%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETL-------SELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    + +     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V + SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADGHGFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RI D R  +     + VL G +D  I   L 
Sbjct: 292 RIKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|219685347|ref|ZP_03540166.1| peptide chain release factor 2 [Borrelia garinii Far04]
 gi|219673120|gb|EED30140.1| peptide chain release factor 2 [Borrelia garinii Far04]
          Length = 350

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 180/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  E   A S + +KI  +++   + +DL  +    
Sbjct: 14  KEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDLCEII 73

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +I  L     +  ++    L          K+  D  S  L I +G GG+EA  +V
Sbjct: 74  ENEKDINSLEIEFNVLEKQYKDLLTI-----SYFKEELDINSAFLTIHSGAGGTEACDWV 128

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 129 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 187

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 188 PFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 247

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  + +  K +I  G+   +
Sbjct: 248 IETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQELKKEISWGN---Q 304

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 305 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 346


>gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 376

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 165/346 (47%), Gaps = 16/346 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R   +  +  +    +      KL  E   +   IS +   +Q+  +        
Sbjct: 26  DQAIRRLDWLNNKAEDPNLWNDSTEAQKLMRERQQLDDGISGVKQLEQQLNDNI-----E 80

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                + E  +    E     K ++          +     D     LE+ +G GG+E+ 
Sbjct: 81  LIELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQ 140

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  +++KVE+L   D ++ G K     + G   +  +K ESGVHR+ 
Sbjct: 141 DWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLV 200

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS +++ V P     I ++I   D RIDT R+SG+GGQHVNTTDSAVR
Sbjct: 201 RISPYDSNARRHTSFSSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQHVNTTDSAVR 260

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGDR 302
           ITH+PTGI+V    E+SQH+NR +A  +LRAR+Y+ E K+   A    A  K  IG G  
Sbjct: 261 ITHMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTDIGWG-- 318

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             +IR+Y     + + D R  +     + VL G +++ +   L   
Sbjct: 319 -HQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALAHR 363


>gi|208780604|ref|ZP_03247943.1| peptide chain release factor 2 [Francisella novicida FTG]
 gi|254373627|ref|ZP_04989111.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
 gi|151571349|gb|EDN37003.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
 gi|208743579|gb|EDZ89884.1| peptide chain release factor 2 [Francisella novicida FTG]
          Length = 325

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 103/331 (31%), Positives = 169/331 (51%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +          +     E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETL-------SELLELGEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    + +     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V + SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADGHGFKVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RI D R  +     + VL G +D  I   L 
Sbjct: 292 RIKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|218890021|ref|YP_002438885.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           LESB58]
 gi|218770244|emb|CAW26009.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           LESB58]
          Length = 303

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 12/307 (3%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            ++  +        + +DL  +  + + +  + D+A       E   +     + +  + 
Sbjct: 3   QVVETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEK-----LEFRRMF 57

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
               D  +  L+I+AG+GG+EA  +   L RMY R+A    +   ++  S+ +  G K  
Sbjct: 58  SGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGA 117

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDI 222
              I G   F  ++ E GVHR+ R    ++  R HTS   V V PE  +  +++I   D+
Sbjct: 118 TVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADL 177

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
           RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA+LY++E
Sbjct: 178 RIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELE 237

Query: 282 RKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
            ++   A++   + K  IG G    +IR+Y   Q RI D R  +     + VL G +D+ 
Sbjct: 238 MQKRTAASQALEDSKSDIGWG---HQIRSYVLDQSRIKDLRTGIERSDCDKVLDGDLDEY 294

Query: 340 INPLLTA 346
           +   L  
Sbjct: 295 LEASLKQ 301


>gi|313207347|ref|YP_004046524.1| bacterial peptide chain release factor 2 (brf-2) [Riemerella
           anatipestifer DSM 15868]
 gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella
           anatipestifer DSM 15868]
 gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM]
 gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD]
          Length = 376

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 96/345 (27%), Positives = 168/345 (48%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           QI   K      + + +     D   +       +      +  Y++     +DL  +I 
Sbjct: 28  QIDKKKLEITNDDEKTAAPEFWDNPKEAEVFLKQLRSKKKWVEDYEEIHTGLEDLQVLIE 87

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D +     +     + +++  LE    +  +  +  D+ S +L+I AG GG+E+  
Sbjct: 88  FAKEDPDSAQELETAYPTLLEKVENLE----FKNMLSNEGDELSAVLQITAGAGGTESCD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY  +A    +KV+ L+  + D  G K +   I G   F  +K E+GVHR+ R
Sbjct: 144 WASMLMRMYLMWADKNGYKVKELNFQEGDVAGVKTVTLEIEGEYAFGYLKGENGVHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ + HTS A+V V P     I+++I   DI  +TMRASG+GGQ+VN  ++AVR+
Sbjct: 204 ISPFDSNAKRHTSFASVYVYPLVDDSIEININPADISFETMRASGAGGQNVNKVETAVRL 263

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
            H PTGI++  S  +SQ QN+ +A+++L++RLY++E +     R+     K++I  G   
Sbjct: 264 RHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMRARNEIEANKMKIEWG--- 320

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR Y     + + D R       ++ V+ G I   +   L A 
Sbjct: 321 SQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYLMAD 365


>gi|291393031|ref|XP_002713016.1| PREDICTED: mitochondrial translational release factor 1
           [Oryctolagus cuniculus]
          Length = 446

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 132/363 (36%), Positives = 210/363 (57%), Gaps = 11/363 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +      D   K LT  +A ++P+ +      + +Q  ++L +
Sbjct: 77  QKYMEDLHKEYQTLDECLQRISVNDGGRKSLTRRHAELAPLAAIYQEILEAQQAIEELES 136

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + +++ LA  E   I++++  L +E+   L+PK+  D    ILE+ +G  T
Sbjct: 137 MCKSLNTQDEKQLQALALEERQTIDEKLNMLYSELFQNLVPKEKYDKNDVILEVISGRTT 196

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + WK E+L+ +  + GG     A ISG  V+  +K+E 
Sbjct: 197 GGDICQQFTREIFDMYQNYSCYKHWKFELLNYTPAEYGGLHHAAARISGDSVYKHLKYEG 256

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHV 316

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A+ VLRARLY    ++   ++ + RKLQ
Sbjct: 317 NTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALHVLRARLYQQIIEKDKCQQQSARKLQ 376

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI+  +  ++  L G   +D +I  LL +   + I  
Sbjct: 377 VGTRAQSERIRTYNFTQDRVTDHRISYEVRDIKEFLCGEKCLDQLIQRLLQSADEEAIIE 436

Query: 355 ASE 357
             +
Sbjct: 437 ILD 439


>gi|332299528|ref|YP_004441449.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176591|gb|AEE12281.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 373

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/372 (26%), Positives = 163/372 (43%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ +L  R                  E ELR       D   +  ++   +  I 
Sbjct: 1   MITQDQLAELLERTKALGRYLDIDQRRVQLEEEELRTQAPDFWDDVPRAQQQMRRVGEIR 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           S I  ++      Q++      +  ++              K + +LE            
Sbjct: 61  SWIEAFEAVDAATQEVALAYDFYKEEAIEEQDVDDAYARAIKLVEDLELRNM----LSAE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I AG GG+E+  +   L RMY+R+A    +KV + +  D DD G K +   
Sbjct: 117 EDRLGAVLKINAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDGDDAGIKTVTMQ 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V+P     I+V++    +  D
Sbjct: 177 IEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEVEVNPGLLSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  ++ VR+ +  T          ++  +  +SQ  NR  A+++LR++
Sbjct: 237 TFRSSGAGGQNVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDNRENALRLLRSQ 296

Query: 277 LYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +R    +S     K +I  G    +IR+Y F   R+ DHR       +  V+ G
Sbjct: 297 LYDKELERRRAAQSEVEANKKKIEWG---SQIRSYVFDDRRVKDHRTGYQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            +D  I   L  
Sbjct: 354 DLDAFIKAYLMQ 365


>gi|302759761|ref|XP_002963303.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
 gi|300168571|gb|EFJ35174.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
          Length = 391

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 142/356 (39%), Positives = 208/356 (58%), Gaps = 31/356 (8%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           ++ +  K++  +++R A +   + E     +  IK+ +E   +   +  I     K++E 
Sbjct: 47  ILRILEKRMISIEDRHACLSEALLEPGIASEKLIKMNKELRNLDYSVDMIKALRAKEKEV 106

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  ++ +   D E+R LA  E+    +E+R+ ++++   L+PKD           R+ 
Sbjct: 107 IGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEA--------ARSR 158

Query: 120 TGGSEAALFVGDLFRMYER------YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
            G       + D+F +  R      YAA   W+ EVLS +  D  GYKE  A ISG GV+
Sbjct: 159 AGKCSLMCLMFDMFHLIFRSWRYDKYAANNSWRFEVLSITTTDTRGYKEASAAISGDGVY 218

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
             +KFESGVHRVQRVP TE +GR+HTS A+VA+LPEA E+DV+I  ++I+IDT RA G+G
Sbjct: 219 GALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANEVDVEIRNDEIKIDTYRAGGAG 278

Query: 234 GQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           GQHVNTT SAVR+TH PTGI+V   +                RLY++ER R A  RS  R
Sbjct: 279 GQHVNTTCSAVRVTHAPTGIVVAIQDT---------------RLYELERSRAAASRSELR 323

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQ 348
           + QIGS DRSERIRTYNF QGR+TDHR+ +T + +E +++G  ++  +N L   H+
Sbjct: 324 QDQIGSSDRSERIRTYNFPQGRVTDHRVGVTQHAIEQIMEGIGLEIFVNALKMQHE 379


>gi|161615988|ref|YP_001589953.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|213425820|ref|ZP_03358570.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213646961|ref|ZP_03377014.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|238909840|ref|ZP_04653677.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289823819|ref|ZP_06543431.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|16421591|gb|AAL21916.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161365352|gb|ABX69120.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|261248173|emb|CBG26009.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301159597|emb|CBW19116.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914062|dbj|BAJ38036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087470|emb|CBY97235.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225716|gb|EFX50770.1| Peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613439|gb|EFY10380.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621031|gb|EFY17889.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624095|gb|EFY20929.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628166|gb|EFY24955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633285|gb|EFY30027.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636137|gb|EFY32845.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322639476|gb|EFY36164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647592|gb|EFY44081.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648776|gb|EFY45223.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653831|gb|EFY50157.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657937|gb|EFY54205.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664040|gb|EFY60239.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668949|gb|EFY65100.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673057|gb|EFY69164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677952|gb|EFY74015.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681128|gb|EFY77161.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687942|gb|EFY83909.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323194862|gb|EFZ80049.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196613|gb|EFZ81761.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202687|gb|EFZ87727.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207826|gb|EFZ92772.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212622|gb|EFZ97439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214895|gb|EFZ99643.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222626|gb|EGA06991.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225095|gb|EGA09347.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230617|gb|EGA14735.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235032|gb|EGA19118.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239071|gb|EGA23121.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244571|gb|EGA28577.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247186|gb|EGA31152.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253331|gb|EGA37160.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256362|gb|EGA40098.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262462|gb|EGA46018.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267442|gb|EGA50926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269154|gb|EGA52609.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326624786|gb|EGE31131.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332989908|gb|AEF08891.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 293

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 102/297 (34%), Positives = 156/297 (52%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q   +   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K EV+  S+ +  G K     ISG   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ A
Sbjct: 178 GGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 292 NR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDTKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|91784239|ref|YP_559445.1| peptide chain release factor 2 [Burkholderia xenovorans LB400]
 gi|91688193|gb|ABE31393.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           xenovorans LB400]
          Length = 280

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 101/278 (36%), Positives = 155/278 (55%), Gaps = 7/278 (2%)

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E  +   +   +  + I +   ++ +  +  +  D  +  L+I+AG GG+EA  +   L
Sbjct: 4   EEGDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWAAML 63

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            R Y RY   + +K EVL  +D D  G K     I G   +  ++ E+GVHR+ R    +
Sbjct: 64  LRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFD 123

Query: 193 ASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +SG  HTS ++V V PE  +  +VDI   D+RIDT RASG+GGQH+N TDSAVRITH+P+
Sbjct: 124 SSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHLPS 183

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRT 308
           GI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G    +IR+
Sbjct: 184 GIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWG---HQIRS 240

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 241 YVLDNSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 278


>gi|170723283|ref|YP_001750971.1| peptide chain release factor 2 [Pseudomonas putida W619]
 gi|169761286|gb|ACA74602.1| peptide chain release factor 2 [Pseudomonas putida W619]
          Length = 304

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 103/309 (33%), Positives = 161/309 (52%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++ ++  +        + QDL  +  + N +S + D+         + + E   ++ +  
Sbjct: 2   LAQVVETLDKMSGGLADCQDLLDMAVEENDESAVSDVVTE-----LQGLEEKLAQLEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S+ +  G K
Sbjct: 57  MFSGEMDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  ++DI   
Sbjct: 117 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPS 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA+LY+
Sbjct: 177 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 236

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++     +   + K  IG G    +IR+Y     RI D R  +       VL G ID
Sbjct: 237 LEMQKRNAASQALEDSKSDIGWG---HQIRSYVLDDSRIKDLRTGVERSDCNKVLDGDID 293

Query: 338 DIINPLLTA 346
             +   L  
Sbjct: 294 QYLEASLKQ 302


>gi|88856358|ref|ZP_01131017.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
 gi|88814442|gb|EAR24305.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
          Length = 368

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 166/342 (48%), Gaps = 7/342 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             L +  A +          D   K  +  + +S   ++++  +       DL  ++   
Sbjct: 27  DRLTSEIARLSEAAGAPDLWDDTDKAQKVTSDLSHRQAELAKINSISNRLDDLEIMVQLA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           N +S+ +  A     A    I++   ++    L     D +  ++ IRAG GG +AA F 
Sbjct: 87  NEESDAQAGADAR--AELTGIKKTLGDLEVQTLLNGEFDQRPAVITIRAGAGGVDAADFA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY RYA    +   VL +S  ++ G K     +     F  +  E+G HR+ R+ 
Sbjct: 145 EMLLRMYLRYAEQHSYPTRVLDTSYAEEAGIKSATFEVDAPFAFGTLSVEAGTHRLVRMS 204

Query: 190 ATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
              ++G+  TS A V V+P     D V++P  DIR+D  R+SG GGQ VNTTDSAVRITH
Sbjct: 205 PFNSAGKRQTSFAAVEVVPLIETTDVVEVPENDIRVDVFRSSGPGGQSVNTTDSAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +EKSQ QNR  AM+VL++RL  ++R++ A  +       + +    +++R
Sbjct: 265 LPTGIVVSCQNEKSQIQNRAAAMRVLQSRLLLLQREQEAATKKEI--AGVITASWGDQMR 322

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           +Y  +  + + D R    +     V  G +D  I+  +   +
Sbjct: 323 SYVLAPYQMVKDLRTEFEVNNPSNVFDGDLDGFISAGIKWRK 364


>gi|255530197|ref|YP_003090569.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366]
 gi|255343181|gb|ACU02507.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366]
          Length = 357

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 94/363 (25%), Positives = 170/363 (46%), Gaps = 27/363 (7%)

Query: 4   LSHKQICDLKNR------FAEIELRMSE----------SPSVDAYIKLTEEYAAISPIIS 47
           ++ +QI DL++R      + ++E R+ +              D   K  +  A I+    
Sbjct: 1   MTKEQIQDLRDRVASLRRYLDVENRLEDIRIEQELTLQPNFWDDPKKAEQHIAEINSKKV 60

Query: 48  KISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
               + Q     +D   +     S     +  Q +  A  K I +LE       + K  +
Sbjct: 61  WTDAWQQANSLLEDTLVLFDFLQSGDATEEEMQEQYDACLKAIEDLEL----KNMLKSKE 116

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D    +++I AG GG+E+  +   L RMY  +     +K+      + +  G K +    
Sbjct: 117 DQLPAVMQITAGAGGTESCDWAYMLMRMYMMWGEKNGYKITEQDYQEGEIAGVKSVTLQF 176

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDT 226
           SG   +  +K E+GVHR+ R+   +++ R HTS A+V V P     I++++   +I  +T
Sbjct: 177 SGDFAYGYLKGENGVHRLVRISPFDSNARRHTSFASVYVYPLVDDTIEIEVKDSEIEFET 236

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            R+ G+GGQ+VN  ++AVR+ H P+GI++     +SQ QN+  A+++L+++LY+ E ++ 
Sbjct: 237 FRSGGAGGQNVNKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKSQLYEAEMRKR 296

Query: 286 ANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPL 343
               +     K +I  G    +IR+Y     R+ DHR N      + VL G ++D +   
Sbjct: 297 MEATALIEGNKKKIEWG---SQIRSYVLDDRRVKDHRTNFQSSNPQAVLDGELNDFLKAY 353

Query: 344 LTA 346
           L  
Sbjct: 354 LME 356


>gi|254372144|ref|ZP_04987636.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569874|gb|EDN35528.1| peptide chain release factor 2 [Francisella novicida GA99-3549]
          Length = 325

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 103/331 (31%), Positives = 169/331 (51%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +          +     E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETL-------NELLELGEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    + +     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V + SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADGHGFKVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RI D R  +     + VL G +D  I   L 
Sbjct: 292 RIKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|325264746|ref|ZP_08131475.1| peptide chain release factor 2 [Clostridium sp. D5]
 gi|324030038|gb|EGB91324.1| peptide chain release factor 2 [Clostridium sp. D5]
          Length = 310

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 100/311 (32%), Positives = 166/311 (53%), Gaps = 6/311 (1%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   +   +Q   + +D+  +I     + +   +  IE      E    E  I 
Sbjct: 1   MQHLKALQESVKQIEQLYADHEDIGLLIEMSEEEPDDETIGGIEEELDRFEEEFEELRIQ 60

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
            L       D  S I+ + AG GG+E+  +   L+RMY R+A  + + +EVL   D D  
Sbjct: 61  TL--LTGEYDSSSAIVTLHAGAGGTESCDWANMLYRMYSRWAEKKGFSLEVLDYLDGDVA 118

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDI 217
           G K +   + G   +  ++ E GVHR+ R+    A+G+  TS A+  V+P+    ID++I
Sbjct: 119 GIKGVTFEVEGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEDNIDIEI 178

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             E++RIDT R+ G+GGQHVN T SAVRITH+PTGI+V   +E+SQH N+ +AM++L+A+
Sbjct: 179 NEEELRIDTYRSGGAGGQHVNKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKAK 238

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY 335
           LY ++++  A++ S  R  ++       +IR+Y       + DHR N+ +  +  V+ G 
Sbjct: 239 LYLLKQQEQADKVSGIR-GEVKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVMDGN 297

Query: 336 IDDIINPLLTA 346
           +D  IN  L+ 
Sbjct: 298 LDPFINAYLSM 308


>gi|219684785|ref|ZP_03539727.1| peptide chain release factor 2 [Borrelia garinii PBr]
 gi|219671730|gb|EED28785.1| peptide chain release factor 2 [Borrelia garinii PBr]
          Length = 350

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 180/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  E   A S + +KI  +++   + +DL  +    
Sbjct: 14  KEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDLCEIV 73

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +I  L     +  ++    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 74  ENEKDINSLEIEFNVLEKQYKDLLTI-----SYFKEELDINNAFLTIHSGAGGTEACDWV 128

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 129 TMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 187

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 188 PFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 247

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  + +  K +I  G+   +
Sbjct: 248 IETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQELKKEISWGN---Q 304

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 305 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 346


>gi|283835350|ref|ZP_06355091.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220]
 gi|291068515|gb|EFE06624.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220]
          Length = 293

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/297 (32%), Positives = 158/297 (53%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A    + +   ++ +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAV-----AELDTLEDKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   I+G   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+  
Sbjct: 178 GGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|91226783|ref|ZP_01261436.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01]
 gi|269964522|ref|ZP_06178762.1| peptide chain release factor 2 [Vibrio alginolyticus 40B]
 gi|91188914|gb|EAS75198.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01]
 gi|269830759|gb|EEZ84978.1| peptide chain release factor 2 [Vibrio alginolyticus 40B]
          Length = 289

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 103/293 (35%), Positives = 160/293 (54%), Gaps = 12/293 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++ + L  +  +             E+     E+ E   ++ +  +     D   C +++
Sbjct: 2   EDVEGLLELAVEEEDQE-----TFDEIEPELAELEEKLEKLEFRRMFSGDHDSSDCYIDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K EV+  S+ +  G K     ISG   +  +
Sbjct: 57  QAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLKSATVRISGEYAYGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS A+  + PE  E  D+DI   D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPSDLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR- 293
           HVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L+++E ++   E+ AN  
Sbjct: 177 HVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANED 236

Query: 294 -KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 237 AKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 286


>gi|62181551|ref|YP_217968.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|205353965|ref|YP_002227766.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858304|ref|YP_002244955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224584830|ref|YP_002638628.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|62129184|gb|AAX66887.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|205273746|emb|CAR38741.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206710107|emb|CAR34462.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224469357|gb|ACN47187.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322716032|gb|EFZ07603.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326629079|gb|EGE35422.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 293

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 156/297 (52%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q   +   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K     ISG   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGIKSATIKISGEYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ A
Sbjct: 178 GGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 292 NR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDTKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
 gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
          Length = 364

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 185/344 (53%), Gaps = 10/344 (2%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L+ R  EIE    +    +   K  E          ++  + +      D   +    +
Sbjct: 28  KLEARIKEIETLEQQKEFWEDSKKAGEYQKEKKRCERQLEKFQEANLALNDAKELFEISS 87

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D +  +    E  ++E++I++ E E+         +     I  I  G GG+E+  +  
Sbjct: 88  DDEQTLNELFSEANSLEEQIKKAEIEVMLSDELDSNNA----IFTITPGAGGTESQDWAS 143

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L+RMY R+A  R +KVE+L   + D+ G K+    I G   +   K E+G+HR+ R+  
Sbjct: 144 MLYRMYLRWAERRGFKVELLDYQEGDEAGIKDASFIIKGENAYGYAKVENGIHRLVRISP 203

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ + HTS A+V V PE  +  +++I  +D+RIDT RASG+GGQH+N T+SA+RITHI
Sbjct: 204 FDSNAKRHTSFASVQVTPEIDDNIEIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHI 263

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PTGI+V   +++SQH+N+  A+K+L+++LY++E ++   + S + K +IG G    +IR+
Sbjct: 264 PTGIVVQCQNDRSQHKNKATALKMLKSKLYELEAQKRNEQTSNDDKSEIGWG---HQIRS 320

Query: 309 YNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           Y  +   +I D R N+    +E +L G ID I+  +L    +K 
Sbjct: 321 YVLAPYQQIKDLRSNIAYSNVEAILDGDIDAILEGVLIHINSKQ 364


>gi|328675334|gb|AEB28009.1| Peptide chain release factor 2 [Francisella cf. novicida 3523]
          Length = 325

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 103/331 (31%), Positives = 171/331 (51%), Gaps = 17/331 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L ++   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETL-------SELLELAEEDET 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V + SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           RI D R  +     + VL G +D  I   L 
Sbjct: 292 RIKDLRTGVENTNTQAVLDGDLDKFIEASLK 322


>gi|30961857|gb|AAP40012.1| peptide chain release factor-2 [Citrobacter freundii]
          Length = 293

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 99/297 (33%), Positives = 158/297 (53%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A    + +   ++ +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAV-----AELDTLEDKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   I+G   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ A
Sbjct: 178 GGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 292 NR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDTKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|238854884|ref|ZP_04645214.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3]
 gi|260664171|ref|ZP_05865024.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US]
 gi|282931596|ref|ZP_06337089.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|313472385|ref|ZP_07812877.1| peptide chain release factor 2 [Lactobacillus jensenii 1153]
 gi|238832674|gb|EEQ24981.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3]
 gi|239529755|gb|EEQ68756.1| peptide chain release factor 2 [Lactobacillus jensenii 1153]
 gi|260562057|gb|EEX28026.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US]
 gi|281304207|gb|EFA96316.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
          Length = 332

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 94/331 (28%), Positives = 165/331 (49%), Gaps = 12/331 (3%)

Query: 23  MSESPSVDAYIKLTEEYA---AISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +      +  +    +       +   Q   +E+    ++ + +      ++ 
Sbjct: 1   MADPDFWNNQESAQKLISATNKLKEKRDHFNDLAQAFSDEEAALELLKEESDTDLQAEVE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                +  + +++  ++    LL     D  + ++EI  G GG+EA  +   L RMY+R+
Sbjct: 61  -----SDLESLKDSFHQYELNLLLSGKYDTNNALMEIHPGAGGTEAMDWAQMLMRMYQRF 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           +    +  E+      D+ G K +   I G   +  +K E GVHR+ R+   +A+ R HT
Sbjct: 116 SEAHGFTFEIDDYEPGDEAGVKSVSVLIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTS 257
           S A+V V+PE  +  +VDI   D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + 
Sbjct: 176 SFASVEVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +++SQ QN+  AM  LRA+L+ +E ++   E+   + +Q        +IR+Y F     +
Sbjct: 236 AQRSQFQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQ-QDIAWGSQIRSYVFHPYSMV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            DHR N     +  V+ G +D++I   L   
Sbjct: 295 KDHRTNFETSDVNGVMDGKLDNLIYSFLQWR 325


>gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS278]
 gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS278]
          Length = 323

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 99/317 (31%), Positives = 164/317 (51%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   ++ I   +++  +  ++  +    N    + +         ++  R    
Sbjct: 1   MQERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A    +KVE L  S  
Sbjct: 57  -RELEALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS ++V + P     I 
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+   + +A++  K +IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEKAAADQAAKTEIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTSG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLNGDLDEFMAATLAQR 309


>gi|312868547|ref|ZP_07728744.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
 gi|311095918|gb|EFQ54165.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
          Length = 332

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 103/334 (30%), Positives = 167/334 (50%), Gaps = 10/334 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    +   +  +     + + +K   Y   + +             + E     + E
Sbjct: 1   MAQPDFWNDNERAQKLINDNNDLKAKRDTYVALRDQL--ADLETNLELLELEPDPELEKE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                 +  E   +     L  +  D K+ ILEI  G GG+EA  +   L RMY R+A  
Sbjct: 59  FATSFAQTEEALQQYRLNQLLSEKYDSKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
               VE  +    +  G K +   I G   F  ++ E GVHR+ R+   +++GR HTS A
Sbjct: 119 HGLTVETANYEPGEVAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    ++VDI   D+R+DT R+SG+GGQH+N T+SAVRITH+PTG++  + +E+
Sbjct: 179 SVDVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ  NR  AM +L+++LY++E ++ A ER+     Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWG---SQIRSYVFHPYTLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           D+R     +  + V+ G +D  IN  L    ++ 
Sbjct: 296 DNRSGHETHNGQAVMDGDLDPFINAYLQWKLSQQ 329


>gi|73989054|ref|XP_848713.1| PREDICTED: similar to mitochondrial translational release factor 1
           isoform 2 [Canis familiaris]
          Length = 444

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 130/360 (36%), Positives = 207/360 (57%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +      +     L   +A ++P+ +      + +Q  ++L +
Sbjct: 75  QKYMEDLNKEYRTLDQCLQHLSVNEGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEELDS 134

Query: 65  VIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +        + ++++LA  E   I ++I  L +E+   L+PK+  D    I+E+ +G  T
Sbjct: 135 MCKSLSKQDEKQLQELALEERQTIAEKINVLYSELFQSLVPKEKYDKNDVIIEVTSGRTT 194

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y++ + WK E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 195 GGDICQQFTREIFDMYQNYSSYKNWKFELLNYTPADYGGLHHAAARISGDNVYKHLKYEG 254

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           GVHRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 255 GVHRVQRIPEVGLSARMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHV 314

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A++VLRARLY    ++   ++ + RKLQ
Sbjct: 315 NTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDKCQQQSTRKLQ 374

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI   +  ++  L G   +D +I  LL +   + I  
Sbjct: 375 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRGIKEFLCGEKCLDQLIQRLLHSADEEAITE 434


>gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [polymorphum gilvum SL003B-26A1]
 gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1]
          Length = 323

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 108/317 (34%), Positives = 159/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +   + +  +  +L  +       S + +  +      ++ ++    
Sbjct: 1   MRERQQLDEGITGVRRLESELSDNIELIELGDLEGDKSVVNEAEEALRGLKDEVLK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L     D     LEI AG GG+E+  +   L RMY R+A  R +KVE+L   D 
Sbjct: 57  -LQMASLLSGEADGNDTYLEINAGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEVHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   ++  R HTS A+  V P     I+
Sbjct: 116 EEAGIKSATLLIKGENAYGWLKTESGVHRLVRISPYDSQARRHTSFASAWVYPVVDDSIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +DI   D RIDT RASG+GGQHVNTTDSAVRITHIPTGI+V   SE+SQH+NR  A  +L
Sbjct: 176 IDINESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQSERSQHKNRATAWAML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +AR+Y+ E ++   A    A  K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 KARMYEAELQKREEAASAEAASKTSIGWG---HQIRSYVLQPYQMVKDLRTGVESSSPDD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLNGDLDPFMEAALAQR 309


>gi|242066770|ref|XP_002454674.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
 gi|241934505|gb|EES07650.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
          Length = 467

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/340 (28%), Positives = 161/340 (47%), Gaps = 11/340 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +  R  ++ + +      +  +           ++ KI   +Q +QE  +   ++     
Sbjct: 123 ILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQLEQELIEHIEMLRLARE 182

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           +++     +      +  I   E       L    +D  SC +E++AG GG+E+  +   
Sbjct: 183 ENDNELEMESMRALADMRISAKEK--ELNALLSRDNDSCSCFIEVQAGAGGTESMDWAAM 240

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           +  MY+ +A  R + V V+     +  G K     + G   F   K E GVHR+ R+   
Sbjct: 241 VMNMYKSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 300

Query: 192 EASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
           ++  R HTS A VAV+P    A     I   D+RI+  R+ G GGQH NTT+SA+RI HI
Sbjct: 301 DSGKRRHTSFAAVAVIPILGDASSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRIVHI 360

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERI 306
           PTGI   + +E+SQH N+  AM VL++RL  +E  R A   + + +   +I  G+   +I
Sbjct: 361 PTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGN---QI 417

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y     R + D R N  +   + VL+G +DD I   L+
Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|291299376|ref|YP_003510654.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568596|gb|ADD41561.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM
           44728]
          Length = 376

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 156/353 (44%), Gaps = 7/353 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L    +E+E   +     D      +  + +S + S+++  +  ++   D   +  
Sbjct: 25  DLDALSVEKSELEAAAASPDLWDDTTHAQKVTSRLSYVQSELNRIEDLRRRLDDAEVLWD 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              S+ +   + +             E       L     D +  ++ IR+G GG+++A 
Sbjct: 85  LAQSEEDPAAVEEASKELAALSKAIEEL--EVRTLLSGEYDSREALISIRSGAGGADSAD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A    +  EV   S  ++ G K     +     +  +  E G HRV R
Sbjct: 143 FAEQLMRMYLRWAERHGYPTEVYDVSYAEEAGIKSATFAVKAPYAYGTLSVEQGTHRVVR 202

Query: 188 VPATEASGRVHTSA-ATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +  GR  T+  A   V       D+DIP ++IR+D  R+SG GGQ VNTTDSAVRI
Sbjct: 203 ISKYDNQGRRQTAFAAVEVVPVVEQTDDIDIPDDEIRVDVYRSSGPGGQGVNTTDSAVRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+ TGI+V   +E+SQ QNR  AM VL+A+L    R+    +    R     S    E+
Sbjct: 263 THLETGIVVSCQNERSQLQNRATAMAVLKAKLLARRREEENAKIDELRGSVQAS--WGEQ 320

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +R+Y     + + D R       +  V  G ID +I   +   + +    A+E
Sbjct: 321 MRSYVQHPYQMVKDLRTGWETANVMAVYDGEIDGLIEAGIRWRKQQENQKATE 373


>gi|156055958|ref|XP_001593903.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980]
 gi|154703115|gb|EDO02854.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 490

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 124/373 (33%), Positives = 195/373 (52%), Gaps = 32/373 (8%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +L      +    SES +     K+ +    +  + + +  +++ K+   +L  ++ D +
Sbjct: 111 NLAAEHDRLSSETSESFN----AKVAKRIGELQDVATALKKWEETKESLSELDALLQDSS 166

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D E+R+LA  ++      + EL   +   L PK    +  C++EIR G GG EAA+F  
Sbjct: 167 TDEELRELAVEDLTTTTAHLEELSRNLTTSLTPKHPFAELPCLVEIRPGAGGGEAAIFAA 226

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHR 184
           DL RMY  Y A ++++  ++     D  G        E+V  I   G +  ++ E+GVHR
Sbjct: 227 DLLRMYRAYCARKRFRSTIIKYETADGEGAGSDSPISEVVLEIETPGSYDSLRGEAGVHR 286

Query: 185 VQRVPATEASGRVHTSAATVAVLP-----------------EAAEIDVDIPLEDIRIDTM 227
           VQRVPATE  GR HTSA +V VLP                      D  +   D+R D M
Sbjct: 287 VQRVPATEKQGRTHTSAVSVMVLPSFPTTGQEGQEYWEADLNDPNSDYYVNPADVRTDVM 346

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RA G+GGQHVNTTDSAVR+TH+PT  +V+    +SQ QNR +A +VLR+RL   +R+   
Sbjct: 347 RARGAGGQHVNTTDSAVRLTHVPTNTVVSMQEGRSQLQNRQKAWQVLRSRLAAAKREARE 406

Query: 287 NERSANRKLQIG--SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINP 342
            +    R+  IG     R ++IRTYN+ Q R+TDHR  L+++ L+ V++G   ++ +I+ 
Sbjct: 407 EQLINLRRSVIGVAKMGRGDKIRTYNWGQQRVTDHRSGLSVHNLDDVMEGGDELEKVIDS 466

Query: 343 LLTAHQAKMIGSA 355
           +      + I   
Sbjct: 467 VKAWFSEQEILGL 479


>gi|296158326|ref|ZP_06841157.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
 gi|295891270|gb|EFG71057.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
          Length = 280

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 101/278 (36%), Positives = 155/278 (55%), Gaps = 7/278 (2%)

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E  +   +   +  + I +   ++ +  +  +  D  +  L+I+AG GG+EA  +   L
Sbjct: 4   EEGDEATLLACESDAQGIEQRVADMEFRRMFSNPADPNNAFLDIQAGAGGTEACDWAAML 63

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            R Y RY   + +K EVL  +D D  G K     I G   +  ++ E+GVHR+ R    +
Sbjct: 64  LRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFD 123

Query: 193 ASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +SG  HTS ++V V PE  +  +VDI   D+RIDT RASG+GGQH+N TDSAVRITH+P+
Sbjct: 124 SSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHMPS 183

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRT 308
           GI+V   +++SQH+NR  AM +L++RLY+ E ++   E+      K  +G G    +IR+
Sbjct: 184 GIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWG---HQIRS 240

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y     RI D R N+ +   + VL G +D  I+  L  
Sbjct: 241 YVLDNSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 278


>gi|238921196|ref|YP_002934711.1| peptide chain release factor 2, [Edwardsiella ictaluri 93-146]
 gi|238870765|gb|ACR70476.1| peptide chain release factor 2, putative [Edwardsiella ictaluri
           93-146]
 gi|304560096|gb|ADM42760.1| Peptide chain release factor 2 [Edwardsiella tarda FL6-60]
          Length = 293

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A    +     ++ +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAV-----AELDLLDVKLGQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  + +K E++  S+ +  G K     ISG   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTG++    +++SQH+N+ +AMK ++A+LY++E ++   ER  
Sbjct: 178 GGQHVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQ 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R ++     + VL G +D  I   L A
Sbjct: 238 MEDTKSDIGWG---SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|85059968|ref|YP_455670.1| peptide chain release factor RF-2 [Sodalis glossinidius str.
           'morsitans']
 gi|84780488|dbj|BAE75265.1| peptide chain release factor RF-2 [Sodalis glossinidius str.
           'morsitans']
          Length = 289

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 93/293 (31%), Positives = 151/293 (51%), Gaps = 12/293 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++   L  +    + +    +       A    +     ++ +  +     D   C ++I
Sbjct: 2   EDVAGLLELAVGEDDEETFLETQ-----AELDGLEAKLGQLEFRRMFSGEYDSADCYVDI 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   + G   +  +
Sbjct: 57  QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKVIGDYAYGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVN T+SAVRITH+PT I+    +++SQH+N+ +AMK L+A+LY+ E ++   E+    +
Sbjct: 177 HVNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFELQKKNAEKKALED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 237 TKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNAQSVLDGDLDKFIEASLK 286


>gi|294634840|ref|ZP_06713362.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685]
 gi|291091713|gb|EFE24274.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685]
          Length = 293

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A   ++     ++ +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEADDEETFDEAV-----AELDQLEVKLGQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  + +K E++  S+ +  G K     ISG   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIKISGDYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTG++    +++SQH+N+ +AMK ++A+LY++E ++   ER  
Sbjct: 178 GGQHVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEVQKKNAERQQ 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               K  IG G    +IR+Y     RI D R ++     + VL G +D  I   L A
Sbjct: 238 MEENKSDIGWG---SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|167622749|ref|YP_001673043.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4]
 gi|167352771|gb|ABZ75384.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4]
          Length = 293

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 12/297 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           D   ++ + L  +  + + +    D A        +        + +  +     D   C
Sbjct: 2   DSGLEDIEGLLELAVEEDDEETFNDAAAELQDLERRLEE-----LEFRRMFSGPHDASDC 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            L+I++G+GG+EA  +   + RM+ R+     +K E++  +  D  G K      +G   
Sbjct: 57  YLDIQSGSGGTEAQDWANMVLRMFLRWGDAHDYKPELIEVTGGDVAGIKGATIKFTGEYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASG 231
           F  ++ E+GVHR+ R    ++SG+ HTS  +V V PE  +  ++DI   D+RIDT RASG
Sbjct: 117 FGSLRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANE 288
           +GGQHVN T+SA+RITH+PT  +V   +++SQH+NR  AMK L+A+LY++E   +    +
Sbjct: 177 AGGQHVNKTESAIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQ 236

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 237 AAEDAKSDIGWG---SQIRSYVLDDARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|315037900|ref|YP_004031468.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
 gi|325956373|ref|YP_004291785.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
 gi|312276033|gb|ADQ58673.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
 gi|325332938|gb|ADZ06846.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
 gi|327183192|gb|AEA31639.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1118]
          Length = 332

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 94/332 (28%), Positives = 157/332 (47%), Gaps = 16/332 (4%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M++    +   K  +  +    +           +  ++E     ++ +       ++  
Sbjct: 1   MAQPDFWNDQEKAQKLISENNVLKEKRDSFLKLQKGYEDESTAVELLREEPDPDLQKETE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +      ++      +     LL     D  + ++EI  G GG+EA  +   L RMY+RY
Sbjct: 61  EDLATLQDEF-----HNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRY 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
                +K E+      ++ G K + A I G+  +  +K E+GVHR+ R+   +A+ R HT
Sbjct: 116 CDSAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHT 175

Query: 200 SAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTS 257
           S A+V V+PE  +         D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + 
Sbjct: 176 SFASVEVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG- 314
           +++SQ QNR  AM  LRA+L+ +E ++   ++ A +  Q  IG G    +IR+Y F    
Sbjct: 236 AQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWG---SQIRSYVFHPYN 292

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + D R          V+ G +   I   L  
Sbjct: 293 LVKDLRTGYETADANGVMDGKLQPFIYSYLQW 324


>gi|325109320|ref|YP_004270388.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces
           brasiliensis DSM 5305]
 gi|324969588|gb|ADY60366.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces
           brasiliensis DSM 5305]
          Length = 373

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 106/339 (31%), Positives = 171/339 (50%), Gaps = 10/339 (2%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            +  EI  RM++    D   K  E  A +  + S ++  ++  Q   DL  ++    +D 
Sbjct: 30  EQVKEINDRMAQPGFWDNQEKAQETMAELRRLKSLVTPLEELVQGRDDLEVLLEFAEADD 89

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
              +    E+ +    +  + +++ + LL    +D  +  + I+AG GG++AA +   L 
Sbjct: 90  S--EETVQEITSTCDRLGSIVDKVEFQLLLGQPEDALNAYVTIQAGEGGTDAADWAEMLL 147

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY R+A   +   E+L  +D ++ G +     I G   F  +K ESG HR+ R+    +
Sbjct: 148 RMYIRWAEKEEMATELLERTDAEEAGIRHATLLIKGDYAFGYLKGESGNHRLVRMSPFNS 207

Query: 194 SGRVHTSAATVAVLPEAAEIDVDIP--LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +G+  T+ A V V PE  +          D+  DTMRA G+GGQHVN T+SAVR+TH  +
Sbjct: 208 AGKRQTAFAAVDVTPEVDDSFEIDIDWDNDVDEDTMRAGGAGGQHVNKTESAVRLTHKES 267

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRT 308
           G++V   +E+SQHQNR  A K+L A+LY +E ++  +E +A R  K +IG G   E IR 
Sbjct: 268 GLVVRCQNERSQHQNRASARKMLTAKLYQMEIEKRESENAARRGEKSKIGFG--GETIRN 325

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y     + + D R  L       VL+G +D  +   L  
Sbjct: 326 YVLQPEQFVKDTRSELKTANPLTVLEGELDPFLEAYLKW 364


>gi|260593398|ref|ZP_05858856.1| peptide chain release factor 2, programmed [Prevotella veroralis
           F0319]
 gi|260534674|gb|EEX17291.1| peptide chain release factor 2, programmed [Prevotella veroralis
           F0319]
          Length = 372

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+  R                F E +LR       D   +  E+   +  I 
Sbjct: 1   MITADQLKDITERTDALHRYLGIDEKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  YD+ +    ++      +  +    +          K I +LE       + +  
Sbjct: 61  KWIKGYDEARSLTDEVQLAFDFYKDNLVTEEEVDTAYNKALKAIEDLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+++I +G GG+E+  +   L RMY R+     +KV +    + D+ G K +   
Sbjct: 117 EDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAHGYKVTISDIQEGDEAGIKSVTMK 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
             G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 FEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPARVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM++L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRMEEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G IDD I   L  
Sbjct: 354 GKIDDFIKAYLME 366


>gi|226528475|ref|NP_001148129.1| peptide chain release factor 2 [Zea mays]
 gi|195616002|gb|ACG29831.1| peptide chain release factor 2 [Zea mays]
          Length = 467

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 96/340 (28%), Positives = 160/340 (47%), Gaps = 11/340 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +  R  ++ + + +    +  +           ++ KI   +Q +QE  +   ++     
Sbjct: 123 ILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEMLRLARE 182

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           +++     +      +      E       L    +D  SC +E++AG GG+E+  +   
Sbjct: 183 ENDNELEMESMKALADMRRSAKEK--ELNALLSGDNDSCSCFIEVQAGAGGTESMDWAAM 240

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           +  MY  +A  R +K+ V+     +  G K     + G   F   K E GVHR+ R+   
Sbjct: 241 VMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 300

Query: 192 EASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
           ++  R HTS A VAV+P          I   D+RI+  R+ G GGQH NTT+SA+RI HI
Sbjct: 301 DSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRIVHI 360

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERI 306
           PTGI   + +E+SQH N+  AM VL++RL  +E  R A   + + +   +I  G+   +I
Sbjct: 361 PTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGN---QI 417

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y     R + D R N  +   + VL+G +DD I   L+
Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|225621552|ref|YP_002722811.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1]
 gi|225216373|gb|ACN85107.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1]
          Length = 312

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +   I  +    +      +L  +  + N     ++L    +   +        
Sbjct: 1   MKERMLLLDKIEPVENLIKNSNNIYELVEMAIESNDSEMEKELETECLELQKVFDE---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L     D K+  L + AG GG+E+  +   L RMY R+     + VE       
Sbjct: 57  -LETKNLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV 215
           D+ G K+I   + G   +  ++ E GVHR+ R+   +A+ + HTS   V+V+P+  E   
Sbjct: 116 DEAGIKQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIE 175

Query: 216 DIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
                 D+RIDT RASG+GGQHVN T SA+RITHIPT I+V   +E+SQH N+  AMK+L
Sbjct: 176 IEINPADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKML 235

Query: 274 RARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +A+LY +E++++  E+      K  I  G+   +IR+Y F   + + D R       +  
Sbjct: 236 KAKLYQLEKEKLDKEKQKIAGEKTDIAWGN---QIRSYVFQPYQMVKDLRTGCESGNMNS 292

Query: 331 VLQGYIDDIINPLLTAH 347
           V+ G ID+ I+  L   
Sbjct: 293 VMDGNIDEFISAYLKQQ 309


>gi|90424348|ref|YP_532718.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB18]
 gi|90106362|gb|ABD88399.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisB18]
          Length = 322

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 98/317 (30%), Positives = 159/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   +  I   +++  +  D+  +    N      +    E  A  K +++   
Sbjct: 1   MQERTSLEDSLGGIGKVERELTDNVDMIELGEAEND-----EGVVAEAEAALKALKKEVA 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A    +K+E L  +  
Sbjct: 56  RRELEALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETQG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS ++V + P     I 
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVVDNTIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+N+ +A  +L
Sbjct: 176 IDIAESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+           K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEQAAADQAAKTDIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTAG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMGATLAQR 309


>gi|161506411|ref|YP_001573523.1| hypothetical protein SARI_04609 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867758|gb|ABX24381.1| hypothetical protein SARI_04609 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 293

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 105/297 (35%), Positives = 161/297 (54%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q   +   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K EV+  S+ +  G K     ISG   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ A
Sbjct: 178 GGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 292 NR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDTKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|219887937|gb|ACL54343.1| unknown [Zea mays]
          Length = 467

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 96/340 (28%), Positives = 160/340 (47%), Gaps = 11/340 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +  R  ++ + + +    +  +           ++ KI   +Q +QE  +   ++     
Sbjct: 123 ILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEMLRLARE 182

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           +++     +      +      E       L    +D  SC +E++AG GG+E+  +   
Sbjct: 183 ENDNELEMESMKALADMRRSAKEK--ELNALLSGDNDSCSCFIEVQAGAGGTESMDWAAM 240

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           +  MY  +A  R +K+ V+     +  G K     + G   F   K E GVHR+ R+   
Sbjct: 241 VMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 300

Query: 192 EASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
           ++  R HTS A VAV+P          I   D+RI+  R+ G GGQH NTT+SA+RI HI
Sbjct: 301 DSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRIVHI 360

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSERI 306
           PTGI   + +E+SQH N+  AM VL++RL  +E  R A   + + +   +I  G+   +I
Sbjct: 361 PTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGN---QI 417

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y     R + D R N  +   + VL+G +DD I   L+
Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|197294594|ref|YP_001799135.1| Protein chain release factor B [Candidatus Phytoplasma
           australiense]
 gi|171853921|emb|CAM11884.1| Protein chain release factor B [Candidatus Phytoplasma
           australiense]
          Length = 370

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 104/333 (31%), Positives = 171/333 (51%), Gaps = 7/333 (2%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
             +I   M +    D   K        + +  KI+     +   QDL T +   ++    
Sbjct: 33  LNQINELMQKKDFWDDPKKAVATSQKFNDLQEKINTLKHLETNHQDLVTFLDLESN---- 88

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
           ++     +    K++ +        +      D+ + IL    G GG+E+  +   LFRM
Sbjct: 89  QNNETAFLEEEIKKLIDAVLNFKIKVFLNQPYDNNNAILIFHPGAGGTESQDWCEMLFRM 148

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y++YA  + +K E+L     ++ G K     + G   +  +K E GVHR+ RV   + + 
Sbjct: 149 YQKYAQKKNFKTEILDYQSGEEAGIKSATLLVKGAYAYGYLKAEKGVHRLVRVSPFDTNA 208

Query: 196 RVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           + HTS  +  VLPE  E   +D+  ED++ D  R+SG+GGQHVNTTDSAVRITH+PTG++
Sbjct: 209 KRHTSFVSCDVLPEIKEKIKIDLRQEDLKFDFFRSSGAGGQHVNTTDSAVRITHLPTGLV 268

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V   +E+SQ+QNR +A+++L+ +L+ +  K+   E + N + +        +IR+Y F  
Sbjct: 269 VSCQNERSQNQNREKALQMLKIKLFQLADKKQKEEHAKNFQGEQKEIGWGSQIRSYVFHP 328

Query: 314 G-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              + DHR N  +++LE V+ G ID  IN  LT
Sbjct: 329 YKMVKDHRTNQEIFQLEQVMDGNIDVFINGYLT 361


>gi|153814569|ref|ZP_01967237.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756]
 gi|317501267|ref|ZP_07959471.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|145848063|gb|EDK24981.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756]
 gi|316897334|gb|EFV19401.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 316

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 167/315 (53%), Gaps = 6/315 (1%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   +   ++   + +D+  +I     +       +IE    + E    E  I 
Sbjct: 1   MKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIEEELQQFEETFEELRIG 60

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
            L       D  + I+ + AG GG+E+  + G L+RMY R+A  + + +E L   + D  
Sbjct: 61  TL--LTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKGYSIEELDYLEGDVA 118

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDI 217
           G K +   + G   +  ++ E GVHR+ R+    ++G+  TS A+  V      +ID++I
Sbjct: 119 GVKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEEDIDIEI 178

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +D++IDT R+SG+GGQH+N T SAVRITH+PTGI+V   +E+SQH N+ +AM++L+++
Sbjct: 179 NDDDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSK 238

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY 335
           LY ++++  A + S  R  ++   +   +IR+Y       + DHR N  +  +  V+ G 
Sbjct: 239 LYLMKQQEQAEKMSDIR-GEVRDINFGNQIRSYVMQPYTMVKDHRTNAEVSNVGGVMDGN 297

Query: 336 IDDIINPLLTAHQAK 350
           ID  IN  L+A+  +
Sbjct: 298 IDPFINAYLSANTEQ 312


>gi|268316864|ref|YP_003290583.1| LigA [Rhodothermus marinus DSM 4252]
 gi|262334398|gb|ACY48195.1| LigA [Rhodothermus marinus DSM 4252]
          Length = 371

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 168/348 (48%), Gaps = 13/348 (3%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K + A++          D   +  E    I+   S ++ ++Q +++  D+ T++     +
Sbjct: 25  KEKIAKLNEERLAPGFWDNPERAREVEKQIAEEESWVAAWEQLRRQADDVQTLLELQQEE 84

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            +     + E+      + +  +E+    L  D DD ++ IL I  G GG+E+  +   L
Sbjct: 85  PD--ANLEEEIAREVARLEQQLDELELRSLLTDPDDHRNAILTIHPGAGGTESQDWAEML 142

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+     + VE+L     D  G K     I+G   +  +K ESGVHR+ R+   +
Sbjct: 143 LRMYTRWGERHGYDVELLEYQAGDVAGIKSATLRIAGPYAYGYLKGESGVHRLVRISPFD 202

Query: 193 ASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           ASGR HTS A+V V PE  +  +VDI  ++I + T R+ G GGQ+VN  ++ VR+     
Sbjct: 203 ASGRRHTSFASVFVYPEIDDSIEVDIRPDEIEMQTFRSGGKGGQNVNKVETGVRLIWHGK 262

Query: 252 --------GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
                    +   + E+SQ QNR RA+ +L++R+Y +ER+    E+   R+ Q    +  
Sbjct: 263 LSNGEEARVVAECTEERSQLQNRQRALTMLKSRIYQLEREIREAEKRK-RESQKKKIEWG 321

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            +IR+Y F     + DHR    +  ++ V+ G +D  I   L +   +
Sbjct: 322 SQIRSYVFQPYTMVNDHRTETKVTDVQAVMDGDLDPFIRAYLLSQVNE 369


>gi|256372525|ref|YP_003110349.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009109|gb|ACU54676.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 369

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 98/335 (29%), Positives = 159/335 (47%), Gaps = 18/335 (5%)

Query: 25  ESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           +        K   L+  Y  +   +  I+  D    +      +  D    +   +    
Sbjct: 42  DPGVWSDPAKGRELSRRYGTLKDDVELIARLDAMLADSNVAIEMADDDPDLAAEAEDVLT 101

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
            + A    I           L     D+   +LEI +G GG++A  +   + RMYER+A 
Sbjct: 102 SLAAHLDAIE-------IRSLLAGEFDESDAVLEIHSGAGGTDAQDWAQMMLRMYERWAQ 154

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            R ++ EV   ++  + G     A + GR  +  +  E GVHR+ R+   +A  R  TS 
Sbjct: 155 GRGFEFEVDEVTEGQEAGILSATAIVRGRYAYGLLVAERGVHRLVRISPFDAQHRRQTSF 214

Query: 202 ATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A++ V P      +V I  +D+RIDT R+SG+GGQHVN TDSAVRITH+PTGI+V   +E
Sbjct: 215 ASLDVTPLAEDAGEVVIDEKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTGIVVSCQNE 274

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-I 316
           +SQ QNR +AM++L ++L    R+    +  A    ++ +G  +   ++R+Y  +  + +
Sbjct: 275 RSQLQNRAKAMQILVSKLEQRRREEQRAQLDALSGPRVDVGWAN---QVRSYVLAPYQLV 331

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            DHR       ++ VL G +D  I   L   + K 
Sbjct: 332 KDHRSGYEDRNVQAVLDGRLDPFIEAFLAWRREKH 366


>gi|288803779|ref|ZP_06409207.1| peptide chain release factor 2, programmed [Prevotella
           melaninogenica D18]
 gi|302345945|ref|YP_003814298.1| putative peptide chain release factor 2 [Prevotella melaninogenica
           ATCC 25845]
 gi|288333766|gb|EFC72213.1| peptide chain release factor 2, programmed [Prevotella
           melaninogenica D18]
 gi|302150148|gb|ADK96410.1| putative peptide chain release factor 2 [Prevotella melaninogenica
           ATCC 25845]
          Length = 371

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 163/373 (43%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D++ R                F E +LR       D   +  E+   +  I 
Sbjct: 1   MITADQLKDIQERTEALHRYLDIDKKRIEFEEEQLRTQAPDFWDDPARAQEQMKKVKDIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  YD+ +    ++      +  +    +        + K I  LE       + +  
Sbjct: 61  KWVKDYDKARALADEVQLAFDFYKDELVTEEEVDTAYAKVLKVIEGLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+++I +G GG+E+  +   L RMY R+   + ++V +    + D+ G K +   
Sbjct: 117 EDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAQGYRVTISDIQEGDEAGIKSVTMK 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
             G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 FEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM++L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRMEEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G IDD I   L  
Sbjct: 354 GKIDDFIKAYLME 366


>gi|121996859|ref|YP_001001646.1| peptide chain release factor 2 [Halorhodospira halophila SL1]
 gi|121588264|gb|ABM60844.1| bacterial peptide chain release factor 2 (bRF-2) [Halorhodospira
           halophila SL1]
          Length = 291

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 109/295 (36%), Positives = 165/295 (55%), Gaps = 14/295 (4%)

Query: 59  EQDLHTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
             D   ++       D+E  +  Q ++  +  ++  LE    +  +     D  +  L+I
Sbjct: 2   LDDADEMVAMAREEGDAETLEAVQADIQRVAGQVETLE----FRRMFSGEMDTSNAFLDI 57

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  R ++ EV+  +   + G K     +SG   F  +
Sbjct: 58  QAGSGGTEAQDWAEMLLRMYLRWAEARGFETEVIEVTAGQEAGVKSATIKVSGEYAFGWL 117

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI--PLEDIRIDTMRASGSGG 234
           + E+GVHR+ R    ++ GR HTS ++V V PE  E +VDI     D+R+D  RASG+GG
Sbjct: 118 RTETGVHRLVRKSPFDSGGRRHTSFSSVFVSPEIDEENVDIEIDPSDLRVDVFRASGAGG 177

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSA 291
           QHVNTT+SAVRITH PTGI+V + +++SQH+NR  AM  LRA+LY++E +R     E   
Sbjct: 178 QHVNTTESAVRITHEPTGIVVQSQNDRSQHKNRATAMSQLRAKLYELEMQRRRAEAEAQE 237

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + K  IG G+   +IR+Y   Q RI D R  + +   + VL G++D  I   L A
Sbjct: 238 DTKSDIGWGN---QIRSYVLDQSRIKDLRTGVEIGNTQAVLDGHLDPFIQASLKA 289


>gi|227328400|ref|ZP_03832424.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 248

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 100/249 (40%), Positives = 144/249 (57%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C L+I+AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K
Sbjct: 1   MFSGQYDSADCYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                I G   F  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 FEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 KFIEASLKA 246


>gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409924|gb|ABP66928.1| bacterial peptide chain release factor 2 (bRF-2)
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 323

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 118/320 (36%), Positives = 174/320 (54%), Gaps = 10/320 (3%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +    I  +  KI  Y +   + +DL  +      +S I    ++E   I+ E +  E 
Sbjct: 5   QKVLQQIKRLKDKIERYQKLYSQWEDLKVLTQLCIEESNIEMSDELEKDLIDLERKIEEF 64

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
           ++  L       D  + IL I AG GG+EA  +   L RMY R+AA + +KVE L     
Sbjct: 65  KLEIL--LNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPG 122

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEID 214
           ++ G K +   I G   +  +K E GVHR+ R+   +A+GR HTS A V VLPE   + D
Sbjct: 123 EEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTD 182

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I  ED+ IDT RASG+GGQHVN T+SAVRI HIPTGI+V   +E+SQH+NR  A+K+L
Sbjct: 183 IEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKIL 242

Query: 274 RARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEY 330
           +A+L ++  K    +    +  Q  IG G+   +IR+Y F     + DHR +  +  +E 
Sbjct: 243 KAKLLELREKERREKIQKLKGEQTEIGWGN---QIRSYVFCPYTLVKDHRTDAEVGNVEA 299

Query: 331 VLQGYIDDIINPLLTAHQAK 350
           V+ G ID  IN  L   + +
Sbjct: 300 VMDGEIDVFINAYLKKFRNE 319


>gi|295097429|emb|CBK86519.1| bacterial peptide chain release factor 2 (bRF-2) [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 293

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 102/297 (34%), Positives = 162/297 (54%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAV-----AELDVLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   I G   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID+DI   D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTG++    +++SQH+N+ +AMK ++A+LY++E ++   E+  
Sbjct: 178 GGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|154248590|ref|YP_001419548.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2]
 gi|154162675|gb|ABS69891.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2]
          Length = 322

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/317 (30%), Positives = 152/317 (47%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +   +  I    +   +  +L  +      +  I + +        +  R    
Sbjct: 1   MQERTTLEDGLGAIDRVLRDLDDNIELIELGEAEGDEGVITEASASLDGLKAELAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+++  +   L RMY R+     +KVE++  S  
Sbjct: 57  -RELEALLSGEADSNDSYLEVHAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELMDESQG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID- 214
           +  G K     + G   +  +K E+GVHR+ R+   +++ R  TS A+V V P   +   
Sbjct: 116 EQAGLKSATIQVKGHNAYGWLKTEAGVHRLVRISPFDSNARRQTSFASVDVYPVVDDRIV 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           VDI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTGI +V+  ++SQH+NR  A  +L
Sbjct: 176 VDIKEADVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVSEGDRSQHKNRATAWNML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RA+LYD+E K+           K  IG G    +IR+Y     + + D R  +T    + 
Sbjct: 236 RAKLYDLELKKREAEAAAEQAAKTDIGWG---HQIRSYVLQPYQLVKDLRTGVTSGTPQE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGDLDPFMQAALAQR 309


>gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0770_41L09]
          Length = 331

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 104/328 (31%), Positives = 156/328 (47%), Gaps = 10/328 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M +    D+  +        + +   +  +     +             + E       E
Sbjct: 1   MVQPGFWDSQDQAKATIDESNRLKGWLDPWSSL--DAGVSELTALVELLEEEEDAELDAE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                  + +    +    + +  DD +  I+ I  G GG E+  + G L RMY R++  
Sbjct: 59  FTRGLASVEKDLEVLEVRTMLQGEDDHRDAIVTIHPGAGGLESQDWAGMLMRMYTRWSER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R + +EVL     ++GG K     I G   +  +K E GVHR+ R+   +   R HTS A
Sbjct: 119 RGFGIEVLDLQLAEEGGIKSATLEIKGECAYGYLKAEGGVHRLVRISPFDQQSRRHTSFA 178

Query: 203 TVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V + P     I++DI   D+RIDT RASG+GGQHVN TDSAVRITH PTGI+     E+
Sbjct: 179 SVFIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGIVATCQQER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           SQH+N+  AMK+LRA LY    +    ER+     K +IG G+   +IR+Y F     + 
Sbjct: 239 SQHKNKSTAMKMLRAALYQHALQEQERERAVLEATKTEIGFGN---QIRSYVFQPYTMVN 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLT 345
           DHR  L +  ++ V+ G +D  I   L 
Sbjct: 296 DHRTELKITDVQGVMDGDLDPFIEAYLK 323


>gi|170070084|ref|XP_001869460.1| peptide chain release factor 1 [Culex quinquefasciatus]
 gi|167866004|gb|EDS29387.1| peptide chain release factor 1 [Culex quinquefasciatus]
          Length = 425

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 120/355 (33%), Positives = 195/355 (54%), Gaps = 15/355 (4%)

Query: 6   HKQICDLKNRFAEIE--LRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            K + +++  +  ++   +M++           +  A +S ++               L 
Sbjct: 71  QKYLENIRLEYYSLKVLEQMNKQDI--------KRMALLSHVVEMYEQRRIIVDNLSSLA 122

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  + + D       + E         + E     L +  + +D  S ILE+ AG GG 
Sbjct: 123 EMGAEKDEDMLQLMKEEKEAYTNILRKLDGEIMDGILSM-DEEEDYSSLILEVAAGVGGQ 181

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EA LF  ++F MY  +   + W++E+L + D + GG +     I+GR  +  +KFE+GVH
Sbjct: 182 EAMLFAREVFDMYCGFVEFKGWEIEMLQTEDTELGGIRHASMVINGRDAYRFLKFEAGVH 241

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQR+P+TE S R+HTS ATV+VLP   E  +++  +D++I+T RASG+GGQHVNTTDSA
Sbjct: 242 RVQRIPSTEKSARIHTSTATVSVLPRPDEFQIELKDKDLKIETKRASGAGGQHVNTTDSA 301

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI H+PTG+ V   +E+SQ +N+  A + L A+L   E +   N + + +K Q+GS  R
Sbjct: 302 VRIVHLPTGMAVECQTERSQGKNKEIAKQKLLAKLTQQELESKFNAKQSLKKSQVGSSTR 361

Query: 303 SERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +E+IRTYN+ Q RITDHR+   T + L+  ++G   + D++  L   H+ K +  
Sbjct: 362 NEKIRTYNYPQDRITDHRLEGGTTHNLKVFMEGGPPLGDMVEKLRKDHRKKQLKE 416


>gi|259502724|ref|ZP_05745626.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
 gi|259169369|gb|EEW53864.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
          Length = 332

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 107/334 (32%), Positives = 168/334 (50%), Gaps = 10/334 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    D   K  +     + +  K   Y   + +             + E     + E
Sbjct: 1   MAQPGFWDDNEKAQQLINDNNDLKEKRDTYVALRDQL--ADLETNLELLELEPDPDLEQE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
             A   +  E   +     L  +  D K+ ILEI  G GG+EA  +   L RMY R+A  
Sbjct: 59  FAASFAKTTEALQQYRLSQLLSEKYDGKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQ 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
               VE  +    +  G K +   I GR  F  ++ E GVHR+ R+   +++GR HTS A
Sbjct: 119 HGLTVETANYEPGEVAGVKSVTLLIKGRNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE    ++VDI   D+R+DT R+SG+GGQH+N T+SAVRITH+PTG++  + +E+
Sbjct: 179 SVDVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ  NR  AM +L+++LY++E ++ A ER+     Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWG---SQIRSYVFHPYTLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           D+R     +  + V+ G +D  IN  L    ++ 
Sbjct: 296 DNRSGYETHNGQAVMDGELDPFINAYLQWKLSQQ 329


>gi|210076204|ref|XP_504279.2| YALI0E22759p [Yarrowia lipolytica]
 gi|199426952|emb|CAG79876.2| YALI0E22759p [Yarrowia lipolytica]
          Length = 389

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 125/356 (35%), Positives = 189/356 (53%), Gaps = 14/356 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +   +   +  ++   S +       KL  +   +  +  ++  Y     +  +L ++  
Sbjct: 38  KAESMNKEYEALQA--SPNEDQFKDKKLIAKINLLGQVTHELDSYRNSIVQYDELMSMCD 95

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D     +  D         EK I++LE     LLLP     D  CI+E+R G GG EA L
Sbjct: 96  DPELKKDAEDEIPTVEAEAEKAIKKLET----LLLPTHPYGDIGCIIEMRPGIGGEEACL 151

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F  +L  MY  YA    W  ++ + + ND GG  E++ ++ G G ++ ++ E GVHRVQR
Sbjct: 152 FTDNLLNMYTGYADEMGWPYQITNVTRNDKGGITEVILSVDGEGSYNMLQHEGGVHRVQR 211

Query: 188 VPATEASGRVHTSAATVAVLPEAAE-----IDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           VP TE+SGRVHTSAA V VLP+ +E      D+     ++RID MRA G+GGQHVN T+S
Sbjct: 212 VPVTESSGRVHTSAAAVIVLPQISESSVAADDIQFAPGEVRIDVMRAQGAGGQHVNKTES 271

Query: 243 AVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+ HIPT  ++V  + +SQ QN+  A  +LR RL + +R+  A +    R  Q+ + D
Sbjct: 272 AVRLVHIPTKTMVVMQNSRSQRQNKEMAFMILRGRLAEQKRREQAAKSKNARTSQVSATD 331

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKMIGSAS 356
           RS++IRTYNF Q R+TDHR       L+ V+ G  +D ++  L    + + I    
Sbjct: 332 RSDKIRTYNFHQNRVTDHRCGY-SGNLDVVMSGKKLDAVLEALEDHFREESIKDLE 386


>gi|332140695|ref|YP_004426433.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550717|gb|AEA97435.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 248

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 95/248 (38%), Positives = 139/248 (56%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +    +D+  C ++I++G+GG+EA  +   L RMY R+     +K E++  SD D  G K
Sbjct: 1   MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                I G   F  ++ E+GVHR+ R    ++  R HTS ++  V PE  +         
Sbjct: 61  SATLRIQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQHVN TDSAVRITH PTGI+V   +++SQH+N+ +AMK L+A+LY+
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|124007003|ref|ZP_01691832.1| peptide chain release factor 2 [Microscilla marina ATCC 23134]
 gi|123987456|gb|EAY27176.1| peptide chain release factor 2 [Microscilla marina ATCC 23134]
          Length = 324

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 150/325 (46%), Gaps = 8/325 (2%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84
           +    D      +    I  I      +D+ +    +L  +     +             
Sbjct: 4   QPEFWDDPKAAEKVLKEIKSIKIWTERFDKVQNLWDELEILNEFLEAGEGSETEVTNLFS 63

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRK 144
            +EK + ELE +        D +D  + ++EI  G GG+E+  + G L RMY  +     
Sbjct: 64  KLEKALDELEFQKM----LSDEEDPLNALIEINPGAGGTESMDWAGMLMRMYIMWGEKNN 119

Query: 145 WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATV 204
           +KV  ++    +  G K +   I G   +  +K E GVHR+ R+   ++ GR HTS A+V
Sbjct: 120 YKVREVNYQAGEAAGVKSVTLEIEGDFAYGHLKAEIGVHRLVRISPFDSGGRRHTSFASV 179

Query: 205 AVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
              P     I+++I   DI  DT RA G+GGQ+VN  ++AVR+ H P+GI+V    E+SQ
Sbjct: 180 FAYPVVDDTIEIEISPADIEWDTFRAGGAGGQNVNKVETAVRLKHKPSGIIVECQQERSQ 239

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRI 321
            QN+ +AMK+LR+RLY VE ++    R+     +    D   +IR+Y       + D R 
Sbjct: 240 LQNKDKAMKMLRSRLYQVEMEKKNEARAKVEGSK-KRIDFGSQIRSYVLHPYKMVKDLRT 298

Query: 322 NLTLYKLEYVLQGYIDDIINPLLTA 346
                 ++ VL G + D +   L  
Sbjct: 299 GHERSDVQNVLDGDLSDYMKAFLMQ 323


>gi|297564871|ref|YP_003683843.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946]
 gi|296849320|gb|ADH62335.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946]
          Length = 375

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 171/346 (49%), Gaps = 9/346 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I   ++R  E+E+++++    D   +        + +   +  Y + + + Q L  +  
Sbjct: 28  DIAGKESRLRELEVKLNDPHLWDNPTEAKAISQEATRLRKAVENYRRLESDLQGLLELWP 87

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           + +++   +   +++    E        ++ +  L      + + I+ I+ G GG+EA  
Sbjct: 88  ELSAEERAQMQPELDKAGREL------EDLYHQTLLSFPYAENAAIVTIKPGAGGTEACD 141

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+A    +KVEV+      + G       + G   +  +  E+GVHR+ R
Sbjct: 142 WAEMLYRMYTRFAERHGFKVEVVDVEPGAEAGIDLAQFIVRGEYAYGLLSAEAGVHRLVR 201

Query: 188 VPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
                A G+  TS A + V+PE  E  +V I  ED+RID MR+ G GGQ VNTTDSAVR+
Sbjct: 202 PSPFNAQGKRQTSFAALEVMPEVDESVEVAINPEDLRIDVMRSQGKGGQGVNTTDSAVRV 261

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PTGIMV     +SQ +N+  AM +LR++L+++E K+   E +   K +    +   +
Sbjct: 262 VHLPTGIMVKCQITRSQQKNKELAMNILRSKLFEIEWKKKQEELARL-KGESRPNEWGSQ 320

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           IR+Y   +  + DHR     +  E VL G +++++   L     + 
Sbjct: 321 IRSYVLDKQYVKDHRTGEMRHDPENVLDGDLENLVWAGLEWKAGRR 366


>gi|126337707|ref|XP_001368579.1| PREDICTED: similar to Mitochondrial translational release factor 1
           [Monodelphis domestica]
          Length = 447

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 130/360 (36%), Positives = 203/360 (56%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K   DL   +  ++  +      D     ++  +A ++   +      + ++  +DL +
Sbjct: 75  QKYAEDLTGEYQRLDRLLHHVSVSDGDRRTMSRRHAELAQFTAIYKEIQESEKAIEDLES 134

Query: 65  VIGDHNSDSEIR--DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   E +  +LA  E   I+++I  L  E+   L+PK+ DD    ILE+ +G  T
Sbjct: 135 MCKSLNEQDEKQLLELAFEEREVIDQKINRLCQELFQSLVPKEKDDKSDVILEVTSGRTT 194

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W  E+L+ +  D GG     A ISG  V+  MK+E 
Sbjct: 195 GGDICQQFTKEIFEMYQSYSCYKGWNFEILNYTTADYGGLHHAAARISGDSVYEYMKYEG 254

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+D+ +  +D+RIDT RA G+GGQHV
Sbjct: 255 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDIRVEPKDLRIDTFRAKGAGGQHV 314

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVRI HIPTG++V    ++SQ QN+  A ++LRA+LY    ++  +++ + RKLQ
Sbjct: 315 NTTDSAVRIVHIPTGLVVECQQQRSQIQNKDTAFRLLRAKLYQQTIEKEQSKKQSVRKLQ 374

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TDHRI+     ++  L G   +D +I  LL +   + I  
Sbjct: 375 VGTRAQSERIRTYNFTQDRVTDHRISYEARDIKEFLCGGRPLDTLIQRLLVSANEEAIVE 434


>gi|39938959|ref|NP_950725.1| protein chain release factor B [Onion yellows phytoplasma OY-M]
 gi|39722068|dbj|BAD04558.1| protein chain release factor B [Onion yellows phytoplasma OY-M]
          Length = 369

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 169/341 (49%), Gaps = 7/341 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I        ++   M +        K        + +  K +  +  KQ   DL T+  
Sbjct: 25  DIKKTNQTIEKLNYAMQKEDFWKYPQKAVTISQQFNDLQDKKTTLETLKQNYLDLETLFN 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            + S ++   L + E+  + K +     +    +    + D  + IL    G GG+E+  
Sbjct: 85  LNESPNKTSALLEEELKNLTKAV----FDFKIKIFLNQSYDINNAILLFHPGAGGTESQD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   LFRMY++YA  + +K E+L     +  G K     I G   +  +K E GVHR+ R
Sbjct: 141 WCEMLFRMYQKYAQKKNFKTEILDYQPGEGAGIKSATLLIKGTYAYGYLKAEKGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +A+ + HTS     VLPE  E        ED++ID  R+SG+GGQHVNTTDSAVRI
Sbjct: 201 ISPFDANSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQHVNTTDSAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTG++V   +E+SQ +N+ +A+++L+ +L+ +  K+   E +   +          +
Sbjct: 261 THLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKKQKEENAKKFQSDQKENGWGSQ 320

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR+Y F     + DHR N  +++LE V+ G ID+ IN  LT
Sbjct: 321 IRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYLT 361


>gi|317504105|ref|ZP_07962107.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606]
 gi|315664777|gb|EFV04442.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606]
          Length = 376

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 163/376 (43%), Gaps = 36/376 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+  R                F E +LR       D   +   +   +  I 
Sbjct: 1   MITAEQLKDIIERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMKKVKGIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  Y+  ++   +L      +  +    +    +     K + +LE       + +  
Sbjct: 61  KWLKGYNACRELADELQLAFDFYKDNMVTEEEVDTDYAKAVKAVEDLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I +G GG+E+  +   L RMY+R++    + V+V    D D+ G K +  T
Sbjct: 117 EDAMDAVLKINSGAGGTESQDWAQMLMRMYQRWSESHGYNVKVTDIQDGDEAGIKSVTMT 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
           I G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 IEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM +L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMLLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR       ++ V+ 
Sbjct: 297 QLYDRALKKKQAEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTGFQTSDVDAVMD 353

Query: 334 GYIDDIINPLLTAHQA 349
           G +D  I   L    A
Sbjct: 354 GKLDGFIKAYLMEFAA 369


>gi|322435983|ref|YP_004218195.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9]
 gi|321163710|gb|ADW69415.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9]
          Length = 375

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 101/351 (28%), Positives = 181/351 (51%), Gaps = 18/351 (5%)

Query: 12  LKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           L+   A +E ++++        +   L  +   +  +++  +   ++  + +    +  +
Sbjct: 28  LRRELAIVEEKIADPTVWADAARSQPLMRDRKRLETLLADDAELARRSDDIEAYFELAKE 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                        +++     + E  +++    +     D  + I+ +  G GG+E+  +
Sbjct: 88  GEDTE-------PDLVREIPALVEYADQLESKTMLSGETDLLNAIVTVHPGAGGTESQDW 140

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++KVE+    D D+ G K    TISG   F  +  E+GVHR+ R+
Sbjct: 141 AEMLMRMYIRWGERQRFKVEINEIQDGDEAGIKSATFTISGEFAFGLLSGETGVHRLVRI 200

Query: 189 PATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ R HTS A+V V PE  +   +DI +ED+RIDT R+ G GGQHVNTTDSAVRIT
Sbjct: 201 SPFDSAKRRHTSFASVFVSPEIDDTIVIDIKVEDLRIDTYRSGGKGGQHVNTTDSAVRIT 260

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRSE 304
           H+PTG++    +E+SQH+N+ RAMK++R++LY+ E  +      +  + KL+IG G    
Sbjct: 261 HLPTGLVTGCQNERSQHKNKERAMKMMRSKLYEYELDKKKAATRKIEDSKLEIGFG---S 317

Query: 305 RIRTYNFSQGRI-TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           +IR+Y     R+  D R  + +  ++ VL G ++  I   L   +   + +
Sbjct: 318 QIRSYVLQPYRMAKDLRTRVEVGDVDKVLDGDLEPFIRGFLRMRREGNLPA 368


>gi|261342293|ref|ZP_05970151.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315634|gb|EFC54572.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC
           35316]
          Length = 293

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 162/297 (54%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAV-----AELDVLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   I G   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLTRMYLRWAEARGFKTEIIEESEGEVAGLKSVTIKIIGDYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVNDDIDIEINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTG++    +++SQH+N+ +AMK ++A+LY++E ++   E+  
Sbjct: 178 GGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|237740862|ref|ZP_04571343.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13]
 gi|229431159|gb|EEO41371.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13]
          Length = 331

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 116/332 (34%), Positives = 168/332 (50%), Gaps = 11/332 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E    E        K +E    ++   + +S Y++   E  D   +I    S     +  
Sbjct: 2   EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDFVESGEASFENE 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I K       E    LL     D  + I+ I +G GG+EA  +   L+RMY R+
Sbjct: 62  LQTKHKILKSD---IEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRW 118

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
             L+ +KV  L   + D  G K +   + G   +  +K E GVHR+ R+   +A+ + HT
Sbjct: 119 CNLKGYKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHT 178

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE  E  +V+I   DIRIDT RASG+GGQHVN TDSAVRITH P+GI+V   
Sbjct: 179 SFASVEVVPEVDENVEVEINPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQ 238

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG- 314
            E+SQ  NR  AMK+L+++L ++E K+   E       +  IG G+   +IR+Y F    
Sbjct: 239 KERSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGN---QIRSYVFQPYA 295

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + DHR N  +  ++ V+ G IDD IN  L  
Sbjct: 296 LVKDHRTNTEIGNVKAVMDGSIDDFINSYLRW 327


>gi|315452804|ref|YP_004073074.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179]
 gi|315131856|emb|CBY82484.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179]
          Length = 363

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 180/341 (52%), Gaps = 15/341 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L++    +E   S+        +     +E   I  ++S          E ++L  ++
Sbjct: 27  ESLQDTLTALEREQSDPLFWQDKERAASKNQEKVKIERLLSAYQNAKNTLVEARELFELV 86

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              N D         +   ++  ++ LE  +         D     I+ I+ G GG E+ 
Sbjct: 87  Q--NDDPSTLAQLFEDAPHLQACVQSLEVGVMLANAHDGRDA----IVSIQPGVGGVESQ 140

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  + +KVE+L   + ++ G K +   I G  V+  MK E+GVHR+ 
Sbjct: 141 DWGSMLYRMYLRWAERKGFKVELLDYQEGEEAGIKGVAFIIRGINVYGYMKNENGVHRLV 200

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+    A+G+ HTS A+V V P    +ID+ I  +DIRIDT RASG+GGQHVN T+SA+R
Sbjct: 201 RMSPFNANGKRHTSFASVQVSPEVDDDIDIVIEDKDIRIDTYRASGAGGQHVNKTESAIR 260

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH+ TGI+V   +++SQH+N+  A+K+L++RLY++E  R   + SA  K +IG G    
Sbjct: 261 ITHLATGIVVQCQNDRSQHKNKAMALKMLKSRLYELELHRQKEQSSAEEKSEIGWG---H 317

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           +IR+Y  +   +I D R  +    +E +L G +D ++  +L
Sbjct: 318 QIRSYVLAPYQQIKDARSEIAYSNVEAILDGDLDAMMEAVL 358


>gi|319407240|emb|CBI80879.1| peptide chain release factor RF-2 [Bartonella sp. 1-1C]
          Length = 333

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 108/337 (32%), Positives = 161/337 (47%), Gaps = 16/337 (4%)

Query: 29  VDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLA 85
            +   K      E   +   ++   ++ Q  +E  +L  +  + N    I +        
Sbjct: 3   WNDARKAQDMMRERQNLEDSMNSTQLFTQTLEECIELIAMGEEENDVEIITEAENTIRQL 62

Query: 86  IEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKW 145
             +  +          L     D     LEI AG GG+E+  +   L RMY R+A   K 
Sbjct: 63  KSEIDK-----KQIATLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKM 117

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KVEVL + D ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS A++ 
Sbjct: 118 KVEVLETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIW 177

Query: 206 VLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQH 263
           V P   E  ++D+   D+RIDT RASG+GGQHVNTTDSAVRITHI T I+V   +E+SQH
Sbjct: 178 VYPVVDENIEIDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTDIVVQCQTERSQH 237

Query: 264 QNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHR 320
           +N+  A  +LRARLY+ E K+     +     K +IG G    +IR+Y     + + D R
Sbjct: 238 KNKATAWSMLRARLYEEELKKREEATNAVEASKTEIGWG---HQIRSYVLQPYQLVKDLR 294

Query: 321 INLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
             +     + VL G +D  I   L            +
Sbjct: 295 TGVENTDPQTVLNGDLDTFIEAALAQRVHGKKQELKD 331


>gi|295134177|ref|YP_003584853.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
 gi|294982192|gb|ADF52657.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
          Length = 365

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 28/365 (7%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+  R   +                E +  +    D   +  E    +    
Sbjct: 1   MITTDQVKDITTRIDNLQVHLNIEQKQIEIQNEEEKTFDPSFWDNPSEAEEFMKTLKGKK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             ++ Y+  K   ++L  ++  +N           +   I   + ELE    +  +  + 
Sbjct: 61  KWVNDYNVAKSGLEELQVLLEFYNEGEAEESDVIKQYQKILDVVEELE----FKNMLSEE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            DD S +L+I AG GG+E+  +   L RMY  +A  + +K++ L+  + D  G K +   
Sbjct: 117 GDDLSAVLQITAGAGGTESCDWAQMLMRMYLMWAEKQGFKIKELNYQEGDVAGIKTVTLE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I+++I   DI I 
Sbjct: 177 IEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEINPADIEIT 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+SG+GGQ+VN  ++ V++ H PTGI +  S  +SQH NR RAM++L+++LY++E ++
Sbjct: 237 TARSSGAGGQNVNKVETKVQLVHHPTGIQISCSETRSQHDNRNRAMQMLKSQLYEIELEK 296

Query: 285 MANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341
              +R      K +I  G    +IR Y     + + D R       ++ V+ G+ID  + 
Sbjct: 297 QREQREDIEASKKKIEWG---SQIRNYVMHPYKLVKDVRTAEETGNVDSVMDGHIDQFLK 353

Query: 342 PLLTA 346
             L  
Sbjct: 354 AYLMM 358


>gi|304311879|ref|YP_003811477.1| Peptide chain release factor 2 [gamma proteobacterium HdN1]
 gi|301797612|emb|CBL45833.1| Peptide chain release factor 2 [gamma proteobacterium HdN1]
          Length = 300

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 104/305 (34%), Positives = 166/305 (54%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  I     + +  ++L  ++ + N +S + D+ +          +       +  +   
Sbjct: 2   VGTIDSVSTRLRGARELLDMVVEENDESMLGDVQKEIDGIEADVAKM-----EFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  SC L+I+AG+GG+EA  +   L RMY R+     +K E++  S  +  G K    
Sbjct: 57  ETDANSCYLDIQAGSGGTEAQDWADMLLRMYLRWGEDHGFKTELVEVSAGEVAGIKSATI 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   F  ++ E+GVHR+ R    ++  R HTS ++V V PE  +   ++I   D+++
Sbjct: 117 HLEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIHIEINPADLKV 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN T+SA+RITH+P+GI+V   S++SQH+NR +AMK LR++LY++E +
Sbjct: 177 DTYRASGAGGQHVNRTESAIRITHVPSGIVVQCQSDRSQHKNRDQAMKQLRSKLYEMEMQ 236

Query: 284 RMANE--RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   E  R  + K+ IG G    +IR+Y   Q R+ D R N+     E VL G ID  I 
Sbjct: 237 KRYVEKMRQEDSKMDIGWG---SQIRSYVLDQSRVKDLRTNVETSNTEAVLDGEIDLFIK 293

Query: 342 PLLTA 346
             L A
Sbjct: 294 ASLKA 298


>gi|239995055|ref|ZP_04715579.1| Protein chain release factor B, RF-2 [Alteromonas macleodii ATCC
           27126]
          Length = 248

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 92/248 (37%), Positives = 139/248 (56%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +    +D+  C ++I++G+GG+EA  +   L RMY R+     +K E++  S+ +  G K
Sbjct: 1   MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSEGEVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                + G   F  ++ E+GVHR+ R    ++  R HTS ++  V PE  +         
Sbjct: 61  SATLRVQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIEINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQHVN TDSAVRITH PTGI+V   +++SQH+N+ +AMK L+A+LY+
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|57239093|ref|YP_180229.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161172|emb|CAH58086.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 367

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 176/347 (50%), Gaps = 18/347 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I +L +   ++  + +++   +       +  E A IS I+   +  +++ Q   +L +
Sbjct: 26  DIDNLTSLLVDLNTKCADTSLWNDNLTAHHVLSERARISKIVGLFTELEEEYQYYNELLS 85

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           VI      S   D    ++    + ++E   +     L  D  D   C +EI++G GG+E
Sbjct: 86  VI------SNDSDSLLDDLSKGLEALKEKVKKKEVECLFSDEADQNDCFIEIQSGAGGTE 139

Query: 125 AALFVGDLFRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +  +   L RMY R+A     +K +V+   D ++ G K  +  + G   +   K ESG+H
Sbjct: 140 SNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGVKSAIIKVIGYNAYGWSKTESGIH 199

Query: 184 RVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+    ++ + HT+ A+V V P      D+ I  +D+RIDT RASG+GGQHVN T+S
Sbjct: 200 RLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHDKDLRIDTYRASGAGGQHVNKTES 259

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGS 299
           AVRITHIP+GI+V   + +SQHQN   A  +LR+RLY ++ +    + +    ++  IG 
Sbjct: 260 AVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLYQLKLQEKEKKMAQEHSQRCDIGW 319

Query: 300 GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           G+   +IR+Y     + + D R       +  VL G +D  I   LT
Sbjct: 320 GN---QIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDAFIIATLT 363


>gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977]
 gi|238688924|sp|B1MLV1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium
           abscessus]
          Length = 356

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 141/336 (41%), Positives = 192/336 (57%), Gaps = 17/336 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTV 65
           I  +    AE+E ++++           +       +SPI++        + +      +
Sbjct: 7   IDAMLAEHAELEKQLADPALHADAAAARKAGRRFAMLSPIVATHRKLATARDDLATAREL 66

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D  S ++            E  I ELE +++ +L P+D  D    +LE+++G GG E+
Sbjct: 67  SADDPSFADEVTEL-------ESSIAELETQLSDMLAPRDPHDGDDILLEVKSGEGGEES 119

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-----SGRGVFSRMKFES 180
           ALF  DL RMY RYA    WKV VL  +++D GGYK+    I     S  GV+SR+KFE 
Sbjct: 120 ALFAADLARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKFEG 179

Query: 181 GVHRVQRVPATEASGRVHTSAATV-AVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           GVHRVQRVP TE+ GRVHTSAA V          ++ I   D+RID  R+SG GGQ VNT
Sbjct: 180 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEEIQIDESDLRIDVYRSSGKGGQGVNT 239

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVRITH+PTGI+V   +E+SQ QN+ RAM+VL ARL  +  ++   + SA R  QI 
Sbjct: 240 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAQADASAGRASQIR 299

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           + DRSERIRTYNF + RITDHR+    + L+ VL G
Sbjct: 300 TVDRSERIRTYNFPENRITDHRVGFKAHNLDQVLDG 335


>gi|269140268|ref|YP_003296969.1| protein chain release factor B [Edwardsiella tarda EIB202]
 gi|267985929|gb|ACY85758.1| protein chain release factor B [Edwardsiella tarda EIB202]
          Length = 289

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 97/294 (32%), Positives = 156/294 (53%), Gaps = 12/294 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++   L  +  + + +    +       A    +     ++ +  +     D   C L+I
Sbjct: 2   EDVSGLLELAVEADDEETFNEAV-----AELDLLDVKLGQLEFRRMFSGEYDSADCYLDI 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K E++  S+ +  G K     ISG   +  +
Sbjct: 57  QAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQ 235
           + E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+GGQ
Sbjct: 117 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVN T+SAVRITHIPTG++    +++SQH+N+ +AMK ++A+LY++E ++   ER    +
Sbjct: 177 HVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            K  IG G    +IR+Y     RI D R ++     + VL G +D  I   L A
Sbjct: 237 TKSDIGWG---SQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 287


>gi|254456112|ref|ZP_05069541.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083114|gb|EDZ60540.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 326

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 105/332 (31%), Positives = 171/332 (51%), Gaps = 16/332 (4%)

Query: 23  MSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M E+      +    + +E      +++      +K  +  D+  +  +  + +  +++ 
Sbjct: 1   MLEANFWQDKNNSKNIIKEKKLYEDLLNIHKASIEKLIDLNDISELAAEEENQAVQKEIL 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                   K++R+L           +  D   C +EI AG GG+E+  +   L RMY ++
Sbjct: 61  -----QNIKDLRDLVKTNEIKCFLSNETDSLDCYIEIHAGAGGTESQDWAEMLRRMYLKW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +K  ++S    D+ G K     I G  VF  +K ESG+HR+ R+   ++  R HT
Sbjct: 116 ADQKNFKSNLISEHKGDEAGIKSSTIKIEGDYVFGWLKKESGIHRLVRISPFDSGARRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A++ V P   E  +++I  +D+RIDT R+SG+GGQHVNTTDSAVRITHIP+ I+V   
Sbjct: 176 SFASIWVYPVVDENINIEIIEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPSKIVVQCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR 315
           +E+SQH+N+   + +L+ARLYD E K+   +     N K +IG G    +IR+Y     R
Sbjct: 236 NERSQHKNKETCINMLKARLYDYEIKKKEQKNQNTENSKSEIGWG---HQIRSYVLQPYR 292

Query: 316 -ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + D+R N      + +L G ID  +   L  
Sbjct: 293 LVKDNRTNFESTNPDKILDGEIDGFLEQSLYQ 324


>gi|255074407|ref|XP_002500878.1| predicted protein [Micromonas sp. RCC299]
 gi|226516141|gb|ACO62136.1| predicted protein [Micromonas sp. RCC299]
          Length = 428

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 21/361 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKI---SIYDQKKQEEQDLHT 64
            +  L    A+++   SE    D  IK     A ++    ++     ++    +      
Sbjct: 55  DVERLAATVADLDAAASEGTLWDDPIKAKAVMAELADAKEQLATARGFENLLGDAAVALE 114

Query: 65  VIGDHNSDSE------------IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           +I     D                     E+      +    ++     L     D    
Sbjct: 115 MIDAEREDDSLSGAAANDASAGPDPTILAELSDACDNLERQLDKWEVRRLLGGKYDAMPA 174

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
           ++ + AG GG++A  +   L RMY  +   R +    +  S+ ++ G K +   + GR  
Sbjct: 175 LVNVYAGAGGTDAQDWAEMLERMYRGWCNSRGFTWRTVERSEGEEAGLKSVTFEVQGRFA 234

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVA---VLPEAAEIDVDIPLEDIRIDTMRA 229
           +  ++ E G HR+ R    +      TS A V    VL E +  ++ +   D+ I TMR+
Sbjct: 235 YGYLRSERGTHRLVRQSPFKKDATRQTSFAAVEVTPVLDEGSVEELTLRDSDLEISTMRS 294

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
            G+GGQ+VN  ++AVRI H+PTGI V    E+SQ  N+ + +  L+A+L  V  ++ A +
Sbjct: 295 GGAGGQNVNKVETAVRIKHVPTGITVRCEEERSQAANKAKGLARLKAKLVAVAEEQRAAD 354

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +A R   +   +  ++IR Y F     + D R       ++ V+ G +D+ ++  L   
Sbjct: 355 VAAIRGDAVR-AEWGQQIRNYVFHPYKMVKDVRTGKETSDVDGVMSGDLDEFMDEFLRWK 413

Query: 348 Q 348
           +
Sbjct: 414 R 414


>gi|146328937|ref|YP_001209831.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A]
 gi|146232407|gb|ABQ13385.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A]
          Length = 305

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 104/301 (34%), Positives = 158/301 (52%), Gaps = 13/301 (4%)

Query: 52  YDQKKQEEQDLHTV--IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
            D   Q   D   +  + +  +D E+   A++++  ++K +  LE    +  +     D 
Sbjct: 8   LDNIHQGLNDARELMALAEDENDEELVQSARLDIERLQKSVEILE----FRRMFSGELDA 63

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
            +  L+I++G+GG+EA  +   L RMY R+   + +  E+L  +  D  G K      +G
Sbjct: 64  NNAFLDIQSGSGGTEAQDWAEMLERMYLRWGEAKGFTTELLEETPGDVAGIKSATIRFTG 123

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMR 228
              +  +K E GVHR+ R    +A+ R HTS A V V PE  + I++DI   D+RID  R
Sbjct: 124 EYAYGWLKTEIGVHRLVRKSPFDANNRRHTSFAAVFVSPEIDDAIEIDINPADLRIDVYR 183

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG+GGQHVN T+SAVRITH+PTG +V +   +SQHQN+   M+ LRA+LY +E  + + 
Sbjct: 184 ASGAGGQHVNRTESAVRITHLPTGTVVQSQDSRSQHQNKQTCMRHLRAKLYQLELHKRSE 243

Query: 288 ERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
                 + K  IG G+   +IR+Y   Q RI D R        + VL G +D  I   L 
Sbjct: 244 SAQALEDSKSDIGWGN---QIRSYVLDQQRIKDLRTGYETSNTQAVLDGDLDPFIQESLK 300

Query: 346 A 346
            
Sbjct: 301 Q 301


>gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 322

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 105/317 (33%), Positives = 161/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   ++  I  +   +   ++  +L  +         + +         E+       
Sbjct: 1   MRERTLLANQIEGVQKLEGDVRDTIELVELAEMEGDGDVVAEGVLALRALAEEA-----K 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D   C LE+ AG GG+EA  +   L RMY R+A    +KV ++ SS+ 
Sbjct: 56  RRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTLMESSEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           +  G K     +SG   +  +K E+GVHR+ R+   +A+ R  TS A+V V P     I+
Sbjct: 116 EQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DT RASG+GGQHVN T+SA+RITHIPTGI+V   +++SQH+NR  AM +L
Sbjct: 176 IDINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +AR+Y+ E +R   A  ++   K  IG G    +IR+Y  +  + + D R N+       
Sbjct: 236 KARMYEQELQRREAAAAQTEAAKTDIGWG---HQIRSYVLAPYQLVKDLRTNMEKTNPGA 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +DD +   L A 
Sbjct: 293 VLDGDLDDFMAASLAAQ 309


>gi|262341278|ref|YP_003284133.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272615|gb|ACY40523.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 361

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 137/348 (39%), Positives = 215/348 (61%), Gaps = 12/348 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI---ISKISIYDQKKQEEQDLH 63
           +++   K  F EI   + +   +    K          +   +S    Y++K    Q+  
Sbjct: 8   QKLEGSKKEFYEISKSIIQPNIISDQKKYKILLKKYLKLEKIVSLYEKYNKKLALLQEAD 67

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP------KDTDDDKSCILEIR 117
            ++  ++SD+++++LA IE   I + +  +E E   L+        + T++ ++ I+E+R
Sbjct: 68  FILK-NDSDADLKELASIEKYKILENLSSIEKESYDLIFSLSNETEETTENHRNAIVELR 126

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-VFSRM 176
           +GTGG EA LFV D+ RMY  Y     WK +++ +      GYKEI+  ++G+  V+  +
Sbjct: 127 SGTGGDEACLFVEDILRMYTMYFKKSGWKYKIIHAQKGGIKGYKEIILDVNGKEGVYGNL 186

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           KFESGVHRVQR+P TE+ GRVHTSA TVAVLP+  +I+V+I L DI+ +T R+SG+GGQH
Sbjct: 187 KFESGVHRVQRIPKTESQGRVHTSAITVAVLPQVKDIEVNINLSDIKKETFRSSGAGGQH 246

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SAVR+TH+P+ I V    E+SQH+N  +A+ VLR+R+Y  E+++   E S  RK 
Sbjct: 247 VNKTESAVRLTHLPSKITVECQEERSQHKNFEKAINVLRSRIYQNEKEKRLKEISIKRKS 306

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPL 343
            + +GDRS +IRTYN+ + R+TDHRI+ ++Y L   + G I ++IN L
Sbjct: 307 LVSTGDRSVKIRTYNYPKSRVTDHRIHKSIYDLAGFMNGNIQEMINFL 354


>gi|296104552|ref|YP_003614698.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059011|gb|ADF63749.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 293

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 162/297 (54%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAV-----AELDVLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   I G   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIEINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTG++    +++SQH+N+ +AMK ++A+LY++E ++   E+  
Sbjct: 178 GGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|51598335|ref|YP_072523.1| peptide chain release factor 2 [Borrelia garinii PBi]
 gi|51572906|gb|AAU06931.1| peptide chain release factor 2 [Borrelia garinii PBi]
          Length = 350

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 180/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++++  + E  + +    +   +  E   A S + +KI  +++   + +DL  +    
Sbjct: 14  KEIQDKIEKYEKEIHQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDLCEIV 73

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +I  L     +  ++    L          K+  D  S  L I +G GG+EA  +V
Sbjct: 74  ENEKDINSLEIEFNVLEKQYKNLLTI-----SYFKEELDINSAFLTIHSGAGGTEACDWV 128

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K I   I G   +  +K E G+HR+ R+ 
Sbjct: 129 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSITIEIKGEYAYGLLKSEVGIHRLIRIS 187

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 188 PFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 247

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  + +  K +I  G+   +
Sbjct: 248 IETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQEVKKEISWGN---Q 304

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 305 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 346


>gi|320535245|ref|ZP_08035369.1| peptide chain release factor 2 [Treponema phagedenis F0421]
 gi|320147898|gb|EFW39390.1| peptide chain release factor 2 [Treponema phagedenis F0421]
          Length = 320

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 161/316 (50%), Gaps = 15/316 (4%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQIEVLAIEKEIRELENE 96
            + +  + S++  + + + + +DL  +  + +   D ++ D        + +   +L   
Sbjct: 1   MSELKVLRSRVEPWRELQTDIEDLQALYDLAEEAEDEQMTDEIDSVYQKLSERFEKLNVL 60

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
                      D     L I AG GG+EA  +   L RMY R+A    +K E L   + D
Sbjct: 61  HL----LSGEVDANDAFLTIHAGAGGTEACDWAQMLTRMYLRWAERNDYKTETLDMLEAD 116

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDV 215
            GG K I   +SG   F  +K E+G+HR+ R+   +++ R HTS  +V V P     I+V
Sbjct: 117 -GGIKSITLKVSGEYAFGFLKGENGIHRLVRISPFDSNARRHTSFTSVYVFPVLDDTIEV 175

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           +I  ED+R+DT RA G+GGQHVN TDSAVR+TH+PTGI+V   +E+SQ  NR  AM +L+
Sbjct: 176 EIRPEDLRVDTYRAGGAGGQHVNKTDSAVRLTHLPTGIVVACQNERSQISNRATAMAILK 235

Query: 275 ARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYV 331
           ARLY+  R+    +    A  K  I  G+   +IR+Y F     + DHR       ++ V
Sbjct: 236 ARLYEYYREEKEKDNQKFAAEKKDISWGN---QIRSYVFQPYTMVKDHRTKYETGNIQAV 292

Query: 332 LQGYIDDIINPLLTAH 347
           + G ID  +   L  +
Sbjct: 293 MDGDIDGFMEEYLQKN 308


>gi|312147930|gb|ADQ30589.1| peptide chain release factor 2 [Borrelia burgdorferi JD1]
          Length = 358

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  E   A S + +KI  +++   + +DL  +    
Sbjct: 22  NEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDLCEIA 81

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +   L        ++    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 82  ENEKDTNGLEIEFNTLEKQYKDLLTI-----SYFKEELDANNAFLTIHSGAGGTEACDWV 136

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 137 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 195

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 196 PFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 255

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +
Sbjct: 256 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---Q 312

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 313 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 354


>gi|300869767|ref|YP_003784638.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
 gi|300687466|gb|ADK30137.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
          Length = 312

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +   I  I    +      +L  +  + N     ++L    +   +        
Sbjct: 1   MKERMLLLDKIEPIENLIKNANNIYELVEMAIESNDTEMEKELETECIELQKVFNE---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L     D K+  L + AG GG+E+  +   L RMY R+     + VE       
Sbjct: 57  -LETKNLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           D+ G K+I   + G   +  ++ E GVHR+ R+   +A+ + HTS   V+V+P+  E  +
Sbjct: 116 DEAGIKQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V+I   D+RIDT RASG+GGQHVN T SA+RITHIPT I+V   +E+SQH N+  AMK+L
Sbjct: 176 VEINQADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKML 235

Query: 274 RARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +A+LY +E++++  E+      K  I  G+   +IR+Y F   + + D R       +  
Sbjct: 236 KAKLYQLEKEKLDKEKQKIAGEKTDIAWGN---QIRSYVFQPYQMVKDLRTGHETGNMNS 292

Query: 331 VLQGYIDDIINPLLTAH 347
           V+ G ID+ I+  L   
Sbjct: 293 VMDGNIDEFISAYLKQQ 309


>gi|304389757|ref|ZP_07371716.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326933|gb|EFL94172.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 376

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 6/345 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
             L  + A++  + +     D      +   ++S   + +    + +    D+  ++   
Sbjct: 28  ELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQKMRARIDDMEALVELG 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                E RD    +     + +++  + +    L     D++  ++ IR+G GG +AA F
Sbjct: 88  AEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAVVTIRSGAGGVDAADF 147

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RY     +  +VL +S  ++ G K +   +     +  +  E+G HR+ RV
Sbjct: 148 AQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAYGMLSVEAGTHRLARV 207

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS A V V+P       +++P  DI+ID  R+SG GGQ VNTTDSAVR+T
Sbjct: 208 SPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGPGGQSVNTTDSAVRLT 267

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+++   EKSQ QNR  AM+VL++RL  +  ++  +++         S    +++
Sbjct: 268 HLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKELAGDVKAS--WGDQM 325

Query: 307 RTY-NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R+Y  + Q  + D R        + V  G +D  I+  +   + +
Sbjct: 326 RSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRKHQ 370


>gi|118088382|ref|XP_419682.2| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Gallus gallus]
          Length = 394

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 142/318 (44%), Positives = 213/318 (66%), Gaps = 5/318 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            + ++I     K++E QD   +     S+ ++R LA+ E+++ E+EI EL+++I  LL+P
Sbjct: 75  ELAARIQRLRDKERELQDTRELALQDESE-DLRKLAEREIVSCEEEIAELKHQIVLLLIP 133

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ++E+ AG GG EA LF  ++F MY RYAA +KWK E+L    ++ GG +  
Sbjct: 134 SEETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHA 193

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
           VA+I+G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  E+++ I  +D+R
Sbjct: 194 VASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEMELKINPKDLR 253

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           I+T RASG+GGQHVNTTDSAVRI HIPTG+      E+SQ +N+ +AM++L A+LY+++ 
Sbjct: 254 IETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQMLCAKLYNIKL 313

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +    +R++ RK+QIG+  RSE+IRTYNF Q RITDHRI+ +++  E  + G   +D++I
Sbjct: 314 EEENKKRNSARKIQIGTKGRSEKIRTYNFPQDRITDHRISRSVHHTECFMLGEEMLDEMI 373

Query: 341 NPLLT-AHQAKMIGSASE 357
             L   A    ++   SE
Sbjct: 374 KTLKEYADYESLMEIISE 391


>gi|312149296|gb|ADQ29367.1| peptide chain release factor 2 [Borrelia burgdorferi N40]
          Length = 359

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ +  + E  +++    +   +  E   A S + +KI  +++   + +DL  +    
Sbjct: 23  NEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDLCEIA 82

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ +   L        ++    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 83  ENEKDTSGLEIEFNTLEKQYKDLLTI-----SYFKEELDANNAFLTIHSGAGGTEACDWV 137

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 138 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 196

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITH
Sbjct: 197 PFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 256

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSER 305
           I TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +
Sbjct: 257 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---Q 313

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 314 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 355


>gi|307941920|ref|ZP_07657273.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
 gi|307774826|gb|EFO34034.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
          Length = 322

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 109/317 (34%), Positives = 156/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +   +Q   +  +L  +       S I+D         +K       
Sbjct: 1   MRERQQLDDGINGVKGLEQDLADNMELIELGELEGDQSVIKDAEDALRGLKDKVNE---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L     D     LEI +G GG+E+  +   L RMY R+A  R +KVE+L   D 
Sbjct: 57  -LQLQSLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGFKVELLEYHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  MK ESGVHR+ R+   +++ R HTS ++  V P     I+
Sbjct: 116 EEAGIKSATLLIKGENAYGWMKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +++   D RIDT RASG+GGQHVNTTDSAVRITH PTGI+V   SE+SQH+NR  A  +L
Sbjct: 176 IEVNESDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +ARLY+ E K+     +A    K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 KARLYEQELKKREEAANAEAAGKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTSPGD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGALDPFMEAALAQR 309


>gi|298346504|ref|YP_003719191.1| peptide subunit release factor RF2 [Mobiluncus curtisii ATCC 43063]
 gi|298236565|gb|ADI67697.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 43063]
          Length = 376

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 6/345 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
             L  + A++  + +     D      +   ++S   + +    + +    D+  ++   
Sbjct: 28  ELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQKMRARIDDMEALVELG 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                E RD   ++     + ++   + +    L     D++  ++ IR+G GG +AA F
Sbjct: 88  AEESGEDRDAILVDAEQTYETLKRDLDAMEVKTLLNGEYDERFAVVTIRSGAGGVDAADF 147

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RY     +  +VL +S  ++ G K +   +     +  +  E+G HR+ RV
Sbjct: 148 AQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAYGMLSVEAGTHRLARV 207

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS A V V+P       +++P  DI+ID  R+SG GGQ VNTTDSAVR+T
Sbjct: 208 SPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGPGGQSVNTTDSAVRLT 267

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+++   EKSQ QNR  AM+VL++RL  +  ++  +++         S    +++
Sbjct: 268 HLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKELAGDVKAS--WGDQM 325

Query: 307 RTY-NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R+Y  + Q  + D R        + V  G +D  I+  +   + +
Sbjct: 326 RSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRKHQ 370


>gi|296128915|ref|YP_003636165.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109]
 gi|296020730|gb|ADG73966.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109]
          Length = 392

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 143/351 (40%), Positives = 200/351 (56%), Gaps = 22/351 (6%)

Query: 7   KQICDLKN---RFAEIELRMSESPS---VDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +Q+  ++      A+IE  +++           +L   YA +  ++     +     +  
Sbjct: 31  EQLDAVEAMLAEHAQIERDLADPAVHADAARARRLGRRYAELGRVVQAYRQWRAAADDA- 89

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
                       +        EV A++    E    ++ +L+P+D DD +  ILEI+AG 
Sbjct: 90  ------QAAAELAAEDASFATEVPALQAAADEAAERLHRVLVPRDPDDGRDVILEIKAGE 143

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVF 173
           GG E+ALF GDL RMY RYA  + W V+VL ++++D GG K+    +          GV+
Sbjct: 144 GGEESALFAGDLLRMYTRYAERQGWSVQVLDATESDLGGVKDAQVAVKARAAGPPEDGVW 203

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
           + +K+E GVHRVQRVP TE+ GR+HTSAA V V PE   + DVDI   D+RID  R+SG 
Sbjct: 204 AHLKYEGGVHRVQRVPVTESQGRIHTSAAGVMVFPEADDDGDVDIDQNDLRIDVYRSSGP 263

Query: 233 GGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQ VNTTDSAVRITH+PTGI+V+  +EKSQ QNR +AM+VLRARL    ++  A   S 
Sbjct: 264 GGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAASE 323

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINP 342
            R+ Q+ + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I  
Sbjct: 324 ARRSQVRTVDRSERIRTYNFPENRIADHRTGYKAYNLDQVLDGDLGPVIAS 374


>gi|303236882|ref|ZP_07323461.1| putative peptide chain release factor 2 [Prevotella disiens
           FB035-09AN]
 gi|302483050|gb|EFL46066.1| putative peptide chain release factor 2 [Prevotella disiens
           FB035-09AN]
          Length = 371

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 20/351 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   K  F E +LR       +   +  E+   +  I   I  Y+  K +  +L      
Sbjct: 23  IDKKKIEFEEEQLRTQAPDFWEDAERAQEQMKKVKGIEKWIKGYENVKTQADELQLAFDF 82

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           +  +    +        +  +I  LE         +  +D   C+++I +G GG+E+  +
Sbjct: 83  YKDELVTEEDVDTAYAKVITDIENLELMNM----LRQEEDPMECVMKINSGAGGTESQDW 138

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-RGVFSRMKFESGVHRVQR 187
              L RMY RY     +KV +    + D+ G K +     G    F  +K E+GVHR+ R
Sbjct: 139 ASMLMRMYMRYGEQHGYKVTIADIQEGDEAGIKSVTMKFEGGEYAFGFLKSENGVHRLVR 198

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V    A G+  TS A+V V P     I+V +    +  DT R+ G+GGQ+VN  +S VR+
Sbjct: 199 VSPFNAQGKRMTSFASVFVSPLIDDTIEVFVDPARVSWDTFRSGGAGGQNVNKVESGVRL 258

Query: 247 THIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKL 295
            ++            ++  +  + Q +NR +AM++L+++LYD   K+    ++     K 
Sbjct: 259 RYMYQDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEAQAKVEASKK 318

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +I  G    +IR+Y F   R+ DHR N     ++ V+ G ID  I   L  
Sbjct: 319 KIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMDGKIDGFIKAYLME 366


>gi|107103215|ref|ZP_01367133.1| hypothetical protein PaerPA_01004284 [Pseudomonas aeruginosa PACS2]
 gi|254236611|ref|ZP_04929934.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719]
 gi|313109107|ref|ZP_07795079.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           39016]
 gi|126168542|gb|EAZ54053.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719]
 gi|310881581|gb|EFQ40175.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           39016]
          Length = 300

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 100/305 (32%), Positives = 159/305 (52%), Gaps = 12/305 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           +  +        + +DL  +  + + +  + D+A       E   +     + +  +   
Sbjct: 2   VETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEK-----LEFRRMFSG 56

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  +  L+I+AG+GG+EA  +   L RMY R+A    +   ++  S+ +  G K    
Sbjct: 57  EMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATV 116

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            I G   F  ++ E GVHR+ R    ++  R HTS   V V PE  +  +++I   D+RI
Sbjct: 117 HIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRI 176

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA+LY++E +
Sbjct: 177 DTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQ 236

Query: 284 RM--ANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
           +   A++   + K  IG G    +IR+Y   Q RI D R  +     + VL G +D+ + 
Sbjct: 237 KRTAASQALEDSKSDIGWG---HQIRSYVLDQSRIKDLRTGIERSDCDKVLDGDLDEYLE 293

Query: 342 PLLTA 346
             L  
Sbjct: 294 ASLKQ 298


>gi|166031017|ref|ZP_02233846.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC
           27755]
 gi|166029284|gb|EDR48041.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC
           27755]
          Length = 318

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 160/313 (51%), Gaps = 9/313 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +   +  I     +  +   L  ++ +    S ++++ +      E   +    
Sbjct: 1   MKELKDLQEHLKVIHALYSEYDDICTLIEMVDEEEDRSMVKEIEKDIAHFEEDFEK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L     D  + I+ + AGTGG+EA  +V  L+RMY R+   + + V+VL   D 
Sbjct: 57  -LRIETLLSGEYDSCNAIMTLHAGTGGTEACDWVNMLYRMYTRWFQTKGFSVQVLDYLDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV 215
           D  G K I   + G   +  +K E GVHR+ R+    ++G+  TS A+  V+P+  E   
Sbjct: 116 DITGIKNITFEVVGDNAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVVPDIEEDID 175

Query: 216 DIPLEDI-RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
              LED  +IDT RASG+GGQHVN T SA+RITH+PTGI+V   +E+SQH N+ +AM++L
Sbjct: 176 IDILEDDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQML 235

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVL 332
           +A+L  ++ +  A + S  R  ++       +IR+Y       + DHR N+    +  VL
Sbjct: 236 KAKLKLLQEQEQAEKVSDIR-GEVKDIGFGNQIRSYVMQPYTLVKDHRTNVENGNVTAVL 294

Query: 333 QGYIDDIINPLLT 345
            G +D  IN  L 
Sbjct: 295 DGDLDMFINAYLK 307


>gi|167470509|ref|ZP_02335213.1| peptide chain release factor 2 [Yersinia pestis FV-1]
          Length = 248

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 99/249 (39%), Positives = 145/249 (58%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +C L+++AG+GG+EA  +   L RMY R+A  R +K E++  SD D  G K
Sbjct: 1   MFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                I G   F  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   
Sbjct: 61  SATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AMK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 FEMQKKNADKQVLEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 KFIEASLKA 246


>gi|320106646|ref|YP_004182236.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
 gi|319925167|gb|ADV82242.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
          Length = 375

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 105/354 (29%), Positives = 181/354 (51%), Gaps = 18/354 (5%)

Query: 12  LKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           LK   A IE + S+        +   L  E   +  ++S  +  +++  +      +  +
Sbjct: 28  LKKDLARIEEQSSDPAIWADPARSQPLMRERKRLEGLLSDDADLERRSGDIDAYFELGRE 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             +        + E+      I +   ++    +  +  D  + I+ +  G GG+E+  +
Sbjct: 88  GEN-------VEPELAREIASIEQAIEKLESRTMLSEETDPLNAIVTVHPGAGGTESQDW 140

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   + +K E+    D D+ G K    TI+G   +  +  E+GVHR+ R+
Sbjct: 141 AEMLMRMYLRWGERQGFKTEINEIQDGDEAGIKSATFTITGDFAYGLLSGETGVHRLVRI 200

Query: 189 PATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ R HTS ++V V PE  +   +DI  +D+RIDT R+ G GGQHVNTTDSAVRIT
Sbjct: 201 SPFDSAKRRHTSFSSVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVNTTDSAVRIT 260

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE--RKRMANERSANRKLQIGSGDRSE 304
           H+PTGI+    +E+SQH+N+ +AMK+LR+RLY+ E  +K+  + +  + KL+I   +   
Sbjct: 261 HLPTGIVAGCQNERSQHKNKDKAMKMLRSRLYEFELDKKKAISRKLEDSKLEI---NFGS 317

Query: 305 RIRTYNFSQGRI-TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +IR+Y     R+  D R  + +  ++ VL G ++  I   L   +   I +  E
Sbjct: 318 QIRSYVLQPYRMAKDLRTRVEVGDVDRVLDGDLEPFIRGFLRMRRDGHIPAPVE 371


>gi|256846801|ref|ZP_05552256.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2]
 gi|256717767|gb|EEU31325.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2]
          Length = 331

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 116/332 (34%), Positives = 168/332 (50%), Gaps = 11/332 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E    E        K +E    ++   + +S Y++   E  D   +I    S     +  
Sbjct: 2   EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDFVESGEASFENE 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I K       E    LL     D  + I+ I +G GG+EA  +   L+RMY R+
Sbjct: 62  LQTKHKILKSD---IEEFEINLLLDREYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRW 118

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
             L+ +KV  L   + D  G K +   + G   +  +K E GVHR+ R+   +A+ + HT
Sbjct: 119 CNLKGYKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHT 178

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE  E  +V+I   DIRIDT RASG+GGQHVN TDSAVRITH P+GI+V   
Sbjct: 179 SFASVEVVPEVDENVEVEINPTDIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQ 238

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG- 314
            E+SQ  NR  AMK+L+++L ++E K+   E       +  IG G+   +IR+Y F    
Sbjct: 239 KERSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGN---QIRSYVFQPYA 295

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + DHR N  +  ++ V+ G IDD IN  L  
Sbjct: 296 LVKDHRTNTEIGNVKAVMDGSIDDFINSYLRW 327


>gi|333000723|gb|EGK20298.1| peptide chain release factor 2 [Shigella flexneri K-272]
 gi|333015221|gb|EGK34563.1| peptide chain release factor 2 [Shigella flexneri K-227]
          Length = 293

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 103/298 (34%), Positives = 163/298 (54%), Gaps = 12/298 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            Q  ++   L  +  + + +    +       A    + E   ++ +  +     D   C
Sbjct: 2   KQGLEDVSGLLELAVEADDEETFNEAV-----AELNALEEKLAQLEFRRMFSGEYDSADC 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   ISG   
Sbjct: 57  YLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASG 231
           +  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG
Sbjct: 117 YGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ 
Sbjct: 177 AGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQ 236

Query: 291 --ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 AMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|26346685|dbj|BAC36991.1| unnamed protein product [Mus musculus]
          Length = 446

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 129/360 (35%), Positives = 207/360 (57%), Gaps = 11/360 (3%)

Query: 6   HKQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +   S +      L   +A ++P+ +      + +Q  ++L +
Sbjct: 77  QKYMEDLNKEYQTLDQCLQGISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELES 136

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++L   E   I+++I  L +E+   L+PK+  D    ILE+ +G  T
Sbjct: 137 LCKSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTT 196

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + WK E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 197 GGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 256

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+R+DT RA G+GGQHV
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHV 316

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A++VLRARLY    ++   ++   RKLQ
Sbjct: 317 NTTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNARKLQ 376

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +G+  +SERIRTYNF+Q R+TD RI   +  ++  L+G   +D +I  LL +   + I  
Sbjct: 377 VGTRAQSERIRTYNFTQDRVTDPRIAYEVRDIKEFLRGEKCLDQLIERLLQSADEEAISE 436


>gi|222034586|emb|CAP77328.1| Peptide chain release factor 2 [Escherichia coli LF82]
          Length = 293

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 103/298 (34%), Positives = 163/298 (54%), Gaps = 12/298 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            Q  ++   L  +  + + +    +       A    + E   ++ +  +     D   C
Sbjct: 2   KQGLEDVSGLLELAVEADDEETFNEAV-----AELDVLEEKLAQLEFRRMFSGEYDSADC 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   ISG   
Sbjct: 57  YLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASG 231
           +  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG
Sbjct: 117 YGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ 
Sbjct: 177 AGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQ 236

Query: 291 --ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 AMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|314923649|gb|EFS87480.1| peptide chain release factor 2 [Propionibacterium acnes HL001PA1]
 gi|314967087|gb|EFT11186.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA2]
 gi|315092708|gb|EFT64684.1| peptide chain release factor 2 [Propionibacterium acnes HL060PA1]
 gi|315103819|gb|EFT75795.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA2]
 gi|327327221|gb|EGE68997.1| peptide chain release factor 2 [Propionibacterium acnes HL103PA1]
          Length = 371

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  EAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D +   LA+     ++       + +    L     D++  ++ IR+  GG +AA F 
Sbjct: 90  AADDDKESLAEATTETVKLREEI--DALEVRTLLSGQYDEREAVVTIRSEAGGVDAADFA 147

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+ 
Sbjct: 148 EMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRIS 207

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+TH
Sbjct: 208 PFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTH 267

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++R
Sbjct: 268 LPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QMR 324

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYV 331
           +Y     + + D R N  +   + V
Sbjct: 325 SYVLHPYQMVKDLRTNHEVGNTDAV 349


>gi|228472944|ref|ZP_04057701.1| peptide chain release factor 2, programmed [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275526|gb|EEK14303.1| peptide chain release factor 2, programmed [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 366

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 175/364 (48%), Gaps = 28/364 (7%)

Query: 3   FLSHKQICDLKNRFAEIELRMS----------------ESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ +L  R   +E  +                      D+  +       +    
Sbjct: 1   MVTIEQLKELSQRVENLEKYLQIDKKKIEIANEEEKTLAPDFWDSPKQAQLLVQKLQSQK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             ++ Y++  +  ++L  ++  +  ++   +  +         I  LE    +  +  D 
Sbjct: 61  KWVTDYEKSAEMVEELQIMLDFYKENAISAEEVEDFYGQTLLHIENLE----FRNMLSDE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D  S +L+I AG GG+E+  +   L RMY  +A  + + V+ L+  + D  G K +   
Sbjct: 117 GDALSAVLQITAGAGGTESCDWASMLMRMYMMWANRQGFSVKELNFQEGDVAGVKTVTLE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I+++I   DI  +
Sbjct: 177 IDGEFAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINPADISFE 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
           TMR+SG+GGQ+VN  ++AVR+ H PTGI++  S  +SQ  N+ +A+++L+++LY++E K+
Sbjct: 237 TMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKK 296

Query: 285 MANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341
              +R      K++I  G    +IR Y     + + D R       ++ V+ G +DD + 
Sbjct: 297 RQAKRDEIEANKMKIEWG---SQIRNYVMHPYKLVKDVRSGYETTNVDAVMNGELDDFLK 353

Query: 342 PLLT 345
             L 
Sbjct: 354 AYLM 357


>gi|312877708|ref|ZP_07737662.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795509|gb|EFR11884.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 316

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 112/317 (35%), Positives = 169/317 (53%), Gaps = 10/317 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              I  +  KI  + +   + +DL  +      +       ++E   ++ E +    +  
Sbjct: 1   MQKIKRLKDKIERFQKLYSQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKI--EDFK 58

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
             +L     D  + IL I AG GG+EA  +   L RMY R+A  + +KVE L     ++ 
Sbjct: 59  IEVLLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEA 118

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDI 217
           G K +   I G   +  +K E GVHR+ R+   +A+GR HTS A V VLPE   + D++I
Sbjct: 119 GIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEI 178

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             ED+ IDT RASG+GGQHVN T+SAVRI HIPTGI+V   +E+SQH+NR  A+K+L+A+
Sbjct: 179 KEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAK 238

Query: 277 LYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQ 333
           L +++ K    +    +  Q  IG G+   +IR+Y F     + DHR    +  +E V+ 
Sbjct: 239 LLELKEKERREKIQKLKGEQTEIGWGN---QIRSYVFCPYTLVKDHRTEAEVGNVEAVMD 295

Query: 334 GYIDDIINPLLTAHQAK 350
           G ID  IN  L   + +
Sbjct: 296 GEIDVFINAYLKKFRNE 312


>gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3]
 gi|123751448|sp|Q2JEW7|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3]
          Length = 366

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 98/347 (28%), Positives = 159/347 (45%), Gaps = 14/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R  ++E + ++        +       +S     I+  +  ++   D+     
Sbjct: 24  DVEGLRRRAEDLERQAADPDLWSDQDRAQAVTRRLSSTRGDIARVEGLRRRLDDIAAAAD 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D      A +  L+ +         +    L     D++  I+++ AG GG +AA 
Sbjct: 84  LGDEDLLAEAAADLPRLSSDIAG------LEVRTLLSGEYDERDAIVQLSAGAGGVDAAD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +  EV  +S+ ++ G K     +     +  ++ E GVHR+ R
Sbjct: 138 WTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKAPYAYGTLRSEHGVHRLVR 197

Query: 188 VPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V V P       VDI  +D+RID  R+SG GGQ VNTTDSAVRI
Sbjct: 198 ISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQGVNTTDSAVRI 257

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R   A E+         +  G   
Sbjct: 258 THLPTGIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRITGGPQDVSFG--- 314

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +IR Y     + + D R +        VL G +DD I+  +   ++
Sbjct: 315 SQIRNYVLHPYQMVKDLRTDTETSNTSGVLDGELDDFIDAEIRWRRS 361


>gi|90417430|ref|ZP_01225354.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2207]
 gi|90330764|gb|EAS46039.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2207]
          Length = 310

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 160/316 (50%), Gaps = 12/316 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E +A+  ++  I   D    + ++L  +  + +    + D+         +  +   
Sbjct: 1   MGRERSALEAVVKTIEDLDTGVADSRELLAMAVEEDDADTVADVETEIAALEAQLAK--- 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
             + +  +     D  +  L+I++G+GG+EA  +   L RMY R+A  + +K E++  S 
Sbjct: 58  --LEFRRMFSGEMDPNNAYLDIQSGSGGTEAQDWAEMLLRMYLRWADDKGFKAELVECSA 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            D  G K     ISG   +  ++ E GVHR+ R    ++  R HTS + V V PE  +  
Sbjct: 116 GDVAGIKGATVQISGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVYVSPEIDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQ-NRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+TH P+GI+V S  +     NR +  ++
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQSQSQRSQHQNRDKCWQM 235

Query: 273 LRARLYDVE--RKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           LRA+LY++E   ++ A + + + K  IG G    +IR+Y     RI D R  +       
Sbjct: 236 LRAKLYELEVSIRQKAAQATEDTKSDIGWG---SQIRSYVLDDARIKDLRTGVETRNTGA 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D  I   L A
Sbjct: 293 VLDGKLDQFIVASLKA 308


>gi|307111728|gb|EFN59962.1| hypothetical protein CHLNCDRAFT_133064 [Chlorella variabilis]
          Length = 426

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 91/345 (26%), Positives = 157/345 (45%), Gaps = 6/345 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL-HTVI 66
            +  LK R AE+E     S   +   + T     ++ +  +++  ++   + +DL   + 
Sbjct: 64  DLPSLKRRMAELEEAAGASDLWEQRARATAVLQQLTALREEVAALERFCGQLEDLGVAME 123

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D         E  +I   +           L     DD+  +L I+AG GG++A 
Sbjct: 124 LLEMEDEAGAQAMAAEAGSICDGLAAGLEAWELRRLLGGPYDDRGAVLTIQAGAGGTDAQ 183

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  +  +  V+     ++ G K +   + GR  +  +  E G HR+ 
Sbjct: 184 DWAEMLERMYLRWAEKQGHRTRVVDRQQGEEAGIKSVEIEVDGRYAYGYLHGEKGTHRLV 243

Query: 187 RVPATEASGRVHTSAATVAVLPEAAE--IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           R     A     TS A V V+P   E   +V++P  D+ I TMR++G+GGQ+VN  ++AV
Sbjct: 244 RQSPFNAKAARQTSFAAVEVMPMLGELVDEVELPESDLEITTMRSAGAGGQNVNKVETAV 303

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RI H+PTGI V    E+SQ QN+  A+ +L+A+L  V +++   E +  R   +   +  
Sbjct: 304 RIKHLPTGIAVKCQMERSQAQNKSIALGMLKAKLLVVAQEQQLQEVAEIRGDLVK-AEWG 362

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           ++IR Y F   + + D R       +  V+ G +   +   L   
Sbjct: 363 QQIRNYVFHPYKLVKDVRTGQETSDVAGVMDGELQPFMQAYLQHR 407


>gi|299142161|ref|ZP_07035294.1| peptide chain release factor 2, programmed [Prevotella oris C735]
 gi|298576250|gb|EFI48123.1| peptide chain release factor 2, programmed [Prevotella oris C735]
          Length = 378

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 94/376 (25%), Positives = 162/376 (43%), Gaps = 36/376 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+  R                F E +LR       D   +   +   +  I 
Sbjct: 1   MITADQLKDITERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMRKVKGIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  YD  +Q   +L      +  +    +    +     K + +LE       + +  
Sbjct: 61  KWLKGYDACRQLTDELQLAFDFYKDEMVSEEEVDADYAKAVKAVEDLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I +G GG+E+  +   L RMY+R++    + V+V    D D+ G K +  T
Sbjct: 117 EDSMDAVLKINSGAGGTESQDWAQMLMRMYQRWSESHGYTVKVTDIQDGDEAGIKSVTMT 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
           I G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 IEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM +L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR       ++ V+ 
Sbjct: 297 QLYDRALKKRQAEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTGFQTSDVDAVMD 353

Query: 334 GYIDDIINPLLTAHQA 349
           G +D  I   L    A
Sbjct: 354 GKLDGFIKAYLMEFAA 369


>gi|82545486|ref|YP_409433.1| peptide chain release factor RF-2 [Shigella boydii Sb227]
 gi|82778343|ref|YP_404692.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197]
 gi|110643039|ref|YP_670769.1| peptide chain release factor 2 [Escherichia coli 536]
 gi|117625122|ref|YP_854110.1| peptide chain release factor 2 [Escherichia coli APEC O1]
 gi|195936508|ref|ZP_03081890.1| hypothetical protein EscherichcoliO157_08602 [Escherichia coli
           O157:H7 str. EC4024]
 gi|209920345|ref|YP_002294429.1| peptide chain release factor 2 [Escherichia coli SE11]
 gi|217327359|ref|ZP_03443442.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           TW14588]
 gi|227888439|ref|ZP_04006244.1| peptide chain release factor 2 [Escherichia coli 83972]
 gi|237706466|ref|ZP_04536947.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA]
 gi|254037934|ref|ZP_04871992.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43]
 gi|256019311|ref|ZP_05433176.1| peptide chain release factor 2 [Shigella sp. D9]
 gi|256024599|ref|ZP_05438464.1| peptide chain release factor 2 [Escherichia sp. 4_1_40B]
 gi|261226204|ref|ZP_05940485.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256541|ref|ZP_05949074.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|293406389|ref|ZP_06650315.1| peptide chain release factor 2 [Escherichia coli FVEC1412]
 gi|293412249|ref|ZP_06654972.1| peptide chain release factor 2 [Escherichia coli B354]
 gi|293416144|ref|ZP_06658784.1| peptide chain release factor 2 [Escherichia coli B185]
 gi|298382125|ref|ZP_06991722.1| peptide chain release factor 2 [Escherichia coli FVEC1302]
 gi|300815658|ref|ZP_07095882.1| peptide chain release factor 2 [Escherichia coli MS 107-1]
 gi|300820694|ref|ZP_07100845.1| peptide chain release factor 2 [Escherichia coli MS 119-7]
 gi|300896214|ref|ZP_07114763.1| peptide chain release factor 2 [Escherichia coli MS 198-1]
 gi|300906560|ref|ZP_07124251.1| peptide chain release factor 2 [Escherichia coli MS 84-1]
 gi|300921222|ref|ZP_07137595.1| peptide chain release factor 2 [Escherichia coli MS 115-1]
 gi|300925129|ref|ZP_07141043.1| peptide chain release factor 2 [Escherichia coli MS 182-1]
 gi|300928174|ref|ZP_07143716.1| peptide chain release factor 2 [Escherichia coli MS 187-1]
 gi|300936044|ref|ZP_07150992.1| peptide chain release factor 2 [Escherichia coli MS 21-1]
 gi|300947611|ref|ZP_07161783.1| peptide chain release factor 2 [Escherichia coli MS 116-1]
 gi|300954270|ref|ZP_07166733.1| peptide chain release factor 2 [Escherichia coli MS 175-1]
 gi|300980316|ref|ZP_07174970.1| peptide chain release factor 2 [Escherichia coli MS 45-1]
 gi|300995678|ref|ZP_07181206.1| peptide chain release factor 2 [Escherichia coli MS 200-1]
 gi|301027417|ref|ZP_07190754.1| peptide chain release factor 2 [Escherichia coli MS 69-1]
 gi|301027812|ref|ZP_07191117.1| peptide chain release factor 2 [Escherichia coli MS 196-1]
 gi|301049326|ref|ZP_07196296.1| peptide chain release factor 2 [Escherichia coli MS 185-1]
 gi|301303048|ref|ZP_07209175.1| peptide chain release factor 2 [Escherichia coli MS 124-1]
 gi|301327291|ref|ZP_07220547.1| peptide chain release factor 2 [Escherichia coli MS 78-1]
 gi|301643760|ref|ZP_07243798.1| peptide chain release factor 2 [Escherichia coli MS 146-1]
 gi|306812207|ref|ZP_07446405.1| peptide chain release factor 2 [Escherichia coli NC101]
 gi|307139578|ref|ZP_07498934.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|307310490|ref|ZP_07590138.1| peptide chain release factor 2 [Escherichia coli W]
 gi|309785302|ref|ZP_07679933.1| peptide chain release factor 2 [Shigella dysenteriae 1617]
 gi|309793962|ref|ZP_07688387.1| peptide chain release factor 2 [Escherichia coli MS 145-7]
 gi|312964850|ref|ZP_07779090.1| peptide chain release factor 2 [Escherichia coli 2362-75]
 gi|312972868|ref|ZP_07787041.1| peptide chain release factor 2 [Escherichia coli 1827-70]
 gi|331643580|ref|ZP_08344711.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|331648636|ref|ZP_08349724.1| peptide chain release factor 2 [Escherichia coli M605]
 gi|331654388|ref|ZP_08355388.1| peptide chain release factor 2 [Escherichia coli M718]
 gi|331659020|ref|ZP_08359962.1| peptide chain release factor 2 [Escherichia coli TA206]
 gi|331664463|ref|ZP_08365369.1| peptide chain release factor 2 [Escherichia coli TA143]
 gi|331669625|ref|ZP_08370471.1| peptide chain release factor 2 [Escherichia coli TA271]
 gi|331678877|ref|ZP_08379551.1| peptide chain release factor 2 [Escherichia coli H591]
 gi|331684516|ref|ZP_08385108.1| peptide chain release factor 2 [Escherichia coli H299]
 gi|81242491|gb|ABB63201.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197]
 gi|81246897|gb|ABB67605.1| peptide chain release factor RF-2 [Shigella boydii Sb227]
 gi|110344631|gb|ABG70868.1| peptide chain release factor 2 [Escherichia coli 536]
 gi|115514246|gb|ABJ02321.1| peptide chain release factor 2 [Escherichia coli APEC O1]
 gi|209913604|dbj|BAG78678.1| peptide chain release factor 2 [Escherichia coli SE11]
 gi|217319726|gb|EEC28151.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           TW14588]
 gi|226839558|gb|EEH71579.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43]
 gi|226899506|gb|EEH85765.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA]
 gi|227834708|gb|EEJ45174.1| peptide chain release factor 2 [Escherichia coli 83972]
 gi|281179896|dbj|BAI56226.1| peptide chain release factor 2 [Escherichia coli SE15]
 gi|281602223|gb|ADA75207.1| Peptide chain release factor 2 [Shigella flexneri 2002017]
 gi|284922839|emb|CBG35928.1| peptide chain release factor 2 (RF-2) [Escherichia coli 042]
 gi|291426395|gb|EFE99427.1| peptide chain release factor 2 [Escherichia coli FVEC1412]
 gi|291432333|gb|EFF05315.1| peptide chain release factor 2 [Escherichia coli B185]
 gi|291469020|gb|EFF11511.1| peptide chain release factor 2 [Escherichia coli B354]
 gi|298277265|gb|EFI18781.1| peptide chain release factor 2 [Escherichia coli FVEC1302]
 gi|299879074|gb|EFI87285.1| peptide chain release factor 2 [Escherichia coli MS 196-1]
 gi|300298925|gb|EFJ55310.1| peptide chain release factor 2 [Escherichia coli MS 185-1]
 gi|300304786|gb|EFJ59306.1| peptide chain release factor 2 [Escherichia coli MS 200-1]
 gi|300318731|gb|EFJ68515.1| peptide chain release factor 2 [Escherichia coli MS 175-1]
 gi|300359948|gb|EFJ75818.1| peptide chain release factor 2 [Escherichia coli MS 198-1]
 gi|300394925|gb|EFJ78463.1| peptide chain release factor 2 [Escherichia coli MS 69-1]
 gi|300401599|gb|EFJ85137.1| peptide chain release factor 2 [Escherichia coli MS 84-1]
 gi|300409324|gb|EFJ92862.1| peptide chain release factor 2 [Escherichia coli MS 45-1]
 gi|300411828|gb|EFJ95138.1| peptide chain release factor 2 [Escherichia coli MS 115-1]
 gi|300418731|gb|EFK02042.1| peptide chain release factor 2 [Escherichia coli MS 182-1]
 gi|300452808|gb|EFK16428.1| peptide chain release factor 2 [Escherichia coli MS 116-1]
 gi|300458836|gb|EFK22329.1| peptide chain release factor 2 [Escherichia coli MS 21-1]
 gi|300463814|gb|EFK27307.1| peptide chain release factor 2 [Escherichia coli MS 187-1]
 gi|300526958|gb|EFK48027.1| peptide chain release factor 2 [Escherichia coli MS 119-7]
 gi|300531587|gb|EFK52649.1| peptide chain release factor 2 [Escherichia coli MS 107-1]
 gi|300841712|gb|EFK69472.1| peptide chain release factor 2 [Escherichia coli MS 124-1]
 gi|300846154|gb|EFK73914.1| peptide chain release factor 2 [Escherichia coli MS 78-1]
 gi|301077859|gb|EFK92665.1| peptide chain release factor 2 [Escherichia coli MS 146-1]
 gi|305854245|gb|EFM54683.1| peptide chain release factor 2 [Escherichia coli NC101]
 gi|306909385|gb|EFN39880.1| peptide chain release factor 2 [Escherichia coli W]
 gi|307554867|gb|ADN47642.1| peptide chain release factor RF-2 [Escherichia coli ABU 83972]
 gi|307625536|gb|ADN69840.1| peptide chain release factor 2 [Escherichia coli UM146]
 gi|308122369|gb|EFO59631.1| peptide chain release factor 2 [Escherichia coli MS 145-7]
 gi|308926422|gb|EFP71898.1| peptide chain release factor 2 [Shigella dysenteriae 1617]
 gi|310332810|gb|EFQ00024.1| peptide chain release factor 2 [Escherichia coli 1827-70]
 gi|312290406|gb|EFR18286.1| peptide chain release factor 2 [Escherichia coli 2362-75]
 gi|313647930|gb|EFS12376.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|315062195|gb|ADT76522.1| peptide chain release factor RF-2 [Escherichia coli W]
 gi|315256773|gb|EFU36741.1| peptide chain release factor 2 [Escherichia coli MS 85-1]
 gi|315289447|gb|EFU48842.1| peptide chain release factor 2 [Escherichia coli MS 110-3]
 gi|315293877|gb|EFU53229.1| peptide chain release factor 2 [Escherichia coli MS 153-1]
 gi|315295678|gb|EFU54998.1| peptide chain release factor 2 [Escherichia coli MS 16-3]
 gi|315614954|gb|EFU95592.1| peptide chain release factor 2 [Escherichia coli 3431]
 gi|320175922|gb|EFW51000.1| peptide chain release factor 2 [Shigella dysenteriae CDC 74-1112]
 gi|320182207|gb|EFW57110.1| peptide chain release factor 2 [Shigella boydii ATCC 9905]
 gi|320184566|gb|EFW59367.1| peptide chain release factor 2 [Shigella flexneri CDC 796-83]
 gi|320189234|gb|EFW63893.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195009|gb|EFW69638.1| peptide chain release factor 2 [Escherichia coli WV_060327]
 gi|320202550|gb|EFW77120.1| peptide chain release factor 2 [Escherichia coli EC4100B]
 gi|320640534|gb|EFX10073.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           G5101]
 gi|320645781|gb|EFX14766.1| peptide chain release factor 2 [Escherichia coli O157:H- str.
           493-89]
 gi|320651081|gb|EFX19521.1| peptide chain release factor 2 [Escherichia coli O157:H- str. H
           2687]
 gi|320656577|gb|EFX24473.1| peptide chain release factor 2 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662097|gb|EFX29498.1| peptide chain release factor 2 [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320667172|gb|EFX34135.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154771|gb|EFZ40969.1| peptide chain release factor 2 [Escherichia coli EPECa14]
 gi|323162519|gb|EFZ48369.1| peptide chain release factor 2 [Escherichia coli E128010]
 gi|323167904|gb|EFZ53594.1| peptide chain release factor 2 [Shigella sonnei 53G]
 gi|323173888|gb|EFZ59517.1| peptide chain release factor 2 [Escherichia coli LT-68]
 gi|323180334|gb|EFZ65886.1| peptide chain release factor 2 [Escherichia coli 1180]
 gi|323183444|gb|EFZ68841.1| peptide chain release factor 2 [Escherichia coli 1357]
 gi|323188711|gb|EFZ73996.1| peptide chain release factor 2 [Escherichia coli RN587/1]
 gi|323935878|gb|EGB32177.1| peptide chain release 2 [Escherichia coli E1520]
 gi|323941589|gb|EGB37769.1| peptide chain release [Escherichia coli E482]
 gi|323946624|gb|EGB42647.1| peptide chain release 2 [Escherichia coli H120]
 gi|323951671|gb|EGB47546.1| peptide chain release [Escherichia coli H252]
 gi|323957389|gb|EGB53111.1| peptide chain release [Escherichia coli H263]
 gi|323960813|gb|EGB56434.1| peptide chain release [Escherichia coli H489]
 gi|323966691|gb|EGB62123.1| peptide chain release [Escherichia coli M863]
 gi|323971672|gb|EGB66901.1| peptide chain release [Escherichia coli TA007]
 gi|323978818|gb|EGB73899.1| peptide chain release [Escherichia coli TW10509]
 gi|324005542|gb|EGB74761.1| peptide chain release factor 2 [Escherichia coli MS 57-2]
 gi|324011760|gb|EGB80979.1| peptide chain release factor 2 [Escherichia coli MS 60-1]
 gi|324017287|gb|EGB86506.1| peptide chain release factor 2 [Escherichia coli MS 117-3]
 gi|324115093|gb|EGC09058.1| peptide chain release [Escherichia fergusonii B253]
 gi|324119931|gb|EGC13810.1| peptide chain release [Escherichia coli E1167]
 gi|325498452|gb|EGC96311.1| peptide chain release factor 2 [Escherichia fergusonii ECD227]
 gi|326339026|gb|EGD62841.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1044]
 gi|326343092|gb|EGD66860.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1125]
 gi|327251653|gb|EGE63339.1| peptide chain release factor 2 [Escherichia coli STEC_7v]
 gi|331037051|gb|EGI09275.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|331042383|gb|EGI14525.1| peptide chain release factor 2 [Escherichia coli M605]
 gi|331047770|gb|EGI19847.1| peptide chain release factor 2 [Escherichia coli M718]
 gi|331053602|gb|EGI25631.1| peptide chain release factor 2 [Escherichia coli TA206]
 gi|331058394|gb|EGI30375.1| peptide chain release factor 2 [Escherichia coli TA143]
 gi|331063293|gb|EGI35206.1| peptide chain release factor 2 [Escherichia coli TA271]
 gi|331073707|gb|EGI45028.1| peptide chain release factor 2 [Escherichia coli H591]
 gi|331078131|gb|EGI49337.1| peptide chain release factor 2 [Escherichia coli H299]
 gi|332086815|gb|EGI91951.1| peptide chain release factor 2 [Shigella boydii 5216-82]
 gi|332087643|gb|EGI92770.1| peptide chain release factor 2 [Shigella dysenteriae 155-74]
 gi|332090885|gb|EGI95976.1| peptide chain release factor 2 [Shigella boydii 3594-74]
 gi|332344786|gb|AEE58120.1| peptide chain release factor protein PrfB [Escherichia coli UMNK88]
 gi|332752927|gb|EGJ83311.1| peptide chain release factor 2 [Shigella flexneri 4343-70]
 gi|332753726|gb|EGJ84105.1| peptide chain release factor 2 [Shigella flexneri K-671]
 gi|332754583|gb|EGJ84949.1| peptide chain release factor 2 [Shigella flexneri 2747-71]
 gi|332765821|gb|EGJ96034.1| peptide chain release factor 2 [Shigella flexneri 2930-71]
 gi|332999677|gb|EGK19262.1| peptide chain release factor 2 [Shigella flexneri VA-6]
 gi|333000272|gb|EGK19855.1| peptide chain release factor 2 [Shigella flexneri K-218]
 gi|333015042|gb|EGK34385.1| peptide chain release factor 2 [Shigella flexneri K-304]
          Length = 293

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 103/298 (34%), Positives = 163/298 (54%), Gaps = 12/298 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            Q  ++   L  +  + + +    +       A    + E   ++ +  +     D   C
Sbjct: 2   KQGLEDVSGLLELAVEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADC 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   ISG   
Sbjct: 57  YLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASG 231
           +  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG
Sbjct: 117 YGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ 
Sbjct: 177 AGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQ 236

Query: 291 --ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 AMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|149192200|ref|ZP_01870417.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii
           AK1]
 gi|148833958|gb|EDL50978.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii
           AK1]
          Length = 248

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 98/248 (39%), Positives = 146/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C +++++G+GG+EA  +   + RMY R+A  + +K EV+  S+ +  G K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTNMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  V PE  +   +DI   
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIQIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT I+V   +++SQH+N+ +AMK LRA+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 FELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|325268643|ref|ZP_08135273.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608]
 gi|324989171|gb|EGC21124.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608]
          Length = 371

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 160/373 (42%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D++ R                F E +LR       D   +  E+   +  I 
Sbjct: 1   MITADQLKDIQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKEIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  YD+ +    +       +  +    +          K I +LE       + +  
Sbjct: 61  KWIKGYDEARSLTDEAQLAFDFYKDELVTEEEVDTAYDKAFKVIEDLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+++I +G GG+E+  +   L RMY R+     +KV V    + D+ G K +   
Sbjct: 117 EDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMK 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
             G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 FEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM++L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRMEEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G ID  I   L  
Sbjct: 354 GKIDAFIKAYLME 366


>gi|326798108|ref|YP_004315927.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
 gi|326548872|gb|ADZ77257.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
          Length = 361

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 8/344 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           H  I   +    + +    +    D   +  +   +I         +D+  Q   D   +
Sbjct: 19  HLDIDAKQKEINQEQEITLKPDFWDHPKEAEKVLQSIKSKKVWTDSFDELLQAIDDASVM 78

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
              + S       A        K + ELE    +  +    +D  + IL+I AG GG+E+
Sbjct: 79  FDFYQSGDASEQEADELFQEALKRVEELE----FKNMLSAEEDQLTAILQITAGAGGTES 134

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY  +     +KV      + D  G K +     G   +  +K E+GVHR+
Sbjct: 135 CDWAAMLMRMYIMWGEKNGYKVTEQDFLEGDVAGVKSVTLQFDGNFAYGYLKGENGVHRL 194

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ + HTS A+V V P     I++++   DI  DT R+ G+GGQ+VN  ++AV
Sbjct: 195 VRISPFDSNAKRHTSFASVYVYPLVDDTIEIEVKDSDIEWDTFRSGGAGGQNVNKVETAV 254

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+ H P+GI++     +SQ QN+  AM++L+++LY++E ++     +A    +    +  
Sbjct: 255 RLHHKPSGIVIKNQESRSQLQNKDNAMRLLKSQLYEIEMRKRMETTAAIEGSK-KKIEWG 313

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +IR Y     + + D R        + VL G +D+ +   L  
Sbjct: 314 SQIRNYVLHPYKLVKDLRTGHETSNTQAVLDGELDEFLKSYLME 357


>gi|332994017|gb|AEF04072.1| protein chain release factor B, RF-2 [Alteromonas sp. SN2]
          Length = 248

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 95/248 (38%), Positives = 139/248 (56%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +    +D   C ++I++G+GG+EA  +   L RMY R+     +K E++  SD D  G K
Sbjct: 1   MFSQPNDANDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                I+G   F  ++ E+GVHR+ R    ++  R HTS ++  V PE  +         
Sbjct: 61  SATLRIAGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEVDDDIDIDIDPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQHVN TDSAVRITH PTGI+V   +++SQH+N+ +AMK L+A+LY+
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 YELQKQNAEKQAMEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGGLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|326561123|gb|EGE11488.1| peptide chain release factor 2 [Moraxella catarrhalis 7169]
          Length = 248

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 97/249 (38%), Positives = 136/249 (54%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +C L+I++G+GG+EA  +   L RMY R+     +K EVL  S+    G K
Sbjct: 1   MFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                + G   F  ++ E GVHR+ R    +++   HTS A V V PE  +         
Sbjct: 61  SATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH PTG++V   +E+SQH N+  AMK+LRA+LY+
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   ++      K  IG G    +IR+Y     RI D R  +       VL G +D
Sbjct: 181 LEMQKRMEKQQALEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVETSNTTAVLNGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 KFIEASLKA 246


>gi|281425018|ref|ZP_06255931.1| peptide chain release factor 2 [Prevotella oris F0302]
 gi|281400862|gb|EFB31693.1| peptide chain release factor 2 [Prevotella oris F0302]
          Length = 378

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 162/376 (43%), Gaps = 36/376 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+  R                F E +LR       D   +   +   +  I 
Sbjct: 1   MITADQLKDITERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMRKVKGIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  Y+  +Q   +L      +  +    +    +     K + +LE       + +  
Sbjct: 61  KWLKGYNACRQLTDELQLAFDFYKDEMVSEEEVDADYAKAVKAVEDLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I +G GG+E+  +   L RMY+R++    + V+V    D D+ G K +  T
Sbjct: 117 EDSMDAVLKINSGAGGTESQDWAQMLMRMYQRWSESHGYTVKVTDIQDGDEAGIKSVTMT 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
           I G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 IEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM +L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR       ++ V+ 
Sbjct: 297 QLYDRALKKRQAEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTGFQTSDVDAVMD 353

Query: 334 GYIDDIINPLLTAHQA 349
           G +D  I   L    A
Sbjct: 354 GKLDGFIKAYLMEFAA 369


>gi|300778963|ref|ZP_07088821.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
           35910]
 gi|300504473|gb|EFK35613.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
           35910]
          Length = 376

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 175/365 (47%), Gaps = 28/365 (7%)

Query: 4   LSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPIIS 47
           +++ QI ++++R  ++                + + +     D           +     
Sbjct: 8   INNDQIKEVQSRIEDLHRYLQIEKKKIEIANDDEKTAAPEFWDNPKTAEAFLKQLRSKKK 67

Query: 48  KISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
            +  YD+   + +DL  +      D +           + ++I +LE    +  +  +  
Sbjct: 68  WVESYDEIHTQFEDLQVLADFAKEDPDSEKELDETFPQLVEKIEDLE----FKNMLSNEG 123

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D+ S +L+I AG GG+E+  +   L RMY  +A  + +K+  L+  + D  G K +   I
Sbjct: 124 DELSAVLQITAGAGGTESCDWASMLMRMYTMWAEKQGYKIRELNFQEGDVAGVKTVTLEI 183

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDT 226
            G   F  +K E+GVHR+ R+   +++ + HTS  +V V P     I+++I   DI  +T
Sbjct: 184 EGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDTIEININPADISFET 243

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRM 285
           MRASG+GGQ+VN  ++AVR+ H PTGI++  S  +SQ QN+ +AM++LR+RLY++E +  
Sbjct: 244 MRASGAGGQNVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEER 303

Query: 286 ANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
              R+     K++I  G    +IR Y     + + D R       ++ V+ G I   +  
Sbjct: 304 MKARNEIEANKMKIEWG---SQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGNITPFLKA 360

Query: 343 LLTAH 347
            L A 
Sbjct: 361 FLMAD 365


>gi|331674375|ref|ZP_08375135.1| peptide chain release factor 2 [Escherichia coli TA280]
 gi|331068469|gb|EGI39864.1| peptide chain release factor 2 [Escherichia coli TA280]
          Length = 291

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 103/297 (34%), Positives = 163/297 (54%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 1   QGLEDVSGLLELAVEADDEETFNEAV-----AELDALEEKLAQLEFRRMFSGEYDSADCY 55

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +
Sbjct: 56  LDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAY 115

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+
Sbjct: 116 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGA 175

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+  
Sbjct: 176 GGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 235

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 236 MEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 289


>gi|282853672|ref|ZP_06263009.1| peptide chain release factor 2 [Propionibacterium acnes J139]
 gi|282583125|gb|EFB88505.1| peptide chain release factor 2 [Propionibacterium acnes J139]
 gi|314983205|gb|EFT27297.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA3]
 gi|315092426|gb|EFT64402.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA4]
          Length = 368

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 27  EAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D +   LA+     ++       + +    L     D++  ++ IR+  GG +AA F 
Sbjct: 87  AADDDKESLAEATTETVKLREEI--DALEVRTLLSGQYDEREAVVTIRSEAGGVDAADFA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+ 
Sbjct: 145 EMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRIS 204

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+TH
Sbjct: 205 PFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++R
Sbjct: 265 LPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QMR 321

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYV 331
           +Y     + + D R N  +   + V
Sbjct: 322 SYVLHPYQMVKDLRTNHEVGNTDAV 346


>gi|170718675|ref|YP_001783869.1| peptide chain release factor 2 [Haemophilus somnus 2336]
 gi|168826804|gb|ACA32175.1| peptide chain release factor 2 [Haemophilus somnus 2336]
          Length = 289

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 98/294 (33%), Positives = 155/294 (52%), Gaps = 12/294 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++   L  +  +        +    E +A  +E+ +    + +  +     D+  C +++
Sbjct: 2   EDVDGLLELSVEAED-----ETTFNEAVAEAEELEKKLATLEFRRMFSGQHDNCDCYVDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K E++  S  D  G K     I+G   F  +
Sbjct: 57  QAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELVEVSSGDVAGLKSATIRIAGEYAFGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQ 235
           + E+G+HR+ R    +++ R HTS A   V PE  +         D+RID  RASG+GGQ
Sbjct: 117 RTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIEIEINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVN T+SAVRITHIP+GI+V   + +SQHQN+ +AMK L+A+LY++E  +   ++    +
Sbjct: 177 HVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYEMEMMKKNADKQAMED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 SKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 287


>gi|27379419|ref|NP_770948.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
 gi|27352570|dbj|BAC49573.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
          Length = 322

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 166/317 (52%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   +S I   +Q+ +++  +  +      D         E  A  K +++   
Sbjct: 1   MQERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDD-----GVVAEAEAALKALKKEVA 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A    +KVE L  S+ 
Sbjct: 56  RRELEALLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEYLEESEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     +SG   +  +K E+GVHR+ R+   +++ R HTS ++V V P     I 
Sbjct: 116 EEAGIKSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVIDDSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+   + +A++  K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEMELKKREEKAAADQAAKTDIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTSG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +DD +   L   
Sbjct: 293 VLNGELDDFMAATLAQR 309


>gi|85057585|ref|YP_456501.1| peptide chain release factor 2 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789690|gb|ABC65422.1| bacterial peptide chain release factor 2 [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 370

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 101/340 (29%), Positives = 167/340 (49%), Gaps = 7/340 (2%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +        ++   M +        K        + +  K +  +  +Q   DL T    
Sbjct: 26  LKKTNQTIEKLNCAMQKEDFWQNPKKAVTISQQFNDLQDKKNTLEILEQNYLDLETFFNL 85

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           + S +E   L + E+  + K +     +    +      D  + IL    G GG+E+  +
Sbjct: 86  NESPNEASALLEEELKNLTKSV----FDFKIKIFLNQPYDINNAILLFHPGAGGTESQDW 141

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              LFRMY++YA  + +K E+L     +  G K     I G   +  +K E GVHR+ R+
Sbjct: 142 CEMLFRMYQKYAQKKNFKTEILDYQLGEGAGVKSATLLIKGTYAYGYLKAEKGVHRLVRI 201

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS     VLPE  E        ED++ID  R+SG+GGQHVNTTDSAVRIT
Sbjct: 202 SPFDSNSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQHVNTTDSAVRIT 261

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTG++V   +E+SQ +N+ +A+++L+ +L+ +  K+   + +   +          +I
Sbjct: 262 HLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKQQKEQNAKKFQSDQKENGWGSQI 321

Query: 307 RTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+Y F     + DHR N  +++LE V+ G ID+ IN  LT
Sbjct: 322 RSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYLT 361


>gi|323343897|ref|ZP_08084124.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269]
 gi|323095716|gb|EFZ38290.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269]
          Length = 373

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 99/373 (26%), Positives = 168/373 (45%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+  R                F E +LR       +   +  E+   +  I 
Sbjct: 1   MITADQLKDVLERADALHRYLDIDRKMVEFEEEQLRTQAPDFWEDPQRAQEQMKLVKGIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y + +Q   +L      ++ D    +    +     K I +LE       + +  
Sbjct: 61  KWIKGYKEVRQYADELQLAFDFYHDDMVSEEEVDADYAKAIKAIEDLEL----KNMLRQQ 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+L+I +G GG+E+  +   L RMY R+A    +KV + +  + D+ G K +   
Sbjct: 117 EDPMECVLKINSGAGGTESQDWAQMLMRMYMRWAEAHGYKVSISNLQEGDEAGIKSVTME 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRI 224
           I G    +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +    +  
Sbjct: 177 IEGGEYAYGFLKSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDSIEVFVDPARVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+ G+GGQ+VN  +S VR+ ++            ++  +  + Q +NR +AM +L++
Sbjct: 237 DTFRSGGAGGQNVNKVESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRLEEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G IDD I   L  
Sbjct: 354 GKIDDFIKAYLME 366


>gi|325105358|ref|YP_004275012.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
           saltans DSM 12145]
 gi|324974206|gb|ADY53190.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
           saltans DSM 12145]
          Length = 362

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 92/363 (25%), Positives = 164/363 (45%), Gaps = 24/363 (6%)

Query: 4   LSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPIIS 47
           ++ +Q+ DL++R   +                E    E    D   +  +    I    S
Sbjct: 1   MTKEQLQDLRDRITSLRRHLDIDAKLIELHREEAMTLEPTFWDNPKEAEKILHTIKIRKS 60

Query: 48  KISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
               Y       +DL  +   + S     D         +K + ELE    +  +    +
Sbjct: 61  WTEAYSNANAAVEDLAVMYEFYQSGDATADEVDEAYAYAQKMLEELE----FKNMLSAEE 116

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D  + +L+I AG GG+E+  +   L RMY  +      KV    S + D  G K +    
Sbjct: 117 DQLNAVLQITAGAGGTESCDWASMLMRMYIMWGEKHGCKVIEQDSQEGDVAGIKSVTLQF 176

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDT 226
            G   +  +K E+GVHR+ R+   +++ + HTS A+V V P     ID+ +   D+  +T
Sbjct: 177 EGDFAYGHLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLIDDNIDIQVNPADLEFET 236

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            R+ G+GGQ+VN  ++AVR+ H PTGI++     +SQ QN+  A+++L+++LY++E ++ 
Sbjct: 237 FRSGGAGGQNVNKVETAVRLYHKPTGIIIKNQESRSQLQNKENAIRLLKSQLYEIEMRKR 296

Query: 286 ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
             + +A         +   +IR Y     + I D+R +     ++ VL G +D+ I   L
Sbjct: 297 REKSAAIE-SDKKKIEWGSQIRNYVLHPYKLIKDNRTDYETSNVQDVLDGDLDEFIKAYL 355

Query: 345 TAH 347
             +
Sbjct: 356 MEY 358


>gi|225568858|ref|ZP_03777883.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM
           15053]
 gi|225162357|gb|EEG74976.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM
           15053]
          Length = 312

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 159/313 (50%), Gaps = 9/313 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E   +  ++  I       ++   L  +  + N  S ++++      A  +   E   
Sbjct: 1   MKELKDLQELVKTIHSLYDGYEDINLLIEMSYEENDASAVKEME-----AEIQSFEEQFE 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L     D  + I+ I AG GG+E+  + G L+RMY R+A  + + +EVL   D 
Sbjct: 56  ALRIRTLLSGEYDACNAIVTIHAGAGGTESCDWAGMLYRMYSRFAERKGYSMEVLDYLDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV 215
           D  G K +   + G   +  +K E GVHR+ R+    A+G+  TS A+  V+P+  +   
Sbjct: 116 DITGIKTVTFEVKGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEID 175

Query: 216 DIPLED-IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
               ++ ++IDT RASG+GGQHVN T SA+RITH+PTGI+V   +E+SQH N+ +AM++L
Sbjct: 176 IEIADEELKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHFNKEKAMQML 235

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVL 332
           + +L  ++ +  A + S  R  ++       +IR+Y       + DHR N     +  VL
Sbjct: 236 KVKLQLLKEQEQAEKVSDIR-GEVKEIGFGNQIRSYVMQPYTMVKDHRTNEECSNVTAVL 294

Query: 333 QGYIDDIINPLLT 345
            G ID  IN  L 
Sbjct: 295 DGGIDMFINAYLK 307


>gi|156844661|ref|XP_001645392.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116054|gb|EDO17534.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 404

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 132/360 (36%), Positives = 205/360 (56%), Gaps = 16/360 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++     +   +++  M +  + D  ++  ++YA  S I      Y  +  + + L+ +I
Sbjct: 44  QKAESYCDELDKLKKDMFDGNAFD--VEQQKKYARFSTIADAFHEYKSQLDDYKGLNEMI 101

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               SD  ++D A  E+  +   +    + +   LLP     DK CI+E+R G GG EA 
Sbjct: 102 K---SDPALKDEASQELEQLIPLLNRSSSVLLDKLLPPHEFADKPCIIELRPGVGGIEAM 158

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGVHRV 185
           +F  DL  MY  YA  +KWK E++S ++N+ G G  + + +I+  G + RM+ E GVHRV
Sbjct: 159 IFAQDLLNMYIGYATSKKWKHEIISRNENESGSGIVDAILSINEPGAYDRMRLEVGVHRV 218

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAE--------IDVDIPLEDIRIDTMRASGSGGQHV 237
           QRVPATE  GR HTS A V VLP+            +     ++IRID MRA G GGQHV
Sbjct: 219 QRVPATETKGRTHTSTAAVVVLPQLGNGSEREAEAYERTFKPDEIRIDVMRARGKGGQHV 278

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+TH P+GI+++   E+SQH+N+ +A  +L+++L ++ER     +  + RK Q
Sbjct: 279 NTTDSAVRLTHFPSGIVISMQDERSQHKNKAKAFAILKSKLAEIERLEKEEKERSARKEQ 338

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           + + DRS++IRTYN+ Q RITDHR  LTLY L  V+ G  +D++++ +      +     
Sbjct: 339 VSTTDRSDKIRTYNYPQNRITDHRCGLTLYALNEVITGERLDEVMDVVKAHDTDERSQRL 398


>gi|315657060|ref|ZP_07909945.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492452|gb|EFU82058.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 376

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 6/345 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
             L  + A++  + +     D      +   ++S   + +    + +    D+  ++   
Sbjct: 28  ELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADMQRLQKMRARIDDMEALVELG 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                E RD    +     + +++  + +    L     D++  ++ IR+G GG +AA F
Sbjct: 88  AEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAVVTIRSGAGGVDAADF 147

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RY     +  +VL +S  ++ G K +   +     +  +  E+G HR+ RV
Sbjct: 148 AQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAYGMLSVEAGTHRLARV 207

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS A V V+P       +++P  DI+ID  R+SG GGQ VNTTDSAVR+T
Sbjct: 208 SPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGPGGQSVNTTDSAVRLT 267

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+++   EKSQ QNR  AM+VL++RL  +  ++  +++         S    +++
Sbjct: 268 HLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKELAGDVKAS--WGDQM 325

Query: 307 RTY-NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R+Y  + Q  + D R        + V  G +D  I+  +   + +
Sbjct: 326 RSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRKHQ 370


>gi|161507200|ref|YP_001577154.1| peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
 gi|160348189|gb|ABX26863.1| Peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
 gi|328461868|gb|EGF34090.1| peptide chain release factor 2 [Lactobacillus helveticus MTCC 5463]
          Length = 332

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M ++   D      +  +  + +  K   + + +Q+ +D   +       +E     Q E
Sbjct: 1   MMQTGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYED--ELTALELLRAEPDADLQQE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V    K+++E  +     LL     D  + +LEI  G GG+EA  +   LFRMY+RY   
Sbjct: 59  VETDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDA 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +K E+      ++ G K +   ISG   +  +K E+GVHR+ R+   +A+ R HTS A
Sbjct: 119 AGFKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDAAKRRHTSFA 178

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
           +V V+PE  +         D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ QNR  AM  LRA+L+ +E ++   ++ A +  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWG---SQIRSYVFHPYNLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R       +  V+ G +   I   L  
Sbjct: 296 DLRTGYETADVNGVMDGKLQPFIYSYLQW 324


>gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c]
 gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c]
          Length = 367

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 14/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R A++E   S+        +       +S +   IS  +  +    ++ T   
Sbjct: 24  DVEGLRRRAADLEQEASDPDLWSDQDRAQVVTRKLSSVRGDISRVEGLRDRLDNIMTAFE 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D       Q+  LA +       + +    L     D++  I+++ AG GG +AA 
Sbjct: 84  LEDDDLISEATGQLPTLARDI------STLEVRTLLSGEYDERDAIVQLSAGAGGVDAAD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +  EV  SS+ ++ G K     +     +  ++ E GVHR+ R
Sbjct: 138 WTAMLLRMYLRWAERHGYSTEVYDSSEAEEAGLKSATFLVKAPYAYGTLRSEHGVHRLVR 197

Query: 188 VPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V + P       VDI  +D+R+D  R+SG GGQ VNTTDSAVRI
Sbjct: 198 ISPFDNQNRRQTSFAGVEITPVVELSDHVDIDDKDLRVDIFRSSGPGGQGVNTTDSAVRI 257

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R   A E+         +  G   
Sbjct: 258 THLPTGIVVTCQNERSQLQNKAAAMVVLQAKLLERRRAEEAAEKQRLTGGPQDVSFG--- 314

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +IR Y     + + D R  +       VL G IDD I+  +   ++
Sbjct: 315 SQIRNYVLHPYQMVKDLRTEVETSNTGGVLDGEIDDFIDAEVRWRRS 361


>gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1]
          Length = 368

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 150/342 (43%), Gaps = 8/342 (2%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           L+    E+  +       D      +  + ++     +   D  ++   DL  +      
Sbjct: 28  LRQEIEELSEQAGRPDLWDDVEAAQKITSRLAYAQGDLRRLDDLRRRLDDLPVLYELAED 87

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + +   +A  +              +    L     D++  ++ IR+  GG +AA F   
Sbjct: 88  EGDQAAVADADADRARLRSEI--ASLEVRTLLSGEYDEREALVTIRSEAGGIDAADFAEM 145

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A    +  +V  +S  ++ G K     +     F  +  E+G HR+ R+   
Sbjct: 146 LLRMYLRWAERHGYGTDVFETSYAEEAGIKSATFAVHAPYAFGTLSVEAGTHRLVRISPF 205

Query: 192 EASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +  GR  TS A V V     +   V+I  +D+R+D  RASG GGQ VNTTDSAVR+THIP
Sbjct: 206 DNQGRRQTSFAGVEVAPVVESSDHVEIDEKDLRVDVFRASGPGGQGVNTTDSAVRLTHIP 265

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI+V   +E+SQ QN+  AM VL+A+L D  R+       + +      G+   ++R Y
Sbjct: 266 TGIVVACQNERSQLQNKASAMVVLQAKLLDRRRQEERELMDSFKDSGSSWGN---QMRNY 322

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
                + + D R          VL G IDD I   +   + +
Sbjct: 323 VLHPYQLVKDLRTEHEEGNPSQVLDGEIDDFIEAGIRWRRQQ 364


>gi|289425462|ref|ZP_06427239.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
 gi|289154440|gb|EFD03128.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
 gi|313771879|gb|EFS37845.1| peptide chain release factor 2 [Propionibacterium acnes HL074PA1]
 gi|313807112|gb|EFS45607.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA2]
 gi|313809604|gb|EFS47340.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA1]
 gi|313813321|gb|EFS51035.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA1]
 gi|313819308|gb|EFS57022.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA2]
 gi|313819957|gb|EFS57671.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA1]
 gi|313823250|gb|EFS60964.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA2]
 gi|313824962|gb|EFS62676.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA1]
 gi|313829923|gb|EFS67637.1| peptide chain release factor 2 [Propionibacterium acnes HL007PA1]
 gi|313833072|gb|EFS70786.1| peptide chain release factor 2 [Propionibacterium acnes HL056PA1]
 gi|314924796|gb|EFS88627.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA3]
 gi|314960646|gb|EFT04748.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA2]
 gi|314972908|gb|EFT17005.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA1]
 gi|314975668|gb|EFT19763.1| peptide chain release factor 2 [Propionibacterium acnes HL045PA1]
 gi|314978052|gb|EFT22146.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA2]
 gi|314984148|gb|EFT28240.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA1]
 gi|314989571|gb|EFT33662.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA3]
 gi|315080944|gb|EFT52920.1| peptide chain release factor 2 [Propionibacterium acnes HL078PA1]
 gi|315084867|gb|EFT56843.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA2]
 gi|315086040|gb|EFT58016.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA3]
 gi|315088241|gb|EFT60217.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA1]
 gi|315095727|gb|EFT67703.1| peptide chain release factor 2 [Propionibacterium acnes HL038PA1]
 gi|315105991|gb|EFT77967.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA1]
 gi|327327935|gb|EGE69709.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA3]
 gi|327330072|gb|EGE71825.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA2]
 gi|327442693|gb|EGE89347.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA1]
 gi|327443908|gb|EGE90562.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA2]
 gi|327443976|gb|EGE90630.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA2]
 gi|328754956|gb|EGF68572.1| peptide chain release factor 2 [Propionibacterium acnes HL020PA1]
 gi|328761406|gb|EGF74932.1| peptide chain release factor 2 [Propionibacterium acnes HL099PA1]
          Length = 371

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  EAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D +   LA+     ++       + +    L     D++  ++ IR+  GG +AA F 
Sbjct: 90  AADDDKESLAEATTETVKLREEI--DALEVRTLLSGQYDEREAVVTIRSEAGGVDAADFA 147

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+ 
Sbjct: 148 EMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRIS 207

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+TH
Sbjct: 208 PFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTH 267

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++R
Sbjct: 268 LPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QMR 324

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYV 331
           +Y     + + D R N  +   + V
Sbjct: 325 SYVLHPYQMVKDLRTNHEVGNTDAV 349


>gi|314986213|gb|EFT30305.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA2]
          Length = 371

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  EAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D +   LA+     ++       + +    L     D++  ++ IR+  GG +A+ F 
Sbjct: 90  AADDDKESLAEATTETVKLREEI--DALEVRTLLSGQYDEREAVVTIRSEAGGVDASDFA 147

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+ 
Sbjct: 148 EMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRIS 207

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+TH
Sbjct: 208 PFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTH 267

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++R
Sbjct: 268 LPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QMR 324

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYV 331
           +Y     + + D R N  +   + V
Sbjct: 325 SYVLHPYQMVKDLRTNHEVGNTDAV 349


>gi|313891989|ref|ZP_07825590.1| peptide chain release factor 2 [Dialister microaerophilus UPII
           345-E]
 gi|313119632|gb|EFR42823.1| peptide chain release factor 2 [Dialister microaerophilus UPII
           345-E]
          Length = 342

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 97/337 (28%), Positives = 171/337 (50%), Gaps = 6/337 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           LK      +++MS+    D   K        +        Y +  +  + L  ++     
Sbjct: 4   LKETIRSYDIQMSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIE 63

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + +     + ++    +E+  + N+    LL  +  D  + I+   AG GG+EA  +   
Sbjct: 64  EDD--QGMEGDLKQEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEM 121

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY ++A    + +E L+    D+ G K     I G   +  +K E GVHR+ R+   
Sbjct: 122 LIRMYIKWAESEGYGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPF 181

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +A+ R HTS + V V+PE + +I+VD+ + D+R+D  RASG+GGQHVN T SAVR+TH+P
Sbjct: 182 DAAKRRHTSFSAVDVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLP 241

Query: 251 TGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI+    +E+SQ QN+ + +++LRA+L+++E K+    +   +  Q    +   +IR+Y
Sbjct: 242 TGIVAACQNERSQTQNKEQCLRILRAKLFELEMKKHEQLKKNIQGEQQA-IEWGSQIRSY 300

Query: 310 NFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            F     + D+R  +    ++ V+ G ++  I   L 
Sbjct: 301 VFQPYTLVKDNRTGVETGNVQAVMDGDLNPFIEGFLK 337


>gi|157148427|ref|YP_001455746.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895]
 gi|157085632|gb|ABV15310.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895]
          Length = 293

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 103/297 (34%), Positives = 163/297 (54%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAV-----AELDTLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+  
Sbjct: 178 GGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQA 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
 gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
          Length = 321

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 153/317 (48%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +   + +  +  +L  +  +      +R+             +    
Sbjct: 1   MRERQQLEDSINGLKRTEAQLSDNLELIEMGEEEGDSDIVREAEAALKELRADVTK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ +G GG+E+  +   L RMY R+A     KVE+L   D 
Sbjct: 57  -QQIESLLSGEADANDTYLEVHSGAGGTESQDWANMLLRMYTRWAERSGMKVELLEIHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   ++  R HTS +++   P     ID
Sbjct: 116 EEAGIKSATLLIKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSIWTYPVIDDSID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           VDI   + RIDT RASG+GGQHVNTTDSAVRITHIPTGI+V    E+SQH+NR +A  +L
Sbjct: 176 VDINESECRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDML 235

Query: 274 RARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RAR+Y+ E K+     +  A  K +IG G    +IR+Y     + + D R        + 
Sbjct: 236 RARIYEAELKKREEAANDEAASKTEIGWG---HQIRSYVLQPYQLVKDLRTGTESTSPQD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGKLDPFMEAALAQR 309


>gi|325299167|ref|YP_004259084.1| Class I peptide chain release factor [Bacteroides salanitronis DSM
           18170]
 gi|324318720|gb|ADY36611.1| Class I peptide chain release factor [Bacteroides salanitronis DSM
           18170]
          Length = 371

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEI--------------ELRM--SESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+K R   +              E ++        D   K   +   +  + 
Sbjct: 1   MITTDQLKDIKERTEALYRYLDIENKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y++ K    +L      +  +           +  +K + ELE +          
Sbjct: 61  GWIDGYNEVKTLADELELAFDFYKDELVSEAEVDEAYVQAQKAVEELELKNMLRSEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY R+A    +K+ V +  + D+ G K +   
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYMRWAESHGYKLSVANLQEGDEAGIKTVTMN 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +    +  D
Sbjct: 177 IEGAYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +N+  AM+ LR+ 
Sbjct: 237 TFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMEEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|183599838|ref|ZP_02961331.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827]
 gi|188022110|gb|EDU60150.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827]
          Length = 293

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 165/297 (55%), Gaps = 12/297 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q  ++ + L  +  +   D +  + A  E+  ++ ++ +LE    +  +     D   C 
Sbjct: 3   QGLEDVEGLLELAIEA-DDEDTFNEAGEELTQLQAKLEQLE----FRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K     + G   +
Sbjct: 58  IDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKVIGDYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             ++ ESGVHR+ R    ++ GR HTS ++  + PE   +ID++I   D+RID  RASG+
Sbjct: 118 GWLRTESGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS- 290
           GGQHVN T+SAVRITHIPT I+    +++SQH+N+ +AM+ L+A+LY++E ++   ++  
Sbjct: 178 GGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEMQKKNADKQA 237

Query: 291 -ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 238 MEENKSDIGWG---SQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|88607992|ref|YP_506484.1| peptide chain release factor 2, programmed frameshift
           [Neorickettsia sennetsu str. Miyayama]
 gi|123491729|sp|Q2GDG2|RF2_NEOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|88600161|gb|ABD45629.1| peptide chain release factor 2, programmed frameshift
           [Neorickettsia sennetsu str. Miyayama]
          Length = 365

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 7/344 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
              I    +R  EI+  +      +   +        S I + +  + +   +  DL  +
Sbjct: 22  QLDIEKKHSRLEEIQALVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKELSIQLDDLIEM 81

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I   + D E  +    ++      ++E   +     L     D   C+LEI++G GG+E+
Sbjct: 82  IELASKDHE--EETMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQSGAGGTES 139

Query: 126 ALFVGDLFRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
             +   L RMY R+A    K++V+++   + ++ G K     + G+  +   + E+GVHR
Sbjct: 140 NDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +A+ + HTS A + V P    EI++ I  +D++IDT RASG+GGQHVN T+SA
Sbjct: 200 LVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGGQHVNKTESA 259

Query: 244 VRITHIPTGIMVTSSEKSQHQ-NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           +RITH+P+ I+V S        N+  AM++L++RLY++E ++   + +A R ++   G  
Sbjct: 260 IRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAARNVEDSIG-W 318

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     + I D R    +  +  VL G +D  I   ++
Sbjct: 319 GYQIRSYVLHPYQMIKDLRTGHEVGNITSVLDGDLDSFIIATIS 362


>gi|255994191|ref|ZP_05427326.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
 gi|255993859|gb|EEU03948.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
          Length = 320

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 12/312 (3%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           L +E   +  ++S+         + + L  ++ +   + ++  LA      +E    +L 
Sbjct: 6   LLKEKQEVEVVVSQYDELLLLIDDAKTLQAMVSEGLVEEDMEMLATDIFKKLEAGYHKL- 64

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                  L     D  +  + I +G+GGS+A  +   L RMY R+A  + ++++V+  + 
Sbjct: 65  ---KVTTLLAGKHDKANAYISIHSGSGGSDAQDWGKMLLRMYTRWAENKGFQIDVIDLNQ 121

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID 214
           N   G+K     I G   +  +K E GVHR+ R+   ++S R HTS A+V V+PE     
Sbjct: 122 NGVAGFKSATLLIKGLNAYGYLKKERGVHRLVRISPFDSSSRRHTSFASVDVIPEIKTDK 181

Query: 215 VD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           V  I  +D+RID  RASG+GGQHVN TDSAVRI H+PT I+V   +E+SQH N+  AM +
Sbjct: 182 VIKIDDKDLRIDKFRASGAGGQHVNKTDSAVRIIHLPTKIVVTCQNERSQHMNKEAAMHM 241

Query: 273 LRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           L ++L +++ K      +       QI  G    +IR+Y F   R + DHR    +  ++
Sbjct: 242 LISKLMELKEKEHKESINDLTGDYNQITWG---SQIRSYVFHPYRMVKDHRTGAEMGNVD 298

Query: 330 YVLQGYIDDIIN 341
            V+ G +D  I 
Sbjct: 299 AVMDGDLDYFIQ 310


>gi|255535765|ref|YP_003096136.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341961|gb|ACU08074.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
           3519-10]
          Length = 370

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           QI   K   +  E +       D           +      ++ Y++     +D+  ++ 
Sbjct: 22  QIEKKKIEISNDEEKTLSPEFWDKPKDAEIFMKQLRSKKKWVTDYEEIFSRLEDIQVLME 81

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D +           + ++I +LE    +  +  +  D+ S +L+I AG GG+E+  
Sbjct: 82  FAKEDPDSEKELDEAFPVLLEKIEDLE----FKNMLSNEGDELSAVLQITAGAGGTESCD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY  +A  + +K+  L+  + D  G K +   I G   F  ++ E+GVHR+ R
Sbjct: 138 WASMLMRMYTMWAEKQGYKLRELNYQEGDVAGIKTVTLEIDGEFAFGYLRGENGVHRLVR 197

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +++ + HTS  +V V P     I+++I   DI  +TMR+SG+GGQ+VN  ++AVR+
Sbjct: 198 ISPFDSNAKRHTSFVSVYVYPLVDDTIEININPADISFETMRSSGAGGQNVNKVETAVRL 257

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRS 303
            H PTGI++  S  +SQ QN+ +AM++LR+RLY++E +     R+     K++I  G   
Sbjct: 258 RHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEAGKMKIEWG--- 314

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +IR Y     + + D R       ++ V+ G +   +   L + 
Sbjct: 315 SQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGELTPFLKAFLMSD 359


>gi|50842838|ref|YP_056065.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
 gi|289426937|ref|ZP_06428661.1| peptide chain release factor 2 [Propionibacterium acnes J165]
 gi|295130890|ref|YP_003581553.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
 gi|81611548|sp|Q6A808|RF2_PROAC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|50840440|gb|AAT83107.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
 gi|289159877|gb|EFD08057.1| peptide chain release factor 2 [Propionibacterium acnes J165]
 gi|291375816|gb|ADD99670.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
 gi|332675771|gb|AEE72587.1| peptide chain release factor 2 [Propionibacterium acnes 266]
          Length = 368

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 27  EAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 86

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D +   LA+     ++       + +    L     D++  ++ IR+  GG +AA F 
Sbjct: 87  AADDDKESLAEATTETVKLREEI--DALEVRTLLSGQYDEREAVVTIRSEAGGVDAADFA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+ 
Sbjct: 145 EMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRIS 204

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+TH
Sbjct: 205 PFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++R
Sbjct: 265 LPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QMR 321

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYV 331
           +Y     + + D R N  +   + V
Sbjct: 322 SYVLHPYQMVKDLRTNHEVGNTDAV 346


>gi|73946154|ref|XP_541157.2| PREDICTED: similar to mitochondrial translational release factor
           1-like [Canis familiaris]
          Length = 280

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 127/266 (47%), Positives = 175/266 (65%), Gaps = 3/266 (1%)

Query: 92  ELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS 151
            L  +I  LL+P +  D    ILE+ AG GG EA LF  ++F MY++YAA ++W  E L 
Sbjct: 9   FLYLQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLE 68

Query: 152 SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA 211
              ++ GG +   A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  
Sbjct: 69  YFPSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPT 128

Query: 212 EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAM 270
           EI++ I  +D+RI T RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +NR  AM
Sbjct: 129 EINLVINPKDLRIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAM 188

Query: 271 KVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           K LRA+LY +  +   ++R + RK+Q+G+  RSE+IRTYNF Q R+TDHRIN +L+ LE 
Sbjct: 189 KKLRAKLYSMYLEEETSKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLET 248

Query: 331 VLQGY--IDDIINPLLTAHQAKMIGS 354
            +QG   +D+++  L      + +  
Sbjct: 249 FMQGEYLLDELVQSLKDYADYESLVE 274


>gi|197335699|ref|YP_002155207.1| peptide chain release factor 2 [Vibrio fischeri MJ11]
 gi|197317189|gb|ACH66636.1| peptide chain release factor 2 [Vibrio fischeri MJ11]
          Length = 248

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 97/248 (39%), Positives = 147/248 (59%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C +++++G+GG+EA  +   + RMY R+A  + +KVEV+  S+ +  G K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I+G   +  ++ E+GVHR+ R    ++SGR HTS A+  + PE  +   +DI   
Sbjct: 61  GATVRIAGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT I+V   +++SQH+N+ +AMK LRA+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 YELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|291515566|emb|CBK64776.1| bacterial peptide chain release factor 2 (bRF-2) [Alistipes shahii
           WAL 8301]
          Length = 370

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 98/376 (26%), Positives = 165/376 (43%), Gaps = 35/376 (9%)

Query: 3   FLSHKQICDLKNRFAEIE----------------LRMSESPSVDAYIKLTEEYAAISPII 46
            +  +QI +++ R   +E                 +  E    D   K  E+   ++ I 
Sbjct: 1   MVLAEQIKEIEQRREALERCLDIDQKRIDLRNEEEKTQEPNFWDNPDKAREQLRKVAGIK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           + +  YD  +++ +DL  +           +       A  ++I +LE       + +  
Sbjct: 61  AWVEDYDAIRKDAEDLQLMPDFVKEGVVSEEEMDAHYAATLEKIEKLE----MRNMLRRD 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    IL+I AG GG+EA  +   L RMY R+     +KV+VL     D+ G K     
Sbjct: 117 EDKLGAILDINAGAGGTEALDWASMLMRMYTRWGEAHGYKVKVLDFQAGDEVGVKSCTLE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRID 225
             G   +  +K E+GVHR+ R+    A+ +  T+ A+V V P   +         DI  D
Sbjct: 177 FEGEYAYGYLKSENGVHRMVRLSPFNANNKRQTTFASVFVSPAVDDTIEITVNAADIEWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  ++AVR+ +             ++     +SQ  NR  AM++LR++
Sbjct: 237 TFRSSGAGGQNVNKVETAVRLRYHAKDPDTGEAIEYLIENMETRSQLMNRENAMRILRSK 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LY  E  +    + A    K +I  G    +IR+Y F   R+ DHR  +    +E V+ G
Sbjct: 297 LYQRELDKRMATQQALEASKKKIEWG---SQIRSYVFDDRRVKDHRTGVQTSAVESVMDG 353

Query: 335 YIDDIINPLLTAHQAK 350
            +D  I   L  + A+
Sbjct: 354 DLDAFIKAYLMEYGAQ 369


>gi|330997843|ref|ZP_08321678.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329569731|gb|EGG51496.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 370

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 85/372 (22%), Positives = 154/372 (41%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEI--------------ELRM--SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +              E ++        D      E+   +  + 
Sbjct: 1   MITIEQLKDIKTRTEALYRYLDIENKKIQVEEEQLRTQAPGFWDDAKAAEEQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y + K    +L      +  +    +            + +LE         +  
Sbjct: 61  KWIDGYKEVKTLCDELELAFDFYKEEMVTEEEVDGLYSRTVDALEDLELRNM----LRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I +G GG+E+  +   L RMY R+A    +K  + +  D D+ G K +   
Sbjct: 117 EDPMDAVLKINSGAGGTESQDWASMLMRMYMRWAESHGYKCTISNYQDGDEAGIKTVTMQ 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  D
Sbjct: 177 IEGEFAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVYVDPSRVSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
             R+ G+GGQ+VN  ++ VR+ +             ++  +  + Q +NR  AM++L+++
Sbjct: 237 LFRSGGAGGQNVNKVETGVRLRYQYKDPDTGEEEEILIENTESRKQLENRENAMRLLKSQ 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD   ++   +++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDRALQKRKAKQAEIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            +D  I   L  
Sbjct: 354 KLDGFIKSYLME 365


>gi|89897615|ref|YP_521102.1| hypothetical protein DSY4869 [Desulfitobacterium hafniense Y51]
 gi|89337063|dbj|BAE86658.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 315

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 118/319 (36%), Positives = 173/319 (54%), Gaps = 15/319 (4%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGD--HNSDSEIRDLAQIEVLAIEKEIRELENE 96
              +S    K+  Y   +Q+  DL T+        D  +    +  +LA+++ +  LE  
Sbjct: 2   MQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEGILALQQRLDGLEL- 60

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
               +L     D  + I+ + AG GG+EA  +V  L+RMY RY     +KVE +     D
Sbjct: 61  ---EILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGD 117

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD 216
           + G K    + +G   F  +K E GVHR+ R+   +ASGR HTS A+V V+PE  E + +
Sbjct: 118 EAGIKSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAE 177

Query: 217 --IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
             IP ED+++DT RASG+GGQHVN T SAVRITH+PTGI+V + SE+SQ QNR   +++L
Sbjct: 178 IQIPPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRIL 237

Query: 274 RARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEY 330
           +A+L +++RK+  +E S  R  Q  I  G    +IR+Y F     + DHR N        
Sbjct: 238 QAKLLELKRKQQEDEISEIRGEQQEIAWG---SQIRSYVFHPYNMVKDHRTNEETANTGA 294

Query: 331 VLQGYIDDIINPLLTAHQA 349
           V+ G ID  I   L   +A
Sbjct: 295 VMDGEIDQFIAAYLQKTKA 313


>gi|258648792|ref|ZP_05736261.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259]
 gi|260851127|gb|EEX70996.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259]
          Length = 371

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 90/373 (24%), Positives = 156/373 (41%), Gaps = 35/373 (9%)

Query: 3   FLSHKQICDLKNRFA-------------EIELR---MSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D++ R               E+E            D   +  E+   +  I 
Sbjct: 1   MITADQLKDVQTRAEALHKYLDIDAKRVELEEEQLRTQAPDFWDDPKRAEEQMKKVKGIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  Y+       +L T    +  +    +    +       I  LE       + +  
Sbjct: 61  KWVIDYNDVCLLVGELETAFEFYKDELVTEEEVDADYQKAIDAIEALEL----RNMLRGE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I +G GG+E+  +   L RMY RYA  + +K  + +  D D+ G K +   
Sbjct: 117 EDSMDAVLKINSGAGGTESQDWASMLMRMYLRYAEAQGYKTRISNLQDGDEAGIKTVTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P   +          I  D
Sbjct: 177 IEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDNIEVYVDPSKISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
             R+ G+GGQ+VN  ++ VR+ +  T          ++  +  + Q +NR  AM++LR++
Sbjct: 237 LFRSGGAGGQNVNKVETGVRLRYQYTDPDTGETEEILIENTESRKQLENRENAMRLLRSQ 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD   ++    ++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDRALQKRRAAQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTAH 347
            +D  I   L  +
Sbjct: 354 KLDGFIKAYLMEN 366


>gi|224025165|ref|ZP_03643531.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM
           18228]
 gi|224018401|gb|EEF76399.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM
           18228]
          Length = 371

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEI--------------ELRM--SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +              E ++        D   K   +   +  + 
Sbjct: 1   MITIEQLKDVKERTEALHRYLDIDNKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           + I  Y++ K    +L      +  +               + I ELE +          
Sbjct: 61  NWIEGYNEVKTLADELELSFDFYKDELVTEAEVDDAYNKAMQAIEELELKNMLRSEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY R+A    +K+ V +  + D+ G K +   
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMN 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +    +  D
Sbjct: 177 IEGSYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +N+  AM+ LR+ 
Sbjct: 237 TFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMEEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040430|gb|ACT57226.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 355

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 167/344 (48%), Gaps = 16/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +   R + +  +  +       I+   L  E   +   IS I     +  +   +   +
Sbjct: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-NLILLEL 75

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D  I       +  I+ E+        +  L     D     LE+ AG GG+E+ 
Sbjct: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  RK+K E L   D ++ G K     I G   +  +K E GVHR+ 
Sbjct: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+   +++ R HTS +++ V P     I+++I   D RIDT RASG+GGQHVNTTDSAVR
Sbjct: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDR 302
           ITHIPTG++V    E+SQH+N+ +A  +LRA+LY++E ++         + K +IG G  
Sbjct: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     + + D R N+       VL G +DD +   L 
Sbjct: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352


>gi|189485333|ref|YP_001956274.1| peptide chain release factor 2 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287292|dbj|BAG13813.1| peptide chain release factor 2 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 329

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 110/332 (33%), Positives = 179/332 (53%), Gaps = 10/332 (3%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84
           E    +   K  +  A +  + +   ++    +E +DL  +      +++  +    +V 
Sbjct: 2   EPDFWNDQNKAKKTMAELDDLKNVCRLWYDMSREVKDLIDLSMLATDEND--EKLLKDVE 59

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRK 144
              K++ +  +            D  + I+ I AG GG+E+  +   L RMY R+A  + 
Sbjct: 60  DGSKKLEKELSVFEVRTKLGGEHDKNNAIISIHAGAGGTESCDWAQILLRMYSRWAEDKG 119

Query: 145 WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATV 204
           +K EV+ S D D+ G K I   I G   +  ++ E GVHR+ R+   +++ R HTS ++V
Sbjct: 120 FKTEVVDSLDGDEAGIKNITMIIRGEYAYGFLQSEIGVHRLVRISPFDSNKRRHTSFSSV 179

Query: 205 AVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
            V+PE    ID+ I  +DIRIDT RASG+GGQH+N TDSAVRITH+ T I V + +++SQ
Sbjct: 180 DVIPEVEDSIDIIIEDKDIRIDTYRASGAGGQHINKTDSAVRITHLATEITVQSQNDRSQ 239

Query: 263 HQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGR-ITDH 319
            +NR  AMK+L+ARLY++E+++     E+  N K  I   + S +IR+Y F   + + DH
Sbjct: 240 IKNRTTAMKLLKARLYELEQEKQRASYEKHYNEKGAI---EWSSQIRSYVFMPYQLVKDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           R      +++ V+ G IDD I+  L+    K 
Sbjct: 297 RTGYKTLRMDLVMDGDIDDFISAYLSWKLEKK 328


>gi|323497777|ref|ZP_08102791.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326]
 gi|323317124|gb|EGA70121.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326]
          Length = 248

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 96/248 (38%), Positives = 146/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C +++++G+GG+EA  +   + RMY R+A  + +K EV+  S+ +  G K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  + PE  +   +DI   
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|257125766|ref|YP_003163880.1| peptide chain release factor 2 [Leptotrichia buccalis C-1013-b]
 gi|257049705|gb|ACV38889.1| bacterial peptide chain release factor 2 (bRF- 2) [Leptotrichia
           buccalis C-1013-b]
          Length = 364

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 176/343 (51%), Gaps = 8/343 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           H  + +LK     +E +  E    +      E    IS     +  YD      +D+ T+
Sbjct: 23  HLDLENLKIEIENLEKQTFEPDFWN-AENSQEILKNISAKKKMLEEYDNLNGLFEDVSTI 81

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I          +    +     K++    +     LL  +  D  + IL I +G GG+EA
Sbjct: 82  IEFIEMGDNSFENELEQK---AKKLENEIDNFKTKLLLDEEYDTNNAILTINSGAGGTEA 138

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L+RMY+R+A    +KVEVL S   ++ G K I   I G   +  +K E GVHR+
Sbjct: 139 CDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKGSYAYGYLKGEKGVHRL 198

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ R HTS A V V PE  +  +++I  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 199 VRISPFDSNARRHTSFAAVNVTPEIEDDVEINIRTEDLKIDTYRASGAGGQHVNTTDSAV 258

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPT  +V   +E+SQ +NR  AMK+L+++L+++E ++   E +  +  +    +  
Sbjct: 259 RITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGTE-SKIEWG 317

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y F     + DHR       +E V+ G ID  IN  L 
Sbjct: 318 SQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLK 360


>gi|323491501|ref|ZP_08096683.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546]
 gi|323314255|gb|EGA67337.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546]
          Length = 248

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 96/248 (38%), Positives = 146/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C +++++G+GG+EA  +   + RMY R+A  + +K EV+  S+ +  G K
Sbjct: 1   MFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  + PE  +   +DI   
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|325860237|ref|ZP_08173362.1| putative peptide chain release factor 2 [Prevotella denticola CRIS
           18C-A]
 gi|325482324|gb|EGC85332.1| putative peptide chain release factor 2 [Prevotella denticola CRIS
           18C-A]
          Length = 371

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D++ R                F E +LR       D   +  E+   +  I 
Sbjct: 1   MITADQLKDIQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  YD+ +   ++       +  +    +          K I +LE       + +  
Sbjct: 61  KWIKGYDEARSLTEETQLAFDFYKDELVTEEEVDAAYAKALKVIEDLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+++I +G GG+E+  +   L RMY R+     +KV V    + D+ G K +   
Sbjct: 117 EDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMK 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
             G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 FEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM++L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRIEEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G ID  I   L  
Sbjct: 354 GKIDAFIKAYLME 366


>gi|327312646|ref|YP_004328083.1| putative peptide chain release factor 2 [Prevotella denticola
           F0289]
 gi|326945641|gb|AEA21526.1| putative peptide chain release factor 2 [Prevotella denticola
           F0289]
          Length = 371

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D++ R                F E +LR       D   +  E+   +  I 
Sbjct: 1   MITADQLKDIQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  YD+ +   ++       +  +    +          K I +LE       + +  
Sbjct: 61  KWIKGYDEARSLTEETQLAFDFYKDELVTEEEVDAAYAKALKVIEDLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+++I +G GG+E+  +   L RMY R+     +KV V    + D+ G K +   
Sbjct: 117 EDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMK 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
             G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 FEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM++L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+   E++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRMEEQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G ID  I   L  
Sbjct: 354 GKIDAFIKAYLME 366


>gi|254284237|ref|ZP_04959205.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B]
 gi|219680440|gb|EED36789.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B]
          Length = 280

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 105/285 (36%), Positives = 153/285 (53%), Gaps = 11/285 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D E       ++  + + +  LE    +  +     DD +  L+I+AG+GG+EA
Sbjct: 1   MAASEDDEETVQAVTDDMANLMQALEALE----FRRMFSGEMDDANAFLDIQAGSGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+   R +K  ++  S  D  G K       G   F  ++ E+GVHR+
Sbjct: 57  QDWAEMLLRMYLRWGESRGFKTTLVEVSAGDVAGIKSATIQFEGEYPFGWIRTETGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    ++  R HTS A+V V PE    ID++I   D+R+DT R+SG+GGQHVNTTDSAV
Sbjct: 117 VRKSPFDSGNRRHTSFASVFVSPEVDDNIDIEINPADLRVDTYRSSGAGGQHVNTTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           RITH+PT ++    +E+SQHQNR RAMK LRA+LY++E ++   E     + K  IG G 
Sbjct: 177 RITHVPTNVVASCQTERSQHQNRDRAMKQLRAKLYELEIQKRNAEAQAMEDSKADIGWG- 235

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y     RI D R  +  +  + VL G +D  I   L  
Sbjct: 236 --SQIRSYVLDDSRIKDLRTGVETHNTQAVLDGDLDQFIEASLKQ 278


>gi|329964588|ref|ZP_08301642.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT
           12057]
 gi|328524988|gb|EGF52040.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT
           12057]
          Length = 371

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 97/372 (26%), Positives = 160/372 (43%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +   +                      D       +   +  + 
Sbjct: 1   MITAEQLKDIKERAEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             IS Y++ K   ++L      +  +    +      +     +  LE +          
Sbjct: 61  QWISGYNEVKTLAEELQLSFDFYKDELVTEEEVDEAYVKASAAVEALELKNMLREEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ G K     
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYLRYAETYGYKAVISNLQEGDEAGIKTCTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           ISG   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I + +I  D
Sbjct: 177 ISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR  AM+ LR+ 
Sbjct: 237 TFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|323466941|gb|ADX70628.1| Peptide chain release factor 2 [Lactobacillus helveticus H10]
          Length = 332

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 104/329 (31%), Positives = 164/329 (49%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M +    D      +  +  + +  K   + + +Q+ +D   +       +E     Q E
Sbjct: 1   MMQPGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYED--ELTALELLRAEPDADLQQE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V    K+++E  +     LL     D  + +LEI  G GG+EA  +   LFRMY+RY   
Sbjct: 59  VETDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDA 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +K E+      ++ G K +   ISG   +  +K E+GVHR+ R+   +A+ R HTS A
Sbjct: 119 AGFKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDATKRRHTSFA 178

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
           +V V+PE  +         D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ QNR  AM  LRA+L+ +E ++   ++ A +  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLQNRETAMNELRAKLFHLEEEKKQKQKQALKGDQKEIGWG---SQIRSYVFHPYNLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R       +  V+ G +   I   L  
Sbjct: 296 DLRTGYETADVNGVMDGKLQPFIYSYLQW 324


>gi|251792904|ref|YP_003007630.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534297|gb|ACS97543.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus
           NJ8700]
          Length = 289

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 95/294 (32%), Positives = 157/294 (53%), Gaps = 12/294 (4%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++   L  +  +   ++   +       A   E+ +   ++ +  +     D   C +++
Sbjct: 2   EDVDGLLELAVEAEDEATFNEAV-----AELDELEQQLAKLEFRRMFSGEHDACDCYVDL 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           +AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K     +SG   F  +
Sbjct: 57  QAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGVKSATIRVSGEYAFGWL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQ 235
           + E+G+HR+ R    +++ R HTS +   V PE  +         D+RID  RASG+GGQ
Sbjct: 117 RTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           HVN T+SAVRITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    +
Sbjct: 177 HVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMED 236

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            K  IG G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 237 NKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 287


>gi|313792395|gb|EFS40490.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA1]
 gi|313801469|gb|EFS42718.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA2]
 gi|313838232|gb|EFS75946.1| peptide chain release factor 2 [Propionibacterium acnes HL086PA1]
 gi|314963179|gb|EFT07279.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA1]
 gi|315078242|gb|EFT50285.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA2]
 gi|327453496|gb|EGF00151.1| peptide chain release factor 2 [Propionibacterium acnes HL092PA1]
          Length = 371

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  AAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D +   LA+     ++       + +    L     D++  ++ IR+  GG +AA F 
Sbjct: 90  AADDDKESLAEATTETVKLREEI--DALEVRTLLSGQYDEREAVVTIRSEAGGVDAADFA 147

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+ 
Sbjct: 148 EMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRIS 207

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+TH
Sbjct: 208 PFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTH 267

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++R
Sbjct: 268 LPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QMR 324

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYV 331
           +Y     + + D R N  +   + V
Sbjct: 325 SYVLHPYQMVKDLRTNHEVGNTDAV 349


>gi|328472050|gb|EGF42927.1| peptide chain release factor 2 [Vibrio parahaemolyticus 10329]
          Length = 248

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 97/248 (39%), Positives = 145/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C ++++AG+GG+EA  +   + RMY R+A  + +K EV+  S+ +  G K
Sbjct: 1   MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ISG   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE  E   +DI   
Sbjct: 61  SATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAIDINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|148981822|ref|ZP_01816539.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales
           bacterium SWAT-3]
 gi|145960730|gb|EDK26070.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales
           bacterium SWAT-3]
          Length = 248

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 96/248 (38%), Positives = 146/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C +++++G+GG+EA  +   + RMY R+A  + +K EV+  S+ +  G K
Sbjct: 1   MFSGEHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  + PE  +   +DI   
Sbjct: 61  GATVRISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LEIQKQNAEKQANEDTKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|315655086|ref|ZP_07907988.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
 gi|315490567|gb|EFU80190.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
          Length = 376

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 164/345 (47%), Gaps = 6/345 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
             L  + A++  + +     D      +   ++S     +    + +    D+  ++   
Sbjct: 28  ELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQVDMQRLQKMRARIDDMEALVELG 87

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                E RD    +     + +++  + +    L     D++  ++ IR+G GG +AA F
Sbjct: 88  AEEAGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAVVTIRSGAGGVDAADF 147

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY RY     +  +VL +S  ++ G K +   +     +  +  E+G HR+ RV
Sbjct: 148 AQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAYGMLSVEAGTHRLARV 207

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
               A+G+  TS A V V+P       +++P  DI+ID  R+SG GGQ VNTTDSAVR+T
Sbjct: 208 SPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGPGGQSVNTTDSAVRLT 267

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+++   EKSQ QNR  AM+VL++RL  +  ++  +++         S    +++
Sbjct: 268 HLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKELAGDVKAS--WGDQM 325

Query: 307 RTY-NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R+Y  + Q  + D R        + V  G +D  I+  +   + +
Sbjct: 326 RSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRKHQ 370


>gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 316

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 104/301 (34%), Positives = 158/301 (52%), Gaps = 12/301 (3%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           I  Y+  K + +D+  +    + DS   +    E   +EK    L   I          D
Sbjct: 18  IEEYEMVKNKFEDILVLFDFASQDSSFEEELSKETDNLEKITDSLSISIM----LNGQYD 73

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
             + IL + +GTGG +A  +   L RMY R+A+   +K+  +    +D  G K     I 
Sbjct: 74  ANNAILSVHSGTGGLDAQDWTQMLLRMYTRFASNMGFKISYIDLQQDDQSGVKSATLKID 133

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTM 227
           G   +  +K E GVHR+ R+   ++SG+ HTS A+V VLPE    I V+I  +D+++DT 
Sbjct: 134 GENAYGYLKCEKGVHRLVRISPFDSSGKRHTSFASVDVLPELDDSIKVEINPKDLKVDTY 193

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+SG+GGQHVN T+SA+RITHIPTG++V   +E+SQ  NR  AMK+L A+L +++     
Sbjct: 194 RSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQISNRETAMKMLTAKLIELKELEHK 253

Query: 287 NERSANRK--LQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPL 343
           ++    +    QI  G    +IR+Y F     + DHR N  +  +  V+ G I   IN  
Sbjct: 254 DKIEDIQGKYSQIAWG---SQIRSYVFQPYTMVKDHRTNYEVGNIGSVMDGDIMPFINAY 310

Query: 344 L 344
           L
Sbjct: 311 L 311


>gi|332881782|ref|ZP_08449430.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680421|gb|EGJ53370.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 370

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 86/372 (23%), Positives = 155/372 (41%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEI--------------ELRM--SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +              E ++        D      E+   +  + 
Sbjct: 1   MITIEQLKDVKTRTEALYRYLDIENKKIQVEEEQLRTQAPGFWDDAKAAEEQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y + K    +L      +  +    +            + +LE       + +  
Sbjct: 61  KWIDGYKEVKTLCDELELAFDFYKEEMVTEEEVDGLYGRTVDALEDLEL----RNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I +G GG+E+  +   L RMY R+A    +K  V +  D D+ G K +   
Sbjct: 117 EDPMDAVLKINSGAGGTESQDWASMLMRMYMRWAESHGYKCTVSNYQDGDEAGIKTVTMQ 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  D
Sbjct: 177 IEGEFAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVYVDPSRVSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
             R+ G+GGQ+VN  ++ VR+ +             ++  +  + Q +NR  AM++L+++
Sbjct: 237 LFRSGGAGGQNVNKVETGVRLRYQYKDPDTGEEEEILIENTESRKQLENRENAMRLLKSQ 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD   ++   +++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDRALQKRKAKQAEIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            +D  I   L  
Sbjct: 354 KLDGFIKSYLME 365


>gi|260911088|ref|ZP_05917720.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634786|gb|EEX52844.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 394

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 89/374 (23%), Positives = 158/374 (42%), Gaps = 36/374 (9%)

Query: 2   VFLSHKQICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPI 45
           + ++  Q+ D++ R   +   +                      D   +  E+   +  I
Sbjct: 22  IMITADQLKDIQERAEALHRYLDIDRKRVELEEEELRTQAPDFWDDPARAQEQMKKVKGI 81

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
              I  Y + +Q   +L      ++ +    +    +       I  LE         + 
Sbjct: 82  EKWIVGYKEVRQATDELQLAFDFYHDEMVTEEEVDEDYRKAITAIENLELMNM----LRQ 137

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
            +D   C+L+I +G GG+E+  +   L RMY R+A     +V + +  + D+ G K +  
Sbjct: 138 KEDPMDCVLKINSGAGGTESQDWAQMLMRMYMRWAEAHGHRVTISNLQEGDEAGIKSVTM 197

Query: 166 TISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIR 223
            I G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          + 
Sbjct: 198 EIEGGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVS 257

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLR 274
            D  R+ G+GGQ+VN  ++ VR+ +  T          ++  +  + Q +NR  AM++L+
Sbjct: 258 WDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLK 317

Query: 275 ARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           ++LYD   K+    ++     K +I  G    +IR+Y F   R+ DHR N     ++ V+
Sbjct: 318 SQLYDRAMKKRLEAQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTADVDGVM 374

Query: 333 QGYIDDIINPLLTA 346
            G IDD I   L  
Sbjct: 375 DGKIDDFIKAYLME 388


>gi|260495130|ref|ZP_05815258.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33]
 gi|260197187|gb|EEW94706.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33]
          Length = 331

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 118/332 (35%), Positives = 170/332 (51%), Gaps = 11/332 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E    E        K +E    ++   + +S Y++   E +D   +I    S     +  
Sbjct: 2   EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIEDEEVLIDFVESGETSFESE 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             E   I K       E    LL     D  + I+ I +G GG+EA  +   L+RMY R+
Sbjct: 62  LSEKHKILKNDV---EEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRW 118

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
             LR +KV  L   + D  G K +   + G   +  +K E GVHR+ R+   +A+ + HT
Sbjct: 119 CNLRNYKVTELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHT 178

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE  E  +V+I   DIRIDT RASG+GGQHVN TDSAVRITH P+GI+V   
Sbjct: 179 SFASVEVVPEVDENVEVEIDPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQ 238

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG- 314
            E+SQ  NR  AMK+L+++L ++E K+   E       +  IG G+   +IR+Y F    
Sbjct: 239 KERSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGN---QIRSYVFQPYA 295

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            + DHR N  +  ++ V+ G IDD IN  L  
Sbjct: 296 LVKDHRTNTEIGNVKAVMDGSIDDFINSYLRW 327


>gi|300726271|ref|ZP_07059724.1| peptide chain release factor 2 [Prevotella bryantii B14]
 gi|299776468|gb|EFI73025.1| peptide chain release factor 2 [Prevotella bryantii B14]
          Length = 376

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 96/361 (26%), Positives = 158/361 (43%), Gaps = 20/361 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   K  F E +LR       D      E+   +  I   +  Y + +Q   +L      
Sbjct: 23  IDQKKVEFEEEQLRTQAPDFWDDPKYAQEQMKKVKEIQKWLDGYKEVRQYADELQLAFEF 82

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           +  +    +    +     K I  LE       + +  +D    +L+I +G GG+E+  +
Sbjct: 83  YKDEMVTEEEVDDDYAKAIKAIENLEL----KNMLRQEEDSMDAVLKINSGAGGTESQDW 138

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-RGVFSRMKFESGVHRVQR 187
              L RMY R+     + V++ +  D D+ G K +  TI G    +  +K E+GVHR+ R
Sbjct: 139 ASMLMRMYMRWCEAHGYSVKITNMQDGDEAGIKSVEMTIEGGEFAYGFLKSENGVHRLVR 198

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRI 246
           V    A G+  TS A+V V P   +          +  DT R+ G+GGQ+VN  +S VR+
Sbjct: 199 VSPYNAQGKRMTSFASVFVTPLVDDTIEIYVDPAKVSWDTFRSGGAGGQNVNKVESGVRL 258

Query: 247 THIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KL 295
            +             ++  +  + Q +NR +AM +L+++LYD   KR   E++     K 
Sbjct: 259 RYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKRKQAEQAKVEAGKK 318

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           +I  G    +IR+Y F   R+ DHR N     ++ V+ G +D+ I   L    A    SA
Sbjct: 319 KIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMDGKLDEFIKSYLMEFAAVDAASA 375

Query: 356 S 356
            
Sbjct: 376 E 376


>gi|123965444|ref|YP_001010525.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9515]
 gi|123199810|gb|ABM71418.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9515]
          Length = 354

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 171/343 (49%), Gaps = 6/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L  +  E+E   +E           +    +  +  ++ + D+ K    D    + 
Sbjct: 7   DVPSLVAKRKELEQIAAEPDFWINQAAAKKHMLNLDDVRDQLQLLDKWKILIADAEASLE 66

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            ++ D E  +   +E       +RE  ++  +  L     D +S I+ I AG GG++A  
Sbjct: 67  LYSLDPE--EEMIVESHLGLVTLRENLDKWEFQRLLSGEYDKESAIVSINAGAGGTDAQD 124

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  L RMY R+A      +E+   S+ ++ G K +   ++G+  +  ++ E G HR+ R
Sbjct: 125 WVEILLRMYSRWADNNGMSLEITDLSNGEEAGIKSVTFEVNGKYAYGYLQNEKGTHRLVR 184

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS A V V+P+    I ++IP +D+ I T R+ G+GGQ+VN  ++AVRI
Sbjct: 185 ISPFNANGKRQTSFAGVEVMPKLDQSISLEIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+P+GI V  + E+SQ QN+ +AM +L+A+L  + +++ A E S   K  I       +
Sbjct: 245 LHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRAAEISDI-KGDIVEAAWGNQ 303

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR Y F   + + D R       L+ VL G +D  I+ LL  +
Sbjct: 304 IRNYVFHPYQMVKDLRTMKETNDLDGVLNGGLDQFIHELLRMN 346


>gi|297171212|gb|ADI22220.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0200_34B24]
 gi|297171327|gb|ADI22332.1| protein chain release factor B [uncultured actinobacterium
           HF0500_01C15]
          Length = 325

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 152/329 (46%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+E    D            + +   +  +       +           + E       E
Sbjct: 1   MAEPGFWDDQESARAVIDESNRLKGWVEPWKALAG--KGSELEALAELLEEEEDAELAGE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                  +++    +    + +  +D +  I+ +  G GG E+  +   L RMY R+A  
Sbjct: 59  FEEELAVLQKSVEALELKTMLRGDEDHREAIVTLHPGAGGLESQDWAQMLMRMYTRWAER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R ++V VL      + G K     I G  V+  +K E GVHR+ R+   +A  R HTS  
Sbjct: 119 RGFQVNVLDLQPAQEAGIKSATLEIKGESVYGYLKAERGVHRLVRISPFDAQSRRHTSFT 178

Query: 203 TVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V P    +I+V+I   D+RIDT RASG+GGQHVN TDSAVRITH PT I+V    E+
Sbjct: 179 SVFVYPLVEDDIEVEINEADLRIDTYRASGAGGQHVNKTDSAVRITHEPTNIVVSCQQER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RIT 317
           SQH+NR  AMK+LRA LY    +    E++     K  IG G    +IR+Y F     + 
Sbjct: 239 SQHKNRSTAMKMLRAALYQRALEEKEKEKAAIEESKADIGFG---SQIRSYVFQPYTMVN 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           DHR    +  +  V+ G +D +I   L  
Sbjct: 296 DHRTETKIGDVHGVMDGDLDPLIEAYLKQ 324


>gi|157134367|ref|XP_001663262.1| mitochondrial peptide chain release factor [Aedes aegypti]
 gi|108870516|gb|EAT34741.1| mitochondrial peptide chain release factor [Aedes aegypti]
          Length = 422

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 192/351 (54%), Gaps = 11/351 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            K + ++  R     L++S+           +  A +S ++               L  +
Sbjct: 68  QKYLENI--RLEYYALKVSDQLDKKDI----KRMALLSHVVEMYEQRRIIMDNLNSLQEM 121

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + + D       + E         + E     L +  D +D  + ILE+ AG GG EA
Sbjct: 122 SAEKDEDMLQLMREEKEAYTNILRKLDGEIMNGILSM-DDEEDYNTLILEVAAGVGGQEA 180

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            LF  +LF MY  +   + W+ EV+ + D + GG +     + GR  +  +KFE+GVHRV
Sbjct: 181 MLFSRELFDMYCGFIDYKGWETEVIETEDTELGGIRHASIVVHGRDAYRYLKFEAGVHRV 240

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE S R+HTS ATV+V+P   E ++++  +D++I+T RASG+GGQHVNTTDSAVR
Sbjct: 241 QRVPTTEKSARIHTSTATVSVIPRPDEFEIELKDKDLKIETKRASGAGGQHVNTTDSAVR 300

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTG+ V   +E+SQ +N+  A + L A+L   E +   N   + +K Q+GS  R+E
Sbjct: 301 IVHLPTGMAVECQTERSQVKNKEIAKQKLLAKLTQQELESKFNATQSMKKSQVGSSLRNE 360

Query: 305 RIRTYNFSQGRITDHRI-NLTLYKLEYVLQG--YIDDIINPLLTAHQAKMI 352
           +IRTYN++Q RITDHR+   T + L+  L+G   ++D+I  L   H+ K +
Sbjct: 361 KIRTYNYNQDRITDHRVDGGTTHNLKAFLEGGSQLEDMIAKLQAMHRKKQL 411


>gi|260102492|ref|ZP_05752729.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
           20075]
 gi|260083697|gb|EEW67817.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
           20075]
          Length = 332

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 164/329 (49%), Gaps = 10/329 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M ++   D      +  +  + +  K   + + +Q+ +D   +       +E     Q E
Sbjct: 1   MMQTGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYED--ELTALELLRAEPDADLQQE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V    K+++E  +     LL     D  + +LEI  G GG+EA  +   LFRMY+RY   
Sbjct: 59  VETDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDA 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             +K E+      ++ G K +   ISG   +  +K E+GVHR+  +   +A+ R HTS A
Sbjct: 119 AGFKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVIISPFDAAKRRHTSFA 178

Query: 203 TVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
           +V V+PE  +         D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ QNR  AM  LRA+L+ +E ++   ++ A +  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWG---SQIRSYVFHPYNLVK 295

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           D R       +  V+ G +   I   L  
Sbjct: 296 DLRTGYETADVNGVMDGKLQPFIYSYLQW 324


>gi|302190497|ref|ZP_07266751.1| peptide chain release factor 2 [Lactobacillus iners AB-1]
          Length = 332

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 103/327 (31%), Positives = 164/327 (50%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    +      +   A + +  K+  Y        D  T +  +N + E   L +I 
Sbjct: 1   MADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSSALADAKTAVELYNMEPENDMLMEIT 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
               + +     N     LL     DD + +LEI +G GG+EA  +   LFRMY+R+   
Sbjct: 61  AEVEKLKNEF--NNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWANMLFRMYQRWCDS 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
                EV      D+ G K +   + G   F  +K E+GVHR+ R+   +++ R HTS A
Sbjct: 119 HNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRISPFDSAKRRHTSFA 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V+PE  +  +++I  +D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++
Sbjct: 179 SVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QNR  AM +LRA+L+ +E  +   +  A +  Q    +   +IR+Y F     + DH
Sbjct: 239 SQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQ-KEINFGSQIRSYVFHPYNMVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R +        V+ G +D  I   L  
Sbjct: 298 RTDYETSDTIGVMNGNLDPFIYAYLQW 324


>gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
 gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
          Length = 319

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 97/317 (30%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   ++     ++  ++  +L  +         + D  +      E+  +    
Sbjct: 1   MREKTQLENALTGTRELERDLRDSLELIELAEAEGDAEMVADAEKTIAALKERAAKM--- 57

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D   C LE+ +G GG+E+  +   L RMY R+A    +KV+ L  +  
Sbjct: 58  --ELESLLSGEADANDCFLEVNSGAGGTESQDWALMLLRMYTRWAEQHGYKVDELDETPG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID- 214
           ++ G K     I G   +  +K ESGVHR+ R+   ++  R HTS A+V+V P   +   
Sbjct: 116 EEAGIKSATIQIKGHNGYGWLKTESGVHRLVRISPFDSQARRHTSFASVSVTPVIDDRIV 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V+I  +D+++DT R+SG+GGQHVN TDSAVR+TH+PTGI+V    E+SQH+NR +A  +L
Sbjct: 176 VEINEKDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVACQQERSQHKNRAKAWDML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RAR+Y++E ++     +A    K +IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARIYEMELRKREEAAAALEATKTEIGWG---HQIRSYVLQPYQMVKDLRTGVETSDSGG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGDLDRFLQAALAQR 309


>gi|289663374|ref|ZP_06484955.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289668830|ref|ZP_06489905.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 276

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 100/253 (39%), Positives = 139/253 (54%), Gaps = 7/253 (2%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
            +  +     D  +  ++I+AG GG+EA  +   L RMY R+A  R WK E++  S  + 
Sbjct: 16  EFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEV 75

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVD 216
            G K     I G   +  +K E GVHR+ R    ++  R HTS  +V V PE    I++D
Sbjct: 76  AGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEID 135

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           I   D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQNR  AMK+L A
Sbjct: 136 INPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAA 195

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LY++E ++   ER A    K  IG G    +IR Y   Q RI D R  +     + VL 
Sbjct: 196 KLYELEVQKRNVERDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTGIERSDTQKVLD 252

Query: 334 GYIDDIINPLLTA 346
           G +D+ +   L A
Sbjct: 253 GDLDEFVEASLKA 265


>gi|326915756|ref|XP_003204179.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Meleagris gallopavo]
          Length = 393

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 137/315 (43%), Positives = 211/315 (66%), Gaps = 5/315 (1%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
           + + ++I     K++E +D   +     S+ ++R LA+ E+++ E+EI EL+++I  LL+
Sbjct: 74  TELAARIQRLRDKERELRDTRELALQDESE-DLRKLAEREIVSCEEEIAELKHQIVLLLI 132

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
           P   + +   ++E+ AG GG EA LF  ++F MY RYAA +KWK E+L    ++ GG + 
Sbjct: 133 P-SEETNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRH 191

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDI 222
            VA+I+G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  E+++ I  +D+
Sbjct: 192 AVASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEMELKINPKDL 251

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVE 281
           RI+T RASG+GGQHVNTTDSAVRI HIPTG+      E+SQ +N+ +AM++L A+LY+++
Sbjct: 252 RIETKRASGAGGQHVNTTDSAVRIVHIPTGVASECQQERSQIRNKEKAMQMLCAKLYNIK 311

Query: 282 RKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDI 339
            +    +R++ RK+QIG+  RSE+IRTYNF Q RITDHRI+ +++ +E  + G   +D++
Sbjct: 312 LEEETKKRNSVRKIQIGTKGRSEKIRTYNFPQDRITDHRISRSVHHIECFMLGEEMLDEM 371

Query: 340 INPLLTAHQAKMIGS 354
           I  L      + +  
Sbjct: 372 IQTLKEYANYESLME 386


>gi|295099339|emb|CBK88428.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           cylindroides T2-87]
          Length = 316

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 130/305 (42%), Positives = 184/305 (60%), Gaps = 6/305 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              ++  L  R+ EI   M  S  V       KL  E   ++PI+   + Y Q K+E ++
Sbjct: 4   MEDRLDSLVERYNEINELMMSSSVVSDRKQMAKLGREQNELTPIVETYAEYKQAKEEFEE 63

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             T+      D E+R+LA  E+  +E  I+E  + +  LL+PKD +D  +  +EIR   G
Sbjct: 64  AKTL--QKEDDKELRELANAEIERLEPAIKEYLDRLELLLVPKDPNDSHNAFMEIRGAAG 121

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA +F GDLFRMY +YA  + WKVEV  S D++ GG+  I   ++G+  +  +KFESG
Sbjct: 122 GDEANIFAGDLFRMYAKYAESKGWKVEVTDSEDSEAGGFSLITFKVTGQNAYGTLKFESG 181

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HRVQRVP TE+ GR+ TS ATV   PE  E D DI + D+ I+ MRASG+GGQHVN TD
Sbjct: 182 SHRVQRVPKTESQGRIQTSTATVLCYPELDEEDFDIDMNDLEIEAMRASGAGGQHVNKTD 241

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H PTGI+V     +SQH+NR  A+  + AR+ +  ++ +  +  A R+ +IG+G
Sbjct: 242 SAVRIVHKPTGIVVKCQDGRSQHENRATALATIAARVKEEHQRELDEKAGAERRTKIGTG 301

Query: 301 DRSER 305
           DR+ER
Sbjct: 302 DRAER 306


>gi|312879986|ref|ZP_07739786.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas
           paucivorans DSM 12260]
 gi|310783277|gb|EFQ23675.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas
           paucivorans DSM 12260]
          Length = 374

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 11/349 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            +   + R   +  + ++      +   + T E A +          +++ QE + L  +
Sbjct: 25  DLPAAETRIEGLLKQAADPEFWTREDAQETTRELAQLQQKRESWETLNRELQEMETLAAL 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +        +              +        +L  +  D    I+ I AG GG ++
Sbjct: 85  LAEGEDVDLEEEF-----YRRAGAFEKELERRQIFVLLDEEYDRSDAIVTIHAGAGGLDS 139

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+     +K  +L    + + G K I   + G   +  +K E GVHR+
Sbjct: 140 QDWTEILSRMYLRWVEKEGFKSRILDQLADQEAGIKSITFEVLGDYAYGYLKGEKGVHRL 199

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ R HTS A+V VLP    + D++I  ED+++DT R+SG+GGQ+VN TDSAV
Sbjct: 200 VRISPFDAAKRRHTSFASVEVLPVLPEDADIEIRPEDLKMDTFRSSGAGGQYVNMTDSAV 259

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPTGI+V    E+SQH NR  A++VL+++L++ + +       +  + +  S    
Sbjct: 260 RITHIPTGIIVSCQVERSQHMNRATALQVLKSKLFERQLQERQEHLESL-QGEKRSIAWG 318

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y     + + DHR    +  +  VL G ++++I   L   +   
Sbjct: 319 SQIRSYTLQPFQLVKDHRSGCEVGNVAAVLDGDLEELIMSTLRFFKTGR 367


>gi|254850994|ref|ZP_05240344.1| peptide chain release factor 2 [Vibrio cholerae MO10]
 gi|258620333|ref|ZP_05715371.1| peptide chain release factor 2 [Vibrio mimicus VM573]
 gi|258624704|ref|ZP_05719638.1| peptide chain release factor 2 [Vibrio mimicus VM603]
 gi|254846699|gb|EET25113.1| peptide chain release factor 2 [Vibrio cholerae MO10]
 gi|258582991|gb|EEW07806.1| peptide chain release factor 2 [Vibrio mimicus VM603]
 gi|258587212|gb|EEW11923.1| peptide chain release factor 2 [Vibrio mimicus VM573]
          Length = 248

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 99/248 (39%), Positives = 145/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C L+++AG+GG+EA  +   L RMY R+A  + +K EV+  S+ D  G K
Sbjct: 1   MFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE  E  D++I   
Sbjct: 61  SATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|51891274|ref|YP_073965.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
           14863]
 gi|51854963|dbj|BAD39121.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
           14863]
          Length = 308

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 108/308 (35%), Positives = 158/308 (51%), Gaps = 7/308 (2%)

Query: 50  SIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
              +  ++   DL  +I      S+    A+    A   E +    +    +L     D 
Sbjct: 2   EQLESFRRRLDDLEVMIDLAEEASDAEMAAEARAEADALEEQV--RQFELQVLLNGKYDA 59

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
            + IL I AG GG+EA  +   L RMY R+A  R +KVE L   D D+ G K +   + G
Sbjct: 60  YNAILTIHAGAGGTEAQDWAEMLLRMYVRWAERRGFKVEELDRLDGDEAGIKSVTIAVRG 119

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTM 227
              +  ++ E GVHR+ R+   +ASGR HTS A V V+PE  +   D  I  ED+RIDT 
Sbjct: 120 PYAYGFLRPEMGVHRLVRISPFDASGRRHTSFAAVEVMPEIEDDVDDIEIRPEDLRIDTF 179

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+SG+GGQHVN T+SAVRITH+PTGI+V    E+SQ QNR  AM +LR++L +++ +   
Sbjct: 180 RSSGAGGQHVNKTESAVRITHLPTGIVVSCQQERSQMQNRAVAMMMLRSKLVELKIEEQN 239

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            E +  R  Q+       +IR+Y F     + DHR  + +   + V+ G +D  I   L 
Sbjct: 240 KEMAQIRGPQME-IAWGSQIRSYVFQPYTLVKDHRSGVEVGNAQAVIDGELDPFIYGYLE 298

Query: 346 AHQAKMIG 353
                 + 
Sbjct: 299 KRANGELA 306


>gi|330919897|ref|XP_003298803.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
 gi|311327840|gb|EFQ93110.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
          Length = 416

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 117/367 (31%), Positives = 197/367 (53%), Gaps = 26/367 (7%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            + +   E+  +++         +  ++    SPI+S +  +D+  +   +L ++I D  
Sbjct: 46  AITSEHKELTEKLANGFD----TRAAKKLGEYSPIVSALGEWDKANESVTELTSMIHDST 101

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D E+R LA  ++     ++      +   L+P        C+LEIR G GGSEAA+F G
Sbjct: 102 TDPELRSLASDDLEETRTQLVNASQSLITSLVPVHPFAHLPCLLEIRPGAGGSEAAIFAG 161

Query: 131 DLFRMYERYAALRKWKVEVL---SSSDNDDGGY--KEIVATISGRGVFSRMKFESGVHRV 185
           DLFRMY  +     ++  ++   + +   + G    E +  +     +   + E+GVHRV
Sbjct: 162 DLFRMYSAFCNRNGFRTNLIKYENINGTSEAGVPLSEAIMEVENENAYGVFRCEAGVHRV 221

Query: 186 QRVPATEASGRVHTSAATVAVLP------------EAAEIDVDIPLEDIRIDTMRASGSG 233
           QRVPATE  GR HTSAA+V VLP            +  E D  I  ++++++ MRASG+G
Sbjct: 222 QRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYYIDPKEVKLEVMRASGAG 281

Query: 234 GQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQHVN T+SAVR+THIPT  +V     +SQH+N+ +A  +LRAR+    R++   E +  
Sbjct: 282 GQHVNKTESAVRLTHIPTNTVVAMQDSRSQHKNKEKAWALLRARIAQTRREKREEEMANM 341

Query: 293 RKLQIG--SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQ 348
           R+  IG     R +++RTYN+ Q R+TDHR  +T++ L+ V+ G   +D ++  + +   
Sbjct: 342 RRSVIGVAKMGRGDKVRTYNWGQQRVTDHRSGMTVHDLDDVMGGGQTLDKVMESVRSWLM 401

Query: 349 AKMIGSA 355
            + + + 
Sbjct: 402 ERDVEAL 408


>gi|160891387|ref|ZP_02072390.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492]
 gi|270295480|ref|ZP_06201681.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478476|ref|ZP_07937636.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36]
 gi|156858794|gb|EDO52225.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492]
 gi|270274727|gb|EFA20588.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905365|gb|EFV27159.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36]
          Length = 371

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 156/372 (41%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +   +                      D       +   +  + 
Sbjct: 1   MITAEQLKDIKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             IS Y++ K    ++      +  +    +            +  LE +          
Sbjct: 61  QWISGYNEVKTLTDEVQLAFDFYKDELVTEEEVDDAYAKAITAVEALELKNMLREEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ G K     
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKTCTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           ISG   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I    +  D
Sbjct: 177 ISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEPARMSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  A+++LR+ 
Sbjct: 237 TFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENALRLLRSM 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|313675052|ref|YP_004053048.1| bacterial peptide chain release factor 2 (brf-2) [Marivirga
           tractuosa DSM 4126]
 gi|312941750|gb|ADR20940.1| bacterial peptide chain release factor 2 (bRF-2) [Marivirga
           tractuosa DSM 4126]
          Length = 363

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 157/341 (46%), Gaps = 12/341 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
                   E+EL  ++    +   +  +    I  +      +D+  +   ++ T     
Sbjct: 23  NKKVEEIKELELVSAQPDFWNDSDEAEKTMKVIQGLKEWTKHFDELSELYGEVETYYEFL 82

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
                  +           +  ELE       +    +D  S +L+I  G GG+E+  + 
Sbjct: 83  EMGESSEEEVSKAYKKALTKTEELEL----KKMLSSEEDQLSAMLQITPGAGGTESNDWA 138

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
           G L RMY  +     +KV  +   + D  G K +     G   +  +K E+GVHR+ R+ 
Sbjct: 139 GILMRMYIMWGEANGYKVREVDFQEGDVAGVKSVTLEFDGPQAYGFLKSENGVHRLVRIS 198

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             ++ GR HTS A+V V P     I++DI   D+ + T R+ G+GGQ+VN  ++ V++TH
Sbjct: 199 PFDSGGRRHTSFASVYVYPVVDDSIEIDIHPNDVELHTSRSGGAGGQNVNKVETKVQLTH 258

Query: 249 IPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSER 305
            PTGI +V  + ++Q  NR  AMK+L+++LY +E ++ + ER+     K +I   D   +
Sbjct: 259 KPTGIVVVCQANRTQLGNREEAMKMLKSQLYQIEVEKRSAERNEVEAGKKKI---DFGSQ 315

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR Y     + I D R  +    ++ VL G ++D I   L 
Sbjct: 316 IRNYVLHPYKLIKDARTGVERTDVQNVLDGDLNDYIKAYLM 356


>gi|224048051|ref|XP_002187712.1| PREDICTED: mitochondrial translational release factor 1-like
           [Taeniopygia guttata]
          Length = 421

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 139/293 (47%), Positives = 199/293 (67%), Gaps = 4/293 (1%)

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            N + + R LA+ E+ + E+EI EL+ +I  LL+P +  D+   ++E+ AG GG EA LF
Sbjct: 122 ANENEDFRKLAEREIASCEEEIAELKQQIVLLLIPSEETDESDLVMEVTAGVGGQEAMLF 181

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
             ++F MY+RYAA +KWK EVL    ++ GG +  VA+I+G   +  MKFE GVHRVQRV
Sbjct: 182 TSEIFDMYQRYAAYKKWKFEVLEYFPSELGGLRHAVASIAGLEAYKYMKFEGGVHRVQRV 241

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P TE  GR+HTS  TVA+LP+  E+ + I  +D+RI+T RASG+GGQHVNTTDSAVRI H
Sbjct: 242 PKTEKQGRIHTSTMTVAILPQPTEMRLQINPKDLRIETKRASGAGGQHVNTTDSAVRIVH 301

Query: 249 IPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPTGI+     E+SQ +N+ +AM++L A+LY+ + +    +R+  RK+QIG+  RSE+IR
Sbjct: 302 IPTGIVSECQQERSQIRNKEKAMQMLCAKLYNAKLEEETKKRNYARKIQIGTKGRSEKIR 361

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLT-AHQAKMIGSASE 357
           TYNF Q RITDHRI+ +++ +E  + G   +D++I  L   A    ++   SE
Sbjct: 362 TYNFPQDRITDHRISRSVHHVESFMLGEEMLDEMIQTLREYADYESLMEIISE 414


>gi|49474202|ref|YP_032244.1| peptide chain release factor 2 [Bartonella quintana str. Toulouse]
 gi|49239706|emb|CAF26082.1| Peptide chain release factor 2 (rf-2 [Bartonella quintana str.
           Toulouse]
          Length = 322

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 163/318 (51%), Gaps = 13/318 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E   +   IS I  + +  +E  +L  +  + +    I D   +      +  +   
Sbjct: 1   MMRERQRLDDSISGIQSFTKTLEECIELIAMGEEESDVEIITDAENLIRNLKNEIDK--- 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                 +L     D     LE+ AG GG+E+  +   L RMY R+A   K KVE+L   D
Sbjct: 58  --RQIDMLLSREADPNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            ++ G K     + G   +  +K ESGVHR+ R+   +++ + HTS A++ V P     I
Sbjct: 116 GEEAGIKSATIFVKGHNAYGLLKTESGVHRLVRISPYDSNAKRHTSFASIWVYPVIDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +VD+   D+RIDT R+SG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR  A  +
Sbjct: 176 EVDVSESDVRIDTYRSSGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSM 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           LRARLY+ E K+   + +   + K +IG G    +IR+Y     + + D R  +     +
Sbjct: 236 LRARLYEQELKKREEKTNAVESSKTEIGWG---HQIRSYVLQPYQLVKDLRTGVENTDPQ 292

Query: 330 YVLQGYIDDIINPLLTAH 347
            VL G +D  I   L   
Sbjct: 293 SVLNGNLDAFIEAALAQR 310


>gi|290982185|ref|XP_002673811.1| predicted protein [Naegleria gruberi]
 gi|284087397|gb|EFC41067.1| predicted protein [Naegleria gruberi]
          Length = 324

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 148/308 (48%), Positives = 196/308 (63%), Gaps = 16/308 (5%)

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +  +  S++EI      E L        + +  ++ + P       + I+EIR GT
Sbjct: 9   ELKQLAKEEYSETEIEYSKTQERLISVLLNAPVSDTEDHQISPNS-----NAIIEIRPGT 63

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRG-------- 171
           GG EA+LF  +LF+MYE YA  R WK EVLS S N+ G G KE +A ISG          
Sbjct: 64  GGDEASLFAMELFKMYEFYATKRGWKFEVLSLSANNGGEGCKEGIALISGSSYGDDEGLG 123

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
           V+  MKFESGVHRVQRVPATE+ GRVHTS+A++ VLPE  E DV I L D+RIDTMRASG
Sbjct: 124 VYGCMKFESGVHRVQRVPATESQGRVHTSSASIVVLPEVTEADVKINLADVRIDTMRASG 183

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQHVNTTDSAVR+THIPTG +V  + E+SQH+N+ +A K+L +RLY  ++     + S
Sbjct: 184 AGGQHVNTTDSAVRLTHIPTGTVVCIADERSQHRNKEKAFKILHSRLYQKQQDEKIQKMS 243

Query: 291 ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQA 349
           + RK QIGSGDRS++IRTYNF Q RITDHRI+ + + L+ ++ G  +D     L    + 
Sbjct: 244 SERKEQIGSGDRSDKIRTYNFPQDRITDHRISFSQFGLDKMMDGEILDSFFEILAKQEKI 303

Query: 350 KMIGSASE 357
           +      E
Sbjct: 304 QQFERLFE 311


>gi|50954999|ref|YP_062287.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951481|gb|AAT89182.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 372

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 163/352 (46%), Gaps = 7/352 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+   A++  R       D  +   +  +A+S   S+++     +Q   DL  ++ 
Sbjct: 25  DVDKLRAAIADLSERAGAPDLWDDPVNAQKVTSALSHRQSELARITAIQQRLDDLEVLVE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             N   +    A+        +      ++    L     D+++ I+ IR+G GG +A  
Sbjct: 85  LANEGDDEESAAEARAELEALQKAL--GDLEVQTLLSGEYDERAAIVTIRSGAGGDDATD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+A   K+ V V+ +S  +  G K     +     F  +  E+G HR+ R
Sbjct: 143 FAEMLLRMYLRWAEQHKYPVTVMDTSYAEGAGIKSATFEVDMPYAFGTLSVEAGTHRLAR 202

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    ++ +  TS A V V+P       VD+P  DIR+D  R+SG GGQ VNTTDSAVR+
Sbjct: 203 ISPFGSADKRQTSFAAVEVIPLMEEANQVDVPEGDIRVDVFRSSGPGGQSVNTTDSAVRL 262

Query: 247 THIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V+  +EKSQ QNR  AM+VL+ RL  ++++  A ++         +    ++
Sbjct: 263 THLPTGIVVSMQNEKSQIQNRAAAMRVLQTRLLLLQKEEEAAKKKELAGNI--TASWGDQ 320

Query: 306 IRTY-NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +R+Y  + Q  + D R          V  G +D  I   +         +  
Sbjct: 321 MRSYFLYGQQLVKDLRTGYESGNPATVFDGDLDGFIAAGIRWRAGSKAEAQG 372


>gi|290476399|ref|YP_003469304.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004]
 gi|289175737|emb|CBJ82540.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004]
          Length = 286

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 98/289 (33%), Positives = 160/289 (55%), Gaps = 12/289 (4%)

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +  + + +    +       A  +++ E   ++ +  +     D  +C L+++AG+G
Sbjct: 4   LLELAVEADDEETFNEAV-----AELEQLEEKLGQLEFRRMFSGQYDSANCYLDLQAGSG 58

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G+EA  +   L RM+ R+A  + +K E++  SD D  G K     I G   +  ++ E+G
Sbjct: 59  GTEAQDWASMLMRMFLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETG 118

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           VHR+ R    ++ GR HTS ++  + PE   +ID++I   D+RID  RASG+GGQHVN T
Sbjct: 119 VHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKT 178

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQI 297
           +SAVRITHIPTG++    +++SQH+N+ +AMK L+A+LY++E ++   ++      K  I
Sbjct: 179 ESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQLKAKLYELEMQKKNADKQAMEENKSDI 238

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           G G    +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 239 GWG---SQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 284


>gi|226354826|ref|YP_002784566.1| peptide chain release factor 2 [Deinococcus deserti VCD115]
 gi|226316816|gb|ACO44812.1| putative Peptide chain release factor 2 (RF-2) [Deinococcus deserti
           VCD115]
          Length = 383

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 104/355 (29%), Positives = 173/355 (48%), Gaps = 16/355 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I     R  E++  +S+    +      ++T+E   +  I+   S      Q   ++  
Sbjct: 35  DIPGKTRRLNELDRELSDPELWNDQSRARQVTQESGTLRRIVESYSSLHSDAQGLNEMLE 94

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   +  + + + ++    E     L               D + I+ ++ G GG+E
Sbjct: 95  IADEEEREMLVEEQSSLQTRVDELYRETL---------FTMKHADTAAIVRVKGGAGGTE 145

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  + G L RMY R+A  R +KV++L     D  GY+ I   I G   +  M  E GVHR
Sbjct: 146 AQDWAGMLARMYMRWAERRGYKVDILDEQPGDQAGYQSIEFIIRGEKAYGMMAAEHGVHR 205

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED--IRIDTMRASGSGGQHVNTTDS 242
           + RV   +++ R  TS A+V V+PE  E +++I + D  +R D  R+ G+GGQ VNTTDS
Sbjct: 206 LVRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDS 265

Query: 243 AVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH+PTGI +     +SQ +N   A+++L+ RLYD+E K+   E +A R  Q    +
Sbjct: 266 AVRLTHLPTGIAVACQITRSQIKNAELALQILKQRLYDIEVKKREAEEAAARGAQAK-VE 324

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
              ++R+Y   +  I DHR  L  +  + VL G +D+++   L     K +    
Sbjct: 325 WGSQMRSYVLDKQYIKDHRTGLMKHNPDDVLDGDLDELMWAGLEWMAGKRVAEEG 379


>gi|308126586|ref|ZP_05911115.2| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037]
 gi|308107642|gb|EFO45182.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037]
          Length = 260

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 98/260 (37%), Positives = 151/260 (58%), Gaps = 7/260 (2%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + E   ++ +  +     D+  C ++++AG+GG+EA  +   + RMY R+A  + +K EV
Sbjct: 1   MEEKLAQLEFRRMFSGDHDNSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           +  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE
Sbjct: 61  IEVSEGEVAGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 210 AAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
             E   +DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ 
Sbjct: 121 IDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 268 RAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
           +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  +  
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVEN 237

Query: 326 YKLEYVLQGYIDDIINPLLT 345
              + VL G +D  I   L 
Sbjct: 238 RNTQAVLDGDLDKFIEASLK 257


>gi|288929843|ref|ZP_06423686.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288328944|gb|EFC67532.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 372

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 89/373 (23%), Positives = 157/373 (42%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D++ R   +   +                      D   +  E+   +  I 
Sbjct: 1   MITADQLKDIQERAEALHRYLDIDHKRVELEEEELRTQAPDFWDDPARAQEQMKKVKGIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y + +Q   +L      ++ D    +    +       +  LE         +  
Sbjct: 61  KWIVGYKEVRQAADELQLAFDFYHDDMVTEEEVDEDYRKAITAVENLELMNM----LRQK 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+L+I +G GG+E+  +   L RMY R+A     +V + +  + D+ G K +   
Sbjct: 117 EDPMDCVLKINSGAGGTESQDWAQMLMRMYMRWAESHGHRVTISNLQEGDEAGIKSVTME 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRI 224
           I G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 IEGGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           D  R+ G+GGQ+VN  ++ VR+ +  T          ++  +  + Q +NR  AM++L++
Sbjct: 237 DLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+    ++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRLEAQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTADVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G IDD I   L  
Sbjct: 354 GKIDDFIKAYLME 366


>gi|88658024|ref|YP_507510.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599481|gb|ABD44950.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 366

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 179/346 (51%), Gaps = 12/346 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           H  I +L +  A++ L+ S +   D            + I   ++ + + ++E      +
Sbjct: 24  HLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFTELEEEYNYYTEL 83

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +   N+D++       E+ A   +++E   +     L  +  D   C +EI++G GG+E+
Sbjct: 84  LSVINNDTDEL---LNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFIEIQSGAGGTES 140

Query: 126 ALFVGDLFRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
             +   LFRMY R+A     +K E++   D ++ G K     + G   +   K ESG+HR
Sbjct: 141 NDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHR 200

Query: 185 VQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    ++ + HT+ +++ V P    + +++I  +D+RIDT RASG+GGQHVN T+SA
Sbjct: 201 LVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESA 260

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSG 300
           VRITHIP+GI+V   + +SQHQN   A  +L++RLY ++ +    + +    ++  IG G
Sbjct: 261 VRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWG 320

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +   +IR+Y     + + D R    +  +  VL G +D  I   LT
Sbjct: 321 N---QIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISALT 363


>gi|46446965|ref|YP_008330.1| peptide chain release factor RF-2 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400606|emb|CAF24055.1| probable peptide chain release factor RF-2 [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 326

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 167/327 (51%), Gaps = 6/327 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M ES   +   +          + +    Y + K + ++   ++ +    +E  +    E
Sbjct: 1   MGESSFWNNSEQAQLIINECRDLRAWTVPYQELKTKFENCKELLPEAYELNE--ESFIEE 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +L     I ++  ++    +     D+K C L I +G GG+EA  +   L RMY+R+AA 
Sbjct: 59  LLRDLDSIEKVLGDLEVQRMLSGEMDNKDCYLTINSGAGGTEACDWAQMLSRMYQRWAAK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + WK+E++   D D  G K I     G   +   K E GVHR+ R+   +++ + HTS A
Sbjct: 119 KGWKIEIIDFVDGDVVGLKSITLRFQGSYAYGYSKAEKGVHRLVRISPFDSNAKRHTSFA 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V PE   +I V+I  ED+R+DT R+SG+GGQHVN TDSAVR+TH+PTGI+V   +++
Sbjct: 179 SVDVSPEITTDIQVEIKPEDVRVDTFRSSGAGGQHVNKTDSAVRLTHMPTGIVVSCQTQR 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QN+    ++LR++LY++E        +   K +        +IR Y F     + D 
Sbjct: 239 SQVQNKEACYQMLRSKLYEMEVLEREKALNNL-KGEKKENAWGSQIRNYVFQPYTLVKDT 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTA 346
           R       ++ V+ G +D+ +N  L  
Sbjct: 298 RTKAESGNIQAVMDGELDEFVNAYLKE 324


>gi|303247215|ref|ZP_07333489.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
 gi|302491374|gb|EFL51262.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
          Length = 307

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 115/308 (37%), Positives = 165/308 (53%), Gaps = 14/308 (4%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++  I         + +  +  ++  D  S   +  LA+             E     L 
Sbjct: 2   LTSRIEDGEKLLAARTDLDEWLSLAKDDGSPEVLDALAEQIATLDG------ELADAELA 55

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
               ++D+   ILEI  G GG+EA  +   L RMY R+A  +++ V++L     D+ G K
Sbjct: 56  AFFRSEDNVDAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKEFGVKILDYLPGDEAGLK 115

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLE 220
            +    SG   +  +  E G+HR+ R+   ++SGR HTS A+V V P+A  +ID+DI  +
Sbjct: 116 SVTLQFSGPYAYGMLAAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGVDIDIDIKED 175

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG GGQHVN T SA+RITH+PTGI+V   +EKSQH+NR  AMKVL+ARLYD
Sbjct: 176 DLRIDVFRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRETAMKVLKARLYD 235

Query: 280 VERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYI 336
           +E K++  E+      K  IG G    +IRTY     R + DHR  +    +E VL G +
Sbjct: 236 LELKKLQAEKQESYESKNAIGFG---SQIRTYTMQPYRLVKDHRTGVDAGDVEAVLDGDL 292

Query: 337 DDIINPLL 344
           D  I   L
Sbjct: 293 DKFIRGYL 300


>gi|319408605|emb|CBI82260.1| peptide chain release factor RF-2 [Bartonella schoenbuchensis R1]
          Length = 323

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 117/322 (36%), Positives = 163/322 (50%), Gaps = 13/322 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E   +   I+ I ++ Q  +E  +L  +  + + +  I D          +  +   
Sbjct: 1   MMRERQCLEDSINGIRLFTQTLEECIELIAMGEEESDEEIITDAENTIRKLKSEIDK--- 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                 LL     D     LEI AG GG+E+  +   L RMY R+A   K KVEVL   D
Sbjct: 58  --RQIDLLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLEIHD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS A+V V       I
Sbjct: 116 GEEAGIKSATILVKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVYSVVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   DIRIDT RASG+GGQHVNTTDSAVRITHI TGI+V    E+SQH+NR  A  +
Sbjct: 176 EIDISESDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSM 235

Query: 273 LRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           LRARLY+ E K+   E +A    K +IG G    +IR+Y     + + D R  +     +
Sbjct: 236 LRARLYEEELKKREAETNAIEASKTEIGWG---HQIRSYVLQPYQLVKDLRTGVENTDPQ 292

Query: 330 YVLQGYIDDIINPLLTAHQAKM 351
            VL G +D  I   L     K 
Sbjct: 293 TVLNGNLDAFIEAALAQRVYKQ 314


>gi|163846312|ref|YP_001634356.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
 gi|222524073|ref|YP_002568544.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
 gi|163667601|gb|ABY33967.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
 gi|222447952|gb|ACM52218.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
          Length = 313

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 9/318 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +    +   ++  +  +++     +L  +      +S   DLA        +  +    
Sbjct: 1   MQRLTRLKEEVTAWNDLERRIASAAELIELAELEGDESLTADLAAEVQAIQREVAQ---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     DD+   L ++AG GG++A  +   L RMY R+A  R + V ++  S+ 
Sbjct: 57  -RELEILLSGPYDDRDAFLSVQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDMSEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-ID 214
           ++ G K     I G   +   + E+GVHR+ R+    A+    TS A V V+PE  +  +
Sbjct: 116 EEAGIKSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V+I  ED+RID  R+ G GGQ VNTTDSAVRITH+PTGI+V   +E+SQ QNR  AM+VL
Sbjct: 176 VEIKPEDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRELAMRVL 235

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVL 332
           RARL + E +R A ER+  R  +        ++RTY       + DHR +     ++ VL
Sbjct: 236 RARLLERELQRQAEERARLR-GEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVL 294

Query: 333 QGYIDDIINPLLTAHQAK 350
            G ID  I   L A+  +
Sbjct: 295 DGEIDPFIEAFLRANVRE 312


>gi|206895563|ref|YP_002247293.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738180|gb|ACI17258.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM
           5265]
          Length = 370

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 89/343 (25%), Positives = 156/343 (45%), Gaps = 11/343 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++ D K   +++     +        K      +   +   I ++   +   ++      
Sbjct: 25  KLDDKKAELSDVRKVYEKPDIWSDPDKAVAVARKVQRLEEEIERVEQIENLLKDLDAALE 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ +   +              ++           + L  +  D    IL + AG GG +
Sbjct: 85  LLQEGYDEELFEHALATLKELQQRI-----ELFRLVTLFTEPYDTNDAILMLHAGAGGVD 139

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+A    ++ E++  S  ++ G K     + G   +  ++ E GVHR
Sbjct: 140 AMDWTQMLMRMYLRWAERMGFETEIVDISRGEEAGVKSCTVFVRGSYAYGYLRAEKGVHR 199

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           + R+   +A  R HTS A V V+P+  +++V+I  +DI ++T R+ G+GGQH N T+S V
Sbjct: 200 LVRLSPFDADHRRHTSFALVDVVPDVEDVEVEINPDDIEVETFRSGGAGGQHQNKTESGV 259

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+ H PTGI VT + E+SQ QNR RAM++LRAR++    +         R   + S    
Sbjct: 260 RLIHKPTGITVTVTEERSQLQNRERAMRILRARVHQYHEEERKKSLEEIR-GDVKSASWG 318

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y F     + DHR   +   ++ V+ G I D +   L 
Sbjct: 319 NQIRSYVFHPYNMVKDHRTGYSRGDIDNVMDGDITDFMVKFLQ 361


>gi|28897286|ref|NP_796891.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839363|ref|ZP_01992030.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|308094351|ref|ZP_05888606.2| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034]
 gi|308095310|ref|ZP_05904925.2| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466]
 gi|308125643|ref|ZP_05776404.2| peptide chain release factor 2 [Vibrio parahaemolyticus K5030]
 gi|28805495|dbj|BAC58775.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747111|gb|EDM58099.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|308088411|gb|EFO38106.1| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466]
 gi|308093009|gb|EFO42704.1| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034]
 gi|308113324|gb|EFO50864.1| peptide chain release factor 2 [Vibrio parahaemolyticus K5030]
          Length = 260

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 98/260 (37%), Positives = 150/260 (57%), Gaps = 7/260 (2%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + E   ++ +  +     D   C ++++AG+GG+EA  +   + RMY R+A  + +K EV
Sbjct: 1   MEEKLAQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           +  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE
Sbjct: 61  IEVSEGEVAGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 210 AAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
             E   +DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ 
Sbjct: 121 IDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 268 RAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
           +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  +  
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVEN 237

Query: 326 YKLEYVLQGYIDDIINPLLT 345
              + VL G +D  I   L 
Sbjct: 238 RNTQAVLDGDLDKFIEASLK 257


>gi|302759769|ref|XP_002963307.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii]
 gi|300168575|gb|EFJ35178.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii]
          Length = 622

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 138/336 (41%), Positives = 205/336 (61%), Gaps = 12/336 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           ++ +  K++  +++R A +   + E     +  IK+ +E   +   +  I     K++E 
Sbjct: 43  ILRILEKRMSSIEDRHACLSKALLEPGIASEKLIKMNKELRNLDYSVDMIKALRAKEKEV 102

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  ++ +   D E+R LA  E+    +E+R+ ++++   L+PKD  D +  ILE    
Sbjct: 103 IGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEADSRGYILE---- 158

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
               E  +      R+         + V V    D  +   +E  A ISG GV+  +KFE
Sbjct: 159 ----ELEVTKRQFLRLISSRC-RHVFLVHVECLLDFYEC-SQEASAVISGDGVYGALKFE 212

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVHRVQRVP TE +GR+HTS A+VA+LPEA E+DV+I  ++I+IDT RA G+GGQHVNT
Sbjct: 213 SGVHRVQRVPVTEKAGRIHTSTASVAILPEANEVDVEIRNDEIKIDTYRAGGAGGQHVNT 272

Query: 240 TDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T SAVR+TH PTGI+V    E+SQH+N+ +A+ +L ARLY++ER R    RS  R+ QIG
Sbjct: 273 TCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSRAVASRSELRQDQIG 332

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           S DRSERIRTYNF QGR+TDHR+ +T + +E +++G
Sbjct: 333 SSDRSERIRTYNFPQGRVTDHRVGVTQHAIEQIMEG 368


>gi|254229664|ref|ZP_04923074.1| Protein chain release factor B [Vibrio sp. Ex25]
 gi|151937785|gb|EDN56633.1| Protein chain release factor B [Vibrio sp. Ex25]
          Length = 248

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 99/248 (39%), Positives = 146/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K EV+  S+ +  G K
Sbjct: 1   MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                ISG   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE  E  D+DI   
Sbjct: 61  SATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 280 VERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|94264473|ref|ZP_01288261.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
 gi|93455104|gb|EAT05328.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
          Length = 303

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 105/310 (33%), Positives = 160/310 (51%), Gaps = 13/310 (4%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
             ++      +   +E + L  +      D E        +  +E  + ELE E      
Sbjct: 2   QNLVDAFRAVEAAGEEAEILLELAI-AEEDRETEQEVAGHLKNLESRLAELELECM---- 56

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D  + IL I AG GG+EA  +V  L RMY R+A  + +  + L     D+ G K 
Sbjct: 57  FSGEHDANNAILTIHAGAGGTEAQDWVEILLRMYLRWAENKGFTTDTLDLLPGDEAGIKG 116

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLED 221
           +   + GR  +  ++ E G+HR+ R+   +  GR HTS A+V + PE   +I V++  +D
Sbjct: 117 VTVMVKGRWAYGYLRSEMGIHRLVRISPFDTGGRRHTSFASVFIFPELTDDIAVEVNDKD 176

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +RIDT RASG+GGQHVN T SA+RITH+PTGI+    +E+SQH+N+  AMK+L+A+LY+ 
Sbjct: 177 LRIDTFRASGAGGQHVNKTSSAIRITHLPTGIVAQCQNERSQHRNKDTAMKMLKAQLYER 236

Query: 281 E--RKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYID 337
           +  ++R   E     K +I  G    +IR+Y     R + DHR +     ++ VL G ID
Sbjct: 237 QQAQRREDQEHLHGDKKEIAWG---SQIRSYVLQPYRLVKDHRTDHETGNVDSVLDGNID 293

Query: 338 DIINPLLTAH 347
             I   L   
Sbjct: 294 PFIKSYLLWR 303


>gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 322

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 101/310 (32%), Positives = 165/310 (53%), Gaps = 13/310 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   ++  +  +   +   ++  DL  +      D+ ++D        + + + E   
Sbjct: 1   MRERTLLAGQVEGVQRLEADVRDTLDLVELAEMEGDDAVLKDAV-----QMLRALAEEAK 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D   C LE+ AG GG+EA  +   L RMY R+A    +KV ++ SS+ 
Sbjct: 56  RRETESLLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVALMESSEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           +  G K     ++G   +  +K E+GVHR+ R+   +A+ R  TS A+V V P     I+
Sbjct: 116 EQAGLKSATIQVTGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I   D+++DT RASG+GGQHVN T+SA+RITHIPTGI+V   +++SQH+NR  AM +L
Sbjct: 176 IEINEADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIIVACQTDRSQHRNRATAMTML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +AR+Y+ E +R   A  ++   K  IG G    +IR+Y  +  + + D R ++     + 
Sbjct: 236 KARMYEQELQRREAAAAQTEAAKTDIGWG---HQIRSYVLAPYQLVKDLRTSVERGNPDA 292

Query: 331 VLQGYIDDII 340
           VL G +DD +
Sbjct: 293 VLDGDLDDFM 302


>gi|162449904|ref|YP_001612271.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56']
 gi|161160486|emb|CAN91791.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56']
          Length = 350

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/334 (28%), Positives = 162/334 (48%), Gaps = 6/334 (1%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
             ++      S   +   K        + + SK+ +  +  +E +DL   +      +E 
Sbjct: 2   LQDLTQTTLSSGFWNDQEKAQAVLRKRAQVESKLEVAQRLGREIEDLAEYLEL--GAAEG 59

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            +    +  A    I     ++    +     D  + I+ I  G GG++A  +   L RM
Sbjct: 60  DEGVIADADAQADAIAGRLRKVELDRMLSGPADRGNAIVSIHPGAGGTDAKDWASMLLRM 119

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y R+   R +K E++   D D+ G   +  T+SG   +  ++ E+GVHR+ R+    A  
Sbjct: 120 YLRFCERRGYKTEIIDYQDGDEAGIDAVTLTVSGDAAYGYLRSEAGVHRLVRMSPFNADH 179

Query: 196 RVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG-I 253
              T+ A V V P++ +  ++ +  +DI I TMRA G GGQ+VN  ++AVR+ HIPTG  
Sbjct: 180 TRQTAFAAVEVTPDSDDEINIQVNEKDIEITTMRAGGKGGQNVNKVETAVRLRHIPTGLN 239

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +V  +E+SQHQNR  AMKVL+A+LY++E ++   E  A    +  S +   +IR Y  + 
Sbjct: 240 IVCRAERSQHQNRAMAMKVLKAKLYEMELQKREAEVQAYNAAK-SSINFGSQIRNYVLAP 298

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            R + D R +     ++ VL G ++  I   L A
Sbjct: 299 YRLVKDVRTSTEATDVDAVLDGDLEGFIEAYLLA 332


>gi|282859886|ref|ZP_06268974.1| peptide chain release factor 2-like protein [Prevotella bivia
           JCVIHMP010]
 gi|282587289|gb|EFB92506.1| peptide chain release factor 2-like protein [Prevotella bivia
           JCVIHMP010]
          Length = 374

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/373 (24%), Positives = 161/373 (43%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+ +R                F E +LR       +   +  E+   +  I 
Sbjct: 1   MITADQLKDILSRTDALYHYLGIEQKRIEFEEEQLRTQAPDFWEDPDRAREQMKKVKEIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  YD+ + + ++L      +  +    +        +   I +LE       + +  
Sbjct: 61  RWVKGYDKARAQAEELQLAFDFYKDELVTEEEVDAIYNKVVATIEDLEL----KNMLRQQ 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+++I +G GG+E+  +   L RMY R+     +KV +      D+ G K +   
Sbjct: 117 EDPMECVMKINSGAGGTESQDWADMLMRMYMRWGEAHGYKVTISDIQVGDEAGIKSVTMK 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
             G    F  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 FEGGEYAFGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM++L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKS 296

Query: 276 RLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+    ++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRMEAQAKVEAAKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDSVMN 353

Query: 334 GYIDDIINPLLTA 346
           G +D  I   L  
Sbjct: 354 GKLDGFIKAYLME 366


>gi|72024372|ref|XP_797931.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115937037|ref|XP_001184225.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 422

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 133/364 (36%), Positives = 205/364 (56%), Gaps = 15/364 (4%)

Query: 4   LSHKQICDLKNRFAEIEL---RMSESPSVDAYIKLTEEYA----AISPIISKISIYDQKK 56
           +S  +  +L+    E+      +     +       +E       +  ++ K       +
Sbjct: 47  MSDSKQKELRESLMELGAVQWLLLRGDPMSDSK--QKELRGSLMELGAVLDKWEELTSAE 104

Query: 57  QEEQDLHTVIGDHNS---DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           +E  +L  +I + +    D E+++LA  E   ++  I ++  E+  LLLP +  DD   I
Sbjct: 105 EEITELQRLIEEPSDTSQDKEMQELAAAEKDDLDAMIADISEELVDLLLPSEETDDNDVI 164

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           +E  AG GG EA LF  D+F MY+RYAA R W   VL     D GG +    ++SG   +
Sbjct: 165 MEFTAGVGGQEAMLFAADMFEMYQRYAAYRGWTFSVLEYFTTDMGGLRHASVSMSGDQAY 224

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
             ++ E+GVHRVQRVP TE+ GR+HTS   +AVLP+  EID+ +  +D+R++T +ASG+G
Sbjct: 225 LLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLPQPKEIDLKLDPKDLRVETKKASGAG 284

Query: 234 GQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQHVNTTDSAVRITH+PTGI   +  E+SQH+NR  AM +L+ R+Y+       +   + 
Sbjct: 285 GQHVNTTDSAVRITHLPTGISAESQQERSQHKNRSIAMTMLQTRIYNRILADQTSSERSM 344

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAK 350
           R  Q+G+G RSE+IRTYN+ Q RITDHR   T++ +   L G   +D+++   +   Q +
Sbjct: 345 RSSQVGTGGRSEKIRTYNYQQDRITDHRRGRTVHGVPEYLLGSELLDEMVTSCVEGDQCQ 404

Query: 351 MIGS 354
            +  
Sbjct: 405 QVRE 408


>gi|254500720|ref|ZP_05112871.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
 gi|222436791|gb|EEE43470.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
          Length = 322

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 110/317 (34%), Positives = 165/317 (52%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +   +Q+  +  +L  + G+   D  + + A+  +  ++ ++ +L  
Sbjct: 1   MRERQQLDDGINGVKGLEQELADNIELIEL-GEMEDDKSVVEDAEEALRGLKDKVNQL-- 57

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LEI +G GG+E+  +   L RMY R+A  R +KVE+L   D 
Sbjct: 58  --QLDSLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   +++ R HTS ++  V P     I+
Sbjct: 116 EEAGIKSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +D+   D RIDT RASG+GGQHVNTTDSAVRITH PTGI+V   SE+SQH+NR  A  +L
Sbjct: 176 IDVNESDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           +ARLY+ E K+   A    A  K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 KARLYEAELKKREEAANAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGVQSTSPDD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGSLDSFMEAALAQR 309


>gi|315607246|ref|ZP_07882247.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574]
 gi|315251063|gb|EFU31051.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574]
          Length = 373

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 156/352 (44%), Gaps = 20/352 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I   K  F E +LR       +   +  E+   +  I   +  Y + +Q   +L     
Sbjct: 22  DIDKKKVEFEEEQLRTQAPDFWEDPARAQEQMKKVKSIEKWLDGYKEVRQYADELQLAFD 81

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D    +    +     K I  LE       + +  +D    +++I +G GG+E+  
Sbjct: 82  FFHDDMVSEEEVDADYAKAIKAIEALEL----KNMLRQKEDPMEAVIKINSGAGGTESQD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-RGVFSRMKFESGVHRVQ 186
           +   L RMY R+     ++  V +  + D+ G K +   + G    +  +K E+GVHR+ 
Sbjct: 138 WASMLMRMYMRWCEAHGYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKSENGVHRLV 197

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           RV    A G+  TS A+V V P     I+V +    +  DT R+ G+GGQ+VN  +S VR
Sbjct: 198 RVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNVNKVESGVR 257

Query: 246 ITH---------IPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--K 294
           + +             ++  +  + Q +NR +AM +L+++LYD   K+    ++     K
Sbjct: 258 LRYWYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEAQAKIEAGK 317

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +I  G    +IR+Y F   R+ DHR N     ++ V+ G ID+ I   L  
Sbjct: 318 KKIEWG---SQIRSYVFDDRRVKDHRTNYQTADVDGVMDGKIDEFIKAYLME 366


>gi|283778052|ref|YP_003368807.1| peptide chain release factor 2 [Pirellula staleyi DSM 6068]
 gi|283436505|gb|ADB14947.1| bacterial peptide chain release factor 2 (bRF- 2) [Pirellula
           staleyi DSM 6068]
          Length = 398

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 165/343 (48%), Gaps = 12/343 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K +F  +E RMS+    +   K  E  + +  + + ++  D       DL  ++   
Sbjct: 48  DGKKKQFEFLEARMSQPDFWNVQEKALEVVSQVKSLKAILAPLDAIVNSASDLPGMLDMA 107

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D       + E+  IEK++ +LE       L     D+   I+ I A  GG++A+ + 
Sbjct: 108 GDDESFAADLRAEIERIEKQLDDLEL----KALLNGPLDNVGAIVTIHARDGGTDASDWA 163

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L RMY  +A    ++ +V    + D  G       I G   +  +K ESG HR+ R+ 
Sbjct: 164 EMLLRMYIGWAQKNGYEYKVTERDEADVAGISAATLVIRGPMAYGYLKGESGHHRLVRIS 223

Query: 190 ATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
              + G+  TS A V VLPE   + +V I  EDIR DT RA G+GGQHVN T+SAVR+TH
Sbjct: 224 PFNSEGKRQTSFAAVDVLPEIADDFEVVINKEDIREDTYRAGGAGGQHVNKTESAVRLTH 283

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSER 305
            P+GI+V   +E+SQH NR  A K+LRARL   E +R   E ++  K   ++G G    +
Sbjct: 284 FPSGIVVQCQNERSQHSNRATAYKMLRARLARAEEERREAESASKYKSAAKVGFG---SQ 340

Query: 306 IRTYNFSQ-GRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR Y      R+ D R   +      VL G +   I+ +L   
Sbjct: 341 IRNYFLHPTQRVKDSRTGYSEGDFHSVLDGNLQGFIDSVLKWR 383


>gi|209885116|ref|YP_002288973.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
 gi|209873312|gb|ACI93108.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
          Length = 322

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 169/316 (53%), Gaps = 13/316 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   +  I   +++ +++  L  + G+  +D+ +   A+  + A++K++   E 
Sbjct: 1   MQERTSLENQLGGIGRTERELEDQIGLIEL-GEAENDAAVVAEAEAALAALKKDVARQEL 59

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  + +KVE L  +  
Sbjct: 60  ----EALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEFLEETQG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS +++A+ P       
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDINESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+           K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEQAAADQAAKTDIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTSG 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D+ +   L  
Sbjct: 293 VLDGDLDEFMAATLAQ 308


>gi|282158488|gb|ADA77879.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 248

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 99/248 (39%), Positives = 147/248 (59%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I++G+GG+EA  +   L RMY R+A    +KV V   SD D  G K
Sbjct: 1   MFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                I G   +  ++ E+G+HR+ R    +++ + HTS A+V + PE   +ID++I   
Sbjct: 61  GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPT 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V + S++SQH+NR  AMK L+++LY+
Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E++   + K  IG G    +IR+Y   Q RI D R  +     + VL G +D
Sbjct: 181 MELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQSRIKDLRTGVENTNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|154506039|ref|ZP_02042777.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149]
 gi|153793538|gb|EDN75958.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149]
          Length = 314

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 102/308 (33%), Positives = 166/308 (53%), Gaps = 6/308 (1%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +  +   +   +Q   + +DL  +I     + +   + +IE   +  E    E  I  L 
Sbjct: 4   LKSLQDSVKQIEQMYADYEDLGLLIEMSQEEQDEETVQEIEEELLRFEGEFEELRIQTL- 62

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
                 D    I+ + AG GG+E+  +   L+RMY R+A  + + VEVL   + D  G K
Sbjct: 63  -LTGEYDRDHAIVTLHAGAGGTESCDWANMLYRMYTRWAEKKGFSVEVLDYLEGDVAGIK 121

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLE 220
            +   + G   +  ++ E GVHR+ R+    A+G+  TS A+  V      +ID++I  +
Sbjct: 122 GVTFEVRGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEEDIDIEINDD 181

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           DIRIDT R+SG+GGQH+N T SA+RITH PTGI+V   +E+SQH N+ +AM++L+A+LY 
Sbjct: 182 DIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYL 241

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDD 338
           ++++  A++ S  R  +I       +IR+Y       + DHR N+ +  +  VL G +D 
Sbjct: 242 MKQQEQADKVSGIR-GEIKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVLDGNLDP 300

Query: 339 IINPLLTA 346
            IN  L+A
Sbjct: 301 FINAYLSA 308


>gi|261250316|ref|ZP_05942892.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891]
 gi|260939432|gb|EEX95418.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891]
          Length = 263

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 96/252 (38%), Positives = 147/252 (58%), Gaps = 7/252 (2%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
            +  +     D   C +++++G+GG+EA  +   + RMY R+A  + +K EV+  S+ + 
Sbjct: 12  EFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEV 71

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVD 216
            G K     ISG   +  ++ E+GVHR+ R    ++SGR HTS A+  + PE  +   +D
Sbjct: 72  AGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQID 131

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           I   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ +AMK LRA
Sbjct: 132 INPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRA 191

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  +     + VL 
Sbjct: 192 KLFELEIQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLD 248

Query: 334 GYIDDIINPLLT 345
           G +D  I   L 
Sbjct: 249 GDLDKFIEASLK 260


>gi|301384023|ref|ZP_07232441.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058729|ref|ZP_07250270.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato K40]
 gi|331016328|gb|EGH96384.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 304

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 103/309 (33%), Positives = 158/309 (51%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++ I+  +        + +DL  +  +    + + D+A           +     + +  
Sbjct: 2   LAQIVETLDEMSSGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEK-----LEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S  +  G K
Sbjct: 57  MFSGEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  ++DI   
Sbjct: 117 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPS 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRARLY+
Sbjct: 177 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 236

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++     +   + K  IG G    +IR+Y     RI D R N+     + VL G ID
Sbjct: 237 QEVQKRNAASQALEDTKSDIGWG---HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDID 293

Query: 338 DIINPLLTA 346
           + +   L  
Sbjct: 294 EYLIASLKQ 302


>gi|327329965|gb|EGE71719.1| peptide chain release factor 2 [Propionibacterium acnes HL097PA1]
          Length = 370

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 162/326 (49%), Gaps = 11/326 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  EAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  N-SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E    A  E + + +EI  LE       L     D++  ++ IR+  GG +AA F
Sbjct: 90  AADDKESLAEATTETVKLREEIDALEV----RTLLSGQYDEREAVVTIRSEAGGVDAADF 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+
Sbjct: 146 AEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKAATFVVHAPFAYGTLSVEQGTHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+T
Sbjct: 206 SPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLT 265

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++
Sbjct: 266 HLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QM 322

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYV 331
           R+Y     + + D R N  +   + V
Sbjct: 323 RSYVLHPYQMVKDLRTNHEVGNTDAV 348


>gi|157133587|ref|XP_001656262.1| mitochondrial peptide chain release factor [Aedes aegypti]
 gi|108870765|gb|EAT34990.1| mitochondrial peptide chain release factor [Aedes aegypti]
          Length = 422

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 192/351 (54%), Gaps = 11/351 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            K + ++  R     L++S+           +  A +S ++               L  +
Sbjct: 68  QKYLENI--RLEYYALKVSDQLDKKDI----KRMALLSHVVEMYEQRRIIMDNLNSLQEM 121

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             + + D       + E         + E     L +  D +D  + ILE+ AG GG EA
Sbjct: 122 STEKDEDMLQLMREEKEAYTNILRKLDGEIMNGILSM-DDEEDYNTLILEVAAGVGGQEA 180

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            LF  +LF MY  +   + W+ EV+ + D + GG +     + GR  +  +KFE+GVHRV
Sbjct: 181 MLFSRELFDMYCGFIDYKGWETEVIETEDTELGGIRHASIVVHGRDAYRYLKFEAGVHRV 240

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE S R+HTS ATV+V+P   E ++++  +D++I+T RASG+GGQHVNTTDSAVR
Sbjct: 241 QRVPTTEKSARIHTSTATVSVIPRPDEFEIELKDKDLKIETKRASGAGGQHVNTTDSAVR 300

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTG+ V   +E+SQ +N+  A + L A+L   E +   N   + +K Q+GS  R+E
Sbjct: 301 IVHLPTGMAVECQTERSQVKNKEIAKQKLLAKLTQQELESKFNATQSMKKSQVGSSLRNE 360

Query: 305 RIRTYNFSQGRITDHRI-NLTLYKLEYVLQG--YIDDIINPLLTAHQAKMI 352
           +IRTYN++Q RITDHR+   T + L+  L+G   ++D+I  L   H+ K +
Sbjct: 361 KIRTYNYNQDRITDHRVDGGTTHNLKAFLEGGPQLEDMIAKLQAMHRKKQL 411


>gi|313816439|gb|EFS54153.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA1]
 gi|313827262|gb|EFS64976.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA2]
 gi|314917824|gb|EFS81655.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA1]
 gi|314919714|gb|EFS83545.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA3]
 gi|314930043|gb|EFS93874.1| peptide chain release factor 2 [Propionibacterium acnes HL067PA1]
 gi|314956378|gb|EFT00690.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA1]
 gi|314957250|gb|EFT01353.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA1]
 gi|314967699|gb|EFT11798.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA1]
 gi|315098170|gb|EFT70146.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA2]
 gi|315101677|gb|EFT73653.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA1]
 gi|315109496|gb|EFT81472.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA2]
 gi|327452380|gb|EGE99034.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA3]
 gi|327452743|gb|EGE99397.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA2]
 gi|328753837|gb|EGF67453.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA1]
          Length = 370

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 162/326 (49%), Gaps = 11/326 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  EAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  N-SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E    A  E + + +EI  LE       L     D++  ++ IR+  GG +AA F
Sbjct: 90  AADDKESLAEATTETVKLREEIDALEV----RTLLSGQYDEREAVVTIRSEAGGVDAADF 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+
Sbjct: 146 AEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+T
Sbjct: 206 SPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLT 265

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++
Sbjct: 266 HLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QM 322

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYV 331
           R+Y     + + D R N  +   + V
Sbjct: 323 RSYVLHPYQMVKDLRTNHEVGNTDAV 348


>gi|219682342|ref|YP_002468726.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622075|gb|ACL30231.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 178/342 (52%), Gaps = 15/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K+R  EI+L +S   +        KL +E   ++ II  I+  ++  +E      + 
Sbjct: 12  NKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKEVVIFLELA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +   ++          ++I +   ++ +  +    DD   C ++I++G+GG++A 
Sbjct: 72  IETQDNLVFKESL-----LEIQKIEQEIKKLEFYRMFSKKDDHYDCYIDIQSGSGGTDAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +  E++  S  +  G K     +SG   F   + E+G+HR+ 
Sbjct: 127 DWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIHRLI 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS +++ + P+  E  D++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 187 RKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTESAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+    + +SQH+N+ +AMK ++++LY+++ ++   E+      K  I  G+ 
Sbjct: 247 ITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITWGN- 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
             +IR+Y     +I D R  +    ++ VL G +DD I   L
Sbjct: 306 --QIRSYILDNSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSL 345


>gi|311087834|gb|ADP67913.1| peptide chain release factor 2 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 178/342 (52%), Gaps = 15/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K+R  EI+L +S   +        KL +E   ++ II  I+  ++  +E      + 
Sbjct: 12  NKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKEVVIFLELA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +   ++          ++I +   ++ +  +    +D   C ++I++G+GG++A 
Sbjct: 72  IETQDNLVFKESL-----LEIQKIEQEIKKLEFYRMFSKKNDYYDCYIDIQSGSGGTDAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +  E++  S  +  G K     +SG   F   + E+G+HR+ 
Sbjct: 127 DWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIHRLI 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS +++ + P+  E  D++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 187 RKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTESAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+    + +SQH+N+ +AMK ++++LY+++ ++   E+      K  I  G+ 
Sbjct: 247 ITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITWGN- 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
             +IR+Y     +I D R  +    ++ VL G +DD I   L
Sbjct: 306 --QIRSYILDNSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSL 345


>gi|282880596|ref|ZP_06289302.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS
           5C-B1]
 gi|281305491|gb|EFA97545.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS
           5C-B1]
          Length = 374

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 20/351 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   K  F E +LR       +   +  E+   +  I   +  Y+Q +Q   +L      
Sbjct: 23  IDQKKIEFEEEQLRTQAPDFWEDPQRAQEQMIKVKGIEKWLKGYEQVRQMADELQLAYEF 82

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           +  D    +    +       I +LE       + +  +D   C+++I +G GG+E+  +
Sbjct: 83  YRDDMVTEEELDHDYAKAIAAIEDLEL----KNMLRQKEDPMDCVMKINSGAGGTESQDW 138

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS-GRGVFSRMKFESGVHRVQR 187
              L RMY R+A    +K  V    D ++ G K +   I      +  +K E+GVHR+ R
Sbjct: 139 AQMLMRMYMRWAEAHDYKCTVSDIQDGEEAGIKSVTMKIEGNEYAYGFLKSENGVHRLVR 198

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR-IDTMRASGSGGQHVNTTDSAVRI 246
           V    A G+  TS A+V V P   +             DT R+SG+GGQ+VN  +S VR+
Sbjct: 199 VSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPACVSWDTFRSSGAGGQNVNKVESGVRL 258

Query: 247 THIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KL 295
            +             ++  +  + Q +NR +AM++L+++LYD   K+    ++     K 
Sbjct: 259 RYQYHDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEAQAKIEAGKK 318

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +I  G    +IR+Y F   R+ DHR N     ++ V+ G IDD I   L  
Sbjct: 319 KIEWG---SQIRSYVFDDRRVKDHRTNFQTTDVDGVMDGKIDDFIKAYLME 366


>gi|15617035|ref|NP_240248.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681787|ref|YP_002468173.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471489|ref|ZP_05635488.1| peptide chain release factor 2 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|25299669|pir||F84980 peptide chain release factor 2 [imported] - Buchnera sp.  (strain
           APS)
 gi|10039100|dbj|BAB13134.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624630|gb|ACL30785.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311087327|gb|ADP67407.1| peptide chain release factor 2 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 178/342 (52%), Gaps = 15/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K+R  EI+L +S   +        KL +E   ++ II  I+  ++  +E      + 
Sbjct: 12  NKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKEVVIFLELA 71

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +   ++          ++I +   ++ +  +    +D   C ++I++G+GG++A 
Sbjct: 72  IETQDNLVFKESL-----LEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQSGSGGTDAQ 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +  E++  S  +  G K     +SG   F   + E+G+HR+ 
Sbjct: 127 DWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIHRLI 186

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS +++ + P+  E  D++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 187 RKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTESAVR 246

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+    + +SQH+N+ +AMK ++++LY+++ ++   E+      K  I  G+ 
Sbjct: 247 ITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITWGN- 305

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
             +IR+Y     +I D R  +    ++ VL G +DD I   L
Sbjct: 306 --QIRSYILDNSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSL 345


>gi|329120961|ref|ZP_08249592.1| peptide chain release factor RF2 [Dialister micraerophilus DSM
           19965]
 gi|327471123|gb|EGF16577.1| peptide chain release factor RF2 [Dialister micraerophilus DSM
           19965]
          Length = 328

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 95/326 (29%), Positives = 166/326 (50%), Gaps = 6/326 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           MS+    D   K        +        Y +  +  + L  ++     + +     + +
Sbjct: 1   MSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDD--QGMEGD 58

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +    +E+  + N+    LL  +  D  + I+   AG GG+EA  +   L RMY ++A  
Sbjct: 59  LKQEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAES 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             + +E L+    D+ G K     I G   +  +K E GVHR+ R+   +A+ R HTS +
Sbjct: 119 EGYGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFS 178

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEK 260
            V V+PE + +I+VD+ + D+R+D  RASG+GGQHVN T SAVR+TH+PTGI+    +E+
Sbjct: 179 AVDVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQ QN+ + +++LRA+L+++E K+    +   +  Q    +   +IR+Y F     + D+
Sbjct: 239 SQTQNKEQCLRILRAKLFELEMKKHEQLKRNIQGEQQA-IEWGSQIRSYVFQPYTLVKDN 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLT 345
           R  +    ++ V+ G ++  I   L 
Sbjct: 298 RTGVETGNVQAVMDGDLNPFIEGFLK 323


>gi|269959607|ref|ZP_06173988.1| peptide chain release factor 2 [Vibrio harveyi 1DA3]
 gi|269835665|gb|EEZ89743.1| peptide chain release factor 2 [Vibrio harveyi 1DA3]
          Length = 260

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 97/260 (37%), Positives = 150/260 (57%), Gaps = 7/260 (2%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + +   ++ +  +     D   C ++++AG+GG+EA  +   + RMY R+A  + +K EV
Sbjct: 1   MEQKLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           +  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE
Sbjct: 61  IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 210 AAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
             E   +DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ 
Sbjct: 121 IDENIAIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 268 RAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
           +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  +  
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVEN 237

Query: 326 YKLEYVLQGYIDDIINPLLT 345
              + VL G +D  I   L 
Sbjct: 238 RNTQAVLDGDLDKFIEASLK 257


>gi|225175296|ref|ZP_03729291.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
 gi|225169048|gb|EEG77847.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
          Length = 288

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 114/287 (39%), Positives = 164/287 (57%), Gaps = 13/287 (4%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D E+   A+     +  E+ +LE      +L +   D  + I+ I  G GG+E+
Sbjct: 3   LAEDEGDKELWVDAEQVAAELAAEMDKLEL----AVLFRGRYDANNAIIAIHPGAGGTES 58

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R ++VEVL     D+ G K     I GR  +  +K E GVHR+
Sbjct: 59  QDWANMLLRMYTRWAERRNYQVEVLDLLPGDEAGIKSATLLIKGRNAYGFLKAERGVHRL 118

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDV--DIPLEDIRIDTMRASGSGGQHVNTTDSA 243
            R+   +A+ R HTS A++ VLPE  E D   +I  +D++IDT RASG+GGQHVNTTDSA
Sbjct: 119 VRISPFDAASRRHTSFASLDVLPEVEEGDSGIEISPDDLKIDTYRASGAGGQHVNTTDSA 178

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VRITHIPTG +V   +E+SQH NR RAMK+L+ARL D+ +++ A E S  R  Q  I  G
Sbjct: 179 VRITHIPTGTVVQCQNERSQHSNRDRAMKILKARLADLYQRQQAEELSNLRGEQKEIAWG 238

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR+Y F     + DHR  + +  +  V+ G +D++I   L  
Sbjct: 239 ---SQIRSYVFQPYTMVKDHRTGVEVGNINAVMDGDLDELIESYLRQ 282


>gi|114326944|ref|YP_744101.1| peptide chain release factor 2 [Granulibacter bethesdensis CGDNIH1]
 gi|114315118|gb|ABI61178.1| bacterial peptide chain release factor 2 (RF-2) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 323

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 97/311 (31%), Positives = 164/311 (52%), Gaps = 13/311 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E   ++  +  +   + +  +  +L  +  + + D  +   A+  +  I  E + LE
Sbjct: 1   MMRERTRLASQVEGVLRMESEVSDATELAEMA-EADGDEAMATDARRMLETIAAEAKRLE 59

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                  L     D     LEI +G GG+EA  +   L RMY R+A    +KV ++  SD
Sbjct: 60  I----ESLLSGEADGNDAYLEINSGAGGTEAQDWAEMLLRMYTRWAEAHGYKVTLIEQSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            +  G K     ++G   +  +K E+GVHR+ R+   +++ R  TS A++ V P     I
Sbjct: 116 GEQAGIKSATLQVAGPSAYGWLKTEAGVHRLVRISPFDSAARRQTSFASIWVYPVVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +++I   D+++DT RASG+GGQHVN T+SA+RITH+P+GI+V   +++SQH+NR  AM +
Sbjct: 176 EIEINEADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQTDRSQHRNRATAMNM 235

Query: 273 LRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           L+ARLY+ E ++           K +IG G    +IR+Y  +  + + D R N+      
Sbjct: 236 LKARLYEAELQKREAAAQEQENAKSEIGWG---HQIRSYVLAPYQLVKDLRTNVEKGNPG 292

Query: 330 YVLQGYIDDII 340
            VL G +D+ +
Sbjct: 293 AVLDGDLDEFM 303


>gi|288927134|ref|ZP_06421019.1| peptide chain release factor 2, programmed [Prevotella buccae D17]
 gi|288336096|gb|EFC74492.1| peptide chain release factor 2, programmed [Prevotella buccae D17]
          Length = 373

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 156/352 (44%), Gaps = 20/352 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I   K  F E +LR       +   +  E+   +  I   +  Y + +Q   +L     
Sbjct: 22  DIDKKKVEFEEEQLRTQAPDFWEDPTRAQEQMKKVKSIEKWLDGYKEVRQYADELQLAFD 81

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D    +    +     K I  LE       + +  +D    +++I +G GG+E+  
Sbjct: 82  FFHDDMVSEEEVDADYAKAIKAIEALEL----KNMLRQKEDPMEAVIKINSGAGGTESQD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-RGVFSRMKFESGVHRVQ 186
           +   L RMY R+     ++  V +  + D+ G K +   + G    +  +K E+GVHR+ 
Sbjct: 138 WASMLMRMYMRWCEAHGYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKSENGVHRLV 197

Query: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           RV    A G+  TS A+V V P     I+V +    +  DT R+ G+GGQ+VN  +S VR
Sbjct: 198 RVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNVNKVESGVR 257

Query: 246 ITH---------IPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--K 294
           + +             ++  +  + Q +NR +AM +L+++LYD   K+    ++     K
Sbjct: 258 LRYWYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEAQAKIEAGK 317

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +I  G    +IR+Y F   R+ DHR N     ++ V+ G ID+ I   L  
Sbjct: 318 KKIEWG---SQIRSYVFDDRRVKDHRTNYQTADVDGVMDGKIDEFIKAYLME 366


>gi|119952877|ref|YP_945086.1| peptide chain release factor 2 [Borrelia turicatae 91E135]
 gi|119861648|gb|AAX17416.1| bacterial peptide chain release factor 2 [Borrelia turicatae
           91E135]
          Length = 353

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 14/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             +K +  E E ++++    +   K  E     + + +KI  ++    + +DL  +    
Sbjct: 17  NKIKVKLKEYEKQINDENFWNDNKKAQEILKNQNILKAKIEPWEDLICKLKDLRELCEIA 76

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S+ +   L Q      E+    L      L   K+  D  +  L I +G GG+EA  +V
Sbjct: 77  ESEEDTALLDQDINKLREQYKHLL-----TLSYFKEDIDINNAFLTIHSGAGGTEACDWV 131

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+R+Y RY+    +K E++   + + GG K +   I G   +  +K E G+HR+ R+ 
Sbjct: 132 SMLYRIYLRYSERHGYKTELIDLLEAE-GGIKSVTIEIKGEYAYGFLKSEVGIHRLVRIS 190

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V +      +I++ I  EDIR+DT RASG+GGQHVN T SAVRITH
Sbjct: 191 PFDAAKKRHTSFASVFIDPVIDDKIEITIKPEDIRVDTYRASGAGGQHVNKTSSAVRITH 250

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDRSER 305
           + TGI+  + +++SQH+N+  AM+VL+++LY+  +  ++  ++     K  I  G+   +
Sbjct: 251 LQTGIVTQSQTDRSQHRNKDLAMRVLKSKLYEHYKILEQQKSKSKQEEKKDISWGN---Q 307

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           IR+Y F     + DHR       +  V+ G ID+ I   L    
Sbjct: 308 IRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWKN 351


>gi|123967735|ref|YP_001008593.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           AS9601]
 gi|123197845|gb|ABM69486.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
           AS9601]
          Length = 354

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 96/339 (28%), Positives = 176/339 (51%), Gaps = 6/339 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           LK +  E+E   ++    D   +  ++   +  + +++ + D+ K    D +  +  ++ 
Sbjct: 11  LKAKRKELEQISAQPEFWDNQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSL 70

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + E  +   +E     K++RE  ++  +  L     D +  ++ I AG GG++A  +V  
Sbjct: 71  EPE--EEMILESQLGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEI 128

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A   +  + +   S  ++ G K +   I G+  +  ++ E G HR+ R+   
Sbjct: 129 LLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIEGKYAYGYLQHEKGTHRLVRISPF 188

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+G+  TS A V V+P+    I +DIP +D+ I T R+ G+GGQ+VN  ++AVRI H+P
Sbjct: 189 NANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLP 248

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           +GI V  + E+SQ QN+ +AM +L+++L  + +++ A E +   K  I       +IR Y
Sbjct: 249 SGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNY 307

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            F   + + D R      +L+ VL G +D  I+ LL  +
Sbjct: 308 VFHPYQMVKDLRTMQETNELDSVLDGGLDPFIHELLRMN 346


>gi|115524982|ref|YP_781893.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisA53]
 gi|115518929|gb|ABJ06913.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisA53]
          Length = 322

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   +  I   +++  +   +  +      DS + +         +   R    
Sbjct: 1   MQERTSLEDSLDGIGKVERELDDNVGMIELGEAEGDDSVVAEAEAALKKLKKDVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A    +K+E L  ++ 
Sbjct: 57  -RELEALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS ++V + P       
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSVQIFPVVDNSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+TH+PTG+ +V  + +SQH+N+ +A  +L
Sbjct: 176 IDIAESDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNKAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+           K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEQAAADQAAKTDIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTAG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMAATLAQR 309


>gi|167011047|ref|ZP_02275978.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC200]
          Length = 248

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 99/248 (39%), Positives = 146/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D     L+I++G+GG+EA  +   L RMY R+A    +KV V   SD D  G K
Sbjct: 1   MFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                I G   +  ++ E+G+HR+ R    +++ + HTS A+V + PE   +ID++I   
Sbjct: 61  GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V + S++SQH+NR  AMK L+++LY+
Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E++   + K  IG G    +IR+Y   Q RI D R  +     + VL G +D
Sbjct: 181 MELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQSRIKDLRTGVENTNTQAVLDGDLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|297623932|ref|YP_003705366.1| hypothetical protein Trad_1705 [Truepera radiovictrix DSM 17093]
 gi|297165112|gb|ADI14823.1| conserved hypothetical protein [Truepera radiovictrix DSM 17093]
          Length = 377

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 19/354 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   + R AE+E ++S+    D       LT+E A +  ++      +   +  ++L  
Sbjct: 27  DLARKEARLAELEPQLSDPKLWDDPEAARTLTQEAARLRRVLETFHRLEGDLEGLRELQE 86

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +        ++          ++   R          L     DD++ IL I+ G GG+E
Sbjct: 87  LATTPEEQQDLEAERAALQRTLDALYR--------ETLFSGPHDDRAAILTIKPGAGGTE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG--GYKEIVATISGRGVFSRMKFESGV 182
           ++ + G L+RMY R+A  + ++VE+L ++ +D    G       I G   +  ++ ESGV
Sbjct: 139 SSDWAGMLWRMYRRFAERQGFEVELLDATPSDAAPNGIDYAQLIIRGERAYGLLQVESGV 198

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ RV   +A GR HTS A+V V+PE  +  ++ I  +D+R+D  R+SG GGQ VNTTD
Sbjct: 199 HRLVRVSPFDAQGRRHTSFASVEVMPEIDDAVEITIDPKDVRVDVYRSSGPGGQSVNTTD 258

Query: 242 SAVRITHIPTG----IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           SAVR+ +        ++     KSQ +NR +AM VLR+RL++ E +R   E+   R  Q 
Sbjct: 259 SAVRVVYKGGTPEEIVVTCQDGKSQIKNREKAMTVLRSRLFEREERRRLEEQMRARGEQK 318

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
              +   +IR+Y   +  + DHR     +  + VL G I+ +I   L       
Sbjct: 319 A-IEWGSQIRSYVLDKRYVKDHRTGEMRHDPDDVLDGDIEGLIWSGLEHRARTQ 371


>gi|88860263|ref|ZP_01134901.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata
           D2]
 gi|88817461|gb|EAR27278.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata
           D2]
          Length = 260

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 94/252 (37%), Positives = 144/252 (57%), Gaps = 7/252 (2%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
            +  +     D     L++++G+GG+EA  +   L RMY R+A  + +K E++ ++D D 
Sbjct: 9   EFRRMFSGDFDQNDAYLDLQSGSGGTEAQDWCNILLRMYLRWADAKGFKAELVEATDGDV 68

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVD 216
            G K     I G   +  ++ E+GVHR+ R    ++ GR HTS A+  V PE  +   +D
Sbjct: 69  AGIKGATVRIVGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIKID 128

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           I   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +E+SQH+N+ +AMK L+A
Sbjct: 129 INPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNERSQHKNKDQAMKQLKA 188

Query: 276 RLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +L+++E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL 
Sbjct: 189 KLFELELQKQNAEKQTQEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGIENRNTQAVLD 245

Query: 334 GYIDDIINPLLT 345
           G +D  I   L 
Sbjct: 246 GDLDKFIEASLK 257


>gi|299529204|ref|ZP_07042649.1| peptide chain release factor 2 [Comamonas testosteroni S44]
 gi|298722827|gb|EFI63739.1| peptide chain release factor 2 [Comamonas testosteroni S44]
          Length = 248

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 93/249 (37%), Positives = 138/249 (55%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +C ++I+AG GG+EA  +   L R Y +YA  + +K  V   +  D  G K
Sbjct: 1   MFGGEADPLNCFIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                + G   +  ++ E+GVHR+ R    ++SG  HTS +++ V PE  +  +++I   
Sbjct: 61  SATIKVEGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R DT RASG+GGQH+N TDSAVR+THIPTGI+V     +SQH NR  A + LR+RLYD
Sbjct: 121 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYD 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  +G G    +IR+Y     RI D R N+ +   + VL G +D
Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWG---HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L  
Sbjct: 238 VFIEASLKQ 246


>gi|189459974|ref|ZP_03008759.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136]
 gi|189433347|gb|EDV02332.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136]
          Length = 371

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 158/372 (42%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEI--------------ELRM--SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +              E ++        D   K   +   +  + 
Sbjct: 1   MITIEQLKDVKTRTEALYRYLDIENKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKSLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I  Y+  K    +L      +  +    +          + + ELE +          
Sbjct: 61  GWIEGYNAVKTLTDELELAFDFYKDELVTEEEVDEAYAKSLQALEELELKNMLRSEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY R+A    +K+ V +  + D+ G K +   
Sbjct: 121 D----CVLKINSGAGGTESQDWSSMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMN 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +    +  D
Sbjct: 177 IEGAYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVVVEPARLSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +N+  AM+ LR+ 
Sbjct: 237 TFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMEEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|282878031|ref|ZP_06286839.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC
           35310]
 gi|281299866|gb|EFA92227.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC
           35310]
          Length = 374

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 95/351 (27%), Positives = 159/351 (45%), Gaps = 20/351 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   K  F E +LR       +   +  E+   +  I   +  Y Q +Q   +L      
Sbjct: 23  IDQKKVEFEEEQLRTQAPDFWEDPKRAQEQMIKVKGIEKWLVGYQQVRQLADELELAFDF 82

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           +  +    D    +       I  LE       + + T+D   C+++I +G GG+E+  +
Sbjct: 83  YRDEMITEDELDADYAKAVAAIEHLE----MKNMLRQTEDPMDCVMKINSGAGGTESQDW 138

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-RGVFSRMKFESGVHRVQR 187
              L RMY R+A    +K  +    D D+ G K +   I G    +  +K E+GVHR+ R
Sbjct: 139 AQMLMRMYMRWAEAHDYKCTISDIQDGDEAGIKSVTMKIEGGEYAYGYLKSENGVHRLVR 198

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           V    A G+  TS A+V V P     I+V +    +  DT R+SG+GGQ+VN  +S VR+
Sbjct: 199 VSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARVSWDTFRSSGAGGQNVNKVESGVRL 258

Query: 247 THIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KL 295
            +             ++  +  + Q +NR +AM++L+++LYD   K+    ++     K 
Sbjct: 259 RYQYEDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEAQAKIEAGKK 318

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +I  G    +IR+Y F   R+ DHR N     ++ V+ G +D+ I   L  
Sbjct: 319 KIEWG---SQIRSYVFDDRRVKDHRTNYQTTDVDAVMDGKLDEFIKAYLME 366


>gi|312220543|emb|CBY00484.1| similar to peptide chain release factor 1 [Leptosphaeria maculans]
          Length = 418

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 112/363 (30%), Positives = 199/363 (54%), Gaps = 26/363 (7%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
              ++  ++++        ++ ++    SPI++ +  +D+  +   +L ++I D  +D E
Sbjct: 52  EHKQLAAKLNDGFD----TRIAKKLGEYSPIVNALGKWDKANESVTELTSLIHDSTTDPE 107

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
           +R+LA  +++   +++      +   L+P        C+LE+R G GGSEAA+F GDLFR
Sbjct: 108 LRELAADDLIETREQLSAASQSLITALVPVHPFAHLPCLLELRPGAGGSEAAIFAGDLFR 167

Query: 135 MYERYAALRKWKVE---VLSSSDNDDGGY--KEIVATISGRGVFSRMKFESGVHRVQRVP 189
           MY  +     ++       + +   + G    E V  +     +   + E+GVHRVQRVP
Sbjct: 168 MYLAFCNRNGFRTNLLKYENINGTSEAGVPLSEAVLEVENDNAYGVFRCEAGVHRVQRVP 227

Query: 190 ATEASGRVHTSAATVAVLP------------EAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           ATE  GR HTSA +V VLP            +  + D  I +++++++ MRASG+GGQHV
Sbjct: 228 ATETKGRTHTSAVSVHVLPSLQENNSSEENFDDPDSDYYIDVKEVKVEVMRASGAGGQHV 287

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N T+SAVR+TH+PT  +V     +SQH+N+ +A  +LR+R+    R++   E S  R+  
Sbjct: 288 NKTESAVRLTHLPTNTVVAMQDSRSQHKNKEKAWALLRSRIAQSRREQREEEISNMRRSV 347

Query: 297 IG--SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMI 352
           IG     R +++RTYN+ Q R+TDHR  LT++ L+ V++G   ++ ++  + +    + +
Sbjct: 348 IGVAKMGRGDKVRTYNWGQQRVTDHRSGLTVHDLDDVMEGGQNLEKVMESVRSWLMERDV 407

Query: 353 GSA 355
            + 
Sbjct: 408 EAL 410


>gi|194246500|ref|YP_002004139.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma
           mali]
 gi|193806857|emb|CAP18286.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma
           mali]
          Length = 363

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 179/344 (52%), Gaps = 12/344 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +   K R  ++   ++ S   + + K  +       +  KI    +  +E +DL +++  
Sbjct: 26  LNKQKKRLKDLNHLINLSNFWENFEKAKKINQEFKSLNEKIYKMQKFHEEYRDLLSLLKI 85

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +++      + +      +++   +    +L   T D K+ IL +  G GG E+  +
Sbjct: 86  TKENTD----DFLFLEQTLLSLKKNIQDFEINILLNQTYDKKNAILILHPGAGGIESQDW 141

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY++YA  + +K+ VL     D  G K +   I G   +  +K E GVHR+ R+
Sbjct: 142 CEMLLRMYQKYAQKKNFKIVVLDYQVGDVAGLKSVSLLIKGVYAYGYLKSEKGVHRLVRI 201

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS  +  VLPE  E     I  E+++ID  R+SG+GGQHVNTTDSAVR+T
Sbjct: 202 SPFDSNSKRHTSFTSCDVLPEINENIEIKIKEEELKIDVFRSSGAGGQHVNTTDSAVRLT 261

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSE 304
           H+PT I++   +E+SQ +N+ RA+++L+ +L+  E K+        + +Q  I  G+   
Sbjct: 262 HLPTNIVINCQNERSQTRNKERALQILKTKLFQREIKKQEINLKLIQGVQKEISWGN--- 318

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y F   + + DHR N+  Y++E V+ G +D  I+  L  +
Sbjct: 319 QIRSYIFHPYQLVKDHRTNVESYQIESVIDGDLDLFISSFLKKN 362


>gi|260460705|ref|ZP_05808955.1| peptide chain release factor 2 [Mesorhizobium opportunistum
           WSM2075]
 gi|259033282|gb|EEW34543.1| peptide chain release factor 2 [Mesorhizobium opportunistum
           WSM2075]
          Length = 322

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 106/317 (33%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +    Q  ++   L  +  +   +  I +          +       
Sbjct: 1   MRERQGLEEGIASVKGLTQALEDNIGLIELGEEEGDEGVIAEAEAALRSMQGEAKA---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  R++KVEVL   D 
Sbjct: 57  -RQVETLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  +K ESGVHR+ R+   +++ R HTS A+V V P     I+
Sbjct: 116 EEAGIKSATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +D+   D+RIDT R+SGSGGQHVNTTDSAVRITHI TGI +   +E+SQH+N+ +A ++L
Sbjct: 176 IDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEML 235

Query: 274 RARLYDVERKRMA--NERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           R+RLY+ E K+       +   K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RSRLYEEELKKREAVANATEASKSDIGWG---HQIRSYVLQPYQLVKDLRTGVESTSPSS 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +DD +   L+  
Sbjct: 293 VLDGDLDDFMEASLSQR 309


>gi|164687096|ref|ZP_02211124.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
           16795]
 gi|164603981|gb|EDQ97446.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
           16795]
          Length = 349

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 11/351 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                 I   + +  + E  +++    D   K  +     S + + I+ ++    + +  
Sbjct: 1   MFPFD-IASKQAQIQKYEEEINKQDFWDDNEKAQKILQQNSDLKNIIAEFEGLNSDLE-- 57

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              I       E  +  + ++    K++ +  +E+    L     D  + +L I AGTGG
Sbjct: 58  EIEILIELGLEEEDESIEHDIEKSIKKLEDKIDEVKIKTLLNGKYDVNNAVLSINAGTGG 117

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            +A      + RMY R+A    +KV+ L    + + G K +   I G   +  +K E GV
Sbjct: 118 LDAQDCAQMILRMYLRWADQNNFKVKTLDMISDPEAGIKSVTLLIQGTNAYGYLKSEKGV 177

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +ASG+ HTS  +V V PE   +IDV+I   D++IDT R+SG+GGQHVN TD
Sbjct: 178 HRIVRISPFDASGKRHTSFVSVDVTPELDDKIDVEINPNDLKIDTYRSSGAGGQHVNKTD 237

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIG 298
           SAVRITHIPTGI+V   +E+SQ  N+  AMK+L+ +L  ++           +    QI 
Sbjct: 238 SAVRITHIPTGIVVQCQNERSQFANKDTAMKMLKGKLIHLKELENKERIEDIQGKYSQIT 297

Query: 299 SGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            G    +IR+Y F   + + DHR N  +  ++ V+ G I+  IN  L  ++
Sbjct: 298 WG---SQIRSYVFQPYKLVKDHRTNAEIGNVDSVMDGNINLFINEYLKMNK 345


>gi|290954114|ref|ZP_06558735.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312499|ref|ZP_06803267.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 241

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 7/240 (2%)

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
               L+I++G+GG+EA  +   L RMY R+A    +KV V   SD D  G K     I G
Sbjct: 2   NKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKIEG 61

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMR 228
              +  ++ E+G+HR+ R    +++ + HTS A+V + PE   +ID++I   D+R+DT R
Sbjct: 62  EYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYR 121

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG+GGQHVN TDSAVRITHIPT I+V + S++SQH+NR  AMK L+++LY++E ++   
Sbjct: 122 ASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYEMELQKRNA 181

Query: 288 ERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           E++   + K  IG G    +IR+Y   Q RI D R  +     + VL G +D  I   L 
Sbjct: 182 EKNALEDSKADIGWG---SQIRSYVLDQSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 238


>gi|148657451|ref|YP_001277656.1| peptide chain release factor 2 [Roseiflexus sp. RS-1]
 gi|148569561|gb|ABQ91706.1| bacterial peptide chain release factor 2 (bRF-2) [Roseiflexus sp.
           RS-1]
          Length = 317

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 105/318 (33%), Positives = 153/318 (48%), Gaps = 12/318 (3%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +    +   + +I   D++     DL  +    + DS   D+A       E        
Sbjct: 1   MQRLTRLKEEVERIEAIDRQLTALADLIELAAAEDDDSLQADIAAELKRTGEAIEA---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +   +L     DD+   L I+AGTGG++A  +   L RMY R+   R ++V ++  S+ 
Sbjct: 57  -LEIEVLLNGPYDDRDAFLSIKAGTGGTDAQDWAEMLLRMYMRWGERRGFQVALIDKSEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-ID 214
           ++ G K     + G   +   K E+GVHR+ R+    A     TS A V VLPE  +  +
Sbjct: 116 EEAGIKSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG----IMVTSSEKSQHQNRLRAM 270
           V I  EDIRID  R+SG GGQ VNTTDSAVRIT+ P      ++   +E+SQ QNR  AM
Sbjct: 176 VVIRPEDIRIDVFRSSGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAM 235

Query: 271 KVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLE 329
           +VLR RL + E +R   ER+  R  +    D   ++RTY       + DHR +     + 
Sbjct: 236 RVLRGRLLERELQRKREERARLR-GEYRQADFGNQMRTYYLHPYTLVKDHRTDHETSDVH 294

Query: 330 YVLQGYIDDIINPLLTAH 347
            VL G ID  I   L  +
Sbjct: 295 AVLDGDIDPFIEAYLRWN 312


>gi|260889274|ref|ZP_05900537.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
 gi|260860685|gb|EEX75185.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
          Length = 352

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 183/347 (52%), Gaps = 12/347 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVD--AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            I +LKN    +E +  E+   +     ++ +  +    ++ + S  +   ++   +   
Sbjct: 13  DIENLKNEIDGLEKKTFEADFWNSENSQEILKAISTNKKLLEEYSSLNGLFEDVSTIIEF 72

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I   ++  E        +    ++++   +     LL  +  D  + IL I +G GG+EA
Sbjct: 73  IEMGDNSFENE------LEQKAQDLKNEIDNFKTKLLLDEEYDMNNAILTINSGAGGTEA 126

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L+RMY+R+A    +KVE+L S   ++ G K +   I G   +  +K E GVHR+
Sbjct: 127 CDWAEMLYRMYDRWANRHDFKVEILDSLAGEEAGIKSVTLNIKGNYAYGYLKGEKGVHRL 186

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ R HTS A V V PE  +  ++DI  ED++IDT RASG+GGQHVNTTDSAV
Sbjct: 187 VRISPFDSNARRHTSFAAVNVTPEIEDDVEIDIRTEDLKIDTYRASGAGGQHVNTTDSAV 246

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITHIPT  +V   +E+SQ +NR  AMK+L+++L+++E ++   E +  +  +    +  
Sbjct: 247 RITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGTE-SKIEWG 305

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +IR+Y F     + DHR       +E V+ G ID  IN  L   ++
Sbjct: 306 SQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYAKS 352


>gi|262163922|ref|ZP_06031661.1| peptide chain release factor 2 [Vibrio mimicus VM223]
 gi|262172260|ref|ZP_06039938.1| peptide chain release factor 2 [Vibrio mimicus MB-451]
 gi|261893336|gb|EEY39322.1| peptide chain release factor 2 [Vibrio mimicus MB-451]
 gi|262027450|gb|EEY46116.1| peptide chain release factor 2 [Vibrio mimicus VM223]
          Length = 263

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 100/263 (38%), Positives = 150/263 (57%), Gaps = 7/263 (2%)

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
             E+     ++ +  +     D   C L+++AG+GG+EA  +   L RMY R+A  + +K
Sbjct: 1   MDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFK 60

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            EV+  S+ D  G K     I G   +  ++ E+GVHR+ R    ++ GR HTS A+  +
Sbjct: 61  TEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFI 120

Query: 207 LPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
            PE  E  D++I   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+
Sbjct: 121 YPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 180

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+ +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  
Sbjct: 181 NKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTG 237

Query: 323 LTLYKLEYVLQGYIDDIINPLLT 345
           +     + VL G +D  I   L 
Sbjct: 238 IENRNTQAVLDGDLDKFIEASLK 260


>gi|313157406|gb|EFR56829.1| putative peptide chain release factor 2 [Alistipes sp. HGB5]
          Length = 370

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 164/377 (43%), Gaps = 37/377 (9%)

Query: 3   FLSHKQICDLKNR-----------------FAEIELRMSESPSVDAYIKLTEEYAAISPI 45
            +   QI DL+ R                   E E +       D   +  E+   ++ I
Sbjct: 1   MILADQIKDLEQRSGALERCLNIEQKRIDLLNE-EEKTQVPDFWDNPDQAREQLRRVAAI 59

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
            + +  YD   ++ +DL  +                      + I +LE       + + 
Sbjct: 60  KAWVDDYDAVAKDVEDLALMPEFVKEGVVSEQEMDAHYAQTLERIEKLE----MRNMLRR 115

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
            +D    IL+I AG GG+EA  +   L RMY R+     +KV+VL     D+ G K    
Sbjct: 116 DEDKLGAILDINAGAGGTEALDWASMLLRMYTRWGEAHGYKVKVLDYQAGDEVGVKSCTL 175

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRI 224
              G   +  +K E+GVHR+ R+    A+ +  T+ A+V V P     I+V +   DI  
Sbjct: 176 EFEGEYAYGYLKSENGVHRMVRLSPFNANNKRQTTFASVFVSPAVDDTIEVTVNPSDIEW 235

Query: 225 DTMRASGSGGQHVNTTDSAVRITHI----PTGIMVT-----SSEKSQHQNRLRAMKVLRA 275
           DT RASG+GGQ+VN  ++AVR+ +      TG  V         +SQ  NR  AM++L++
Sbjct: 236 DTFRASGAGGQNVNKVETAVRLRYHGKDADTGEAVEFLIENMETRSQLMNRENAMRILKS 295

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LY  E  +    + A    K +I  G    +IR+Y F   R+ DHR  +    +E V+ 
Sbjct: 296 KLYQRELDKRMATQQALEASKKKIEWG---SQIRSYVFDDRRVKDHRTGVQTSAVEAVMD 352

Query: 334 GYIDDIINPLLTAHQAK 350
           G +D+ I   L  + A+
Sbjct: 353 GGLDEFIKAYLMEYGAE 369


>gi|91976917|ref|YP_569576.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB5]
 gi|91683373|gb|ABE39675.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisB5]
          Length = 322

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 159/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   ++ I   +++  +  ++  +      D  + +         ++  R    
Sbjct: 1   MQERTSLEDALTGIGKVERELTDNVEMIELGEAEGDDGVVSEAEAALKALKKEVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A    +K+E L  S+ 
Sbjct: 57  -RELEALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEESEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS ++V + P       
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIAESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+           K +IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEQAAADQAAKTEIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTAG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMAATLAQR 309


>gi|320335022|ref|YP_004171733.1| peptide chain release factor 2 [Deinococcus maricopensis DSM 21211]
 gi|319756311|gb|ADV68068.1| Peptide chain release factor 2 [Deinococcus maricopensis DSM 21211]
          Length = 363

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 99/363 (27%), Positives = 167/363 (46%), Gaps = 19/363 (5%)

Query: 7   KQICDLKN---------RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           +++  L+          R  E++  + +    +   +        + +      Y     
Sbjct: 6   EKLAALREYLDIPGKTRRLNELDKELEDPNLWNDQERARRVTQEATTLRRVTEGYASLSS 65

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + Q L  ++   + D +     +   +    +    E       L      +   I+ I+
Sbjct: 66  DAQGLSEMLDIASDDEKEMLEEEQASIQQRVDDLYRE------TLFTMKHSEAPAIIRIK 119

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           +G GG+E+  + G L RMY R+A  R +K E+L   D +  G       + G   +  M 
Sbjct: 120 SGAGGTESQDWAGMLMRMYIRWAERRGFKTEILDQQDGEQAGITSAEFIVRGDRAYGMMA 179

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED--IRIDTMRASGSGGQ 235
            E GVHR+ RV   +++ R HTS A+V ++PE  E  +DI + D  +R+D  R+ G+GGQ
Sbjct: 180 PEHGVHRLVRVSPFDSNNRRHTSFASVDIVPEVPEEQIDIHVPDSDVRVDVYRSQGAGGQ 239

Query: 236 HVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
            VNTTDSAVR+TH+PTG+MV     +SQ +NR  A ++L+ RLYD+E K+   E    R 
Sbjct: 240 GVNTTDSAVRVTHLPTGLMVAIQVTRSQIKNREMAFQILKQRLYDIEVKKREAEEMKARG 299

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            Q    +   +IR+Y   +  + DHR  +  +    VL G I++ +   L     K    
Sbjct: 300 EQKA-IEWGSQIRSYVLDKQYVKDHRTGVMRHDTGNVLDGDIEEYMWAGLEWLAGKRAAE 358

Query: 355 ASE 357
            ++
Sbjct: 359 NND 361


>gi|75675907|ref|YP_318328.1| peptide chain release factor 2 [Nitrobacter winogradskyi Nb-255]
 gi|74420777|gb|ABA04976.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
           winogradskyi Nb-255]
          Length = 322

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 162/317 (51%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   ++ I   +++ +++  +  +    N ++ I +         ++  R    
Sbjct: 1   MQERTSLEDSLAGIGKVERELEDQIGMIELGEAENDEAVIDESENALKALKKEVDR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  R +KVE L  +  
Sbjct: 57  -RELEALLSGEADRFDTYLEVHAGAGGTESQDWAAMLLRMYTRWAEKRGFKVEYLEETPG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     +SG   +  +K E+GVHR+ R+   +++ R HTS ++VA+ P     I 
Sbjct: 116 EEAGIKSATVQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R DTMR+ G+GGQHVN T+SAVR+TH+PTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E KR           K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKRREEQAAADQAAKTDIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTSG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +DD +   L   
Sbjct: 293 VLDGNLDDFMAATLAQR 309


>gi|302131691|ref|ZP_07257681.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato NCPPB 1108]
          Length = 304

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 104/309 (33%), Positives = 158/309 (51%), Gaps = 12/309 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++ I+  +        + +DL  +  +    + I D+A           +     + +  
Sbjct: 2   LAQIVETLDEMSSGLVDAKDLLLMSAEEEDQAAIDDVAAEVERLRASLEK-----LEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S  +  G K
Sbjct: 57  MFSGEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  ++DI   
Sbjct: 117 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGTRRHTSFSAVFVSPEIDDNIEIDINPS 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRARLY+
Sbjct: 177 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 236

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++     +   + K  IG G    +IR+Y     RI D R N+     + VL G ID
Sbjct: 237 QEVQKRNAASQALEDTKSDIGWG---HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDID 293

Query: 338 DIINPLLTA 346
           + +   L  
Sbjct: 294 EYLIASLKQ 302


>gi|261881148|ref|ZP_06007575.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361]
 gi|270332153|gb|EFA42939.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361]
          Length = 374

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 89/374 (23%), Positives = 163/374 (43%), Gaps = 36/374 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+  R                F E +LR       D   +   +   +  + 
Sbjct: 1   MITSDQLKDVLERTTKLHHYLNIDKKQIEFEEEQLRTQAPDFWDDPKRAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           + +  Y   +    +L      +  +    +    +   + K I +LE    +  + +  
Sbjct: 61  NWLKDYSDVELLANELELAFDYYKEELVTEEEVDADYAKVIKAIEDLE----FKNMLRSE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I +G GG+E+  +   L RMY R+     +KV + +  D D+ G K +  T
Sbjct: 117 EDSMDAVLKINSGAGGTESQDWAQMLMRMYMRWCESHGYKVTITNLQDGDEAGIKSVTMT 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
           + G    +  +K E+GVHR+ RV    A G+  TS A+V + P   +          +  
Sbjct: 177 VEGGEFAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFISPLVDDTIEVYVDPARLSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +N+ +AM +L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEKEEILIENTETRDQPKNKAKAMLLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD E K+    ++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDREMKKRLEAQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMD 353

Query: 334 GYIDDIINPLLTAH 347
           G +D  I   L  +
Sbjct: 354 GDLDGFIKAYLMEY 367


>gi|327262069|ref|XP_003215848.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Anolis carolinensis]
          Length = 394

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 128/292 (43%), Positives = 201/292 (68%), Gaps = 4/292 (1%)

Query: 55  KKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
           K++E  D   +  +  ++ ++R LA+ E++  ++EI EL+ +I   L+P +  D+   I+
Sbjct: 82  KEEELGDTERLAREDENE-DLRKLAETEIVFCQEEIAELKRQIMLHLIPSEETDESDLIM 140

Query: 115 EIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFS 174
           E+ +G GG EA LF  ++F MY++YAA + W  ++L  + +D GG +   A I+G   + 
Sbjct: 141 EVTSGVGGQEAMLFTAEMFDMYQQYAAYKNWNFDILEYAPSDIGGLRYASAAIAGHEAYR 200

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
           +MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +++RI+T RASG+GG
Sbjct: 201 QMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPNEINLTINPKELRIETKRASGAGG 260

Query: 235 QHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVNTTDSAVRI HIPTG++     E+SQ +N+ +A+++LRA+LY+++ +  + +R   R
Sbjct: 261 QHVNTTDSAVRILHIPTGVVSECQQERSQIKNKAKAIQILRAKLYNMKLEDESRKRETAR 320

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPL 343
           K+Q G+  RSE+IRTYNF Q R+TDHRI+ +++ +E  + G   +D++I  L
Sbjct: 321 KIQTGTKGRSEKIRTYNFPQDRVTDHRISRSVHHIEQFMLGEELLDEMIQAL 372


>gi|299133776|ref|ZP_07026970.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
 gi|298591612|gb|EFI51813.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
          Length = 322

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   +  I   +++ +++  +  +    N ++ + +         +   R    
Sbjct: 1   MQERTSLENQLGGIGRTERELEDQIGMIELGEAENDEAVVTEAENALKALKKDVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  + +KVE L  +  
Sbjct: 57  -QELEALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEYLEETQG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS +++A+ P       
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDINESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+           K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEQAAADQAAKTDIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTSG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMAATLAQR 309


>gi|21282445|ref|NP_645533.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|88194533|ref|YP_499328.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|161509023|ref|YP_001574682.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|21203882|dbj|BAB94581.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|87202091|gb|ABD29901.1| peptide chain release factor 2, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|160367832|gb|ABX28803.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 291

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 102/289 (35%), Positives = 155/289 (53%), Gaps = 14/289 (4%)

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++ +   +    DL Q  +    K            LL     D  + ILE+  G GG+
Sbjct: 6   DLLQEEFDEEMKEDLEQEVINFKAKVDE-----YELQLLLDGPHDANNAILELHPGAGGT 60

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+  +   LFRMY+RY   + +KVE +     D+ G K +   I G   +  +K E GVH
Sbjct: 61  ESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVH 120

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           R+ R+   ++SGR HTS A+  V+P+      +++I  +DI +DT RASG+GGQH+N T+
Sbjct: 121 RLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTE 180

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IG 298
           SA+RITH P+GI+V   +E+SQ +NR  AMK+L+++LY ++ +  A E +  R  Q  IG
Sbjct: 181 SAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIG 240

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            G    +IR+Y F     + DHR N    K++ V+ G I   I   L  
Sbjct: 241 WG---SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 286


>gi|167764194|ref|ZP_02436321.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC
           43183]
 gi|167698310|gb|EDS14889.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC
           43183]
          Length = 372

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 156/372 (41%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +   +                      D       +   +  + 
Sbjct: 1   MITIEQLKDIKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             IS Y++ K    +L      +  +    +            +  LE +          
Sbjct: 61  QWISGYNEVKVLADELQLAFDFYKDELVTEEEVDEAYAKASAAVEALELKNMLREEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ G K     
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYLRYAETHGYKATISNLQEGDEAGIKTCTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           ISG   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I    I  D
Sbjct: 177 ISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEQARISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR  AM+ LR+ 
Sbjct: 237 TFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  +   L  
Sbjct: 354 KIDGFVKAYLME 365


>gi|262395207|ref|YP_003287061.1| peptide chain release factor 2 [Vibrio sp. Ex25]
 gi|262338801|gb|ACY52596.1| peptide chain release factor 2 [Vibrio sp. Ex25]
          Length = 260

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 100/260 (38%), Positives = 151/260 (58%), Gaps = 7/260 (2%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + E   ++ +  +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K EV
Sbjct: 1   MEEKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEV 60

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           +  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE
Sbjct: 61  IEVSEGEVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 210 AAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
             E  D+DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ 
Sbjct: 121 IDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 268 RAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
           +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  +  
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGIEN 237

Query: 326 YKLEYVLQGYIDDIINPLLT 345
              + VL G +D  I   L 
Sbjct: 238 RNTQAVLDGDLDKFIEASLK 257


>gi|312375908|gb|EFR23156.1| hypothetical protein AND_13424 [Anopheles darlingi]
          Length = 406

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 125/318 (39%), Positives = 183/318 (57%), Gaps = 5/318 (1%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +S ++          +    L  +  D   D  I+ L +          R     +  +L
Sbjct: 83  LSNVVEMYEQRKIVVENLGSLKEL-KDDKDDEMIQLLKEEREAYSNILGRLDREIMEGIL 141

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
              + ++  S I+E+ AG GG EA LF  +LF MY  Y   + W+VE+L +   D GG +
Sbjct: 142 SMDEDEEYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEHKDWEVEMLQTEGTDLGGIR 201

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED 221
                I+G  V+  +K+E GVHRVQR+PATE SGR+HTS  TVA++P   + +VD+  +D
Sbjct: 202 HATIIINGTDVYRCLKYEGGVHRVQRIPATEKSGRIHTSTVTVAIIPRPDDFEVDLKEKD 261

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           ++I+T RASG+GGQHVNTTDSAVRI H+PTGI V   +E+SQ +NR  A + L A+L   
Sbjct: 262 LKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQVKNREIAKQKLVAKLMQQ 321

Query: 281 ERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQG--YID 337
           E +       A +K Q+G   R+E+IRTYNF+Q RITDHRI   T++ L+  L+G   +D
Sbjct: 322 ELEARFASTQALKKSQVGQSLRNEKIRTYNFNQDRITDHRIEGGTVHNLKGFLEGGQQLD 381

Query: 338 DIINPLLTAHQAKMIGSA 355
           D+I+ L  + + K +   
Sbjct: 382 DMIDKLHRSERRKQLLEL 399


>gi|221134749|ref|ZP_03561052.1| Protein chain release factor B, RF-2 [Glaciecola sp. HTCC2999]
          Length = 248

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 92/248 (37%), Positives = 136/248 (54%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +    +D   C L+I++G+GG+EA  +   L RMY R+     +K E++  SD D  G K
Sbjct: 1   MFAKPNDGNDCYLDIQSGSGGTEAQDWANMLLRMYLRWGEENGFKTELIEVSDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                  G   F  ++ E+GVHR+ R    ++  R HTS A+  + PE  +         
Sbjct: 61  SATIRFGGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASAFIYPEINDDIDIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT RASG+GGQHVN TDSAVRITH+PT I+V   +++SQH+N+ +A K L+A+LY+
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL G ++
Sbjct: 181 YELQKQNEEKQAMEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGNLN 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|226324356|ref|ZP_03799874.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758]
 gi|225206804|gb|EEG89158.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758]
          Length = 313

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 160/312 (51%), Gaps = 6/312 (1%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   +      +   +D++ +I     + +   + +I+    + E      ++ 
Sbjct: 1   MKELRKMQDCVKEVRDLESSYEDINALIELTEEEEDREMIKEIQREIAKFEKEF--EDLR 58

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              L     D  + I+ + AG GG+++  +   L+RMY RYA  + +++ VL   D D  
Sbjct: 59  IRTLLSGEYDSCNAIVTLHAGAGGTDSCDWANMLYRMYTRYAQSKGFQITVLDYQDGDIT 118

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDI 217
           G K I   ++G   +   + E GVHR+ R+    ++G+  TS A+  V      +ID+++
Sbjct: 119 GLKGITFEVTGDNAYGYFQSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEDDIDIEL 178

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +D+RIDT R+SG+GGQH+N T SAVRITH+PTGI+V   +E+SQ  N+ +AM++L+A+
Sbjct: 179 NDDDLRIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQLFNKDKAMQMLKAK 238

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY 335
           LY ++++    + S  R  ++   +   +IR+Y       + DHR       +  VL G 
Sbjct: 239 LYLLKKQEQEEKVSGIR-GEVQDINFGSQIRSYILHPYNLVKDHRTGEETGNVSAVLDGE 297

Query: 336 IDDIINPLLTAH 347
           +D  IN  L   
Sbjct: 298 LDPFINAYLKQR 309


>gi|85715460|ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
 gi|85697655|gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
          Length = 322

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 162/317 (51%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   ++ I   +++ +++  +  +    N  + I +         ++  R    
Sbjct: 1   MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAVITESENALKTLRKEVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A  R +KVE L  +  
Sbjct: 57  -RELEALLSGEADRFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKRGFKVEYLEETPG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS ++VA+ P     I 
Sbjct: 116 EEAGIKSATVQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+           K +IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEQAAADQAAKTEIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTSG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMAATLAQR 309


>gi|301613862|ref|XP_002936423.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           [Xenopus (Silurana) tropicalis]
          Length = 420

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 117/241 (48%), Positives = 166/241 (68%), Gaps = 3/241 (1%)

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             +D   I+E+ AG GG EA LF  ++F MY+ YA  + W  ++L    ++ GG +    
Sbjct: 156 ESEDNDLIMEVTAGVGGQEAMLFTAEMFDMYQHYAVHKNWSFDLLEYFSSELGGLRHATV 215

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRID 225
           +I G+  +  +KFE GVHRVQRVP TE  GR+HTS  TVA+LP+ +EI++ I  +D+RI+
Sbjct: 216 SIGGQDAYKCLKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPSEINLVINPKDLRIE 275

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T RASG+GGQHVNTTDSAVRI HIPTG++     E+SQ +N+ +AM+VLRA+LY ++ + 
Sbjct: 276 TKRASGAGGQHVNTTDSAVRIVHIPTGVVSECQQERSQIKNKEKAMQVLRAKLYTMKLEE 335

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINP 342
             ++R   RK+QIG+  RSE+IRTYN+ Q R+TDHRI  +L+ +E  L G   +DD+I  
Sbjct: 336 ETSKRYNARKIQIGTRGRSEKIRTYNYPQDRVTDHRIGKSLHNIEGFLFGEELLDDLIQS 395

Query: 343 L 343
           L
Sbjct: 396 L 396


>gi|218131879|ref|ZP_03460683.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697]
 gi|317474512|ref|ZP_07933786.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA]
 gi|217986182|gb|EEC52521.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697]
 gi|316909193|gb|EFV30873.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA]
          Length = 372

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 158/372 (42%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +   +                      D       +   +  + 
Sbjct: 1   MITIEQLKDIKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             IS Y++ +    +L      +  +    +            +  LE +          
Sbjct: 61  QWISGYNEVRILADELQLAFDFYKDELVTEEEVDEAYAKASAAVEALELKNMLREEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ G K     
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKACTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I+G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I + +I  D
Sbjct: 177 IAGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR  AM+ LR+ 
Sbjct: 237 TFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  +   L  
Sbjct: 354 KIDGFVKAYLME 365


>gi|194377328|dbj|BAG57612.1| unnamed protein product [Homo sapiens]
          Length = 468

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 125/334 (37%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 89  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 148

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I+++I  L NE+   L+PK+  D    ILE+ AG  T
Sbjct: 149 MCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTT 208

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG GV+  +K+E 
Sbjct: 209 GGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEG 268

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 269 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHV 328

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 329 NKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQ 388

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           +G+  +SERIRTYNF+Q R++DHRI   +  ++ 
Sbjct: 389 VGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKA 422


>gi|291568918|dbj|BAI91190.1| peptide chain release factor 2 [Arthrospira platensis NIES-39]
          Length = 316

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 89/315 (28%), Positives = 148/315 (46%), Gaps = 10/315 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
            + +  ++ +   + +  ++   +  ++   + +S  ++     V       R       
Sbjct: 1   MSDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRW-----E 55

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              L     D    +L I AG GG++A  +   L RMY R+   + +KV +   S+ D+ 
Sbjct: 56  LQQLLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEA 115

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE--IDVD 216
           G K     + G   +  +K E G HR+ R+    A+G+  TS A V ++P   E  I++D
Sbjct: 116 GIKSATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLD 175

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           IP +D+ I T RA G GGQ+VN  ++AVRI HIPTGI V  + E+SQ QNR +AM +L+A
Sbjct: 176 IPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKA 235

Query: 276 RLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQG 334
           +L  V +++ A   +  R   +       +IR Y F   + + D R       +  V+ G
Sbjct: 236 KLLVVAQEQRAQAIAEIRGDLVE-AAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNG 294

Query: 335 YIDDIINPLLTAHQA 349
            +D  I   L     
Sbjct: 295 ELDGFIQAYLRQENQ 309


>gi|189464495|ref|ZP_03013280.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM
           17393]
 gi|189438285|gb|EDV07270.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM
           17393]
          Length = 371

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 99/372 (26%), Positives = 162/372 (43%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEI--------------ELRM--SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +              E ++        D       +   +  + 
Sbjct: 1   MITIEQLKDVKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I+ Y++ K   ++L      +  +    +            I ELE +          
Sbjct: 61  QWIAGYNEIKTLSEELQLAFDFYKDELVTEEEIDEAYAKASTAIDELELKNMLRDEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ G K     
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKAVISNLQEGDEAGIKTCTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           ISG   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I + +I  D
Sbjct: 177 ISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR  AM+ LR+ 
Sbjct: 237 TFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|154310299|ref|XP_001554481.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10]
 gi|150851401|gb|EDN26594.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10]
          Length = 402

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 125/373 (33%), Positives = 192/373 (51%), Gaps = 32/373 (8%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +L      +    SE+       K+ +    +  +   +  +++ K+   +L  ++ D  
Sbjct: 23  NLAAEHDRLSSETSETFD----AKIAKRIGELQDVAVALRKWEETKESLSELDDLLKDSA 78

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D E+R+LA  ++      + EL   +   L PK    +  C+LEIR G GG EAA+F  
Sbjct: 79  TDEELRELAVEDLTTTTAHLEELSRNLTTSLTPKHPFAELPCLLEIRPGAGGGEAAIFAA 138

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHR 184
           DL RMY  Y A ++++  ++     D  G        E+V  I   G +  ++ E+GVHR
Sbjct: 139 DLLRMYRAYCARKRFRSTIIKYETTDGEGAGSDAPISEVVLEIESSGSYDSLRGEAGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLP-----------------EAAEIDVDIPLEDIRIDTM 227
           VQRVPATE  GR HTSA +V VLP                      D  +   D+R D M
Sbjct: 199 VQRVPATEKQGRTHTSAVSVMVLPSFPTTGQEGQEYWEADLNDPNSDYYVNPADVRTDVM 258

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RA G+GGQHVNTTDSAVR+TH+PT  +V+    +SQ QNR +A +VLR+RL   +R+   
Sbjct: 259 RARGAGGQHVNTTDSAVRLTHVPTNTVVSMQEGRSQLQNRQKAWQVLRSRLAAAKREARE 318

Query: 287 NERSANRKLQIG--SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINP 342
            +    R+  IG     R ++IRTYN+ Q R+TDHR  L+++ L+ V++G   ++ II+ 
Sbjct: 319 EQLINLRRSVIGVAKMGRGDKIRTYNWGQQRVTDHRSGLSVHNLDDVMEGGDELEKIIDS 378

Query: 343 LLTAHQAKMIGSA 355
           +      + I   
Sbjct: 379 VKAWFSEQEILGL 391


>gi|114651379|ref|XP_001150035.1| PREDICTED: mitochondrial translational release factor 1 isoform 1
           [Pan troglodytes]
          Length = 455

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 125/334 (37%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I+++I  L NE+   L+PK+  D    ILE+ AG  T
Sbjct: 136 MCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG GV+  +K+E 
Sbjct: 196 GGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEG 255

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHV
Sbjct: 256 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHV 315

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N TDSAVR+ HIPTG++V    E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ
Sbjct: 316 NKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQ 375

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           +G+  +SERIRTYNF+Q R++DHRI   +  ++ 
Sbjct: 376 VGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKA 409


>gi|167517235|ref|XP_001742958.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778057|gb|EDQ91672.1| predicted protein [Monosiga brevicollis MX1]
          Length = 416

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 149/383 (38%), Positives = 228/383 (59%), Gaps = 34/383 (8%)

Query: 6   HKQICDLKNRFAEIELRMS----ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  + +  A +  R++    E+ + +    ++   A ++ +   I   D+  +   +
Sbjct: 20  QQHLQSIVDGHATLSERLTQLTTENGAPNEIASISRRLAKVAALTEVIHARDKALEAIAE 79

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  ++     DSE+R+LA  ++   + +++ELE E+   L+P+DT D+ S ++E+RAGTG
Sbjct: 80  LQDMLKTEE-DSELRELAASDLAQEQTQLQELEQELLQALVPEDTADEASAVVELRAGTG 138

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EAALF  DL  MY+  A  ++W  +VL     DDGG +E   +ISG GVF  +KFESG
Sbjct: 139 GREAALFAHDLKLMYQGLAQQQRWSFKVLDEQATDDGGLREASLSISGSGVFGMLKFESG 198

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P TE +GR+HTS ATVAVLPE  +++V++  +DI ++T RA G+GGQHVNTTD
Sbjct: 199 VHRVQRIPTTETAGRIHTSTATVAVLPEPTDVEVEVLDKDIHVETYRAGGAGGQHVNTTD 258

Query: 242 SAVRITHIPTGIMV-TSSEKSQH-------------------------QNRLRAMKVLRA 275
           SAVR+TH+PTG +V   +E+SQH                         QN+  AMKVL+A
Sbjct: 259 SAVRLTHLPTGTVVACQTERSQHKLEHIVSTRVAIDQCVLFNRVHHLVQNKAAAMKVLKA 318

Query: 276 RLYDVERKRMANERSANRKLQIGS--GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           R++   R +   ER A R+ QI +  G+RS+RIRTYN  Q R+TDHRI  +L  +E +L+
Sbjct: 319 RIFAQVRAKQEEERRAARREQISTTPGERSDRIRTYNMPQDRVTDHRIKASLNNVETLLK 378

Query: 334 G-YIDDIINPLLTAHQAKMIGSA 355
           G  + ++I  L     ++ +   
Sbjct: 379 GISLPELIVQLQQFDNSQRLADL 401


>gi|113461617|ref|YP_719686.1| peptide chain release factor 2 [Haemophilus somnus 129PT]
 gi|112823660|gb|ABI25749.1| bacterial peptide chain release factor 2 (bRF-2) [Haemophilus
           somnus 129PT]
          Length = 260

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 94/261 (36%), Positives = 144/261 (55%), Gaps = 7/261 (2%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + +    + +  +     D+  C ++++AG+GG+EA  +   L RMY R+A  + +K E+
Sbjct: 1   MEKKLAALEFRRMFSGQHDNCDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTEL 60

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           +  S  D  G K     I+G   F  ++ E+G+HR+ R    +++ R HTS A   V PE
Sbjct: 61  VEVSSGDVAGLKSATIRIAGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPE 120

Query: 210 AAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
             +         D+RID  RASG+GGQHVN T+SAVRITHIP+GI+V   + +SQHQN+ 
Sbjct: 121 IDDDIEIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKD 180

Query: 268 RAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
           +AMK L+A+LY++E  +   ++    + K  IG G    +IR+Y     RI D R  +  
Sbjct: 181 QAMKQLKAKLYEMEIMKKNADKQAMEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVEN 237

Query: 326 YKLEYVLQGYIDDIINPLLTA 346
              + VL G +D  I   L A
Sbjct: 238 RNTQAVLDGDLDRFIEASLKA 258


>gi|89898648|ref|YP_515758.1| peptide chain release factor 2 [Chlamydophila felis Fe/C-56]
 gi|89332020|dbj|BAE81613.1| hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 315

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 110/319 (34%), Positives = 162/319 (50%), Gaps = 14/319 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           ++E  A++   +S    +  K             ++S++      + ++         + 
Sbjct: 1   MSERIASLKRQVSDYQNFKSKVDNLT-----FFLNDSEASSDPEFREDLEKEFSICENIL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
           +E     L     D  SC L I AG GG+E+  +V  LFRMY R+A+  +WKVEV+   D
Sbjct: 56  SEWEIQRLLSGEVDKNSCFLTINAGAGGTESCDWVEMLFRMYCRWASEHRWKVEVIDRQD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            D  G K +    SG   +   K E GVHR+ R+    ++ + HTS A+V V P    EI
Sbjct: 116 GDVAGIKHVTVKFSGDYAYGYAKAERGVHRLVRISPFNSNAKRHTSFASVDVYPEIDDEI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+RIDT R+SG+GGQHVN TDSAVRITHIPTGI V   +E+SQ QNR   MK+
Sbjct: 176 EIDIQPNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGITVSCQNERSQLQNRESCMKM 235

Query: 273 LRARLYDVERKRMANERSANRKL--QIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLE 329
           LRAR+Y    +    ++   RK   +I  G    +IR Y F     + D R       ++
Sbjct: 236 LRARMYQQILQERLEKQLLERKNKKEIAWG---SQIRNYVFQPYTLVKDVRTGYETGNVQ 292

Query: 330 YVLQGY-IDDIINPLLTAH 347
            ++ G  +DD +   L  +
Sbjct: 293 AMMDGELLDDFVKAYLAEY 311


>gi|90417703|ref|ZP_01225615.1| peptide chain release factor 2 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337375|gb|EAS51026.1| peptide chain release factor 2 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 321

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 108/317 (34%), Positives = 157/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I  ++  +Q  Q+  +L  +  +      +++          +  +    
Sbjct: 1   MRERQFLDTAIGAVNRLNQSLQDNIELIAMGEEEKDAEIVKEAEAAIREIKSEADK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     +E+ +G GG+E+  +   L RMY R+A   K+KVEVL     
Sbjct: 57  -RQIETLLSGEADSNDTYVEVHSGAGGTESQDWAAMLQRMYMRWAERAKFKVEVLEEHSG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     I G   +  MK ESGVHR+ R+   ++  R HTS A+V V P     ID
Sbjct: 116 EEAGIKSATLLIKGHNAYGWMKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDSID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +D+   D+RIDT RASG+GGQHVNTTDSAVRITH+ TGI+V   +E+SQH+NR  A  +L
Sbjct: 176 IDVNESDVRIDTYRASGAGGQHVNTTDSAVRITHLETGIVVQCQAERSQHKNRATAWNML 235

Query: 274 RARLYDVE--RKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E  R+  A    A  K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEAELERRENAANAEAASKTDIGWG---HQIRSYVLQPYQMVKDLRTGIESTSPQD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  +   L   
Sbjct: 293 VLDGGLDPFMEGALAHR 309


>gi|319898909|ref|YP_004159002.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
 gi|319402873|emb|CBI76424.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
          Length = 333

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 165/337 (48%), Gaps = 16/337 (4%)

Query: 29  VDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLA 85
            +   K      E   +   ++   ++ Q  +E  +L  +  + N    I +     +  
Sbjct: 3   WNNAQKAQDVMRERQNLENSMNSTQLFTQTLEECIELIAMGEEENDMGIIAEAENTILQL 62

Query: 86  IEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKW 145
            ++  +         +L     D     LEI AG GG E+  +   L RMY R+A   K 
Sbjct: 63  KKEIDK-----RRIEMLLSGEADSNDTYLEIHAGAGGIESQDWASMLLRMYSRWAEQNKM 117

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KVEVL + D ++ G K     I G   +  +K ESGVHR+ R+   +++ R HTS A++ 
Sbjct: 118 KVEVLETHDGEEAGIKSATLLIKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIW 177

Query: 206 VLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQH 263
           + P     I+VD+   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH
Sbjct: 178 IYPVVNENIEVDLSDADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQH 237

Query: 264 QNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHR 320
           +NR  A  +LRARLY+ E K+   E +     K +IG G    +IR+Y     + + D R
Sbjct: 238 KNRATAWSMLRARLYEEELKKREEETNAVEASKTEIGWG---HQIRSYVLQPYQLVKDLR 294

Query: 321 INLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
             +     + VL G +D  I   L            +
Sbjct: 295 TGVENTDPQTVLNGDLDIFIEAALAQRVQGKKQKLED 331


>gi|257791746|ref|YP_003182352.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243]
 gi|317487783|ref|ZP_07946376.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA]
 gi|325831767|ref|ZP_08164956.1| peptide chain release factor 2 [Eggerthella sp. HGA1]
 gi|257475643|gb|ACV55963.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243]
 gi|316913058|gb|EFV34574.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA]
 gi|325486436|gb|EGC88886.1| peptide chain release factor 2 [Eggerthella sp. HGA1]
          Length = 364

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 165/347 (47%), Gaps = 18/347 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +     A+++  +++    D            S +   I+ YD+      D       
Sbjct: 25  IDERAAELAKLDEEIAQPGFWDDASHAQSVSKQASVLRDTIAEYDEAAALLDDARAAFDL 84

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D    + A   +  +++ +  LE          +  D    IL +  G+GG EA  +
Sbjct: 85  ASEDELFAEEASAALDKLDELLDALE----ISSWFSERFDGGDAILTVNPGSGGLEAQDW 140

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L+RMY RYA  + WKV VL     +  G  +    I GR  F  +K ESGVHR+ R+
Sbjct: 141 TDMLYRMYVRYAEKKDWKVTVLDVVPGEGIGLDKATIQIEGRNAFGMLKSESGVHRLVRI 200

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
             T+   R HT+ A V VLP    +I+VD+   D+R+D  R+SG GGQ VNTTDSAVR+T
Sbjct: 201 SPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQCVNTTDSAVRLT 260

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR---- 302
           HIPT I+V   +EKSQ QN+  A +VL+A+LY+ E ++   E +  R      GDR    
Sbjct: 261 HIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRQEELAELR------GDRMDNT 314

Query: 303 -SERIRTYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR Y  +    + D R  +    ++ VL G +D+ +       
Sbjct: 315 FGSQIRNYVLYPYQMVKDVRSGIETGNVDAVLDGELDEFVIGYHRWR 361


>gi|86750123|ref|YP_486619.1| peptide chain release factor 2 [Rhodopseudomonas palustris HaA2]
 gi|86573151|gb|ABD07708.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris HaA2]
          Length = 322

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   ++ I   +++  +  ++  +      +  +R+         ++  R    
Sbjct: 1   MQERTSLEDSLTGIGKVERELSDNIEMIELGEAEGDEGVVREAEAALKALKKEVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A    +KVE L  S+ 
Sbjct: 57  -RELEALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKVEYLEESEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS ++V + P       
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+TH+PTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIAESDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+           K +IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEQAAADQAAKTEIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTAG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMAATLAQR 309


>gi|260914424|ref|ZP_05920893.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325]
 gi|260631525|gb|EEX49707.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325]
          Length = 248

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 92/249 (36%), Positives = 141/249 (56%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                +SG   F  ++ E+G+HR+ R    +++ R HTS +   V PE  +         
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITHIP+GI+V   +++SQH+N+ + MK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 MELQKKNADKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 RFIEASLKA 246


>gi|198274326|ref|ZP_03206858.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135]
 gi|198272816|gb|EDY97085.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135]
          Length = 371

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 157/372 (42%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEI--------------ELRM--SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +              E ++        D       +   +  + 
Sbjct: 1   MITIEQLKDVKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKALQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I+ Y + K    +L      +  +    +            + ELE +          
Sbjct: 61  QWITGYQEVKTLADELQLSFDFYKDELVTEEEVDEAYSKAISAVEELELKNMLRSEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY R+A    +K+ V +  + D+ G K +   
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMN 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +    +  D
Sbjct: 177 IEGSYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +N+  AM+ LR+ 
Sbjct: 237 TFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMEEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|195031191|ref|XP_001988305.1| GH11092 [Drosophila grimshawi]
 gi|193904305|gb|EDW03172.1| GH11092 [Drosophila grimshawi]
          Length = 395

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 118/354 (33%), Positives = 194/354 (54%), Gaps = 12/354 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+  +  +  R++ + +   Y +L+     + P+++ +  +   ++       +  +
Sbjct: 35  LESLRQEYYAL--RVNAAGNSSLYERLSR----LDPVVNSLEKHRALQRNITPKQELAAE 88

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D     + +   +  +   ++ E+ +  LL   D  D  + I E++AG GG EA LF
Sbjct: 89  KDEDMRAL-MQEENNVYADLLRKQEEDMLQELLTLADNVDYPALIFEVKAGAGGQEAMLF 147

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
             +L+ MY  Y     W+ E  +    D GG +     +S    ++ +++E+GVHRVQRV
Sbjct: 148 AQELYDMYTSYFEHMGWEYEEFAYETTDIGGLRHANLLVSDPEAYNWLRYEAGVHRVQRV 207

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P TE SGR+HTS A++ V+P  A++ V +   D++I+T RASG+GGQHVNTTDSAVRI H
Sbjct: 208 PTTEKSGRMHTSTASITVIPRPADVHVHLTDRDLKIETKRASGAGGQHVNTTDSAVRIVH 267

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG+ V   SE+SQ +NR  A+K L+A+L   + +     + A RK Q G+ +R+E+IR
Sbjct: 268 LPTGLAVECQSERSQLKNRELALKRLQAKLMQQQLESAEASKQATRKSQQGNLNRNEKIR 327

Query: 308 TYNFSQGRITDHRI--NLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSASE 357
           TYNF Q R+TDHR+    TL+ L   L G   +  +I  L    +   +    E
Sbjct: 328 TYNFMQDRVTDHRVQQGGTLHNLSGFLAGGQQLSVLIERLQLEQRKSKLVELLE 381


>gi|92117370|ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14]
 gi|91800264|gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
           hamburgensis X14]
          Length = 322

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 161/316 (50%), Gaps = 13/316 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   ++ I   +++ +++  +  +    N  + + D         ++  R    
Sbjct: 1   MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAIVNDSENALKNLKKEVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D  +  LE+ AG GG+E+  +   L RMY R+A  R +K+E L  +  
Sbjct: 57  -RELEALLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYARWAEKRGFKIEYLEETPG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     +SG   +  +K E+GVHR+ R+   +++ R HTS ++VA+ P     I 
Sbjct: 116 EEAGIKSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY +E K+           K  IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYQIELKKREEQAAADQAAKTDIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTSG 292

Query: 331 VLQGYIDDIINPLLTA 346
           VL G +D+ +   L  
Sbjct: 293 VLDGDLDEFMAATLAQ 308


>gi|73989052|ref|XP_542584.2| PREDICTED: similar to mitochondrial translational release factor 1
           isoform 1 [Canis familiaris]
          Length = 456

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 130/372 (34%), Positives = 207/372 (55%), Gaps = 23/372 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +      +     L   +A ++P+ +      + +Q  ++L +
Sbjct: 75  QKYMEDLNKEYRTLDQCLQHLSVNEGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEELDS 134

Query: 65  VIGD--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +        + ++++LA  E   I ++I  L +E+   L+PK+  D    I+E+ +G  T
Sbjct: 135 MCKSLSKQDEKQLQELALEERQTIAEKINVLYSELFQSLVPKEKYDKNDVIIEVTSGRTT 194

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND------------DGGYKEIVATIS 168
           GG     F  ++F MY+ Y++ + WK E+L+ +  D             GG     A IS
Sbjct: 195 GGDICQQFTREIFDMYQNYSSYKNWKFELLNYTPADYGSDLKPCGFVIVGGLHHAAARIS 254

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRID 225
           G  V+  +K+E GVHRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+RID
Sbjct: 255 GDNVYKHLKYEGGVHRVQRIPEVGLSARMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRID 314

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T RA G+GGQHVNTTDSAVR+ HIPTG++V    E+SQ +N+  A++VLRARLY    ++
Sbjct: 315 TFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEK 374

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINP 342
              ++ + RKLQ+G+  +SERIRTYNF+Q R+TDHRI   +  ++  L G   +D +I  
Sbjct: 375 DKCQQQSTRKLQVGTRAQSERIRTYNFTQDRVTDHRIAYEVRGIKEFLCGEKCLDQLIQR 434

Query: 343 LLTAHQAKMIGS 354
           LL +   + I  
Sbjct: 435 LLHSADEEAITE 446


>gi|156973278|ref|YP_001444185.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116]
 gi|156524872|gb|ABU69958.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116]
          Length = 260

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 99/260 (38%), Positives = 151/260 (58%), Gaps = 7/260 (2%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           + E   ++ +  +     D   C ++++AG+GG+EA  +   + RMY R+A  + +K EV
Sbjct: 1   MEEKLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEV 60

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           +  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++ GR HTS A+  + PE
Sbjct: 61  IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 210 AAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
             E  D+DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+ 
Sbjct: 121 IDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 268 RAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
           +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  +  
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVEN 237

Query: 326 YKLEYVLQGYIDDIINPLLT 345
              + VL G +D  I   L 
Sbjct: 238 RNTQAVLDGDLDKFIGASLK 257


>gi|158300562|ref|XP_320450.4| AGAP012078-PA [Anopheles gambiae str. PEST]
 gi|157013219|gb|EAA00316.4| AGAP012078-PA [Anopheles gambiae str. PEST]
          Length = 760

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 124/295 (42%), Positives = 177/295 (60%), Gaps = 4/295 (1%)

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L   + D   D  ++ L +          R     +N +L   D +D  S I+E+ AG G
Sbjct: 456 LQRELKDDKDDEMVQLLKEEREAYGSILFRLDSEILNGILSMDDEEDYGSLIMEVTAGVG 515

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  +LF MY  Y   + W+VE+L + + D GG +     ISG   +  +K E G
Sbjct: 516 GQEAMLFARELFDMYCGYVEYKGWEVEMLQTENTDIGGTRHATTVISGPDAYRYLKHEGG 575

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+PATE SGR+HTS  TV+++P   +  V++  +D++I+T RASG+GGQHVNTTD
Sbjct: 576 VHRVQRIPATEKSGRIHTSTVTVSIIPRPDDFQVELKEKDLKIETKRASGAGGQHVNTTD 635

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H+PTGI V   +E+SQ +NR  A + L A+L  +E +   +   A +K Q+G  
Sbjct: 636 SAVRIVHLPTGIAVECQTERSQQKNREIAKQKLTAKLMQIELEARFSSTQALKKSQVGQS 695

Query: 301 DRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQG--YIDDIINPLLTAHQAKMI 352
            R+E+IRTYNF+Q RITDHRI   T + L+  L+G   +DD+I  L  + + K +
Sbjct: 696 LRNEKIRTYNFNQDRITDHRIEGGTAHNLKGFLEGGEQLDDMIEKLRRSQRRKQL 750


>gi|13959455|sp|P57511|RF2_BUCAI RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 178/342 (52%), Gaps = 15/342 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAY---IKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K+R  EI+L +S   +        KL +E   ++ II  I+  ++  +E      + 
Sbjct: 28  NKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKEVVIFLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +   ++          ++I +   ++ +  +    +D   C ++I++G+GG++A 
Sbjct: 88  IETQDNLVFKESL-----LEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQSGSGGTDAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  + +  E++  S  +  G K     +SG   F   + E+G+HR+ 
Sbjct: 143 DWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIHRLI 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++  R HTS +++ + P+  E  D++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITH+PT I+    + +SQH+N+ +AMK ++++LY+++ ++   E+      K  I  G+ 
Sbjct: 263 ITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITWGN- 321

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
             +IR+Y     +I D R  +    ++ VL G +DD I   L
Sbjct: 322 --QIRSYILDNSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSL 361


>gi|319404230|emb|CBI77823.1| peptide chain release factor RF-2 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 317

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 161/318 (50%), Gaps = 13/318 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E   +   ++   ++ Q  +E  +L  +  + N    I +          +  +   
Sbjct: 1   MMRERQNLEDSMNSTQLFTQMLEECIELIAMGEEENDVEIITEAENTIRQLKSEIDK--- 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                  L     D     LE+ AG GG+E+  +   L RMY R+A   K KVE+L + D
Sbjct: 58  --KQIETLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILETHD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS A++ V P     I
Sbjct: 116 GEEAGIKSATILVKGYNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVVDENI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +VD+   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+N+  A  +
Sbjct: 176 EVDLSESDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNKATAWSM 235

Query: 273 LRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           LRARLY+ E K+     +A    K +IG G    +IR+Y     + + D R  +     +
Sbjct: 236 LRARLYEEELKKREEATNAVEAFKTEIGWG---HQIRSYVLQPYQLVKDLRTGVENADPQ 292

Query: 330 YVLQGYIDDIINPLLTAH 347
            VL G +D  I   L   
Sbjct: 293 TVLNGDLDTFIEAALAQR 310


>gi|329956010|ref|ZP_08296781.1| putative peptide chain release factor 2 [Bacteroides clarus YIT
           12056]
 gi|328524769|gb|EGF51823.1| putative peptide chain release factor 2 [Bacteroides clarus YIT
           12056]
          Length = 372

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 156/372 (41%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +   +                      D       +   +  + 
Sbjct: 1   MITIEQLKDIKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             IS Y++ K    +L      +  +    +            +  LE +          
Sbjct: 61  QWISGYNEVKVMADELQLAFDFYKDELVTEEEVDEAYAKASAAVEALELKNMLREEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ G K     
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKACTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           I+G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I    I  D
Sbjct: 177 IAGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEQARISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR  AM+ LR+ 
Sbjct: 237 TFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  +   L  
Sbjct: 354 KIDGFVKAYLME 365


>gi|303233066|ref|ZP_07319741.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
 gi|302480841|gb|EFL43926.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
          Length = 420

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 99/396 (25%), Positives = 168/396 (42%), Gaps = 54/396 (13%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           Q+  ++ + AE+E   ++        + ++  A ++ +    +          DL     
Sbjct: 24  QLDTMQTKIAELEAECAKEDFWGDPARASKTMATLTNLKQTQATMRDAHALLDDLVVAYE 83

Query: 68  DHNSDSEI-------------------------------------------------RDL 78
               + +                                                  +  
Sbjct: 84  FALDEMQNAALPVSGLDISHPHDAAASEATTSGEARSISHIPAASDAASPADTAAQAQSD 143

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E     K +  L +E+       D  D    I+ I+ G GG EA  +   L +MY +
Sbjct: 144 MMREAQHTYKTLTGLLDELELNRWFCDPYDQGDAIVTIKPGQGGLEAQDWCAMLLKMYCK 203

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           Y   + W+V +      +  G      T+ G   +  +K E+GVHR+ R+  T+A  R  
Sbjct: 204 YCERKSWRVTINDCPQAEVIGIDRATFTVHGVRAYGMLKAEAGVHRLVRISPTDAKHRRQ 263

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           T+ A V V+P    E DV+I  +D+R+D   ASG GGQ VNTTDSAVR+TH+P+GI+V  
Sbjct: 264 TTFAGVEVIPVLPEETDVEINPQDVRVDVFHASGPGGQGVNTTDSAVRLTHMPSGIVVSC 323

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN-FSQGR 315
            +E+SQ QN+  AM++L+ARLY+++R++ A + +   K    +     +IR Y  +    
Sbjct: 324 QNERSQLQNKAAAMEILKARLYELQRQQRATQLNDL-KGLTTTISWGNQIRNYILYPFQL 382

Query: 316 ITDHRINLTLYKLEYVL-QGYIDDIINPLLTAHQAK 350
           + D R  +    ++ VL +G +D  I   L   Q +
Sbjct: 383 VKDTRTQVETGNVDAVLQEGNLDPFIIAYLRWKQEQ 418


>gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54]
 gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila
           LSv54]
          Length = 285

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 101/288 (35%), Positives = 156/288 (54%), Gaps = 9/288 (3%)

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L  +  +       +++A                 I    +     D  + I+ I AG G
Sbjct: 2   LLEMAAEEGDQEIEQEIALKLGSFANALAA-----IELECMFIGEHDSCNAIISIHAGAG 56

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G+EA  +   L RMY R+A   K+K E+L     D+ G K I   I G+  +  ++ E G
Sbjct: 57  GTEAQDWTDILLRMYLRWAERHKFKTEILDLLPGDEAGTKSITILIKGQWAYGYLRSELG 116

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           +HR+ R+   + SGR HTS A+V V+PE    +DVDI  +D+R+DT RASG+GGQHVN T
Sbjct: 117 IHRLVRISPFDTSGRRHTSFASVMVMPELDNTVDVDIDEKDLRVDTYRASGAGGQHVNKT 176

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSA+R+TH+PTG++V   +E+SQH+N+  AMK+L A++Y +E+++ A+++      + G 
Sbjct: 177 DSAIRLTHLPTGVVVQCQNERSQHRNKEMAMKMLIAQIYQLEKQKKADQQEGLHGEKKG- 235

Query: 300 GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                +IR+Y     R I DHR +     ++ VL G +D  I   L  
Sbjct: 236 ISWGSQIRSYVLQPYRLIKDHRTDFEAGNVDAVLDGGLDGFIKAFLLW 283


>gi|149277162|ref|ZP_01883304.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39]
 gi|149232039|gb|EDM37416.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39]
          Length = 324

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/325 (24%), Positives = 148/325 (45%), Gaps = 8/325 (2%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84
           +    D   K  +  AAI+        +     + +D   +     +     +  Q +  
Sbjct: 4   QPGFWDDPKKAEKHLAAINSKKVWTDAWQVVNAKLEDTEVMFDFLQAGDATAEEMQEQYD 63

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRK 144
                I  LE       +    +D    +++I AG GG+E+  +   L RMY  +     
Sbjct: 64  ECLALIEALEL----KNMLSSKEDQLHAVMQITAGAGGTESCDWAAMLMRMYIMWGEKNG 119

Query: 145 WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATV 204
           +KV      + +  G K +    +G   +  +K E+GVHR+ R+   +++ R HTS A+V
Sbjct: 120 YKVTEQDYQEGEVAGVKSVTLQFAGDFSYGYLKGENGVHRLVRISPFDSNARRHTSFASV 179

Query: 205 AVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQ 262
            V P     I++++   +I  +T R+ G+GGQ+VN  ++AVR+ H P+GI++     +SQ
Sbjct: 180 YVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIVIKNQESRSQ 239

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRI 321
            QN+  AM++L+++LY+ E ++     +A    +    +   +IR Y     + + D R 
Sbjct: 240 LQNKENAMRLLKSQLYEAEMRKRMEATAAIEGSK-KKIEWGSQIRNYVLHPYKLVKDLRT 298

Query: 322 NLTLYKLEYVLQGYIDDIINPLLTA 346
           N      + VL G +++ +   L  
Sbjct: 299 NYETSNAQGVLDGELNEFLKAYLME 323


>gi|255004320|ref|ZP_05279121.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Virginia]
          Length = 255

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 101/258 (39%), Positives = 145/258 (56%), Gaps = 11/258 (4%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA-ALRKWKVEVLSSSDNDDGGY 160
           +     D   C L IR G GG+E+  +   L RMY R+A     +  E++   D +  G 
Sbjct: 1   MFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRWAGTFHGFTTEIVDKIDGEAAGL 60

Query: 161 KEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPL 219
           K +   ISG G +   K ESGVHR+ R+   ++S R HTS A+V V P A +  D++I  
Sbjct: 61  KSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHTSFASVEVSPIADDKIDIEILE 120

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY 278
           +D+RIDT RASG+GGQHVN T+SAVRITH+P+GI+V   + +SQHQNR  A  +LR+RLY
Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQTSRSQHQNRAEAYSLLRSRLY 180

Query: 279 DVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           ++E +    + +   + +  IG G    +IR+Y     R + D R       ++ VL G 
Sbjct: 181 EMELQEKEKKMAQEHDSRCDIGWG---HQIRSYVMHPYRMVKDLRTGHETGDVDAVLDGD 237

Query: 336 IDDIINPLLTAH--QAKM 351
           +D  I   LT    QA+ 
Sbjct: 238 LDKFIAAALTYKLSQAQK 255


>gi|156744082|ref|YP_001434211.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941]
 gi|156235410|gb|ABU60193.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941]
          Length = 317

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 151/316 (47%), Gaps = 12/316 (3%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +    +   + +I   D++     DL  +      DS   D+A        +       
Sbjct: 1   MQRLTRLKEEVERIEALDRQLTALADLIDLAAAEEDDSLQADIAAELERTRREIEA---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +   +L     DD+   L I+AG GG++A  +   L RMY R+   R ++V ++  SD 
Sbjct: 57  -LEIEVLLSGPYDDRDAFLSIKAGMGGTDAQDWAEMLLRMYMRWGERRGFQVALIDQSDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-ID 214
           ++ G K     + G   +   K E+GVHR+ R+    A     TS A V VLPE  +  +
Sbjct: 116 EEAGIKSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG----IMVTSSEKSQHQNRLRAM 270
           V I  EDIR+D  RASG GGQ VNTTDSAVRIT+ P      ++   +E+SQ QNR  AM
Sbjct: 176 VVIRPEDIRVDVFRASGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAM 235

Query: 271 KVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLE 329
           +VLR RL + E +R   ER+  R  +    D   ++RTY       + DHR +     ++
Sbjct: 236 RVLRGRLLERELQRKREERARLR-GEYRQADFGNQMRTYYLHPYTLVKDHRTDYETSDVQ 294

Query: 330 YVLQGYIDDIINPLLT 345
            VL G ID  I   L 
Sbjct: 295 AVLDGDIDPFIEAYLR 310


>gi|281421022|ref|ZP_06252021.1| peptide chain release factor 2 [Prevotella copri DSM 18205]
 gi|281404940|gb|EFB35620.1| peptide chain release factor 2 [Prevotella copri DSM 18205]
          Length = 375

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 20/351 (5%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I   K  F E +LR       +      E+   +  I   +  Y   +    +L      
Sbjct: 23  IDQKKVEFEEEQLRTQAPDFWEDPKYAQEQMKKVKGIQKWLDGYKTVRLYADELQLAFDF 82

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           +  +    +    +     K I +LE       + +  +D   C+L+I +G GG+E+  +
Sbjct: 83  YKDEMVTEEEVDADYAKAIKAIEDLEL----KNMLRQKEDPMDCVLKINSGAGGTESQDW 138

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG-RGVFSRMKFESGVHRVQR 187
              L RMY R++    +KV +    + D+ G K +  TI G    +  +K E+GVHR+ R
Sbjct: 139 AQMLMRMYMRWSEAHGYKVTITDMQEGDEAGIKSVTMTIEGGEYAYGYLKSENGVHRLVR 198

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRI 246
           V    A G+  TS A+V V P   +          +  DT R+SG+GGQ+VN  +S VR+
Sbjct: 199 VSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNVNKVESGVRL 258

Query: 247 THIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KL 295
            +  T          ++  +  + Q +NR +A+ +L+++LYD   K+    ++     K 
Sbjct: 259 RYWYTDPDTGEEEEILIENTETRDQPKNRAKALLLLKSQLYDRAMKKRLEAKAKIEAGKK 318

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +I  G    +IR+Y F   R+ DHR N     ++ V+ G IDD I   L  
Sbjct: 319 KIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLME 366


>gi|313764090|gb|EFS35454.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA1]
 gi|314914951|gb|EFS78782.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA4]
          Length = 370

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 11/326 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E + +     D         + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  EAKKAEIADLERQGAVPNLWDDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  N-SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E    A  E + + +EI  LE       L     D++  ++ IR+  GG +AA F
Sbjct: 90  AADDKESLAEATTETVKLREEIDALEV----RTLLSGQYDEREAVVTIRSEAGGVDAADF 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+
Sbjct: 146 AEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+T
Sbjct: 206 SPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLT 265

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++
Sbjct: 266 HLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QM 322

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYV 331
           R+Y     + + D R N  +   + V
Sbjct: 323 RSYVLHPYQMVKDLRTNHEVGNTDAV 348


>gi|330686486|gb|EGG98080.1| putative peptide chain release factor 2 [Staphylococcus epidermidis
           VCU121]
          Length = 271

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 98/259 (37%), Positives = 145/259 (55%), Gaps = 9/259 (3%)

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
           +     LL     D  + ILE+  G GG+E+  +V  L RMY+RY     +KVE +    
Sbjct: 13  DHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQSGFKVETVDYLP 72

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS A+  V+P+     
Sbjct: 73  GDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFDNDE 132

Query: 214 -DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
            +++I  +DI +DT RASG+GGQH+N T+SA+RITH PTGI+V   +E+SQ +NR  AMK
Sbjct: 133 IEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMK 192

Query: 272 VLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKL 328
           +L+++LY ++ +    E +  R  Q  IG G    +IR+Y F     + DHR N    K+
Sbjct: 193 MLKSKLYQLKLEEQEREMAEIRGEQKEIGWG---SQIRSYVFHPYSMVKDHRTNEETGKV 249

Query: 329 EYVLQGYIDDIINPLLTAH 347
           + V+ G I   I   L   
Sbjct: 250 DAVMDGDIGPFIEAYLRHQ 268


>gi|254526132|ref|ZP_05138184.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537556|gb|EEE40009.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9202]
          Length = 354

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 94/339 (27%), Positives = 175/339 (51%), Gaps = 6/339 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           LK +  E+E   ++    +   +  ++   +  + +++ + D+ K    D +  +  ++ 
Sbjct: 11  LKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSL 70

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + E  +   +E     K++RE  ++  +  L     D +  ++ I AG GG++A  +V  
Sbjct: 71  EPE--EEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEI 128

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A   +  + +   S  ++ G K +   I G+  +  ++ E G HR+ R+   
Sbjct: 129 LLRMYSRWADNNQMTLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPF 188

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+G+  TS A V V+P+    I +DIP +D+ I T R+ G+GGQ+VN  ++AVRI H+P
Sbjct: 189 NANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLP 248

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           +GI V  + E+SQ QN+ +AM +L+++L  + +++ A E +   K  I       +IR Y
Sbjct: 249 SGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNY 307

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            F   + + D R       L+ VL G ++  I+ LL  +
Sbjct: 308 VFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRMN 346


>gi|157412537|ref|YP_001483403.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9215]
 gi|157387112|gb|ABV49817.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9215]
          Length = 354

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 94/339 (27%), Positives = 175/339 (51%), Gaps = 6/339 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           LK +  E+E   ++    +   +  ++   +  + +++ + D+ K    D +  +  ++ 
Sbjct: 11  LKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSL 70

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + E  +   +E     K++RE  ++  +  L     D +  ++ I AG GG++A  +V  
Sbjct: 71  EPE--EEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEI 128

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A   +  + +   S  ++ G K +   I G+  +  ++ E G HR+ R+   
Sbjct: 129 LLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPF 188

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+G+  TS A V V+P+    I +DIP +D+ I T R+ G+GGQ+VN  ++AVRI H+P
Sbjct: 189 NANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLP 248

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           +GI V  + E+SQ QN+ +AM +L+++L  + +++ A E +   K  I       +IR Y
Sbjct: 249 SGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNY 307

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            F   + + D R       L+ VL G ++  I+ LL  +
Sbjct: 308 VFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRMN 346


>gi|148260683|ref|YP_001234810.1| peptide chain release factor 2 [Acidiphilium cryptum JF-5]
 gi|326403877|ref|YP_004283959.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
 gi|146402364|gb|ABQ30891.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
           cryptum JF-5]
 gi|325050739|dbj|BAJ81077.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
          Length = 323

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 13/316 (4%)

Query: 37  EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENE 96
            E   ++     +   +++ ++   L  +       S + +         E+        
Sbjct: 3   RERNRLATQTEAVHTIERETEDALTLAELAEAEGDQSVLAEAEAALRRISEEA-----KR 57

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
                L     D   C LE+ AG GG+EA  +   L RMY R+A    +KV +L  S+ +
Sbjct: 58  REIESLLAGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMLEESEGE 117

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDV 215
             G K     +SG   +  +K E+GVHR+ R+   +A+ R  TS A+V V P     I+V
Sbjct: 118 QAGIKSATIQVSGMNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVVDDSIEV 177

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           +I   D+++DT RASG+GGQHVN T+SA+RITH+P+GI+V   +++SQH+NR  AM++L+
Sbjct: 178 EINPADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQNDRSQHRNRATAMEMLK 237

Query: 275 ARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYV 331
           +RLY++E ++   A   S + K  IG G    +IR+Y  +  + + D R N      + V
Sbjct: 238 SRLYEMELQKREEAAAASESAKRDIGWG---HQIRSYVLAPYQLVKDLRTNFESGNPDAV 294

Query: 332 LQGYIDDIINPLLTAH 347
           L G +D  +   L + 
Sbjct: 295 LNGDLDAFMAASLASR 310


>gi|239831796|ref|ZP_04680125.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
 gi|239824063|gb|EEQ95631.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
          Length = 321

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 109/317 (34%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ I+   Q   +  +L  +  + N  S I+D         E+      +
Sbjct: 1   MRERQQLEDSINGINHLTQTLNDSIELIAMGEEENDKSIIQDAENTIRELKEEI-----D 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     D     +E+ AG GG+E+  +   L RMY R+A     KVEV+   + 
Sbjct: 56  RRQIDMLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  MK ESGVHR+ R+   +++ R HTS A++ V P     ID
Sbjct: 116 EEAGIKSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V +   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR +A  +L
Sbjct: 176 VQVTEADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+      A    K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEEELKKREAATDAANATKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTNPQE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +   +   L   
Sbjct: 293 VLDGSVTPFMEAALAHR 309


>gi|145635061|ref|ZP_01790767.1| peptide chain release factor 2 [Haemophilus influenzae PittAA]
 gi|148826180|ref|YP_001290933.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittEE]
 gi|145267669|gb|EDK07667.1| peptide chain release factor 2 [Haemophilus influenzae PittAA]
 gi|148716340|gb|ABQ98550.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittEE]
          Length = 248

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 92/249 (36%), Positives = 142/249 (57%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K
Sbjct: 1   MFSGKHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                +SG   F  ++ E+G+HR+ R    +++ R HTS +   V PE  +         
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITH+P+GI+V   +++SQH+N+ +AMK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LELQKKNADKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 RFIEASLKA 246


>gi|319776546|ref|YP_004139034.1| peptide chain release factor 2 [Haemophilus influenzae F3047]
 gi|317451137|emb|CBY87370.1| peptide chain release factor 2 [Haemophilus influenzae F3047]
          Length = 248

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 92/249 (36%), Positives = 143/249 (57%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K
Sbjct: 1   MFSGEHDACNCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                +SG   F  ++ E+G+HR+ R    +++ R HTS +   V PE  +         
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITH+P+GI+V   +++SQH+N+ +AMK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LELQKKNADKQVMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 RFIEASLKA 246


>gi|68486191|ref|XP_709944.1| hypothetical protein CaO19.1303 [Candida albicans SC5314]
 gi|46434441|gb|EAK93850.1| hypothetical protein CaO19.1303 [Candida albicans SC5314]
 gi|238881487|gb|EEQ45125.1| peptide chain release factor 1, mitochondrial precursor [Candida
           albicans WO-1]
          Length = 394

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 126/350 (36%), Positives = 197/350 (56%), Gaps = 17/350 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   ++    E+  ++++    D  +K    +   + I+S     +   QE  +L  + 
Sbjct: 52  QRAQTIQQEHKELSEKLADKYIPDLQVK----FDNYTNILSMFDKLETLTQEYIELTEIT 107

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D +   E ++  +  V     +I +L +E+   L P     DK CI+E+R G GG+EA+
Sbjct: 108 DDPDLYKEAQEELKSIV---IPQIEKLVSELRVKLRPPVKYADKGCIIELRPGVGGNEAS 164

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF GDL  MY  +A+   WK +++S   N  G   E + +I   G +  M+ ESGVHRVQ
Sbjct: 165 LFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQ 224

Query: 187 RVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           R+P TE  GRVHTS A V VLP+          + +      ++RIDTMRA G GGQHVN
Sbjct: 225 RIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVN 284

Query: 239 TTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVR+ HIPTG+ ++   E+SQ  N+ +A  +LR+RL   E++    ++   R  Q+
Sbjct: 285 TTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQV 344

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTA 346
            S DRS++I+TYN+ + R+TDHRIN +++ LE VL+G  +  +I+   + 
Sbjct: 345 SSTDRSDKIKTYNYKENRVTDHRINYSMHDLEGVLEGRKLGQLIDVYRSQ 394


>gi|302759755|ref|XP_002963300.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
 gi|300168568|gb|EFJ35171.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
          Length = 509

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 149/294 (50%), Positives = 204/294 (69%), Gaps = 10/294 (3%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           I     K++E   L  ++ +   D E+R LA  E+    +E+R+ ++++   L+PKD  D
Sbjct: 2   IKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEAD 61

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
            +        G GG EA++F  DLF+MY++YAA   W+ EVLS +  D  GYKE  A IS
Sbjct: 62  SR--------GAGGDEASIFASDLFKMYDKYAANNSWRFEVLSITTTDTRGYKEASAAIS 113

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMR 228
           G GV+  +KFESGVHRVQRVP TE +GR+HTS A+VA+LPEA EIDV+I  ++I+IDT R
Sbjct: 114 GDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANEIDVEIRNDEIKIDTYR 173

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           A G+GGQHVNTT SAVR+TH PTGI+V    E+SQH+N+ +A+ +L ARLY++ER R   
Sbjct: 174 AGGAGGQHVNTTCSAVRVTHTPTGIVVAIQDERSQHKNKAKALSILYARLYELERSRAVA 233

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDII 340
            RS  R+ QIGS DRSERIRTYNF QGR+TDHR+ +T + +E +++G  +D+ I
Sbjct: 234 SRSELRQDQIGSSDRSERIRTYNFPQGRVTDHRVGVTQHAIEQIMEGIDVDNWI 287


>gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
 gi|238686699|sp|A7I0P7|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
          Length = 364

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 182/343 (53%), Gaps = 12/343 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH-- 69
           L  R AEIE    +        K  +     + I + ++ + + + E  D          
Sbjct: 29  LMTRLAEIEKTEQDPALWVDAKKAAQIGREKTKISNILAKFKKAQNELNDAKEFYELAVS 88

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            +D E  +    E   + + I  LE  +         +DDK+ I+ I  G GG+E   + 
Sbjct: 89  ENDGETINELFRESAKLSENIANLELSMM----LSGENDDKNAIINIHPGAGGTEGEDWA 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
           G L+RMY R+     +K+E+L   + D+ G K++   + G   +  +K ESG+HR+ R+ 
Sbjct: 145 GMLYRMYVRFCERVGYKIEILDFQEGDEAGIKDVNFIVKGENAYGYLKVESGIHRLVRIS 204

Query: 190 ATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +++GR HTS A+V V PE   +I ++I  +D+RID  R+SG+GGQHVN T+SAVRITH
Sbjct: 205 PFDSAGRRHTSFASVVVSPELDDDIQINIDEKDLRIDYYRSSGAGGQHVNKTESAVRITH 264

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IPT I+V   +++ QH+N+  AMKVL++RLY++E+ +   E +   K  I  G    +IR
Sbjct: 265 IPTNIVVQCQNDRDQHKNKASAMKVLKSRLYELEKLKKQEESNKTPKSDIAWG---YQIR 321

Query: 308 TYN-FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            Y  F   ++ D R N+   + E +L G I  I+  +L  +Q+
Sbjct: 322 NYVLFPYQQVKDLRSNIAYSQAEAILDGDIKKILEDVLINNQS 364


>gi|153207868|ref|ZP_01946445.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177']
 gi|165918820|ref|ZP_02218906.1| peptide chain release factor 2 [Coxiella burnetii RSA 334]
 gi|212219147|ref|YP_002305934.1| peptide chain release factor 2 [Coxiella burnetii CbuK_Q154]
 gi|120576294|gb|EAX32918.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177']
 gi|165917452|gb|EDR36056.1| peptide chain release factor 2 [Coxiella burnetii RSA 334]
 gi|212013409|gb|ACJ20789.1| bacterial peptide chain release factor 2 [Coxiella burnetii
           CbuK_Q154]
          Length = 289

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 92/278 (33%), Positives = 148/278 (53%), Gaps = 7/278 (2%)

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E       ++    K++ +   E+ +  +     D  +  L+I+AG+GG+EA  +   L
Sbjct: 7   QEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQDWAEML 66

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+     +   ++ +S  +  G K      +G   +  ++ E+GVHR+ R    +
Sbjct: 67  LRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLVRKSPFD 126

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +  R HTS A+V V PE  +         ++RIDT RASG+GGQHVN TDSAVRITH+P+
Sbjct: 127 SGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVRITHLPS 186

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRT 308
           GI+V   +++SQH+N+ +AMK LRA+LY++E  +   +++     K +I  G+   +IR+
Sbjct: 187 GIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGN---QIRS 243

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y     R+ D R  +     + VL G ID  I   L  
Sbjct: 244 YVLDASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281


>gi|224536533|ref|ZP_03677072.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521789|gb|EEF90894.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 371

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 98/372 (26%), Positives = 160/372 (43%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEI--------------ELRM--SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+  +K R   +              E ++        D       +   +  + 
Sbjct: 1   MITIEQLKSIKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKTAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             I+ Y++ K    +L      +  +    +            I ELE +          
Sbjct: 61  QWIAGYNEIKTLSDELQLAFDFYKDELVTEEEIDEAYAKASVAIDELELKNMLRDEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ G K     
Sbjct: 121 D----CVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKAVISNLQEGDEAGIKTCTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           ISG   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I + +I  D
Sbjct: 177 ISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR  AM+ LR+ 
Sbjct: 237 TFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|167855181|ref|ZP_02477952.1| peptide chain release factor 2 [Haemophilus parasuis 29755]
 gi|219871045|ref|YP_002475420.1| peptide chain release factor 2 [Haemophilus parasuis SH0165]
 gi|167853726|gb|EDS24969.1| peptide chain release factor 2 [Haemophilus parasuis 29755]
 gi|219691249|gb|ACL32472.1| peptide chain release factor 2 [Haemophilus parasuis SH0165]
          Length = 248

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 97/249 (38%), Positives = 143/249 (57%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
                +SG   F  ++ E+G+HR+ R    +++ R HTS A   V PE   + D++I   
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDFDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITH+P+GI+V   + +SQHQN+ +AMK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E  +   E+      K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 MEMMKKNAEKQAMEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 KFIEASLKA 246


>gi|328752610|gb|EGF66226.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA2]
          Length = 370

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 11/326 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
              K   A++E +++               + +S + ++I   ++ +   +D+H ++   
Sbjct: 30  EAKKAEIADLERQVAVPNLWGDQENAQRVTSRLSALQAEIERLERLRARIEDVHVLLEFA 89

Query: 70  N-SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              D E    A  E + + +EI  LE       L     D++  ++ IR+  GG +AA F
Sbjct: 90  AADDKESLAEATTETVKLREEIDALEV----RTLLSGQYDEREAVVTIRSEAGGVDAADF 145

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R++    +KVE+L +S  ++ G K     +     +  +  E G HR+ R+
Sbjct: 146 AEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRI 205

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNTTDSAVR+T
Sbjct: 206 SPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLT 265

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +      G    ++
Sbjct: 266 HLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNSWGA---QM 322

Query: 307 RTYNFSQGR-ITDHRINLTLYKLEYV 331
           R+Y     + + D R N  +   + V
Sbjct: 323 RSYVLHPYQMVKDLRTNHEVGNTDAV 348


>gi|258544156|ref|ZP_05704390.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826]
 gi|258520598|gb|EEV89457.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826]
          Length = 250

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 93/249 (37%), Positives = 138/249 (55%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+   R +K E++  S  D  G K
Sbjct: 1   MFSGELDPNNAFLDIQAGSGGTEAQDWASMLLRMYLRWGEARGFKTELIEESPGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                 +G   +  ++ E GVHR+ R    ++  R HTS A V V PE  +  +++I   
Sbjct: 61  SATIEFTGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFAAVFVSPEIDDNIEIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+R+D  RASG+GGQHVN T+SAVRITH+PT I+V + + +SQH+NR   MK LRA+LY+
Sbjct: 121 DLRVDVYRASGAGGQHVNRTESAVRITHLPTNIVVQSQNSRSQHENRSTCMKQLRAKLYE 180

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E  + +   +   + K  IG G+   +IR+Y   Q RI D R        + VL G +D
Sbjct: 181 LELSKRSASAQAIEDSKSDIGWGN---QIRSYVLDQSRIKDLRTGYETSNTQAVLDGGLD 237

Query: 338 DIINPLLTA 346
             +   L  
Sbjct: 238 PFLQASLKQ 246


>gi|145631266|ref|ZP_01787039.1| peptide chain release factor 2 [Haemophilus influenzae R3021]
 gi|145633057|ref|ZP_01788789.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 3655]
 gi|145637033|ref|ZP_01792696.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittHH]
 gi|145639267|ref|ZP_01794873.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittII]
 gi|145641183|ref|ZP_01796763.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae R3021]
 gi|148828361|ref|YP_001293114.1| peptide chain release factor 2 [Haemophilus influenzae PittGG]
 gi|229844833|ref|ZP_04464971.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1]
 gi|229846242|ref|ZP_04466354.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1]
 gi|319897322|ref|YP_004135518.1| peptide chain release factor 2 [Haemophilus influenzae F3031]
 gi|144983193|gb|EDJ90688.1| peptide chain release factor 2 [Haemophilus influenzae R3021]
 gi|144986283|gb|EDJ92862.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 3655]
 gi|145269687|gb|EDK09627.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittHH]
 gi|145271570|gb|EDK11481.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittII]
 gi|145274020|gb|EDK13886.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 22.4-21]
 gi|148719603|gb|ABR00731.1| peptide chain release factor 2 [Haemophilus influenzae PittGG]
 gi|229811246|gb|EEP46963.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1]
 gi|229812214|gb|EEP47905.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1]
 gi|317432827|emb|CBY81192.1| peptide chain release factor 2 [Haemophilus influenzae F3031]
          Length = 248

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 92/249 (36%), Positives = 142/249 (57%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K
Sbjct: 1   MFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE- 220
                +SG   F  ++ E+G+HR+ R    +++ R HTS +   V PE  +         
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITH+P+GI+V   +++SQH+N+ +AMK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LELQKKNADKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 RFIEASLKA 246


>gi|282856730|ref|ZP_06265994.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
 gi|282585426|gb|EFB90730.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
          Length = 252

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 95/253 (37%), Positives = 142/253 (56%), Gaps = 4/253 (1%)

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
             LL     D  S IL + AG+GG ++  +   L+RMY R+   R++K ++L    +++ 
Sbjct: 1   MALLLSGPYDHCSAILSVHAGSGGLDSQDWAEMLYRMYLRWCEERRFKTKLLDYQHDEEA 60

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDI 217
           G K     I G   +  ++ E GVHR+ R+   + + R HTS A+V V P+   ++DV+I
Sbjct: 61  GIKSATLLIQGETAYGYLRSEIGVHRLVRISPFDTNKRRHTSFASVDVSPQLPDDVDVEI 120

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             ED+RIDT R+SG+GGQHVN TDSAVRITH+PTGI+V   +E+SQH N+  AM VL+++
Sbjct: 121 APEDLRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVVSCQNERSQHMNKATAMSVLKSK 180

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY 335
           LY  E ++   E +A    +  S     +IR+Y       + DHR       +  VL G 
Sbjct: 181 LYQRELEQRQAEMNALAGEKKES-TWGSQIRSYVLQPYTLVKDHRTGEETGNVGGVLDGG 239

Query: 336 IDDIINPLLTAHQ 348
           +D  I   L   +
Sbjct: 240 LDPFILAYLRWAR 252


>gi|158521778|ref|YP_001529648.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3]
 gi|158510604|gb|ABW67571.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3]
          Length = 337

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 169/339 (49%), Gaps = 10/339 (2%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++ R AEIE  ++   + D   +        S +  ++ +  +  +E +D   ++     
Sbjct: 1   MRERLAEIEALVAREGAWDDPERAATLLKERSLLSDRLDLLSELGREVEDAEVLLELAEE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           +++    A++         +    +++  L   D DD    I+ I AG GG++A  +   
Sbjct: 61  EADSDAAAEVTRRVEGVRKKI--EKLSIDLTLSDEDDPADAIVAINAGAGGTDAQDWAEM 118

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           LFRMY R+   + +K+E++     D+ G K    +  G   F  +K ESGVHR+ R+   
Sbjct: 119 LFRMYTRWIERKGYKLEMIDHQPGDEAGIKSATFSAKGLNAFGYLKNESGVHRLVRISPF 178

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            ASG+  TS A+V V P+          E D+RIDT RASG+GGQHVN T SAVRITH P
Sbjct: 179 NASGKRQTSFASVFVFPQIDRQIDIDIDEKDLRIDTFRASGAGGQHVNKTSSAVRITHYP 238

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIR 307
           +G++V    E+SQ +NR  AM VLRARLY +E+ +   +       K  I  G    +IR
Sbjct: 239 SGVVVQCQQERSQLRNREIAMAVLRARLYKLEKDKQNQKLQDMEAGKDDIAWG---SQIR 295

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           +Y     +   DHR +  +  +  VL G ID  I  +L 
Sbjct: 296 SYFLHPYQKAKDHRTDFEIGDVYSVLDGEIDPFIEAVLM 334


>gi|87120696|ref|ZP_01076589.1| peptide chain release factor 2, programmed frameshift [Marinomonas
           sp. MED121]
 gi|86163924|gb|EAQ65196.1| peptide chain release factor 2, programmed frameshift [Marinomonas
           sp. MED121]
          Length = 293

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 102/298 (34%), Positives = 158/298 (53%), Gaps = 12/298 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           +    + ++L  +  + + +  +  +         +E+    +++ +  +     D  + 
Sbjct: 2   ESGLVDAKELLDMAVEEDDEDSVEAVTME-----LEELEAQLSKLEFRRMFSQEMDPTNA 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            L+I+AG+GG+EA  +   L RMY R+   + +KVE++  S  D  G K       G   
Sbjct: 57  FLDIQAGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSAGDVAGIKSATIRFEGEYA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASG 231
           F  ++ E+GVHR+ R    ++  R HTS A+V + PE  +  ++DI   D+R DT R+SG
Sbjct: 117 FGWLRTETGVHRLVRKSPFDSGSRRHTSFASVFLSPEIDDNVEIDINPADLRTDTYRSSG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANE 288
           +GGQHVNTTDSAVRITHIPTGI+V   +++SQH NR  AMK LRA+LY+ E ++   A +
Sbjct: 177 AGGQHVNTTDSAVRITHIPTGIVVQCQNQRSQHANRDFAMKQLRAKLYEFEMQKRTEAAQ 236

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              + K  IG G    +IR+Y     RI D R  +       VL G +D  I   L  
Sbjct: 237 AVEDTKSDIGWG---SQIRSYVLDSSRIKDLRTGVESSNTGAVLDGNLDQFIVASLKQ 291


>gi|253571104|ref|ZP_04848511.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
 gi|251839057|gb|EES67141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
          Length = 354

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 19/351 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I   K +  E +LR       D   K   +   +  +   I  Y++ K    +L     
Sbjct: 5   DIDGKKIQVEEEQLRTQAPGFWDDQKKAEAQMKLVKDLQKWIDGYNEVKTLADELELSFD 64

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  +               + +  LE       + +D  D  +C+L+I +G GG+E+  
Sbjct: 65  FYKEELVTEGDVDAAYAKASEAVEALEL----KNMLRDEADQMACVLKINSGAGGTESQD 120

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY RYA    +K  + +  + D+ G K     I G   +  +K E+GVHR+ R
Sbjct: 121 WASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVR 180

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDI-RIDTMRASGSGGQHVNTTDSAVRI 246
           V    A G+  TS A+V V P   +      L      DT R+ G+GGQ+VN  +S VR+
Sbjct: 181 VSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRL 240

Query: 247 THIPTG---------IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KL 295
            +             ++  +  + Q +NR  AM+ LR+ LYD E +    E++     K 
Sbjct: 241 RYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKK 300

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +I  G    +IR+Y F   R+ DHR N     +  V+ G I++ I   L  
Sbjct: 301 KIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVNGVMDGKIEEFIKAYLME 348


>gi|212213085|ref|YP_002304021.1| peptide chain release factor 2 [Coxiella burnetii CbuG_Q212]
 gi|212011495|gb|ACJ18876.1| bacterial peptide chain release factor 2 [Coxiella burnetii
           CbuG_Q212]
          Length = 289

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 92/278 (33%), Positives = 148/278 (53%), Gaps = 7/278 (2%)

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E       ++    K++ +   E+ +  +     D  +  L+I+AG+GG+EA  +   L
Sbjct: 7   QEKDTDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQDWAEML 66

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+     +   ++ +S  +  G K      +G   +  ++ E+GVHR+ R    +
Sbjct: 67  LRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLVRKSPFD 126

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +  R HTS A+V V PE  +         ++RIDT RASG+GGQHVN TDSAVRITH+P+
Sbjct: 127 SGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVRITHLPS 186

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRT 308
           GI+V   +++SQH+N+ +AMK LRA+LY++E  +   +++     K +I  G+   +IR+
Sbjct: 187 GIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGN---QIRS 243

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y     R+ D R  +     + VL G ID  I   L  
Sbjct: 244 YVLDASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281


>gi|258645336|ref|ZP_05732805.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
 gi|260402685|gb|EEW96232.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
          Length = 330

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 90/332 (27%), Positives = 169/332 (50%), Gaps = 12/332 (3%)

Query: 23  MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           MS+    +      +++++           +    + +  ++L  +  + N         
Sbjct: 1   MSDPSFWENGDHAKEISQKATEAKAAYDTYTRLFARAESIKELLDMAIEEND-----QDM 55

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + E+     E++++ ++    LL  D  D    I+   AG GG+EA  +   L RMY ++
Sbjct: 56  EGELEEEINELKDILDKKEIELLLNDEYDANDAIITFHAGAGGTEAQDWTEMLIRMYIKW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A    + +E L+    D+ G K     + G+  +  +K E GVHR+ R+   +A+ R HT
Sbjct: 116 AESEGFVLEELNMLPGDEAGVKSAEYMVRGKFAYGLLKSEKGVHRLVRISPFDAAKRRHT 175

Query: 200 SAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTS 257
           S + V V+PE   +I++D+ + D+R+D  RASG+GGQH+N T SAVR+THIPTGI+    
Sbjct: 176 SFSAVDVMPEIGDDIEIDLNMADVRVDYYRASGAGGQHINKTSSAVRMTHIPTGIVAACQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +E+SQ QN+ + +++L+A+L+++E ++    +      Q    +   +IR+Y F     +
Sbjct: 236 NERSQFQNKEQCLRLLKAKLFELEMQKREQVKKGIEGEQQA-IEWGSQIRSYVFQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
            D+R  +    ++ V+ G ++  I   L   +
Sbjct: 295 KDNRTGIETGNIQSVMDGGLNPFIEGFLKHKK 326


>gi|153009595|ref|YP_001370810.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188]
 gi|151561483|gb|ABS14981.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188]
          Length = 321

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 107/317 (33%), Positives = 159/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ I+   Q   +  +L  +  + +  S I+D         ++      +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSIELIAMGEEEDDKSIIQDAENTIRELKQEI-----D 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     D     +E+ AG GG+E+  +   L RMY R+A     KVEV+   + 
Sbjct: 56  RRQIDMLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  MK ESGVHR+ R+   +++ R HTS A++ V P     ID
Sbjct: 116 EEAGIKSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V +   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR +A  +L
Sbjct: 176 VQVTEADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+      A    K +IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEEELKKREAATDAANATKTEIGWG---HQIRSYVLQPYQLVKDLRTGVESTNPQE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +   +   L   
Sbjct: 293 VLDGSVTPFMEAALAHR 309


>gi|297520245|ref|ZP_06938631.1| peptide chain release factor 2 [Escherichia coli OP50]
          Length = 248

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 99/249 (39%), Positives = 148/249 (59%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C L+I+AG+GG+EA  +   L RMY R+A  R +K E++  S+ +  G K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLE 220
            +   ISG   +  ++ E+GVHR+ R    ++ GR HTS ++  V PE   +ID++I   
Sbjct: 61  SVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 QFIEASLKA 246


>gi|154705875|ref|YP_001424983.1| peptide chain release factor 2 [Coxiella burnetii Dugway 5J108-111]
 gi|154355161|gb|ABS76623.1| bacterial peptide chain release factor 2 (RF-2) [Coxiella burnetii
           Dugway 5J108-111]
          Length = 289

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 92/278 (33%), Positives = 148/278 (53%), Gaps = 7/278 (2%)

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E       ++    K++ +   E+ +  +     D  +  L+I+AG+GG+EA  +   L
Sbjct: 7   QEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQDWAEML 66

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+     +   ++ +S  +  G K      +G   +  ++ E+GVHR+ R    +
Sbjct: 67  LRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLVRKSPFD 126

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +  R HTS A+V V PE  +         ++RIDT RASG+GGQHVN TDSAVRITH+P+
Sbjct: 127 SGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVRITHLPS 186

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRT 308
           GI+V   +++SQH+N+ +AMK LRA+LY++E  +   +++     K +I  G+   +IR+
Sbjct: 187 GIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEVSKSEISWGN---QIRS 243

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y     R+ D R  +     + VL G ID  I   L  
Sbjct: 244 YVLDASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281


>gi|319900327|ref|YP_004160055.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           helcogenes P 36-108]
 gi|319415358|gb|ADV42469.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           helcogenes P 36-108]
          Length = 371

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 157/372 (42%), Gaps = 35/372 (9%)

Query: 3   FLSHKQICDLKNRFAEIELRM----------------SESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D+K R   +   +                      +       +   +  + 
Sbjct: 1   MITAEQLKDIKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWEDQKAAEAQMKKVKGLQ 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             IS Y+  K    ++      +  +    +            +  LE +          
Sbjct: 61  QWISGYNGVKTLTDEVQLAFDFYKDELVSEEEVDEAFAKASAAVEALELKNMLREEADQM 120

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ G K     
Sbjct: 121 D----CVLKINSGAGGTESQDWANMLMRMYLRYAETHGYKAAIANLQEGDEAGIKTCTIE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           ISG   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+VDI + +I  D
Sbjct: 177 ISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVDIKVANISWD 236

Query: 226 TMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLRAMKVLRAR 276
           T R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR  AM+ LR+ 
Sbjct: 237 TFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSI 296

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N     +  V+ G
Sbjct: 297 LYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTSDVNGVMDG 353

Query: 335 YIDDIINPLLTA 346
            ID  I   L  
Sbjct: 354 KIDGFIKAYLME 365


>gi|17987337|ref|NP_539971.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|62289859|ref|YP_221652.1| peptide chain release factor 2 [Brucella abortus bv. 1 str. 9-941]
 gi|82699784|ref|YP_414358.1| peptide chain release factor 2 [Brucella melitensis biovar Abortus
           2308]
 gi|189024100|ref|YP_001934868.1| peptide chain release factor 2 [Brucella abortus S19]
 gi|225627404|ref|ZP_03785441.1| peptide chain release factor 2 [Brucella ceti str. Cudo]
 gi|225852429|ref|YP_002732662.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457]
 gi|237815350|ref|ZP_04594348.1| peptide chain release factor 2 [Brucella abortus str. 2308 A]
 gi|254689165|ref|ZP_05152419.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|254693648|ref|ZP_05155476.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|254697300|ref|ZP_05159128.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254706874|ref|ZP_05168702.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|254710017|ref|ZP_05171828.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|254714019|ref|ZP_05175830.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|254716923|ref|ZP_05178734.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|254719019|ref|ZP_05180830.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|254730198|ref|ZP_05188776.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|256031512|ref|ZP_05445126.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|256044588|ref|ZP_05447492.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256061021|ref|ZP_05451178.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|256113462|ref|ZP_05454303.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159637|ref|ZP_05457399.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|256254917|ref|ZP_05460453.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|256257415|ref|ZP_05462951.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|256264074|ref|ZP_05466606.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str.
           63/9]
 gi|260168645|ref|ZP_05755456.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|260545394|ref|ZP_05821135.1| peptide chain release factor 2 [Brucella abortus NCTC 8038]
 gi|260563940|ref|ZP_05834426.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|260754664|ref|ZP_05867012.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|260757887|ref|ZP_05870235.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|260761710|ref|ZP_05874053.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883690|ref|ZP_05895304.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|261213915|ref|ZP_05928196.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|261218729|ref|ZP_05933010.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|261222099|ref|ZP_05936380.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|261314339|ref|ZP_05953536.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|261317565|ref|ZP_05956762.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|261321773|ref|ZP_05960970.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|261325021|ref|ZP_05964218.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|261758119|ref|ZP_06001828.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|265984009|ref|ZP_06096744.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|265988599|ref|ZP_06101156.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|265991013|ref|ZP_06103570.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994850|ref|ZP_06107407.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265998064|ref|ZP_06110621.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|294852271|ref|ZP_06792944.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026]
 gi|297248263|ref|ZP_06931981.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196]
 gi|306840093|ref|ZP_07472879.1| peptide chain release factor 2 [Brucella sp. NF 2653]
 gi|17983020|gb|AAL52235.1| bacterial peptide chain release factor 2 (rf-2) [Brucella
           melitensis bv. 1 str. 16M]
 gi|62195991|gb|AAX74291.1| peptide release factor 2 [Brucella abortus bv. 1 str. 9-941]
 gi|82615885|emb|CAJ10889.1| Class I peptide chain release factor domain:Peptide chain release
           factor 2:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189019672|gb|ACD72394.1| Peptide chain release factor 2 [Brucella abortus S19]
 gi|225617409|gb|EEH14454.1| peptide chain release factor 2 [Brucella ceti str. Cudo]
 gi|225640794|gb|ACO00708.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457]
 gi|237790187|gb|EEP64397.1| peptide chain release factor 2 [Brucella abortus str. 2308 A]
 gi|260096801|gb|EEW80676.1| peptide chain release factor 2 [Brucella abortus NCTC 8038]
 gi|260153956|gb|EEW89048.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|260668205|gb|EEX55145.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|260672142|gb|EEX58963.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674772|gb|EEX61593.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|260873218|gb|EEX80287.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|260915522|gb|EEX82383.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|260920683|gb|EEX87336.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|260923818|gb|EEX90386.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|261294463|gb|EEX97959.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|261296788|gb|EEY00285.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|261301001|gb|EEY04498.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|261303365|gb|EEY06862.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|261738103|gb|EEY26099.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|262552532|gb|EEZ08522.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|262765963|gb|EEZ11752.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001797|gb|EEZ14372.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094278|gb|EEZ18139.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str.
           63/9]
 gi|264660796|gb|EEZ31057.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|264662601|gb|EEZ32862.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|294820860|gb|EFG37859.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026]
 gi|297175432|gb|EFH34779.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196]
 gi|306404821|gb|EFM61114.1| peptide chain release factor 2 [Brucella sp. NF 2653]
 gi|326408941|gb|ADZ66006.1| Peptide chain release factor 2 [Brucella melitensis M28]
 gi|326538654|gb|ADZ86869.1| peptide chain release factor 2 [Brucella melitensis M5-90]
          Length = 321

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 105/317 (33%), Positives = 157/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ I+   Q   +  +L  +  +    S + D  +      ++      +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEI-----D 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     D     LE+ AG GG+E+  +   L RMY R+A     KVEV+   + 
Sbjct: 56  RRQIDMLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS A++ V P     I+
Sbjct: 116 EEAGIKSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V +   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR +A  +L
Sbjct: 176 VQVTEADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+      A    K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEEELKKREEATDAANATKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTNPQE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +   +   L   
Sbjct: 293 VLDGAVTPFMEAALAHR 309


>gi|319405668|emb|CBI79291.1| peptide chain release factor RF-2 [Bartonella sp. AR 15-3]
          Length = 332

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 112/327 (34%), Positives = 164/327 (50%), Gaps = 16/327 (4%)

Query: 29  VDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLA 85
            +   K      E   +   ++   ++ Q+ +E  +L  +  + N    I +        
Sbjct: 3   WNDAQKAQDMMRERQNLEDSMNSTQLFAQRLEECIELIAMGEEENDVGIIAETENTIRQL 62

Query: 86  IEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKW 145
             +  +         +L     D     LEI AG GG+E+  +   L RMY R+A   K 
Sbjct: 63  KSEIDK-----RQIEMLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKM 117

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KVEVL + D ++ G K     + G   +  +K ESGVHR+ R+   +++ + HTS A++ 
Sbjct: 118 KVEVLETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNSKRHTSFASIW 177

Query: 206 VLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQH 263
           V P     I+VD+   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH
Sbjct: 178 VYPVVDENIEVDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQH 237

Query: 264 QNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHR 320
           +NR  A  +LRARLY+ E K+   E +     K +IG G    +IR+Y     + + D R
Sbjct: 238 KNRATAWSMLRARLYEEELKKREEETNAVEASKTEIGWG---HQIRSYVLQPYQLVKDSR 294

Query: 321 INLTLYKLEYVLQGYIDDIINPLLTAH 347
             L     + VL G +D  I   L   
Sbjct: 295 TGLENTDPQTVLNGDLDAFIEAALAQR 321


>gi|240949505|ref|ZP_04753845.1| peptide chain release factor 2 [Actinobacillus minor NM305]
 gi|240296078|gb|EER46739.1| peptide chain release factor 2 [Actinobacillus minor NM305]
          Length = 248

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 97/249 (38%), Positives = 143/249 (57%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   F  ++ E+G+HR+ R    +++ R HTS A   V PE  E  ++++   
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITHIP+GI+V   + +SQHQN+ +AMK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E  +   E+      K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 KFIEASLKA 246


>gi|195116636|ref|XP_002002858.1| GI17608 [Drosophila mojavensis]
 gi|193913433|gb|EDW12300.1| GI17608 [Drosophila mojavensis]
          Length = 393

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 116/325 (35%), Positives = 184/325 (56%), Gaps = 6/325 (1%)

Query: 38  EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEI 97
               + P+++ +  +   ++       ++ + + D     + +   +      ++ E+ +
Sbjct: 57  RLTRLDPVVNSLEKHRALQRNITSEKDLLAEKDEDMRAL-MEEENNVYTSLLRKQEEDML 115

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
             LL   D +D  + I E+ AG GG EA LF  +L+ MY  Y     W+ E       D 
Sbjct: 116 QELLALSDDEDYPAVIFEVNAGAGGQEAMLFAQELYDMYTSYFDHMGWEYEEFDRETTDI 175

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           GG +     ++    ++ ++FE+GVHRVQRVPATE SGR+HTS A++ V+P  A++ V I
Sbjct: 176 GGLRHANLQVNDPEAYNWLRFEAGVHRVQRVPATEKSGRIHTSTASITVIPRPADVQVQI 235

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              D++I+T RASG+GGQHVNTTDSAVRI H+P+G+ V + SE+SQ +NR  A+K L+A+
Sbjct: 236 AERDLKIETKRASGAGGQHVNTTDSAVRIVHLPSGLAVESQSERSQLKNREVALKRLQAK 295

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI--NLTLYKLEYVLQG 334
           L   + +     + A RK Q G+ +R+E+IRTYNF Q R+TDHR+    TL+ L   L+G
Sbjct: 296 LIHQQLQSAEATKKATRKAQQGNLNRNEKIRTYNFVQDRVTDHRVQQGGTLHNLPGFLEG 355

Query: 335 --YIDDIINPLLTAHQAKMIGSASE 357
              +  +I  L   H+ + +    E
Sbjct: 356 GQQLSGLIERLQLEHRKQALMELLE 380


>gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
 gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
          Length = 285

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 108/258 (41%), Positives = 151/258 (58%), Gaps = 8/258 (3%)

Query: 94  ENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSS 153
           E     L      +D+   ILEI  G GG+EA  +   L RMY R+A  +++ V++L   
Sbjct: 24  ELADAELAAFFGPEDNADAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKRFDVKMLDFL 83

Query: 154 DNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA-AE 212
             D+ G K +   ISG   +  +  E G+HR+ R+   ++SGR HTS A+V V P+A  +
Sbjct: 84  PGDEAGVKSVTLQISGPYAYGLLAVEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGVD 143

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           ID+++  +D+R+D  RASG GGQHVN T SA+RITH+PT I+V   +EKSQH+NR  AMK
Sbjct: 144 IDIEVKEDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTNIVVQCQNEKSQHRNRETAMK 203

Query: 272 VLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKL 328
           VL+ARLYD+E K++  E+      K  IG G    +IRTY     R + DHR  +    +
Sbjct: 204 VLKARLYDLELKKLEAEKQESYESKNAIGFG---SQIRTYTMQPYRLVKDHRTGVDAGDV 260

Query: 329 EYVLQGYIDDIINPLLTA 346
           E VL G +D  I   L A
Sbjct: 261 EAVLDGDLDKFIRGFLLA 278


>gi|187917953|ref|YP_001883516.1| peptide chain release factor 2 [Borrelia hermsii DAH]
 gi|119860801|gb|AAX16596.1| bacterial peptide chain release factor 2 [Borrelia hermsii DAH]
          Length = 353

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 175/344 (50%), Gaps = 14/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             LK +  E E +++     +   K  E     + + +KI  ++    + QDL  +    
Sbjct: 17  DKLKTQLKEYEKQINNENFWNDNKKAQEILKNQNILKAKIEPWEDLIFKLQDLRELCEIA 76

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S+ +   L +      E+    L          K+  D  +  L I +G GG+EA  +V
Sbjct: 77  ESEEDTILLDKDINKLKEQYKHLLTI-----SYFKEDIDISNAFLTIHSGAGGTEACDWV 131

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+R+Y RY+  R +K E++   + + GG K +   I G+  +  +K E G+HR+ R+ 
Sbjct: 132 SMLYRIYLRYSERRGYKTELIDLLEAE-GGIKSVTIEIKGKYAYGFLKSEIGIHRLVRIS 190

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V +      +I++ I  EDIR+DT RASG+GGQHVN T SAVRITH
Sbjct: 191 PFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVNKTSSAVRITH 250

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK--RMANERSANRKLQIGSGDRSER 305
           + TGI+  + +++SQH+N+  AMKVL+++LY+  +   +  ++     K  I  G+   +
Sbjct: 251 LQTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKALEQQKSKSKQEEKKDISWGN---Q 307

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           IR+Y F     + DHR       +  V+ G ID+ I   L    
Sbjct: 308 IRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWKN 351


>gi|213581389|ref|ZP_03363215.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 197

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 112/195 (57%), Positives = 149/195 (76%), Gaps = 2/195 (1%)

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIR 223
           A ISG GV+ R+KFESG HRVQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+R
Sbjct: 1   AKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLR 60

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT R+SG+GGQHVNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E 
Sbjct: 61  IDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAET 120

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINP 342
            +     ++ R+  +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P
Sbjct: 121 AKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEP 180

Query: 343 LLTAHQAKMIGSASE 357
           ++  HQA ++ + SE
Sbjct: 181 IVQEHQADLLAALSE 195


>gi|308804958|ref|XP_003079791.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
 gi|116058248|emb|CAL53437.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
          Length = 419

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 8/353 (2%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI---ISKISIYDQKKQEEQ 60
           L    +  LK RF  ++ R S     +   K     A ++ +   +     +++   + +
Sbjct: 65  LEIADVKGLKMRFESLDERSSAGDLWEDANKARVVMAELAGVREELDAARAFEEHVSDAK 124

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               +     SD+E+ ++    + ++E     LE      LL    D     +++I AG 
Sbjct: 125 TALELAEVGESDNEMSEMLCEAMASVEALDEALEQWELRRLLGGKYDA-LGAVVQIYAGA 183

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG +A  +   L RMY  +   R + V V    + + GG K     + GR  +  +  E 
Sbjct: 184 GGLDAQDWTEMLERMYIGWCEKRGYGVRVTERQEGEGGGLKTATLEVDGRHAYGYLSSEK 243

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           G HR+ R           TS A V V+P    E +V +P  D+ I TMR+SG+GGQ+VN 
Sbjct: 244 GTHRLVRQSPFNKDAARQTSFAAVDVIPLLQDEDEVKVPEGDLEITTMRSSGAGGQNVNK 303

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
            ++AVRI H+PTGI V     ++Q  NR  AM  ++A+L  +  +    + +  R   I 
Sbjct: 304 LETAVRIKHVPTGISVKAEEHRTQALNRQAAMLRIKAKLTALAEEARVADIAELR-GDIV 362

Query: 299 SGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             +  ++IR Y       + D R  +    +  VL G +D+ +N  L    +K
Sbjct: 363 KAEWGQQIRNYVLHPYKMVKDVRTGVETSDVTRVLNGGLDEYMNGYLRWKASK 415


>gi|294675125|ref|YP_003575741.1| peptide chain release factor 2 [Prevotella ruminicola 23]
 gi|294472270|gb|ADE81659.1| peptide chain release factor 2 [Prevotella ruminicola 23]
          Length = 374

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+  R                + E +LR       +   +  E+   +  I 
Sbjct: 1   MITQDQLKDVLERADALHRYLEIDKKKIEYEEEDLRTQAPDFWEDRKRAEEQMKKVKGIK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  Y + +    +L         +    +  +       K I +LE       + +  
Sbjct: 61  KWLDGYKEVRTLADELQLAFDFFKDEMVTEEEVEDTYAKAIKAIEDLEL----KNMLRQK 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D    +L+I +G GG+EA  +   L RMY R+A    +KV + +  D D+ G K +   
Sbjct: 117 EDPMEAVLKINSGAGGTEAQDWASMLMRMYMRWAEAHGYKVTISNLLDGDEAGIKSVTMQ 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
           + G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 LEGGDYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPAKLSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +  T          ++  +  + Q +N+ RAM +L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYWYTDPDTGEEEEILIENTETRDQPKNKERAMTLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+    ++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRLEAQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTTDVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G IDD I   L  
Sbjct: 354 GKIDDFIKAYLME 366


>gi|302811530|ref|XP_002987454.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
 gi|300144860|gb|EFJ11541.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
          Length = 505

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 150/306 (49%), Positives = 207/306 (67%), Gaps = 9/306 (2%)

Query: 30  DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKE 89
           +  IK+ +E   +   +  I     K++E   L  ++ +   D E+R LA  E+    +E
Sbjct: 22  EKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATRE 81

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           +R+ ++++   L+PKD  D +        G GG EA++F  DLF+MYE+YAA   W+ EV
Sbjct: 82  VRDAQHDVLLELIPKDEADSR--------GAGGDEASIFASDLFKMYEKYAANNSWRFEV 133

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           LS +  D   YKE  A ISG GV+  +KFESGVHRVQRVP TE +GR+HTS A+VA+LPE
Sbjct: 134 LSITTTDTRCYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPE 193

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLR 268
           A EIDV+I  ++I+IDT RA G+GGQHVNTT SAVR+TH PTGI+V    E+SQH+N+ +
Sbjct: 194 ANEIDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAK 253

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKL 328
           A+ +L ARLY++ER R A  RS  R+ QIGS DRSERIRTYNF QGR+TD R+ +T + +
Sbjct: 254 ALSILYARLYELERSRAAASRSELRQDQIGSSDRSERIRTYNFPQGRVTDRRVGVTQHAI 313

Query: 329 EYVLQG 334
           E +++G
Sbjct: 314 EQIMEG 319


>gi|325662438|ref|ZP_08151044.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331086228|ref|ZP_08335310.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471272|gb|EGC74496.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406387|gb|EGG85901.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 316

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 168/319 (52%), Gaps = 9/319 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   + +     ++ ++ Q L  +  + N +S I+++                 
Sbjct: 1   MKELKSLQDSVKRTEELYRQYEDIQILIDMAYEENDESMIKEIETELKQIESTYEE---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +    L  +  D  + I+ + AG GG+EA  +V  L+RMY R+   + +  EVL   D 
Sbjct: 57  -LRIETLLSEEYDKDNAIVTLHAGAGGTEACDWVNMLYRMYNRWIESKGFTTEVLDYLDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEID 214
           D  G K +   ++G   +  ++ E GVHR+ R+    ++ +  TS A+  V+P+   +ID
Sbjct: 116 DITGIKTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSANKRQTSFASCDVVPDLEDDID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I  ++++IDT RASG+GGQHVN T SA+R+TH+PTGI+V   +E+SQH N+ +AM++L
Sbjct: 176 IEINEDELKIDTYRASGAGGQHVNKTSSAIRLTHLPTGIVVQCQNERSQHSNKEKAMQML 235

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVL 332
           +A+LY ++ +  A + S  R  ++       +IR+Y       + DHR N     +  VL
Sbjct: 236 KAKLYLLKEQEQAEKVSGIR-GEVKEIGFGNQIRSYVMQPYTLVKDHRTNEESGNVTSVL 294

Query: 333 QGYIDDIINPLLTAHQAKM 351
            G +D  IN  L    AK 
Sbjct: 295 DGNLDPFINAYLKMRNAKK 313


>gi|306843816|ref|ZP_07476414.1| peptide chain release factor 2 [Brucella sp. BO1]
 gi|306275894|gb|EFM57610.1| peptide chain release factor 2 [Brucella sp. BO1]
          Length = 321

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 105/317 (33%), Positives = 157/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ I+   Q   +  +L  +  +    S + D  +      ++      +
Sbjct: 1   MRERQQLEDSINGINYLKQTLNDNVELIAMGEEEGDKSIVEDAEKTIRDLKDEI-----D 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     D     LE+ AG GG+E+  +   L RMY R+A     KVEV+   + 
Sbjct: 56  RRQIDMLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS A++ V P     I+
Sbjct: 116 EEAGIKSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V +   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR +A  +L
Sbjct: 176 VQVTEADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+      A    K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEEELKKREEATDAANATKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTNPQE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +   +   L   
Sbjct: 293 VLDGAVTPFMEAALAHR 309


>gi|49475632|ref|YP_033673.1| peptide chain release factor 2 [Bartonella henselae str. Houston-1]
 gi|49238439|emb|CAF27667.1| Peptide chain release factor 2 [Bartonella henselae str. Houston-1]
          Length = 322

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 109/318 (34%), Positives = 160/318 (50%), Gaps = 13/318 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +  E   +   I+ I  + +  +E  +L  +  + +    I D          +  +   
Sbjct: 1   MMRERQRLDDSINGIRSFTKTLEECIELIAMGEEESDIEIITDAENSIRNLKSEIDK--- 57

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                  L     D     LE+ AG GG+E+  +   L RMY R+A   K KVE+L   D
Sbjct: 58  --RQIDALLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            ++ G K     + G   +  +K ESGVHR+ R+   +++ + HTS A++ V P     I
Sbjct: 116 GEEAGIKSATLLVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +VD+   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR  A  +
Sbjct: 176 EVDVSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRAIAWSM 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           LRARLY+ E K+   E +     K +IG G    +IR+Y     + + D R  +     +
Sbjct: 236 LRARLYEEELKKREEETNAVEASKTEIGWG---HQIRSYVLQPYQLVKDLRTGVENTDPQ 292

Query: 330 YVLQGYIDDIINPLLTAH 347
            VL G +D  I   L   
Sbjct: 293 SVLNGNLDSFIEAALARR 310


>gi|114651377|ref|XP_001150094.1| PREDICTED: mitochondrial translational release factor 1 isoform 2
           [Pan troglodytes]
          Length = 487

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 131/405 (32%), Positives = 210/405 (51%), Gaps = 53/405 (13%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIG--------------------------------------------DHNSDSEIRDLAQ 80
           +                                              +   + ++++LA 
Sbjct: 136 MCKSRQSLALWPRLECSNVITAHFNLELLDSSSPPTSASQVAGTTGLNKQDEKQLQELAL 195

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--TGGSEAALFVGDLFRMYER 138
            E   I+++I  L NE+   L+PK+  D    ILE+ AG  TGG     F  ++F MY+ 
Sbjct: 196 EERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQN 255

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV- 197
           Y+  + W+ E+L+ +  D GG     A ISG GV+  +K+E G+HRVQR+P    S R+ 
Sbjct: 256 YSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQ 315

Query: 198 --HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
             HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHVN TDSAVR+ HIPTG++V
Sbjct: 316 RIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVV 375

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
               E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ+G+  +SERIRTYNF+Q 
Sbjct: 376 ECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQD 435

Query: 315 RITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSASE 357
           R++DHRI   +  ++  L G   +D +I  LL +   + I    +
Sbjct: 436 RVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAELLD 480


>gi|39935519|ref|NP_947795.1| peptide chain release factor 2 [Rhodopseudomonas palustris CGA009]
 gi|39649371|emb|CAE27894.1| translation peptide releasing factor RF-2 [Rhodopseudomonas
           palustris CGA009]
          Length = 322

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 95/317 (29%), Positives = 160/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            +E  ++   ++ I   +++  +  ++  +      +  +++         ++  R    
Sbjct: 1   MQERTSLEDSLTGIGKVERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     LE+ AG GG+E+  +   L RMY R+A    +K+E L  S+ 
Sbjct: 57  -RELEALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           ++ G K     ISG   +  +K E+GVHR+ R+   +++ R HTS ++V + P       
Sbjct: 116 EEAGIKSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIK 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVL 273
           +DI   D+R+DTMR+ G+GGQHVN T+SAVR+THIPTG+ +V  + +SQH+NR +A  +L
Sbjct: 176 IDIAESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY++E K+           K +IG G    +IR+Y     + + D R  +       
Sbjct: 236 RARLYEIELKKREEQAAADQAAKTEIGWG---HQIRSYVLQPYQMVKDLRTGVQTSDTAG 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D+ +   L   
Sbjct: 293 VLDGDLDEFMAATLAQR 309


>gi|161618874|ref|YP_001592761.1| peptide chain release factor 2 [Brucella canis ATCC 23365]
 gi|254704223|ref|ZP_05166051.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
 gi|260566529|ref|ZP_05836999.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40]
 gi|261754891|ref|ZP_05998600.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
 gi|161335685|gb|ABX61990.1| peptide chain release factor 2 [Brucella canis ATCC 23365]
 gi|260156047|gb|EEW91127.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40]
 gi|261744644|gb|EEY32570.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
          Length = 321

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 105/317 (33%), Positives = 157/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ I+   Q   +  +L  +  +    S + D  +      ++      +
Sbjct: 1   MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEI-----D 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     D     LE+ AG GG+E+  +   L RMY R+A     KVEV+   + 
Sbjct: 56  RRQIDMLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS A++ V P     I+
Sbjct: 116 EEAGIKSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V +   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR +A  +L
Sbjct: 176 VQVTEADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+      A    K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEEELKKREEATDAANATKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTNPQE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +   +   L   
Sbjct: 293 VLDGAVTPFMEAALAHR 309


>gi|322699423|gb|EFY91185.1| putative translation releasing factor RF-1 [Metarhizium acridum
           CQMa 102]
          Length = 800

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 111/371 (29%), Positives = 182/371 (49%), Gaps = 39/371 (10%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   L      ++  ++         +       +  + + +S + Q     +DL  + 
Sbjct: 418 QRAKALSAEHEALQKSLNAQFDSQKARRAG----ELHRVAAALSAWQQSLSSIRDLQAMA 473

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D   D ++  +A+ E+ A E ++  LE  ++  L P+    D  C++E R G GG E  
Sbjct: 474 DDE-QDPDLAAIARDELQAEEAKLGSLEKNLSASLTPRHPFADMPCMIEFRPGPGGLEGR 532

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG----------YKEIVATISGRGVFSRM 176
            F   LF+MY+     R ++  VL     D  G           +E +  I  +G +   
Sbjct: 533 YFTDSLFKMYKALCTRRGYRANVLKYEMADAAGDQSSSAGENPVQEAILEIQDQGAYDMF 592

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-------------DVDIPLEDIR 223
           + E+G+HRVQR+P+TE+ GRVHTSA  V VLP   E              D  +  ++++
Sbjct: 593 RSEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESSSGGEADADDPESDFYVNPQEVK 652

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVER 282
           ++TMRA G+GGQHVN T+SA+R+TH+PTG  V+    +SQ +NR  A K+LR+R+     
Sbjct: 653 VETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREDAWKLLRSRIASQRA 712

Query: 283 KRMANERSANRKL-----QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-- 335
           +   +E +  R       QI    R ++IRTYN++Q R TDHR  L ++ L  VL G   
Sbjct: 713 ELRMHEAARLRNSVLAQTQI---TRGDKIRTYNYNQDRCTDHRAGLDVHNLPDVLDGGET 769

Query: 336 IDDIINPLLTA 346
           +D +++     
Sbjct: 770 LDRVMDAAKEW 780


>gi|119629057|gb|EAX08652.1| mitochondrial translational release factor 1, isoform CRA_c [Homo
           sapiens]
          Length = 487

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 131/405 (32%), Positives = 210/405 (51%), Gaps = 53/405 (13%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIG--------------------------------------------DHNSDSEIRDLAQ 80
           +                                              +   + ++++LA 
Sbjct: 136 MCKSRQSLALWPRLECSSVIIAHFNLELLDSSNPPTSASQVAGTTGLNKQDEKQLQELAL 195

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--TGGSEAALFVGDLFRMYER 138
            E   I+++I  L NE+   L+PK+  D    ILE+ AG  TGG     F  ++F MY+ 
Sbjct: 196 EERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQN 255

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV- 197
           Y+  + W+ E+L+ +  D GG     A ISG GV+  +K+E G+HRVQR+P    S R+ 
Sbjct: 256 YSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQ 315

Query: 198 --HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
             HT   +V VLP+  E+DV +  +D+RIDT RA G+GGQHVN TDSAVR+ HIPTG++V
Sbjct: 316 RIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVV 375

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
               E+SQ +N+  A +VLRARLY    ++   ++ + RKLQ+G+  +SERIRTYNF+Q 
Sbjct: 376 ECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQD 435

Query: 315 RITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSASE 357
           R++DHRI   +  ++  L G   +D +I  LL +   + I    +
Sbjct: 436 RVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAELLD 480


>gi|254796954|ref|YP_003081791.1| peptide chain release factor 2 [Neorickettsia risticii str.
           Illinois]
 gi|254590201|gb|ACT69563.1| peptide chain release factor 2 [Neorickettsia risticii str.
           Illinois]
          Length = 334

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 96/333 (28%), Positives = 170/333 (51%), Gaps = 7/333 (2%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
            EI+  +      +   +        S I + +  + +   +  DL  +I   + D E  
Sbjct: 2   EEIQALVDSPRLWEDQSRAQLLLKEKSQIETSLKEFRELSIQLDDLTEMIELASKDGE-- 59

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           + A  ++      ++E   +     L     D   C+LEI++G GG+E+  +   L RMY
Sbjct: 60  EGAMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQSGAGGTESNDWAMMLLRMY 119

Query: 137 ERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
            R+A    K++V+++   + ++ G K     + G+  +   + E+GVHR+ R+   +A+ 
Sbjct: 120 TRWAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHRLVRISPFDANA 179

Query: 196 RVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           + HTS A V V P    EI++ I  +D++IDT RASG+GGQHVN T+SAVRITH+P+ I+
Sbjct: 180 KRHTSFAKVFVSPCMEGEINISIDEKDLKIDTYRASGAGGQHVNKTESAVRITHLPSKIV 239

Query: 255 VTSSEKSQHQ-NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V S        N+  A+++L++RLY++E ++   + +A R ++   G    +IR+Y    
Sbjct: 240 VQSQSSRSQHQNKAEAIQMLKSRLYEIELRKKEEKVNAARNVEDSIG-WGYQIRSYVLHP 298

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            + I D R    +  +  VL G +D  I   ++
Sbjct: 299 YQMIKDLRTGHEVGNITSVLDGDLDSFIIATIS 331


>gi|257468914|ref|ZP_05633008.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 326

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 110/334 (32%), Positives = 175/334 (52%), Gaps = 17/334 (5%)

Query: 25  ESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           E    +       + +E      I+++    + +  EE+ L   +    +D +     + 
Sbjct: 2   EENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDFVEMGEADFQTELEEKH 61

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
            +L  +       +  +  LL     D  + I+ I +G GG+EA  +   L+RMY R+  
Sbjct: 62  MILGKDI------DHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCN 115

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            +K+K+  +     D  G K I   + GR  +  MK E G+HR+ R+   +A+ + HTS 
Sbjct: 116 EKKYKISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSF 175

Query: 202 ATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V V+PE  E  +V+I   D+RIDT RASG+GGQHVN TDSAVRITHIPTGI+V    E
Sbjct: 176 ASVEVMPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRE 235

Query: 260 KSQHQNRLRAMKVLRARLYD--VERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +SQ  NR  AMK+L+++L +  +++K    +R    + +IG G+   +IR+Y F     +
Sbjct: 236 RSQLNNRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGN---QIRSYVFQPYTLV 292

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            DHR +     ++ V+ G ID  IN  L  ++ K
Sbjct: 293 KDHRTSAESGNIKAVMDGDIDIFINTYLRWNKTK 326


>gi|78778568|ref|YP_396680.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9312]
 gi|78712067|gb|ABB49244.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
           marinus str. MIT 9312]
          Length = 354

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 177/339 (52%), Gaps = 6/339 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           LK +  E+E   ++    +      ++   +  + +++ + D+ K    D +  +  ++ 
Sbjct: 11  LKAKRRELEQISAQPEFWENQEAAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSL 70

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + E  +   +E     K++R+  ++  +  L     D +  ++ I+AG GG++A  +V  
Sbjct: 71  EPE--EEMILESQQGLKKLRDNLDKWEFERLLCGEYDKEGAVVSIKAGAGGTDAQDWVEI 128

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A   +  + +   S  ++ G K +   I G+  +  +++E G HR+ R+   
Sbjct: 129 LLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQYEKGTHRLVRISPF 188

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+G+  TS A V V+P+    I +DIP +D+ I T R+ G+GGQ+VN  ++AVRI H+P
Sbjct: 189 NANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLP 248

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           +GI V  + E+SQ QN+ +AM +L+++L  + +++ A E +   K  I       +IR Y
Sbjct: 249 SGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEIADI-KGDIVEAAWGNQIRNY 307

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            F   + + D R      +L+ VL G ++  I+ LL  +
Sbjct: 308 VFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRMN 346


>gi|323359619|ref|YP_004226015.1| protein chain release factor B [Microbacterium testaceum StLB037]
 gi|323275990|dbj|BAJ76135.1| protein chain release factor B [Microbacterium testaceum StLB037]
          Length = 370

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 103/350 (29%), Positives = 168/350 (48%), Gaps = 15/350 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  LK     +          D      +  + +S   +++    + +Q   DL  +  
Sbjct: 25  DVDALKADIDRLSEEAGAPDLWDDVDNAQKVTSRLSHRQAELKRITEIEQRLDDLEVLVE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D +  D A+ E+ +++  I +LE +           D +S ++ IR+G GG +A
Sbjct: 85  LAIEMDDEDSADEARRELASLKDVIGQLEVQTL----LDGEYDSRSAVVTIRSGAGGDDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             F   L RMY R+A   K+ V+V+ +S  +  G K     +     +  +  E+G HR+
Sbjct: 141 TDFAEMLLRMYLRWAERHKYPVKVMDTSYAEGAGIKSATFEVDVPYAYGTLSVEAGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAV 244
            R+     + +  TS A V V+P   E       E DIR+D  R+SG GGQ VNTTDSAV
Sbjct: 201 ARISPFGGADKRQTSFAAVEVIPVMEEAVEVEVPEGDIRVDVFRSSGPGGQSVNTTDSAV 260

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG--SGD 301
           RITHIPTG++V+  +EKSQ QNR  AM+VL+ RL  ++R+    E +A +K   G  +  
Sbjct: 261 RITHIPTGLVVSMQNEKSQIQNRAAAMRVLQTRLLLLKRE----EEAAKKKELAGTITAS 316

Query: 302 RSERIRTY-NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             +++R+Y  + Q  + D R    +     V  G +D +I   +   + K
Sbjct: 317 WGDQMRSYFLYGQQLVKDLRTGYEVGNPAVVFDGDLDGLIAAGIRWRKRK 366


>gi|321479100|gb|EFX90056.1| hypothetical protein DAPPUDRAFT_299896 [Daphnia pulex]
          Length = 417

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 128/357 (35%), Positives = 199/357 (55%), Gaps = 17/357 (4%)

Query: 9   ICDLKNRFAE-----IELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + ++K +F E     IE + S    V+           I  +        Q + + Q+L 
Sbjct: 66  LLNIKKKFDESGFQNIESK-SGIGVVNKQ--------HIQSLAGLGGKLLQTENDLQELK 116

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D + + ++  +   E   +++ + +++NE+  L+L +D    +  I+E  AG GG 
Sbjct: 117 ALSADDDKNGDLAKMVSEEFSQLKQILVQIQNEVLELILQEDNHQTEGIIMEFSAGVGGQ 176

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           E+ LF  ++ +MY  Y     W  E+     +D  G +     I+    + R++FESGVH
Sbjct: 177 ESMLFCNEILQMYITYCESEGWDYELTDIEKSDLEGIRHAAICINNSDAYDRLQFESGVH 236

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE +GRVHTS   VA+LP  +E+ V+I  +D++I+T RASG+GGQHVNTT+SA
Sbjct: 237 RVQRVPKTEKAGRVHTSTVAVAILPRPSEVTVNIEQKDLKIETKRASGAGGQHVNTTESA 296

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI HIP+G++    +++SQ QNR  A+  +RARL+ ++  +      ++RKLQ+GS  R
Sbjct: 297 VRIVHIPSGVVAECQTQRSQMQNRKVAIDKIRARLFQMKIDQQLATTRSSRKLQVGSSGR 356

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSASE 357
           SE+IRTYNF Q RITDHRIN T + L   L+G      +I  L      + +    E
Sbjct: 357 SEKIRTYNFPQDRITDHRINFTSHNLGEFLRGARPFHVLIEKLKEESYKERVFEFLE 413


>gi|304383714|ref|ZP_07366173.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973]
 gi|304335238|gb|EFM01509.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973]
          Length = 374

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 88/373 (23%), Positives = 162/373 (43%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ +++ R                + E ELR       +   +  E+   +  I 
Sbjct: 1   MITSEQLKNVQERAEALFRYLEIDKKQIEYEEEELRTQAPDFWEDTARAQEQMKKVKGIK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  Y + +    +L      ++ +    +  + +     K I  LE         +  
Sbjct: 61  RWLDGYAEVRTLTDELQLAFDFYHDEMVTEEEVEDDYRKAVKAIENLELMNM----LRQK 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+L+I +G GG+E+  +   L RMY R+A    ++  + +  + D+ G K +   
Sbjct: 117 EDPMGCVLKINSGAGGTESQDWAQMLMRMYVRWAEAHGYRCTISNLQEGDEAGIKSVTME 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
           I G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 IEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPAKVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           D  R+ G+GGQ+VN  ++ VR+ +  T          ++  +  + Q +NR  AM++L++
Sbjct: 237 DLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+    ++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRLEAQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTTDVDGVMD 353

Query: 334 GYIDDIINPLLTA 346
           G ID+ I   L  
Sbjct: 354 GKIDEFIKAYLME 366


>gi|193613150|ref|XP_001944471.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 400

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 127/312 (40%), Positives = 186/312 (59%), Gaps = 5/312 (1%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            + + +S     K + Q L     +   D E  +  Q E  + E+++  LE E+   L+P
Sbjct: 78  NVFALVSAIRSLKVDLQSLDEFEIEKEKDEEFGEQLQKEKKSHEEQLTLLELELLNSLVP 137

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D +  +LEI AG GG EA +F  +LF MY  +A  + WK EV      + GG +  
Sbjct: 138 NENFDCEDVMLEITAGVGGQEAMIFTQELFEMYNSFAHYKGWKSEVADYCHTEMGGIRHA 197

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
              +SG   +S ++ E GVHRVQRVP TE SGR+HTS  TVA+LP+  E+DV I   D+ 
Sbjct: 198 CLMLSGTDCYSLLQHEGGVHRVQRVPKTEKSGRIHTSTVTVAILPQPTELDVVINDRDLV 257

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           I+T RASG+GGQHVN TDSA+R+ H PTG++V   +++SQ +NR  A++ LRA +Y  + 
Sbjct: 258 IETKRASGAGGQHVNKTDSAIRMHHKPTGVIVECQTDRSQIKNRKIALQKLRAIIYKKQL 317

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           ++  +   + RK Q+GS  RSE+IRTYNF+Q RITDHR+  + + L   L+G   +D ++
Sbjct: 318 EQQQSLTRSARKQQVGSSARSEKIRTYNFNQDRITDHRLTKSFHNLVGFLEGREYLDKVV 377

Query: 341 NPLLTAHQAKMI 352
             L    +AK I
Sbjct: 378 IEL--QERAKQI 387


>gi|71892043|ref|YP_277773.1| peptide chain release factor 2 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796149|gb|AAZ40900.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 348

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 169/342 (49%), Gaps = 12/342 (3%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            +    +      F  I   +                   S +   I+I DQ  +   DL
Sbjct: 1   MIFDYDLK--IKHFKIISNELKSPGIWKNPKTAKILRQKSSSLKIFINIVDQLYKNLVDL 58

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
           + ++       E  ++   E+     ++    +++    +     D+ +C ++I++G+GG
Sbjct: 59  NDLLELTE---EYDNILLSEIHDQSIDLERTLSQLEISRMFIGKYDNSNCYIDIQSGSGG 115

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA  +   L RMY R+   + +  +V+  S  +  G K     + G   +  ++ ESGV
Sbjct: 116 IEAQDWASMLLRMYLRWIDHKGFMADVIEESTGEVTGIKSATIQVIGPYAYGWLRTESGV 175

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R    +++ + HTS A+V V PE    I++ I  ED+R D  RASG+GGQHVN T+
Sbjct: 176 HRLVRKSPFDSAKKRHTSFASVFVYPELDDSINIHIRPEDLRCDVYRASGAGGQHVNRTE 235

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR--MANERSANRKLQIG 298
           SAVRITHIPT I+    S++SQH+N+ +AMK LRA+LY++E ++     +   + K+ I 
Sbjct: 236 SAVRITHIPTNIVTQCQSDRSQHKNKNQAMKQLRAKLYELELQKKNYEKKMRESNKVNIT 295

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
            G+   +IR+Y     R+ D R       ++ VL G +DD I
Sbjct: 296 WGN---QIRSYILDNSRVKDLRTGFEKRNVKAVLNGDLDDFI 334


>gi|332534752|ref|ZP_08410580.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035839|gb|EGI72323.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 248

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 94/248 (37%), Positives = 144/248 (58%), Gaps = 7/248 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D     L++++G+GG+EA  +   L RMY R+   + +KVE++ ++D D  G K
Sbjct: 1   MFSGPHDSNDAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                  G   +  ++ E+GVHR+ R    ++SGR HTS A+  V PE  +  ++DI   
Sbjct: 61  GATVRFVGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +E+SQH+N+ +AMK L+A+L++
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 LELQQQNAEKQTQEDAKSDIGWG---SQIRSYVLDDARIKDLRTGVENRNTQSVLDGNLD 237

Query: 338 DIINPLLT 345
             I   L 
Sbjct: 238 KFIEASLK 245


>gi|302024124|ref|ZP_07249335.1| peptide chain release factor 2 [Streptococcus suis 05HAS68]
          Length = 253

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 91/254 (35%), Positives = 151/254 (59%), Gaps = 8/254 (3%)

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
             LL  D  D  + ILEI  G+GG+EA  +   L RMY+RY   + + VE L     D+ 
Sbjct: 1   MTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEA 60

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDI 217
           G K +  + +G   +  +K E GVHR+ R+   +++ R HTS  +V V+PE    I+++I
Sbjct: 61  GIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEI 120

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRAR 276
             +++++DT R+ G+GGQ+VN   + VR+THIPTGI+  S+ +++Q+ NR RAMK+L+A+
Sbjct: 121 RDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAK 180

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQ 333
           LY +E+++ A E  + +  K +I  G    +IR+Y F+    + DHR    + +++ V+ 
Sbjct: 181 LYQLEQEKKAAEVDSLKGDKKEITWG---SQIRSYVFTPYTMVKDHRTGYEVAQVDKVMD 237

Query: 334 GYIDDIINPLLTAH 347
           G +D  I+  L   
Sbjct: 238 GDLDGFIDAYLKWR 251


>gi|317063162|ref|ZP_07927647.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
 gi|313688838|gb|EFS25673.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 328

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 110/334 (32%), Positives = 175/334 (52%), Gaps = 17/334 (5%)

Query: 25  ESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           E    +       + +E      I+++    + +  EE+ L   +    +D +     + 
Sbjct: 4   EENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDFVEMGEADFQTELEEKH 63

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
            +L  +       +  +  LL     D  + I+ I +G GG+EA  +   L+RMY R+  
Sbjct: 64  MILGKDI------DHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCN 117

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
            +K+K+  +     D  G K I   + GR  +  MK E G+HR+ R+   +A+ + HTS 
Sbjct: 118 EKKYKISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSF 177

Query: 202 ATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
           A+V V+PE  E  +V+I   D+RIDT RASG+GGQHVN TDSAVRITHIPTGI+V    E
Sbjct: 178 ASVEVMPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRE 237

Query: 260 KSQHQNRLRAMKVLRARLYD--VERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RI 316
           +SQ  NR  AMK+L+++L +  +++K    +R    + +IG G+   +IR+Y F     +
Sbjct: 238 RSQLNNRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGN---QIRSYVFQPYTLV 294

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            DHR +     ++ V+ G ID  IN  L  ++ K
Sbjct: 295 KDHRTSAESGNIKAVMDGDIDIFINTYLRWNKTK 328


>gi|303235160|ref|ZP_07321780.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
 gi|302493752|gb|EFL53538.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
          Length = 329

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 10/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           +    ++   D   K  E +  ++ +   +  YD+ +++ +++  ++     D+   +  
Sbjct: 2   QQETMKAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDN--TEEY 59

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + E+    K + +  +E     L     D  + I+ I AG GG+EA  +   L RMY R+
Sbjct: 60  EKEISKTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
            A +K+  ++   + + +GG K +   + G   +  +K E GVHR+ R+   +   R HT
Sbjct: 120 IADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHT 179

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V PE     D+ I  +D++IDT RASG+GGQHVN TDSAVRITHIPTG+ V   
Sbjct: 180 SFASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG- 314
           +E+SQ  NR  AM +L A+L  ++ +    +    +    QI  G    +IR+Y F    
Sbjct: 240 TERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWG---SQIRSYVFQPYT 296

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N    +++ VL G +D  IN  L+ +
Sbjct: 297 LVKDHRTNCESSQVQDVLDGDLDKFINAYLSHN 329


>gi|289642137|ref|ZP_06474289.1| peptide chain release factor 2 [Frankia symbiont of Datisca
           glomerata]
 gi|289508100|gb|EFD29047.1| peptide chain release factor 2 [Frankia symbiont of Datisca
           glomerata]
          Length = 366

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 98/347 (28%), Positives = 158/347 (45%), Gaps = 14/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R A++E   ++        +       +S +   IS  +  ++   D+   + 
Sbjct: 24  DLDTLRRRAADLEREAADPQLWSDQDRAQAVTRRLSSVRGDISRVEALRRRLDDVIAALD 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D        +  LA +         +    L     D++  I+++ AG GG +AA 
Sbjct: 84  LGDDDLLAEAANDLPTLARDISA------LEVRTLLSGEYDERDAIVQLSAGAGGVDAAD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +  EV  +S+ ++ G K     I     +  ++ E GVHR+ R
Sbjct: 138 WTAMLLRMYLRWAERHGYAAEVFDTSEAEEAGLKSATFQIKAPYAYGTLRSEHGVHRLVR 197

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V V P       V+I  +++RID  R+SG GGQ VNTTDSAVRI
Sbjct: 198 ISPFDNQNRRQTSFAGVEVTPVVEQSDHVEIDDKELRIDIFRSSGPGGQGVNTTDSAVRI 257

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           TH+PT I+V   +E+SQ QN+  AM VL+A+L +  R   A E+         +  G   
Sbjct: 258 THLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRLTGGPQDVSFG--- 314

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +IR Y     + + D R  +       VL G ID+ I+  +   + 
Sbjct: 315 SQIRNYVLHPYQMVKDLRTEVETSGTAAVLDGDIDEFIDAEIRWRRT 361


>gi|330814308|ref|YP_004358547.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487403|gb|AEA81808.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 312

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 101/313 (32%), Positives = 166/313 (53%), Gaps = 13/313 (4%)

Query: 37  EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENE 96
           +E   +  I++    Y ++    ++L  +    N ++  ++L         K++     E
Sbjct: 4   KEKNHLERILNDYKSYKEELTNIKELVELNTKDNDENLTKELEMS-----LKKLELKIRE 58

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
           I         +D+    +EI AG GG+E+  +   L  MY ++A  + +   ++S +  +
Sbjct: 59  IELFCFLSKKNDELDVYVEIHAGAGGTESQDWAEMLRTMYIKWAEKKSFSFSLISETKGE 118

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DV 215
           + G+K     I G+  +  ++ ESGVHR+ R+   ++  R HTS A+V V P   E   V
Sbjct: 119 EVGFKSSTIKIEGKYAYGFLRHESGVHRLVRISPFDSDKRRHTSFASVWVYPVVNESVVV 178

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           DI  +D+RIDT R+SG+GGQHVNTTDSAVRITH PT I+V   +E+SQH+N+  AM +L+
Sbjct: 179 DINDKDLRIDTYRSSGAGGQHVNTTDSAVRITHQPTNIVVQCQNERSQHKNKDTAMNMLK 238

Query: 275 ARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYV 331
           ARLY++E ++   E     + K  IG G    +IR+Y     + + D R  L     + V
Sbjct: 239 ARLYELELQKKKEESKSVESSKTDIGWG---HQIRSYVLQPYQMVKDSRTGLERTDPDKV 295

Query: 332 LQGYIDDIINPLL 344
           L G+++  +   L
Sbjct: 296 LDGHLNPFLEESL 308


>gi|329124057|ref|ZP_08252604.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116]
 gi|327467482|gb|EGF12980.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116]
          Length = 283

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 98/285 (34%), Positives = 159/285 (55%), Gaps = 11/285 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D +  + A  E+  +E+++ +LE    +  +     D  +C ++++AG+GG+EA
Sbjct: 4   LAIEAEDEDTFNEAVAELDELEQQLEKLE----FRRMFSGEHDACNCYVDLQAGSGGTEA 59

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+
Sbjct: 60  QDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRL 119

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAV 244
            R    +++ R HTS +   V PE  +         D+RID  RASG+GGQHVN T+SAV
Sbjct: 120 VRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 179

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           RITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G 
Sbjct: 180 RITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQVMEDNKSDIGWG- 238

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 239 --SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 281


>gi|169825227|ref|YP_001692838.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
 gi|167832032|dbj|BAG08948.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
          Length = 324

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 104/328 (31%), Positives = 171/328 (52%), Gaps = 10/328 (3%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84
           ++   D   K  E +  ++ +   +  YD+ +++ +++  ++     D+   +  + E+ 
Sbjct: 2   KAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDN--TEEYEKEIS 59

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRK 144
              K + +  +E     L     D  + I+ I AG GG+EA  +   L RMY R+ A +K
Sbjct: 60  KTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIADKK 119

Query: 145 WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATV 204
           +  ++   + + +GG K +   + G   +  +K E GVHR+ R+   +   R HTS A+V
Sbjct: 120 YSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSFASV 179

Query: 205 AVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
            V PE     D+ I  +D++IDT RASG+GGQHVN TDSAVRITHIPTG+ V   +E+SQ
Sbjct: 180 DVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTERSQ 239

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG-RITDH 319
             NR  AM +L A+L  ++ +    +    +    QI  G    +IR+Y F     + DH
Sbjct: 240 IANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWG---SQIRSYVFQPYTLVKDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N    +++ VL G +D  IN  L+ +
Sbjct: 297 RTNCESSQVQDVLDGDLDKFINAYLSHN 324


>gi|119470492|ref|ZP_01613195.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium
           TW-7]
 gi|119446193|gb|EAW27470.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium
           TW-7]
          Length = 283

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 101/284 (35%), Positives = 159/284 (55%), Gaps = 11/284 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D +  D A  E+  + +++  LE    +  +   T D     L++++G+GG+EA
Sbjct: 4   LAIEAEDKDTFDEANAELEGLNEQLESLE----FRRMFSGTHDANDAYLDLQSGSGGTEA 59

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+   + +KVE++ ++D D  G K       G   +  ++ E+GVHR+
Sbjct: 60  QDWCNMLLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFVGEYAYGWLRTETGVHRL 119

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    ++SGR HTS A+  V PE  +  ++DI   D+RID  RASG+GGQHVNTT+SAV
Sbjct: 120 VRKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPSDLRIDVYRASGAGGQHVNTTESAV 179

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           RITH+PT  +V   +E+SQH+N+ +AMK L+A+L+++E ++   E+    + K  IG G 
Sbjct: 180 RITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDAKSDIGWG- 238

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 239 --SQIRSYVLDDSRIKDLRTGVENRNTQSVLDGNLDKFIEASLK 280


>gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
 gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
          Length = 329

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 10/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           +    ++   D   K  E +  ++ +   +  YD+ +++ +++  ++     D+   +  
Sbjct: 2   QQETMKAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDN--TEEY 59

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + E+    K + +  +E     L     D  + I+ I AG GG+EA  +   L RMY R+
Sbjct: 60  EKEISKTLKNLEKNVDEFKIQTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
            A +K+  ++   + + +GG K +   + G   +  +K E GVHR+ R+   +   R HT
Sbjct: 120 IADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHT 179

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V PE     D+ I  +D++IDT RASG+GGQHVN TDSAVRITHIPTG+ V   
Sbjct: 180 SFASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG- 314
           +E+SQ  NR  AM +L A+L  ++ +    +    +    QI  G    +IR+Y F    
Sbjct: 240 TERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWG---SQIRSYVFQPYT 296

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N    +++ VL G +D  IN  L+ +
Sbjct: 297 LVKDHRTNCESSQVQDVLDGDLDKFINAYLSHN 329


>gi|254701680|ref|ZP_05163508.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
 gi|261752232|ref|ZP_05995941.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
 gi|261741985|gb|EEY29911.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
          Length = 321

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 105/317 (33%), Positives = 157/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ I+   Q   +  +L  +  +    S + D  +      ++      +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEI-----D 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     D     LE+ AG GG+E+  +   L RMY R+A     KVEV+   + 
Sbjct: 56  RRQIDMLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS A++ V P     I+
Sbjct: 116 EEAGIKSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V +   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR +A  +L
Sbjct: 176 VQVTEADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+      A    K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEEELKKREEATDAANATKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTNPQE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +   +   L   
Sbjct: 293 VLDGAVTPFMEAALDHR 309


>gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5]
          Length = 320

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +   +Q+  +  +L  +  +    S +++          +  R    
Sbjct: 1   MRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAAR---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 +     D     LE+ +G GG+E+  +   L RMY R+A  +++KVE+L   D 
Sbjct: 57  -RQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS +++ V P     I 
Sbjct: 116 EEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQ 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V    E+SQH+NR +A  +L
Sbjct: 176 IEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDML 235

Query: 274 RARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RAR+Y+ E K+  +  +A    K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARMYEAELKKREDAANAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGVASTAPDD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +++ +   L   
Sbjct: 293 VLDGDLNEFMEAALAHR 309


>gi|257464973|ref|ZP_05629344.1| peptide chain release factor 2 [Actinobacillus minor 202]
 gi|257450633|gb|EEV24676.1| peptide chain release factor 2 [Actinobacillus minor 202]
          Length = 248

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D   C ++++AG+GG+EA  +   L RMY R+A  + +K E++  SD D  G K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   F  ++ E+G+HR+ R    +++ R HTS A   V PE  E  ++++   
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITHIP+ I+V   + +SQHQN+ +AMK L+A+LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSCIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E  +   E+      K  IG G    +IR+Y     RI D R  +     + VL G +D
Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLD 237

Query: 338 DIINPLLTA 346
             I   L A
Sbjct: 238 KFIEASLKA 246


>gi|167470794|ref|ZP_02335498.1| peptide chain release factor 1 [Yersinia pestis FV-1]
          Length = 303

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 140/305 (45%), Positives = 201/305 (65%), Gaps = 9/305 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L+ R  E+   + ++  +   D +  L+ EYA ++ +      +   + 
Sbjct: 1   MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++     D E+R++AQ E+   +    ELE ++  LLLPKD DD++ C LEIR
Sbjct: 61  DIEAAEMML----DDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GD+FRMY RYA  R+WKVE++S+S+ + GGYKEI+A ISG GVF ++K
Sbjct: 117 AGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+P   E +  +I   D+RIDT R+SG+GGQH
Sbjct: 177 FESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQH 236

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSA+RITHIPTGI+V    E+SQH+N+ +AM VL AR+   E ++     ++ R+ 
Sbjct: 237 VNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRN 296

Query: 296 QIGSG 300
            +G+G
Sbjct: 297 LLGTG 301


>gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
 gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
          Length = 359

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 111/353 (31%), Positives = 181/353 (51%), Gaps = 19/353 (5%)

Query: 7   KQICDLKN---------RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
            +I  +K             +I+ ++ +S   + Y  L       S I  K+   ++ + 
Sbjct: 10  DKINKIKEYLDPPKRKKELDDIQKQLEDSSVWNDYQLLQNLKRKQSSIEQKLKTVEELEN 69

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +   L  +      D   +   +  +  + K++ + E             D  + I+ I 
Sbjct: 70  DVDTLLELSEFVEDDESYKQELEDNIKELTKKVEKAET----ETFLSGEHDFSNAIVTIH 125

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           +G GG+E+  +V  LFRMY  +    ++K+EV+     D+ GYK I   +SG   +  +K
Sbjct: 126 SGAGGTESCDWVSMLFRMYSMWCDNNEYKIEVMDLQPGDEAGYKSITFLVSGEKAYGYLK 185

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQH 236
            E+GVHR+ R+   +A+ R HTS A+V+VLPE   + ++DI  +D++IDT RASG+GGQH
Sbjct: 186 NENGVHRLVRISPFDANKRRHTSFASVSVLPEINDDTEIDIDPKDLKIDTFRASGAGGQH 245

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN TDSA+RITHIPTGI+V   +E+SQH+N+  A+K+L+A+LY +E ++   E       
Sbjct: 246 VNKTDSAIRITHIPTGIVVSCQNERSQHKNKAFALKILKAKLYQLEEEKKKKELEKLEGE 305

Query: 296 QIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLE--YVLQGYIDDIINPLLT 345
           +    +   +IR+Y       + DHR  +    +    VL G IDD I   L 
Sbjct: 306 KKKI-EWGSQIRSYVLHPYKMVKDHRTGVEKKDVAALAVLNGEIDDFIREALK 357


>gi|203284000|ref|YP_002221740.1| peptide chain release factor RF-2 [Borrelia duttonii Ly]
 gi|201083443|gb|ACH93034.1| peptide chain release factor RF-2 [Borrelia duttonii Ly]
          Length = 347

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 178/344 (51%), Gaps = 14/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             +K +  + E +++     +   +  E     + + +KI  ++    + +DL  +    
Sbjct: 11  DKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWENLICQLKDLRELCKIA 70

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S+ +   L +      E+    L      L   K+  D  S  L I +G GG+EA  +V
Sbjct: 71  ESEDDKALLERDVNKLREQYKHIL-----TLSYFKEDIDINSAFLTIHSGAGGTEACDWV 125

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+R Y RY+  R +K+E++   +++ GG K +   I G+  +  +K E G+HR+ R+ 
Sbjct: 126 NMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVGIHRLVRIS 184

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V +      +I++ I  EDIR+DT RASG+GGQHVN T SAVRITH
Sbjct: 185 PFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVNKTSSAVRITH 244

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDRSER 305
           + TGI+  + +++SQH+N+  AMKVL+++LY+  +  ++  ++     K  I  G+   +
Sbjct: 245 LKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDISWGN---Q 301

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           IR+Y F     + DHR       +  V+ G ID+ I   L    
Sbjct: 302 IRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWKN 345


>gi|68249758|ref|YP_248870.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP]
 gi|68057957|gb|AAX88210.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP]
 gi|301169953|emb|CBW29557.1| peptide chain release factor 2 [Haemophilus influenzae 10810]
          Length = 283

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 98/285 (34%), Positives = 158/285 (55%), Gaps = 11/285 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D +  + A  E+  +E+++ +LE    +  +     D   C ++++AG+GG+EA
Sbjct: 4   LAIEAEDEDTFNEAVAELDELEQQLEKLE----FRRMFSGEHDACDCYVDLQAGSGGTEA 59

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  + +K E++  SD D  G K     +SG   F  ++ E+G+HR+
Sbjct: 60  QDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRL 119

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAV 244
            R    +++ R HTS +   V PE  +         D+RID  RASG+GGQHVN T+SAV
Sbjct: 120 VRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 179

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           RITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++   ++    + K  IG G 
Sbjct: 180 RITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWG- 238

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 239 --SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 281


>gi|126695538|ref|YP_001090424.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9301]
 gi|126542581|gb|ABO16823.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9301]
          Length = 354

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 94/339 (27%), Positives = 176/339 (51%), Gaps = 6/339 (1%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           LK +  E+E   ++    +   +  ++   +  + +++ + D+ K    D +  +  ++ 
Sbjct: 11  LKAKRRELEQISAQPEFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSL 70

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           + E  +   +E     K++RE  ++  +  L     D +  ++ I AG GG++A  +V  
Sbjct: 71  EPE--EEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEI 128

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+A   +  + +   S  ++ G K +   I G+  +  ++ E G HR+ R+   
Sbjct: 129 LLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPF 188

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            A+G+  TS A V V+P+    I +DIP +D+ I T R+ G+GGQ+VN  ++AVRI H+P
Sbjct: 189 NANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLP 248

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           +GI V  + E+SQ QN+ +AM +L+++L  + +++ A E +   K  I       +IR Y
Sbjct: 249 SGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNY 307

Query: 310 NFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            F   + + D R      +L+ VL G ++  I+ LL  +
Sbjct: 308 VFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRMN 346


>gi|68486252|ref|XP_712983.1| hypothetical protein CaO19.8883 [Candida albicans SC5314]
 gi|46434408|gb|EAK93818.1| hypothetical protein CaO19.8883 [Candida albicans SC5314]
          Length = 394

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 125/350 (35%), Positives = 197/350 (56%), Gaps = 17/350 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   ++    E+  ++++    D  +K    +   + I+S     +   QE  +L  + 
Sbjct: 52  QRAQTIQQEHKELSEKLADKYIPDLQMK----FDNYTNILSMFGKLETLTQEYIELTEIT 107

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D +   E ++  +  V     +I +L +E+   L P     +K CI+E+R G GG+EA+
Sbjct: 108 DDPDLYKEAQEELKSIV---IPQIEKLVSELRVKLRPPVKYANKGCIIELRPGVGGNEAS 164

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF GDL  MY  +A+   WK +++S   N  G   E + +I   G +  M+ ESGVHRVQ
Sbjct: 165 LFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQ 224

Query: 187 RVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           R+P TE  GRVHTS A V VLP+          + +      ++RIDTMRA G GGQHVN
Sbjct: 225 RIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVN 284

Query: 239 TTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVR+ HIPTG+ ++   E+SQ  N+ +A  +LR+RL   E++    ++   R  Q+
Sbjct: 285 TTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQV 344

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTA 346
            S DRS++I+TYN+ + R+TDHRIN +++ LE VL+G  +  +I+   + 
Sbjct: 345 SSTDRSDKIKTYNYKENRVTDHRINYSMHDLEGVLEGRKLGQLIDVYRSQ 394


>gi|226945982|ref|YP_002801055.1| peptide chain release factor 2 [Azotobacter vinelandii DJ]
 gi|226720909|gb|ACO80080.1| peptide chain release factor 2 [Azotobacter vinelandii DJ]
          Length = 280

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 102/284 (35%), Positives = 154/284 (54%), Gaps = 11/284 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +    +D    +    EV  +   + +LE    +  +     D ++  L+++AG+GG+EA
Sbjct: 1   MAVEENDEGAANDVAAEVERLRGILEKLE----FRRMFSGEMDARNAYLDVQAGSGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A    +  E++  S+ +  G K     + G   F  ++ E GVHR+
Sbjct: 57  QDWANMLLRMYLRWADKHGFDTEIVELSEGEVAGIKSATVHVRGEYAFGWLRTEIGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    ++  R HTS + V   PE    I++DI   D+R+DT R+SG+GGQHVNTTDSAV
Sbjct: 117 VRKSPFDSGNRRHTSFSAVFASPEVDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM--ANERSANRKLQIGSGD 301
           RITH+PT  +V   +E+SQH NR RAMK+LRA+LY++E  +   A +   + K  IG G 
Sbjct: 177 RITHLPTNTVVSCQNERSQHANRDRAMKMLRAKLYELEVMKRNVAAQALEDTKSDIGWG- 235

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y   Q RI D R  +     + VL G +D+ I   L 
Sbjct: 236 --HQIRSYVLDQSRIKDLRTGIENSNCDAVLDGDLDEFIEASLK 277


>gi|163843187|ref|YP_001627591.1| peptide chain release factor 2 [Brucella suis ATCC 23445]
 gi|163673910|gb|ABY38021.1| peptide chain release factor 2 [Brucella suis ATCC 23445]
          Length = 321

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 157/317 (49%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ I+   Q   +  +L  +  +    S +    +      ++      +
Sbjct: 1   MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEGAEKTIRDLKDEI-----D 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     D     LE+ AG GG+E+  +   L RMY R+A     KVEV+   + 
Sbjct: 56  RRQIDMLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G+  +  +K ESGVHR+ R+   +++ R HTS A++ V P     I+
Sbjct: 116 EEAGIKSATILVKGQNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           V +   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR +A  +L
Sbjct: 176 VQVTEADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSML 235

Query: 274 RARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+      A    K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEEELKKREEATDAANATKTDIGWG---HQIRSYVLQPYQLVKDLRTGVESTNPQE 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +   +   L   
Sbjct: 293 VLDGAVTPFMEAALAHR 309


>gi|33860740|ref|NP_892301.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33633682|emb|CAE18639.1| peptide chain release factor RF-2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 373

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 96/343 (27%), Positives = 172/343 (50%), Gaps = 6/343 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +L  +  E+E   ++           +    +  +  ++ + D+ K    D    + 
Sbjct: 26  DVPNLVAKKKELEQIAAQPEFWGNQADAKKHMLNLDDVRDQLQLLDKWKMFISDAEASLE 85

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            ++ + E  +   +E       +RE  ++  +  L     D ++ I+ I AG GG++A  
Sbjct: 86  LYSLEPE--EEMIVESHQGLVTLRENLDKWEFQRLLCGEYDKEAAIVSINAGAGGTDAQD 143

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +V  L RMY R+       +E+   SD ++ G K +   ++G+  +  ++ E G HR+ R
Sbjct: 144 WVEILLRMYSRWVDNNGMSLEITDLSDGEEAGIKSVTFEVNGKYAYGYLQNEKGTHRLVR 203

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +    A+G+  TS A V V+P+    I +DIP +D+ I T R+ G+GGQ+VN  ++AVRI
Sbjct: 204 ISPFNANGKRQTSFAGVEVMPKLDQSISLDIPDKDLEITTSRSGGAGGQNVNKVETAVRI 263

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+P+GI V  + E+SQ QN+ +AM +L+A+L  + +++ A+E S   K  I       +
Sbjct: 264 VHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRASEISDI-KGDIVEAAWGNQ 322

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           IR Y F   + + D R       L+ VL G +D  I+ LL  +
Sbjct: 323 IRNYVFHPYQMVKDLRTMKETNDLDAVLNGGLDQFIHELLRMN 365


>gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
 gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
          Length = 329

 Score =  188 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 171/333 (51%), Gaps = 10/333 (3%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           +    +    D   K    +  ++ I + +  YD+ +++ +++  ++     D+   +  
Sbjct: 2   QQETLKQGFWDDSDKAQAIFDELNSIKADVENYDEIEEKIEEVKMMLEISKEDN--TEEY 59

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           + E+    K + E  +E     L     D  + I+ I AG GG+EA  +   L RMY R+
Sbjct: 60  EKEISKTLKSLEEKVDEFKIKTLLVGEYDKNNAIMSIHAGAGGTEAQDWAEMLLRMYTRW 119

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
            A +K+  ++   + + +GG K +   + G   +  +K E GVHR+ R+   +   R HT
Sbjct: 120 IADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHT 179

Query: 200 SAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V PE     ++ I  +D+++DT RASG+GGQHVN TDSAVRITHIPTG+ V   
Sbjct: 180 SFASVDVFPEIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQ 239

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYNFSQG- 314
           +E+SQ  NR  AM +L A+L  ++ +    +    +    QI  G    +IR+Y F    
Sbjct: 240 TERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWG---SQIRSYVFQPYT 296

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + DHR N    +++ VL G +D  IN  L+ +
Sbjct: 297 LVKDHRTNFESSQVQDVLDGDLDKFINAYLSHN 329


>gi|111220808|ref|YP_711602.1| peptide chain release factor 2 [Frankia alni ACN14a]
 gi|111148340|emb|CAJ60012.1| peptide chain release factor RF-2 [Frankia alni ACN14a]
          Length = 369

 Score =  188 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 14/347 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R  E+E + ++        +       +S     IS  +  ++          
Sbjct: 27  DVEGLRRRAEELERQAADPDLWSDQDRAQVVTRRLSSTRGDISRVEGLRRRLD------D 80

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
              +     D    E  A    +    + +    L     D++  I+++ AG GG +AA 
Sbjct: 81  IAAAADLGDDDLLAEAAADLPALNGDISALEVRTLLSGEFDERDAIVQLSAGAGGVDAAD 140

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +  EV  +S+ ++ G K     +     +  ++ E GVHR+ R
Sbjct: 141 WTAMLLRMYLRWAERHGYPTEVFDTSEAEEAGLKSATFQVKAPYAYGTLRSEHGVHRLVR 200

Query: 188 VPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V V P       VDI  +D+RID  R+SG GGQ VNTTDSAVRI
Sbjct: 201 ISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQGVNTTDSAVRI 260

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           TH+PT I+V   +E+SQ QN+  AM VL+A+L +  R   A  +         +  G   
Sbjct: 261 THLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAAKQRITGGPQDVSFG--- 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +IR Y     + + D R +        VL G +D+ I+  +   +A
Sbjct: 318 SQIRNYVLHPYQLVKDLRTDTETSNTGGVLDGELDNFIDAEIRWRRA 364


>gi|12321742|gb|AAG50902.1|AC069159_3 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 524

 Score =  188 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 102/361 (28%), Positives = 171/361 (47%), Gaps = 35/361 (9%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             L  R   +   +++S   D      K++ E+ +++  +  +  ++++  E  D+  + 
Sbjct: 133 KKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLKLA 192

Query: 67  GDHNSDS-----------------------EIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            + N                           +  +   E L    ++R +  E     L 
Sbjct: 193 KEENDSELESVGVLALISQTLGMFSFSVSVSLGMINPKETLKALIDMRRVSKEKELEALL 252

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
              +D  SC +E++AG GG+E+  +   +  MY+ +A  RK+ V V+  +  +  G K  
Sbjct: 253 SADNDPCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRA 312

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLED 221
              ++G   +   K E GVHR+ R+   ++  R HTS A VAV+P        V+I   D
Sbjct: 313 TIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSD 372

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +RI+  R+ G+GGQH NTTDSAVRI HIPTGI     +E+SQH N+  AM VL++RL  +
Sbjct: 373 LRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQL 432

Query: 281 ERKRMANERSANRKL--QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYID 337
           E  R     + + +   +I  G+   +IRTY     R + D R N  +   + VL+G +D
Sbjct: 433 EMARQTAMNAQHTQSLTEISWGN---QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 489

Query: 338 D 338
           +
Sbjct: 490 E 490


>gi|203287543|ref|YP_002222558.1| peptide chain release factor RF-2 [Borrelia recurrentis A1]
 gi|201084763|gb|ACH94337.1| peptide chain release factor RF-2 [Borrelia recurrentis A1]
          Length = 347

 Score =  188 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 177/344 (51%), Gaps = 14/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             +K +  + E +++     +   +  E     + + +KI  +     + +DL  +    
Sbjct: 11  DKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWKNLICQLKDLRELCKIA 70

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            S+ +   L +      E+    L      L   K+  D  S  L I +G GG+EA  +V
Sbjct: 71  ESEDDKAILERDVNKLREQYKHIL-----TLSYFKEDIDINSAFLTIHSGAGGTEACDWV 125

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L+R Y RY+  R +K+E++   +++ GG K +   I G+  +  +K E G+HR+ R+ 
Sbjct: 126 NMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVGIHRLVRIS 184

Query: 190 ATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +A+ + HTS A+V +      +I++ I  EDIR+DT RASG+GGQHVN T SAVRITH
Sbjct: 185 PFDAAKKRHTSFASVFIDPVIDDKIEIIIKSEDIRVDTYRASGAGGQHVNKTSSAVRITH 244

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDRSER 305
           + TGI+  + +++SQH+N+  AMKVL+++LY+  +  ++  ++     K  I  G+   +
Sbjct: 245 LKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDISWGN---Q 301

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
           IR+Y F     + DHR       +  V+ G ID+ I   L    
Sbjct: 302 IRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWKN 345


>gi|149050029|gb|EDM02353.1| rCG37077, isoform CRA_a [Rattus norvegicus]
          Length = 436

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 105/359 (29%), Positives = 179/359 (49%), Gaps = 19/359 (5%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLT-EEYAAISPIISKISIYDQKKQEEQDLHT 64
            K +  L + +  ++  + +    +   + +   +A ++P+++      + +Q  ++L +
Sbjct: 77  QKYMEGLNDEYQSLDQCLQDISEDEGDRRASHRRHAELAPLVAVYQEIQEAEQAIEELES 136

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG----T 120
           +    N   E +    +       + +        L      +      + +       T
Sbjct: 137 MCKSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTT 196

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + W+ E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 197 GGDICQQFTREIFDMYQNYSYYKHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 256

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +   D+R+DT RA G+GGQHV
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPRDLRVDTFRARGAGGQHV 316

Query: 238 NTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           NTTD  V         +    E+SQ +N+  A++VLRARLY    ++   ++   RKLQ+
Sbjct: 317 NTTDRLV---------VECQQERSQLKNKEIALRVLRARLYQQIIEKDKCQQQNARKLQV 367

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           G+  +SERIRTYNF+Q R+TDHRI   +  ++  L+G   +D +I  LL +   + I  
Sbjct: 368 GTRAQSERIRTYNFTQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLLQSADEEAIAE 426


>gi|148703820|gb|EDL35767.1| mitochondrial translational release factor 1, isoform CRA_b [Mus
           musculus]
          Length = 440

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 10/336 (2%)

Query: 6   HKQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +   S +      L   +A ++P+ +      + +Q  ++L +
Sbjct: 95  QKYMEDLNKEYQTLDQCLQGISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELES 154

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++L   E   I+++I  L +E+   L+PK+  D    ILE+ +G  T
Sbjct: 155 LCKSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTT 214

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + WK E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 215 GGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 274

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+R+DT RA G+GGQHV
Sbjct: 275 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHV 334

Query: 238 NTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           NTTDSAVR+ HIPTG++V    E+SQ +N+  A++VLRARLY    ++   ++   RKLQ
Sbjct: 335 NTTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNARKLQ 394

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           +G+  +SERIRTYNF+Q R+TDHRI   +  +  V+
Sbjct: 395 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRDI-KVM 429


>gi|91202802|emb|CAJ72441.1| strong similarity to protein chain release factor 2 (RF-2)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 316

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 103/307 (33%), Positives = 162/307 (52%), Gaps = 13/307 (4%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           +    +  +E + L  ++ D  SD         ++    +++ +LE          +  D
Sbjct: 3   LQELQKTYEEIEFLVDLM-DEESDERTTAEIVGDIALFTQKLEKLELHTM----LGEAHD 57

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
             +  L I AG GG+E+  +V  LFRMY R+A      + ++ S   ++ G K I   I 
Sbjct: 58  HCNAYLSIYAGAGGTESCDWVSMLFRMYSRWAEKNGHTLSLIDSLAGEEAGLKRITVLIE 117

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTM 227
           G  V+  +K E GVHR+ R+   +++ R HTS A V VLP    E +++I   ++++DT 
Sbjct: 118 GEYVYGHLKSEIGVHRLVRISPFDSNARRHTSFAAVDVLPEIEEEEEIEINDNELQVDTY 177

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+SG+GGQHVN T SAVRITH+PTGI++   SE+SQHQNR RA+ +L+A++Y ++ K   
Sbjct: 178 RSSGAGGQHVNKTSSAVRITHLPTGIVIACQSERSQHQNRRRAINMLKAKIYQIKEKEKE 237

Query: 287 NERSA--NRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPL 343
            E SA  + K +I  G+   +IR+Y       + D R        + +L G I+  I   
Sbjct: 238 RELSAAYDEKGEIAWGN---QIRSYVLQPYSLVKDLRTGKESGNTQAMLDGEIEGFIEAY 294

Query: 344 LTAHQAK 350
           L    AK
Sbjct: 295 LKWKMAK 301


>gi|195398186|ref|XP_002057705.1| GJ17953 [Drosophila virilis]
 gi|194141359|gb|EDW57778.1| GJ17953 [Drosophila virilis]
          Length = 393

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 196/354 (55%), Gaps = 12/354 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+  +  +  R++ + +   Y +L+     + P+++ +  +   ++       +  +
Sbjct: 35  LESLRQEYYAL--RVNAAGNSSLYARLSR----LDPVVNSLEKHRALQRNITPEQDLAAE 88

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D     + +   +  E   ++ E  +  LL   D +D  S I E+ AG GG EA LF
Sbjct: 89  KDEDMRAL-MLEENNVYAELLRKQEEAMLQELLALADHEDYPSLIFEVNAGAGGQEAMLF 147

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
             +L+ MY  Y     W+ E  +    D GG +     ++    ++ +++E+GVHRVQRV
Sbjct: 148 AQELYDMYTSYFEHMGWEYEQYAHETTDIGGLRYANLLVNDPEAYNWLRYEAGVHRVQRV 207

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           PATE SGR+HTS A++ V+P  A++ V I   D++I+T RASG+GGQHVNTTDSAVRI H
Sbjct: 208 PATEKSGRMHTSTASITVIPRPADVQVHIAERDLKIETKRASGAGGQHVNTTDSAVRIVH 267

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG+ V + SE+SQ +NR  A+K L+A+L   + +     + A RK Q G+ +R+E+IR
Sbjct: 268 LPTGLAVESQSERSQLKNRELALKRLQAKLMQQQLESSEATKQATRKAQQGNLNRNEKIR 327

Query: 308 TYNFSQGRITDHRI--NLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSASE 357
           TYNF Q R+TDHR+    T + L   L+G   + D+I  L    +   +    E
Sbjct: 328 TYNFVQDRVTDHRVQQGGTQHNLSGFLEGGQPLSDLIERLHLEQRKLKLVELIE 381


>gi|158300556|ref|XP_320444.4| AGAP012082-PA [Anopheles gambiae str. PEST]
 gi|157013216|gb|EAA00433.4| AGAP012082-PA [Anopheles gambiae str. PEST]
          Length = 384

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 131/356 (36%), Positives = 195/356 (54%), Gaps = 13/356 (3%)

Query: 4   LSHKQICDLKNRFAEIE---LRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +S  +I     R   +E   L++ E  +     ++      +S ++              
Sbjct: 25  ISDDKIQKYLERLR-LEYYALKVQEQRTRKDIQRML----LLSNVVEMYEQRKIIVDNLS 79

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            L  +  D   D  ++ L +          R     +N +L   D +D  S I+E+ AG 
Sbjct: 80  SLKEL-KDDKDDEMVQLLKEEREAYGSILFRLDSEILNGILSMDDEEDYGSLIMEVTAGV 138

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EA LF  +LF MY  Y   + W+VE+L + + D GG +     ISG   +  +K E 
Sbjct: 139 GGQEAMLFARELFDMYCGYVEYKGWEVEMLQTENTDIGGTRHATTVISGPDAYRYLKHEG 198

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQR+PATE SGR+HTS  TV+++P   +  V++  +D++I+T RASG+GGQHVNTT
Sbjct: 199 GVHRVQRIPATEKSGRIHTSTVTVSIIPRPDDFQVELKEKDLKIETKRASGAGGQHVNTT 258

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           DSAVRI H+PTGI V   +E+SQ +NR  A + L A+L  +E +   +   A +K Q+G 
Sbjct: 259 DSAVRIVHLPTGIAVECQTERSQQKNREIAKQKLTAKLMQIELEARFSSTQALKKSQVGQ 318

Query: 300 GDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQG--YIDDIINPLLTAHQAKMI 352
             R+E+IRTYNF+Q RITDHRI   T + L+  L+G   +DD+I  L  + + K +
Sbjct: 319 SLRNEKIRTYNFNQDRITDHRIEGGTAHNLKGFLEGGEQLDDMIEKLRRSQRRKQL 374


>gi|296387792|ref|ZP_06877267.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           PAb1]
          Length = 248

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 95/249 (38%), Positives = 141/249 (56%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A    +   ++  S+ +  G K
Sbjct: 1   MFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS   V V PE  +  +++I   
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA+LY+
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 180

Query: 280 VERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           +E ++   A++   + K  IG G    +IR+Y   Q RI D R  +     + VL G +D
Sbjct: 181 LEMQKRTAASQALEDSKSDIGWG---HQIRSYVLDQSRIKDLRTGIERSDCDKVLDGDLD 237

Query: 338 DIINPLLTA 346
           + +   L  
Sbjct: 238 EYLEASLKQ 246


>gi|253581892|ref|ZP_04859116.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
 gi|251836241|gb|EES64778.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
          Length = 328

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 107/331 (32%), Positives = 166/331 (50%), Gaps = 11/331 (3%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84
           E    +     +     ++     I+ + + + E  +   +I               E  
Sbjct: 4   EESFWNDKRSSSAVIKEMNEEKEIIAEFKKLESEVGEEEVLIDFVEMGETDFQAELEEKH 63

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRK 144
            I  +     +  +  LL     D  + I+ I +G GG+EA  +   L+RMY R+   +K
Sbjct: 64  MILGKD---IDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKK 120

Query: 145 WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATV 204
           +K+  +     D  G K I   + G   +  MK E G+HR+ R+   +A+ + HTS A+V
Sbjct: 121 YKISEMDFMPGDSVGIKSITFLVEGSNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASV 180

Query: 205 AVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
            V+PE  E  +V++   D+RIDT RASG+GGQHVN TDSAVRITHIPTGI+V    E+SQ
Sbjct: 181 EVMPEVDESVEVNVDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQ 240

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQG-RITDH 319
             NR  AMK+L+++L ++E K+   E       + +IG G+   +IR+Y F     + DH
Sbjct: 241 LNNRETAMKMLKSKLIELEMKKKEEELKKIQGEQSEIGWGN---QIRSYVFQPYTLVKDH 297

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R       ++ V+ G ID  IN  L  ++ K
Sbjct: 298 RTAAESGNIKAVMDGDIDIFINTYLRWNKTK 328


>gi|254513973|ref|ZP_05126034.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
 gi|219676216|gb|EED32581.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
          Length = 280

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 103/284 (36%), Positives = 153/284 (53%), Gaps = 11/284 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +    +D       ++E+  + K +  LE    +  +     D  +  L+I++G+GG+EA
Sbjct: 1   MASEENDEAAVSDLELEIQGLLKVLELLE----FRRMFNGEMDANNAFLDIQSGSGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+   R +  E++ +S  D  G K      SG   F  ++ E+GVHR+
Sbjct: 57  QDWAEMLLRMYLRWGESRGFTTELIEASGGDVAGIKSATIKFSGEYAFGWLRTETGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    ++  R HTS A+V V       I+++I   D+R+DT RASG+GGQHVN TDSAV
Sbjct: 117 VRKSPFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           R+TH P+GI+V   +E+SQHQNR  AMK+LR +LY++E  +   E+    + K  IG G 
Sbjct: 177 RLTHNPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEVLKRNAEKQVMEDNKADIGWG- 235

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y     RI D R N+     + VL G ID  I   L 
Sbjct: 236 --SQIRSYVLDASRIKDLRTNVETSNTQAVLDGAIDQFIEASLK 277


>gi|218682869|ref|ZP_03530470.1| peptide chain release factor 2 [Rhizobium etli CIAT 894]
          Length = 267

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 93/245 (37%), Positives = 142/245 (57%), Gaps = 8/245 (3%)

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
             +   LE+ +G GG+E+  +   L RMY R+A  +++KVE+L   D ++ G K     +
Sbjct: 13  RQQRHYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLV 72

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDT 226
            G   +  +K ESGVHR+ R+   +++ R HTS +++ V P     I ++I   D RIDT
Sbjct: 73  KGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDT 132

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            R+SG+GGQHVNTTDSAVRITH+PTGI+V    E+SQH+NR +A  +LRAR+Y+ E K+ 
Sbjct: 133 YRSSGAGGQHVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKR 192

Query: 286 ANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
            +  +A    K  IG G    +IR+Y     + + D R  +     + VL G +++ +  
Sbjct: 193 EDAANAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNEFMEA 249

Query: 343 LLTAH 347
            L   
Sbjct: 250 ALAHR 254


>gi|332375689|gb|AEE62985.1| unknown [Dendroctonus ponderosae]
          Length = 400

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 126/360 (35%), Positives = 200/360 (55%), Gaps = 24/360 (6%)

Query: 6   HKQICDLKNRFAEI---ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
              I  L++ + E+   +  MS    +            + P+I+ I+  D+      DL
Sbjct: 50  KDYIAKLQSEYLELLKVDSYMSNPRCI-----------ELQPVINIITKRDELITNIVDL 98

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP-KDTDDDKSCILEIRAGTG 121
             +    + D ++  LA+ E   +E ++  LE  +   LLP    D   + ILE++AG G
Sbjct: 99  KELAA--SPDKDLAALAKEEETELETKLYHLEETLIDALLPEDREDSFDTIILEVQAGVG 156

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LF  ++F MY  + +L+ WK +++     D GG +     ++G   +   K E G
Sbjct: 157 GQEAMLFAQEMFDMYCSFISLKGWKYDIVDYMGTDLGGIRRGSILVNGSKAYKFFKHEGG 216

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+P+TE S R+HTS  +V  LP+  EID+ I  +D++I+T R++G+GGQHVNTTD
Sbjct: 217 VHRVQRIPSTEKSSRIHTSTVSVTALPQPNEIDIRIDPKDLKIETKRSTGAGGQHVNTTD 276

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI H+PT IMV    ++SQ +NR  A+  LRA LY  E +    ++ + +K Q+ S 
Sbjct: 277 SAVRIVHLPTNIMVECQVDRSQIKNRKLALTKLRALLYQRELEEQLAQQESTKKSQVSSN 336

Query: 301 DRSERIRTYNFSQGRITDHR-INLTLYKLEYVLQ-G-YIDDIINPLLTAHQAKMIGSASE 357
           +R+E+IRTYNF+Q RITDHR   +  + ++  ++ G  ++++   L    +   I S  E
Sbjct: 337 NRNEKIRTYNFNQDRITDHRLSGVHFHNIKMFMETGADLEELNEQL---DRQARISSLLE 393


>gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB]
 gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus
           aciditrophicus SB]
          Length = 279

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 103/285 (36%), Positives = 154/285 (54%), Gaps = 9/285 (3%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  + N +  +  ++       +             ++     D  + I+ I AG GG+E
Sbjct: 1   MAKEENDEEALEAISNDIESLRKSVRE-----SELKMMLGSEQDPMNAIVSIHAGAGGTE 55

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +V  L RMY R+A  R +K  ++     D+ G K +  TI G   +   K E G+HR
Sbjct: 56  AQDWVEMLLRMYLRWAEKRGFKTTIIDYLPGDEAGVKSVSFTIEGEYAYGYAKAEIGIHR 115

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +AS R HTS A+V V PE   EI V+I  +D+RIDT R++G+GGQHVN TDSA
Sbjct: 116 LVRISPFDASSRRHTSFASVFVYPEVNDEIVVEIDEKDLRIDTYRSTGAGGQHVNKTDSA 175

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRITH+PTGI+V   +E+SQH+N+  AMK LR+RLY+++ +    + S   K +      
Sbjct: 176 VRITHMPTGIVVQCQNERSQHKNKAMAMKYLRSRLYELKIQEQNEKLSEINKTK-KDIAW 234

Query: 303 SERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y       + DHR N+ +  +  VL G IDD+I   L  
Sbjct: 235 GSQIRSYVLQPYKMVKDHRTNIEIGNVGRVLDGDIDDLIEAYLLQ 279


>gi|195472530|ref|XP_002088553.1| GE18626 [Drosophila yakuba]
 gi|194174654|gb|EDW88265.1| GE18626 [Drosophila yakuba]
          Length = 392

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 123/324 (37%), Positives = 183/324 (56%), Gaps = 5/324 (1%)

Query: 38  EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEI 97
             A +  ++S +      ++       +  + + D     + +   + ++   ++ +  +
Sbjct: 58  RLAQLEGVVSALEQRRVLERHITSAKDMEAEKDED-MRELMREENEVYVDLLGKQDQALL 116

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
             LL   D +   + I  + AG GG EA LF  +L+ MY  Y     W  E  +    D 
Sbjct: 117 QELLTLSDDEQYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFDHMGWNWEEFAGESTDI 176

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           GG +     +SG   F  ++FE+GVHRVQRVPATE SGR+HTS A++ V+P  A+I V I
Sbjct: 177 GGLRHASLMVSGEDAFRWLRFEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADIQVHI 236

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +D++I+T RASG+GGQHVNTTDSAVRI H+PTG+ V   SE+SQ +NR  AMK LR+R
Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQG- 334
           L   + + +   + A +K Q GS +R+E+IRTYNF Q RITDHRI   TL+ L+  L+G 
Sbjct: 297 LVQQQLESVEANKMATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTLHNLDGFLKGG 356

Query: 335 -YIDDIINPLLTAHQAKMIGSASE 357
             +  +I  L   H+ + +    E
Sbjct: 357 DQLSGLIEKLQMEHRKERLKELLE 380


>gi|189502408|ref|YP_001958125.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497849|gb|ACE06396.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 332

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 8/335 (2%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
             + E +       +   +       +    S I  +D  +   ++L      + +    
Sbjct: 2   LQDQEAKSLAPDFWENTSQAEVILRNLKITKSWIDAFDHVESLLENLEVTQLFYEAGDVD 61

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
               +     +   +  LE       + ++ +D+ S I+EI  G GG+E+  +   L RM
Sbjct: 62  ETEVEKAYQNLLTGLEALEV----RKMLQNEEDENSAIIEINPGAGGTESQDWAEMLTRM 117

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y  +     + V+ L+    D  G K     I+G   +  +K E G+HR+ R+   +A+G
Sbjct: 118 YIMWGEKHNYTVKELAYQRGDVAGVKSATLEITGTFAYGYLKSEIGIHRLVRISPFDAAG 177

Query: 196 RVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           + HTS A++ V P     I +DI   DI  DT RA G+GGQ+VN  ++AVR+ H P+GI+
Sbjct: 178 KRHTSFASIYVYPVVENNIQIDINPADITWDTFRAGGAGGQNVNKVETAVRLKHAPSGII 237

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V    E+SQ QN+ +A+++L+++LY +E  +   E+      +    D   +IR Y    
Sbjct: 238 VECQQERSQAQNKEKALRILKSKLYQLELDKRNAEKEKMESSK-KRIDFGSQIRNYVLHP 296

Query: 314 GR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + + D+R ++       VL G ID+ I   L  +
Sbjct: 297 YKLVKDNRTDVETSDTSGVLNGNIDEFIKAYLMHY 331


>gi|313147825|ref|ZP_07810018.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12]
 gi|313136592|gb|EFR53952.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12]
          Length = 337

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 19/341 (5%)

Query: 22  RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           R       D   K   +   +  +   I  Y++ K    +L      +  +         
Sbjct: 2   RTQAPGFWDDQKKAEAQMKLVKGLQKWIDGYNEVKTLADELELAFDFYKDELVTEQEVDE 61

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
                 + +  LE +       +D  D  SC+L+I +G GG+E+  +   L RMY RYA 
Sbjct: 62  AYAKALEHVENLELQNM----LRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAE 117

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
              +K  + +  + D+ G K     I G   +  +K E+GVHR+ RV    A G+  TS 
Sbjct: 118 TNGYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSF 177

Query: 202 ATVAVLPEAAEIDVDIPLEDI-RIDTMRASGSGGQHVNTTDSAVRITHIPTG-------- 252
           A+V V P   +      L      DT R+ G+GGQ+VN  +S VR+ +            
Sbjct: 178 ASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEE 237

Query: 253 -IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTY 309
            ++  +  + Q +NR  AM+ LR+ LYD E +    E++     K +I  G    +IR+Y
Sbjct: 238 ILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSY 294

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            F   R+ DHR N     +  V+ G I+  I   L    ++
Sbjct: 295 VFDDRRVKDHRTNFQTSDVNGVMDGKIEGFIKAYLMEFSSE 335


>gi|163868347|ref|YP_001609556.1| peptide chain release factor 2 [Bartonella tribocorum CIP 105476]
 gi|161018003|emb|CAK01561.1| peptide chain release factor RF-2 [Bartonella tribocorum CIP
           105476]
          Length = 321

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 108/317 (34%), Positives = 162/317 (51%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +  + +  +E  +L  +  + +    I D          +  +    
Sbjct: 1   MRERQRLDDSINGLLSFTKTLEECIELIAMGEEESDVEIIADAENSIRHLKSEIDK---- 56

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                +L     D     LE+ AG GG+E+  +   L RMY R+A   + KVEVL   D 
Sbjct: 57  -RQIDVLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHEMKVEVLEIHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ + HTS A++ V P     I+
Sbjct: 116 EEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           VD+   D+RIDT RASG+GGQHVNTTDSAVRITHI TGI+V   +E+SQH+NR  A  +L
Sbjct: 176 VDVSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSML 235

Query: 274 RARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RARLY+ E K+   E +   + K +IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARLYEEELKKREEETNAVESSKTEIGWG---HQIRSYVLQPYQLVKDLRTGIENTDPQS 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +D  I   L+  
Sbjct: 293 VLNGNLDAFIEAALSQR 309


>gi|307566238|ref|ZP_07628684.1| putative peptide chain release factor 2 [Prevotella amnii CRIS
           21A-A]
 gi|307345042|gb|EFN90433.1| putative peptide chain release factor 2 [Prevotella amnii CRIS
           21A-A]
          Length = 374

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 161/373 (43%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNR----------------FAEIELRMSESPSVDAYIKLTEEYAAISPII 46
            ++  Q+ D+ +R                F E +LR       ++     ++   +  I 
Sbjct: 1   MITSDQLKDILSRVESLKRYLGIDKKRIEFEEEQLRTQAPDFWESPDYARQQMKKVKEIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  YD+ K + ++L      +       D        +   I +LE       + +  
Sbjct: 61  RWVKGYDKAKAQAEELQLAFDFYKDKLVTEDEVDTMYNKVVSTIEDLEL----KNMLRQE 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+++I +G GG+E+  +   L RMY R+     +KV +      D+ G K +   
Sbjct: 117 EDPMECVMKINSGAGGTESQDWAEMLMRMYMRWGEAHGYKVTISDILSGDEAGIKSVTMK 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRI 224
                  +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 FESGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           DT R+SG+GGQ+VN  +S VR+ +             ++  +  + Q +NR +AM++L++
Sbjct: 237 DTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEKEEILIENTETRDQPKNRAKAMQLLKS 296

Query: 276 RLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LY+ E K+    ++     K +I  G    +IR+Y F   R+ DHR N     +E V+ 
Sbjct: 297 QLYNREMKKRMEAQAKVEAAKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTSDVEGVMN 353

Query: 334 GYIDDIINPLLTA 346
           G IDD I   L  
Sbjct: 354 GKIDDFIKAYLME 366


>gi|289615662|emb|CBI57583.1| unnamed protein product [Sordaria macrospora]
          Length = 436

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 121/376 (32%), Positives = 193/376 (51%), Gaps = 34/376 (9%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI-KLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           ++   L     ++  ++        Y     +    IS +++ +   D+ K    +LH +
Sbjct: 45  ERARKLAAEHQQLTKQLES-----DYEPAAAKRAGEISKVVAALQELDKAKAALDELHGL 99

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +   + D+E+R LA  ++ A +K +  L   ++  L PK    D  C++E+  G GG+E 
Sbjct: 100 LK--SDDAELRQLANDDLDATKKHLETLGTNLSATLTPKHPFADMPCLIELHPGPGGTEG 157

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDND--------DGGYKEIVATISGRGVFSRMK 177
             F   LFRMY++Y   + +   VLS  + +        +    E V  ++  G F+  +
Sbjct: 158 RHFADTLFRMYQKYCENKGYTARVLSYQEAEDRTPGLDGEVPISEAVLEVTDPGAFAAFR 217

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-------------IPLEDIRI 224
            E+G+HRVQR+PATE  GR HTSA  V VLP   E   D             I   +++ 
Sbjct: 218 GEAGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYIDPTEVKS 277

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERK 283
           + MRASG+GGQHVN T+SA+R+THIPTGI V+    +SQ QNR +A ++LR+R+  + R+
Sbjct: 278 EKMRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQSQNREKAWRLLRSRIASLRRE 337

Query: 284 RMANERSANRKLQIGS--GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDI 339
           +   +    R   +      R ++IRTYN+ Q R TDHR  L ++ L  VLQG   +D +
Sbjct: 338 QRDAQAKDLRDSVLSQAQMSRGDKIRTYNYQQDRCTDHRSGLDVHNLPNVLQGGEILDKV 397

Query: 340 INPLLTAHQAKMIGSA 355
           IN + +   A  I + 
Sbjct: 398 INSVQSWLTAMDIQNL 413


>gi|260063027|ref|YP_003196107.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
 gi|88784596|gb|EAR15766.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
          Length = 313

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 8/315 (2%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   +  ++  +    DL  ++  H +     +     +      I +LE    
Sbjct: 1   MKRLDTLKGWVEEFETAESLLSDLEVMVEFHEAGEVAEEEVARHLKRATDAIEKLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  D  DD + +L+I AG GG+E+  +   L RMY  ++    +KV  L+  + D  
Sbjct: 57  FRNMLSDEGDDLTAVLQITAGAGGTESCDWASMLMRMYMMWSEKNGYKVRELNYQEGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I+++I
Sbjct: 117 GIKTVTLEIEGPFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              DI I T R+SG+GGQ+VN  ++ V++ H PTGI +  S  +SQH NR  A+K+L+++
Sbjct: 177 NPADIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQISCSDSRSQHDNRATALKMLKSQ 236

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           LY++E ++    R A    ++   +   +IR Y     + + D R       ++ V+ G 
Sbjct: 237 LYEIELRKKQEAREAIESSKMK-IEWGSQIRNYVMHPYKLVKDVRTGEETGNVDAVMDGE 295

Query: 336 IDDIINPLLTAHQAK 350
           I+D +   L     +
Sbjct: 296 INDFLKAFLMMTGQE 310


>gi|158336840|ref|YP_001518014.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
 gi|158307081|gb|ABW28698.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
          Length = 304

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 9/307 (2%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           ++++  +     + + L  ++        +++ A       ++  +          L   
Sbjct: 1   MTQLQDWQGTLDDAEALVELLQLEEDAGLLQEAAGNLRQLNQQLDQW-----ELQQLLSG 55

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D    +L I  G GG++A  +   L RMY R++  + +KV +   S+ D+ G K    
Sbjct: 56  PYDKVGAVLTINTGAGGTDAQDWAEMLLRMYTRWSERQGYKVHLAELSEGDEAGIKSATL 115

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + GR  +  +K E G HR+ R+    A+G+  TS A + V+P+     ++DIP  D+ I
Sbjct: 116 EVEGRYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPQLDHEVELDIPDTDLEI 175

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
            T R+ G GGQ+VN  ++AVRI H+PTG+ V  + E+SQ QN+ +AM +L+A+L  + ++
Sbjct: 176 TTSRSGGKGGQNVNKVETAVRIVHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQE 235

Query: 284 RMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
           + A E +  R   +       +IR Y F   + + D R N     +E V+ G +D+ I  
Sbjct: 236 QKAKEIADIRGDAVE-AAWGNQIRNYVFHPYQMVKDLRTNQETTAIESVMDGALDNFIEA 294

Query: 343 LLTAHQA 349
            L     
Sbjct: 295 YLRQENQ 301


>gi|86357282|ref|YP_469174.1| peptide chain release factor 2 [Rhizobium etli CFN 42]
 gi|86281384|gb|ABC90447.1| peptide chain release factor 2 protein [Rhizobium etli CFN 42]
          Length = 322

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 161/317 (50%), Gaps = 13/317 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   ++ +   +Q+ ++             + E  +    E     K ++    
Sbjct: 1   MRERQQLDDGVNGVRQLEQQLKDNV-----ELVELGEEEGDEGIVKEAEDALKALKAEAA 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 +     D     LE+ +G GG+E+  +   L RMY R+A  +++KVE+L   D 
Sbjct: 56  RRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           ++ G K     + G   +  +K ESGVHR+ R+   +++ R HTS +++ V P     I+
Sbjct: 116 EEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIN 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +DI   D RIDT R+SG+GGQHVNTTDSAVRITHIPTGI+V    E+SQH+NR +A ++L
Sbjct: 176 IDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEML 235

Query: 274 RARLYDVERKRM--ANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RAR+Y+ E K+   A    A  K  IG G    +IR+Y     + + D R  +     + 
Sbjct: 236 RARMYEAELKKREEAANAEAASKTDIGWG---HQIRSYVLQPYQLVKDLRTGVASTAPDD 292

Query: 331 VLQGYIDDIINPLLTAH 347
           VL G +++ +   L   
Sbjct: 293 VLDGDLNEFMEAALAHR 309


>gi|120436153|ref|YP_861839.1| peptide chain release factor 2 [Gramella forsetii KT0803]
 gi|117578303|emb|CAL66772.1| peptide chain release factor 2 [Gramella forsetii KT0803]
          Length = 333

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 90/330 (27%), Positives = 164/330 (49%), Gaps = 8/330 (2%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +       D   K  +    ++   S +  Y++ +   +DL  +   +  D    +  
Sbjct: 2   EEKTFAPDFWDDPKKAEQIMKEVNAEKSWVGDYEKAETLVEDLEVIYDFYKEDEATAEDV 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           Q       + I +LE    +  +  +  D  S +L+I AG GG+E+  +   L RMY  +
Sbjct: 62  QQRNDKAVELIEDLE----FKNMLSEEGDSMSAVLQITAGAGGTESCDWAEMLMRMYLMW 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  RK+K+  L+    D  G K +   I G   F  +K E+GVHR+ R+   +++ + HT
Sbjct: 118 AEKRKYKIRELNYQAGDVAGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHT 177

Query: 200 SAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-S 257
           S A+  + P     I++DI   D+  +TMR+SG+GGQ+VN  ++AVR+ H PTGI++  S
Sbjct: 178 SFASAYIYPLVDDSIEIDINPSDLSWETMRSSGAGGQNVNKVETAVRLRHEPTGIVIENS 237

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-I 316
             +SQ +N+ +AM++L+++L+++E ++   +R      ++   +   +IR Y     + +
Sbjct: 238 ETRSQLENKNKAMQLLKSQLFEIELQKKQEQRREIEDSKMK-IEWGSQIRNYVMHPYKLV 296

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            D R       ++ V+ G ID  +   L  
Sbjct: 297 KDVRTAEETGNVDDVMNGNIDAFLKSFLMM 326


>gi|241954572|ref|XP_002420007.1| peptide chain release factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223643348|emb|CAX42223.1| peptide chain release factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 392

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 194/347 (55%), Gaps = 17/347 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   ++    E+  ++++    D  +K    +   + I+S     +   QE  +L  + 
Sbjct: 50  ERAQTIQQEHKELSEKLADKYIPDLQVK----FDNYTNILSMFGKLETLTQEYIELTEIT 105

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D     E ++  +  V     +I +L +E+   L P     DK CI+E+R G GG+EA+
Sbjct: 106 DDPGLYKEAQEELKSIV---IPQIEKLVSELTVKLRPPVKYADKGCIIELRPGVGGNEAS 162

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF GDL  MY  +A+   WK +++S   N  G   E + +I   G +  M+ ESGVHRVQ
Sbjct: 163 LFTGDLLNMYINFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQ 222

Query: 187 RVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           R+P TE  GRVHTS + V VLP+          + +      ++RIDTMRA G GGQHVN
Sbjct: 223 RIPETETKGRVHTSTSAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVN 282

Query: 239 TTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVR+ HIPTG+ ++   E+SQ  N+ +A  +LR+RL   E++     +   R  Q+
Sbjct: 283 TTDSAVRLVHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEILRQKKLRTDQV 342

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPL 343
            S DRS++I+TYN+ + R+TDHRIN +++ L+ VL+G  +  +I+  
Sbjct: 343 SSTDRSDKIKTYNYKENRVTDHRINYSMHDLQGVLEGRKLGQLIDTY 389


>gi|317486373|ref|ZP_07945201.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6]
 gi|316922362|gb|EFV43620.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6]
          Length = 329

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 114/325 (35%), Positives = 164/325 (50%), Gaps = 13/325 (4%)

Query: 37  EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEV-----LAIEKEIR 91
            E + +   + ++           D   +  + +  +EI++            A  + + 
Sbjct: 3   REKSRLEAELDRLDTLKNCHASMLDWQEMAQELSGGAEIKEGGDAAEALESLSAEIERLT 62

Query: 92  ELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS 151
           EL  E    LL    +D    ILEI  G GG+EA  +   L RMY R+A    + VE L 
Sbjct: 63  ELLEETETNLLLSSEEDHADAILEIHPGAGGTEAQDWAQMLQRMYLRWADSHGFSVEELD 122

Query: 152 SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA- 210
               D+ G K +   ISG  V+  +K E G+HR+ R+   ++SGR HTS A+V V+P+A 
Sbjct: 123 FLPGDEAGIKSVSLRISGENVYGFLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDAG 182

Query: 211 AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRA 269
            +I+++I   D+R+D   ASG GGQ VNTT SAVRITHIP+GI V   +E+SQH N+  A
Sbjct: 183 DDIEIEIKESDLRVDIFCASGPGGQGVNTTYSAVRITHIPSGISVQCQNERSQHHNKDSA 242

Query: 270 MKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLY 326
           M++LR RLYD+E  +    R A    K  I  G    +IRTY     R + DHR N  + 
Sbjct: 243 MRILRGRLYDLELSKRDAARQAEYAGKNAISFG---SQIRTYTLQPYRLVKDHRNNCEIG 299

Query: 327 KLEYVLQGYIDDIINPLLTAHQAKM 351
             + VL G ID ++   L       
Sbjct: 300 DTDAVLDGRIDKLLRDYLLWQHTNR 324


>gi|197123211|ref|YP_002135162.1| LigA [Anaeromyxobacter sp. K]
 gi|196173060|gb|ACG74033.1| LigA [Anaeromyxobacter sp. K]
          Length = 372

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 169/346 (48%), Gaps = 16/346 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLHT 64
            +   + R AEI     +       +K     +E A +  +    +   +   + Q L  
Sbjct: 24  DVERKELRVAEISKLSEDPAFWTDNVKAQALLKEKAQLEQVTQACAAVRRALDDAQALSE 83

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  +   D+  R  A     A+ +++  LE +           D    I+E+++G GG E
Sbjct: 84  LAEEARDDA-TRAEAAEAAEAVGRQLEGLELQKM----LSGPHDAAGAIVEVKSGAGGVE 138

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L+RMY RY   R W+VE       ++ G       + G   +  +K E GVHR
Sbjct: 139 AMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWLKAEKGVHR 198

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   + + R  TS A V V PE  +   +DI   D+RIDT R+SG+GGQ VN TDSA
Sbjct: 199 LVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGGQKVNKTDSA 258

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSG 300
           VR+TH+PTGI+V   +E+SQ +NR  A K+LRA+LYD+E K+ A  R A    K  I   
Sbjct: 259 VRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAEALKKDI--- 315

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           D   +IR+Y     + + D R  +   K++ VL G +D  I P L 
Sbjct: 316 DFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 361


>gi|288801053|ref|ZP_06406509.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 299 str. F0039]
 gi|288331987|gb|EFC70469.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 299 str. F0039]
          Length = 373

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 157/373 (42%), Gaps = 36/373 (9%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
            ++ +Q+ D++ R   +                +LR       D   +  E+   +  I 
Sbjct: 1   MITAEQLKDIQERADALHAYLNIEEKKVEFEEEQLRTQAPDFWDDVERAQEQMKKVKGIE 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             +  Y + +    +L       + +               + +  LE         +  
Sbjct: 61  KWLVGYKEVRLLADELQLSFDFFHDEMVSESEVDETYKKALQAVEALELMNM----LRQK 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D   C+L+I +G GG+E+  +   L R+Y R+A     KV + +  + D+ G K +   
Sbjct: 117 EDPMDCVLKINSGAGGTESQDWASMLMRLYMRWAESHGHKVTISNLQEGDEAGIKSVTME 176

Query: 167 ISG-RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI-PLEDIRI 224
           I G    +  +K E+GVHR+ RV    A G+  TS A+V V P   +          +  
Sbjct: 177 IEGGEFAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSW 236

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLRA 275
           D  R+ G+GGQ+VN  ++ VR+ +  T          ++  +  + Q +NR  AM++L++
Sbjct: 237 DLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGVEEEILIENTESRKQLENRNNAMRLLKS 296

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LYD   K+    ++     K +I  G    +IR+Y F   R+ DHR N     ++ V+ 
Sbjct: 297 QLYDRAMKKRLEAQAKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTTDVDGVMN 353

Query: 334 GYIDDIINPLLTA 346
           G ID+ I   L  
Sbjct: 354 GKIDEFIKAYLME 366


>gi|148703821|gb|EDL35768.1| mitochondrial translational release factor 1, isoform CRA_c [Mus
           musculus]
          Length = 436

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 121/359 (33%), Positives = 197/359 (54%), Gaps = 19/359 (5%)

Query: 6   HKQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + DL   +  ++  +   S +      L   +A ++P+ +      + +Q  ++L +
Sbjct: 77  QKYMEDLNKEYQTLDQCLQGISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELES 136

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++L   E   I+++I  L +E+   L+PK+  D    ILE+ +G  T
Sbjct: 137 LCKSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTT 196

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG     F  ++F MY+ Y+  + WK E+L+ +  D GG     A ISG  V+  +K+E 
Sbjct: 197 GGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEG 256

Query: 181 GVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           G+HRVQR+P    S R+   HT   +V VLP+  E+DV +  +D+R+DT RA G+GGQHV
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHV 316

Query: 238 NTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           NTTD  V         +    E+SQ +N+  A++VLRARLY    ++   ++   RKLQ+
Sbjct: 317 NTTDRLV---------VECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNARKLQV 367

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           G+  +SERIRTYNF+Q R+TDHRI   +  ++  L+G   +D +I  LL +   + I  
Sbjct: 368 GTRAQSERIRTYNFTQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLLQSADEEAISE 426


>gi|19113899|ref|NP_592987.1| mitochondrial peptide chain release factor (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|1172908|sp|Q09691|RF1M_SCHPO RecName: Full=Putative peptide chain release factor 1,
           mitochondrial; Short=MRF-1; Short=MtRF-1; Flags:
           Precursor
 gi|1052800|emb|CAA90504.1| mitochondrial peptide chain release factor (predicted)
           [Schizosaccharomyces pombe]
          Length = 396

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 119/334 (35%), Positives = 187/334 (55%), Gaps = 7/334 (2%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84
           +  ++     L +  A +  + +  S +    ++  DL  +     SD+E++ +A  E+ 
Sbjct: 58  DQSAMTNDTDLAKRIARLRRVHNAYSKFKSLSEQISDLKQM-EAQESDAEVKMMAVTEIN 116

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRK 144
            I  +I +   ++   LLP+        ++EIR G GG+EAA+F  +L  MY +YA  + 
Sbjct: 117 EISNKIPKSIEDLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKG 176

Query: 145 WKVEVLSSS-DNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAAT 203
           W  + +S S         E + +I G G +  +  E GVHRVQR PATE  GRVHTS A+
Sbjct: 177 WNCKFISKSAVQGLEAITEAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTAS 236

Query: 204 VAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEK 260
           V VLP+    E        +++I+ MR+ G+GGQHVN T+SAVR+THIPTGI V+    +
Sbjct: 237 VIVLPQVSNDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSR 296

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR 320
           SQHQN+ +A  VL +RL  +   +        RK Q+ S DRSE++RTYNF+Q R+TDHR
Sbjct: 297 SQHQNKEKAFLVLNSRLAALNAAKENEAERLKRKNQVTSSDRSEKLRTYNFNQNRVTDHR 356

Query: 321 INLTLYKLEYVLQGY--IDDIINPLLTAHQAKMI 352
           I L+++ L   +QG    D+ +  +   ++ +++
Sbjct: 357 IGLSMHDLSTFMQGEEKFDEFLEKIRIWNREQLL 390


>gi|94984277|ref|YP_603641.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300]
 gi|94554558|gb|ABF44472.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300]
          Length = 380

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 16/327 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            I     R  E++  +S+    +      ++T+E  ++  I+              ++  
Sbjct: 32  DIPGKTRRLNELDRELSDPELWNNPSRARQVTQEAGSLRRIVDGYRTLQSDANSLNEMLE 91

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +  D        +   I+    E     L               D   I+ ++ G GG+E
Sbjct: 92  MASDEERALLAEEQDTIQARVDELYRETL---------FTMKHADAPAIVRVKGGAGGTE 142

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  + G L RMY R+A  R +KV+VL     +  GY+ I   I G   F  M  E GVHR
Sbjct: 143 AQDWAGMLARMYMRWAERRGYKVDVLDEQPGEQAGYQSIEFIIRGEKAFGMMAPEHGVHR 202

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDS 242
           + RV   +A+ R  TS A+V V+PE  E  +D  IP  D+R+D  R+ G+GGQ VNTTDS
Sbjct: 203 LVRVSPFDANNRRQTSFASVDVVPEVPEEQIDIVIPDSDVRVDVYRSQGAGGQGVNTTDS 262

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+TH+PTGI+V     +SQ +NR  A ++L+ RLYD+E ++   E +  R  Q    +
Sbjct: 263 AVRVTHLPTGIIVAIQVTRSQIKNREMAFQILKQRLYDLEMRKREEEEAKARGEQ-KKIE 321

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKL 328
              +IR+Y   +  + DHR  L  +  
Sbjct: 322 WGSQIRSYVLDKQYVKDHRTGLMKHNP 348


>gi|28950278|emb|CAD71246.1| related to translation releasing factor RF-1, mitochondrial
           [Neurospora crassa]
          Length = 430

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 117/366 (31%), Positives = 189/366 (51%), Gaps = 32/366 (8%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +   L     ++  ++       A  +       IS +++ +   D+ K    +L+ ++
Sbjct: 39  DRARKLAAEHKQLTKQLESEYEPTAAKRAG----EISKVVAALQELDKAKAALDELNGLL 94

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              + D+E+R LA  ++ A +K +  L   ++  L PK    D  C++E+  G GG+E  
Sbjct: 95  --ESDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGR 152

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDND--------DGGYKEIVATISGRGVFSRMKF 178
            F   LFRMY+RY   + +   V+S  + +        +    E +  ++  G F+  + 
Sbjct: 153 HFADTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRG 212

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-------------IPLEDIRID 225
           E+G+HRVQR+PATE  GR HTSA  V VLP   E   D             +   +++ +
Sbjct: 213 EAGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSE 272

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
            MRASG+GGQHVN T+SA+R+THIPTGI V+    +SQ QNR RA ++LR+R+  + R++
Sbjct: 273 KMRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQ 332

Query: 285 MANERSANRKLQIGS--GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
              +    R   +      R ++IRTYN+ Q R TDHR  L ++ L  VLQG   +D +I
Sbjct: 333 REAQAKDLRDSVLSQSQMSRGDKIRTYNYQQDRCTDHRSGLDVHNLPNVLQGGEVLDKVI 392

Query: 341 NPLLTA 346
           N + + 
Sbjct: 393 NSVQSW 398


>gi|255721217|ref|XP_002545543.1| peptide chain release factor 1, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240136032|gb|EER35585.1| peptide chain release factor 1, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 390

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 129/347 (37%), Positives = 196/347 (56%), Gaps = 18/347 (5%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   ++    E+  ++S     D  +K    Y   + I+      +  + E Q+L  + 
Sbjct: 49  ERAESIRKEHKELSEKLSNDYIPDLQVK----YDNYTNILGLYDKLNTYRSEYQELVNI- 103

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D ++R  AQ E+  I  E+ +L ++++  L P     +K C++E+R G GG+EA+
Sbjct: 104 ---TDDPDLRKEAQEELETIAPEVEKLVSQLSVKLRPPVKYAEKGCMIELRPGVGGNEAS 160

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF GDL  MY  +A+   WK +++S   N  G   E +  I   G +  M+ ESGVHRVQ
Sbjct: 161 LFTGDLLNMYMGFASEMNWKSKIISEGRNASGFLNEAILCIDTLGSYDIMRHESGVHRVQ 220

Query: 187 RVPATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           R+P TE  GRVHTS A V VLP+          E +      ++RIDTMRASG GGQHVN
Sbjct: 221 RIPETETKGRVHTSTAAVVVLPKLSEGNESSLKEDERVFAPGEVRIDTMRASGKGGQHVN 280

Query: 239 TTDSAVRITHIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           TTDSAVR+ HIPTG++V   + +SQ  N+ +A  VLR+RL   E++     +   R  Q+
Sbjct: 281 TTDSAVRLVHIPTGMIVYQQDERSQPMNKAKAFAVLRSRLAQKEQEEEMIRQKNLRLDQV 340

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPL 343
            S DRS++I+TYNF + R+TDHR+N +++ L+ VL G  +  +I+  
Sbjct: 341 SSTDRSDKIKTYNFKENRVTDHRVNYSMHDLQGVLSGRKLGQLIDVY 387


>gi|289626068|ref|ZP_06459022.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289646233|ref|ZP_06477576.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. aesculi str. 2250]
          Length = 293

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 103/295 (34%), Positives = 154/295 (52%), Gaps = 12/295 (4%)

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
             + +DL  +  +    + + D+A       E   +     + +  +     D  +  L+
Sbjct: 5   LADAKDLLLMSAEEEDQAAVDDVATEVERLRESLEK-----LEFRRMFSGEMDPNNAYLD 59

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           I+AG+GG+EA  +   L RMY R+A  R +   ++  S  +  G K     I G   F  
Sbjct: 60  IQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGW 119

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGG 234
           ++ E GVHR+ R    ++  R HTS + V V PE  +  ++DI   D+RIDT R+SG+GG
Sbjct: 120 LRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGG 179

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSA 291
           QHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRARLY+ E ++     +   
Sbjct: 180 QHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALE 239

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + K  IG G    +IR+Y     RI D R N+     + VL G ID+ +   L  
Sbjct: 240 DTKSDIGWG---HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291


>gi|19704676|ref|NP_604238.1| peptide chain release factor 2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296328111|ref|ZP_06870644.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|19714986|gb|AAL95537.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296154782|gb|EFG95566.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 308

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 160/306 (52%), Gaps = 11/306 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
            + +S Y++   E  D   +I    S     +    E     K       E    LL   
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFVESGETSFESELSEKHKNLKTD---IEEFEINLLLDG 61

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  + I+ I +G GG+EA  +   L+RMY R+  L+ +KV  L   + D  G K +  
Sbjct: 62  EYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTF 121

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   +  +K E G+HR+ R+   +A+ + HTS A+V V+PE  E  +V+I   DIRI
Sbjct: 122 LVEGINAYGYLKSEKGIHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPVDIRI 181

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN TDSAVRITH P+GI+V    E+SQ  NR  AMK+L+++L ++E K
Sbjct: 182 DTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELK 241

Query: 284 RMANERSAN--RKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDII 340
           +   E       +  IG G+   +IR+Y F     + DHR N  +  ++ V+ G ID  I
Sbjct: 242 KKEEEMKKIQGEQSDIGWGN---QIRSYVFQPYALVKDHRTNTEIGNVKAVMDGDIDGFI 298

Query: 341 NPLLTA 346
           N  L  
Sbjct: 299 NSYLRW 304


>gi|300781808|ref|YP_003778203.1| hypothetical protein PSPTO_1500 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|290758052|gb|ADD53002.1| protein of unknown function [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 293

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 12/293 (4%)

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +DL  +  +    + + D+A           +     + +  +     D  +  L+I+
Sbjct: 7   DAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEK-----LEFRRMFSGEMDPNNAYLDIQ 61

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG+GG+EA  +   L RMY R+A  R +   ++  S  +  G K     I G   F  ++
Sbjct: 62  AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 121

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQH 236
            E GVHR+ R    ++  R HTS + V V PE  +  ++DI   D+RIDT R+SG+GGQH
Sbjct: 122 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQH 181

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANR 293
           VNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRARLY+ E ++     +   + 
Sbjct: 182 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDT 241

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           K  IG G    +IR+Y     RI D R N+     + VL G ID+ +   L  
Sbjct: 242 KSDIGWG---HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291


>gi|164424709|ref|XP_960901.2| hypothetical protein NCU06721 [Neurospora crassa OR74A]
 gi|157070629|gb|EAA31665.2| hypothetical protein NCU06721 [Neurospora crassa OR74A]
          Length = 415

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 117/366 (31%), Positives = 189/366 (51%), Gaps = 32/366 (8%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +   L     ++  ++       A  +       IS +++ +   D+ K    +L+ ++
Sbjct: 24  DRARKLAAEHKQLTKQLESEYEPTAAKRAG----EISKVVAALQELDKAKAALDELNGLL 79

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              + D+E+R LA  ++ A +K +  L   ++  L PK    D  C++E+  G GG+E  
Sbjct: 80  --ESDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGR 137

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDND--------DGGYKEIVATISGRGVFSRMKF 178
            F   LFRMY+RY   + +   V+S  + +        +    E +  ++  G F+  + 
Sbjct: 138 HFADTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRG 197

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-------------IPLEDIRID 225
           E+G+HRVQR+PATE  GR HTSA  V VLP   E   D             +   +++ +
Sbjct: 198 EAGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSE 257

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
            MRASG+GGQHVN T+SA+R+THIPTGI V+    +SQ QNR RA ++LR+R+  + R++
Sbjct: 258 KMRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQ 317

Query: 285 MANERSANRKLQIGS--GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
              +    R   +      R ++IRTYN+ Q R TDHR  L ++ L  VLQG   +D +I
Sbjct: 318 REAQAKDLRDSVLSQSQMSRGDKIRTYNYQQDRCTDHRSGLDVHNLPNVLQGGEVLDKVI 377

Query: 341 NPLLTA 346
           N + + 
Sbjct: 378 NSVQSW 383


>gi|298488301|ref|ZP_07006333.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157123|gb|EFH98211.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 293

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 103/295 (34%), Positives = 154/295 (52%), Gaps = 12/295 (4%)

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
             + +DL  +  +    + + D+A       E   +     + +  +     D  +  L+
Sbjct: 5   LADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEK-----LEFRRMFSGEMDPNNAYLD 59

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           I+AG+GG+EA  +   L RMY R+A  R +   ++  S  +  G K     I G   F  
Sbjct: 60  IQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGW 119

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGG 234
           ++ E GVHR+ R    ++  R HTS + V V PE  +  ++DI   D+RIDT R+SG+GG
Sbjct: 120 LRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGG 179

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSA 291
           QHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRARLY+ E ++     +   
Sbjct: 180 QHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALE 239

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + K  IG G    +IR+Y     RI D R N+     + VL G ID+ +   L  
Sbjct: 240 DTKSDIGWG---HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291


>gi|125984748|ref|XP_001356138.1| GA19071 [Drosophila pseudoobscura pseudoobscura]
 gi|54644457|gb|EAL33198.1| GA19071 [Drosophila pseudoobscura pseudoobscura]
          Length = 392

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 115/324 (35%), Positives = 181/324 (55%), Gaps = 5/324 (1%)

Query: 38  EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEI 97
             + +  +++ +      ++       +  + + D   + + +   +  +   ++ +  +
Sbjct: 58  RLSQLEGVVNALEQRRVLERNITSAKDIEQEKDED-MRKLMEEENEVYADLLSKQEQTML 116

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
             LL   D +   + I  + AG GG EA LF  +LF MY  Y     W+ E  +    D 
Sbjct: 117 QELLALADDEVYPALIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDI 176

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           GG +     ++G   F  ++FE+GVHRVQRVPATE +GR+HTS  ++ V+P  A++ V I
Sbjct: 177 GGLRHANVMVNGADAFHWLRFEAGVHRVQRVPATEKAGRMHTSTVSITVIPRPADVHVHI 236

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +D++I+T RASG+GGQHVNTTDSAVRI H+PTG+ V   SE+SQ +NR  A+K L+AR
Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELALKRLQAR 296

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGY 335
           L   + +     + A +K Q GS +R+E+IRTYNF Q R+TDHRI   TL+ L+  L+G 
Sbjct: 297 LVQQQLESSEASKQATKKAQQGSLNRNEKIRTYNFVQDRVTDHRIQGGTLHNLDGFLKGG 356

Query: 336 --IDDIINPLLTAHQAKMIGSASE 357
             +  ++  L   H+   +    E
Sbjct: 357 ESLSGLVEKLQLEHRRSRLRDLLE 380


>gi|14042548|dbj|BAB55295.1| unnamed protein product [Homo sapiens]
          Length = 238

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 116/232 (50%), Positives = 155/232 (66%), Gaps = 3/232 (1%)

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            LF  ++F MY++YAA ++W  E L    ++ GG +   A+I G   +  MKFE GVHRV
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+RIDT RASG+GGQHVNTTDSAVR
Sbjct: 61  QRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVR 120

Query: 246 ITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTG++     E+SQ +N+  AM  LRA+LY +  +   N+R   RK+QIGS  RSE
Sbjct: 121 IVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEEINKRQNARKIQIGSKGRSE 180

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++  L      + +  
Sbjct: 181 KIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELVQSLKEYADYESLVE 232


>gi|331000229|ref|ZP_08323913.1| peptide chain release factor 2 [Parasutterella excrementihominis
           YIT 11859]
 gi|329572395|gb|EGG54048.1| peptide chain release factor 2 [Parasutterella excrementihominis
           YIT 11859]
          Length = 280

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 98/285 (34%), Positives = 158/285 (55%), Gaps = 11/285 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D    +  + ++  ++KE+  LE +           D+ +C LEI+AG GG+EA
Sbjct: 1   MAKEEDDDASLEAVEADINNLKKEVEHLEFQRM----FNQEHDEANCFLEIQAGAGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY ++A  + +K E++  ++ D  G K     I+G   +  ++ E+G+HR+
Sbjct: 57  QDWASMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETGIHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    +++ R HTS A+V V+PE     ++++   D+RIDT RASG+GGQH+  TDSAV
Sbjct: 117 VRKSPFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAV 176

Query: 245 RITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           RITHIPTGI+ V+ + +SQHQN+  AM +L++RLY+ E ++    +    + K  I  G 
Sbjct: 177 RITHIPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDISWG- 235

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y   Q R+ D R N+       VL G ++  I   L  
Sbjct: 236 --HQIRSYVLDQSRVKDLRTNVETGNTTAVLDGALESFIEASLKQ 278


>gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462]
          Length = 198

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 109/197 (55%), Positives = 147/197 (74%), Gaps = 1/197 (0%)

Query: 161 KEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE 220
           KE+V  I+G  V+S++K+E+G HRVQRVP TE++GRVHTS ATV V+PE  E+D+ I  +
Sbjct: 1   KEVVVMITGDNVYSKLKYENGAHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPK 60

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYD 279
           DIR D  R+SG+GGQHVN T SAVR+THIPTGI+V+   E+SQ +NR RAM++LR+R+YD
Sbjct: 61  DIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYD 120

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
                   +   NRK  IG+GDRSERIRTYN+ Q R+TDHRI LTL KL+ ++ G +D+I
Sbjct: 121 YYETENQEKYDQNRKNAIGTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEI 180

Query: 340 INPLLTAHQAKMIGSAS 356
           I+ L+   QA+ + S +
Sbjct: 181 IDALIVHDQAQKMESLN 197


>gi|114609867|ref|XP_001140527.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|114609869|ref|XP_001140612.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
          Length = 238

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 116/232 (50%), Positives = 155/232 (66%), Gaps = 3/232 (1%)

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            LF  ++F MY++YAA ++W  E L    ++ GG +   A+I G   +  MKFE GVHRV
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+RIDT RASG+GGQHVNTTDSAVR
Sbjct: 61  QRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVR 120

Query: 246 ITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTG++     E+SQ +N+  AM  LRA+LY +  +   N+R   RK+QIGS  RSE
Sbjct: 121 IVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEETNKRQNARKIQIGSKGRSE 180

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++  L      + +  
Sbjct: 181 KIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELVQSLKEYADYESLVE 232


>gi|196013797|ref|XP_002116759.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens]
 gi|190580737|gb|EDV20818.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens]
          Length = 271

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 142/250 (56%), Positives = 189/250 (75%), Gaps = 3/250 (1%)

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           DD + I+EIRA TGG EAALF  DLF+MY+RYA+ R WK E LS  +N+ GG+KE +A+I
Sbjct: 8   DDSNAIIEIRAATGGLEAALFAADLFQMYKRYASHRNWKFEALSFHENEVGGFKEAIASI 67

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            G GVF  MK ESGVHRVQRVP TE+ GRVHTS ATVA+LP+  EID+ I   DI+ DT 
Sbjct: 68  VGAGVFGEMKLESGVHRVQRVPITESDGRVHTSTATVAILPQPEEIDIVINKNDIKFDTF 127

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RA G+GGQHVNTTDSAVR+THIPTG++V    EKSQH+N+ +A+++L+A+L+D +R++  
Sbjct: 128 RAQGAGGQHVNTTDSAVRLTHIPTGMIVAVQEEKSQHRNKAKAIQILQAKLFDEQRQQNQ 187

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLL 344
            +R   R+ QIG+G RSERIRTYN+ Q RITDHRIN++LY ++  L G   ++ +++ LL
Sbjct: 188 TDRVHARRQQIGTGARSERIRTYNYQQDRITDHRINMSLYGIDDFLSGNESLNHLMSSLL 247

Query: 345 TAHQAKMIGS 354
             ++ K I +
Sbjct: 248 EENRMKAIRN 257


>gi|19921226|ref|NP_609617.1| CG5705 [Drosophila melanogaster]
 gi|7298021|gb|AAF53262.1| CG5705 [Drosophila melanogaster]
 gi|16769148|gb|AAL28793.1| LD18447p [Drosophila melanogaster]
 gi|220943136|gb|ACL84111.1| CG5705-PA [synthetic construct]
 gi|220953196|gb|ACL89141.1| CG5705-PA [synthetic construct]
          Length = 392

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 122/324 (37%), Positives = 185/324 (57%), Gaps = 5/324 (1%)

Query: 38  EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEI 97
             A +  ++S +      ++       +  + + D     + +   + ++   ++ +  +
Sbjct: 58  RLAQLEGVVSALEQRRVLERHITSAKDMEAEKDED-MRELMREENEVYVDLLGKQDQALL 116

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
             LL   D ++  + I  + AG GG EA LF  +L+ MY  Y     W+ E  +S   D 
Sbjct: 117 QELLTLSDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDI 176

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           GG +     +SG   F  +++E+GVHRVQRVPATE SGR+HTS A++ V+P  A+I V I
Sbjct: 177 GGLRHASLMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADIQVHI 236

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +D++I+T RASG+GGQHVNTTDSAVRI H+PTG+ V   SE+SQ +NR  AMK LR+R
Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQG- 334
           L   + + +   + A +K Q GS +R+E+IRTYNF Q RITDHRI   TL+ L   L+G 
Sbjct: 297 LVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTLHNLNGFLKGG 356

Query: 335 -YIDDIINPLLTAHQAKMIGSASE 357
             +  +I  L   H+ + +    +
Sbjct: 357 DQLSGLIEKLQLEHRRERLKELLD 380


>gi|255945217|ref|XP_002563376.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588111|emb|CAP86182.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 423

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 116/360 (32%), Positives = 192/360 (53%), Gaps = 30/360 (8%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           L     ++  R+ ES       K  +    ++P+ + +  +        +L++++ D N+
Sbjct: 49  LAAEHTKLAERLGESFD----AKTAKRAGELAPVANILKEWVNANDSIVELNSLLTDPNT 104

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D+E+R LA  ++ +    +  + + +   L+P+    D  C+LEIR G GG EA LF  +
Sbjct: 105 DAELRSLATEDLESSRDALPSISDRLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFE 164

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEI----VATISGRGVFSRMKFESGVHRVQR 187
           + RMY  + + R  +  +L   D + G  ++     V  I   G +  ++ ESGVHRVQR
Sbjct: 165 MLRMYVAFCSRRGLRPTIL-KQDTEVGPSEDRLSEAVIEIQANGAYDILRTESGVHRVQR 223

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIP---------------LEDIRIDTMRASGS 232
           VPATE  GR HTSA +V VLP   E   ++                 +++R++ MRA G+
Sbjct: 224 VPATETKGRTHTSAVSVMVLPSFPEDTSEMDNALNFEDPSSDYYIDPQEVRVEKMRAGGA 283

Query: 233 GGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T+SA+R+THIPT  +V+   E+SQ  NR +A +VLRA+L +  ++    E   
Sbjct: 284 GGQHVNKTESAIRLTHIPTNTVVSMQDERSQQANRRKAWQVLRAKLAEARQEAREQELMQ 343

Query: 292 NRKL---QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTA 346
            R+     +    R ++IRTYNF Q R TDHR  +T++ L+ +L G   ++ +++ + T 
Sbjct: 344 LRRGILGGVAKMGRGDKIRTYNFGQSRCTDHRTGITIHNLDGILDGGDGLETVMDSVRTW 403


>gi|116748170|ref|YP_844857.1| peptide chain release factor 2 [Syntrophobacter fumaroxidans MPOB]
 gi|116697234|gb|ABK16422.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 312

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 13/306 (4%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           I+       ++ ++ + +  +  +      ++D+ +  +   ++        +    L  
Sbjct: 2   IVENWQRLSEELRDNELMLEMALEEEDREVLKDVHRKALSLQKEL-----RTVELQQLLG 56

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
           + +DDK+ I+ I AG GG+EA  +   L RMY R+   + + V+++   + ++ G K   
Sbjct: 57  EENDDKNAIVSINAGAGGTEAQDWAEMLLRMYLRWCEKKSFTVQMVDMLEGEEAGIKSGT 116

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIR 223
            T+SG   +  +K ESG+HR+ R+   +ASGR HTS A V V+PE   +I+V+I   D+R
Sbjct: 117 FTVSGSHAYGLLKGESGIHRLVRISPFDASGRRHTSFAAVLVIPEVDEKIEVEIKQADLR 176

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVN T SAVRITH+PTGI+V   +EKSQH+NR  A+K+LRARLY+ E+
Sbjct: 177 IDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQCQNEKSQHRNRDIALKILRARLYEREK 236

Query: 283 KRMANERSANRKL--QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDI 339
           +    +          I  G+   +IR+Y     R I DHR ++    +E VL G IDD 
Sbjct: 237 RAQQEKLQEAHDSLDDIAWGN---QIRSYVLQPYRLIKDHRTSIEKGNVEGVLDGEIDDF 293

Query: 340 INPLLT 345
           I   L 
Sbjct: 294 IEGYLM 299


>gi|121727222|ref|ZP_01680389.1| peptide chain release factor 1 [Vibrio cholerae V52]
 gi|121630467|gb|EAX62860.1| peptide chain release factor 1 [Vibrio cholerae V52]
          Length = 193

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 104/188 (55%), Positives = 142/188 (75%), Gaps = 2/188 (1%)

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRAS 230
            +  +KFESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+S
Sbjct: 4   AYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSS 63

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQHVNTTDSA+RITH+PTGI+V    E+SQH+N+ +AM VL AR+   E  + A E 
Sbjct: 64  GAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEI 123

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           S  R+  +GSGDRS+RIRTYN+ QGR++DHRINLT+Y+L  V++G +  +I+P++  HQA
Sbjct: 124 SDTRRNLLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQA 183

Query: 350 KMIGSASE 357
             + + ++
Sbjct: 184 DQLAALAD 191


>gi|146161938|ref|XP_001008252.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila]
 gi|146146594|gb|EAR88007.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 452

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 205/354 (57%), Gaps = 8/354 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAY--IKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           ++    N + +I+  +S+          +L ++   + P+       +Q  +  Q+L   
Sbjct: 84  RMKQFHNEYTDIQKILSQEQQQADINLEQLRKKINVLQPLNDVFEKLEQNIKTLQELQKQ 143

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK-DTDDDKSCILEIRAGTGGSE 124
             +  SD E+  L + E+   ++ I EL++E    LLPK   DD     LE+R G GGSE
Sbjct: 144 KEESASDPEMLALIEEEMENSKQLIDELQDECLEQLLPKGKHDDCSEITLEVRGGAGGSE 203

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDD--GGYKEIVATISGRGVFSRMKFESGV 182
           ++LF  ++F+MY+ + A + ++  + S   +     G K  V  +SG  ++ +M  ESGV
Sbjct: 204 SSLFAEEVFKMYQAFFAQQGYQFSIDSFQVDMAINKGCKLGVLKVSGTNIYKKMMNESGV 263

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           H+V RVP TE+ GR+H+S  +V  +     +D  +  +D++ + MR+ G+GGQHVN  +S
Sbjct: 264 HKVIRVPETESKGRLHSSTISVV-VMPVVPMDFKVDEKDLKFEFMRSQGAGGQHVNKVES 322

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           A R+TH+PTGI V    ++ Q +N+ RA+K+L  +L+ VE ++   ++S  RK QIG GD
Sbjct: 323 ACRVTHLPTGISVLCQDDRQQERNKQRALKLLTEKLFQVEVEKSNQQQSDQRKSQIGGGD 382

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGS 354
           RS++IRTYNF QGRITDHR NLTL+ +E +++G  +++ I+        ++I S
Sbjct: 383 RSDKIRTYNFPQGRITDHRTNLTLFGIEKMMKGEFLEEFIDEYEEKVNNELIES 436


>gi|330807738|ref|YP_004352200.1| peptide chain release factor 2 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375846|gb|AEA67196.1| Putative Peptide chain release factor 2 [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 293

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 101/295 (34%), Positives = 154/295 (52%), Gaps = 12/295 (4%)

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
             + +DL  +  + N +  + D+        E   +     + +  +     D  +  L+
Sbjct: 5   LADCRDLLDMAVEENDEGAVGDVVAELTRLDENLAK-----LEFRRMFSGEMDMNNAYLD 59

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           I+AG+GG+EA  +   L RMY R+A  R +   ++  S  +  G K     I G   F  
Sbjct: 60  IQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGW 119

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGG 234
           ++ E GVHR+ R    ++  R HTS + V V PE  +  +++I   D+RIDT R+SG+GG
Sbjct: 120 LRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGG 179

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSA 291
           QHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRARLY+ E ++     +   
Sbjct: 180 QHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALE 239

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           + K  IG G    +IR+Y     RI D R ++     + VL G ID+ +   L  
Sbjct: 240 DTKSDIGWG---HQIRSYVLDASRIKDLRTSIERSDCDKVLDGDIDEYLIASLKQ 291


>gi|294785988|ref|ZP_06751275.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27]
 gi|294486325|gb|EFG33688.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27]
          Length = 308

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 112/306 (36%), Positives = 161/306 (52%), Gaps = 11/306 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
            + +S Y++   E  D   +I    S     +        I K       E    LL   
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFVESGEASFENELQTKHKILKSD---IEEFEINLLLDG 61

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  + I+ I +G GG+EA  +   L+RMY R+  L+ +KV  L   + D  G K +  
Sbjct: 62  EYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTF 121

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   +  +K E GVHR+ R+   +A+ + HTS A+V V+PE  E  +V+I   DIRI
Sbjct: 122 LVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPTDIRI 181

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN TDSAVRITH P+GI+V    E+SQ  NR  AMK+L+++L ++E K
Sbjct: 182 DTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIK 241

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDII 340
           +   E       +  IG G+   +IR+Y F     + DHR N  +  ++ V+ G IDD I
Sbjct: 242 KKEEEMKKIQGEQSDIGWGN---QIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFI 298

Query: 341 NPLLTA 346
           N  L  
Sbjct: 299 NSYLRW 304


>gi|296203802|ref|XP_002749048.1| PREDICTED: peptide chain release factor 1, mitochondrial
           [Callithrix jacchus]
          Length = 488

 Score =  185 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 127/405 (31%), Positives = 207/405 (51%), Gaps = 53/405 (13%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L      +E  +      +   + L    A ++P+ +      + +Q  ++L +
Sbjct: 77  QKYMENLHKESQTLEQCLQHFSVNEEKRRSLNRRQAELAPLAAVYQEIQEAEQAIEELES 136

Query: 65  VIG--------------------------------------------DHNSDSEIRDLAQ 80
           +                                              +   + ++++LA 
Sbjct: 137 MCKSRQGSALWPRLECSGAVITDCSLNLPGSSDPPASASQVAGTTGLNKQDEKQLQELAL 196

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--TGGSEAALFVGDLFRMYER 138
            E   + ++I  L +E+   L+PK+  D    ILE+ +G  TGG     F  ++F MY+ 
Sbjct: 197 EERQTLVQKINMLYSELFQSLVPKEKYDKNDVILEVTSGKTTGGDICQQFTREIFDMYQN 256

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV- 197
           Y+  + W+ E+L+ +  D GG     A ISG  V+  +K+E G+HRVQR+P    S R+ 
Sbjct: 257 YSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQ 316

Query: 198 --HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
             HT   +V +LP+  E+DV +  +D+RIDT RA G+GGQHVNTTDSAVR+ HIPTG++V
Sbjct: 317 RIHTGTMSVIILPQPDEVDVKLDPKDLRIDTFRARGAGGQHVNTTDSAVRLVHIPTGLVV 376

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
               E+SQ +N+  A+ VLRARLY    ++   ++ + RKLQ+G+G +SERIRTYNF+Q 
Sbjct: 377 ECQQERSQIRNKEIALSVLRARLYQQIIEKNKCQQHSTRKLQVGTGAQSERIRTYNFTQD 436

Query: 315 RITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSASE 357
           R+TDHRI   +  ++  + G   +D +I  LL +   + I    +
Sbjct: 437 RVTDHRIAYEVRDIKEFVCGGKALDQLIQRLLQSADEEAIVELLD 481


>gi|315047700|ref|XP_003173225.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893]
 gi|311343611|gb|EFR02814.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893]
          Length = 438

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 195/381 (51%), Gaps = 38/381 (9%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L    A +  + +ES          +    ++P+ + +  +D   +   +L  ++ + +
Sbjct: 53  ALAAEHATLSAKQTESFE----RAAAKRIGELAPVANALRDWDTAHESITELQGLVNEPS 108

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D+E++ LA+ ++      +  L   +   L+P+    D  C++EIR G GG EA LF  
Sbjct: 109 TDAELKSLAEDDITTTIGTLSSLSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAA 168

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHR 184
           ++ RMY  + + R  +  ++     D  G        E+V  +   G ++ ++ E+GVHR
Sbjct: 169 EMLRMYTSFCSSRGLRTTIIKMEAEDGAGAGAEDRLSEVVMEVETPGSYNILRTEAGVHR 228

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDI--------------PLEDIRIDTMRAS 230
           VQRVPATEA GR HTSA +V +LP   E + +                 +D++ +  RAS
Sbjct: 229 VQRVPATEAKGRTHTSAVSVMILPSFPESNQEDSPLNFDDPNSDYYVNPQDVQSEKFRAS 288

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQHVN T+SAVR+TH+PTG +++    +SQH+NR +A  +LRA+L    R+    E 
Sbjct: 289 GAGGQHVNKTESAVRLTHVPTGTVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEM 348

Query: 290 SANRKLQIGSGD---RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLL 344
              R+  +G  +   R ++IRTYNF+Q R TDHR  +T++ +  V+ G   ++ II  + 
Sbjct: 349 MELRRGAMGGVNKTGRGDKIRTYNFTQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQ 408

Query: 345 TA--HQA------KMIGSASE 357
                Q       +   + +E
Sbjct: 409 NWLVDQEVEALCLEQQAAIAE 429


>gi|149237364|ref|XP_001524559.1| peptide chain release factor 1, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452094|gb|EDK46350.1| peptide chain release factor 1, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 392

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 127/352 (36%), Positives = 197/352 (55%), Gaps = 16/352 (4%)

Query: 16  FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
             E + ++S         +L   Y   S ++     + +   E ++L T+      D ++
Sbjct: 42  LQEEQAQLSSKLDTYDP-ELQITYDRNSHVLKTYDEFSRILLEIRELSTI-----RDPDL 95

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
              AQ E+  +  +   +  E+N  LLP     +  C++E+R G GG+EA+LF  DL +M
Sbjct: 96  ISEAQEELQELVPKYTSIIEELNNKLLPPVKYAECGCMIELRPGVGGNEASLFTDDLMQM 155

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y  +A+++ W   V+S S N  G   EI+ +I+  G +  ++ ESGVHRVQR+P TE  G
Sbjct: 156 YLNFASIQSWPALVISRSTNSSGFVNEIILSINQPGAYDVLRHESGVHRVQRIPETENKG 215

Query: 196 RVHTSAATVAVLPEAAE--------IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
           RVHTS + V +LP+ ++         ++     ++RIDTMRA G GGQHVNTTDSAVR+ 
Sbjct: 216 RVHTSTSAVIILPKMSDGNENSLRADEMQFKPGEVRIDTMRAGGKGGQHVNTTDSAVRLV 275

Query: 248 HIPTGIMVTSSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           HIPTGIMV   + +SQ QN+ +A  +LRARL + ER    N +   R  Q+ S DRS++I
Sbjct: 276 HIPTGIMVMQQDERSQPQNKAKAFAILRARLAEKERVEELNRQRQMRTSQVSSTDRSDKI 335

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           RTYN+ Q R+TDHR   +L+ +   + G  +++II+ +      + +    E
Sbjct: 336 RTYNYPQNRVTDHRCGFSLHDIAGCMGGNKLNEIIDKVREVEYKERLQEMLE 387


>gi|110639213|ref|YP_679422.1| peptide chain release factor 2 [Cytophaga hutchinsonii ATCC 33406]
 gi|110281894|gb|ABG60080.1| bacterial peptide chain release factor 2 (bRF-2) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 358

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 14/343 (4%)

Query: 8   QICDLKNRFAEIELRMS-ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++ ++K      E  +S      D   +  +   +I         YD    +  DL  + 
Sbjct: 25  KMDEIKA-----EQELSLAPTFWDDSKEAEKILRSIKNKKVWTDPYDALLTKLGDLEALN 79

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
             + +          E  A+ K + ELE    +  +    +D  S +LEI  G GG+E+ 
Sbjct: 80  EFYQAGDIDDKEMDAEFAAVAKVLEELE----FKKMLSAEEDQLSAVLEINPGAGGTESN 135

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY  +     + V  + +   +  G K     I G+  +  +K E GVHR+ 
Sbjct: 136 DWADMLMRMYIMWGEKNGYTVREIVNQPGEVAGIKFASLGIEGQFAYGNLKSEIGVHRLV 195

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R     A G+  TS A+V V PE  E  +++I + D+  DT RA G+GGQ+VN  ++AVR
Sbjct: 196 RDSPFNADGKRQTSFASVYVYPEVDETINIEINMGDVEWDTFRAGGAGGQNVNKVETAVR 255

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           + H P+G+++    E+SQ QN+ +A+K+L++RLY +E  +    ++A    +    D   
Sbjct: 256 LKHKPSGLIIECQQERSQIQNKDKALKLLKSRLYQIEIDKRNEAKAAVEGTK-KKIDFGS 314

Query: 305 RIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +IR Y     + I D R  +    ++ VL G +++ I   L  
Sbjct: 315 QIRNYVLFPYKLIKDVRTGVERTDVDNVLAGDLNEYIKAYLLM 357


>gi|254411738|ref|ZP_05025514.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181460|gb|EDX76448.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC
           7420]
          Length = 305

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 91/304 (29%), Positives = 150/304 (49%), Gaps = 6/304 (1%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           +  Y Q K   +D   V+     +++   L + +   ++       +      L     D
Sbjct: 3   LQQYQQWKSNLEDAKAVLELLELETDEGLLQEAQTNVVKLNREL--DRWELEQLLSGPYD 60

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
               +L I AG GG++A  +   L RMY R+A  + +KV++   S+ D+ G K     I 
Sbjct: 61  ANGAVLAINAGAGGTDAQDWAEMLLRMYTRWAENQGYKVQLAEFSEGDEAGIKSATLEIQ 120

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTM 227
           G   +  +K E G HR+ R+    A+G+  TS A V V+P    ++D+DIP  D+ I T 
Sbjct: 121 GLRAYGYLKAEKGTHRLVRISPYNANGKRQTSFAGVEVMPILNEDVDLDIPETDLEITTS 180

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+ G GGQ+VN  ++AVR+ HIPT I V  + E+SQ QN+ +A+ +L+A+L  + +++ A
Sbjct: 181 RSGGKGGQNVNKVETAVRVKHIPTDIAVRCTQERSQLQNKEKALALLKAKLLVIAQEQRA 240

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            E +  R   +       +IR Y F   + + D R N+    ++ VL G +D  I   L 
Sbjct: 241 QEIAEIRGDMVE-AAWGNQIRNYVFHPYQLVKDLRTNVETTGVDDVLNGTLDPFIEAYLR 299

Query: 346 AHQA 349
               
Sbjct: 300 QENQ 303


>gi|87309088|ref|ZP_01091225.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM
           3645]
 gi|87288079|gb|EAQ79976.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM
           3645]
          Length = 332

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 104/328 (31%), Positives = 159/328 (48%), Gaps = 8/328 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M      D           +  + S +   +       DL  ++     D      A+ E
Sbjct: 1   MVAPDFWDNQEIAQTVVGQLKSLKSILEPLEACAAAVGDLDAMLEMAEEDDSFDAEAKAE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           V  +E E+ +LE       L     D    ++ I A  GG++A  +   L RMY  +AA 
Sbjct: 61  VARLEAELDQLEL----KALLNGQHDACGALVSIHARDGGTDANDWAEMLLRMYSHWAAE 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
             + VE++  +DN++ G       + G   +  +K ESG+HR+ R+    + G+  TS A
Sbjct: 117 HDYTVELIDRADNEEAGINSATFAVRGVMAYGYLKGESGMHRLVRISPFNSEGKRQTSFA 176

Query: 203 TVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
            V V PE     +V+I  ED+RIDT RASG+GGQHVN TDSA+R+TH+PTG++V   +E+
Sbjct: 177 AVDVSPEIPDSEEVEIDEEDVRIDTYRASGAGGQHVNKTDSAIRLTHLPTGVVVQCQNER 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQH+NR +A K+LR+R+  +E +R   E +A  K Q   G    +IR Y      R+ D 
Sbjct: 237 SQHKNRAQAWKMLRSRIARIEEERREAEEAARYKTQAKVG-FGSQIRNYFLHPDQRVKDA 295

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R    +     V+ G I   ++  L   
Sbjct: 296 RTGHYVGSFHAVMDGDIQGFLDAYLRWR 323


>gi|34762942|ref|ZP_00143922.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27887403|gb|EAA24493.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 308

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 112/306 (36%), Positives = 161/306 (52%), Gaps = 11/306 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
            + +S Y++   E  D   +I    S     +        I K       E    LL   
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFVESGEASFENELQTKHKILKSD---IEEFEINLLLDG 61

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  + I+ I +G GG+EA  +   L+RMY R+  L+ +KV  L   + D  G K +  
Sbjct: 62  EYDINNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGIKSVTF 121

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   +  +K E GVHR+ R+   +A+ + HTS A+V V+PE  E  +V+I   DIRI
Sbjct: 122 LVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRI 181

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN TDSAVRITH P+GI+V    E+SQ  NR  AMK+L+++L ++E K
Sbjct: 182 DTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIK 241

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDII 340
           +   E       +  IG G+   +IR+Y F     + DHR N  +  ++ V+ G IDD I
Sbjct: 242 KKEEEMKKIQGEQSDIGWGN---QIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFI 298

Query: 341 NPLLTA 346
           N  L  
Sbjct: 299 NSYLRW 304


>gi|237738152|ref|ZP_04568633.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
 gi|229420032|gb|EEO35079.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
          Length = 308

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 106/311 (34%), Positives = 164/311 (52%), Gaps = 14/311 (4%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
             ++++      + + E+ L   +    +D +     +  +L  +          +  LL
Sbjct: 5   KELVAEFKNLVAELENEEVLIEFVEQGETDFQEELEEKHIILGKDV------EHFDTRLL 58

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D  + I+ I +G GG+EA  +   L+RMY R+ + +K+K+  +     D  G K 
Sbjct: 59  LDGEYDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCSDKKYKISEMDFMPGDSVGIKS 118

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLED 221
           I   + G   F  +K E GVHR+ R+   +A+ + HTS A+V V+PE  +  +V+I   D
Sbjct: 119 ITFMVEGMNAFGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDSIEVNIDPSD 178

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           IRIDT RASG+GGQHVN TDSAVRITH PTGI+V    E+SQ  NR  AMK+L+++L ++
Sbjct: 179 IRIDTYRASGAGGQHVNMTDSAVRITHFPTGIVVTCQRERSQLSNRETAMKLLKSKLIEL 238

Query: 281 ERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYID 337
           E K+   E       +  IG G+   +IR+Y F     + DHR N     ++ V+ G ID
Sbjct: 239 EMKKKEEELKKLQGEQSDIGWGN---QIRSYVFQPYTLVKDHRTNCESGNIKAVMDGDID 295

Query: 338 DIINPLLTAHQ 348
             IN  L  ++
Sbjct: 296 IFINGYLRWNK 306


>gi|146283094|ref|YP_001173247.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
 gi|145571299|gb|ABP80405.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
          Length = 270

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 96/253 (37%), Positives = 142/253 (56%), Gaps = 7/253 (2%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
            +  +     D  +C L+I+AG+GG+EA  +   L RMY R+A  R +  E++  S+ + 
Sbjct: 19  EFRRMFSHEMDPNNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFSAEIVELSEGEV 78

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVD 216
            G K     I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  +++
Sbjct: 79  AGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIE 138

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           I   D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRA
Sbjct: 139 INPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRA 198

Query: 276 RLYDVERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LY++E ++     +   + K  IG G    +IR+Y     RI D R  +     + VL 
Sbjct: 199 KLYELEMQKRNAASQALEDSKSDIGWG---HQIRSYVLDDSRIKDLRTGVERSDCQKVLD 255

Query: 334 GYIDDIINPLLTA 346
           G +D  +   L  
Sbjct: 256 GDLDGYLEASLKQ 268


>gi|284053267|ref|ZP_06383477.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca]
          Length = 309

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 10/304 (3%)

Query: 50  SIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
             + +  ++   +  ++   + +S  ++     V           +      L     D 
Sbjct: 5   QDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDI-----DRWELQQLLSGPYDR 59

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
              +L I AG GG++A  +   L RMY R+   + +KV +   S+ D+ G K     + G
Sbjct: 60  SGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEMEG 119

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE--IDVDIPLEDIRIDTM 227
              +  +K E G HR+ R+    A+G+  TS A V ++P   E  I++DIP +D+ I T 
Sbjct: 120 PYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITTS 179

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RA G GGQ+VN  ++AVRI HIPTGI V  + E+SQ QNR +AM +L+A+L  V +++ A
Sbjct: 180 RAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQRA 239

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +  R   +       +IR Y F   + + D R       +  V+ G +D  I   L 
Sbjct: 240 QAIAEIRGDLVE-AAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYLR 298

Query: 346 AHQA 349
               
Sbjct: 299 QENQ 302


>gi|261188569|ref|XP_002620699.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
 gi|239593183|gb|EEQ75764.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
 gi|239613247|gb|EEQ90234.1| peptide chain release factor 1 [Ajellomyces dermatitidis ER-3]
          Length = 438

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 115/385 (29%), Positives = 192/385 (49%), Gaps = 43/385 (11%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            + N  A +  +++E+       +       ++     +  ++   +   +L+ ++ D +
Sbjct: 51  SIANEHATLTSKLAETFDPKTAKRAG----ELATTARALKKWEDANETIAELNNLLKDPS 106

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DSE+  LA  ++ +    +  L   +   L+P+    D  C+LE+R G GG EA +F  
Sbjct: 107 TDSELHSLALEDLQSTTTSLAILSTNLKQALIPRHPFADLPCLLELRPGAGGEEAGIFAN 166

Query: 131 DLFRMYERYAALRKWKVEVL---SSSDNDDGGYKEI----VATISGRGVFSRMKFESGVH 183
           +L RMY  + + R   V +L   S +    GG ++     V  I   G +  ++ E+GVH
Sbjct: 167 ELLRMYTMFCSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVH 226

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEI---------------DVDIPLEDIRIDTMR 228
           RVQRVPATE+ GR HTSA +V +LP                    D  I  +++ ++ MR
Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMR 286

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           A G+GGQHVN T+SA+R+THIPTGI+V     +SQH+NR +A  +LRAR+    R+    
Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346

Query: 288 ERSANRKLQ---IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINP 342
           E    R+     +G   R ++IRTYNF Q R TDHR   T++ L  +++G   ++ I++ 
Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFGQNRCTDHRSGFTVHNLGSIMEGGDGLEKIMDS 406

Query: 343 LLTA-----------HQAKMIGSAS 356
           +               +   +  A+
Sbjct: 407 VRGWLVDQEVDNVFAEEQMKLAQAA 431


>gi|33241929|ref|NP_876870.1| peptide chain release factor 2 [Chlamydophila pneumoniae TW-183]
 gi|33236439|gb|AAP98527.1| translation releasing factor RF-2 [Chlamydophila pneumoniae TW-183]
          Length = 253

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 96/245 (39%), Positives = 141/245 (57%), Gaps = 9/245 (3%)

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D  SC L I AG GG+E+  +V  LFRMY R+A   +W +EV+   D +  G K +    
Sbjct: 7   DKNSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKF 66

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDT 226
           SG   +   K E GVHR+ R+   +++G+ HTS A+V V PE  +   ++I   D+RIDT
Sbjct: 67  SGMYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDT 126

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            R+SG+GGQHVN T+SAVRITH+P+G++V   +E+SQ QNR   MK+L+A+LY    +  
Sbjct: 127 FRSSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQER 186

Query: 286 ANERSANRKL--QIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIIN 341
             ++S +RK   +I  G    +IR Y F     + D R       ++ +L G  +D+ I 
Sbjct: 187 LEKQSLDRKDKKEIAWG---SQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIK 243

Query: 342 PLLTA 346
             L  
Sbjct: 244 AYLAE 248


>gi|302830560|ref|XP_002946846.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f.
           nagariensis]
 gi|300267890|gb|EFJ52072.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f.
           nagariensis]
          Length = 361

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 145/342 (42%), Positives = 203/342 (59%), Gaps = 37/342 (10%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           I        + +DL  ++ D   DS +R +A+ E   ++++   L   +   L+P+D  D
Sbjct: 2   IRGMASSLLQLEDLAALLKDP--DSRVRAMAEEEGRELQQQAAGLTRRLLLALVPRDPRD 59

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATI 167
            ++ +LE+RAG GG EAALF G+L  MY ++A  R W  +V+  + ++  GG K +VA +
Sbjct: 60  GRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTASEVPGGVKHVVAAV 119

Query: 168 SGRG-------------------------------VFSRMKFESGVHRVQRVPATEASGR 196
           +                                  V+  +  ESGVHRVQRVP TEA GR
Sbjct: 120 AAGRGAGRRAGGIGDGGEGYDGGEGNSDQDGDAIGVYGTLLPESGVHRVQRVPVTEAQGR 179

Query: 197 VHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           VHTS   V VLP+A E+DV +  ED+RI+TMRASG+GGQHVN TDSAVRITH+PTG++V 
Sbjct: 180 VHTSTVAVVVLPQADEVDVKLRDEDLRIETMRASGAGGQHVNVTDSAVRITHVPTGLVVS 239

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR 315
             +E+SQH NR  A+K+LRARLYD+E ++ A E    R   + S DRSERIRTYNF QGR
Sbjct: 240 CQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASADRSERIRTYNFPQGR 299

Query: 316 ITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSA 355
           +TDHRI+LTL+ L+ VL G   +  ++  L  A + + +   
Sbjct: 300 VTDHRIHLTLHDLDSVLVGGEGLQRLMGVLRAAREEEALRRL 341


>gi|307069624|ref|YP_003878101.1| putative peptide chain release factor RF-1 [Candidatus Zinderia
           insecticola CARI]
 gi|306482884|gb|ADM89755.1| putative peptide chain release factor RF-1 [Candidatus Zinderia
           insecticola CARI]
          Length = 345

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 119/324 (36%), Positives = 184/324 (56%), Gaps = 10/324 (3%)

Query: 21  LRMSESPSVDAYIKLTEEYA---AISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRD 77
            ++ +    +   K  +       I PII   ++Y ++  + ++    I D    +   D
Sbjct: 25  KKIQDKNIFNNLKKYKKICKNIFKIRPIIKYYNLYKKEINKIKENKKFINDKEFKNIALD 84

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
             +     I         +     +  + + +   +LEIRA +GG EAALFV DL++MY 
Sbjct: 85  EIKKCKDKIFFLN-----KKIEKNIIINKNINNKILLEIRAASGGEEAALFVKDLYKMYF 139

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
            ++    WK+++LS   +++ GYKEI+  I G   +S +K ESG HRVQR+P TE+  +V
Sbjct: 140 NFSQKNNWKIKILSFIKSNNNGYKEIIIQIYGLNSYSLLKNESGNHRVQRIPITESHDKV 199

Query: 198 HTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
           HTS  T+AV+ +       +    D++I T +ASG+GGQHVN TDSAVRI HIPT I V 
Sbjct: 200 HTSTCTIAVINKIKNNKKILINNKDLKIHTFKASGAGGQHVNKTDSAVRIFHIPTKITVE 259

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR 315
             S +SQH N+  A+K+L+ ++  + +  + N+    RK  IG+G RSE+IRTYNF Q R
Sbjct: 260 CQSNRSQHINKKNALKILKYKILKINKNSIKNKEDKFRKSLIGTGKRSEKIRTYNFPQNR 319

Query: 316 ITDHRINLTLYKLEYVLQGYIDDI 339
           +T+H+INLT+Y L  +L G ++ I
Sbjct: 320 VTNHKINLTVYNLNSILNGNLEKI 343


>gi|332287121|ref|YP_004422022.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
 gi|325506910|gb|ADZ18548.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
 gi|328914361|gb|AEB55194.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
          Length = 294

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 106/285 (37%), Positives = 151/285 (52%), Gaps = 9/285 (3%)

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           ++ D       + ++         + +E     L     D   C L I AG GG+E+  +
Sbjct: 9   NDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGAGGTESCDW 68

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           V  LFRMY R+AA  +WKVEV+   + D  G K +    SG   +   K E GVHR+ R+
Sbjct: 69  VEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAERGVHRLVRI 128

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V P    EI++DI   D+RIDT R+SG+GGQHVN TDSAVRIT
Sbjct: 129 SPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNVTDSAVRIT 188

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRSE 304
           HIPTGIMV    E+SQ QNR   MK+LRAR+Y    +    ++  +RK   +I  G    
Sbjct: 189 HIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKNKKEIAWG---S 245

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           +IR Y F     + D R       ++ ++ G  +DD +   L  +
Sbjct: 246 QIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLAEY 290


>gi|119625009|gb|EAX04604.1| hCG2025689 [Homo sapiens]
          Length = 238

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 114/232 (49%), Positives = 153/232 (65%), Gaps = 3/232 (1%)

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
            LF  ++F MY++YAA ++W  E L    ++ GG +   A+I G   +  MKFE GVHRV
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSEVGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP TE  G VHTS  TVA+LP+  EI++ I  +D+RIDT RASG+G QHVNTTDSAVR
Sbjct: 61  QRVPKTEKQGCVHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGEQHVNTTDSAVR 120

Query: 246 ITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTG++     E+SQ +N+  AM  LRA+LY +  +   N+R   RK+QIGS  RSE
Sbjct: 121 IVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHVEEEINKRQNARKIQIGSKGRSE 180

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           +IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++  L      + +  
Sbjct: 181 KIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELVQSLKEYANYESLVE 232


>gi|327357433|gb|EGE86290.1| peptide chain release factor 1 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 438

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 188/364 (51%), Gaps = 32/364 (8%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            + N  A +  +++E+       +       ++     +  ++   +   +L+ ++ D +
Sbjct: 51  SIANEHATLTSKLAETFDPKTAKRAG----ELATTARALKKWEDANETIAELNNLLKDPS 106

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DSE+  LA  ++ +    +  L   +   L+P+    D  C+LE+R G GG EA +F  
Sbjct: 107 TDSELHSLALEDLQSTTTSLAILSTNLKQALIPRHPFADLPCLLELRPGAGGEEAGIFAN 166

Query: 131 DLFRMYERYAALRKWKVEVL---SSSDNDDGGYKEI----VATISGRGVFSRMKFESGVH 183
           +L RMY  + + R   V +L   S +    GG ++     V  I   G +  ++ E+GVH
Sbjct: 167 ELLRMYTMFCSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVH 226

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEI---------------DVDIPLEDIRIDTMR 228
           RVQRVPATE+ GR HTSA +V +LP                    D  I  +++ ++ MR
Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMR 286

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           A G+GGQHVN T+SA+R+THIPTGI+V     +SQH+NR +A  +LRAR+    R+    
Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346

Query: 288 ERSANRKLQ---IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINP 342
           E    R+     +G   R ++IRTYNF Q R TDHR   T++ L  +++G   ++ I++ 
Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFGQNRCTDHRSGFTVHNLGSIMEGGDGLEKIMDS 406

Query: 343 LLTA 346
           +   
Sbjct: 407 VRGW 410


>gi|311747486|ref|ZP_07721271.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
 gi|126574844|gb|EAZ79215.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
          Length = 315

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 8/315 (2%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              I    +  + Y+  ++  +DL  +   +++D    +    E    +  + ELE    
Sbjct: 1   MKQIQARKTWTTSYENLEKAIEDLEVLYEFYSADEVSEEEMSREFEKAKSTVEELEL--- 57

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              +    +D  + +LEI  G GG+E+  +   L RMY  +     +KV  +     D  
Sbjct: 58  -KKMLSSEEDQLNAVLEINPGAGGTESNDWASILMRMYIMWGEKNGYKVREVDVQQGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDI 217
           G K       G   +  +K E+GVHR+ R+   ++ GR HTS A+V   PE    I++DI
Sbjct: 117 GIKSCTLEFEGPLAYGFLKSETGVHRLVRISPFDSGGRRHTSFASVYAYPEVDDSIEIDI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRAR 276
              DI + T R+ G+GGQ+VN  ++ V++TH PTGI +V   E+SQ  NR +AM++L++R
Sbjct: 177 NPADIELHTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQIERSQLANREKAMQMLKSR 236

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           L+ +E ++   E +     ++   D   +IR Y     + + D R        ++VL G 
Sbjct: 237 LFQLEVEKRNAEIAKIESSKLR-VDFGSQIRNYVLHPYKLVKDARTGHETSDTQHVLDGG 295

Query: 336 IDDIINPLLTAHQAK 350
           +++ +   L A   +
Sbjct: 296 LNEFMKAYLLAQSEE 310


>gi|73666975|ref|YP_302991.1| peptide chain release factor 2 [Ehrlichia canis str. Jake]
 gi|72394116|gb|AAZ68393.1| bacterial peptide chain release factor 2 (bRF-2) [Ehrlichia canis
           str. Jake]
          Length = 335

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 97/340 (28%), Positives = 172/340 (50%), Gaps = 18/340 (5%)

Query: 16  FAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
             ++ ++ S +           +  E A +S II+  +  +++     +L  V+ +   +
Sbjct: 2   LVDLNVQCSSTSLWTDNALAQNILSERARVSKIITSFTELEEEFNYYTELLDVVKNDTDE 61

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
                   +  L    + +E+E       L  +  D   C +EI++G GG+E+  +   L
Sbjct: 62  LLNDIEIGLTKLKERIQKKEVE------CLFSNEADQNDCFIEIQSGAGGTESNDWSCML 115

Query: 133 FRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
            RMY R+A     +  E++   D ++ G K     ++G   +   K ESG+HR+ R+   
Sbjct: 116 LRMYVRWAEIYHNFTTEIVYKLDGEEVGIKSATIKVTGDNAYGWSKTESGIHRLVRISPF 175

Query: 192 EASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            ++ + HT+ +++ V P   E  +++   +D+RIDT RASG+GGQHVN T+SAVRITHIP
Sbjct: 176 NSNAKRHTTFSSILVSPITDENINIETLDKDLRIDTYRASGAGGQHVNKTESAVRITHIP 235

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSERIR 307
           +GI+V   + +SQHQN   A  +L++RLY ++ +    + +    ++  IG G+   +IR
Sbjct: 236 SGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGN---QIR 292

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y     + + D R    +  +  VL G +D  I   LTA
Sbjct: 293 SYIMHPYQMVKDVRTGHEIGNVNSVLDGNLDPFIISALTA 332


>gi|317151025|ref|XP_001824394.2| peptide chain release factor 1 [Aspergillus oryzae RIB40]
          Length = 427

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 110/365 (30%), Positives = 193/365 (52%), Gaps = 28/365 (7%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
             +++   ++ S       ++ +    ++PI + +  +D+  +   +L+ ++ D ++D E
Sbjct: 53  EHSKLSAHLASSFDG----RIAKRVGELAPIANVLDEWDRANESISELNALLFDPDTDLE 108

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
           ++ LA  ++  ++  +  +   +   L+P+       C+LEIR G GG EA LF  +L R
Sbjct: 109 LKSLAIEDLETVKAALPTISENLKKALVPRHPFAALPCLLEIRPGAGGDEAGLFAFELLR 168

Query: 135 MYERYAALRKWKVEVLSSSDND---DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           MY  + + R ++  V+     D   +    E V  +   G +  ++ ESGVHRVQRVPAT
Sbjct: 169 MYTAFCSRRGFRSNVIKLEVGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPAT 228

Query: 192 EASGRVHTSAATVAVLPEAA---------------EIDVDIPLEDIRIDTMRASGSGGQH 236
           E  GR HTSA +V VLP                    D  +  +++R + MRA G+GGQH
Sbjct: 229 ETKGRTHTSAVSVMVLPSFPETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQH 288

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+R+TH+PTGI+V+    +SQH NR +A ++LRARL +  ++    +    R+ 
Sbjct: 289 VNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRG 348

Query: 296 ---QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAK 350
               +    R ++IRTYN+ Q R TDHR ++T++ L  VL G   ++ ++  + +    +
Sbjct: 349 VLGGVARMGRGDKIRTYNYGQSRCTDHRSSITIHNLNDVLDGGEGLETVMESVRSWLIDQ 408

Query: 351 MIGSA 355
            + + 
Sbjct: 409 EVAAL 413


>gi|298244286|ref|ZP_06968092.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
 gi|297551767|gb|EFH85632.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
          Length = 337

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 98/328 (29%), Positives = 171/328 (52%), Gaps = 10/328 (3%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV--IGDHNSDSEIRDLAQIE 82
           +        K       ++ +  +++ ++Q   + +DL  +  + +   D +++      
Sbjct: 2   QPDFWSDNRKAQAHMQQLNALREEVTTWEQLATQLKDLQELALMLEEEPDDDMQAEVAQS 61

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  IE++I +LE    + L+     D+K+ IL I AG+GG +A  +   L RMY R+A  
Sbjct: 62  IHPIEEQIEKLE----FALMLSGEHDEKNAILSIHAGSGGVDAQDWAEMLLRMYLRWADQ 117

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
            +++ ++   S+ ++ G K     I GR  +  ++ E+G HR+ R+   +A+ R  TS A
Sbjct: 118 HRFRTQIYDYSEGEEAGIKSATVEIEGRFAYGYLRSEAGTHRLIRLSPFDAAHRRQTSFA 177

Query: 203 TVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
            V ++P+        I  EDI +DT R++G+GGQHVN TDSAVR+ H+P+GI+V   +E+
Sbjct: 178 KVELMPDIENTIEISIRPEDIEVDTYRSTGAGGQHVNKTDSAVRMRHVPSGIVVTCQNER 237

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRI-TDH 319
           SQ QNR  A+K+L+ARL+++E+K+   E +  +   +   D   +IR+       I  DH
Sbjct: 238 SQLQNREVALKILKARLFELEQKKHDEEAARLKGEHV-QADFGTQIRSVIVHPYNIAKDH 296

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAH 347
           R N         L G +D  I+  L   
Sbjct: 297 RTNHETSDTTAYLAGNVDPFIHAYLQEQ 324


>gi|194860855|ref|XP_001969666.1| GG23822 [Drosophila erecta]
 gi|190661533|gb|EDV58725.1| GG23822 [Drosophila erecta]
          Length = 392

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 120/324 (37%), Positives = 184/324 (56%), Gaps = 5/324 (1%)

Query: 38  EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEI 97
             A +  ++S +      +++      +  + + D     + +   + ++   ++ +  +
Sbjct: 58  RLAQLEGVVSALEQRRVLERQITSAKDMEAEKDED-MRELMREENEVYVDLLGKQDQALL 116

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
             LL   D +   + I  + AG GG EA LF  +L+ MY  +     W+ E  +S   D 
Sbjct: 117 QELLTLSDDEMYPALIFGLNAGAGGQEAMLFAQELYEMYTGFFEHMGWEWEEFASEITDI 176

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           GG +     +SG   F  ++ E+GVHRVQRVPATE SGR+HTS A++ V+P  A+I V I
Sbjct: 177 GGLRHASLMVSGEDAFRWLRHEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADIHVHI 236

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +D++I+T RASG+GGQHVNTTDSAVRI H+PTG+ V   SE+SQ +NR  AMK LR+R
Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQG- 334
           L   + +     + A +K Q GS +R+E+IRTYNF Q RITDHRI   T++ L+  L+G 
Sbjct: 297 LVQQQLESAEASKMATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTMHNLDGFLKGG 356

Query: 335 -YIDDIINPLLTAHQAKMIGSASE 357
             +  +I  L   H+ + +    +
Sbjct: 357 DQLCGLIEKLQLEHRKERLKELLD 380


>gi|115380059|ref|ZP_01467103.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
           DW4/3-1]
 gi|115362934|gb|EAU62125.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
           DW4/3-1]
          Length = 309

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 13/302 (4%)

Query: 48  KISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
                 +   + Q L  +  + N ++  ++   +        +     ++    +    +
Sbjct: 3   AFDKALRGLDDAQTLMELAREANDEASAQEAEGL-----LPTLEGDIAKLELARMLSGEN 57

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D  +C ++I AG GG+++  +   L RMY R+   R W+VE+      ++ G+K +   I
Sbjct: 58  DRSNCFMDINAGAGGTDSMDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHI 117

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDT 226
            G   +  +K E GVHR+ R+   +A+ R  T+ A+V V PE    I +DIP +D  +  
Sbjct: 118 RGEYAYGYLKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKF 177

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
           +R  G+GGQ VN T S  ++ H+PT I++   +E+SQ  N+  A K+LRARLY++E K+ 
Sbjct: 178 IRGGGAGGQKVNKTSSTAQLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKR 237

Query: 286 ANER--SANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
             ER  +  +K  I  G    +IR+Y  +  R + D R  +    ++ VL G ++  +  
Sbjct: 238 EAERDAAEAQKKDISFG---SQIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTA 294

Query: 343 LL 344
            L
Sbjct: 295 QL 296


>gi|296804966|ref|XP_002843310.1| peptide chain release factor 1 [Arthroderma otae CBS 113480]
 gi|238845912|gb|EEQ35574.1| peptide chain release factor 1 [Arthroderma otae CBS 113480]
          Length = 438

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 114/370 (30%), Positives = 193/370 (52%), Gaps = 30/370 (8%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           L    A +  + +ES               ++P+ + +  +D+  +   +L  +I + ++
Sbjct: 54  LAAEHATLSTKQAESFE----RAAARRLGELAPVANALKDWDRANESITELQGLINEPST 109

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D+E++ LAQ ++ +    +  L   +   L+P+    D  C++EIR G GG EA LF  +
Sbjct: 110 DAELKSLAQDDITSTIATLSSLSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAE 169

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHRV 185
           + RMY  + + R  +  ++     D  G        E V  I   G ++ ++ E+GVHRV
Sbjct: 170 MLRMYMAFCSSRGLRTAIIKKETEDGVGAGAEERLSEAVMEIETPGSYNILRTEAGVHRV 229

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEID--------------VDIPLEDIRIDTMRASG 231
           QRVPATEA GR HTSA +V +LP   + +                +  +D++ +  RASG
Sbjct: 230 QRVPATEAKGRTHTSAVSVMILPSFPDNNQGDSPLNFDDPNSDYYVNPQDVQSEKFRASG 289

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQHVN T+SAVR+THIPTG +++    +SQH+NR +A  +LRA+L    R+    E  
Sbjct: 290 AGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMM 349

Query: 291 ANRKLQIGSGD---RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLT 345
             R+  +G  +   R ++IRTYNF+Q R TDHR  +T++ +  V+ G   ++ I+  +  
Sbjct: 350 ELRRGAMGGVNKTGRGDKIRTYNFTQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQN 409

Query: 346 AHQAKMIGSA 355
               + + + 
Sbjct: 410 WLVDQEVEAL 419


>gi|260792424|ref|XP_002591215.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae]
 gi|229276418|gb|EEN47226.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae]
          Length = 353

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 132/328 (40%), Positives = 207/328 (63%), Gaps = 6/328 (1%)

Query: 31  AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI-GDHNSDSEIRDLAQIEVLAIEKE 89
            + +L + +  +  I+ K+   +  ++E  ++  ++ G  + ++E+RDLA  E  A E +
Sbjct: 13  EHRRLVQRWEELRHIVEKVQQVETTQKELVEVEKLLSGLEDGETEMRDLALQEKEAYEND 72

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
           ++ LE+EI  LL+P D  D+   ILE+ AG GG EA LF  D+F MY +YAA + W ++V
Sbjct: 73  MKHLEDEILTLLVPADEADENDIILEVVAGVGGQEAMLFTSDMFEMYCQYAAYKNWHMQV 132

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           L+   +  GG +   A+I G   +  +K E+GVHRVQRVP TE +GRVHTS  TVAVLP+
Sbjct: 133 LTMDTSTLGGLRHATASIKGLNAYKLLKLEAGVHRVQRVPKTEKAGRVHTSTMTVAVLPQ 192

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT--GIMVTSSEKSQHQNRL 267
             EID      + +I+T +ASG+GGQHVN T+SAVRI HIPT    +    E+SQ +NR 
Sbjct: 193 PKEIDNTWDKSEFKIETKKASGAGGQHVNKTESAVRIVHIPTGENAVECQQERSQLRNRA 252

Query: 268 RAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYK 327
            AM  ++ARLY ++  +  +++   R+ Q+G+  RSE+IRTYNF+Q R+TDHR  + ++ 
Sbjct: 253 IAMTTIQARLYQMKLDQQRSQQQLARQQQMGTAARSEKIRTYNFTQDRVTDHRAGVNMFN 312

Query: 328 LEYVLQGY--IDDIINPLLTA-HQAKMI 352
           L+  L G   +D++I+ +    H+ +++
Sbjct: 313 LQDFLLGGDRLDEMIHTVQQHLHREEVL 340


>gi|237740205|ref|ZP_04570686.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31]
 gi|262068161|ref|ZP_06027773.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC
           33693]
 gi|294782698|ref|ZP_06748024.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA]
 gi|229422222|gb|EEO37269.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31]
 gi|291378140|gb|EFE85658.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC
           33693]
 gi|294481339|gb|EFG29114.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA]
          Length = 308

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 11/306 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
            + +S Y++   E +D   +I    S     +     ++   K ++    E    LL   
Sbjct: 5   KNIVSRYEKLATEVEDEEVLIDFVESGESSFENE---LIEKHKTLKYDIEEFEVNLLLDG 61

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  + I+ I +G GG+EA  +   L+RMY R+  L+ +KV  L   + D  G K +  
Sbjct: 62  EYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVSELDFMEGDSVGVKSVTF 121

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   +  +K E GVHR+ R+   +A+ + HTS A+V V+PE  +  +V+I   DIRI
Sbjct: 122 LVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDNVEVEINPADIRI 181

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN TDSAVRITH PTG++V    E+SQ  NR  AMK+L+++L ++E K
Sbjct: 182 DTYRASGAGGQHVNMTDSAVRITHFPTGVVVTCQKERSQLSNRETAMKMLKSKLLEIELK 241

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDII 340
           +   E       +  IG G+   +IR+Y F     + DHR N  +  ++ V+ G IDD I
Sbjct: 242 KKEEEMKKIQGEQTDIGWGN---QIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFI 298

Query: 341 NPLLTA 346
           N  L  
Sbjct: 299 NSYLRW 304


>gi|302653122|ref|XP_003018392.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517]
 gi|291182035|gb|EFE37747.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517]
          Length = 438

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 115/371 (30%), Positives = 194/371 (52%), Gaps = 30/371 (8%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L    A +  + +ES          +    I+P+ + +  +D   +   +L  +I + +
Sbjct: 53  ALAAEHATLTAKQAESFE----RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPS 108

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D+E++ LA+ ++      +  L   +   L+P+    D  C++EIR G GG EA LF  
Sbjct: 109 TDTELKSLAEDDITTTIGTLSSLSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAA 168

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHR 184
           ++ RMY  + + R  +  ++     D  G        E+V  +   G ++ ++ E+GVHR
Sbjct: 169 EMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHR 228

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDI--------------PLEDIRIDTMRAS 230
           VQRVPATEA GR HTSA +V +LP   E + +                 +D++ +  RAS
Sbjct: 229 VQRVPATEAKGRTHTSAVSVMILPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRAS 288

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQHVN T+SAVR+THIPTG +++    +SQH+NR +A  +LRA+L    R+    E 
Sbjct: 289 GAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEM 348

Query: 290 SANRKLQIGSGD---RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLL 344
              R+  +G  +   R ++IRTYNF+Q R TDHR  +T++ +  V+ G   ++ II  + 
Sbjct: 349 MELRRGAMGGVNKTGRGDKIRTYNFTQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQ 408

Query: 345 TAHQAKMIGSA 355
           +    + + + 
Sbjct: 409 SWLVDQEVEAL 419


>gi|56751121|ref|YP_171822.1| peptide chain release factor 2 [Synechococcus elongatus PCC 6301]
 gi|56686080|dbj|BAD79302.1| peptide chain release factor RF-2 [Synechococcus elongatus PCC
           6301]
          Length = 304

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 9/306 (2%)

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
            + Q   +   +  ++      +   +          +  +          L     D +
Sbjct: 2   DWQQLDADITAILELLAIEPDPALFEEAETNVQRLQRELDQW-----ELQQLLSGPYDAE 56

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
             IL I AG GG++A  +   L RMY R+A  + +KV +   S+ ++ G K +   I G+
Sbjct: 57  GAILSINAGAGGTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGK 116

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRA 229
             +  +K E G HR+ R+    A+ +  TS A V V+P    +ID++IP +D+ I T RA
Sbjct: 117 YAYGYLKAEKGTHRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRA 176

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
            G GGQ+VN  ++AVRI H+PTG+ V  + E+SQ QN+ +A+ +LRA+L  V +++ A E
Sbjct: 177 GGKGGQNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILRAKLLVVLQEQKAKE 236

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +  R   +       +IR Y F   + + D R  +    +  V+ G ++  I   L   
Sbjct: 237 VAEIRGDMVE-AAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQD 295

Query: 348 QAKMIG 353
              +I 
Sbjct: 296 NQMLIE 301


>gi|269123112|ref|YP_003305689.1| peptide chain release factor 2 [Streptobacillus moniliformis DSM
           12112]
 gi|268314438|gb|ACZ00812.1| bacterial peptide chain release factor 2 (bRF- 2) [Streptobacillus
           moniliformis DSM 12112]
          Length = 362

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 11/321 (3%)

Query: 28  SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIE 87
             +    + +E + +   I  IS      +  Q L           E  +   +E +   
Sbjct: 48  DQNKSQNVLKEISLLKERIKDISKLLTLNENIQILLEFYKQEEISLEELETETLEFIKEL 107

Query: 88  KEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKV 147
                  ++    LL     D  S IL I AG GG+E+  +V  L+RMY+R+A   K+KV
Sbjct: 108 -------DKFKIKLLLNGKYDKNSAILTINAGAGGTESCDWVSMLYRMYDRWAMQNKFKV 160

Query: 148 EVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVL 207
           EVL     D+ G K I  +I G   +  +  E GVHR+ R+   +++ R HTS A V V+
Sbjct: 161 EVLDILAGDEAGIKSITLSIKGDYAYGYLDCEKGVHRLVRISPFDSNARRHTSFAAVNVI 220

Query: 208 PEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQN 265
           PE  +  +V++  ED++IDT RASG+GGQHVNTTDSAVRITHIPTGI+V   +E+SQ++N
Sbjct: 221 PEIEDDVEVNLKKEDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVICQNERSQNKN 280

Query: 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLT 324
              AMKVLRA+L+++E K   NE +  + +Q    +   +IR+Y F     + DHR N  
Sbjct: 281 LNSAMKVLRAKLFEIELKNRENEINDLKGVQ-SKIEWGSQIRSYVFQPYKMVKDHRTNHE 339

Query: 325 LYKLEYVLQGYIDDIINPLLT 345
              ++ V+ G I+  I+  L 
Sbjct: 340 ENNVDKVMDGDINIFIDEYLK 360


>gi|22298070|ref|NP_681317.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
 gi|22294248|dbj|BAC08079.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
          Length = 290

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 132/258 (51%), Gaps = 4/258 (1%)

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
           N      L     D  + I+ I AG GG++A  +   L RMY R+A    ++  +   S+
Sbjct: 32  NRWELEQLLSGPYDKNNAIVTINAGAGGTDAQDWAEMLLRMYTRWAERHGYQTHLAELSE 91

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            ++ G K     I GR  +  ++ E G HR+ R+    A+G+  TS A V V+PE    +
Sbjct: 92  GEEAGIKSATLEIRGRYAYGYLRSEKGTHRLVRISPFNANGKRQTSFAGVDVMPELDQSV 151

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
            V+IP  D+ I T R+ G GGQ+VN  ++AVRI H PTG+ V  + E+SQ QN+ +A+ +
Sbjct: 152 TVEIPESDLEITTSRSGGKGGQNVNKVETAVRIVHKPTGLAVRCTQERSQLQNKEKALAI 211

Query: 273 LRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYV 331
           L+A+L  + +++ A E +  R   +       +IR Y F   + + D R  +    ++ V
Sbjct: 212 LKAKLLVIAQEQKAKEIADIRGEAVE-AAWGNQIRNYVFHPYQLVKDLRTEVETTAIQDV 270

Query: 332 LQGYIDDIINPLLTAHQA 349
           + G +D  I   L    A
Sbjct: 271 MDGNLDPFIQAYLRQQTA 288


>gi|81299215|ref|YP_399423.1| peptide chain release factor 2 [Synechococcus elongatus PCC 7942]
 gi|81168096|gb|ABB56436.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus
           elongatus PCC 7942]
          Length = 304

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 85/306 (27%), Positives = 146/306 (47%), Gaps = 9/306 (2%)

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
            + Q   +   +  ++      +   +          +  +          L     D +
Sbjct: 2   DWQQLDADITAILELLAIEPDPALFEEAETNVQRLQRELDQW-----ELQQLLSGPYDAE 56

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
             IL I AG GG++A  +   L RMY R+A  + +KV +   S+ ++ G K +   I G+
Sbjct: 57  GAILSINAGAGGTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGK 116

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRA 229
             +  +K E G HR+ R+    A+ +  TS A V V+P    +ID++IP +D+ I T RA
Sbjct: 117 YAYGYLKAEKGTHRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRA 176

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
            G GGQ+VN  ++AVRI H+PTG+ V  + E+SQ QN+ +A+ +L+A+L  V +++ A E
Sbjct: 177 GGKGGQNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILKAKLLVVLQEQKAKE 236

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            +  R   +       +IR Y F   + + D R  +    +  V+ G ++  I   L   
Sbjct: 237 VAEIRGDMVE-AAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQD 295

Query: 348 QAKMIG 353
              +I 
Sbjct: 296 NQMLIE 301


>gi|298208407|ref|YP_003716586.1| putative peptide chain release factor [Croceibacter atlanticus
           HTCC2559]
 gi|83848330|gb|EAP86199.1| putative peptide chain release factor [Croceibacter atlanticus
           HTCC2559]
          Length = 316

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 88/316 (27%), Positives = 157/316 (49%), Gaps = 8/316 (2%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              ++   + +  Y+Q     +DL  +   +          +      +  I +LE    
Sbjct: 1   MKELNVKKTWVEDYEQAITFVEDLEVIFEFYKEGEAEETNVKERYAKAKDLIEDLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  +  DD S +L+I AG GG+E+  +   L RMY  +A  R +K++ L+  + D  
Sbjct: 57  FKNMLSEEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWAEKRGFKIKELNLQNGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++DI
Sbjct: 117 GIKTVSLEIEGNFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIDI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRAR 276
              DI  D  R+SG+GGQ+VN  ++   +TH P+GI++  S  +SQ +NR +AM++L+++
Sbjct: 177 NPADISWDFARSSGAGGQNVNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQMLKSQ 236

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           LY++E ++   +R      ++   +   +IR Y     + + D R       ++ V+ G 
Sbjct: 237 LYEIELRKQQAQRDEIESSKMK-IEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGD 295

Query: 336 IDDIINPLLTAHQAKM 351
           ID  +   L A   K 
Sbjct: 296 IDAFLKAFLMASGQKQ 311


>gi|303310501|ref|XP_003065262.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240104924|gb|EER23117.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034924|gb|EFW16867.1| peptide chain release factor 1 [Coccidioides posadasii str.
           Silveira]
          Length = 438

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 116/370 (31%), Positives = 188/370 (50%), Gaps = 44/370 (11%)

Query: 21  LRMSESPSVDAYIKLTEEYA-------------------AISPIISKISIYDQKKQEEQD 61
            R+     ++    L  EYA                    ++  +  +  +D+  +   +
Sbjct: 37  ERLLSPALLNHARNLAREYATLSERLAGSFEKETAKRVGELTATVQALKEWDKAHESIAE 96

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L+ ++ D +SD E+R+LA  ++      +  L  ++   L+P+    +  C++EIR G G
Sbjct: 97  LNHLLDDPSSDPELRELASDDLQTTVSSLFALSGKLKESLIPRHPFAELPCLVEIRPGAG 156

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG-------YKEIVATISGRGVFS 174
           G EA LF  +L RMY  + +    +  +L     D  G         E V  I   G ++
Sbjct: 157 GDEAGLFASELLRMYLAFCSRHGLRTAILKKDVEDGAGGSGSEDRLSEAVMEIEAPGSYN 216

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA------------AEIDVDIPLEDI 222
            ++ E+GVHRVQR+PATEA GRVHTSA +V +LP                 D  I  +D+
Sbjct: 217 ILRTEAGVHRVQRIPATEAKGRVHTSAVSVMILPSFSEQNDSALNFDDPNSDYYINPQDV 276

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVE 281
           + + MRASG+GGQHVN T+SA+R+TH+PT  +V     +SQH+NR +A ++LR+++  + 
Sbjct: 277 QSEKMRASGAGGQHVNKTESAIRLTHVPTSTVVAVQDSRSQHENRRKAWRLLRSKIAQMR 336

Query: 282 RKRMANERSANRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YI 336
           R+    E    R+  +G      R +++RTYNF Q R TDHR  +T++ L  VL G   +
Sbjct: 337 REAREQELVELRRGIMGGVARMGRGDKVRTYNFGQNRCTDHRSGVTIHNLGSVLDGGEGL 396

Query: 337 DDIINPLLTA 346
           D+I+  +   
Sbjct: 397 DNIMESVSNW 406


>gi|154483104|ref|ZP_02025552.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
           27560]
 gi|149735912|gb|EDM51798.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
           27560]
          Length = 286

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 107/289 (37%), Positives = 161/289 (55%), Gaps = 8/289 (2%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G+  +D+ I +  + E      E      +     L     D  + I++I AG GG+E+
Sbjct: 1   MGEEENDASIVEEVEQETKEFIDEFE----KTKIETLLSGEYDKNNAIVKINAGAGGTES 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L+RMY R+A  + +K EVL   D D+ G K I   ++G   +  +K E GVHR+
Sbjct: 57  CDWASMLYRMYTRWAESKGYKTEVLDFLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS A+  V+P+  E  DV+I  +DIRIDT R+SG+GGQH+N T SAV
Sbjct: 117 VRISPFNAAGKRQTSFASCDVMPDIEEDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH PTGI+V   +E+SQ QN+ +AMK+L+A+LY ++++    +RS  R  +I      
Sbjct: 177 RITHNPTGIVVQCQNERSQLQNKDKAMKMLKAKLYVLKKQEEEEKRSGIR-GEIKEIGWG 235

Query: 304 ERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
            +IR+Y       + DHR N  +  +  V+ GYID  IN  L     K 
Sbjct: 236 SQIRSYVMQPYTMVKDHRTNQEITDVGKVMDGYIDPFINAYLKWINIKK 284


>gi|78188007|ref|YP_378345.1| peptide chain release factor 2 [Chlorobium chlorochromatii CaD3]
 gi|78170206|gb|ABB27302.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           chlorochromatii CaD3]
          Length = 312

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 102/314 (32%), Positives = 159/314 (50%), Gaps = 12/314 (3%)

Query: 37  EEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENE 96
           +E A +     +      K +  QD   +  +   +S   +L          E+ +    
Sbjct: 3   KELADLKSWTDEYDKLSAKARYCQDEMDIALELQDESFGDELTNT-----ITELEQAIAA 57

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
           I +  +    DD  + ++ I AG GG+EA  +   L+RMY R+A  + +K       + D
Sbjct: 58  IEFRNMLSGKDDAGNAMVTIHAGAGGTEAQDWAEMLYRMYMRWAERKGFKTFTDDYQEGD 117

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DV 215
             G K     I G   +  +K E+GVHR+ RV   +A+ R HTS A+V   PEA    ++
Sbjct: 118 GAGIKTATLEIQGAYAYGYLKAENGVHRLVRVSPFDANARRHTSFASVYTYPEAPPDVEI 177

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           ++  ED+ + T R+ G GGQ+VN  ++AVRI H+PTGI+V    E+SQ QNR RAMK+L 
Sbjct: 178 EVRKEDLELSTFRSGGKGGQNVNKVETAVRIKHLPTGIVVGCQEERSQLQNRERAMKMLM 237

Query: 275 ARLYDVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           A+LY  +R+    ++     +K +I  G    +IR+Y     RI DHR N   + +E VL
Sbjct: 238 AQLYQRQREEEDAKKREIEGKKKKIEWG---SQIRSYVLDDRRIKDHRTNYERFDIETVL 294

Query: 333 QGYIDDIINPLLTA 346
            G +DD +   L+ 
Sbjct: 295 DGDLDDFMEKYLSQ 308


>gi|282900531|ref|ZP_06308475.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194584|gb|EFA69537.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 291

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 9/289 (3%)

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     +  +++             +          L     D +  +L I AG GG+
Sbjct: 3   ELLELEADEGLLQEAETTINQMHRDLDQW-----ELQQLLSGPYDSQGAVLTINAGAGGT 57

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +A  +   L RMY R+A    +KV +   S+ D+ G K     I+GR  +  ++ E G H
Sbjct: 58  DAQDWAFMLMRMYTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTH 117

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+    A+G+  TS A V V+P+       +IP +D+ I T RA G GGQ+VN  ++
Sbjct: 118 RLVRISPFNANGKRQTSFAGVEVMPQIDNSVTLEIPEKDLEITTSRAGGKGGQNVNKVET 177

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRI HIPTG+ V  + E+SQ QN+ +A+  L+A+L  + R++ A E +  R   +    
Sbjct: 178 AVRIVHIPTGVAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVE-AS 236

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
              +IR Y F   + + D R NL    +  V+ G +D+ I   L     
Sbjct: 237 WGNQIRNYVFHPYQIVKDLRTNLETTAIGDVMNGDLDNFIQAYLRQENQ 285


>gi|86132182|ref|ZP_01050777.1| peptide chain release factor 2 [Dokdonia donghaensis MED134]
 gi|85817101|gb|EAQ38284.1| peptide chain release factor 2 [Dokdonia donghaensis MED134]
          Length = 316

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 158/317 (49%), Gaps = 12/317 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +      ++ Y++ +   +DL  +           +  Q         I ++E    
Sbjct: 1   MKTLRSKKKWVTDYEEAQTFVEDLEVLYEFAKEGEAPEENVQARYEKAASFIEDIE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  +  D+ SC+L+I AG GG+E+  +   L RMY  YA  + WKV+ L+  + D  
Sbjct: 57  FRNMLSEEGDELSCVLQITAGAGGTESCDWASMLMRMYLMYAEKQGWKVKELNFQEGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++++
Sbjct: 117 GIKTVSLEIEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEL 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              D  I T R+SG+GGQ+VN  ++ V++TH PTGI +  S  +SQH NR +A+++LR++
Sbjct: 177 NPADYDIVTARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQ 236

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQ 333
           LY++E ++    R+A    K  I  G    +IR Y     + + D R  +     + VL 
Sbjct: 237 LYELELRKQMEARNAIEADKKAIEWG---SQIRNYVLHPYKLVKDVRTAVETGNTDAVLD 293

Query: 334 GYIDDIINPLLTAHQAK 350
           G ID  +   L     +
Sbjct: 294 GNIDLFLKGYLMMMGQE 310


>gi|315223860|ref|ZP_07865708.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
 gi|314946190|gb|EFS98191.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
          Length = 315

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 158/312 (50%), Gaps = 12/312 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +      +  Y++ +    D+  ++          +    +       I  LE    
Sbjct: 1   MRELRTKKKWVEDYEEAENLTSDIEVLLDFFKEGEATAEDVDHQYTQALHAIEALE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  D  D  S +L+I AG GG+E+  +   L RMY  +   +K+KV+ L+  + D  
Sbjct: 57  FRNMLSDEGDTMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++DI
Sbjct: 117 GIKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRAR 276
              DI  +TMR+SG+GGQ+VN  ++AVR+ H PTGI++  S  +SQ  N+ +A+++L+++
Sbjct: 177 NPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQ 236

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQ 333
           LY++E K+   +R      K++I  G    +IR Y     + + D R N     ++ V+ 
Sbjct: 237 LYEIELKKRQAKRDEIEAGKMKIEWG---SQIRNYVMHPYKLVKDVRTNYESTDVDSVMN 293

Query: 334 GYIDDIINPLLT 345
           G +D+ +   L 
Sbjct: 294 GELDEFLKAYLM 305


>gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 238

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 93/237 (39%), Positives = 137/237 (57%), Gaps = 8/237 (3%)

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           + I AG GG EA  +   L RMY R+   R +K ++   ++ + GG K     I G   +
Sbjct: 1   MVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAY 60

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGS 232
             +K E GVHR+ R+   ++S R HTS A++ + PE   ++ V+I  +D+RIDT RASG+
Sbjct: 61  GYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGA 120

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN TDSAVRITHIPTG++  + +E+SQ QN+  AMK+L A+L  ++ +    +   
Sbjct: 121 GGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIED 180

Query: 292 NRKL--QIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +    QI  G    +IR+Y F     + DHR N  +  +E V+ G ID  I+  L 
Sbjct: 181 IQGNYTQIAWG---SQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLA 234


>gi|237743972|ref|ZP_04574453.1| peptide chain release factor 2 [Fusobacterium sp. 7_1]
 gi|256027415|ref|ZP_05441249.1| peptide chain release factor 2 [Fusobacterium sp. D11]
 gi|289765378|ref|ZP_06524756.1| peptide chain release factor 2 [Fusobacterium sp. D11]
 gi|229433003|gb|EEO43215.1| peptide chain release factor 2 [Fusobacterium sp. 7_1]
 gi|289716933|gb|EFD80945.1| peptide chain release factor 2 [Fusobacterium sp. D11]
          Length = 308

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 113/306 (36%), Positives = 163/306 (53%), Gaps = 11/306 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
            + +S Y++   E +D   +I    S     +    E   I K       E    LL   
Sbjct: 5   KNIVSRYEKLATEIEDEEVLIDFVESGETSFESELSEKHKILKNDV---EEFEINLLLDG 61

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  + I+ I +G GG+EA  +   L+RMY R+  L+ +KV  L   + D  G K +  
Sbjct: 62  EYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVTELDFMEGDSVGVKSVTF 121

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   +  +K E GVHR+ R+   +A+ + HTS A+V V+PE  E  +V+I   DIRI
Sbjct: 122 LVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEIDPADIRI 181

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN TDSAVRITH P+GI+V    E+SQ  NR  AMK+L+++L ++E K
Sbjct: 182 DTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIK 241

Query: 284 RMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDII 340
           +   E       +  IG G+   +IR+Y F     + DHR N  +  ++ V+ G IDD I
Sbjct: 242 KKEEEMKKIQGEQSDIGWGN---QIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFI 298

Query: 341 NPLLTA 346
           N  L  
Sbjct: 299 NSYLRW 304


>gi|88797976|ref|ZP_01113563.1| peptide chain release factor 2 [Reinekea sp. MED297]
 gi|88779173|gb|EAR10361.1| peptide chain release factor 2 [Reinekea sp. MED297]
          Length = 280

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 98/285 (34%), Positives = 154/285 (54%), Gaps = 11/285 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D         E+  +++++ ELE    +  +     D  +  L+I+AG+GG+EA
Sbjct: 1   MAVEEDDEGSVADVSEELAGLQRQLEELE----FRRMFSGEMDPSNAYLDIQAGSGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+   + +K E++ +S  D  G K       G   F  ++ E+GVHR+
Sbjct: 57  QDWAEMLLRMYLRWGEEKGFKTELMEASAGDVAGIKSATVRFEGEYAFGWLRTETGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    ++  R HTS ++V V PE  +  +++I   D+RID  RASG+GGQHVN T+SAV
Sbjct: 117 VRKSPFDSGNRRHTSFSSVFVSPEIDDNVEIEINPADLRIDVYRASGAGGQHVNRTESAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE--RKRMANERSANRKLQIGSGD 301
           RITH PTGI+    +++SQH+N+ +AMK L+A+LY+ E  +++ A +   + K  IG G 
Sbjct: 177 RITHEPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEREMLQRQEAAQLVEDNKSDIGWG- 235

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y     RI D R  +     + VL G +D  I   L  
Sbjct: 236 --SQIRSYVLDDARIKDLRTGVENRNTQAVLDGALDPFIEASLKQ 278


>gi|332295608|ref|YP_004437531.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM
           14796]
 gi|332178711|gb|AEE14400.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM
           14796]
          Length = 363

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 11/347 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            + +   +  EI   +S         K +        +   I  ++      +D   +  
Sbjct: 21  DLDNKIKKLEEIRNDLSNPEIWQDVQKSSNLTQLADNLQKSIDEWNNLNSSFEDF--LFW 78

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               D    +        + K + ELE       L     D    +L I AG GG +A  
Sbjct: 79  TEFQDEGAENEIAESYKNLVKILEELEV----KALLSGKYDSYDAMLSISAGAGGVDAQD 134

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           F   L RMY R+    K+ VE++  S  D+ G +       G+  +  +K E GVHR+ R
Sbjct: 135 FAEMLLRMYIRWGEKNKYSVELVDQSPGDEAGIRSATIFFKGKYSYGFLKSEQGVHRLIR 194

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   + + R HTS   V V P      ++++  E+I+I+T RASG+GGQHVN TDSAVRI
Sbjct: 195 LSPFDFNNRRHTSFVLVEVTPLIENVKEINVKNEEIKIETFRASGAGGQHVNKTDSAVRI 254

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTGI+V   +E+SQ QN+  AMK+L +RL  +  ++  ++ S  +          ++
Sbjct: 255 THLPTGIVVTCRNERSQFQNKEAAMKILISRLNSLYEEKQKDKMSEFKGE--TDASWGKQ 312

Query: 306 IRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           IRTY       + DHR N+ +  +  VL G ID+     L     + 
Sbjct: 313 IRTYVMHPYTMVKDHRTNVEIGDVYGVLDGNIDEFQKAFLLKESKEK 359


>gi|320449740|ref|YP_004201836.1| peptide chain release factor 2, programmed [Thermus scotoductus
           SA-01]
 gi|320149909|gb|ADW21287.1| peptide chain release factor 2, programmed [Thermus scotoductus
           SA-01]
          Length = 307

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 10/310 (3%)

Query: 50  SIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
             +   + + + L  +  +        +  +     + +  ++LE+   +  L      +
Sbjct: 2   DTFRSLESDLEGLLELWQE-----FPAEEREALRPELLEAAKKLESLY-HETLLSFPHAE 55

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
           K+ IL I+ G GG+EA  +   L RMY R+A  + ++VEV+  +   + G       + G
Sbjct: 56  KNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDVTPGAEAGIDYAQIIVRG 115

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMR 228
              +  +  E+GVHR+ R    +ASGR HTS A V V+PE  +  +V I  ED+RID  R
Sbjct: 116 ENAYGLLAPEAGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFR 175

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           + G GGQ VNTTDSAVRI H+PTGI V   + +SQ +N+  AMKVLR+RLY++E K+   
Sbjct: 176 SQGHGGQGVNTTDSAVRIVHLPTGITVTCQTTRSQIKNKELAMKVLRSRLYELEWKKKQE 235

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           E    R  ++   +   +IR+Y   +  + DHR  L  +  + VL G + D I   L   
Sbjct: 236 ELRKLR-GEVRPIEWGSQIRSYVLDKQYVKDHRTGLMRFDPQNVLDGDLLDFIWAGLEW- 293

Query: 348 QAKMIGSASE 357
           +A    +  E
Sbjct: 294 KAGRRQAVEE 303


>gi|289675203|ref|ZP_06496093.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           FF5]
 gi|302185552|ref|ZP_07262225.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           642]
 gi|330896019|gb|EGH28242.1| peptide chain release factor 2 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330936871|gb|EGH41012.1| peptide chain release factor 2 [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330968992|gb|EGH69058.1| peptide chain release factor 2 [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330975436|gb|EGH75502.1| peptide chain release factor 2 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 248

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 98/249 (39%), Positives = 139/249 (55%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S  +  G K
Sbjct: 1   MFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  ++DI   
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPA 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRARLY+
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++     +   + K  IG G    +IR+Y     RI D R N+     + VL G ID
Sbjct: 181 QEVQKRNAASQALEDTKSDIGWG---HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDID 237

Query: 338 DIINPLLTA 346
           + +   L  
Sbjct: 238 EYLIASLKQ 246


>gi|332827204|gb|EGJ99978.1| hypothetical protein HMPREF9455_03672 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 318

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 87/324 (26%), Positives = 152/324 (46%), Gaps = 19/324 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              I  +   I  Y++ K   ++L              +          K +  LE    
Sbjct: 1   MKIIRGLKGWIEGYEEVKGAAEELQLAFDFQKEGVTSEEEVDAAYENAVKLVENLEL--- 57

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              + +  +D    +L++ +G GG+E   +   LFRMY+R+   R +K  +    D D+ 
Sbjct: 58  -KNMLRREEDKLGAVLKVNSGAGGTEGQDWASMLFRMYQRWCDARGYKTTITHWQDGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K     + G   +  +K E+GVHR+ RV    A G+  TS A+V V+P     I++++
Sbjct: 117 GIKTATLQVEGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVYVVPLVDDTIEIEV 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLR 268
              DI  DT R+SG+GGQ+VN  ++ VR+ +             ++  +  +SQ  N+  
Sbjct: 177 NQSDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQFGNKDN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           A+++L+++LY++E +R + E+S     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AIRLLKSQLYEMELERRSREQSKIEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAK 350
            +  V+ G +DD I   L  +  +
Sbjct: 294 NVNAVMDGDLDDFIKAYLMEYGEE 317


>gi|326470521|gb|EGD94530.1| peptide chain release factor 1 [Trichophyton tonsurans CBS 112818]
          Length = 438

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 115/371 (30%), Positives = 194/371 (52%), Gaps = 30/371 (8%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L    A +  + +ES          +    I+P+ + +  +D   +   +L  +I + +
Sbjct: 53  ALAAEHATLTAKQAESFE----RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPS 108

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D+E++ LA+ ++      +  L + +   L+P+    D  C++EIR G GG EA LF  
Sbjct: 109 TDTELKSLAEDDITTTIGTLSSLSDTLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAA 168

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHR 184
           ++ RMY  + + R  +  ++     D  G        E+V  +   G ++ ++ E+GVHR
Sbjct: 169 EMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHR 228

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDI--------------PLEDIRIDTMRAS 230
           VQRVPATEA GR HTSA +V +LP   E + +                 +D++ +  RAS
Sbjct: 229 VQRVPATEAKGRTHTSAVSVMILPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRAS 288

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQHVN T+SAVR+THIPTG +++    +SQH+NR +A  +LRA+L    R+    E 
Sbjct: 289 GAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEM 348

Query: 290 SANRKLQIGSGD---RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLL 344
              R+  +G  +   R ++IRTYNF+Q R TDHR  +T++ +  V+ G   ++ II  + 
Sbjct: 349 MELRRGAMGGVNKTGRGDKIRTYNFTQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQ 408

Query: 345 TAHQAKMIGSA 355
                + + + 
Sbjct: 409 NWLVDQEVEAL 419


>gi|114569849|ref|YP_756529.1| peptide chain release factor 2 [Maricaulis maris MCS10]
 gi|114340311|gb|ABI65591.1| bacterial peptide chain release factor 2 (bRF-2) [Maricaulis maris
           MCS10]
          Length = 321

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 17/321 (5%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             E   +   I+ +   +Q+  +  ++  +    +    + +         E+       
Sbjct: 1   MRERNRLEAAITTVVEAEQEYSDSLEIIELAEMEDDAEMVEEAVAGLNALAERM-----R 55

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D     +EI +G GG+E+  +   L RMY R+A    +KVE +     
Sbjct: 56  RAQLETLLSGEADGNDAFVEIHSGAGGTESQDWAAMLARMYSRWANAHGYKVETMEEQAG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEID 214
           ++ G K     + G   +  +K E+GVHR+ R+   ++S R HTS ++V V P+    ID
Sbjct: 116 EEAGLKSTTILVKGENAYGWLKTEAGVHRLVRISPFDSSARRHTSFSSVGVYPQIDDAID 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH-----IPTGIMVTSSEKSQHQNRLRA 269
           VDI +  +R DT RASG+GGQH+N TDSAVR+T+         ++   +++SQH+NR +A
Sbjct: 176 VDIDVSKVRTDTYRASGAGGQHINKTDSAVRLTYDMPGEEKPVVVQCQNDRSQHKNRSQA 235

Query: 270 MKVLRARLYDVE--RKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLY 326
             +LRAR+Y++E  R+  A +  A+ K +IG G    +IR+Y     + + D R N+   
Sbjct: 236 WDMLRARVYEIELQRREAAAQAEADSKSEIGWG---HQIRSYVLQPYQMVKDLRTNVETS 292

Query: 327 KLEYVLQGYIDDIINPLLTAH 347
               VL G +DD +   L A 
Sbjct: 293 NTGGVLDGDLDDFMAAALAAR 313


>gi|83773134|dbj|BAE63261.1| unnamed protein product [Aspergillus oryzae]
          Length = 388

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 187/346 (54%), Gaps = 24/346 (6%)

Query: 34  KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIREL 93
           ++ +    ++PI + +  +D+  +   +L+ ++ D ++D E++ LA  ++  ++  +  +
Sbjct: 29  RIAKRVGELAPIANVLDEWDRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTI 88

Query: 94  ENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSS 153
              +   L+P+       C+LEIR G GG EA LF  +L RMY  + + R ++  V+   
Sbjct: 89  SENLKKALVPRHPFAALPCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLE 148

Query: 154 DND---DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA 210
             D   +    E V  +   G +  ++ ESGVHRVQRVPATE  GR HTSA +V VLP  
Sbjct: 149 VGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 208

Query: 211 A---------------EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
                             D  +  +++R + MRA G+GGQHVN T+SA+R+TH+PTGI+V
Sbjct: 209 PETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVV 268

Query: 256 T-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL---QIGSGDRSERIRTYNF 311
           +    +SQH NR +A ++LRARL +  ++    +    R+     +    R ++IRTYN+
Sbjct: 269 SMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNY 328

Query: 312 SQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSA 355
            Q R TDHR ++T++ L  VL G   ++ ++  + +    + + + 
Sbjct: 329 GQSRCTDHRSSITIHNLNDVLDGGEGLETVMESVRSWLIDQEVAAL 374


>gi|120602348|ref|YP_966748.1| peptide chain release factor 2 [Desulfovibrio vulgaris DP4]
 gi|120562577|gb|ABM28321.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
           vulgaris DP4]
          Length = 310

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 109/308 (35%), Positives = 166/308 (53%), Gaps = 13/308 (4%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +   I+++   +  + +  +   +  +  S   +  L           + +L  E    L
Sbjct: 2   LEGEINRLEALETCRNDVSEWLLLAEEDESAEALESLE-----EQIIRLEQLIEETEMNL 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           L    +D  + +LEI  G GG+EA  +   L RMY R+A    +K E L   D D+ G K
Sbjct: 57  LLSGKEDRFAALLEIHPGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLE 220
            +   I+G   +  +K E G+HR+ R+   +ASGR HTS A+V V+P+   +I ++I   
Sbjct: 117 SVTLRIAGPNAYGLLKGERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDT 176

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  R+SG GGQ VNTT SAVR+THIPTGI+    +EKSQH N+  A+++LR RLY+
Sbjct: 177 DLRIDVFRSSGPGGQSVNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYE 236

Query: 280 VERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYI 336
           +E +++  E+ A    K  IG G    +IRTY     R + DHR N  +  +E VL G +
Sbjct: 237 LELRKLEEEKKAQYGAKDAIGFG---SQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRL 293

Query: 337 DDIINPLL 344
           D ++   L
Sbjct: 294 DKLLRDYL 301


>gi|83814103|ref|YP_445897.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855]
 gi|83755497|gb|ABC43610.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855]
          Length = 378

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 99/377 (26%), Positives = 166/377 (44%), Gaps = 30/377 (7%)

Query: 1   MVFLSHKQICDLKNRFA----------------EIELRMSESPSVDAYIKLTEEYAAISP 44
           M   S + +  L  R                  E+     +    D   +  E    I+ 
Sbjct: 1   MKSYSDEDLEQLAERVEALGGYLDVDGRRMTVEELNQERMDPDFWDDPDRAREIEKRIAR 60

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
               I  ++  K++ +D+ T+      + E          A  +++ +  + +    L  
Sbjct: 61  EEEWIEAWEDVKEQAEDIETLQLLSEEEGEDMSDEID---AEARKLEQKLDRLELESLLD 117

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
           D DD++  I+EI  G GG+E+  +   L RMY R+A  + + VE++     ++ G K   
Sbjct: 118 DPDDERDAIVEINPGAGGTESQDWAEMLLRMYMRWAEDQDYDVELVHQQPGEEAGIKSAT 177

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIR 223
             + GR  + R+K E+GVHR+ R+   +A  R HTS A+V V PE  +   VD+   +I 
Sbjct: 178 LNVQGRHAYGRLKSETGVHRLVRISPFDADSRRHTSFASVFVYPEVDDSIGVDLSEGEIE 237

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGI--------MVTSSEKSQHQNRLRAMKVLRA 275
           + T R+ G GGQHVN  ++ VR+    T             + E+SQHQNR RA ++L++
Sbjct: 238 LQTFRSGGKGGQHVNKVETGVRLIWTGTLSNGEETTVRAACTQERSQHQNRRRAREMLKS 297

Query: 276 RLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQG 334
           R+Y  ER+    E+      +  S +   +IR+Y       + DHR +      E VL+G
Sbjct: 298 RIYQAERELKEEEKERLESSK-KSIEWGSQIRSYVLHPYKMVNDHRTDTKRNDAEAVLEG 356

Query: 335 YIDDIINPLLTAHQAKM 351
            +D  I   L   +   
Sbjct: 357 ELDPFIKAYLLKGKKDR 373


>gi|77457286|ref|YP_346791.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf0-1]
 gi|77381289|gb|ABA72802.1| putative Peptide chain release factor 2 (RF-2) protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 280

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 100/277 (36%), Positives = 153/277 (55%), Gaps = 7/277 (2%)

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
            E  + A  +V+ + + + E  +++ +  +     D  +  L+I+AG+GG+EA  +   L
Sbjct: 4   EENDEGAVNDVVEVLQGLEESLSKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWANIL 63

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY R+A  R +   ++  S  +  G K     I G   F  ++ E GVHR+ R    +
Sbjct: 64  LRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFD 123

Query: 193 ASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +  R HTS + V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVRITH+PT
Sbjct: 124 SGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPT 183

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRT 308
             +V   +E+SQH N+  AMK+LRA+LY+ E ++     +   + K  IG G    +IR+
Sbjct: 184 NTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWG---HQIRS 240

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           Y     RI D R N+     + VL G ID+ +   L 
Sbjct: 241 YVLDASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 277


>gi|332707784|ref|ZP_08427811.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L]
 gi|332353487|gb|EGJ33000.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L]
          Length = 294

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 9/296 (3%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           ++ + +  ++     D+ + +         ++  R          L   T D K  +L I
Sbjct: 2   EDTKAILELLELETDDALLAEAQTNLTQLNKELDRW-----ELEQLLSGTYDAKGAVLTI 56

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
            AG GG++A  +   L RMY R+A    +KV +   S  D+ G K     I G   +  +
Sbjct: 57  NAGAGGTDAQDWADLLLRMYTRWAENHGYKVHLAELSPGDEAGIKSATLEIDGLRAYGYL 116

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQ 235
           K E G HR+ R+    A+G+  TS A V V+P      +++IP +D+ I T RA G GGQ
Sbjct: 117 KAEKGTHRLVRISPFNANGKRQTSFAGVEVMPAVDNTVELEIPEKDLEITTSRAGGKGGQ 176

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           +VN  ++AVRI HIPTG+ V  + E+SQ QN+ +A+ +L+A+L  +  ++ A E +  R 
Sbjct: 177 NVNKVETAVRIVHIPTGLAVRCTQERSQLQNKEKALVLLKAKLLVIAEEQRAQEIAEIRG 236

Query: 295 LQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
             +       +IR Y F   + + D R ++    +  VL G +D  I   L     
Sbjct: 237 DMVE-AAWGNQIRNYVFHPYQMVKDLRTSVETTAVNDVLDGNLDLFIEAYLRQENQ 291


>gi|119195451|ref|XP_001248329.1| peptide chain release factor 1, mitochondrial precursor (MRF-1)
           [Coccidioides immitis RS]
          Length = 438

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 115/370 (31%), Positives = 188/370 (50%), Gaps = 44/370 (11%)

Query: 21  LRMSESPSVDAYIKLTEEYA-------------------AISPIISKISIYDQKKQEEQD 61
            R+     ++    L  E+A                    ++  +  +  +D+  +   +
Sbjct: 37  ERLLSPALLNHARNLAREHATLSERLAGSFEKETAKRVGELTATVQALKEWDKAHESIAE 96

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L+ ++ D +SD E+R+LA  ++      +  L  ++   L+P+    +  C++EIR G G
Sbjct: 97  LNHLLDDPSSDPELRELASDDLQTTVSSLFALSGKLKESLIPRHPFAELPCLVEIRPGAG 156

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG-------YKEIVATISGRGVFS 174
           G EA LF  +L RMY  + +    +  +L     D  G         E V  I   G ++
Sbjct: 157 GDEAGLFASELLRMYLAFCSRHGLRTAILKKDVEDGAGGSGSEDRLSEAVMEIEAPGSYN 216

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA------------AEIDVDIPLEDI 222
            ++ E+GVHRVQR+PATEA GRVHTSA +V +LP                 D  I  +D+
Sbjct: 217 ILRTEAGVHRVQRIPATEAKGRVHTSAVSVMILPSFSEQNDSALNFDDPNSDYYINPQDV 276

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVE 281
           + + MRASG+GGQHVN T+SA+R+TH+PT  +V     +SQH+NR +A ++LR+++  + 
Sbjct: 277 QSEKMRASGAGGQHVNKTESAIRLTHVPTSTVVAVQDSRSQHENRRKAWRLLRSKIAQMR 336

Query: 282 RKRMANERSANRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YI 336
           R+    E    R+  +G      R +++RTYNF Q R TDHR  +T++ L  VL G   +
Sbjct: 337 REAREQELVELRRGIMGGVARMGRGDKVRTYNFGQNRCTDHRSGVTIHNLGSVLDGGEGL 396

Query: 337 DDIINPLLTA 346
           D+I+  +   
Sbjct: 397 DNIMESVSNW 406


>gi|194761148|ref|XP_001962794.1| GF14253 [Drosophila ananassae]
 gi|190616491|gb|EDV32015.1| GF14253 [Drosophila ananassae]
          Length = 392

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 117/324 (36%), Positives = 178/324 (54%), Gaps = 5/324 (1%)

Query: 38  EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEI 97
             A +  +++ +      ++       +      +     + +   +  +   ++ +  +
Sbjct: 58  RLAQLEGVVTALEQRRVLERNITSAQDM-ELEKDEDMRSLMQEENAIYTDLLSKQEQTLL 116

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
             LL   D +   + I  I AG GG EA LF  +L+ MY  Y   + W  E  +    D 
Sbjct: 117 RELLAMADDEVYPALIFGINAGAGGQEAMLFAQELYEMYTNYFEHKGWDYEEFAHETTDI 176

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           GG +     +SG   F+ ++ E+GVHRVQRVPATE SGR+HTS A++ V+P  A++ V I
Sbjct: 177 GGIRHASIMVSGEDAFTWLRHEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADVQVHI 236

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
             +D++I+T RASG+GGQHVNTTDSAVRI H+PTG+ V   SE+SQ +NR  AM  LR+R
Sbjct: 237 ADKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMSRLRSR 296

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQG- 334
           L   + +       A +K Q GS +R+E+IRTYNF Q RITDHR+   T++ L+  L+G 
Sbjct: 297 LVQRQLESAEASTKATKKAQQGSLNRNEKIRTYNFVQDRITDHRLQGGTMHNLDGFLKGG 356

Query: 335 -YIDDIINPLLTAHQAKMIGSASE 357
             +  +I  L   H+ + +    E
Sbjct: 357 EQLTSLIEKLQLEHRKERLKDLLE 380


>gi|33519726|ref|NP_878558.1| peptide chain release factor 2 [Candidatus Blochmannia floridanus]
 gi|33504071|emb|CAD83332.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia
           floridanus]
          Length = 365

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 107/307 (34%), Positives = 171/307 (55%), Gaps = 13/307 (4%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
             I   ++   +  Q+  DL  ++  ++S      L   E+      I  +  ++    +
Sbjct: 60  ENIGELVNYMVKDLQDLSDLIKIVVHNDS------LLINEIQEQLIHIDRILFQLEMCQM 113

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                DD +C ++I++G+GG+EA  +   L RMY ++   + + VE+++ S  D  G K 
Sbjct: 114 FSKKYDDCNCYVDIQSGSGGTEAQDWANMLLRMYLKWIDNKGFNVEIVTESCGDFSGIKS 173

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLED 221
               + G  V+  ++ ESG+HR+ R    +A+G+ HTS A+V V PE    ID+ I  ED
Sbjct: 174 TTIKVIGPYVYGWLRTESGIHRLVRKSPFDATGKRHTSFASVFVYPELDDNIDIQIRPED 233

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +RID  RASG+GGQHVN T+SAVRITHIPT I+    S++SQH+N+ +A+K L+A+LY+ 
Sbjct: 234 LRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQSDRSQHKNKNQAIKQLKAKLYNF 293

Query: 281 E--RKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDD 338
           E  +KR+  +   N+K  I  G+   +IR+Y     RI D R  L  + ++ VL G +DD
Sbjct: 294 ELHKKRIEKKIRENKKKDITWGN---QIRSYVLDHSRIKDLRTGLEKHNVKAVLNGDLDD 350

Query: 339 IINPLLT 345
            I   + 
Sbjct: 351 FIKTSIK 357


>gi|237800110|ref|ZP_04588571.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|257487126|ref|ZP_05641167.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|320323152|gb|EFW79241.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329576|gb|EFW85565.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330867549|gb|EGH02258.1| peptide chain release factor 2 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330872776|gb|EGH06925.1| peptide chain release factor 2 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330878328|gb|EGH12477.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330894559|gb|EGH27220.1| peptide chain release factor 2 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330959166|gb|EGH59426.1| peptide chain release factor 2 [Pseudomonas syringae pv. maculicola
           str. ES4326]
 gi|330964102|gb|EGH64362.1| peptide chain release factor 2 [Pseudomonas syringae pv. actinidiae
           str. M302091]
 gi|330985076|gb|EGH83179.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331009249|gb|EGH89305.1| peptide chain release factor 2 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331022966|gb|EGI03023.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 248

 Score =  183 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 98/249 (39%), Positives = 139/249 (55%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S  +  G K
Sbjct: 1   MFSGEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G   F  ++ E GVHR+ R    ++  R HTS + V V PE  +  ++DI   
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDT R+SG+GGQHVNTTDSAVRITH+PT  +V   +E+SQH N+  AMK+LRARLY+
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180

Query: 280 VERKRMAN--ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            E ++     +   + K  IG G    +IR+Y     RI D R N+     + VL G ID
Sbjct: 181 QEVQKRNAASQALEDTKSDIGWG---HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDID 237

Query: 338 DIINPLLTA 346
           + +   L  
Sbjct: 238 EYLIASLKQ 246


>gi|145485050|ref|XP_001428534.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395620|emb|CAK61136.1| unnamed protein product [Paramecium tetraurelia]
          Length = 390

 Score =  183 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 193/360 (53%), Gaps = 8/360 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           ++L ++++ +L   +   + +  +   ++   +       + P I             +D
Sbjct: 27  LYLINQRLGELNTEYETYQDQTIK-GDMNEIKR--RRMNELQPKIHIYKQIQASVSVIED 83

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +IG   S  EI  L +     IE   +  ++ ++ L+   + D  +   +E+RAG G
Sbjct: 84  AKQLIGMGGSSDEISMLNEEIQSQIEYLKKYQDDALSQLIEEDEYDHIRQLNVEVRAGVG 143

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD--GGYKEIVATISGRGVFSRMKFE 179
           GSE +LF  D+  M + YA+L+ W   V+S   ++    G K  +  I+G  V+  +K E
Sbjct: 144 GSEGSLFAEDIIGMIQNYASLQNWDCRVISIQKDNQIGKGCKTGILQINGENVYQHLKCE 203

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           SGVH+V RVP TEA GR+H+S A++ VLP+  +    +  +D+R + MRASG GGQHVN 
Sbjct: 204 SGVHKVIRVPETEAKGRLHSSTASMIVLPKVTD-SFHLSDKDLRYEYMRASGPGGQHVNK 262

Query: 240 TDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SA RITH+PTG  +V   ++SQ +N+ RA ++LR +L+ +  +      +  RK Q+ 
Sbjct: 263 TESACRITHVPTGIQVVNMEDRSQERNKQRAYQILRDKLFAIHVQEKQERMAQTRKSQVT 322

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
             DRS++IRTYNF Q RITDHR NLTLY +E +L G  + + I           +    +
Sbjct: 323 GSDRSDKIRTYNFPQERITDHRTNLTLYGMEKMLSGELLGEFIQKYQEKIHNAKLQDLLD 382


>gi|71083436|ref|YP_266155.1| peptide chain release factor 2 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062549|gb|AAZ21552.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 284

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 99/288 (34%), Positives = 158/288 (54%), Gaps = 13/288 (4%)

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           ++ +  +  + S I ++ +      +   +             +  D   C +EI AG G
Sbjct: 1   MNELALEEKNQSVINEVLESIKNLKKLAKK-----NETKCFLSNETDSLDCYIEIHAGAG 55

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G+E+  +   L RMY +++ ++ +K E++S    ++ G K     I G  VF  +K ESG
Sbjct: 56  GTESQDWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESG 115

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           +HR+ R+   ++  R HTS A++ + P     I+++I  +D+RIDT R+SG+GGQHVNTT
Sbjct: 116 IHRLVRISPFDSGARRHTSFASIWIYPVVDENIEIEINEKDLRIDTYRSSGAGGQHVNTT 175

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQI 297
           DSAVRITH+P+ I+V   +E+SQH+N+   M +L+ARLYD E K+   E     + K +I
Sbjct: 176 DSAVRITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEI 235

Query: 298 GSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           G G    +IR+Y     R + D+R N      + VL G IDD +   L
Sbjct: 236 GWG---HQIRSYVLHPYRMVKDNRTNFESSNPDKVLDGEIDDFLESSL 280


>gi|327306561|ref|XP_003237972.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892]
 gi|326460970|gb|EGD86423.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892]
          Length = 438

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 114/371 (30%), Positives = 194/371 (52%), Gaps = 30/371 (8%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L    A +  + +ES          +    I+P+ + +  +D   +   +L  +I + +
Sbjct: 53  ALAAEHATLTAQQAESFE----RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPS 108

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D+E++ LA+ ++      +  L   +   L+P+    D  C++EIR G GG EA LF  
Sbjct: 109 TDTELKSLAEDDITTTIGTLSSLSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAA 168

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHR 184
           ++ RMY  + + R  +  ++     D  G        E+V  +   G ++ ++ E+GVHR
Sbjct: 169 EMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHR 228

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDI--------------PLEDIRIDTMRAS 230
           VQRVPATEA GR HTSA +V +LP   E + +                 +D++ +  RAS
Sbjct: 229 VQRVPATEAKGRTHTSAVSVMILPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRAS 288

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQHVN T+SAVR+THIPTG +++    +SQH+NR +A  +LRA+L    R+    E 
Sbjct: 289 GAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEM 348

Query: 290 SANRKLQIGSGD---RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLL 344
              R+  +G  +   R ++IRTYNF+Q R TDHR  +T++ +  V+ G   ++ I+  + 
Sbjct: 349 MELRRGAMGGVNKTGRGDKIRTYNFTQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQ 408

Query: 345 TAHQAKMIGSA 355
           +    + + + 
Sbjct: 409 SWLVDQEVEAL 419


>gi|303287338|ref|XP_003062958.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455594|gb|EEH52897.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 294

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 136/289 (47%), Positives = 193/289 (66%), Gaps = 5/289 (1%)

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           SD E+  +A  E  A+   +  LE ++ +LLLP D  DD   ILEIRAG GG EAA F  
Sbjct: 5   SDDELASMASEEHDALASTVPALEEKLAHLLLPSDDADDGGAILEIRAGAGGDEAARFAA 64

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           +L RMY+ +A  R W  E ++++  D+GGYK++   +SG  V+  +K+ESGVHR  R   
Sbjct: 65  NLARMYDMFARRRGWTFERMTATTTDEGGYKDVTFNVSGDDVYGTLKYESGVHRRVRRVQ 124

Query: 191 TEAS--GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             +   G+VHTS A+VAV+P A E+++D+  ED+RIDTMRASG+GGQHVNTT+SAVR+TH
Sbjct: 125 RVSGDEGKVHTSTASVAVMPHAEEVELDLRDEDVRIDTMRASGAGGQHVNTTNSAVRLTH 184

Query: 249 IPT-GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +P+  ++V   E+SQH+N+ +A K+LRAR+Y+  R     ER+  RK  IGSGDRSER+R
Sbjct: 185 VPSGTVVVMMDERSQHKNKEKAFKILRARIYEGLRAEAHRERADQRKSLIGSGDRSERVR 244

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           TYN+  GR+ DHR+N  +  LE +L G   + DI++ L T  + + +  
Sbjct: 245 TYNYKDGRVKDHRVNAQVNDLEGLLNGGDALSDIVDALRTEEKRRALLE 293


>gi|222624780|gb|EEE58912.1| hypothetical protein OsJ_10554 [Oryza sativa Japonica Group]
          Length = 356

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 151/343 (44%), Gaps = 51/343 (14%)

Query: 12  LKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  R  ++ + +      D  +   K++ E+  +   I  ++ ++Q+  E  D+  +  +
Sbjct: 49  ILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDMLRLARE 108

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + +                                        +  ++AG GG+E+  +
Sbjct: 109 EDDNE---------------------------------------LETVQAGAGGTESMDW 129

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              +  MY  +A  R + V ++     +  G K     + G   F   K E GVHR+ R+
Sbjct: 130 AAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 189

Query: 189 PATEASGRVHTSAATVAVLPE--AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
              ++  R HTS A VAV+P          I   D+RI+  R+ G GGQH N T+SAVRI
Sbjct: 190 SPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRI 249

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
            HIPTGI     +E+SQH N+  AM VL++RL  +E  R A   + + +   +I  G+  
Sbjct: 250 VHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGN-- 307

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            +IR+Y     R + D R N  +   + VL G +DD I   L+
Sbjct: 308 -QIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 349


>gi|302496498|ref|XP_003010250.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371]
 gi|291173792|gb|EFE29610.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371]
          Length = 438

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 114/371 (30%), Positives = 194/371 (52%), Gaps = 30/371 (8%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L    A +  + +ES          +    I+P+ + +  +D   +   +L  +I + +
Sbjct: 53  ALAAEHATLTAKQAESFE----RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPS 108

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D+E++ LA+ ++      +  L   +   L+P+    D  C++EIR G GG EA LF  
Sbjct: 109 TDTELKSLAEDDITTTIGTLSSLSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAA 168

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHR 184
           ++ RMY  + + R  +  ++     D  G        E+V  +   G ++ ++ E+GVHR
Sbjct: 169 EMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHR 228

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDI--------------PLEDIRIDTMRAS 230
           VQRVPATEA GR HTSA +V +LP   E + +                 +D++ +  RAS
Sbjct: 229 VQRVPATEAKGRTHTSAVSVMILPSFPESNQEDSPLNFDDPNSDYYVNPQDVQSEKFRAS 288

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQHVN T+SAVR+THIPTG +++    +SQH+NR +A  +LRA+L    R+    E 
Sbjct: 289 GAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEM 348

Query: 290 SANRKLQIGSGD---RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLL 344
              R+  +G  +   R ++IRTYNF+Q R TDHR  +T++ +  V+ G   ++ I+  + 
Sbjct: 349 MELRRGAMGGVNKTGRGDKIRTYNFTQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQ 408

Query: 345 TAHQAKMIGSA 355
           +    + + + 
Sbjct: 409 SWLVDQEVEAL 419


>gi|317033212|ref|XP_001395081.2| peptide chain release factor 1 [Aspergillus niger CBS 513.88]
          Length = 429

 Score =  182 bits (461), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 120/370 (32%), Positives = 196/370 (52%), Gaps = 28/370 (7%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L +  + +   ++E        KL +    ++PI S +  ++       +L +++ D  
Sbjct: 49  SLTSEHSTLSAHLAEVFD----AKLAKRVGELAPIASTLKEWEHANSSISELLSLLDDPE 104

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D+E+R LA  ++ + +  +  + + +   L+P+    D  C+LEIR G GG EA LF  
Sbjct: 105 TDAELRSLAVEDLESSKIALPAIADNLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAF 164

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG---YKEIVATISGRGVFSRMKFESGVHRVQR 187
           ++ RMY  + + R ++  ++     D        E V  +   G +  ++ ESGVHRVQR
Sbjct: 165 EVLRMYIAFCSRRGFRYSIIKQDVADGPAQDRLSEAVLEVDADGAYDILRTESGVHRVQR 224

Query: 188 VPATEASGRVHTSAATVAVLPEAA---------------EIDVDIPLEDIRIDTMRASGS 232
           VPATEA GR HTSA +V +LP                    D  +  +++R + MRA G+
Sbjct: 225 VPATEAKGRTHTSAVSVMILPSFPDSGSGLDSSLNFEDPNSDYYVDPQEVRTEKMRAGGA 284

Query: 233 GGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T+SA+R+THIPTG +V+    +SQH NR +A +VLRARL +  R+    E   
Sbjct: 285 GGQHVNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLRARLAEARREAREQELVN 344

Query: 292 NRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTA 346
            R+  +G      R ++IRTYN+ Q R TDHR  LT++ L+ VL G   ++ +++ + T 
Sbjct: 345 LRRGAMGGVARMGRGDKIRTYNYGQNRCTDHRSGLTIHNLDSVLDGGEGLETVMDSVRTW 404

Query: 347 HQAKMIGSAS 356
              + I + +
Sbjct: 405 LVEREIEAMA 414


>gi|216335|dbj|BAA01123.1| ORF3 [Bacillus subtilis]
          Length = 299

 Score =  182 bits (461), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 104/303 (34%), Positives = 156/303 (51%), Gaps = 10/303 (3%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M++    +   K        + +   ++ Y +  +  ++L         + +     ++E
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
                      E E+  L    +  D  + ILE+  G GG+E+  +   L RMY R+   
Sbjct: 61  KELKSLTKEFNEFELQLL--LSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGER 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           R +KVE L     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HTS  
Sbjct: 119 RGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+PE  +  D+DI  EDI++DT RASG+GGQHVNTTDSAVRITH+PT ++V   +E+
Sbjct: 179 SCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RIT 317
           SQ +NR RAMK+L+A+LY    +    E    R  Q  IG G    +IR+Y F     + 
Sbjct: 239 SQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWG---SQIRSYVFHPYSMVK 295

Query: 318 DHR 320
           DHR
Sbjct: 296 DHR 298


>gi|213969083|ref|ZP_03397222.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           syringae pv. tomato T1]
 gi|213926081|gb|EEB59637.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           syringae pv. tomato T1]
          Length = 280

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 104/285 (36%), Positives = 150/285 (52%), Gaps = 11/285 (3%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D    D    EV  +   + +LE    +  +     D  +  L+I+AG+GG+EA
Sbjct: 1   MSAEEEDQAAVDDVAAEVERLRASLEKLE----FRRMFSGEMDPNNAYLDIQAGSGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  R +   ++  S  +  G K     I G   F  ++ E GVHR+
Sbjct: 57  QDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    ++  R HTS + V V PE  +  ++DI   D+RIDT R+SG+GGQHVNTTDSAV
Sbjct: 117 VRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNTTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGD 301
           RITH+PT  +V   +E+SQH N+  AMK+LRARLY+ E ++     +   + K  IG G 
Sbjct: 177 RITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWG- 235

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y     RI D R N+     + VL G ID+ +   L  
Sbjct: 236 --HQIRSYVLDASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 278


>gi|116620705|ref|YP_822861.1| peptide chain release factor 2 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223867|gb|ABJ82576.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 322

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 166/323 (51%), Gaps = 15/323 (4%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
            ++   +   ++          +   +  +  +           Q ++    K   EL  
Sbjct: 1   MQDRKRLEEAVANDDQIRALTDDLDTMFELAREGE-------PVQADIERDLKPYSELLE 53

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
            +   +L    +D +S I+ I  G GG+E+  +   L RMY R+A   K+   +    + 
Sbjct: 54  RLETAMLLSGENDARSAIVTIHPGAGGTESQDWAEMLLRMYLRWAEREKFATVITDRLEG 113

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEID 214
           +  G K +   ++G   +  ++ E GVHR+ R+   +A+ R HTS A+V V P+   EI 
Sbjct: 114 EGAGIKSVTFEVNGENAYGLLQSEIGVHRLVRISPFDANARRHTSFASVFVFPQVDDEIK 173

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +DI  +D+RIDT RASG+GGQHVN TDSAVRITH PTGI+V   +E+SQH+NR  AMK L
Sbjct: 174 IDIQDKDLRIDTFRASGAGGQHVNMTDSAVRITHFPTGIVVQCQNERSQHKNRATAMKQL 233

Query: 274 RARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           RA LY+ E ++   E   + + KL+I   +   +IR Y  +  R + D R  L L  ++ 
Sbjct: 234 RACLYEHELEKKRAETRETEDSKLEI---NFGSQIRNYVLAPYRLVKDLRSKLALGDVDR 290

Query: 331 VLQGYIDDIINPLLTAHQAKMIG 353
           VL+G +D +I+  L   +   I 
Sbjct: 291 VLEGGLDPLIHSYLVWRKTGKIA 313


>gi|46117472|ref|XP_384754.1| hypothetical protein FG04578.1 [Gibberella zeae PH-1]
          Length = 445

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 111/370 (30%), Positives = 189/370 (51%), Gaps = 37/370 (10%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   L      ++  ++ S       ++      +S +   +   ++ +   ++L  ++
Sbjct: 58  QRAQSLTTEHDALQKNLNSSFDSTTAKRVG----ELSRVAEALKALEKSQTSVKELKQML 113

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D + D ++  +A+ E+ +   ++  L  +++  L P+    D  C+LE R G GG E  
Sbjct: 114 DDASLDQDLAAIARDELSSETGQLEALARKLSASLTPRHPFADFPCMLEFRPGPGGLEGR 173

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG----------YKEIVATISGRGVFSRM 176
            F+  LF+MY+     R ++  V+     D  G           +E +  +  +G F   
Sbjct: 174 FFMDTLFKMYKGLCMRRGYRHTVVKYEFADGAGDSSSSAGENPLQEAILEVHDQGAFDIF 233

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI------------DVDIPLEDIRI 224
           + E+G+HRVQR+P+TE  GRVHTSA  V VLP   E             D  +  ++++I
Sbjct: 234 RGEAGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENSATSIDFEDPESDFYVNPQELKI 293

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERK 283
           +TMRA G+GGQHVN T+SA+R+TH+PTG  V+    +SQ +NR  A K++R+R+ D  R+
Sbjct: 294 ETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAWKLMRSRIADQRRE 353

Query: 284 RMANERSANR-----KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YI 336
           +   E S  R     K QI    R ++IRTYN++Q R TDHR  + ++ L  VL+G   +
Sbjct: 354 QREQEASQLRNSVLSKTQI---TRGDKIRTYNYNQDRCTDHRAGIDVHGLPNVLEGGEKL 410

Query: 337 DDIINPLLTA 346
           D I++     
Sbjct: 411 DKIMDGAKDW 420


>gi|257452270|ref|ZP_05617569.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|257465930|ref|ZP_05630241.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917086|ref|ZP_07913326.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317058813|ref|ZP_07923298.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|313684489|gb|EFS21324.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|313690961|gb|EFS27796.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 326

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 108/331 (32%), Positives = 172/331 (51%), Gaps = 11/331 (3%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84
           E    +     +     ++   + ++ +    +E ++   +I    +  E+  +   E  
Sbjct: 2   EEGFWNDKRSSSAVIKTMNEEKALLASFQSLVEEMEEEEVLIEFVEAGDEMSQIELEEKH 61

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRK 144
               +        +  LL     D  + I+ I +G GG+EA  +   L+RMY R+   +K
Sbjct: 62  KQLLKDM---ESFSTSLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCNDKK 118

Query: 145 WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATV 204
           +KVE +     D  G K I   +SG   +  +K E G+HR+ R+   +A+ + HTS A+V
Sbjct: 119 YKVEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSFASV 178

Query: 205 AVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
            V+PE  E  +V+I   DIRIDT RASG+GGQHVN TDSAVRITH PTGI+V    E+SQ
Sbjct: 179 EVVPEVDESVEVEIEASDIRIDTYRASGAGGQHVNMTDSAVRITHFPTGIVVTCQKERSQ 238

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
             NR  AMK+L+++L ++E K+   E       + +IG G    +IR+Y F     + DH
Sbjct: 239 LSNRETAMKMLKSKLLEIELKKKEEEMKKIQGEQSEIGWG---SQIRSYVFQPYTMVKDH 295

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           R  + +  ++ V+ G +DD +N  L  ++ K
Sbjct: 296 RTGVEIGNIKAVMDGDLDDFMNGYLRWNKKK 326


>gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1]
 gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1]
 gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
          Length = 337

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 9/327 (2%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M+     +      +    +  +   +S  ++ +   +DL  +    + D  I D  + E
Sbjct: 1   MAAPDFWNDSESAQKVVMQLKGLKGIVSPLNELESSAEDLEALFEMADEDESIVDEVRSE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +  +E  + +LE       L    +D    I+ I A  GG++A  +   L RMY  +A  
Sbjct: 61  IDRLEVVLDDLEL----KALLNGPNDSAGAIVTINARDGGTDANDWADMLLRMYSAWAVG 116

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           +++K+E+L   +N++ G       + G   +  +K E G+HR+ R+    +  +  TS A
Sbjct: 117 QEYKIELLDRQENEEAGINHASIAVRGPMAYGYLKGEEGMHRLVRISPFNSESKRQTSFA 176

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
            V+V PE  +  +V++  +D+R DT RASG+GGQHVN TDSA+R+THIPT  +V   +++
Sbjct: 177 AVSVSPEIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQR 236

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDH 319
           SQHQNR  A K+LRA+L  +E +R   E +   + Q  +G    +IR Y      R+ D 
Sbjct: 237 SQHQNRDTAWKMLRAKLARIEEERREAEEAKKYETQARTG-FGSQIRNYFLHPDQRVKDA 295

Query: 320 RINLTLYKLEYVLQG-YIDDIINPLLT 345
           R    +     VL G  +    +  L 
Sbjct: 296 RTGHYVGNFNSVLDGSELQGFFDAFLR 322


>gi|163788169|ref|ZP_02182615.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
           ALC-1]
 gi|159876489|gb|EDP70547.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
           ALC-1]
          Length = 315

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 92/313 (29%), Positives = 158/313 (50%), Gaps = 12/313 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
             +I    S ++ Y+  +   +DL  +   +  D    +  +         I +LE    
Sbjct: 1   MKSIREKKSWVNDYNAAQTLYEDLEVIYEFYKEDEAPMENVENRFEKAVNAIEKLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  +  D  S +L+I AG GG+E+  +   L RMY  YA    +KV+ L+  + D  
Sbjct: 57  FKNMLSEEGDSLSAVLQITAGAGGTESCDWASMLMRMYLMYAEKSGFKVKELNHQEGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I+++I
Sbjct: 117 GIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              DI I T R+SG+GGQ+VN  ++ V++ H P+GI +  S  +SQH NR RAM++L+++
Sbjct: 177 NPADIEITTARSSGAGGQNVNKVETKVQLHHKPSGIQIQCSETRSQHDNRTRAMQMLKSQ 236

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQ 333
           LY++E ++   +R      K++I  G    +IR Y     + + D R       ++ V+ 
Sbjct: 237 LYEIELQKQMAQRDDIEAGKMKIEWG---SQIRNYVMHPYKLVKDVRSAHETGNVDAVMD 293

Query: 334 GYIDDIINPLLTA 346
           G I+  +   L  
Sbjct: 294 GDIEPFLKAYLMM 306


>gi|321264047|ref|XP_003196741.1| peptide chain release factor 1, mitochondrial precursor
           [Cryptococcus gattii WM276]
 gi|317463218|gb|ADV24954.1| Peptide chain release factor 1, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 476

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 119/362 (32%), Positives = 189/362 (52%), Gaps = 17/362 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           ++  +  E E + ++        +       ++P++   + Y + KQ   D+   + D +
Sbjct: 110 NVYKKVMENEAKATDIDVKGQIERA-RVQKELAPLLEVWNRYLELKQSIIDMKPFLED-S 167

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +              +    + +    +LLP  +      ++ + AG GG E+AL   
Sbjct: 168 DPTLREMFETEHASLCTELDTLIISTFPTVLLPPSSTASLPAVMSLNAGVGGLESALCTE 227

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----------VFSRMKFE 179
           DL RMY R+A  R WKVE +S  +   G     +  ++ +            V+  +++E
Sbjct: 228 DLARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKFEPPQYAEEGTEVYGALQWE 287

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAE--IDVDIPLEDIRIDTMRASGSGGQHV 237
            GVHR+QRVPA E  GR+HTS   V VLP   +      +  +D+RID MRA G+GGQHV
Sbjct: 288 KGVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHV 347

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N T+SAVR+THIPTGI V+    +SQHQNR  A ++LRARL + +       R A+R+ Q
Sbjct: 348 NRTESAVRLTHIPTGITVSMQDSRSQHQNRAWAWEILRARLSEKKHNEEVEARRASRRDQ 407

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           +   DRS++IRTYNF+Q R+TDHR  +T+  L+ VL G  ++D+I+ +      + + + 
Sbjct: 408 VKGADRSDKIRTYNFNQDRLTDHRFGITVTGLQRVLDGEGLEDVISMMKKDVDERRLEAL 467

Query: 356 SE 357
            E
Sbjct: 468 LE 469


>gi|119486315|ref|ZP_01620374.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
 gi|119456528|gb|EAW37658.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
          Length = 308

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 9/307 (2%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
           + +   + +  ++   +  ++   + +S + +             R          L   
Sbjct: 1   MQQYQQWQKTIEDTDAIVELLELESDESLLAEAESNLTRLNHDLDRW-----ELQQLLSA 55

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D    +L I AG GG++A  +   L RMY R+     +KV +   S+ D+ G K +  
Sbjct: 56  PYDKNGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAHGYKVYLAELSEGDEAGIKSVTL 115

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRI 224
            I GR  +  +K E G HR+ R+    A+G+  TS A V ++P   + + ++IP +D+ +
Sbjct: 116 EIEGRYAYGYLKCEKGTHRLVRISPFNANGKRQTSFAGVEIMPMIDQGVHLEIPEKDLEV 175

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
            T RA G GGQ+VN  ++AVRI H+PTGI V  + E+SQ QN+ +A+ +L+A+L  + ++
Sbjct: 176 TTSRAGGKGGQNVNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQE 235

Query: 284 RMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
           + A E +  R   +       +IR Y F   + + D R +     ++ V+ G +D  I  
Sbjct: 236 QRAQEIAEIRGDLVE-AAWGNQIRNYVFHPYQMVKDLRTSEETTAIDDVMNGELDRFIQA 294

Query: 343 LLTAHQA 349
            L     
Sbjct: 295 YLRQENQ 301


>gi|47218558|emb|CAG10257.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 438

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 117/373 (31%), Positives = 196/373 (52%), Gaps = 24/373 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K +  L      +  ++  +   ++  K L   +A + P+ + +    +  ++ +++ +
Sbjct: 65  QKYLQQLMEECRNVSQKLQHAHLSESERKGLLRRHAELLPVATALDSVRRASRDREEVVS 124

Query: 65  VIGDH---NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG-- 119
           ++      + D       + E   I +++  L  ++   LLP D  D  + +LE+ +G  
Sbjct: 125 LLQSSSGVDEDKLFTQQLEEEEGHISQKLLSLRRDLVKALLPADPLDSSNVLLEVVSGRT 184

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND------------DGGYKEIVATI 167
           TGG     F  ++F MY+ +A+ + W  E ++ ++ +             GG     A I
Sbjct: 185 TGGDICQQFTREVFDMYQGFASHKNWDFEPVNYTNAEYGCDVRGCCLLLSGGLHHAAARI 244

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRI 224
           +G  V+  +K E G HRVQR+P    S R+   HT   TV +LP+ AE+D+ +  +D+RI
Sbjct: 245 TGENVYRHLKHEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIILPQPAELDLHVDPKDLRI 304

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT R+ G+GGQ VNTTDSAVR+ H+PTGI V     +SQ QNR  AM+ LRARLY     
Sbjct: 305 DTFRSRGAGGQSVNTTDSAVRVVHLPTGIAVECQQSRSQLQNRDTAMRALRARLYQARLG 364

Query: 284 RMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIIN 341
           + +  R + R+ Q+G+  +SERIRTYNFSQ R+TDHR   T   ++  ++G   + D+I 
Sbjct: 365 KESQRRLSARRQQVGTRSQSERIRTYNFSQDRVTDHRTGYTARDIKEFMRGGQALQDLIG 424

Query: 342 PLLTAHQAKMIGS 354
            +L   + + +  
Sbjct: 425 DVLEHAEVEALLE 437


>gi|254304309|ref|ZP_04971667.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324501|gb|EDK89751.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 308

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 113/306 (36%), Positives = 162/306 (52%), Gaps = 11/306 (3%)

Query: 46  ISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
            + +S Y++   E  D   +I    S     +    E   I K       E    LL   
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFVESGETSFENELSEKHKILKSD---IEEFEINLLLDG 61

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             D  + I+ I +G GG+EA  +   L+RMY R+  L+ +KV  L   + D  G K +  
Sbjct: 62  EYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKAYKVSELDFMEGDSVGVKSVTF 121

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRI 224
            + G   +  +K E GVHR+ R+   +A+ + HTS A+V V+PE  E  +V+I   DIRI
Sbjct: 122 LVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRI 181

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           DT RASG+GGQHVN TDSAVRITH P+GI+V    E+SQ  NR  AMK+L+++L ++E K
Sbjct: 182 DTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELK 241

Query: 284 RMANERSAN--RKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDII 340
           +   E       +  IG G+   +IR+Y F     + DHR N  +  ++ V+ G IDD I
Sbjct: 242 KKEEEMKKIQGEQSDIGWGN---QIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFI 298

Query: 341 NPLLTA 346
           N  L  
Sbjct: 299 NSYLRW 304


>gi|213026460|ref|ZP_03340907.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 201

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 117/201 (58%), Positives = 156/201 (77%), Gaps = 2/201 (0%)

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HRVQRVPATE+ GR+HTS
Sbjct: 1   EARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 60

Query: 201 AATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
           A TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA+RITH+PTGI+V    
Sbjct: 61  ACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 120

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITD 318
           E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDRS+R RTYNF QGR+TD
Sbjct: 121 ERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTD 180

Query: 319 HRINLTLYKLEYVLQGYIDDI 339
           HRINLTLY+L+  ++G +D +
Sbjct: 181 HRINLTLYRLDETMEGKLDML 201


>gi|91762141|ref|ZP_01264106.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717943|gb|EAS84593.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 284

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 98/288 (34%), Positives = 159/288 (55%), Gaps = 13/288 (4%)

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           ++ +  +  + S I ++ +      +   +             +  D  +C +EI AG G
Sbjct: 1   MNELALEEKNQSVINEVLESIKNLKKLAKK-----NETKCFLSNETDSLNCYIEIHAGAG 55

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G+E+  +   L RMY +++ ++ +K E++S    ++ G K     I G  VF  +K ESG
Sbjct: 56  GTESQDWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESG 115

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           +HR+ R+   ++  R HTS A++ + P     I+++I  +D+RIDT R+SG+GGQHVNTT
Sbjct: 116 IHRLVRISPFDSGARRHTSFASIWIYPVIDENIEIEINEKDLRIDTYRSSGAGGQHVNTT 175

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQI 297
           DSAVRITH+P+ I+V   +E+SQH+N+   M +L+ARLYD E K+   E     + K +I
Sbjct: 176 DSAVRITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEI 235

Query: 298 GSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           G G    +IR+Y     R + D+R N      + +L G IDD +   L
Sbjct: 236 GWG---HQIRSYVLHPYRMVKDNRTNFESSNPDKILDGEIDDFLESSL 280


>gi|119511140|ref|ZP_01630258.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
 gi|119464235|gb|EAW45154.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
          Length = 288

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 4/256 (1%)

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
           ++     L     D +  +L I AG GG++A  +   L RMY R+A    +KV +   S+
Sbjct: 25  DQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEDHGYKVSLAEESE 84

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            D+ G K     I+GR  +  ++ E+G HR+ R+    A+G+  TS A V ++P+     
Sbjct: 85  GDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNANGKRQTSFAGVEIMPQLDHSV 144

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
            ++IP +D+ I T RA G GGQ+VN  ++AVRI H+PTGI V  + E+SQ QN+ +A+  
Sbjct: 145 QLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGIAVRCTEERSQLQNKDKALAR 204

Query: 273 LRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYV 331
           L+A+L  + R++ A E +  R   +       +IR Y F   + + D R N+    +  V
Sbjct: 205 LKAKLLVIAREQKAQEVAEIRGDMVE-ASWGNQIRNYVFHPYQMVKDLRTNVETTAISDV 263

Query: 332 LQGYIDDIINPLLTAH 347
           + G +D  I   L   
Sbjct: 264 MDGDLDSFIQAYLRQE 279


>gi|329889563|ref|ZP_08267906.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568]
 gi|328844864|gb|EGF94428.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568]
          Length = 300

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 100/300 (33%), Positives = 155/300 (51%), Gaps = 13/300 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           +Q  ++   L  +  +   ++ + D          K I+E         L     D    
Sbjct: 2   EQGLEDGIMLADMADEEGDEATLEDAR-----EQLKAIKERAARAELEALLSGEADGNDA 56

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            LEI +G GG+E+  + G L RMY R+A    ++V + +    +  G K     I+G   
Sbjct: 57  YLEINSGAGGTESNDWAGMLMRMYSRWARAHGYEVTIEAEEQGEQAGIKSATLQIAGPNA 116

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASG 231
           +  +K ESGVHR+ R+   +A+ + HTS A++ V P     I++DI   D+R DT RASG
Sbjct: 117 YGWLKSESGVHRLVRISPYDAAAKRHTSFASIGVSPVVDDTIEIDINPADVRTDTYRASG 176

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA--NE 288
           +GGQH+N TDSAVR+TH+PT  +V   + +SQHQNR +A K+LRARLY++E ++     +
Sbjct: 177 AGGQHINKTDSAVRLTHVPTNTVVACQAGRSQHQNREQAWKMLRARLYELELQKREAAAQ 236

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             A+ K  IG G    +IR+Y     + + D R  +     + VL G +D  +   L A 
Sbjct: 237 ALADAKTDIGWG---HQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDPFMGAALAAR 293


>gi|124024969|ref|YP_001014085.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           NATL1A]
 gi|123960037|gb|ABM74820.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
           NATL1A]
          Length = 313

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 6/315 (1%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  + +++      +   +D +  +  +  D +   L++      + +     +   
Sbjct: 1   MRQLDEVKAQLEKLITWRGAIEDANLSLELYELDLDEEILSEAHNGLEKLKQEL--DRWE 58

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              L     D +  +L I AG GG++A  +   L RMY R+A     KV +   S+ ++ 
Sbjct: 59  TERLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWADNNGMKVIINELSEGEEA 118

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDI 217
           G K +   I G   +  ++ E G HR+ R+    A+G+  TS A V V+P+   E++++I
Sbjct: 119 GIKSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEI 178

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
           P +D+ I T R+ G+GGQ+VN  ++AVRI H+PTGI V  + E+SQ QN+ +AM +L+++
Sbjct: 179 PEKDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSK 238

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           L  +  ++ A E +  R   I       +IR Y F   + + D R       ++ V+ G 
Sbjct: 239 LMVIALEQRAAEIADIR-GDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGE 297

Query: 336 IDDIINPLLTAHQAK 350
           ID  I  LL  +  +
Sbjct: 298 IDIFIQSLLRQNIEE 312


>gi|226493092|ref|NP_001141218.1| hypothetical protein LOC100273305 [Zea mays]
 gi|194703328|gb|ACF85748.1| unknown [Zea mays]
          Length = 407

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 112/370 (30%), Positives = 188/370 (50%), Gaps = 37/370 (10%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   L +   +++  ++ S        + +    +S +   +  +   +    +L +++
Sbjct: 22  QRAQSLTSEHDDLQKTLNNSFD----SSIAKRVGELSRVAEALKAWQTSQASVAELTSML 77

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D + D+++  +A+ E+ +   ++  L   ++  L P+    D  C+LE R G GG E  
Sbjct: 78  DDPDQDADLAAIARDELSSETGKLESLARRLSASLTPRHPFADFPCMLEFRPGPGGLEGR 137

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG----------YKEIVATISGRGVFSRM 176
            F+  LF+MY+     R ++  V+     D  G           +E +  +   G F   
Sbjct: 138 YFMDTLFKMYKALCMRRGYRHTVVKYEFADTAGDSSSSAGENPLQEAILEVHDPGAFDIF 197

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI------------DVDIPLEDIRI 224
           + E+G+HRVQR+P+TE  GRVHTSA  V VLP   E             D  +  ++++I
Sbjct: 198 RSEAGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENGAANIDFDDPESDFYVNPQEVKI 257

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERK 283
           +TMRA G+GGQHVN T+SA+R+TH+PTG  V+    +SQ +NR  A K+LR+R+ D  R+
Sbjct: 258 ETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAWKLLRSRIADQRRE 317

Query: 284 RMANERSANR-----KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YI 336
               E S  R     K QI    R ++IRTYN++Q R TDHR  + ++ L  VL+G   +
Sbjct: 318 AREEEASNLRNSVLSKTQI---TRGDKIRTYNYNQDRCTDHRAGVDVHDLPNVLEGGEKL 374

Query: 337 DDIINPLLTA 346
           D I++     
Sbjct: 375 DRIMDGAKDW 384


>gi|282898121|ref|ZP_06306116.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
 gi|281197265|gb|EFA72166.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
          Length = 290

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 12/292 (4%)

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +  D     E           +        ++     L     D +  +L I AG 
Sbjct: 2   ELLELEADEGLLQEAETTINQMHRDL--------DQWELQQLLSGPYDSQGAVLTINAGA 53

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG++A  +   L RMY R+A    +KV +   S+ D+ G K     I+GR  +  ++ E 
Sbjct: 54  GGTDAQDWAFMLMRMYTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEM 113

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQHVNT 239
           G HR+ R+    A+G+  TS A V V+P+       +IP +D+ + T RA G GGQ+VN 
Sbjct: 114 GTHRLVRISPFNANGKRQTSFAGVEVMPQIDNSVTLEIPEKDLEVTTSRAGGKGGQNVNK 173

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
            ++AVRI HIPTGI V  + E+SQ QN+ +A+  L+A+L  + R++ A E +  R   + 
Sbjct: 174 VETAVRIVHIPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVE 233

Query: 299 SGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
                 +IR Y F   + + D R NL    +  V+ G +D+ I   L     
Sbjct: 234 -ASWGNQIRNYVFHPYQIVKDLRTNLETTAIIDVMNGDLDNFIQAYLRQENQ 284


>gi|195435374|ref|XP_002065668.1| GK14545 [Drosophila willistoni]
 gi|194161753|gb|EDW76654.1| GK14545 [Drosophila willistoni]
          Length = 397

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 120/353 (33%), Positives = 194/353 (54%), Gaps = 11/353 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+  +  +  R++ + +  +Y +L+     +  +++ +      ++       +  +
Sbjct: 37  LESLRQEYYAL--RVNAAGNSKSYARLS----QLEGVVNALEQRRVLERNLTSQKDLEQE 90

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
            + D   + + +   +  +   ++ +  +  LL   D +   S +  + +G GG EA LF
Sbjct: 91  KDED-MRQLMEEENQVYTDLLAKQEQTMLQELLTLADDEVYPSLLFGVNSGAGGQEAMLF 149

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
             +L+ MY  Y     W  E  +    D GG +     I+ +  ++ +++E+GVHRVQRV
Sbjct: 150 AQELYEMYTSYFEHMDWDYEEFARETTDIGGLRHANILINDQDAYNWLRYEAGVHRVQRV 209

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           PATE SGR+HTS A++ V+P+ A++ V    +D+RI+T RASG+GGQHVNTTDSAVRI H
Sbjct: 210 PATEKSGRIHTSTASITVIPKPADVQVHTAEKDLRIETKRASGAGGQHVNTTDSAVRIVH 269

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG+ V   SE+SQ +NR  A+K L+ARL   + +       A +K Q GS +R+E+IR
Sbjct: 270 LPTGLAVEAQSERSQLKNREVALKRLQARLVQQQLESSEATHLATKKAQQGSLNRNEKIR 329

Query: 308 TYNFSQGRITDHRI-NLTLYKLEYVLQG--YIDDIINPLLTAHQAKMIGSASE 357
           TYNF Q RITDHRI N TL+ L   LQG   +  +I  L    +   +    E
Sbjct: 330 TYNFVQDRITDHRIQNGTLHNLNGFLQGGEQLSGLIEKLQLEQRKARLVEMLE 382


>gi|58260798|ref|XP_567809.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134117261|ref|XP_772857.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255475|gb|EAL18210.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229890|gb|AAW46292.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 480

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 117/360 (32%), Positives = 191/360 (53%), Gaps = 17/360 (4%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           ++  +  E E + ++        +       ++P++   + Y + KQ   ++   + D +
Sbjct: 114 NVYKKVTEDEAKATDIDIKSQIERA-RVQKELAPLVEVWNKYLELKQSIIEIKPFLED-S 171

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
             +  +           +    + + +  +LLP  +      ++ + AG GG E+AL   
Sbjct: 172 DPTLRQMFEAEHASLGTELDALITSTLPIVLLPPLSTAALPAVMSLNAGVGGLESALCTE 231

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG-----------VFSRMKFE 179
           DL RMY R+A  R WKVE +S  +   G     +  ++ +            V+  +++E
Sbjct: 232 DLARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKFEPPQYAEEGIEVYGALQWE 291

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEAAE--IDVDIPLEDIRIDTMRASGSGGQHV 237
            GVHR+QRVPA E  GR+HTS   V VLP   +      +  +D+RID MRA G+GGQHV
Sbjct: 292 KGVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHV 351

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N T+SAVR+THIPTGI V+    +SQHQNR  A ++LRARL + +       R A+R+ Q
Sbjct: 352 NRTESAVRLTHIPTGITVSMQDSRSQHQNRTWAWEILRARLSEKKHNEEVEARRASRRDQ 411

Query: 297 IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
           +   DRS++IRTYNF+Q R+TDHR  +T+  L++VL G  ++D+I+ +      + + + 
Sbjct: 412 VKGADRSDKIRTYNFNQDRLTDHRFGITVTGLQHVLDGEGLEDVISMMKKDFNERRLEAL 471


>gi|134079787|emb|CAK40922.1| unnamed protein product [Aspergillus niger]
          Length = 462

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 120/370 (32%), Positives = 196/370 (52%), Gaps = 28/370 (7%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L +  + +   ++E        KL +    ++PI S +  ++       +L +++ D  
Sbjct: 82  SLTSEHSTLSAHLAEVFD----AKLAKRVGELAPIASTLKEWEHANSSISELLSLLDDPE 137

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D+E+R LA  ++ + +  +  + + +   L+P+    D  C+LEIR G GG EA LF  
Sbjct: 138 TDAELRSLAVEDLESSKIALPAIADNLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAF 197

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG---YKEIVATISGRGVFSRMKFESGVHRVQR 187
           ++ RMY  + + R ++  ++     D        E V  +   G +  ++ ESGVHRVQR
Sbjct: 198 EVLRMYIAFCSRRGFRYSIIKQDVADGPAQDRLSEAVLEVDADGAYDILRTESGVHRVQR 257

Query: 188 VPATEASGRVHTSAATVAVLPEAA---------------EIDVDIPLEDIRIDTMRASGS 232
           VPATEA GR HTSA +V +LP                    D  +  +++R + MRA G+
Sbjct: 258 VPATEAKGRTHTSAVSVMILPSFPDSGSGLDSSLNFEDPNSDYYVDPQEVRTEKMRAGGA 317

Query: 233 GGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T+SA+R+THIPTG +V+    +SQH NR +A +VLRARL +  R+    E   
Sbjct: 318 GGQHVNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLRARLAEARREAREQELVN 377

Query: 292 NRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTA 346
            R+  +G      R ++IRTYN+ Q R TDHR  LT++ L+ VL G   ++ +++ + T 
Sbjct: 378 LRRGAMGGVARMGRGDKIRTYNYGQNRCTDHRSGLTIHNLDSVLDGGEGLETVMDSVRTW 437

Query: 347 HQAKMIGSAS 356
              + I + +
Sbjct: 438 LVEREIEAMA 447


>gi|47096965|ref|ZP_00234541.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47014675|gb|EAL05632.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 314

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 129/277 (46%), Positives = 191/277 (68%), Gaps = 5/277 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y    ++  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+R++A+ E   ++KE  +LE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLGEKLDD-EMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A ++G   FSRMK+E+G H
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAH 181

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           RVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ VNTT SA
Sbjct: 182 RVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSA 241

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYD 279
           VR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD
Sbjct: 242 VRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYD 278


>gi|294507807|ref|YP_003571865.1| peptide chain release factor RF-2 [Salinibacter ruber M8]
 gi|294344135|emb|CBH24913.1| peptide chain release factor RF-2 [Salinibacter ruber M8]
          Length = 349

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 95/345 (27%), Positives = 159/345 (46%), Gaps = 14/345 (4%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
            E+     +    D   +  E    I+     I  ++  K++ +D+ T+      + E  
Sbjct: 4   EELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWEDVKEQAEDIETLQLLSEEEGEDM 63

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
                   A  + + +  + +    L  D DD++  I+EI  G GG+E+  +   L RMY
Sbjct: 64  SDEID---AEARRLEQKLDRLELESLLDDPDDERDAIVEINPGAGGTESQDWAEMLLRMY 120

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  + + VE++     ++ G K     + GR  + R+K E+GVHR+ R+   +A  R
Sbjct: 121 MRWAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRLKSETGVHRLVRISPFDADSR 180

Query: 197 VHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-- 253
            HTS A+V V PE  +   VD+   +I + T R+ G GGQHVN  ++ VR+    T    
Sbjct: 181 RHTSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQHVNKVETGVRLIWTGTLSNG 240

Query: 254 ------MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
                    + E+SQHQNR RA ++L++R+Y  ER+    E+      +  S +   +IR
Sbjct: 241 EETTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEEEKERLESSK-KSIEWGSQIR 299

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           +Y       + DHR +      E VL+G +D  I   L   +   
Sbjct: 300 SYVLHPYKMVNDHRTDTKRNDAEAVLEGGLDPFIKAYLLKGKKDR 344


>gi|295657325|ref|XP_002789232.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01]
 gi|226284000|gb|EEH39566.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01]
          Length = 438

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 188/350 (53%), Gaps = 30/350 (8%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            + +  A +  +++ES +     K  +    ++   + +  +D+  +   +L+ ++ D +
Sbjct: 51  SIADEHASLTSKLAESFNP----KTAKRVGELATTATALKEWDKAHESISELNALLEDSS 106

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DS++R LA  ++      +  L   +   L+P+    D  C+LE+R G GG EA +F  
Sbjct: 107 TDSDLRSLALEDLQTTTASLSVLSENLKQALIPRHPFADLPCLLELRPGAGGDEAGIFAN 166

Query: 131 DLFRMYERYAALRKWKVEVL---SSSDNDDGGYKEI----VATISGRGVFSRMKFESGVH 183
           +L RMY  + A R  +  +L   S +    GG ++     V  I   G +  ++ E+GVH
Sbjct: 167 ELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVMEIETPGSYETLRTEAGVH 226

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVD---------------IPLEDIRIDTMR 228
           RVQRVPATE+ GR HTSA +V +LP       +               I   ++ ++ MR
Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPRNGEEGDGELNFDDPNSDFYIDPREVNVEKMR 286

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG+GGQHVN T+SA+R+THIPTGI+V     +SQH+NR +A ++LRAR+    R+    
Sbjct: 287 ASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQQRREAREE 346

Query: 288 ERSANRKLQ---IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           E    R+     +G   R ++IRTYNF Q R TDHR  LTL+ L  +++G
Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFGQNRCTDHRSGLTLHNLVDIMEG 396


>gi|72383384|ref|YP_292739.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           NATL2A]
 gi|72003234|gb|AAZ59036.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
           marinus str. NATL2A]
          Length = 313

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 87/315 (27%), Positives = 154/315 (48%), Gaps = 6/315 (1%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  + +++      +   +D +  +  +  D +   L++      + +         
Sbjct: 1   MRQLDEVKAELEKLITWRGAIEDANLSVELYELDPDEEILSEAHNGLEQLKQEL--ERWE 58

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              L     D +  +L I AG GG++A  +   L RMY R+A     KV +   S+ ++ 
Sbjct: 59  TERLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWAENNGMKVSINELSEGEEA 118

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDI 217
           G K +   I G   +  ++ E G HR+ R+    A+G+  TS A V V+P+   E++++I
Sbjct: 119 GIKSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEI 178

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
           P +D+ I T R+ G+GGQ+VN  ++AVRI H+PTGI V  + E+SQ QN+ +AM +L+++
Sbjct: 179 PEKDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSK 238

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           L  +  ++ A E +  R   I       +IR Y F   + + D R       ++ V+ G 
Sbjct: 239 LMVIAVEQRAAEIADIR-GDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGK 297

Query: 336 IDDIINPLLTAHQAK 350
           ID  I  LL  +  +
Sbjct: 298 IDIFIQSLLRQNIEE 312


>gi|332886361|gb|EGK06605.1| peptide chain release factor 2 [Dysgonomonas mossii DSM 22836]
          Length = 318

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 92/324 (28%), Positives = 153/324 (47%), Gaps = 19/324 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              I  +   I  Y++ K    +L              +            I  LE    
Sbjct: 1   MKIIRGLKGWIEGYNEVKASTDELQLAFDFQKEGITTEEEVDEAYKNALSLIENLEL--- 57

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              + +  +D    +L+I +G GG+E   +   LFRMY+R+   +K+K  + +  D D+ 
Sbjct: 58  -KNMLRREEDKLGAVLKINSGAGGTEGQDWASMLFRMYQRWCEDKKYKTTITNWQDGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K     + G   +  +K E+GVHR+ RV    A G+  TS A+V V+P     ID+DI
Sbjct: 117 GIKTATLQVEGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVVPLVDDTIDIDI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLR 268
            L DI  DT R+SG+GGQ+VN  ++ VR+ +             ++  +  +SQ  N+  
Sbjct: 177 NLSDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQFGNKDN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           A+++L+++LY++E +R + E+S     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AIRLLKSQLYELELERRSREQSKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAK 350
            +  V+ G +DD I   L  +  +
Sbjct: 294 NVNAVMDGDLDDFIKEYLMEYGEE 317


>gi|213962528|ref|ZP_03390790.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
 gi|213954854|gb|EEB66174.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
          Length = 317

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 158/312 (50%), Gaps = 12/312 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +      +  Y++ +    D+  ++          D    +       I  LE    
Sbjct: 2   MRELRTQKKWVEDYEEAESLTSDVEVLLDFFKEGEATADEVDQQYAQALHAIEALE---- 57

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  D  D  S +L+I AG GG+E+  +   L RMY  +   +K+KV+ L+  + D  
Sbjct: 58  FRNMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVA 117

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I+++I
Sbjct: 118 GIKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEI 177

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRAR 276
              DI  +TMR+SG+GGQ+VN  ++AVR+ H PTGI++  S  +SQ  N+ +A+++L+++
Sbjct: 178 NPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQ 237

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQ 333
           LY++E K+   +R      K++I  G    +IR Y     + + D R N     ++ V+ 
Sbjct: 238 LYEIELKKRQAKRDEIEAGKMKIEWG---SQIRNYVMHPYKLVKDVRTNYESTDVDSVMN 294

Query: 334 GYIDDIINPLLT 345
           G +D+ +   L 
Sbjct: 295 GELDEFLKAYLM 306


>gi|75908996|ref|YP_323292.1| peptide chain release factor 2 [Anabaena variabilis ATCC 29413]
 gi|75702721|gb|ABA22397.1| bacterial peptide chain release factor 2 (bRF-2) [Anabaena
           variabilis ATCC 29413]
          Length = 292

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 83/289 (28%), Positives = 142/289 (49%), Gaps = 9/289 (3%)

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     ++ +++             +          L     D +  +L I AG GG+
Sbjct: 3   ELLELETDEALLQEAESTITKLNRDLDQW-----ELQQLLSGPYDAEGAVLTINAGAGGT 57

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +A  +   L RMY R+A  + +KV +   S+ D+ G K     I+GR  +  ++ E+G H
Sbjct: 58  DAQDWAFMLLRMYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTH 117

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+    A+G+  TS A V V+P+    + +DIP +D+ I T R+ G GGQ+VN  ++
Sbjct: 118 RLVRISPFNANGKRQTSFAGVEVMPQLDNTVQLDIPDKDLEITTTRSGGKGGQNVNKVET 177

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+ H+PTGI V  + E+SQ QN+ +A+  L+A+L  + +++ A E +  R   +    
Sbjct: 178 AVRVVHLPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQIRGDMVE-AS 236

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
              +IR Y F   + + D R N     +  V+ G +D  I   L     
Sbjct: 237 WGNQIRNYVFHPYQMVKDLRTNAETTAIADVMNGELDMFIQAYLRQENQ 285


>gi|168702592|ref|ZP_02734869.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246]
          Length = 342

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 87/340 (25%), Positives = 141/340 (41%), Gaps = 13/340 (3%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
            ++E + +E    +   K       +    + +  Y++      D+  +      D+   
Sbjct: 3   DQLEAKQAEGDFWNNPEKAKSVIGQLKVCNALLKPYEELTAAANDIKAMAELAEEDAAFE 62

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
              +  +   E +    E +I          D +S I+ I+ G GG++A  F   LFR Y
Sbjct: 63  SELEPALQKAETQYEAFELQIMM----GGKHDSRSAIVTIKPGAGGTDACDFAEMLFRAY 118

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A    + VE      N + G   +   I G   +  M+ E GVHR+ R+        
Sbjct: 119 GRWAQRHGFSVEDEDIEPNQEAGVASVSFKIVGPYAYGYMQSEIGVHRLVRISPFGGGDT 178

Query: 197 VHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
             TS A + VLPE  +     I   D  + T    G GGQHVN T S VR+ H       
Sbjct: 179 RQTSFAAIDVLPELPDDIEIVIKDTDYEVQTFSTGGPGGQHVNKTQSGVRLIHKSGIRAE 238

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE--RSANRKLQIGSGDRSERIRTYNFSQ 313
               +SQH+N+  A+K+L+ RL  VE ++   +  +S + K +I  G    +IR+Y    
Sbjct: 239 CRMGRSQHKNKAEALKMLQTRLEAVEEQKRMGDAVKSYDAKGEIAFG---SQIRSYVLQP 295

Query: 314 G-RITDHR--INLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
              + D R  I++    +  VL G  D  ++  L    AK
Sbjct: 296 YTLVRDERDGIDVKTPAVNDVLDGNFDQFMHAYLRHKAAK 335


>gi|332877580|ref|ZP_08445324.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684429|gb|EGJ57282.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 315

 Score =  180 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 89/312 (28%), Positives = 157/312 (50%), Gaps = 12/312 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +      +  Y++ +    D+  ++          +    +       I  LE    
Sbjct: 1   MRELRVKKKWVEDYEEAESLTSDVEVMLDFLKDGEASAEEVDQQYTQALHAIEALE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  D  D  S +L+I AG GG+E+  +   L RMY  +   +K+KV+ L+  + D  
Sbjct: 57  FRNMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I+++I
Sbjct: 117 GVKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRAR 276
              DI  +TMR+SG+GGQ+VN  ++AVR+ H PTGI++  S  +SQ  N+ +A+++L+++
Sbjct: 177 NPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQ 236

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQ 333
           LY++E K+   +R      K++I  G    +IR Y     + + D R       ++ V+ 
Sbjct: 237 LYEIELKKRQAKRDEIEAGKMKIEWG---SQIRNYVMHPYKLVKDVRTGYESTDVDSVMN 293

Query: 334 GYIDDIINPLLT 345
           G +DD +   L 
Sbjct: 294 GELDDFLKAYLM 305


>gi|34580696|ref|ZP_00142176.1| peptide chain release factor RF-2 [Rickettsia sibirica 246]
 gi|28262081|gb|EAA25585.1| peptide chain release factor RF-2 [Rickettsia sibirica 246]
          Length = 285

 Score =  180 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 94/287 (32%), Positives = 154/287 (53%), Gaps = 12/287 (4%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  +D E     + ++  +     + E       L     D  +C LEI AG GG+E+
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFET----ECLFSGEADGNNCFLEINAGAGGTES 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   + RMY R+A    +K E+++  + ++ G K     I G+  +   K E+GVHR+
Sbjct: 57  HDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTETGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAV
Sbjct: 117 VRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHIPTG +    S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G 
Sbjct: 177 RITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWG- 235

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y       + D R +      + VL G +++ ++  L  +
Sbjct: 236 --HQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAMN 280


>gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f]
 gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f]
          Length = 366

 Score =  180 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 149/330 (45%), Gaps = 14/330 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I  L+ R  E+E   ++        +       +S +   I+  D  ++   DL   + 
Sbjct: 24  DIEGLRRRAQELEQEAADPDLWSDQARAQAVTRRLSGVKGDIARVDGLRRRLDDLIAALD 83

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D        +  L  +         +    L     D++  I+++ AG GG +AA 
Sbjct: 84  LGDEDLLAEMAVDLPSLTRDISA------LEVRTLLSGEYDERDAIVQLSAGAGGVDAAD 137

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +  EV  +S+ ++ G K     +     +  ++ E GVHR+ R
Sbjct: 138 WTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVRCPYAYGTLRSEHGVHRLVR 197

Query: 188 VPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V V P       VDI  +++RID  R+SG GGQ VNTTDSAVRI
Sbjct: 198 ISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQGVNTTDSAVRI 257

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           TH+PTGI+V   +E+SQ QN+  AM VL+A+L +  R   A E+         +  G   
Sbjct: 258 THLPTGIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGGPQDVSFG--- 314

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVL 332
            +IR Y     + + D R  +       VL
Sbjct: 315 SQIRNYVLHPYQMVKDLRTEVETSNTGAVL 344


>gi|228469749|ref|ZP_04054715.1| peptide chain release factor 2, programmed [Porphyromonas uenonis
           60-3]
 gi|228308684|gb|EEK17417.1| peptide chain release factor 2, programmed [Porphyromonas uenonis
           60-3]
          Length = 328

 Score =  180 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 90/328 (27%), Positives = 149/328 (45%), Gaps = 22/328 (6%)

Query: 31  AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEI 90
              +       I   I      D   QE    +    +   + +  D A    +      
Sbjct: 3   RAQQQMRRVGEIRSWIEAFEAVDAATQEVALAYDFYKEEAVEEQDVDDAYARAIK----- 57

Query: 91  RELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVL 150
             L  ++    +    +D    +L++ AG GG+E+  +   L RMY+R+A    +KV + 
Sbjct: 58  --LVEDLELRNMLSAEEDRLGAVLKVNAGAGGTESQDWASMLVRMYQRWAERSGYKVTIT 115

Query: 151 SSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-E 209
           +  D DD G K +   I G   +  +K E+GVHR+ RV    A G+  TS A+V V+P  
Sbjct: 116 NWQDGDDAGVKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLV 175

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEK 260
              I+V++    +  DT R+SG+GGQ+VN  ++ VR+ +  T          ++  +  +
Sbjct: 176 DDSIEVEVNPALLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGVPEEIVIENTETR 235

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGRITD 318
           SQ +NR  A+++LR++LYD E +R    ++     K +I  G    +IR+Y F   R+ D
Sbjct: 236 SQLENRENALRLLRSQLYDKELERRRAAQNEVEANKKKIEWG---SQIRSYVFDDRRVKD 292

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTA 346
           HR       +  V+ G ID  I   L  
Sbjct: 293 HRTGYQTSDVNGVMDGDIDAFIKAYLMQ 320


>gi|313886616|ref|ZP_07820328.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923912|gb|EFR34709.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 328

 Score =  180 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 91/328 (27%), Positives = 148/328 (45%), Gaps = 22/328 (6%)

Query: 31  AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEI 90
              +       I   I      D   QE    +    +   + +  D A    +      
Sbjct: 3   RAQQQMRRVGEIRSWIEAFEAVDAATQEVALAYDFYKEEAVEEQDVDDAYARAIK----- 57

Query: 91  RELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVL 150
             L  ++    +    +D    +L+I AG GG+E+  +   L RMY+R+A    +KV + 
Sbjct: 58  --LVEDLELRNMLSAEEDRLGAVLKINAGAGGTESQDWASMLVRMYQRWAERSGYKVTIT 115

Query: 151 SSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-E 209
           +  D DD G K +   I G   +  +K E+GVHR+ RV    A G+  TS A+V V+P  
Sbjct: 116 NWQDGDDAGIKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLV 175

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEK 260
              I+V++    +  DT R+SG+GGQ+VN  ++ VR+ +  T          ++  +  +
Sbjct: 176 DDSIEVEVNPGLLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGETEEIVIENTETR 235

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGRITD 318
           SQ  NR  A+++LR++LYD E +R    +S     K +I  G    +IR+Y F   R+ D
Sbjct: 236 SQMDNRENALRLLRSQLYDKELERRRAAQSEVEANKKKIEWG---SQIRSYVFDDRRVKD 292

Query: 319 HRINLTLYKLEYVLQGYIDDIINPLLTA 346
           HR       +  V+ G +D  I   L  
Sbjct: 293 HRTGYQTSDVNGVMDGDLDAFIKAYLMQ 320


>gi|17227769|ref|NP_484317.1| peptide chain release factor 2 [Nostoc sp. PCC 7120]
 gi|17135251|dbj|BAB77797.1| peptide chain release factor [Nostoc sp. PCC 7120]
          Length = 292

 Score =  180 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 9/289 (3%)

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     ++ +++             +          L     D +  +L I AG GG+
Sbjct: 3   ELLELETDEALLQEAESTITKLNRDLDQW-----ELQQLLSGPYDAEGAVLTINAGAGGT 57

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +A  +   L RMY R+A  + +KV +   S+ D+ G K     I+GR  +  ++ E+G H
Sbjct: 58  DAQDWAFMLLRMYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTH 117

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+    A+G+  TS A V V+P+    + +DIP +D+ I T R+ G GGQ+VN  ++
Sbjct: 118 RLVRISPFNANGKRQTSFAGVEVMPQLDNTVQLDIPDKDLEITTTRSGGKGGQNVNKVET 177

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVR+ H+PTGI V  + E+SQ QN+ +A+  L+A+L  + +++ A E +  R   +    
Sbjct: 178 AVRVVHLPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQIRGDMVE-AS 236

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
              +IR Y F   + + D R N+    +  V+ G +D  I   L     
Sbjct: 237 WGNQIRNYVFHPYQMVKDLRTNVETTAIADVMNGELDMFIQSYLRQENQ 285


>gi|145629736|ref|ZP_01785532.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
 gi|144978073|gb|EDJ87852.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
          Length = 267

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 126/269 (46%), Positives = 185/269 (68%), Gaps = 9/269 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  LK R+ E+E  + +   +   D +   ++EY+ +  ++   + + Q  Q
Sbjct: 2   MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEIR
Sbjct: 62  NIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIR 117

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EA +F GDLFRMY RYA  ++W +EVLS ++++ GG+KEI+  +SG GV+ ++K
Sbjct: 118 AGTGGDEAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLK 177

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAV+PE  E ++ +I   D+RIDT R+SG+GGQH
Sbjct: 178 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 237

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
           VNTTDSAVRITHIPTGI+V    E+SQH+
Sbjct: 238 VNTTDSAVRITHIPTGIVVECQDERSQHK 266


>gi|219123603|ref|XP_002182112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406713|gb|EEC46652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 406

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 89/363 (24%), Positives = 159/363 (43%), Gaps = 18/363 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIK-----LTEEYAAISPIISKISIYDQKKQEEQDL 62
           ++  L+++ A++E   S+    D         +  + +  + ++++I  + +   + Q  
Sbjct: 43  KLPALQSQIADLETEQSQPDFWDEANTSRAAIVNAQVSTATRLLTRIQAWQEWHGDAQAA 102

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++    S+   R +   E  +    +RE  +     LL     D     L + AG GG
Sbjct: 103 LEILSQLASEE--RAMLLDEFRSAIARLREDSDRFELELLLSGPYDHAPARLLLTAGAGG 160

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +EA  +VGDL RMY+R+         V      +  GYK +   +SG   +  ++ E G 
Sbjct: 161 TEANDWVGDLKRMYQRHCEAMGLSCVVQDEQAGEAVGYKSVELLVSGDNAYGWLQGEKGA 220

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-------DIRIDTMRASGSGGQ 235
           HR+ R+    A+ +  T+ A V V P+    D D           ++ I TMRA G GGQ
Sbjct: 221 HRMVRLSPFNANNKRQTTFAGVDVAPDILNQDDDAYWNTIDVPESELEITTMRAGGKGGQ 280

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           +VN  +SAVRI H+P+G+ V  + E+SQ  N+  A+K L+A+L  + +++   E    R 
Sbjct: 281 NVNKVNSAVRIKHLPSGLQVKCAQERSQSMNKNIALKRLKAQLLAIVQEQRVAEIKEIRG 340

Query: 295 LQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMI 352
             +       +IR Y F     + D R       ++  + G  +++ I   L     +  
Sbjct: 341 DMVE-ASWGAQIRNYVFHPYKMVKDQRTGWETSNVQAFMDGDLLEECIGSFLRHKAEEQR 399

Query: 353 GSA 355
              
Sbjct: 400 KEQ 402


>gi|242050470|ref|XP_002462979.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
 gi|241926356|gb|EER99500.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
          Length = 363

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 89/322 (27%), Positives = 152/322 (47%), Gaps = 5/322 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+   A +E + ++S   D   K  E   +++ +  ++ + +  K + ++  T++  
Sbjct: 43  LEQLEEDIASLEKKSADSSLWDDPSKAQEILVSLTEVKDRVKLLNDFKLQVEEAETIVKL 102

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                 I      E   I K + +  +      L     D +  ++ I AG GG++A  +
Sbjct: 103 TEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINISAGAGGTDAQDW 162

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R 
Sbjct: 163 ADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYAYGYISGEKGTHRIVRQ 222

Query: 189 PATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               A G   TS A V V+P      + VDIP ED+ I   RA G GGQ+VN  ++AVR+
Sbjct: 223 SPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLDISFTRAGGKGGQNVNKVETAVRM 282

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            HIPTGI V  S E+SQ  N+++A+  L+A+L  +  ++ A+E    R   +   +  ++
Sbjct: 283 VHIPTGIAVRCSEERSQLANKIKALNRLKAKLLVIAEEQRASEIKQIRGDMVK-AEWGQQ 341

Query: 306 IRTYNFSQGR-ITDHRINLTLY 326
           IR Y F   + + D R      
Sbjct: 342 IRNYVFHPYKLVKDVRTGCETS 363


>gi|193078655|gb|ABO13705.2| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
          Length = 305

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 96/295 (32%), Positives = 157/295 (53%), Gaps = 12/295 (4%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ + +  +  + + +S + D+      +      E  
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQ-----SELSTAEEEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI+AG+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V + PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DI   D+R DT RASG+GGQH+N TDSAVR+THIPTGI+V   +++SQH NR  A K 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQ 235

Query: 273 LRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
           LRA+LY++E ++         + K  IG G    +IR+Y     RI D R  + +
Sbjct: 236 LRAKLYELEMQKRNEAAQALEDSKSDIGWG---SQIRSYVLDDSRIKDLRTGVEI 287


>gi|251771888|gb|EES52462.1| peptide chain release factor 2 [Leptospirillum ferrodiazotrophum]
          Length = 294

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 106/281 (37%), Positives = 152/281 (54%), Gaps = 8/281 (2%)

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D EI   A   +      I +LE       +  D   D   +LEI  G GG+E+  +  
Sbjct: 3   EDPEILGEAARILPLFVSRIDQLEL----EEILSDEYSDSPALLEIHPGAGGTESQDWAQ 58

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY R+A  + ++  V+     ++ G K     + G   F  ++ ESGVHR+ R+  
Sbjct: 59  MLLRMYLRWAESKGYETAVIDLQPGEEAGIKSATLRVKGESAFGYLQAESGVHRLVRISP 118

Query: 191 TEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +A+ R HTS A+V V PE   E+ V+I  EDIRIDT RAS +GGQHVN T SAVR+THI
Sbjct: 119 FDAAKRRHTSFASVFVYPEIEGEVTVEIRDEDIRIDTFRASSAGGQHVNKTSSAVRLTHI 178

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ-IGSGDRSERIR 307
           PTGI++ + +E+SQ QNR  A KVL+ARL+++ER++   E  A    +         +IR
Sbjct: 179 PTGIVISSQNERSQIQNREMAFKVLKARLFELERQKKKAELDAISGAESKKENAWGSQIR 238

Query: 308 TYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +Y     + + DHR  +   +++ VL G ID  I   L A 
Sbjct: 239 SYVLQPYQIVKDHRTGIESSRVDEVLDGKIDLYIRGYLLAR 279


>gi|332520510|ref|ZP_08396972.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4]
 gi|332043863|gb|EGI80058.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4]
          Length = 317

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 12/312 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +      +  Y+      +DL  +   +  +    +         +  I +LE    
Sbjct: 1   MKTLRVKKKWVEDYNTANTLIEDLDVIYEFYKENEATLNDVTNRFTKAQTAIEDLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  +  D  S +L+I AG GG+E+  +   L RMY  YA    +KV+ L+  + D  
Sbjct: 57  FKNMLSEEGDSLSAVLQITAGAGGTESCDWAQMLMRMYLMYAEKNNFKVKELNLQEGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I+++I
Sbjct: 117 GIKTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              DI I T R+SG+GGQ+VN  ++ V++TH P+GI +  S  +SQH NR RA+++L+++
Sbjct: 177 NPADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRSRALQMLKSQ 236

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQ 333
           LY++E ++  ++R      K++I  G    +IR Y     + + D R       ++ V+ 
Sbjct: 237 LYEIELQKQLSQREDIEAAKMKIEWG---SQIRNYVMHPYKLVKDVRTGFESGNVDAVMD 293

Query: 334 GYIDDIINPLLT 345
           G I   +   L 
Sbjct: 294 GDITPFLKSYLM 305


>gi|206890892|ref|YP_002247867.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742830|gb|ACI21887.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 287

 Score =  179 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 112/286 (39%), Positives = 163/286 (56%), Gaps = 12/286 (4%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +         +    + EV  I+ +I  LE      LL K   D  + I+ I  G GG+E
Sbjct: 3   IAETEEDGYLLLKDLEEEVENIKSQIEHLE----IKLLLKGEHDKNNAIVSIHPGAGGTE 58

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY R+A  + +KVE++     ++ G K++  T+ G+  +  +K ESGVHR
Sbjct: 59  SQDWAEILMRMYLRWAEKKGFKVEIVDLQLGEEAGIKDVTFTVEGQYAYGYLKCESGVHR 118

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + RV   +A+ R HTS A V+VLPE  +   V+I  EDIR+DT RASG+GGQHVN   SA
Sbjct: 119 LVRVSPFDANKRRHTSFAAVSVLPEIEDNIQVEIKDEDIRVDTFRASGAGGQHVNKVSSA 178

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSG 300
           VRI HIPTGI+V   +E+SQH+NR  AMK+LR+++Y + +K   ++  +    K +I  G
Sbjct: 179 VRIVHIPTGIIVTCQTERSQHRNREIAMKILRSKIYALLQKEQEDKIKSITGNKKEIAWG 238

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y     R I DHR ++ +Y +E VL G ID  I   L 
Sbjct: 239 ---SQIRSYILHPYRLIKDHRTDIEVYNVEDVLDGNIDIFIETYLK 281


>gi|323337560|gb|EGA78805.1| Mrf1p [Saccharomyces cerevisiae Vin13]
 gi|323348703|gb|EGA82945.1| Mrf1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 303

 Score =  179 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 126/298 (42%), Positives = 174/298 (58%), Gaps = 11/298 (3%)

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           SD  +R  A+ E   +  +     + +   LLP     DK  +LE+R G GG EA +F  
Sbjct: 4   SDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGIEAMIFTQ 63

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
           +L  MY  YA  RKWK  ++S ++N+ G G  + + +I   G + R++FE+GVHRVQR+P
Sbjct: 64  NLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRIP 123

Query: 190 ATEASGRVHTSAATVAVLPEA--------AEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           +TE  GR HTS A V VLP+            +      +IR+D MRASG GGQHVNTTD
Sbjct: 124 STETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTTD 183

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVR+THIP+GI+V+   E+SQH+N+ +A  +LRARL + ER     +    RK Q+ S 
Sbjct: 184 SAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEKEEKERKARKSQVSST 243

Query: 301 DRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSASE 357
           +RS++IRTYNF Q RITDHR   TL  L  VL G  +D++I  +      +      E
Sbjct: 244 NRSDKIRTYNFPQNRITDHRCGFTLLDLPGVLSGERLDEVIEAMSKYDSTERAKELLE 301


>gi|212550868|ref|YP_002309185.1| peptide chain release factor 2 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549106|dbj|BAG83774.1| peptide chain release factor 2 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 328

 Score =  179 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 160/324 (49%), Gaps = 19/324 (5%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
             ++  AI  I S +  Y+  +   ++L      +       +        +   I +LE
Sbjct: 7   AKKQIKAIGIIKSWVDAYNVVQTAVEELQLAFDFNKEGVVSEEEVDKVYSDVVLLIEQLE 66

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                  +    +D    +++I AG GG+EA  +V  L+RMY R+  ++ +KV + +  +
Sbjct: 67  L----KNMLHSEEDHLGAVIKINAGAGGTEAQDWVAMLYRMYSRWCEVKMYKVNITNWLE 122

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEI 213
            DD G K +   + G   F  +K E+GVHR+ RV    A G+  TS A+VAV+P     I
Sbjct: 123 GDDAGIKTVTLQVEGDDAFGYLKSENGVHRLVRVSPYNAQGKRMTSFASVAVVPLIDDTI 182

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP--------TGIMVTS-SEKSQHQ 264
           ++DI L DI  DT R+SG+GGQ+VN  ++ VR+ +          + I++ +   +SQ  
Sbjct: 183 EIDINLGDITWDTFRSSGAGGQNVNKVETGVRLHYNYKDPNSGETSEIVIENTESRSQFG 242

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           N+  A+++L++ LY +E KR     +     K +I  G    +IR+Y F   R+ DHR  
Sbjct: 243 NKDNAIRLLKSHLYKLELKRRRQAFAKIEAHKKKIEWG---SQIRSYVFDDRRVKDHRTG 299

Query: 323 LTLYKLEYVLQGYIDDIINPLLTA 346
                ++ V+ G +DD+I   L A
Sbjct: 300 WQTSNVQAVMDGDLDDLIKAYLMA 323


>gi|225012847|ref|ZP_03703280.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
 gi|225002969|gb|EEG40946.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
          Length = 314

 Score =  179 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 91/312 (29%), Positives = 156/312 (50%), Gaps = 12/312 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   +S Y+  KQ   DL  ++    S          +  +  + +  LE    
Sbjct: 1   MKQLRTLKKWVSDYEIIKQGIDDLEVLMEFEKSGDAEAVEVNSQYESSLELLEALE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  D  DD S +L+I AG GG+E+  +   L RMY  +   + +K++ L+    D  
Sbjct: 57  FRNMLSDEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWGEKQGYKIKELNHQAGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-I 217
           G K +   + G   F  +K E+GVHR+ R+   +++ + HTS A+V V P   +     I
Sbjct: 117 GIKTVTLELEGDFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIVI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRAR 276
              D   +TMRASG+GGQ+VN  ++AVR+ H PTGI++  S  +SQ +N+ +AM++LR++
Sbjct: 177 SPSDYTWETMRASGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLENKNKAMQLLRSQ 236

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQ 333
           LY++E ++  + R      K +I  G    +IR Y     + + D R    +  ++ V+ 
Sbjct: 237 LYEIELQKKLSARDEIEASKKKIEWG---SQIRNYVMHPYKLVKDVRTQHEVTDVDAVMN 293

Query: 334 GYIDDIINPLLT 345
           G ID  +   L 
Sbjct: 294 GQIDPFLKAYLM 305


>gi|157827015|ref|YP_001496079.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389]
 gi|157802319|gb|ABV79042.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389]
          Length = 285

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 96/287 (33%), Positives = 158/287 (55%), Gaps = 12/287 (4%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  +D EI    + ++ ++     + E       L     D  +C LEI AG GG+E+
Sbjct: 1   MAEAENDLEIMQQVEKDLQSLSTIAAKFET----ECLFSGEADSNNCFLEINAGAGGTES 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   + RMY R+A    +K E+++  + ++ G K     I GR  +  +K E+GVHR+
Sbjct: 57  HDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWLKTEAGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAV
Sbjct: 117 VRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHIPTG +    S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G 
Sbjct: 177 RITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWG- 235

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y     + + D R +      + VL G +++ ++  L  +
Sbjct: 236 --HQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAMN 280


>gi|229496829|ref|ZP_04390538.1| peptide chain release factor 2, programmed [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316240|gb|EEN82164.1| peptide chain release factor 2, programmed [Porphyromonas
           endodontalis ATCC 35406]
          Length = 318

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 19/325 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  I   I  Y+  +   +++      +       +            I  +E    
Sbjct: 1   MRKVKEIRRWIEAYESVESAVEEVKLSFDFYKEGVAEEEEVDQAYQIALSLIENVELRNM 60

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
                +  +D    +L++ AG GG+E+  +   L R+Y+R+A    +KV + +  D D+ 
Sbjct: 61  ----LRREEDRLGAVLKVNAGAGGTESQDWASMLVRLYQRWAENHDYKVTITNWQDGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-I 217
           G K +   I G   +  +K E+GVHR+ RV    A G+  TS A+V V+P   +     +
Sbjct: 117 GIKTVTMQIEGDLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEIAV 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLR 268
              ++  DT R+SG+GGQ+VN  ++ VR+ +             ++  +  +SQ  NR  
Sbjct: 177 NPANLSWDTFRSSGAGGQNVNKVETGVRLHYQFKDPDTGEEREIVIENTESRSQLDNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           A+++LR++LYD+E ++    ++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 ALRLLRSQLYDIELEKRRAAQAEVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAKM 351
            +  V+ G IDD I   L     + 
Sbjct: 294 NVNAVMDGDIDDFIKAYLMEFGGEK 318


>gi|163754877|ref|ZP_02161998.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
 gi|161324944|gb|EDP96272.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
          Length = 316

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 158/312 (50%), Gaps = 12/312 (3%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +      +  Y++      DL  +   +       +    +    + +I +LE    
Sbjct: 1   MKKLRGEKKWVGDYNEVADLIGDLEVLYEFYKEGDASEEEVTAQFEKTKTKIEDLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  D  D  S +L++ AG GG+E+  +   L RMY  +A  + +KV+ L+  + D  
Sbjct: 57  FRNMLSDEGDSMSAVLQVTAGAGGTESCDWASMLMRMYLMFAEKQGYKVKELNYQEGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++DI
Sbjct: 117 GIKTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              DI I T R+SG+GGQ+VN  ++ V++TH P+GI +  S  +SQH NR RAM++L+++
Sbjct: 177 NPADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRTRAMQMLKSQ 236

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQ 333
           LY++E K+    R      K++I  G    +IR Y     + + D R       ++ V+ 
Sbjct: 237 LYEIELKKQMEARDDIEAGKMKIEWG---SQIRNYVMHPYKLVKDVRTAHETGNVDAVMN 293

Query: 334 GYIDDIINPLLT 345
           GYID+ +   L 
Sbjct: 294 GYIDEFLKAYLM 305


>gi|16331171|ref|NP_441899.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803]
 gi|1653665|dbj|BAA18577.1| peptide chain release factor [Synechocystis sp. PCC 6803]
          Length = 288

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 10/287 (3%)

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++   +  + + +         ++  R          L     D K   L I AG GG+
Sbjct: 2   ELLELEDDQALLTEAETTLEQLQKELDRW-----ELQQLLSGPYDAKGATLTINAGAGGT 56

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +A  +   L RMY R++  + +KV +   S+ D+ G K +   I GR  +  +K E G H
Sbjct: 57  DAQDWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTH 116

Query: 184 RVQRVPATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           R+ R+    A+G+  TS A V V+P      I +DIP +D+ I T RA G GGQ+VN  +
Sbjct: 117 RLVRISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVE 176

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +AVRI H+PTG+ V  + E+SQ QN+ +A+ +L+A+L  V  ++ A   +  R   +   
Sbjct: 177 TAVRIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVE-A 235

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               +IR Y F   + + D R N+    +  V+ G + D I   L  
Sbjct: 236 AWGTQIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLRH 282


>gi|238650499|ref|YP_002916351.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic]
 gi|238624597|gb|ACR47303.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic]
          Length = 285

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 12/287 (4%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  +D E     + ++  +     + E       L     D  +C LEI AG GG+E+
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFET----ECLFSGEADGNNCFLEINAGAGGTES 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   + RMY R+A    +K E+++  + ++ G K     I G+  +   K E+GVHR+
Sbjct: 57  HDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS A+  V PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAV
Sbjct: 117 VRISPFNAAGKRMTSFASSWVYPEIDDNIAIIIEDKDLRIDTFRASGAGGQHVNTTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHIPTG++    S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G 
Sbjct: 177 RITHIPTGMVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWG- 235

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y     + + D R +      + VL G +++ ++  L  +
Sbjct: 236 --HQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAMN 280


>gi|186681801|ref|YP_001864997.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
 gi|186464253|gb|ACC80054.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
          Length = 289

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 9/287 (3%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     ++ +++             +          L     D +  +L I AG GG++
Sbjct: 1   MLELETDEALLQEAESTITKLNRDLDQW-----ELQQLLSGPYDAEGAVLTISAGAGGTD 55

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L RMY R+     +KV +   S+ D+ G K     I+GR  +  ++ E G HR
Sbjct: 56  AQDWAFMLMRMYTRWGEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRSEMGTHR 115

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+    A+G+  TS A V V+P+      ++IP +D+ I T R+ G GGQ+VN  ++A
Sbjct: 116 LVRISPFNANGKRQTSFAGVEVMPQIDNSVQLEIPDKDLEITTTRSGGKGGQNVNKVETA 175

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           VRI HIPTG+ V  + E+SQ QN+ +A+  L+A+L  + +++ A E +  R   +     
Sbjct: 176 VRIVHIPTGLAVRCTEERSQLQNKEKALNRLKAKLLVIAKEQRAQEIAEIRGDMVE-ASW 234

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
             +IR Y F   + + D R N     +  V+ G +D  I   L    
Sbjct: 235 GNQIRNYVFHPYQMVKDLRTNTETTAIGDVMNGELDPFIQAYLRQEN 281


>gi|160885362|ref|ZP_02066365.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483]
 gi|237716574|ref|ZP_04547055.1| peptide chain release factor RF-2 [Bacteroides sp. D1]
 gi|237720319|ref|ZP_04550800.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4]
 gi|260172304|ref|ZP_05758716.1| peptide chain release factor RF-2 [Bacteroides sp. D2]
 gi|262405351|ref|ZP_06081901.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|293370547|ref|ZP_06617099.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC
           3f]
 gi|294644599|ref|ZP_06722352.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC
           2a]
 gi|294810341|ref|ZP_06769002.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens
           SD CC 1b]
 gi|315920609|ref|ZP_07916849.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108984|gb|EDO10729.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483]
 gi|229442557|gb|EEO48348.1| peptide chain release factor RF-2 [Bacteroides sp. D1]
 gi|229450070|gb|EEO55861.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4]
 gi|262356226|gb|EEZ05316.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292634281|gb|EFF52818.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC
           3f]
 gi|292640036|gb|EFF58301.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC
           2a]
 gi|294442449|gb|EFG11255.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens
           SD CC 1b]
 gi|295086344|emb|CBK67867.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           xylanisolvens XB1A]
 gi|313694484|gb|EFS31319.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 319

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 89/320 (27%), Positives = 142/320 (44%), Gaps = 19/320 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I  Y++ K    +L      +  +    +          + +  LE +  
Sbjct: 1   MKLVKDLQKWIEGYNELKTLADELELAFDFYKEELVTEEDVDAAYAKASEAVEALELKNM 60

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
                   D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ 
Sbjct: 61  LRDEADQMD----CVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K     I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I
Sbjct: 117 GIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLR 268
              +I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 LPANISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTA 346
            +  V+ G ID  I   L  
Sbjct: 294 DVNGVMDGKIDGFIKAYLME 313


>gi|325283910|ref|YP_004256451.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP]
 gi|324315719|gb|ADY26834.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP]
          Length = 365

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 98/335 (29%), Positives = 162/335 (48%), Gaps = 18/335 (5%)

Query: 6   HKQICDLKN---------RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKK 56
            +++  L+          R  E++  +++    +   +        + +   +  Y   K
Sbjct: 5   QEKLASLREYLDIPGKERRLNELDHFLADPELWNDQNRARSITQEATSVRGVVEKYQGLK 64

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
            +   L  ++    S+ E   L + +    ++        +    L      D   I+ +
Sbjct: 65  SDLDGLAEMLELAESEDEREMLLEEQGGIEQRVDE-----LYRETLFTMKHADTPAIIRV 119

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           + G GG+EA  + G L RMY R+A  R ++V++L     D  GY+ I   I G   +  M
Sbjct: 120 KGGAGGTEAQDWAGMLARMYMRWAERRGYRVDILDEQPGDQAGYQSIEFIIRGEKAYGMM 179

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE--DIRIDTMRASGSGG 234
             E GVHR+ RV   +++ R  TS A+V V+PE  E ++DI +   D+R D  R+ GSGG
Sbjct: 180 SAEHGVHRLVRVSPFDSNNRRQTSFASVDVVPEVPEEEIDIHIPDSDLRRDVFRSQGSGG 239

Query: 235 QHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           Q VNTTDSAVR+TH+PTGI +     +SQ +N   A+++L+ RLYD+E ++   E  A R
Sbjct: 240 QGVNTTDSAVRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMRKREEEALAAR 299

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKL 328
             Q  S +   ++R+Y   +  I DHR  L  +  
Sbjct: 300 GQQ-SSVEWGSQMRSYVLDKQYIKDHRSGLMQHNP 333


>gi|325089543|gb|EGC42853.1| peptide chain release factor 1 [Ajellomyces capsulatus H88]
          Length = 438

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 117/384 (30%), Positives = 196/384 (51%), Gaps = 41/384 (10%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            + +  + +  R++E+       K+ +    ++   + +  +++  +   +L+ ++ D +
Sbjct: 51  SIADEHSTLTSRLAETFDP----KIVKRAGELATTATTLKEWEKANESISELNNLLEDPS 106

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DSE+R LA  ++ + +  +  L + +   L+P+    D  C+LE+R G GG EA +F  
Sbjct: 107 TDSELRSLALEDLRSAKASLAILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGIFAN 166

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGY-------KEIVATISGRGVFSRMKFESGVH 183
           +L RMY  + + R  +  +L     + G          E V  I   G +  ++ E+GVH
Sbjct: 167 ELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEAGVH 226

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAA---------------EIDVDIPLEDIRIDTMR 228
           RVQRVPATE  GR HTSA +V +LP                    D  I  +++ ++ MR
Sbjct: 227 RVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDPNSDYYIDPQEVNVEKMR 286

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           A G+GGQHVN T+SA+R+THIPTGI+V     +SQH+NR +A  +LRAR+    R+    
Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346

Query: 288 ERSANRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINP 342
           E    R+  +G      R ++IRTYNF Q R TDHR  LTL+ L  +++G   ++ I++ 
Sbjct: 347 EMVKLRRGVMGGVAKMGRGDKIRTYNFGQNRCTDHRSGLTLHNLGSIMEGGDGLEKIMDS 406

Query: 343 LLTA---------HQAKMIGSASE 357
           +               + +  A E
Sbjct: 407 VRGWLVDREVDDVFAEEQMKMAQE 430


>gi|240279273|gb|EER42778.1| peptide chain release factor 1 [Ajellomyces capsulatus H143]
          Length = 438

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 117/384 (30%), Positives = 196/384 (51%), Gaps = 41/384 (10%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            + +  + +  R++E+       K+ +    ++   + +  +++  +   +L+ ++ D +
Sbjct: 51  SIADEHSTLTSRLAETFDP----KIVKRAGELATTATTLKEWEKANESISELNNLLEDPS 106

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DSE+R LA  ++ + +  +  L + +   L+P+    D  C+LE+R G GG EA +F  
Sbjct: 107 TDSELRSLALEDLRSAKASLAILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGIFAN 166

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGY-------KEIVATISGRGVFSRMKFESGVH 183
           +L RMY  + + R  +  +L     + G          E V  I   G +  ++ E+GVH
Sbjct: 167 ELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEAGVH 226

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAA---------------EIDVDIPLEDIRIDTMR 228
           RVQRVPATE  GR HTSA +V +LP                    D  I  +++ ++ MR
Sbjct: 227 RVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDPNSDYYIDPQEVNVEKMR 286

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           A G+GGQHVN T+SA+R+THIPTGI+V     +SQH+NR +A  +LRAR+    R+    
Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346

Query: 288 ERSANRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINP 342
           E    R+  +G      R ++IRTYNF Q R TDHR  LTL+ L  +++G   ++ I++ 
Sbjct: 347 EMVKLRRGVMGGVAKMGRGDKIRTYNFGQNRCTDHRSGLTLHNLGSIMEGGDGLEKIMDS 406

Query: 343 LLTA---------HQAKMIGSASE 357
           +               + +  A E
Sbjct: 407 VRGWLVDREVDDVFAEEQMKMAQE 430


>gi|300087667|ref|YP_003758189.1| peptide chain release factor 2 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527400|gb|ADJ25868.1| peptide chain release factor 2 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 327

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 98/323 (30%), Positives = 161/323 (49%), Gaps = 11/323 (3%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +      +    ++ +   +  +   ++   +L  +  D   D E+      E  A+
Sbjct: 6   GFWEDSDNSQKVMRRLTGLKKTVEQWRSLERRLNELAEL--DALGDPEMAQDVDAETEAV 63

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
             E+  LE    + L      D+++ +L I AG GG E+  +   L  MY ++   R + 
Sbjct: 64  SDELDRLE----FELSYSGEYDERNALLSIHAGAGGVESQDWAEMLLAMYVKWGERRDYD 119

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
           VE+L +S  D+ G K + A   GR  +  ++ E GVHR+ R+   ++    HTS A V V
Sbjct: 120 VEILETSAGDEAGIKSVTAEFRGRYAYGNLRSEHGVHRLIRLSPFDSDHARHTSFALVEV 179

Query: 207 LPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
           +PE  E  +V+I  +DI+++  RASG+GGQ+V    SAVR+TH P+GI+V   +E+SQHQ
Sbjct: 180 MPEVEEDAEVEINPDDIKLEAFRASGAGGQNVQKVSSAVRLTHTPSGIVVTAQTERSQHQ 239

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINL 323
           NR  AM +LRARL   +      E++  +  +I S +   +IR+Y       + DHR  +
Sbjct: 240 NREVAMSLLRARLLQRKIAEQEAEKARLKGERI-SNEWGSQIRSYVLHPYKMVKDHRTGM 298

Query: 324 TLYKLEYVL-QGYIDDIINPLLT 345
                + VL +G I+  I   L 
Sbjct: 299 ETGNTQAVLEEGNIEMFIEAYLK 321


>gi|91215788|ref|ZP_01252758.1| putative peptide chain release factor [Psychroflexus torquis ATCC
           700755]
 gi|91186254|gb|EAS72627.1| putative peptide chain release factor [Psychroflexus torquis ATCC
           700755]
          Length = 316

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 89/316 (28%), Positives = 158/316 (50%), Gaps = 8/316 (2%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
             AI+     +  +D  KQ  +DL+ +           D  + +     + I +LE    
Sbjct: 1   MQAINDEKQWVKSFDFAKQLVEDLNVLFEFFEEGDVSEDEIKEKYAEALELIEDLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  +  D  + IL+I AG GG+E+  +   L RMY  +A  R +K+  L+    D  
Sbjct: 57  FKNMLSEESDPLTAILQITAGAGGTESCDWAEMLMRMYIMWADRRNFKIRELNHQGGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++DI
Sbjct: 117 GIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRAR 276
              +I+ +  R+ G+GGQ+VN  ++   +TH P+GI++  S  +SQ +NR +AM++L+++
Sbjct: 177 NPSEIKWEFARSGGAGGQNVNKVETKAILTHYPSGIVIHNSETRSQLENRQKAMQMLKSQ 236

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           LY++E K+    RS     +  S +   +IR Y     + + D R       ++ ++ G+
Sbjct: 237 LYEIELKKQQAARSEIE-SEKKSIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDDIMNGH 295

Query: 336 IDDIINPLLTAHQAKM 351
           ID  +   L +   K 
Sbjct: 296 IDSFLKSYLMSSGQKK 311


>gi|157828246|ref|YP_001494488.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932947|ref|YP_001649736.1| peptide chain release factor 2 [Rickettsia rickettsii str. Iowa]
 gi|157800727|gb|ABV75980.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908034|gb|ABY72330.1| bacterial peptide chain release factor 2 (RF-2) [Rickettsia
           rickettsii str. Iowa]
          Length = 285

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 93/287 (32%), Positives = 155/287 (54%), Gaps = 12/287 (4%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +  +D E     + ++  +     + E       L     D  +C LEI AG GG+E+
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFET----ECLFSGEADGNNCFLEINAGAGGTES 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   + RMY R+A    +K E+++  + ++ G K     I G+  +   K E+GVHR+
Sbjct: 57  HDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+    A+G+  TS A+  + PE  +   + I  +D+RIDT RASG+GGQHVNTTDSAV
Sbjct: 117 VRISPFNAAGKRMTSFASSWIYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHIPTG +    S++SQH+N+ +AMK+L+A+LY++E ++  +  +     K     G 
Sbjct: 177 RITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWG- 235

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y     + + D R +      + VL G +++ ++  L  +
Sbjct: 236 --HQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAMN 280


>gi|218259544|ref|ZP_03475251.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225027|gb|EEC97677.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii
           DSM 18315]
          Length = 322

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 19/328 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I +Y++     ++L              +          + +  LE    
Sbjct: 1   MKKVKELKKWIELYNEVHAAAEELQLAYDYVKEGIVSEEEVDEAYGNAIQLVESLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  + +   D  SC+L+I +G GG+E+  +   L RMY R+A    +K+ V +  + D+ 
Sbjct: 57  FRNMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K     I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V I
Sbjct: 117 GIKTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLR 268
               I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 DQAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMEEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            +  V+ G IDD I   L    A+    
Sbjct: 294 DVNGVMDGKIDDFIKAYLMEFGAEETAE 321


>gi|58579040|ref|YP_197252.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617098|ref|YP_196297.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Gardel]
 gi|58416710|emb|CAI27823.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417666|emb|CAI26870.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 251

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 90/250 (36%), Positives = 139/250 (55%), Gaps = 9/250 (3%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA-LRKWKVEVLSSSDNDDGGY 160
           +  D  D   C +EI++G GG+E+  +   L RMY R+A     +K +V+   D ++ G 
Sbjct: 1   MFSDEADQNDCFIEIQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGV 60

Query: 161 KEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPL 219
           K  +  + G   +   K ESG+HR+ R+    ++ + HT+ A+V V P      D+ I  
Sbjct: 61  KSAIIKVIGYNAYGWSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHD 120

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY 278
           +D+RIDT RASG+GGQHVN T+SAVRITHIP+GI+V   + +SQHQN   A  +LR+RLY
Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLY 180

Query: 279 DVERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
            ++ +    + +    ++  IG G+   +IR+Y     + + D R       +  VL G 
Sbjct: 181 QLKLQEKEKKMAQEHSQRCDIGWGN---QIRSYVMHPYQMVKDIRTGYETGNVNSVLDGD 237

Query: 336 IDDIINPLLT 345
           +D  I   LT
Sbjct: 238 LDAFIIATLT 247


>gi|188995108|ref|YP_001929360.1| putative peptide chain release factor RF-2 [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594788|dbj|BAG33763.1| putative peptide chain release factor RF-2 [Porphyromonas
           gingivalis ATCC 33277]
          Length = 319

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 87/327 (26%), Positives = 153/327 (46%), Gaps = 22/327 (6%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             +   +   I      D   +E +  +    +  S  E  D A    +        L  
Sbjct: 1   MRKVKELKSWIGYYDAIDTATEEVKLAYEYCKEGISTEEEVDEAYAHAIR-------LIE 53

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
           E+    + +  +D    +L++ AG GG+E+  +   L RMY+R+A  + ++V + +  D 
Sbjct: 54  EVELKNMLRSEEDHFGAVLKVNAGAGGTESQDWASMLVRMYQRWADKQGYQVTITNWQDG 113

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEID 214
           D+ G K +   + G   +  +K E+GVHR+ RV    A G+  TS A+V V+P     I+
Sbjct: 114 DEAGIKTVTMQVEGNLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIE 173

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQN 265
           ++I    I  DT R+ G+GGQ+VN  ++ VR+ +             ++  +  ++Q+ N
Sbjct: 174 IEINAAGISWDTFRSGGAGGQNVNKVETGVRLHYKYKDPETGEDKEIVIENTESRTQYDN 233

Query: 266 RLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINL 323
           R  AM++LR++LY++E +R     +     K +I  G    +IR+Y F   R+ DHR N 
Sbjct: 234 RENAMRLLRSQLYEMELQRRRAAEAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNY 290

Query: 324 TLYKLEYVLQGYIDDIINPLLTAHQAK 350
               +  V+ G ID+ I   L     +
Sbjct: 291 QTSNVNAVMDGDIDEFIKAYLMEFAGE 317


>gi|157825493|ref|YP_001493213.1| peptide chain release factor 2 [Rickettsia akari str. Hartford]
 gi|157799451|gb|ABV74705.1| peptide chain release factor 2 [Rickettsia akari str. Hartford]
          Length = 285

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 91/258 (35%), Positives = 145/258 (56%), Gaps = 4/258 (1%)

Query: 93  LENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSS 152
           L  +     L     D  +C LEI AG GG+E+  +   + RMY R+A    +K E+++ 
Sbjct: 24  LAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINM 83

Query: 153 SDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAA 211
            + ++ G K     I G+  +   K E+GVHR+ R+    A+G+  TS A+  V P    
Sbjct: 84  LNGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTSFASSWVYPAIDD 143

Query: 212 EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAM 270
            I + I  +D+RIDT RASG+GGQHVNTTDSAVRITHIPTG +    S++SQH+N+ +AM
Sbjct: 144 NIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAM 203

Query: 271 KVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
           K+L+A+LY++E ++  +  +     +  S     +IR+Y     + + D R +      +
Sbjct: 204 KMLQAKLYELEMQKRTDSVNEQNAAKTDS-SWGYQIRSYILHPYQMVKDLRTDYETSDTK 262

Query: 330 YVLQGYIDDIINPLLTAH 347
            VL G +++ ++  L  +
Sbjct: 263 GVLDGDLEEFVSANLAMN 280


>gi|149371331|ref|ZP_01890817.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49]
 gi|149355469|gb|EDM44028.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49]
          Length = 317

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 83/311 (26%), Positives = 151/311 (48%), Gaps = 8/311 (2%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +      ++ Y++     +D   +           +  +       + I  LE    
Sbjct: 1   MKVLRSKKKWVTDYEEATTLFEDAEVIYEFFKEGEAPAENVEERYKKAFEAIEALE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  +  D  S +L+I AG GG+E+  +   L RMY  +A    +KV+ L+    D  
Sbjct: 57  FRNMLSEEGDAMSAVLQITAGAGGTESCDWANMLMRMYLMWAERNGFKVKELNYQAGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++DI
Sbjct: 117 GIKTVTLEIDGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIDI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRAR 276
              DI  D  R+ G+GGQ+VN  ++   +TH P+GI++  S  +SQ +NR +AM++L+++
Sbjct: 177 NPADIGWDFARSGGAGGQNVNKVETKAILTHKPSGIVIHNSETRSQLENRQKAMQMLKSQ 236

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           LY++E ++   +R+     ++   +   +IR Y     + + D R N      + +L G+
Sbjct: 237 LYEIELRKQQAQRAEIEGNKMA-IEWGSQIRNYVLQPYKLVKDVRNNHESTNPDAILDGH 295

Query: 336 IDDIINPLLTA 346
           ID+ +   L  
Sbjct: 296 IDEFLKAYLMM 306


>gi|145220477|ref|YP_001131186.1| peptide chain release factor 2 [Prosthecochloris vibrioformis DSM
           265]
 gi|145206641|gb|ABP37684.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 300

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 99/301 (32%), Positives = 154/301 (51%), Gaps = 9/301 (2%)

Query: 50  SIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
             Y +   +       +     D    +    E+ A    I    + I +  +    DD+
Sbjct: 2   EGYRKMASDATSCREELTLA--DELGEESYAEELDASIAAIEAEMDAIEFRNMLSGKDDE 59

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
            + I+ I AG GG+EA  +   L+RMY R+A  + +K+        D  G K     I G
Sbjct: 60  GNAIITIHAGAGGTEAQDWAEMLYRMYMRWAERKGFKIYTDDYQAGDGAGIKTATLEIQG 119

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMR 228
              +  +K E+GVHR+ RV   +++ R HTS A+V   PEA    ++++  ED+ + T R
Sbjct: 120 PYAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFR 179

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           + G GGQ+VN  ++AVRI H+P+GI+V    E+SQ QNR RAMK+L A+LY  +R+    
Sbjct: 180 SGGKGGQNVNKVETAVRIKHVPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDA 239

Query: 288 ERSA--NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           ++     +K +I  G    +IR+Y     RI DHR N   + +E VL G IDD ++  L+
Sbjct: 240 KKREVEGKKKKIEWG---SQIRSYVLDDRRIKDHRTNHERFDIETVLDGDIDDFMHAYLS 296

Query: 346 A 346
            
Sbjct: 297 E 297


>gi|225559538|gb|EEH07820.1| peptide chain release factor 1 [Ajellomyces capsulatus G186AR]
          Length = 438

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 115/384 (29%), Positives = 193/384 (50%), Gaps = 41/384 (10%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            + +  + +  R++E+       +       ++   + +  +++  +   +L+ ++ D +
Sbjct: 51  SIADEHSTLTSRLAETFDPKTAKRAG----ELATTATTLKEWEKANESISELNNLLEDPS 106

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DSE+R LA  ++ + +  +  L + +   L+P+    D  C+LE+R G GG EA +F  
Sbjct: 107 TDSELRSLALEDLRSAKASLTILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGIFAN 166

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGY-------KEIVATISGRGVFSRMKFESGVH 183
           +L RMY  + + R  +  +L     + G          E V  I   G +  ++ E+GVH
Sbjct: 167 ELLRMYTMFCSNRSLRTTLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEAGVH 226

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEA---------------AEIDVDIPLEDIRIDTMR 228
           RVQRVP TE  GR HTSA +V +LP                    D  I  +++ ++ MR
Sbjct: 227 RVQRVPTTENKGRTHTSAVSVVILPSFSSNIGEGDSELNFDDPNSDYYIDPQEVNVEKMR 286

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           A G+GGQHVN T+SA+R+THIPTGI+V     +SQH+NR +A  +LRAR+    R+    
Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346

Query: 288 ERSANRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINP 342
           E    R+  +G      R ++IRTYNF Q R TDHR  LTL+ L  +++G   ++ I++ 
Sbjct: 347 EMVKLRRGVMGGVAKMGRGDKIRTYNFGQNRCTDHRSGLTLHNLGSIMEGGDGLEKIMDS 406

Query: 343 LLTA---------HQAKMIGSASE 357
           +               + +  A E
Sbjct: 407 VRGWLVDREVDDVFAEEQMKMAQE 430


>gi|156546340|ref|XP_001606563.1| PREDICTED: similar to ENSANGP00000017484 [Nasonia vitripennis]
          Length = 402

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 125/318 (39%), Positives = 184/318 (57%), Gaps = 16/318 (5%)

Query: 41  AISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYL 100
             + I   I    +  +E++D+  +  +    +E R                     + L
Sbjct: 90  ERTKIYENIKNLAELVEEDKDMKKLAEEEKLSNEAR------------LKEIDNELFSAL 137

Query: 101 LLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY 160
                 D+    ILEI AG GG EA LFV +L  MY ++ +   +  +++   ++  GG 
Sbjct: 138 AQSLSGDNFDEIILEITAGVGGQEAMLFVKNLLEMYIKHLSYLGYSYDIIEMDESPQGGC 197

Query: 161 KEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE 220
           +     ISG+  F +++ E+GVHRVQRVPATE SGR+HTS  +V VLP+  +I V+I  +
Sbjct: 198 RHASIMISGKESFEKLRHEAGVHRVQRVPATEKSGRIHTSVVSVGVLPQPNDIQVEIHAK 257

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RIDTMRASG+GGQHVNTT+SAVR+TH+PTG+ V   +++SQ +NR  AM  LRA++Y+
Sbjct: 258 DLRIDTMRASGAGGQHVNTTNSAVRVTHLPTGMSVECQTDRSQIRNRELAMAKLRAKMYE 317

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR-INLTLYKLEYVLQGY--I 336
            +  R     S  RK Q+G G+R E+IRTYNF+Q R+TDHR  N TL+ L+  L+G   +
Sbjct: 318 QKLARQLRSASEMRKQQMGMGERHEKIRTYNFNQDRVTDHRLSNGTLHNLKGFLEGGMAL 377

Query: 337 DDIINPLLTAHQAKMIGS 354
           D +   L    Q K++  
Sbjct: 378 DGLHERLSKDMQHKLLME 395


>gi|331242267|ref|XP_003333780.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312770|gb|EFP89361.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 416

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 124/337 (36%), Positives = 190/337 (56%), Gaps = 16/337 (4%)

Query: 34  KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIREL 93
           ++ ++  AI P+   +  YD+      +L T+      +              E+ +R +
Sbjct: 69  EIIKKQKAIQPLKLAVEKYDELSSLACELKTISEKDPDEDMREIAITELKTIEERALRTI 128

Query: 94  ENEINYLLL---PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVL 150
           E     L+    P+    D+S ++EI+ G GG EA+ F   L  +Y R A  ++W ++ +
Sbjct: 129 EQVKQGLIQVASPRPESYDQSALVEIKPGVGGVEASHFATLLMNLYTRLATRKRWHIKPV 188

Query: 151 SSSDNDDG----GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
           S      G    G +E V  I G+ V+  +++E+GVHRVQRVP  + +  +HTS A+V V
Sbjct: 189 SVEYMTSGQGQDGLREAVLEIEGQAVYGSLRWEAGVHRVQRVPVMQNTASIHTSTASVIV 248

Query: 207 LP------EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSE 259
           LP      E  E +     +DI+++TMR+ G+GGQHVN T+SAVR+THIPTG +V+    
Sbjct: 249 LPLNPSGSEENESEDLFDEKDIKLETMRSQGAGGQHVNKTESAVRLTHIPTGTVVSMQDS 308

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQHQNR RA  +LRARL D++ ++   E   +R  Q+ + +RSE+IRTYNF QGR+TDH
Sbjct: 309 RSQHQNRERAYMILRARLLDLKLRQKVIENRESRLSQVKNTNRSEKIRTYNFQQGRVTDH 368

Query: 320 RINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           RI LTL +L  ++ G   +D I + L    +A  I S
Sbjct: 369 RIGLTLPRLNDIIDGGETLDIIWDGLEKDEEANTIQS 405


>gi|302901381|ref|XP_003048424.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI
           77-13-4]
 gi|256729357|gb|EEU42711.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI
           77-13-4]
          Length = 412

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 111/367 (30%), Positives = 187/367 (50%), Gaps = 37/367 (10%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             + + + E++  ++ S       ++      +S +   +  +++ +    +L  ++ D 
Sbjct: 29  QSMTSEYDELQKTLNASFDSTKAKRVG----ELSRVAEALKAWEKSQASVAELTAMLNDP 84

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D+++  +A+ E+ +   ++  L   ++  L P+    D  C++E R G GG E   F 
Sbjct: 85  EQDADLVSIARDELESETGKLESLARNLSASLTPRHPFADFPCMIEFRPGPGGLEGRYFT 144

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGG----------YKEIVATISGRGVFSRMKFE 179
             LF+MY+     + ++  V+     D  G           +E V  I  +G F   + E
Sbjct: 145 DTLFKMYKALCMRKGYRHSVMKYEFADTAGDSSSSAGENPLQEAVLEIQDQGAFDLFRSE 204

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEA------------AEIDVDIPLEDIRIDTM 227
           +G+HRVQR+P+TE+ GRVHTSA  V VLP               E D  +  +D++I+ M
Sbjct: 205 AGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESGAGSVDFEDPESDFYVNPQDVKIEAM 264

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RA G+GGQHVN T+SA+R+TH+PTG  V+    +SQ +NR  A K++RAR+ D  R+   
Sbjct: 265 RARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNRDEAWKMMRARIADQRREARE 324

Query: 287 NERSANR-----KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDI 339
            E +  R     K QI    R ++IRTYN++Q R TDHR  + ++ L  VL+G   +D I
Sbjct: 325 EEAARLRNSVLSKTQI---TRGDKIRTYNYNQDRCTDHRAGIDVHDLPNVLEGGEKLDRI 381

Query: 340 INPLLTA 346
           ++     
Sbjct: 382 MDGAKDW 388


>gi|297291498|ref|XP_001095577.2| PREDICTED: mitochondrial translational release factor 1-like
           isoform 2 [Macaca mulatta]
          Length = 326

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 106/208 (50%), Positives = 140/208 (67%), Gaps = 3/208 (1%)

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           L  +    GG +   A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+
Sbjct: 113 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ 172

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLR 268
             EI++ I  +D+RIDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +NR  
Sbjct: 173 PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREL 232

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKL 328
           AMK LRA+LY +  ++ AN+    RK+QIGS  RSE+IRTYNF Q R+TDHRI+ TL+ L
Sbjct: 233 AMKKLRAKLYSMHLEKEANKTQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRISKTLHDL 292

Query: 329 EYVLQGY--IDDIINPLLTAHQAKMIGS 354
           E  +QG   +D+++  L      + +  
Sbjct: 293 ETFMQGDYLLDELVQSLKEYADYESLVE 320


>gi|294994856|ref|ZP_06800547.1| peptide chain release factor 1 [Mycobacterium tuberculosis 210]
          Length = 206

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 108/205 (52%), Positives = 136/205 (66%), Gaps = 7/205 (3%)

Query: 157 DGGYKEIVATISG-----RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA 211
            GGYK+    I+       GV+SRMKFE GVHRVQRVP TE+ GRVHTSAA V V PE  
Sbjct: 1   MGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPE 60

Query: 212 EI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRA 269
           E+  V I   D+RID  R+SG GGQ VNTTDSAVRITH+PTGI+V   +E+SQ QN+ RA
Sbjct: 61  EVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRA 120

Query: 270 MKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLE 329
           ++VL ARL  +  ++   + SA+R  QI + DRSERIRTYNF + RITDHRI    + L+
Sbjct: 121 LQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNFPENRITDHRIGYKSHNLD 180

Query: 330 YVLQGYIDDIINPLLTAHQAKMIGS 354
            VL G +D + + L  A +   +  
Sbjct: 181 QVLDGDLDALFDALSAADKQSRLRQ 205


>gi|332213669|ref|XP_003255947.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 3 [Nomascus leucogenys]
          Length = 344

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 130/314 (41%), Positives = 185/314 (58%), Gaps = 41/314 (13%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG G                                    GG +  
Sbjct: 121 SEETDENDLILEVTAGVG------------------------------------GGLRHA 144

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 204

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 264

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++
Sbjct: 265 EEETNKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINRTLHDLETFMQGDYLLDELV 324

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 325 QSLKEYADYESLVE 338


>gi|154490399|ref|ZP_02030660.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC
           43184]
 gi|154089010|gb|EDN88054.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC
           43184]
          Length = 322

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 19/328 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I +Y++     ++L              +          + +  LE    
Sbjct: 1   MKKVKELKKWIELYNEVHAAAEELQLAYDYVKEGIVSEEEVDEAYGNAIQLVESLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  + +   D  SC+L+I +G GG+E+  +   L RMY R+A    +K+ V +  + D+ 
Sbjct: 57  FRNMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K     I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V I
Sbjct: 117 GIKTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLR 268
               I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 DQAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMEEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            +  V+ G IDD I   L    A+    
Sbjct: 294 DVNGVMDGKIDDFIKAYLMEFGAEESAE 321


>gi|255023944|ref|ZP_05295930.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
          Length = 184

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 98/182 (53%), Positives = 137/182 (75%), Gaps = 1/182 (0%)

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           K+ +G HRVQRVP TE+ GR+HTS ATVA+LPEA E+++++  +DIR DT  ++G+GGQ 
Sbjct: 1   KYXNGAHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQS 60

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTT SAVR+THIPTGI+V+   E+SQ +N+ +AMKVLRAR+YD   +    E  ANRK 
Sbjct: 61  VNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKS 120

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
            +G+GDRSERIRTYN+ Q R+TDHRI LT+ KL+ +++G +D+II+ L+   Q   +   
Sbjct: 121 AVGTGDRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHL 180

Query: 356 SE 357
           ++
Sbjct: 181 ND 182


>gi|194387338|dbj|BAG60033.1| unnamed protein product [Homo sapiens]
          Length = 344

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 130/314 (41%), Positives = 185/314 (58%), Gaps = 41/314 (13%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG G                                    GG +  
Sbjct: 121 SEETDENDLILEVTAGVG------------------------------------GGLRHA 144

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 204

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 264

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++
Sbjct: 265 EEEINKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELV 324

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 325 QSLKEYADYESLVE 338


>gi|310796023|gb|EFQ31484.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
          Length = 397

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 118/378 (31%), Positives = 194/378 (51%), Gaps = 39/378 (10%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +      +   +          K       +S +++ +  ++Q      +L+ ++G  + 
Sbjct: 18  IATEHEALARSLESDYD----TKTARRLGELSSVVTALREWEQATSSVAELNGLLG--SK 71

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D E+RD+A  E+ +   ++  +   ++  L PKD      C+LEIR G GG E   F   
Sbjct: 72  DKELRDMAAEELESTRDQLAAVSRRLSASLTPKDPYAHMPCLLEIRPGPGGLEGRFFADT 131

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGG----------YKEIVATISGRGVFSRMKFESG 181
           LFRMY++Y + + ++ EV+     D  G           +E +  I   G +   + E+G
Sbjct: 132 LFRMYKQYCSRKGYRAEVIKYETADAAGDQSTAAGESPLQEAIVEIHDPGAYDLFRGEAG 191

Query: 182 VHRVQRVPATEASGRVHTSAATVAVL--------------PEAAEIDVDIPLEDIRIDTM 227
           +HRVQR+PATE +GRVHTSA  V VL               +  E D  I   +++I+TM
Sbjct: 192 MHRVQRIPATEKNGRVHTSAVAVWVLPSFQESGGEGGAQDMDNPESDFYIDPAEVKIETM 251

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RA G+GGQHVN T+SA+R+TH+PTG +V+    +SQ +NR  A K++R+R+  + R+   
Sbjct: 252 RARGAGGQHVNKTESAIRMTHVPTGTVVSMQDSRSQSRNREDAWKLMRSRVALIRREARE 311

Query: 287 NERSANRKLQIG--SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINP 342
              +  R   +      RS++IRTYN++Q R+TDHR  L +Y L+ V+ G   +D I++ 
Sbjct: 312 EAAAQLRDSVLSQHRISRSDKIRTYNYNQDRVTDHRAGLDVYNLDDVINGGESLDKIVDA 371

Query: 343 ----LLTAHQAKMIGSAS 356
               L++A  A M+    
Sbjct: 372 VRDWLVSADIAAMMADEE 389


>gi|114609865|ref|XP_001140693.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 4 [Pan troglodytes]
          Length = 344

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 131/314 (41%), Positives = 185/314 (58%), Gaps = 41/314 (13%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG G                                    GG +  
Sbjct: 121 SEETDENDLILEVTAGVG------------------------------------GGLRHA 144

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 204

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 264

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  +QG   +D+++
Sbjct: 265 EEETNKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELV 324

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 325 QSLKEYADYESLVE 338


>gi|305667119|ref|YP_003863406.1| peptide chain release factor 2 [Maribacter sp. HTCC2170]
 gi|88708053|gb|EAR00291.1| peptide chain release factor 2 [Maribacter sp. HTCC2170]
          Length = 313

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 83/311 (26%), Positives = 151/311 (48%), Gaps = 8/311 (2%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              I      +  ++  +    DL  ++          +    +       I +LE    
Sbjct: 1   MKFIQSKKHWVDDFNAAQTLVGDLEVLMEFLKEGEVSENEVNSQYSKATGLIEKLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  +  +  D+ + +L+I AG GG+E+  +   L RMY  ++    +KV+ L+  + D  
Sbjct: 57  FKNMLSEEGDELTAVLQITAGAGGTESCDWAAMLMRMYMMWSQKNGFKVKELNYQEGDVA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   + G   F  +K E+GVHR+ R+   +++ + HTS A+V V P     I++D+
Sbjct: 117 GIKTVTLEVEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIDV 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              DI I T R+SG+GGQ+VN  ++ V++ H P+GI +  S  +SQH NR  AMK+L+++
Sbjct: 177 NPADIEITTARSSGAGGQNVNKVETKVQLVHKPSGIQIQCSDSRSQHDNRATAMKMLKSQ 236

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGY 335
           LY++E ++    R      ++   +   +IR Y     + + D R +     ++ V+ G 
Sbjct: 237 LYEIELRKKMEAREEIESSKMK-IEWGSQIRNYVMHPYKLVKDVRTSEETGNVDAVMDGN 295

Query: 336 IDDIINPLLTA 346
           ID  +   L  
Sbjct: 296 IDQFLKAFLMM 306


>gi|226329845|ref|ZP_03805363.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198]
 gi|225200640|gb|EEG82994.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198]
          Length = 274

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 124/265 (46%), Positives = 183/265 (69%), Gaps = 9/265 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L+ R+ EI+  +SE+  +   + +  L++EY+ ++ + +  S + + + + +    
Sbjct: 8   KLEALQERYEEIQALLSEADVIASQERFRALSKEYSQLTDVTACFSQWRKVQDDIEAAEM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E++++AQ E+   +    +LE ++  LLLPKD DD+ +C LEIRAGTGG E
Sbjct: 68  ML----DDPEMKEMAQEELKEAQALNDDLEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W++EV+++++ + GGYKE++A + G G +  +KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRIEVMNANEGEHGGYKEVIAKVVGDGAYGVLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVP TE+ GR+HTSA TVAVL E  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSACTVAVLAEVPEAELPDISPSDLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRL 267
           +RITHIPTGI+V    E+SQH+   
Sbjct: 244 IRITHIPTGIVVECQDERSQHKKTK 268


>gi|317061399|ref|ZP_07925884.1| peptide chain release factor 2 [Fusobacterium sp. D12]
 gi|313687075|gb|EFS23910.1| peptide chain release factor 2 [Fusobacterium sp. D12]
          Length = 331

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 174/341 (51%), Gaps = 21/341 (6%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-----IGDHNSDSE 74
           E R  E    +     +    A++   + ++ +    +E ++   +      GD +S  E
Sbjct: 2   EARTMEEGFWNDKKSSSALIKAMNEEKALLASFQSLVEEIEEEEVLIEFVEAGDESSQVE 61

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
           + +  +  +  +E     L        L     D  + I+ I +G GG+EA  +   L+R
Sbjct: 62  LEEKHKQLLKDMESFSTGL--------LLDGEYDGNNAIVTIHSGAGGTEACDWADMLYR 113

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+   +K+K+E +     D  G K I   +SG   +  +K E G+HR+ R+   +A+
Sbjct: 114 MYTRWCHDKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDAN 173

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS A+V V+PE  E         DIRIDT RASG+GGQH+N TDSAVRITH PTGI
Sbjct: 174 KKRHTSFASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTGI 233

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYN 310
           +V    E+SQ  NR  AMK+L+++L ++E K+   E       + +IG G    +IR+Y 
Sbjct: 234 VVTCQKERSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWG---SQIRSYV 290

Query: 311 FSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           F     + DHR  + +  ++ V+ G +D+ +N  L  ++ K
Sbjct: 291 FQPYTMVKDHRTGVEVGNIKAVMDGDLDEFMNGYLRWNKRK 331


>gi|167752837|ref|ZP_02424964.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216]
 gi|167659906|gb|EDS04036.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216]
          Length = 315

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 87/314 (27%), Positives = 142/314 (45%), Gaps = 19/314 (6%)

Query: 45  IISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
           I + +  YD   +E +DL  +                +       I ELE       + +
Sbjct: 4   IKAWVEEYDAVVKEVEDLRLMPEFVKEGVVTEQELDEQYARAMHRIEELEL----RNMLR 59

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
             +D    I++I +G GG+EA  + G L RMY R+     +KV+VL     ++ G K   
Sbjct: 60  RDEDRMGAIMDINSGAGGTEALDWAGMLLRMYTRWGEAHGYKVKVLDYQAGEEVGVKSCT 119

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIR 223
               G   +  +K E+GVHR+ R+    A+ +  T+ A+V V P   +         DI 
Sbjct: 120 LEFEGEYAYGYLKSENGVHRMVRLSPFNANNKRQTTFASVFVSPAIDDTIEITVNPADIE 179

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLRAMKVLR 274
            DT R+SG+GGQ+VN  ++AVR+ +             ++     +SQ  NR  AM++L+
Sbjct: 180 WDTFRSSGAGGQNVNKVETAVRLRYHGKDADTGEPIEYLIENMETRSQLMNRENAMRILK 239

Query: 275 ARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           ++LY  E  +    + A    K +I  G    +IR+Y F   R+ DHR  +    +E V+
Sbjct: 240 SKLYQRELDKRMATQQALEATKKRIEWG---SQIRSYVFDDRRVKDHRTGVQTSDVEGVM 296

Query: 333 QGYIDDIINPLLTA 346
            G +D+ I   L  
Sbjct: 297 DGDLDEFIKAYLME 310


>gi|255641350|gb|ACU20952.1| unknown [Glycine max]
          Length = 230

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 105/226 (46%), Positives = 150/226 (66%), Gaps = 6/226 (2%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MYERY+    WK  ++SSS  + GGYK  V  I G  V+S++K+ESGVHRVQRVP TE  
Sbjct: 1   MYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQ 60

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI- 253
           GRVHTS ATVA++PEA E++V I  +DI + T R+ G+GGQ+VN  ++A+ + H PTGI 
Sbjct: 61  GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 120

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +  + E++Q +NR RA ++LRA+LY+++ +         RKLQ+G+G RSE+IRTYN+  
Sbjct: 121 IFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLRNQRKLQVGTGARSEKIRTYNYKD 180

Query: 314 GRITDHR--INLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            R+TDHR  IN     L   L G I+D +   +T  Q +++   +E
Sbjct: 181 NRVTDHRLKINYE---LTSFLDGDIEDAVQSCVTMEQKELLEELAE 223


>gi|150009345|ref|YP_001304088.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC
           8503]
 gi|262384740|ref|ZP_06077873.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B]
 gi|149937769|gb|ABR44466.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC
           8503]
 gi|262293721|gb|EEY81656.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B]
          Length = 322

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 89/328 (27%), Positives = 148/328 (45%), Gaps = 19/328 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I +Y +     ++L         +    +            + +LE    
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVKEEIITEEEVDAAYKKALHLLEDLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  + +D  D  SC+L+I +G GG+E+  +   L RMY+R+A    +K+ + +  + D+ 
Sbjct: 57  FRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +
Sbjct: 117 GIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKV 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLR 268
               I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 ETAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            +  V+ G IDD I   L     +    
Sbjct: 294 DVNGVMDGKIDDFIKAYLMEFAGEESAE 321


>gi|323249834|gb|EGA33733.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 281

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 136/277 (49%), Positives = 195/277 (70%), Gaps = 9/277 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           +RITH+PTGI+V    E+SQH+N+ +A+ VL AR++ 
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHA 280


>gi|6469929|gb|AAF13494.1|AF130466_1 peptide chain release factor 2 [Campylobacter jejuni]
          Length = 269

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 94/256 (36%), Positives = 155/256 (60%), Gaps = 6/256 (2%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
              +L    +D K+ I+ I  G GG+E+  +   L+RMY R+     +KVE L   + ++
Sbjct: 17  EISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEE 76

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVD 216
            G K++   + G   +  +K E+G+HR+ R    +++GR HTS ++V V PE   +I+++
Sbjct: 77  AGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIE 136

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           I  +DIRID  RASG+GGQHVN T+SAVRITH PTGI+V   +++SQH+N+  A K+L++
Sbjct: 137 IEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKS 196

Query: 276 RLYDVERKRMANERSANRKLQIGSGDRSERIRTYN-FSQGRITDHRINLTLYKLEYVLQG 334
           RLY++E  +  +  +   K +IG G    +IR+Y  F   ++ D+R      +++ +L G
Sbjct: 197 RLYELELMKQQDSANTGEKSEIGWG---HQIRSYVLFPYQQVKDNRSGEAFSQVDNILDG 253

Query: 335 YIDDIINPLLTAHQAK 350
            I  +I  +L A +A+
Sbjct: 254 DIKKMIEGVLIALKAE 269


>gi|302672683|ref|XP_003026029.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8]
 gi|300099709|gb|EFI91126.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8]
          Length = 251

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 114/249 (45%), Positives = 158/249 (63%), Gaps = 9/249 (3%)

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
           +LE++ G GG+E ALF  DL RMY RYAA   W++  ++ S+ + GG +E++  +     
Sbjct: 6   LLELKPGVGGAEGALFCVDLERMYTRYAAEHGWQLTPVNRSETESGGLREVLMEVRKG-- 63

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP----EAAEIDVDIPLEDIRIDTMR 228
             R  FESG HRVQR+PATE+SGRVHTS A+V VLP              +ED+RI+ MR
Sbjct: 64  KGRGDFESGAHRVQRIPATESSGRVHTSTASVLVLPLVEEGTPTTTPLFKMEDVRIEVMR 123

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           A G+GGQHVN T+SAVR+THIPTGI+V    E+SQH NR RA  VL +RL      + A 
Sbjct: 124 ARGAGGQHVNKTESAVRLTHIPTGIVVAMQDERSQHVNRRRAFTVLTSRLLAQRLVQEAE 183

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTA 346
           +R   R   +   DRS++IRTYN+ Q RITDHRI +++  LE V++G  ++ +I  L   
Sbjct: 184 DRRKRRNSLVSGVDRSDKIRTYNWPQSRITDHRIGMSV-NLEPVMEGHGLETLIRALAAD 242

Query: 347 HQAKMIGSA 355
           H+ +++   
Sbjct: 243 HEERLLEEM 251


>gi|164660096|ref|XP_001731171.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966]
 gi|159105071|gb|EDP43957.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966]
          Length = 395

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 121/391 (30%), Positives = 193/391 (49%), Gaps = 38/391 (9%)

Query: 3   FLSHKQICDLKNRFAEIELRMSE-SPSVDAYIK---LTEEYAAISPIISKISIYDQKKQE 58
             +  +  D+  + A     M E    ++        ++    +  +    S + ++ Q 
Sbjct: 1   MSTTIKASDVVEKLA--SAMMQERQQLMENAQASVVASQRIKDLEAVHKTWSAWREQLQC 58

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            QD   +         +    Q      ++     E     +L    +   K  I+E+R 
Sbjct: 59  VQDTQRLCETEKDKDMLEMAEQELSQMRDEADARHEALKQQILSNSRSIQSKGAIMELRQ 118

Query: 119 GTGGSEAALFVGDLFRMYERYAALR---------------KWKVEVLSSSDNDDGG---- 159
           G GG E+ LF+G++ RMY ++   R                W  ++LS++  D       
Sbjct: 119 GVGGQESCLFLGEMLRMYIKFCETRAQKAQDEDDPSMLGAGWSTDLLSATPVDVSATSGA 178

Query: 160 ---YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-- 214
              Y+E +  I G   F  ++FE+GVHRVQR+PAT+  G++ TS   + VLP  AE D  
Sbjct: 179 GDAYREAILQIHGPNAFEALRFEAGVHRVQRIPATQNLGKLQTSTMAIIVLPMQAENDVS 238

Query: 215 -VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKV 272
              +  +D+R++TMRA G+GGQHVN T+SAVR+TH P+GI V+    +SQHQNR++A  V
Sbjct: 239 KDIVDSKDVRVETMRARGAGGQHVNRTESAVRLTHDPSGITVSMQDSRSQHQNRVKAWDV 298

Query: 273 LRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           LRARL D+  ++ A+E  A R+ Q+ S +RSER+RTYNF Q R+TDHRI ++L  +   +
Sbjct: 299 LRARLLDIHLQKEASENRALRRSQVASAERSERVRTYNFPQDRVTDHRIGISLSDIHRFM 358

Query: 333 QGY------IDDIINPLLTAHQAKMIGSASE 357
            G       +  +I  L+       + +  E
Sbjct: 359 DGDDSSGTGLSYLIEELMAREDEIRLHALLE 389


>gi|72071048|ref|XP_793802.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Strongylocentrotus purpuratus]
 gi|115937039|ref|XP_001184371.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Strongylocentrotus purpuratus]
          Length = 298

 Score =  175 bits (444), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 117/258 (45%), Positives = 165/258 (63%), Gaps = 3/258 (1%)

Query: 100 LLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG 159
           LLLP +  DD   I+E  AG GG EA LF  D+F MY+R+AA R W   VL     D GG
Sbjct: 27  LLLPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRFAAYRGWTFSVLEYFTTDMGG 86

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +    ++SG   +  ++ E+GVHRVQRVP TE+ GR+HTS   +AVLP+  EID+ +  
Sbjct: 87  LRHASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLPQPKEIDLKLDP 146

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY 278
           +D+R++T +ASG+GGQHVNTTDSAVRITH+PTGI   +  E+SQH+NR  AM +L+ R+Y
Sbjct: 147 KDLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRFIAMTMLQTRIY 206

Query: 279 DVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--I 336
           +       +   + R  Q+G+G RSE+IRTYN+ Q RITDHR   T++ +   L G   +
Sbjct: 207 NRILADQTSSERSIRSSQVGTGGRSEKIRTYNYQQDRITDHRRGRTVHGVPEYLLGSELL 266

Query: 337 DDIINPLLTAHQAKMIGS 354
           D+++   +   Q + +  
Sbjct: 267 DEMVTSCVEGDQCQQVRE 284


>gi|291442144|ref|ZP_06581534.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291345039|gb|EFE71995.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 375

 Score =  175 bits (444), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 25  DLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRIDDLAVLFE 84

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+  + K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 85  MAEEEDDPDTRAEAEAELADVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 141 ADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       VDI   D+R+D  R+SG      ++ D  V
Sbjct: 201 VRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSCNPRDS-DFMV 259

Query: 245 RITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGIM +S  E+S+ +N++ AM VL+ARL    R+    +  A +    G     
Sbjct: 260 RITHLPTGIMASSDSERSRTRNKVTAMNVLKARLLGRRRQEEQAKMDALKDE--GGNPCG 317

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            ++R+Y     + + D R    +   E V  G ID  +   +   
Sbjct: 318 NQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWR 362


>gi|153809227|ref|ZP_01961895.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185]
 gi|149128203|gb|EDM19423.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185]
          Length = 319

 Score =  175 bits (444), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 19/320 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   IS Y++ K    +L      +  +    +          + +  LE +  
Sbjct: 1   MKLVKDLQKWISGYNEVKTLADELELAFDFYKEELVTEEDVDAAYAKASEAVEALELKNM 60

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
                   D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ 
Sbjct: 61  LRDEADQMD----CVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K     I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I
Sbjct: 117 GIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLR 268
               I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 ETARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K++I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKMKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTA 346
            +  V+ G ID  I   L  
Sbjct: 294 DVNGVMDGKIDGFIKAYLME 313


>gi|239933740|ref|ZP_04690693.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 359

 Score =  175 bits (443), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 12/345 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-- 65
            +  ++   A +E + +     D   +  +  + +S + +++   +  +    DL  +  
Sbjct: 9   DLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRIDDLAVLFE 68

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + +   D + R  A+ E+  + K + E+E       L     D +  ++ IRA  GG +A
Sbjct: 69  MAEEEDDPDTRAEAEAELADVRKALDEMEV----RTLLSGEYDAREALVNIRAEAGGVDA 124

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY R+A    +K E+  +S  ++ G K     +     +  +  E G HR+
Sbjct: 125 ADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRL 184

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +  GR  TS A V VLP       VDI   D+R+D  R+SG      ++ D  V
Sbjct: 185 VRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSCNPRDS-DFMV 243

Query: 245 RITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGIM +S  E+S+ +N++ AM VL+ARL    R+    +  A +    G     
Sbjct: 244 RITHLPTGIMASSDSERSRTRNKVTAMNVLKARLLGRRRQEEQAKMDALKDE--GGNPCG 301

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            ++R+Y     + + D R    +   E V  G ID  +   +   
Sbjct: 302 NQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWR 346


>gi|256842350|ref|ZP_05547853.1| peptide chain release factor RF-2 [Parabacteroides sp. D13]
 gi|256735957|gb|EEU49288.1| peptide chain release factor RF-2 [Parabacteroides sp. D13]
          Length = 322

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 89/324 (27%), Positives = 148/324 (45%), Gaps = 19/324 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I +Y +     ++L         +    +            + +LE    
Sbjct: 1   MKKVKELKKWIELYSEVHAAAEELELAYEYVKEEIITEEEVDAAYKKALHLLEDLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  + +D  D  SC+L+I +G GG+E+  +   L RMY+R+A    +K+ + +  + D+ 
Sbjct: 57  FRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +
Sbjct: 117 GIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKV 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLR 268
               I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 EAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAK 350
            +  V+ G IDD I   L     +
Sbjct: 294 DVNGVMDGKIDDFIKAYLMEFAGE 317


>gi|306840415|ref|ZP_07473178.1| peptide chain release factor 2 [Brucella sp. BO2]
 gi|306289615|gb|EFM60824.1| peptide chain release factor 2 [Brucella sp. BO2]
          Length = 292

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 104/287 (36%), Positives = 151/287 (52%), Gaps = 12/287 (4%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +G+   D  I + A+  +  ++ EI          +L     D     LE+ AG GG+E+
Sbjct: 1   MGEEEGDKSIVEDAEKTIRDLKDEID----RRQIDMLLSGEADANDTYLEVHAGAGGTES 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A     KVEV+   + ++ G K     + G   +  +K ESGVHR+
Sbjct: 57  QDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGMLKTESGVHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ R HTS A++ V P     I+V +   D+RIDT RASG+GGQHVNTTDSAV
Sbjct: 117 VRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQHVNTTDSAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           RITHI TGI+V   +E+SQH+NR +A  +LRARLY+ E K+      A    K  IG G 
Sbjct: 177 RITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANATKTDIGWG- 235

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
              +IR+Y     + + D R  +     + VL G +   +   L   
Sbjct: 236 --HQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 280


>gi|328794147|ref|XP_003252002.1| PREDICTED: peptide chain release factor 2-like, partial [Apis
           mellifera]
          Length = 276

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 92/257 (35%), Positives = 142/257 (55%), Gaps = 8/257 (3%)

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
           +     LL     D  + ++EI  G GG+EA  +   L RMY+RYA +  +K E+ +   
Sbjct: 15  HNYELDLLLSGKYDSHNALIEIHPGAGGTEAMDWGQMLLRMYQRYADICGFKFEINNYEP 74

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            ++ G K + A + G+  +  MK E+GVHR+ R+   +++ R HTS A+V V+PE  +  
Sbjct: 75  GEEAGLKSVSAKVCGKNAYGLMKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDDSI 134

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKV 272
            VDI  +D+RID  R+SG+GGQH+N T SAVRITH+PTG +  + +++SQ QNR  AM  
Sbjct: 135 KVDINPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGFVTTSQAQRSQLQNRETAMNE 194

Query: 273 LRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLE 329
           LRA+L+ +E ++    + A +  Q  IG G    +IR+Y F     + D R         
Sbjct: 195 LRAKLFHLEEEKKRQHKQALKGDQKEIGWG---SQIRSYVFHPYNLVKDLRTGYETSDTS 251

Query: 330 YVLQGYIDDIINPLLTA 346
            V+ G +   +   L  
Sbjct: 252 GVMDGKLQPFVYSYLQW 268


>gi|32423703|gb|AAP81246.1| peptide chain release factor [Candidatus Portiera aleyrodidarum]
          Length = 297

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 95/247 (38%), Positives = 135/247 (54%), Gaps = 4/247 (1%)

Query: 103 PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
                D  +  +EI+AG+GG E+  +   L RMY R+A    +K E ++ +  D  G K 
Sbjct: 50  FSGDFDKNNAYVEIKAGSGGVESQDWANMLLRMYSRWAVTHDFKTETVNLNIGDLLGVKS 109

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE--AAEIDVDIPLE 220
               I G   F  M+ E G+HR+ R    ++S R HTS  +V V PE      ++ I   
Sbjct: 110 ATLHIKGDYAFGWMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPEITMKVHNIKINTN 169

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           ++RIDT R+SG+GGQHVNTTDSAVRITH+PT I+V   SE+SQH N+ RA+ +L+ +LYD
Sbjct: 170 ELRIDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYD 229

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
            ++K+   ER    K + G      +IR+Y     RI D R  +     E VL G +D  
Sbjct: 230 FDKKKGEVERINIEKKKAG-ICWGNQIRSYVLDAQRIKDLRTGVKNNNCEKVLNGELDLF 288

Query: 340 INPLLTA 346
           I   +  
Sbjct: 289 IEASIKQ 295


>gi|322379487|ref|ZP_08053853.1| Peptide chain release factor RF-2 [Helicobacter suis HS1]
 gi|322380468|ref|ZP_08054667.1| peptide chain release factor 2 [Helicobacter suis HS5]
 gi|321147113|gb|EFX41814.1| peptide chain release factor 2 [Helicobacter suis HS5]
 gi|321148094|gb|EFX42628.1| Peptide chain release factor RF-2 [Helicobacter suis HS1]
          Length = 382

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 99/344 (28%), Positives = 174/344 (50%), Gaps = 16/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             LK +  +I     +           +  +E   I  ++          +E  +L  +I
Sbjct: 39  EGLKVQLEQITQEQVDPAFWQDKTLAAQKNQEKMRIERLLQTYEHTKHTLEEALELFELI 98

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +          A  ++     ++      +   ++  +  D    I+ I+ G GG+E+ 
Sbjct: 99  QED-------TQALTQLFEEAPKLAARVQSMEVSVMLANDQDSMDAIVSIQPGVGGTESQ 151

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L+RMY R+A  + +KVE+L   + ++ G K +   I G  V+  MK E+G+HR+ 
Sbjct: 152 DWASMLYRMYLRWAERKGFKVELLDYQEGEEAGIKGVAFVIRGVNVYGYMKNENGIHRLV 211

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R+    A+G+ HTS A+V V PE  +     I  +DIR+DT RASG+GGQHVN T+SA+R
Sbjct: 212 RMSPFNANGKRHTSFASVQVSPEVDDDINIVIEEKDIRVDTYRASGAGGQHVNKTESAIR 271

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH  TGI+V   +++SQH+N+  A+K+L+++LY++E  +   + +   K  IG G    
Sbjct: 272 ITHFATGIVVQCQNDRSQHKNKAMALKMLKSKLYELELCKQREQSNMEEKSDIGWG---H 328

Query: 305 RIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           +IR+Y  +   +I D R  +    +  +L G +D ++  +L + 
Sbjct: 329 QIRSYVLAPYQQIKDARSEIAYSNVGAILDGDLDTLMEDVLVSR 372


>gi|322704975|gb|EFY96565.1| putative translation releasing factor RF-1 [Metarhizium anisopliae
           ARSEF 23]
          Length = 415

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 111/371 (29%), Positives = 183/371 (49%), Gaps = 36/371 (9%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   L      ++  ++         +       +  + + +S + Q     +DL  + 
Sbjct: 28  QRAKALSAEHEALQKSLNAQFDSQKARRAG----ELHRVAAALSAWQQSHSSIRDLQAMA 83

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D   D ++  +A+ E+ A E+++  LE  ++  L P+    D  C++E R G GG E  
Sbjct: 84  DDE-QDPDLAAIARDELQAEEEKLASLEKNLSASLTPQHPFADMPCMIEFRPGPGGLEGR 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG----------YKEIVATISGRGVFSRM 176
            F   LF+MY+   A R ++  VL     D  G           +E +  I  +G +   
Sbjct: 143 YFTDSLFKMYKALCARRGYRANVLKYEMADAAGDQSSSAGENPVQEAILEIQDQGAYDLF 202

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI----------------DVDIPLE 220
           + E+G+HRVQR+P+TE+ GRVHTSA  V VLP   E                 D  +  +
Sbjct: 203 RSEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPEGGSSGGGGEADADDPESDFYVNPQ 262

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYD 279
           ++R++TMRA G+GGQHVN T+SA+R+TH+PTG  V+    +SQ +NR  A K+LR+R+  
Sbjct: 263 EVRVETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREDAWKLLRSRIAG 322

Query: 280 VERKRMANERSANRKLQIGSGD--RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-- 335
              +   +E +  R   +      R ++IRTYN++Q R TDHR  L ++ L  VL G   
Sbjct: 323 QRAELRMHEAARLRNSVLAQAQITRGDKIRTYNYNQDRCTDHRAGLDVHNLPDVLDGGET 382

Query: 336 IDDIINPLLTA 346
           +D +++     
Sbjct: 383 LDRVMDAAKEW 393


>gi|255016197|ref|ZP_05288323.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_7]
          Length = 322

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 89/324 (27%), Positives = 148/324 (45%), Gaps = 19/324 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I +Y +     ++L         +    +            + +LE    
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVKEEIITEEEVDAAYKKALHLLEDLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  + +D  D  SC+L+I +G GG+E+  +   L RMY+R+A    +K+ + +  + D+ 
Sbjct: 57  FRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +
Sbjct: 117 GIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKV 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLR 268
               I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 EAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAK 350
            +  V+ G IDD I   L     +
Sbjct: 294 DVNGVMDGKIDDFIKAYLMEFAGE 317


>gi|297679454|ref|XP_002817545.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           isoform 2 [Pongo abelii]
          Length = 344

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 130/314 (41%), Positives = 186/314 (59%), Gaps = 41/314 (13%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG G                                    GG ++ 
Sbjct: 121 SEETDENDLILEVTAGVG------------------------------------GGLRQA 144

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 204

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVER 282
           IDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  AM  LRA+LY +  
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 264

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDII 340
           +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ LE  ++G   +D+++
Sbjct: 265 EEETNKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMRGDYLLDELV 324

Query: 341 NPLLTAHQAKMIGS 354
             L      + +  
Sbjct: 325 QSLKEYADYESLVE 338


>gi|255692994|ref|ZP_05416669.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565]
 gi|260621306|gb|EEX44177.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565]
          Length = 319

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 89/320 (27%), Positives = 142/320 (44%), Gaps = 19/320 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I  Y++ K    +L      +  +    +          + +  LE +  
Sbjct: 1   MKLVKDLQKWIDGYNEVKTLADELELAFDFYKEELVTEEDVDTAYAKAREAVEALELKNM 60

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
                   D    C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ 
Sbjct: 61  LRDEADQMD----CVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K     I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V+I
Sbjct: 117 GIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNI 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLR 268
               I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 ETARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTA 346
            +  V+ G I+D I   L  
Sbjct: 294 DVNGVMDGKIEDFIKAYLME 313


>gi|298377870|ref|ZP_06987820.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19]
 gi|301312251|ref|ZP_07218168.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3]
 gi|298265316|gb|EFI06979.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19]
 gi|300829673|gb|EFK60326.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3]
          Length = 322

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 89/328 (27%), Positives = 148/328 (45%), Gaps = 19/328 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I +Y +     ++L         +    +            + +LE    
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVKEEIITEEEVDAAYKKALHLLEDLE---- 56

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
           +  + +D  D  SC+L+I +G GG+E+  +   L RMY+R+A    +K+ + +  + D+ 
Sbjct: 57  FRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDI 217
           G K +   I G   +  +K E+GVHR+ RV    A G+  TS A+V V P     I+V +
Sbjct: 117 GIKTVTIDIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKV 176

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHI---------PTGIMVTSSEKSQHQNRLR 268
               I  DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 EAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAKMIGS 354
            +  V+ G IDD I   L     +    
Sbjct: 294 DVNGVMDGKIDDFIKAYLMEFAGEESAE 321


>gi|300361282|ref|ZP_07057459.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03]
 gi|300353901|gb|EFJ69772.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03]
          Length = 270

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 98/257 (38%), Positives = 148/257 (57%), Gaps = 8/257 (3%)

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
           ++    LL  D  D  + ++EI  G GG+EA  +   L RMY+RYAA    K E+     
Sbjct: 9   HDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHDLKFEIEDYEP 68

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            ++ G K +   I G+  F  +K E+GVHR+ R+   +++ R HTS A+V V+PE  +  
Sbjct: 69  GEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDQSI 128

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           +VDI  +D+RID  R+SG+GGQH+N T SAVRITH+PTGI+  + +++SQ QNR  AM +
Sbjct: 129 EVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRETAMNM 188

Query: 273 LRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLE 329
           LRA+L+ +E ++   +    +  Q  IG G    +IR+Y F     + DHR N     + 
Sbjct: 189 LRAKLFQLEEEKKKKQTEELKGNQKEIGFG---SQIRSYVFHPYNMVKDHRTNFETSDVN 245

Query: 330 YVLQGYIDDIINPLLTA 346
            V+ G +D+ I   L  
Sbjct: 246 GVMDGKLDNFIYAYLQW 262


>gi|255010031|ref|ZP_05282157.1| putative peptide chain release factor [Bacteroides fragilis 3_1_12]
          Length = 319

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 87/324 (26%), Positives = 141/324 (43%), Gaps = 19/324 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I  Y++ K    +L      +  +               + +  LE +  
Sbjct: 1   MKLVKGLQKWIDGYNEVKTLADELELAFDFYKDELVTEQEVDEAYAKALEHVENLELQNM 60

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
                +D  D  SC+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ 
Sbjct: 61  ----LRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATMANLQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIP 218
           G K     I G   +  +K E+GVHR+ RV    A G+  TS A+V V P   +      
Sbjct: 117 GIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNI 176

Query: 219 LEDI-RIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLR 268
           L      DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 LPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAK 350
            +  V+ G I+  I   L    ++
Sbjct: 294 DVNGVMDGKIEGFIKAYLMEFSSE 317


>gi|124024426|ref|YP_001018733.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964712|gb|ABM79468.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9303]
          Length = 319

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 87/314 (27%), Positives = 149/314 (47%), Gaps = 9/314 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
             +   +   + +I ++     + Q    +      D  + +         +   R    
Sbjct: 1   MRQLDEVKAQLVQIKLWRSAVNDAQATLELYDLEPDDEMLSEAQSGLQQLRQGLDRW--- 57

Query: 96  EINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN 155
                 L     D K  +L I AG GG++A  +   L RMY R+A     +V V   S+ 
Sbjct: 58  --ELERLLSGEYDKKGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDHDMRVTVDELSEG 115

Query: 156 DDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-D 214
           ++ G K     I GR  +  ++ E G HR+ R+    A+G+  TS A V ++P+  +  +
Sbjct: 116 EEAGIKSATVEIEGRYAYGYLRNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVE 175

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           +DIP +D+ + T R+ G+GGQ+VN  ++AVRI HIPTG+ V  + E+SQ QN+ +A+ +L
Sbjct: 176 LDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALL 235

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVL 332
           +A+L  + +++ A E +  R   I       +IR Y F   + + D R       ++ V+
Sbjct: 236 KAKLMVIAQEQRAAEIADIR-GDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVM 294

Query: 333 QGYIDDIINPLLTA 346
            G +D  I  LL  
Sbjct: 295 NGELDRFIQTLLRQ 308


>gi|289812362|ref|ZP_06542991.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 288

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 131/264 (49%), Positives = 186/264 (70%), Gaps = 9/264 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 29  KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 88

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 89  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 144

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 145 AALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 204

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  E +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 205 VQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 264

Query: 244 VRITHIPTGIMV-TSSEKSQHQNR 266
           +RITH+PTGI+V    E+SQH+N+
Sbjct: 265 IRITHLPTGIVVECQDERSQHKNK 288


>gi|256079594|ref|XP_002576071.1| peptide chain release factor [Schistosoma mansoni]
 gi|238661330|emb|CAZ32306.1| peptide chain release factor, putative [Schistosoma mansoni]
          Length = 1202

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 188/350 (53%), Gaps = 27/350 (7%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD- 68
            ++ + +  +   M+        + L+E +  + PI+  I   D   + ++++  ++ D 
Sbjct: 47  KNIISEYENVTKLMTSGAKECDLLPLSECWKNLRPIVDVIEELDILLEADKEVDQLVTDI 106

Query: 69  -----HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP-KDTDDDKSCILEIRAGTGG 122
                 +  ++++ +A++E      +   LE ++  LLLP  + D + + I+E+ AG GG
Sbjct: 107 VGTDTEDDVNDLKAIAELERKQRNVQREALEKKLLSLLLPIDERDLNSAVIMELFAGAGG 166

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDN-------------------DDGGYKEI 163
            EA LF  DL  MY  +A  + W   VL  +                     +  G    
Sbjct: 167 KEAGLFAHDLMNMYHAFAVQQNWSFTVLHKTVMSNEECAPSHNETSLSYVRVEIEGEPTT 226

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A +   G + ++K+E+GVHRVQRVP T +  ++HTS   V++ P+  ++DVDIP  D++
Sbjct: 227 EAGVMSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTSTVAVSIQPKYEDVDVDIPDNDLK 286

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
            +  R +G GGQ+VN + SAVR+TH+PTGI++    E+ QH N++ A+ +L+ RL ++  
Sbjct: 287 WEFHRPTGPGGQNVNKSTSAVRLTHLPTGIVISCQRERYQHVNKILALDMLKERLREIHL 346

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           K  ++   + R+  +G+ DRSE+IRTYNF Q R+TDHR+N +   L   +
Sbjct: 347 KSQSHLIDSIRRSHLGNLDRSEKIRTYNFPQDRVTDHRLNHSWNNLYRFM 396


>gi|326335638|ref|ZP_08201825.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692404|gb|EGD34356.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 296

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 89/292 (30%), Positives = 155/292 (53%), Gaps = 12/292 (4%)

Query: 59  EQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            ++L  ++  +  ++   +  +         I  LE    +  +  D  D  S +L+I A
Sbjct: 2   LEELQVMLDFYKENAISAEEVEAFYAKTLTHIENLE----FRNMLSDEGDALSAVLQITA 57

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG+E+  +   L RMY  +A  + + V+ L+  + D  G K +   I G   F  +K 
Sbjct: 58  GAGGTESCDWASMLMRMYIMWANRQGFSVKELNYQEGDVAGVKTVTLEIDGEFAFGYLKG 117

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           E+GVHR+ R+   +++ + HTS A+V V P     I+++I   DI  +TMR+SG+GGQ+V
Sbjct: 118 ENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINPADISFETMRSSGAGGQNV 177

Query: 238 NTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--K 294
           N  ++AVR+ H PTGI++  S  +SQ  N+ +A+++L+++LY++E K+   +R      K
Sbjct: 178 NKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEMELKKRQAKRDEIEANK 237

Query: 295 LQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           ++I  G    +IR Y     + + D R N     ++ V+ G IDD +   L 
Sbjct: 238 MKIEWG---SQIRNYVMQPYKLVKDVRTNYETTNVDAVMNGEIDDFLKAYLM 286


>gi|212545056|ref|XP_002152682.1| mitochondrial translation release factor (RF-1), putative
           [Penicillium marneffei ATCC 18224]
 gi|210065651|gb|EEA19745.1| mitochondrial translation release factor (RF-1), putative
           [Penicillium marneffei ATCC 18224]
          Length = 421

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 113/372 (30%), Positives = 196/372 (52%), Gaps = 29/372 (7%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +     ++   + E+       K+ +    ++P+   +  +D+  +   +L+++I D  
Sbjct: 49  SIAKEHEKLRDVLGENFD----TKVAKRLGELAPVAQAVKDWDKTHETITELNSLISDPE 104

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DSE+R LA  ++   + ++  + +++   L+P+       C+LEIR G GG EA LF  
Sbjct: 105 TDSELRSLALEDLDQTQTQLPIVSDKLKSALIPRHPFAALPCLLEIRPGAGGDEAGLFAY 164

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV---ATISGRGVFSRMKFESGVHRVQR 187
           +L RMY+ + + +  +  ++     +      +      I   G +  ++ E GVHRVQR
Sbjct: 165 ELLRMYQNFCSRKGLRTSIVKQDMEEAISNDRLSEAVVEIETPGSYDILRTEIGVHRVQR 224

Query: 188 VPATEASGRVHTSAATVAVLPEAA--------------EIDVDIPLEDIRIDTMRASGSG 233
           VPATEA GR HTSA +V +LP                   D  +  ++++ + MRASG+G
Sbjct: 225 VPATEAKGRTHTSAVSVMILPNFPESGANEENLNFEDPNSDYYVNPQEVKSEKMRASGAG 284

Query: 234 GQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQHVN T+SA+R+THIPTG+ V+    +SQH NR +A ++LRA+L +  R+    E    
Sbjct: 285 GQHVNKTESAIRLTHIPTGLTVSMQDSRSQHANRKKAWQLLRAKLAERRREAREEEMVKL 344

Query: 293 RKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTA- 346
           R+  +G      R +++RTYNFSQ R TDHR  +T++ L+ VL G   ++ +++ + T  
Sbjct: 345 RRGAMGGVAKMGRGDKVRTYNFSQSRCTDHRSGITVHDLDSVLDGGHGLETVMDSVRTWL 404

Query: 347 -HQAKMIGSASE 357
             +   +    E
Sbjct: 405 VDRDVQMMMLEE 416


>gi|189183642|ref|YP_001937427.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180413|dbj|BAG40193.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 287

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 101/286 (35%), Positives = 147/286 (51%), Gaps = 8/286 (2%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I    +D E     + E   +++E ++L        L     D   C L+I AG GG+E+
Sbjct: 4   IAIKENDIEFIHNIEQEWKKLQEEAKKL----QVECLFTSDVDVNDCFLDINAGAGGTES 59

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   + RMY R+A    +K EV+   D ++ G K     I G   +   K ESGVHR+
Sbjct: 60  NDWASMMLRMYLRFAESMNFKTEVVYLLDGEEAGVKSASVKICGHNAYGWFKTESGVHRL 119

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R     A G+  TS A+  V P     I V I  +DIRIDT RASG+GGQHVNTTDSA+
Sbjct: 120 VRNSPFNALGKRMTSFASAWVYPVINDNIQVVIEDKDIRIDTYRASGAGGQHVNTTDSAI 179

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH PT I+V   +++SQH+N+  AM++L+A++Y++E+K+  NE   N           
Sbjct: 180 RITHFPTKIVVQCQNDRSQHKNKAEAMRMLKAKIYELEQKK-QNEIINNHNAAKTDNSWG 238

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
             IR+Y     + + D R N+     + VL G ++  I   L    
Sbjct: 239 YHIRSYVLQPYQLVKDLRTNVETSDTKRVLDGDLEKFIYASLIHQN 284


>gi|295698346|ref|YP_003603001.1| peptide chain release factor 2 [Candidatus Riesia pediculicola
           USDA]
 gi|291156977|gb|ADD79422.1| peptide chain release factor 2 [Candidatus Riesia pediculicola
           USDA]
          Length = 369

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 176/352 (50%), Gaps = 20/352 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLT------EEYAAISPIISKISIYDQKKQEEQDLH 63
            + K     +  ++S +       KL+      +  A     I KI    Q  +  + L 
Sbjct: 27  EEKKIELTTLRNKISSNEIW-RSKKLSSLIGLQKLVAIKEIEIEKIEKIKQYLENIEILI 85

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             + +   +  +++            +R +   +    L    +D   C +++++G+GG 
Sbjct: 86  ECLKEKRDEDFLKE-----TYRDLFNVRSMIENLKIFRLFSKENDFCDCYIDLQSGSGGI 140

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           ++  +   L +MY +++ L+ ++  VL++S  +  G K     I GR  +  ++ E+G+H
Sbjct: 141 DSQDWTSMLLKMYLKWSDLKNFRSYVLNTSYGEITGIKSSTIMIKGRYAYGWLRTETGIH 200

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE--DIRIDTMRASGSGGQHVNTTD 241
           R+ R    ++SGR HTS ++V V P   + D +I ++  D++ID+ ++SG+GGQH N T+
Sbjct: 201 RLVRKSPFDSSGRRHTSFSSVFVYPVLEDPDQEIRIQSSDLKIDSYKSSGAGGQHTNKTE 260

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIG 298
           SA+RITHIPTGI+    S +SQH+N+ +A+K L+ +LY++++K     +    N K  I 
Sbjct: 261 SAIRITHIPTGIVTQCQSNRSQHKNKEQALKQLKNKLYEIQKKEKQENQKVIENNKFDIA 320

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            G+   +IR+Y     R+ D R  +    +  VL+G ID  I   L   +  
Sbjct: 321 WGN---QIRSYILDHSRVKDLRTGIEERNVRSVLEGKIDKFIKANLILRKKD 369


>gi|171693921|ref|XP_001911885.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946909|emb|CAP73713.1| unnamed protein product [Podospora anserina S mat+]
          Length = 431

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 117/369 (31%), Positives = 192/369 (52%), Gaps = 33/369 (8%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           L     ++  +++++       K+ +    +  I      ++  K   ++L  ++   + 
Sbjct: 46  LTAEHDQLTAQLADNFD----EKIAKRAGEVHRIAEAFKKFEHAKASLRELEGLLK--SD 99

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D+E+R++AQ ++ A  +++ E    ++  L PK    D  C++E+  G GG+E   F   
Sbjct: 100 DAEMREMAQEDLAATNEQLAESSRNLSVALTPKHPFADMPCLIEVVPGPGGTEGRFFADS 159

Query: 132 LFRMYERYAALRKWKVEVLSS----SDNDDGG-----YKEIVATISGRGVFSRMKFESGV 182
           +F+MY+ Y A + ++ +V+      S  + GG      +E V  +   G ++  + E+G+
Sbjct: 160 VFKMYQAYCANKGFRTKVVQYLAADSTGEKGGDGETALQEAVLEVMEEGAYAHFRGEAGM 219

Query: 183 HRVQRVPATEASGRVHTSAATVAVLP-------------EAAEIDVDIPLEDIRIDTMRA 229
           HRVQRVPATE SGR HTSA  V VLP             +  E D  I   +++ + MRA
Sbjct: 220 HRVQRVPATEKSGRTHTSAVAVWVLPSFAENATASDGDWDNPESDFYIDPAEVKSEKMRA 279

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG+GGQHVN T+SA+R+THIPTGI V+    +SQH NR  A ++LR+R+    R+     
Sbjct: 280 SGAGGQHVNKTESAIRLTHIPTGITVSMQDSRSQHTNRADAWRLLRSRIAQKRREAREEA 339

Query: 289 RSANRKLQIGSGD--RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLL 344
             A R   + S    R ++IRTYN+ Q R TDHR  L ++ L  VL+G   +  +I+ + 
Sbjct: 340 ARALRSSVLSSAQLTRGDKIRTYNYGQDRCTDHRAGLDVHNLPDVLRGGDTLGKVIDAVH 399

Query: 345 TAHQAKMIG 353
                K I 
Sbjct: 400 GWLAEKDIQ 408


>gi|53711665|ref|YP_097657.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46]
 gi|60679910|ref|YP_210054.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
 gi|253564278|ref|ZP_04841735.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265765049|ref|ZP_06093324.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52214530|dbj|BAD47123.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46]
 gi|60491344|emb|CAH06092.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
 gi|251948054|gb|EES88336.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263254433|gb|EEZ25867.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301161435|emb|CBW20975.1| putative peptide chain release factor [Bacteroides fragilis 638R]
          Length = 319

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 87/324 (26%), Positives = 140/324 (43%), Gaps = 19/324 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I  Y+  K    +L      +  +               + +  LE +  
Sbjct: 1   MKLVKGLQKWIEGYNDVKTLTDELELAFDFYKDELVTEQEVDEAYAKALEHVENLELQNM 60

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
                +D  D  SC+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ 
Sbjct: 61  ----LRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATMANLQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIP 218
           G K     I G   +  +K E+GVHR+ RV    A G+  TS A+V V P   +      
Sbjct: 117 GIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNI 176

Query: 219 LEDI-RIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLR 268
           L      DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 LPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNFQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTAHQAK 350
            +  V+ G I+  I   L    ++
Sbjct: 294 DVNGVMDGKIEGFIKAYLMEFSSE 317


>gi|300868546|ref|ZP_07113164.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
 gi|300333459|emb|CBN58356.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
          Length = 291

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 9/289 (3%)

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++     +S +++          +  +          L     D    +L I AG GG+
Sbjct: 2   ELLELETDESLLQEAYTNLSQLSRELDQW-----ELQQLLSGPYDAGGAVLTINAGAGGT 56

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           +A  +   L RMY R+   + +KV +   S+ D+ G K     I GR  +  ++ E G H
Sbjct: 57  DAQDWAEMLLRMYTRWGERQGYKVHLAEISEGDEAGLKSATLEIVGRYAYGYLRSEKGTH 116

Query: 184 RVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           R+ R+    A+ +  TS A V V+P     +++DIP +D+ + T RA G GGQ+VN  ++
Sbjct: 117 RLVRISPFNANDKRQTSFAGVEVMPILDRSVELDIPEKDLEVTTSRAGGKGGQNVNKVET 176

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRI H+PTG+ V  + E+SQ QN+ +A+ +L+A+L  V R++ A E +  R   +    
Sbjct: 177 AVRIVHLPTGLAVRCTEERSQLQNKEKALVLLKAKLLVVAREQRAKEIAEIRGDMVE-AA 235

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
              +IR Y F   + + D R  +    +  V+ G ++  I   L     
Sbjct: 236 WGNQIRNYVFHPYQMVKDLRTGVETTAIADVMNGELEPFIQAYLRQENQ 284


>gi|169838345|ref|ZP_02871533.1| Protein chain release factor B [candidate division TM7 single-cell
           isolate TM7a]
          Length = 243

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 98/244 (40%), Positives = 145/244 (59%), Gaps = 4/244 (1%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
             + IL I +G GG+EA  +   L+RMY+R+A    +KVEVL S   ++ G K I   I 
Sbjct: 1   MNNAILTINSGAGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIK 60

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTM 227
           G   +  +K E GVHR+ R+   +++ R HTS A V V PE  +   +DI  ED+++DT 
Sbjct: 61  GNYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVKIDIRPEDLKVDTY 120

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RASG+GGQHVNTTDSAVRITHIPT  +V   +E+SQ +NR  AMK+L+++L+++E ++  
Sbjct: 121 RASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKRE 180

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            E +  +  +    +   +IR+Y F     + DHR       +E V+ G ID  IN  L 
Sbjct: 181 KEMAELKGTE-SKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLK 239

Query: 346 AHQA 349
             ++
Sbjct: 240 YAKS 243


>gi|29348961|ref|NP_812464.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340868|gb|AAO78658.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 319

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 19/320 (5%)

Query: 39  YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
              +  +   I  Y++ K    +L      +  +               + +  LE    
Sbjct: 1   MKLVKDLQKWIDGYNEVKTLADELELSFDFYKEELVTEGDVDAAYAKASEAVEALEL--- 57

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              + +D  D  +C+L+I +G GG+E+  +   L RMY RYA    +K  + +  + D+ 
Sbjct: 58  -KNMLRDEADQMACVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEA 116

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIP 218
           G K     I G   +  +K E+GVHR+ RV    A G+  TS A+V V P   +      
Sbjct: 117 GIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNI 176

Query: 219 LEDI-RIDTMRASGSGGQHVNTTDSAVRITHIPTG---------IMVTSSEKSQHQNRLR 268
           L      DT R+ G+GGQ+VN  +S VR+ +             ++  +  + Q +NR  
Sbjct: 177 LPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNREN 236

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           AM+ LR+ LYD E +    E++     K +I  G    +IR+Y F   R+ DHR N    
Sbjct: 237 AMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWG---SQIRSYVFDDRRVKDHRTNYQTS 293

Query: 327 KLEYVLQGYIDDIINPLLTA 346
            +  V+ G I++ I   L  
Sbjct: 294 DVNGVMDGKIEEFIKAYLME 313


>gi|257463869|ref|ZP_05628255.1| peptide chain release factor 2 [Fusobacterium sp. D12]
          Length = 326

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 106/336 (31%), Positives = 172/336 (51%), Gaps = 21/336 (6%)

Query: 25  ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV-----IGDHNSDSEIRDLA 79
           E    +     +    A++   + ++ +    +E ++   +      GD +S  E+ +  
Sbjct: 2   EEGFWNDKKSSSALIKAMNEEKALLASFQSLVEEIEEEEVLIEFVEAGDESSQVELEEKH 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +  +  +E     L        L     D  + I+ I +G GG+EA  +   L+RMY R+
Sbjct: 62  KQLLKDMESFSTGL--------LLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRW 113

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
              +K+K+E +     D  G K I   +SG   +  +K E G+HR+ R+   +A+ + HT
Sbjct: 114 CHDKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHT 173

Query: 200 SAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S A+V V+PE  E         DIRIDT RASG+GGQH+N TDSAVRITH PTGI+V   
Sbjct: 174 SFASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTGIVVTCQ 233

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG- 314
            E+SQ  NR  AMK+L+++L ++E K+   E       + +IG G    +IR+Y F    
Sbjct: 234 KERSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWG---SQIRSYVFQPYT 290

Query: 315 RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            + DHR  + +  ++ V+ G +D+ +N  L  ++ K
Sbjct: 291 MVKDHRTGVEVGNIKAVMDGDLDEFMNGYLRWNKRK 326


>gi|242814526|ref|XP_002486386.1| mitochondrial translation release factor (RF-1), putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218714725|gb|EED14148.1| mitochondrial translation release factor (RF-1), putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 427

 Score =  173 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 113/359 (31%), Positives = 192/359 (53%), Gaps = 27/359 (7%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +     ++   + E+       K+ +    ++P+   +  +D+  +   +L+++I D  
Sbjct: 50  SIAKEHEKLRGVLGENFD----TKVAKRMGELAPVAQAVKDWDKTHETITELNSLINDPE 105

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DSE+R LA  ++   + ++  +  ++   L+P+       C+LEIR G GG EA LF  
Sbjct: 106 TDSELRSLAIEDLEQTQTQLPIVSEKLKSALIPRHPFAALPCLLEIRPGAGGDEAGLFAY 165

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV---ATISGRGVFSRMKFESGVHRVQR 187
           +L RMY+ + + +  +  ++     +      +      I   G +  ++ E GVHRVQR
Sbjct: 166 ELLRMYQSFCSRKGLRTSIVKQDMEESTSNDRVTEAVVEIETPGSYDILRTEIGVHRVQR 225

Query: 188 VPATEASGRVHTSAATVAVLPEAA--------------EIDVDIPLEDIRIDTMRASGSG 233
           VPATEA GR HTSA +V +LP                   D  +  +++R + MRASG+G
Sbjct: 226 VPATEAKGRTHTSAVSVMILPSFPESGANEDNLNFEDPNSDYYVNPQEVRSEKMRASGAG 285

Query: 234 GQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQHVN T+SA+R+THIPTG+ V+    +SQH NR +A ++LRA+L +  R+    E    
Sbjct: 286 GQHVNKTESAIRLTHIPTGLTVSMQDSRSQHANRKKAWQLLRAKLAERRREAREEEMVKL 345

Query: 293 RKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTA 346
           R+  +G      R +++RTYNFSQ R TDHR  +T++ L+ VL G   ++ +++ + T 
Sbjct: 346 RRGAMGGVAKMGRGDKVRTYNFSQSRCTDHRSGITVHDLDSVLDGGHGLETVMDSVRTW 404


>gi|158317542|ref|YP_001510050.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
 gi|158112947|gb|ABW15144.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
          Length = 386

 Score =  173 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 94/330 (28%), Positives = 149/330 (45%), Gaps = 14/330 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  L+ R   +E   ++        +       +S +   I   +  ++   DL   + 
Sbjct: 44  DVEGLRRRAQALEQEAADPDLWSDQDRAQAVTRRLSAVKGDIGRVEGLRRRLDDLIAALD 103

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
             + D      A +  LA +       + +    L     D++  I+++ AG GG +AA 
Sbjct: 104 LGDDDLLTEAAADLPALARDI------STLEVRTLLSGEYDERDAIVQLSAGAGGVDAAD 157

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R+A    +  EV  +S+ ++ G K     +     +  ++ E GVHR+ R
Sbjct: 158 WTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKCPYAYGTLRSEHGVHRLVR 217

Query: 188 VPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   +   R  TS A V V P       VDI  +++RID  R+SG GGQ VNTTDSAVRI
Sbjct: 218 ISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQGVNTTDSAVRI 277

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL--QIGSGDRS 303
           TH+PT I+V   +E+SQ QN+  AM VL+A+L +  R   A E+         +  G   
Sbjct: 278 THLPTNIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGGPQDVSFG--- 334

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVL 332
            +IR Y     + + D R  +       VL
Sbjct: 335 SQIRNYVLHPYQMVKDLRTEVETSNTNAVL 364


>gi|153210408|ref|ZP_01947622.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177']
 gi|120575132|gb|EAX31756.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177']
          Length = 267

 Score =  173 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 119/263 (45%), Positives = 179/263 (68%), Gaps = 6/263 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R++EI   +S+S  ++    Y +L +EYA + PI+     + Q ++
Sbjct: 1   MKPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
             +    +  +   D E+R LA+ E+  +  +  ELE+++  LL+PKD +D+++  LEIR
Sbjct: 61  AIESAEEMQQEK--DPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG+EAA+F GDLFRMY RYA  + W+V ++S+ + + GG+KE++A + G GV+S++K
Sbjct: 119 AGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVA++PE  EID       ++RIDT RASG+GGQH
Sbjct: 179 FESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQH 238

Query: 237 VNTTDSAVRITHIPTGIMVTSSE 259
           VN TDSA+RITH+PTG++V   +
Sbjct: 239 VNRTDSAIRITHLPTGVVVECQD 261


>gi|189347853|ref|YP_001944382.1| peptide chain release factor 2 [Chlorobium limicola DSM 245]
 gi|189342000|gb|ACD91403.1| peptide chain release factor 2 [Chlorobium limicola DSM 245]
          Length = 249

 Score =  173 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 94/249 (37%), Positives = 140/249 (56%), Gaps = 7/249 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +    DD  + I+ I AG GG+EA  +   L+RMY R+A  + +KV      + D  G K
Sbjct: 1   MLSGKDDPGNAIITIHAGAGGTEAQDWAEILYRMYMRWAERKGFKVYTDDYQEGDGAGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                I G+  +  +K E+GVHR+ RV   +++ R HTS A+V   PEA    ++D+  E
Sbjct: 61  TATLEIQGQYAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKE 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+ + T R+ G GGQ+VN  ++AVRI HIP+GI+V    E+SQ QNR RAMK+L A+LY 
Sbjct: 121 DLELSTFRSGGKGGQNVNKVETAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQ 180

Query: 280 VERKRMANERSAN--RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
            +R+    ++     +K +I  G    +IR+Y     RI DHR N   + +E VL G +D
Sbjct: 181 RQREEEEAKKREIEGKKKKIEWG---SQIRSYVLDDRRIKDHRTNYERFDIETVLDGDLD 237

Query: 338 DIINPLLTA 346
             +   L+ 
Sbjct: 238 AFMEKYLSE 246


>gi|39961534|ref|XP_364694.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15]
 gi|145011042|gb|EDJ95698.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15]
          Length = 425

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 123/369 (33%), Positives = 190/369 (51%), Gaps = 36/369 (9%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +L +   ++   + E+       K  +    IS +   +  +D  +    +L  +    +
Sbjct: 36  NLTDEHDQLHTEL-EANF--DSTKA-KRMGEISKVADALKAWDAAQASINELTGLSK--S 89

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
            D E+R+LA+ E+     E+  L ++I   L PK    D  C++E R G GG E  LF  
Sbjct: 90  QDEEMRELAKEELETTNNELGTLSDKIKIALTPKHPFADMPCLIEFRPGPGGMEGRLFTD 149

Query: 131 DLFRMYERYAALRKWKVEVLSSSDND-------DGGYKEIVATISGRGVFSRMKFESGVH 183
            LF+MY+ Y   + ++ + ++    D       +   +E +  +   G +   + E+G+H
Sbjct: 150 ALFKMYQSYCTFKGYRTKTVTYERVDGPPGADGETPLQEAILEVINPGSYDIFRGEAGMH 209

Query: 184 RVQRVPATEASGRVHTSAATVAVLP----------------EAAEIDVDIPLEDIRIDTM 227
           RVQRVPATE SGR+HTSAA V VLP                     D  I   ++R++TM
Sbjct: 210 RVQRVPATEKSGRIHTSAAAVWVLPSFPEEAGASDEGTTDVNDPNSDFYIDPTEVRVETM 269

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RA G+GGQHVN T+SA+R+TH+PTG MV+   E+SQ +NR  A KVLR+R+   +R+   
Sbjct: 270 RARGAGGQHVNKTESAIRLTHMPTGTMVSMQDERSQQRNREAAWKVLRSRI-AQKRREQR 328

Query: 287 NERSANRKLQIGSGD---RSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIIN 341
            E + N +  + S D   R E+IRTYN+ Q R TDHR  L ++ L  V+ G   +D II 
Sbjct: 329 EEMAQNLRSSVLSKDKITRGEKIRTYNYVQKRCTDHRSGLDIHNLPGVMMGGPELDRIIA 388

Query: 342 PLLTAHQAK 350
            +     A+
Sbjct: 389 SVHEWQTAR 397


>gi|56203458|emb|CAI18897.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 231

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 106/208 (50%), Positives = 138/208 (66%), Gaps = 3/208 (1%)

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           L  +    GG +   A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+
Sbjct: 18  LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 77

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLR 268
             EI++ I  +D+RIDT RASG+GGQHVNTTDSAVRI H+PTG++     E+SQ +N+  
Sbjct: 78  PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKEL 137

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKL 328
           AM  LRA+LY +  +   N+R   RK+QIGS  RSE+IRTYNF Q R+TDHRIN TL+ L
Sbjct: 138 AMTKLRAKLYSMHLEEEINKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDL 197

Query: 329 EYVLQGY--IDDIINPLLTAHQAKMIGS 354
           E  +QG   +D+++  L      + +  
Sbjct: 198 ETFMQGDYLLDELVQSLKEYADYESLVE 225


>gi|296422823|ref|XP_002840958.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637185|emb|CAZ85149.1| unnamed protein product [Tuber melanosporum]
          Length = 309

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 118/306 (38%), Positives = 175/306 (57%), Gaps = 15/306 (4%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++ D N D E+R LA  ++ + E  +  L   I   L+        S ++EIR GTGGSE
Sbjct: 1   MLADRNLDPELRPLAVSDIASTESSLSALATTITQSLVQPHPFAHLSALVEIRPGTGGSE 60

Query: 125 AALFVGDLFRMYERYA-ALRKWKVEVLSSSDNDDGG--YKEIVATISGRGVFSRMKFESG 181
           A+LF GDL ++Y  Y   +R W + ++S +   +GG   +E +  +   G +   + E+G
Sbjct: 61  ASLFAGDLLKLYTMYCANIRNWPLSMVSLTAGAEGGDGVQEAIFEVEASGAYEIFRGEAG 120

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAA---------EIDVDIPLEDIRIDTMRASGS 232
           VHRVQRVPATE  GR HTS   V VLP            + D  I ++D+R+D MRA G+
Sbjct: 121 VHRVQRVPATEKQGRTHTSTVNVVVLPSFPEVQLGEGEEDPDSIIDMKDVRVDVMRARGA 180

Query: 233 GGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVNTTDSAVR+THIPTGI+      +SQH+NR +AM VL++R+ +  R     E  A
Sbjct: 181 GGQHVNTTDSAVRMTHIPTGIVAAIQDSRSQHKNRAKAMVVLKSRIAEKRRAEREAEELA 240

Query: 292 NRKLQIG-SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQA 349
            R+     +  RS+++RTYN+ Q R+TDHR   +L+ L   + G  +D +I+ +      
Sbjct: 241 LRRSVAKVNAGRSDKMRTYNYIQNRVTDHRCGFSLHDLPSFMNGETLDSMIDRVRKWQME 300

Query: 350 KMIGSA 355
           + + + 
Sbjct: 301 RDVENL 306


>gi|224003217|ref|XP_002291280.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973056|gb|EED91387.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 343

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 92/344 (26%), Positives = 157/344 (45%), Gaps = 22/344 (6%)

Query: 12  LKNRFAEIELRMSESPSVDAYIK-----LTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           +++R  ++E   S     DA        +T E    + +  ++  +++ + +      ++
Sbjct: 1   IQSRLQDLETETSSPSFWDASNSDRSEVVTREIGRYTRLKGEMEGWERLRGDALGALELL 60

Query: 67  GD-----------HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
            D              + E+  L   E  +  +++ E   +     L     D   C L+
Sbjct: 61  QDLLDGSSGGDNFEEDEDEMILLTFEECQSSAQKLLEQSQKYELQTLLSGPYDSAQCTLQ 120

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           + AG GG+EA  +V  L+RMY R+A    +KV VL  S  D  GYK +   + G   +  
Sbjct: 121 LTAGAGGTEACDWVSMLYRMYMRHAQFMDYKVTVLEESVGDVVGYKSVELLVEGVNAYGW 180

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAV---LPEAAEIDVDIPLEDIRIDTMRASGS 232
            K E G HR+ R+    A+ +  T+ A V V   L E    ++DIP +++ I TMR+ G 
Sbjct: 181 FKGEKGAHRLVRLSPFNANNKRQTTFAGVDVIPLLEEGTVSEIDIPEKELEITTMRSGGK 240

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQ+VN  ++ VR+ HIP+GI +  + E+SQ QN+  A+  L+ +L  + +++     +A
Sbjct: 241 GGQNVNKVETGVRVKHIPSGIAIKCTQERSQSQNKQIALTRLKGQLLVIAQEQQLQSINA 300

Query: 292 NRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQG 334
            R   I       +IR Y       + D R       +E VL G
Sbjct: 301 IR-GDIVEASWGAQIRNYVMQPYKMVKDARSGWETSDVEGVLDG 343


>gi|328773067|gb|EGF83104.1| hypothetical protein BATDEDRAFT_85755 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 367

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 95/350 (27%), Positives = 173/350 (49%), Gaps = 17/350 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSV----DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            K    ++++ +++  R+ +           I++ ++ + +   I++ S +  K  E Q 
Sbjct: 18  KKNWEVVESKASDLRDRLKDDNLWTTDTKEAIEIQKDISRLESEIAEHSKFTVKWNETQS 77

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +  +  +   D+ ++++         +++     +     L  D  D   C +EIRAG G
Sbjct: 78  MIELAKEEGDDTLLKEVVADM-----EDLEAQLRQYFIKSLMTDEVDQSGCYIEIRAGAG 132

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G+E+  +V  L RMYER+ A +   V  ++    D  G K     I G   +   K ESG
Sbjct: 133 GAESCDWVSMLTRMYERWGADQGHTVTSIAQVKGDVAGLKSSTTQIQGDYAYGWSKNESG 192

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLP-----EAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           VHR  RV   +++ + HTS  +V VLP       +   ++I   +++++ MRA G+GGQH
Sbjct: 193 VHRFVRVSPFDSNAKRHTSFVSVQVLPILSTSRLSTKTIEISTNELKLEFMRAQGAGGQH 252

Query: 237 VNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SAVR+THIPTG  +   SE+SQ QN+  A+++L+++LY VE  +++ ++  +   
Sbjct: 253 VNKTESAVRMTHIPTGITVFCQSERSQVQNKATALEMLKSKLYQVELDKLSRQKQEHHAN 312

Query: 296 QIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
             G       IR+Y     + + D R       ++ VL G + + +   L
Sbjct: 313 L-GENAWGNHIRSYVLQPYQLVKDTRTGTQTTNVQDVLNGGLQEFMESAL 361


>gi|198421557|ref|XP_002128173.1| PREDICTED: similar to mitochondrial translational release factor
           1-like [Ciona intestinalis]
          Length = 432

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 98/317 (30%), Positives = 169/317 (53%), Gaps = 10/317 (3%)

Query: 49  ISIYDQKKQEEQDLHTVIGDHNSDSEI-RDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
           +   +++  +  ++  +  +  SD E+ ++         ++      + +  L+  KD++
Sbjct: 110 VETLNERLHDLGEIEKLSKEFKSDEEMFKETEIERRSLEDEISEIKTSIVESLVTDKDSE 169

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D+   +LE+  G GG EAA+F  ++F MY+++     + ++V+     ++G   +  A +
Sbjct: 170 DNDGAVLEVTPGIGGVEAAMFATEIFDMYQKFCHRSGYDLDVVEYDMGENGALVKANAVV 229

Query: 168 S--GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRID 225
           S      +S  K E+G+HRVQRVP TE SGR+HTS  +VAVLP++ EI   +  +D++I 
Sbjct: 230 SSGDGYAYSLFKHEAGIHRVQRVPKTEKSGRLHTSTVSVAVLPKSNEILPPLQRKDLKIT 289

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
             ++SG GGQH N+T S   + HIPTG +V     + Q  N  RA + L   ++    K 
Sbjct: 290 FSKSSGHGGQHANSTLSCAVVCHIPTGNIVRVEETRCQKTNLDRAQQKLTHIVHSEAMKA 349

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY------IDD 338
              + ++ R+ Q  S +RS++IRTYNF   RITDHRI +TL  +E  L G       +  
Sbjct: 350 KQAQVNSVRRKQTRSRERSDKIRTYNFHHSRITDHRIGVTLSGIEEFLNGGAVFEKLLYK 409

Query: 339 IINPLLTAHQAKMIGSA 355
           +    L+  +A +I + 
Sbjct: 410 LEENSLSEERAAVIQAL 426


>gi|330802966|ref|XP_003289482.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum]
 gi|325080440|gb|EGC33996.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum]
          Length = 226

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 112/223 (50%), Positives = 154/223 (69%), Gaps = 3/223 (1%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY  Y   + WK E L S  ++ GG+++   +ISG+GVF  +K+ESGVHRVQRVP TE  
Sbjct: 1   MYRNYCEQKGWKFETLESQSSEVGGFRDCTISISGKGVFGFLKYESGVHRVQRVPDTETQ 60

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           GR+HTS  TVA+LPE  E+D+ I   DI++D  R+SG+GGQ VNTTDSAVR+TH+PTGI+
Sbjct: 61  GRIHTSTITVAILPEPKEVDLQIHDRDIKVDVFRSSGNGGQSVNTTDSAVRMTHLPTGIV 120

Query: 255 V-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           V    E+SQ QNR +A+K+LRAR+Y+ ER+R+ +ER   R  QIG+  RSERIRTYN+ Q
Sbjct: 121 VQMQDERSQLQNRAKALKILRARVYEQERQRLHSERERERNSQIGNATRSERIRTYNYPQ 180

Query: 314 GRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
            RITDHR+++    L   ++   ++  I+ +L   Q K +   
Sbjct: 181 DRITDHRVSIN-GNLSSCMEEEGLEGFIDEILIQFQTKELEEL 222


>gi|331657262|ref|ZP_08358224.1| peptide chain release factor 1 [Escherichia coli TA206]
 gi|331055510|gb|EGI27519.1| peptide chain release factor 1 [Escherichia coli TA206]
          Length = 323

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 126/290 (43%), Positives = 190/290 (65%), Gaps = 10/290 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           VQRVPATE+ GR+HTSA TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSA 243

Query: 244 VRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           +RITH+PTG+++  + ++   N    +K     +      +  N     R
Sbjct: 244 IRITHLPTGLLL--NVRTNVHNIKTKLKHFLYSVLASTLLKWQNGNRPKR 291


>gi|258566533|ref|XP_002584011.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237907712|gb|EEP82113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 412

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 194/381 (50%), Gaps = 41/381 (10%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            +    A +   ++    V    +  +    ++  +  +  +D+ ++   +L+ +  D +
Sbjct: 26  SIAEEHATLSRNLA----VSFETETAKRVGELTLAVQALKEWDKAQETIAELNVLREDSS 81

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D E+R+L   ++      +  L N++   L+P+    +  C++EIR G GG+EA+LF  
Sbjct: 82  TDHELRELVSEDLETAVSSLPTLSNKLKESLVPRHPFAEFPCLVEIRPGAGGAEASLFAS 141

Query: 131 DLFRMYERYAALRKWKVEVL---SSSDNDDGGYKE----IVATISGRGVFSRMKFESGVH 183
           +L RMY    + R ++  +L   +      GG ++     V  I     +   + E+GVH
Sbjct: 142 ELLRMYLAVCSRRGFRTTILKKDTEDGYGSGGSEDLLSEAVVEIETPRSYDIFRTEAGVH 201

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEID------------VDIPLEDIRIDTMRASG 231
           RVQR+PATEA GRVHTSA +V +LP   E +              I  ++++ + MRASG
Sbjct: 202 RVQRIPATEAKGRVHTSAVSVMILPSFPEQNDGALNFDDPNSDYYINPQEVQSEKMRASG 261

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQHVN T+SAVR+THIPTG +V     +SQH+NR +A ++LR+++  + R+    +  
Sbjct: 262 AGGQHVNKTESAVRLTHIPTGTVVAVQDTRSQHENRRKAWRLLRSKIAQMRREAREQQLV 321

Query: 291 ANRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY------------ 335
             R+  +G      R +++RTYNF Q R TDHR  +T++ L  VL+G             
Sbjct: 322 ELRRGIMGGVAKMGRGDKVRTYNFGQNRCTDHRSGMTIHNLSDVLEGGEGLSRIMESVSN 381

Query: 336 --IDDIINPLLTAHQAKMIGS 354
             +D  +  L    Q+K    
Sbjct: 382 WLVDQEVEALCAEEQSKQQKE 402


>gi|311086739|gb|ADP66820.1| peptide chain release factor 2 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 248

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 84/247 (34%), Positives = 142/247 (57%), Gaps = 7/247 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +    +D   C ++I++G+GG++A  +   L RMY R+A  + +  E++  S  +  G K
Sbjct: 1   MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   F   + E+G+HR+ R    ++  R HTS +++ + P+  E  D++I   
Sbjct: 61  SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITH+PT I+    + +SQH+N+ +AMK ++++LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           ++ ++   E+      K  I  G+   +IR+Y     +I D R  +    ++ VL G +D
Sbjct: 181 IQIRKKQEEKQKIEQNKSDITWGN---QIRSYILDNSKIKDLRTGVEKNHVQSVLDGDLD 237

Query: 338 DIINPLL 344
           D I   L
Sbjct: 238 DFIEQSL 244


>gi|319760398|ref|YP_004124336.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039112|gb|ADV33662.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 265

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 148/260 (56%), Gaps = 8/260 (3%)

Query: 92  ELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA-LRKWKVEVL 150
            + +++    +     D+ +C ++I++G+GG EA  +   L RMY ++    + + V+  
Sbjct: 4   YIFDKLEMYRMFFQEHDNCNCYVDIQSGSGGIEAQDWANMLLRMYLKWLDSKKGFYVKKT 63

Query: 151 SSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE- 209
           + +  +  G K     I G   +  +K ESGVHR+ R    ++ GR HTS A++ V PE 
Sbjct: 64  TETSGEFLGIKSATIKIIGPYAYGWLKTESGVHRLVRKSPFDSGGRRHTSFASIFVYPEL 123

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLR 268
              I ++I  ED+R+D  RASG+GGQHVN T+SAVR+THIPT ++    S++SQH+N+ +
Sbjct: 124 DDNITINIRPEDLRVDVYRASGAGGQHVNRTESAVRVTHIPTNVVTQCQSDRSQHKNKNQ 183

Query: 269 AMKVLRARLYDVERKR--MANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
           A+K L+A+LY++E ++     +   N+KL I  G    +IR+Y     RI D R  L   
Sbjct: 184 AIKQLKAKLYNLELQKKQYEKKIRENKKLDITWG---SQIRSYILDDSRIKDLRTGLEKR 240

Query: 327 KLEYVLQGYIDDIINPLLTA 346
            ++ VL G +DD +   +  
Sbjct: 241 NVKAVLNGDLDDFVTMSIKQ 260


>gi|311086167|gb|ADP66249.1| peptide chain release factor 2 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 248

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 84/247 (34%), Positives = 142/247 (57%), Gaps = 7/247 (2%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +    +D   C ++I++G+GG++A  +   L RMY R+A  + +  E++  S  +  G K
Sbjct: 1   MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLE 220
                +SG   F   + E+G+HR+ R    ++  R HTS +++ + P+  E  D++I   
Sbjct: 61  SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           D+RID  RASG+GGQHVN T+SAVRITH+PT I+    + +SQH+N+ +AMK ++++LY+
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180

Query: 280 VERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYID 337
           ++ ++   E+      K  I  G+   +IR+Y     +I D R  +    ++ VL G +D
Sbjct: 181 IQMRKKQEEKQKIEQNKSDITWGN---QIRSYILDNSKIKDLRTGVEKNHVQSVLDGDLD 237

Query: 338 DIINPLL 344
           D I   L
Sbjct: 238 DFIEQSL 244


>gi|116198067|ref|XP_001224845.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51]
 gi|88178468|gb|EAQ85936.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51]
          Length = 400

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 112/377 (29%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++   L     ++   +          +       +S + S +   ++ K    +L  ++
Sbjct: 13  ERARKLAIEHDQLSAALENDFDAKKAKRAG----ELSRVASAVKELEKAKAALVELQGLL 68

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
              ++D+E+R+LA+ ++ A   ++ E  + ++  L PK    D  C+LEIR G GG E  
Sbjct: 69  --ESNDAEMRELARDDLEATNAQLAESSHNLSVALTPKHPFADMPCLLEIRPGPGGLEGR 126

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV---------FSRMK 177
            F   LF+MY+ Y + + ++  ++    +D  G       I  +           +   +
Sbjct: 127 FFADSLFQMYKAYCSNKGYRTRIVQYEASDSDGSTGSEGEIPLQEAVLEVQEEGAYGLFR 186

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI--------------DVDIPLEDIR 223
            E+G+HRVQRVPATE SGR HTSA  V VLP   E               D  I   ++R
Sbjct: 187 GEAGMHRVQRVPATEKSGRTHTSAVAVWVLPSFPENGTSDSEADWDKPESDFYIDPNEVR 246

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVER 282
            +TMRA G+GGQHVN T+SA+R+THIPTG  V+    +SQ +NR  A ++LR+RL    R
Sbjct: 247 SETMRAGGAGGQHVNKTESAIRLTHIPTGTTVSMQDSRSQQRNREDAWRLLRSRLAQQRR 306

Query: 283 KRMANERSANRKL--QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDD 338
           +    +    R          R ++IRTY + Q R TDHR  L  + L  VL+G   ++ 
Sbjct: 307 EAREEQARQLRSSVLANSQITRGDKIRTYQYQQDRCTDHRSGLNTHNLPDVLRGGETLEK 366

Query: 339 IINPLLTAHQAKMIGSA 355
           +++ +      K I + 
Sbjct: 367 VMDSVQNWLVNKDIEAL 383


>gi|320592214|gb|EFX04653.1| mitochondrial translation release factor [Grosmannia clavigera
           kw1407]
          Length = 437

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 193/386 (50%), Gaps = 39/386 (10%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M  +  ++   L     +++  +             +    I  +   ++ +++ ++  +
Sbjct: 36  MPAVLLERARRLAAEHGQLQQSLETEYD----ATAAKRAGEIQGVAQALAEWEEAQRTAE 91

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L T+      D E+R LA+ E+ A E  +  +  ++   L PK    +  C+LE R G 
Sbjct: 92  ELRTMASAQEEDEELRKLAKDELEATEARLDGVAQQLTTTLTPKHPFGEMPCLLEFRPGP 151

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG---------YKEIVATISGRG 171
           GG E   F   LF MY+ Y   + ++  V+    +D  G          +E V  +   G
Sbjct: 152 GGLEGRFFTDSLFHMYQSYCTRQGYRARVIKYEVSDSLGETGADGESALQEAVLEVQEAG 211

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVL---------------PEAAEIDVD 216
            +   + E+G+HRVQR+PATE +GR HTSAA V VL                +  E D  
Sbjct: 212 AYDVFRGEAGIHRVQRIPATEKNGRTHTSAAAVWVLPSFPDSSGEGDSANDYDDPESDFY 271

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRA 275
           +   D+R++TMRA G+GGQHVN T+SA+R+TH+P+G +V+    +SQHQNR  A K+LRA
Sbjct: 272 VQPADVRVETMRARGAGGQHVNKTESAIRLTHVPSGTVVSMQDSRSQHQNRDSAWKILRA 331

Query: 276 RLYDVERKRMANERSANR-----KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEY 330
           R+    R++   E    R     K Q+    RS++IRTYN+SQ R+TDHR  L ++ L  
Sbjct: 332 RIAQRRREQREEEARRLRDAVLSKAQV---TRSDKIRTYNYSQDRVTDHRCGLDVHNLPD 388

Query: 331 VLQGY--IDDIINPLLTAHQAKMIGS 354
           VL G   +  I++ +    + + + +
Sbjct: 389 VLAGGDTLARIVSAVCAWQRDRDVEA 414


>gi|262277365|ref|ZP_06055158.1| peptide chain release factor 2 [alpha proteobacterium HIMB114]
 gi|262224468|gb|EEY74927.1| peptide chain release factor 2 [alpha proteobacterium HIMB114]
          Length = 248

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 93/242 (38%), Positives = 146/242 (60%), Gaps = 8/242 (3%)

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           D   C LE+ AG GG+E+  +   + +MY +++       E++S S  ++ G K     I
Sbjct: 6   DKFDCYLEVHAGAGGTESQDWADMIRKMYLKWSEKTDRSCELISESKGEEAGIKSSTIKI 65

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDT 226
            G   F  +K ESGVHR+ R+   +++ R HTS A+V V P    +I+++I  +D+R+DT
Sbjct: 66  GGLNSFGYLKNESGVHRLVRISPFDSNQRRHTSFASVWVYPVIDDKIEIEIKEKDLRVDT 125

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            R+SG+GGQHVNTTDSAVRITH+PT I+V   +E+SQH+N+  AMK+L++RLY++E K+ 
Sbjct: 126 YRSSGAGGQHVNTTDSAVRITHLPTKIVVQCQNERSQHKNKDTAMKMLKSRLYELELKKR 185

Query: 286 AN--ERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINP 342
               + + + K  IG G    +IR+Y     + + D+R N+     + VL G I + +  
Sbjct: 186 EESAQSAEDSKTDIGWG---HQIRSYVLQPYQLVKDNRTNVESTSPDDVLNGEIGEFLES 242

Query: 343 LL 344
            L
Sbjct: 243 AL 244


>gi|300175228|emb|CBK20539.2| unnamed protein product [Blastocystis hominis]
          Length = 299

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 119/299 (39%), Positives = 171/299 (57%), Gaps = 9/299 (3%)

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +  ++ +  +     +   +E   I        N+   + L    +D K+C +E+RAG G
Sbjct: 1   MREMLNEEYTHLLQEEEKVLEEANIISLP---SNKYCCITLFTPREDHKNCTIEVRAGAG 57

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G+EA LF  D+  MY+ Y +L+ WK  VLS +    GG KE +  I+G G F  ++ ESG
Sbjct: 58  GAEACLFTEDIMNMYKNYCSLKDWKWSVLSCNAPTGGGIKEAIIKITGEGSFGVLRTESG 117

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQRVP TE+ GR+HTS  TVAVLPE   ++  I   D+RID  R+SG GGQHVN T+
Sbjct: 118 VHRVQRVPETESQGRIHTSTMTVAVLPEVENMETLIRPSDLRIDLFRSSGKGGQHVNKTE 177

Query: 242 SAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL---QI 297
           SAVRITH+PTGI+V+   E++QH N+ +AM++L  RL + +      E  + R+      
Sbjct: 178 SAVRITHLPTGIVVSNQDERNQHMNKAKAMQILAIRLQNRQNSLFNEEIDSERRSYPFAF 237

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSA 355
               R E+ RTYN+   RITDHRI LTLY ++ ++ G  +D+    L      K   + 
Sbjct: 238 DWA-RCEKNRTYNYPNSRITDHRIGLTLYGMDKMMNGELLDEFAVALKQWRIEKEFEAL 295


>gi|312082910|ref|XP_003143641.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa]
 gi|307761198|gb|EFO20432.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa]
          Length = 384

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 8/346 (2%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           +  +   ++   +    ++    +T     +  + +    +  K     +L  ++ + N 
Sbjct: 28  ISAKLNALQKDGNNESRINDSASIT----HLETVTTLARRFYDKLGMLTELDMLLKEGND 83

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
               +           +    +    + ++   + D   +C LEI  G GG EA+LF  +
Sbjct: 84  AEIQKIAKLDSEQLTVELDSIVNELTDVVIPVTEYDSLNNCQLEIIPGVGGVEASLFASE 143

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L  MY  YA   KWK        +  GG +  V  + G G F  +++E+GVHRVQR P T
Sbjct: 144 LAEMYHNYAQFMKWKWTPYQVDASPSGGIRSAVVFVRGNGAFRALRYEAGVHRVQRFPVT 203

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           + + R+HTS + VAVLPE  +I+  +   D++++TMRASG GGQ+VN   +AVR+TH  T
Sbjct: 204 DKT-RMHTSTSVVAVLPEPEKIEACVTPADVKVETMRASGPGGQNVNQRSTAVRLTHRET 262

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           GI V    E++Q+ N   A K L A L   +      + S++RKLQ+G+  R+E++RTYN
Sbjct: 263 GIAVHCVDERTQYSNMEIAYKRLAAILLQRKLDETQKQYSSSRKLQVGTKARAEKVRTYN 322

Query: 311 FSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           F   ++ DHR+      +  V++G   +D II  L    +A+ +  
Sbjct: 323 FKDDQVIDHRLGKAWQGVANVMKGSSVLDQIIQSLDELSKAQHLKE 368


>gi|262340849|ref|YP_003283704.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272186|gb|ACY40094.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 365

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 86/351 (24%), Positives = 169/351 (48%), Gaps = 9/351 (2%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
                +I  +K    + + ++        Y K  +   ++  + + I  + + K   ++L
Sbjct: 17  MHDVLKIDQIKAILDKEQNQILNPNFWKDYKKSKDSIRSLHEMKTSIKDFMKLKNALEEL 76

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +           +  + E+     +  +L + I +  L  + +D  + IL+I +G GG
Sbjct: 77  EIIFSF-----SKEENLEKELEIQFHKTMKLLSNIEFKNLLSEKEDSLNAILQISSGAGG 131

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
           +E+  +   L RMY  +A    + V+ ++    D  G K +   I G   F  +K E+GV
Sbjct: 132 TESCDWTSMLMRMYFMWAEKHNFSVKKINFISGDITGIKSVTLEIDGIYAFGYLKGENGV 191

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ R+   +++ + HTS ++V V P   +  D+DI   DI+ +T R+SG+GGQ+VN  +
Sbjct: 192 HRLIRISPFDSNSKRHTSFSSVYVYPMINDNIDIDIKTSDIQWETFRSSGAGGQNVNKVE 251

Query: 242 SAVRITHIPTGIMVTS-SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           + VR+ H PTGI + +   +SQ QNR +A+ +L++RL+++E  +   ++   +  +    
Sbjct: 252 TGVRLRHHPTGITIENTESRSQMQNRQKALLLLKSRLFEIEMIKKNEKKEKIKSEKKKI- 310

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           +   +IR Y     + + D R      +++ V+ G ID  +   L   + K
Sbjct: 311 EWGSQIRNYIMHPYKLVKDLRTGYQTTQIQSVMDGEIDTFLKKFLMYKKNK 361


>gi|312891182|ref|ZP_07750704.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter
           paludis DSM 18603]
 gi|311296349|gb|EFQ73496.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter
           paludis DSM 18603]
          Length = 286

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 77/254 (30%), Positives = 132/254 (51%), Gaps = 8/254 (3%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
            +  +    +D  S +L+I AG GG+E+  +   L RMY  +A    +K+  +   + D 
Sbjct: 30  EFKNMLSAEEDQLSAVLQITAGAGGTESCDWASMLMRMYMMWAQKNGYKITEIDYQEGDV 89

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVD 216
            G K +     G   +  +K E+GVHR+ RV   +A+ + HTS A+V V P     I++D
Sbjct: 90  AGVKTVTLQFDGDFSYGYLKGENGVHRLVRVSPFDANAKRHTSFASVYVYPLVDDTINID 149

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRA 275
           +   DI  +T R+ G+GGQ+VN  ++AVR+ H P+GI++     +SQ QN+  A+++L++
Sbjct: 150 VNPADIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKS 209

Query: 276 RLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVL 332
           +LY+ E ++      A    K +I  G    +IR Y     + + D R +      + VL
Sbjct: 210 QLYEAEMRKRMEISDAIEGNKKKIEWG---SQIRNYVLHPYKLVKDLRTDYETSNAQAVL 266

Query: 333 QGYIDDIINPLLTA 346
            G +D+ +   L  
Sbjct: 267 DGELDEFLKAYLME 280


>gi|56755637|gb|AAW25997.1| SJCHGC05491 protein [Schistosoma japonicum]
          Length = 431

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 111/372 (29%), Positives = 193/372 (51%), Gaps = 31/372 (8%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD---- 68
            +++ +I   M+        + L+E +  + P++  I   D   + ++++  ++ D    
Sbjct: 50  ISKYEDISKLMTSGAGDCDLLSLSESWKKLRPLVDVIEELDILLEADKEVEQLVADIVGT 109

Query: 69  --HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP-KDTDDDKSCILEIRAGTGGSEA 125
              +  ++++ LA++E          LE ++  LLLP    D + + I+E+ AG GG EA
Sbjct: 110 DAEDDVNDLKALAELEHKQRNILREALEKKLLNLLLPVDQRDLESTVIMELFAGAGGKEA 169

Query: 126 ALFVGDLFRMYERYAALRKWKVEV-------------------LSSSDNDDGGYKEIVAT 166
            LF  DL  MY+  A  R W   +                   LS    +  G     + 
Sbjct: 170 GLFAHDLLIMYQALAIQRNWSFNIKQETVMSSEECTPSHNEKSLSYVRVEIQGEPTAESG 229

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDT 226
           I   G + ++K+E+GVHRVQRVP T +  ++HTS   V++ P   ++DVDI  +D++ + 
Sbjct: 230 ILSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTSTVAVSIQPNYGDVDVDISDDDLKWEF 289

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
            R +G GGQ++N + SAVR+TH+PTGI+V    E+ QH N+  A+ +L+ +L D++ K  
Sbjct: 290 HRPTGPGGQNLNKSTSAVRLTHLPTGIIVSCQRERHQHTNKKHALGMLKEKLRDIQLKSQ 349

Query: 286 ANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ---GYIDDIINP 342
            +   + R+  +G+ DRSE+IRTYNF Q RITDHR+  +   L   ++   G + ++I  
Sbjct: 350 LHLIDSIRQSHLGNLDRSEKIRTYNFPQDRITDHRLGNSWNNLHRFMKQAVG-LSELIES 408

Query: 343 LLTAHQAKMIGS 354
           L   +  + +  
Sbjct: 409 LYKQNLVEQLRQ 420


>gi|113475767|ref|YP_721828.1| peptide chain release factor 2 [Trichodesmium erythraeum IMS101]
 gi|110166815|gb|ABG51355.1| bacterial peptide chain release factor 2 (bRF-2) [Trichodesmium
           erythraeum IMS101]
          Length = 288

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 132/258 (51%), Gaps = 4/258 (1%)

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
           ++     L     D    ++ I AG GG++A  +   L RMY R+    K+KV++   S+
Sbjct: 25  DQWELQQLLSGLYDQNGAVVTINAGAGGTDAQDWAEMLLRMYTRWGEEHKYKVQLAEISE 84

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI- 213
            D+ G K     I GR  +  +K E G HR+ R+    A+G+  TS A V V+P      
Sbjct: 85  GDEAGLKSATLEIIGRYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEVMPILDHSV 144

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++DIP +D+ I T R+ G GGQ+VN  ++AVR+ HIPTG+ V  + E+SQ QN+ +A+ +
Sbjct: 145 ELDIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIPTGLSVRCTQERSQLQNKDKALAL 204

Query: 273 LRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYV 331
           L+ARL  + +++ A E +  R   +       +IR Y F   + + D R       +  V
Sbjct: 205 LKARLLIIAQEQRAQEINEIRGDMVE-AAWGNQIRNYVFHPYQMVKDLRTQKETTAINDV 263

Query: 332 LQGYIDDIINPLLTAHQA 349
           + G +D  I   L     
Sbjct: 264 MNGELDQFIEAYLRQENQ 281


>gi|227535953|ref|ZP_03966002.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300771659|ref|ZP_07081534.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|227244196|gb|EEI94211.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300761648|gb|EFK58469.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 283

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 78/254 (30%), Positives = 131/254 (51%), Gaps = 8/254 (3%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
            +  +    +D    IL+I AG GG+E+  +   L RMY  +      KV    S + D 
Sbjct: 30  EFKNMLSAEEDQLDAILQITAGAGGTESCDWAAMLMRMYIMWGEKHGCKVTEQDSQEGDV 89

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVD 216
            G K +    SG   +  +K E+GVHR+ R+   +++ + HTS A+V V P     I++D
Sbjct: 90  AGIKTVTLQFSGNFAYGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLIDDNIEID 149

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRA 275
           +   +I  DT R+ G+GGQ+VN  ++AVR+ H PTGI++     +SQ QN+  A+++L++
Sbjct: 150 VKDSEIEWDTFRSGGAGGQNVNKVETAVRLHHKPTGIIIKNQETRSQLQNKENALRLLKS 209

Query: 276 RLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVL 332
           +LY++E ++     +     K +I  G    +IR Y     + + D R ++     + VL
Sbjct: 210 QLYEIEMRKRQEATAVIEGSKKKIEWG---SQIRNYVLHPYKLVKDLRTSVETSNTQAVL 266

Query: 333 QGYIDDIINPLLTA 346
            G ID  +   L  
Sbjct: 267 DGDIDMFLKAYLME 280


>gi|25453244|sp|P59102|RF2_BUCAP RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 364

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 96/337 (28%), Positives = 182/337 (54%), Gaps = 15/337 (4%)

Query: 15  RFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           R  EI+L +S +           L +E   ++ II+KI+  ++  +E      +  +   
Sbjct: 32  RILEIDLELSSTEIWKKKEYVHNLNKEKNLLNIIINKINNIEKNIKEMIIFLDLAIETKD 91

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           ++ I+++++      EK        + +  +  +  D  +C ++++AG+GG +A  +   
Sbjct: 92  NAIIQEISEEIKKIAEKIQE-----LEFYRMFSNQHDHCNCYIDVQAGSGGVDAQDWSKI 146

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY +++  + +K E++  S  +  G K     +SG+  F  ++ E+G+HR+ R    
Sbjct: 147 LLRMYLKWSDKKGFKTEIIEESTGEIVGIKSSTIKVSGQYAFGWLRTETGIHRLIRKSPF 206

Query: 192 EASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           ++  R HTS +++ + P+  +  +++I   D+RID  RASG+GGQHVN T+SAVRITH+P
Sbjct: 207 DSGKRRHTSFSSIFIYPDIEDKINIEINPSDLRIDVYRASGAGGQHVNRTESAVRITHLP 266

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIR 307
           T I+    + +SQH+N+ +A+K ++++LY+++ K    ++    K    I  G+   +IR
Sbjct: 267 TNIVTQCQNNRSQHKNKEQAIKQMKSKLYEMKIKEKKEKQKKIEKNKSDISWGN---QIR 323

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           +Y     +I D R  +  Y ++ VL G +DD I   L
Sbjct: 324 SYILDNSKIKDLRTGVEKYNVQSVLDGDLDDFIEQSL 360


>gi|297304301|ref|XP_001086824.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like,
           partial [Macaca mulatta]
          Length = 346

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 101/210 (48%), Positives = 140/210 (66%), Gaps = 3/210 (1%)

Query: 148 EVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVL 207
           + L    ++ GG +   A+I G   +  MKFE GVHRVQRVP T+  GR+HTS  TVA+L
Sbjct: 131 QDLEYFPSEIGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTQKQGRIHTSTMTVAIL 190

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
           P+  EI++ I  +D+RIDT +ASG+GGQHVNTTDSAVRI H+PT ++     E+SQ +NR
Sbjct: 191 PQPTEINLVINPKDLRIDTKQASGAGGQHVNTTDSAVRIVHLPTSVVSKCQQERSQLKNR 250

Query: 267 LRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLY 326
             AM  LRA+LY +  ++  N+R   RK++IGS  RSE+IRTYNF Q R+TDHRI+ TL+
Sbjct: 251 ELAMTKLRAKLYSMHLEKETNKRQNARKIRIGSKGRSEKIRTYNFPQNRVTDHRISKTLH 310

Query: 327 KLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
            LE  +QG   +D+++  L      + +  
Sbjct: 311 DLETFMQGDDLLDELVQSLKEYADYESLVE 340


>gi|222100137|ref|YP_002534705.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
 gi|221572527|gb|ACM23339.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
          Length = 218

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 82/209 (39%), Positives = 125/209 (59%), Gaps = 4/209 (1%)

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
            R+A  + + VE++     ++ G K+    I G   +  +K ESGVHR+ R+   +A+ R
Sbjct: 1   MRWAERKGFDVEIVEYQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARR 60

Query: 197 VHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A+V V+PE  +   ++I  ED++I+T RASG GGQHVN T+SAVRITHIPTGI+V
Sbjct: 61  RHTSFASVNVIPEIEDDVHIEIKPEDLKIETFRASGHGGQHVNKTESAVRITHIPTGIVV 120

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
              +E+SQHQN+  A+K+L+ARLY +E ++   E     + ++       +IR+Y F   
Sbjct: 121 TCQNERSQHQNKQTALKILKARLYQLELEKKRKEIQEI-QGELKDISWGNQIRSYVFHPY 179

Query: 315 -RITDHRINLTLYKLEYVLQGYIDDIINP 342
             + DHR  +    ++ V+ G ID  I  
Sbjct: 180 TLVKDHRTGVETSNVDAVMDGDIDIFIEA 208


>gi|324506204|gb|ADY42656.1| Peptide chain release factor 1 [Ascaris suum]
          Length = 376

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 115/319 (36%), Positives = 184/319 (57%), Gaps = 6/319 (1%)

Query: 43  SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
             +++    +  ++ E   L+ ++    SD E+  +A+ E + +E E+ +L   I   ++
Sbjct: 51  QNLLTLSKEFIMRRDELLQLNALMS-AESDVELETMARNERVLLESELNDLARNIVDAVM 109

Query: 103 PKDT-DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           P+   D    C LE+ AG GG EA LF  +L  MY  +AA + W   V+   +   GG +
Sbjct: 110 PRTELDVLSKCQLEVTAGVGGIEAMLFTSELVDMYRNFAAFKGWTWTVMQQDNIQLGGVR 169

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED 221
             +  +SG   + R++FE+GVHRVQR+P T+ + R+HTS A+V+VLPE  ++D  +P   
Sbjct: 170 SALIAVSGDEAYGRLRFEAGVHRVQRMPITDKT-RMHTSTASVSVLPEPEKVDAYVPSNS 228

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           ++I+TMRASG GGQ+VN   +AVR+TH  +GI V    E+ QH N   A + L A L   
Sbjct: 229 VKIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQHLNIQIAFRRLAAILMQE 288

Query: 281 ERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDD 338
           +  R+  + +A RKLQ+GS  R+E++RTYNF   R+TDHR+  +  ++  V++G   +D 
Sbjct: 289 KMDRIYEKSAAARKLQVGSKARAEKVRTYNFKDDRVTDHRLKKSWSRVTDVMRGGHELDA 348

Query: 339 IINPLLTAHQAKMIGSASE 357
           IIN L   ++   +    E
Sbjct: 349 IINELSDDYKWGRLEEIIE 367


>gi|67526009|ref|XP_661066.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4]
 gi|40743816|gb|EAA63002.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4]
          Length = 367

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 188/346 (54%), Gaps = 24/346 (6%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +L    A +  +++ S       K+      + P+    + +    +   +LH+++ D +
Sbjct: 19  NLAAEHANLSNQLTTSFDP----KIARRAGELGPVAKAWAEWSNANESMSELHSMLEDPD 74

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +++E+R +A  E+   E ++  + + +   L+P+    D SC+LEIR G GG EA++F  
Sbjct: 75  TEAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFADLSCLLEIRPGAGGDEASIFAF 134

Query: 131 DLFRMYERYAALRKWKVEVLSSSDND--DGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           +L +MY  + A +  +  ++     D       E V  +   G +  ++ ESGVHRVQRV
Sbjct: 135 ELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRV 194

Query: 189 PATEASGRVHTSAATVAVLPEAA--------------EIDVDIPLEDIRIDTMRASGSGG 234
           P TEA GR HTSA +V VLP                   D  I  +++R + MRASG+GG
Sbjct: 195 PTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGG 254

Query: 235 QHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVN T+SA+R+TH+PTGI+V+    +SQH NR +A ++LRA+L +  ++    E    R
Sbjct: 255 QHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQELVELR 314

Query: 294 KLQIGSGDRS---ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI 336
           +  +G   R    +++RTYN+ Q R TDHR   T++ L+ VL+G +
Sbjct: 315 RGAMGGIGRMGRGDKVRTYNYGQSRCTDHRSGFTVHNLDNVLEGVL 360


>gi|121591760|ref|ZP_01678968.1| peptide chain release factor 1 [Vibrio cholerae 2740-80]
 gi|121546377|gb|EAX56631.1| peptide chain release factor 1 [Vibrio cholerae 2740-80]
          Length = 242

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 109/244 (44%), Positives = 160/244 (65%), Gaps = 6/244 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS+ + GGYKE++A ++G G +  +K
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATEA GR+HTSA TVAV+PE  E +  +I   D++IDT R+SG+GGQH
Sbjct: 179 FESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQH 238

Query: 237 VNTT 240
           VNTT
Sbjct: 239 VNTT 242


>gi|146300308|ref|YP_001194899.1| peptide chain release factor 2 [Flavobacterium johnsoniae UW101]
 gi|146154726|gb|ABQ05580.1| bacterial peptide chain release factor 2 (bRF-2) [Flavobacterium
           johnsoniae UW101]
          Length = 254

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 81/241 (33%), Positives = 132/241 (54%), Gaps = 8/241 (3%)

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
           S +++I AG GG+E+  + G L RMY  +     +K++ L+  + D  G K +     G 
Sbjct: 10  SAVVQITAGAGGTESCDWAGMLMRMYMMWGESYGYKIKELNFQEGDVAGIKTVTLEFEGD 69

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRA 229
             F  +K E+GVHR+ R+   +++ + HTS  +V V P     I++DI   DI I T R+
Sbjct: 70  YSFGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDSIEIDINPADIEITTSRS 129

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG+GGQ+VN  ++ V++ H PTGI +  S  +SQ  NR RAM++LR++LY++E K+   +
Sbjct: 130 SGAGGQNVNKVETKVQLVHKPTGIQIQCSETRSQQDNRQRAMQMLRSQLYEIELKKQQAQ 189

Query: 289 RSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           R+     K++I  G    +IR Y     + + D R       ++ V+ G ID  +   L 
Sbjct: 190 RADIEAGKMKIEWG---SQIRNYVMQPYKLVKDVRTGYETSDVDGVMNGNIDAFLKAYLM 246

Query: 346 A 346
            
Sbjct: 247 M 247


>gi|170595371|ref|XP_001902354.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi]
 gi|158590015|gb|EDP28797.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi]
          Length = 382

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 176/348 (50%), Gaps = 8/348 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             + ++   ++    +   ++    +T     +  + +    +  K +    L  ++ + 
Sbjct: 26  EVIFSKLKALQKDGKDESRINNSALVT----HLETVTTLAHKFYDKLEMLTQLDLLLKEG 81

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           N                E+    +    + ++   + D   +C LEI  G GG EA+LF 
Sbjct: 82  NDPEIQEIAKLDSEQLTEELDSVVNKLTDVVIPVTEYDLLNNCQLEITPGVGGVEASLFA 141

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
            +L +MY  YA   KWK        +  GG +  V  + G G F  +++E+GVHRVQR P
Sbjct: 142 SELAQMYHNYAQFMKWKWTPYQMDVSPSGGIRSAVVFVRGNGAFRTLRYEAGVHRVQRFP 201

Query: 190 ATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            T+ + R+HTS + VAVLPE  +I+  +   D++++TMRASG GGQ+VN   +AVR+TH 
Sbjct: 202 VTDKT-RMHTSTSVVAVLPEPDKIEACVTPADVKVETMRASGPGGQNVNQRSTAVRLTHR 260

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
            TG+ V  + E++Q+ N   A K L A L   +      + S++RKLQIG+  R+E++RT
Sbjct: 261 ETGVTVHCTDERTQYSNMEIAYKRLAAILLQRKLDETQKQYSSSRKLQIGTKARAEKVRT 320

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
           YNF   ++TDHR+      +  V++G   ++ II  L    +A+ +  
Sbjct: 321 YNFKDDQVTDHRLGRAWQGVANVMKGNSVLNQIIQSLDELSKAQYLKE 368


>gi|259485545|tpe|CBF82657.1| TPA: mitochondrial translation release factor (RF-1), putative
           (AFU_orthologue; AFUA_3G05410) [Aspergillus nidulans
           FGSC A4]
          Length = 418

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 114/358 (31%), Positives = 193/358 (53%), Gaps = 26/358 (7%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           +L    A +  +++ S       K+      + P+    + +    +   +LH+++ D +
Sbjct: 47  NLAAEHANLSNQLTTSFDP----KIARRAGELGPVAKAWAEWSNANESMSELHSMLEDPD 102

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +++E+R +A  E+   E ++  + + +   L+P+    D SC+LEIR G GG EA++F  
Sbjct: 103 TEAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFADLSCLLEIRPGAGGDEASIFAF 162

Query: 131 DLFRMYERYAALRKWKVEVLSSSDND--DGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           +L +MY  + A +  +  ++     D       E V  +   G +  ++ ESGVHRVQRV
Sbjct: 163 ELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRV 222

Query: 189 PATEASGRVHTSAATVAVLPEAA--------------EIDVDIPLEDIRIDTMRASGSGG 234
           P TEA GR HTSA +V VLP                   D  I  +++R + MRASG+GG
Sbjct: 223 PTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGG 282

Query: 235 QHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           QHVN T+SA+R+TH+PTGI+V+    +SQH NR +A ++LRA+L +  ++    E    R
Sbjct: 283 QHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQELVELR 342

Query: 294 KLQIGSGDRS---ERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTA 346
           +  +G   R    +++RTYN+ Q R TDHR   T++ L+ VL+G   +  +++ + + 
Sbjct: 343 RGAMGGIGRMGRGDKVRTYNYGQSRCTDHRSGFTVHNLDNVLEGGETLVKVMDSVRSW 400


>gi|194705206|gb|ACF86687.1| unknown [Zea mays]
 gi|195648693|gb|ACG43814.1| hypothetical protein [Zea mays]
          Length = 230

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 105/223 (47%), Positives = 150/223 (67%), Gaps = 2/223 (0%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY+RY     WK + +S S+ + GGYK  V  + G+ V+S++KFESGVHRVQRVP TEA 
Sbjct: 1   MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI- 253
           GRVHTS ATVA++PEA E+DV I  +DI + T R+ G+GGQ+VN  ++AV + H PTGI 
Sbjct: 61  GRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGIR 120

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQ 313
           +  + E+SQ QNR RA ++LRA+LY+++ +         RKLQ+G+G RSE+IRTYN+  
Sbjct: 121 IFCTEERSQLQNRERAFQLLRAKLYEIKLREQQESLRNQRKLQVGTGARSEKIRTYNYKD 180

Query: 314 GRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
            R+TDHR+ +  ++L   L G I+  I    T  Q +++   +
Sbjct: 181 NRVTDHRLKMN-FELTSFLLGDIESAIQSCATMEQQELLEEMA 222


>gi|303279527|ref|XP_003059056.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458892|gb|EEH56188.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 337

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 87/335 (25%), Positives = 146/335 (43%), Gaps = 13/335 (3%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKIS---IYDQKKQEEQDLHTVIG 67
            L+   A+++ R SE+   D           ++ +  ++     ++ K  + +    +I 
Sbjct: 5   SLRAMLADLDKRASEATLWDDPKNAKAVMEQLADVREQLELAAAFEDKLGDARTALEMIA 64

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
           D  S   + +LA     AI      LE       L   T D     + I AG GG +A  
Sbjct: 65  DDPSSDVVPELASEISDAIASLEAALET-WETRRLLVGTYDALGATVFINAGFGGFDAHE 123

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L   Y  +A  R + V V + +  ++ G + +   I GR  +  +  E G HR+ R
Sbjct: 124 WAERLESCYVAWARRRGFAVRVEARTPGEEVGLRSVTLEIDGRFAYGYLASEKGAHRMVR 183

Query: 188 VPATEAS--GRVHTSAATVAVLPEAAEIDVDIPLEDI----RIDTMRASGSGGQHVNTTD 241
           +           H++   V V P   E    I          I TMR+ G+GGQ+VN  +
Sbjct: 184 IGGVAGQTPRGRHSNFVAVDVAPTLEEKARSIHWSPYDRVRVITTMRSGGAGGQNVNKVE 243

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +AVR+ H+PTGI+V    E+SQ  NR +A+  L+A+L  V  +R   + +A R   +   
Sbjct: 244 TAVRMKHLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVR-GDVVRA 302

Query: 301 DRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQG 334
           +R ++IR Y     + + D R  +    ++ VL G
Sbjct: 303 ERGQQIRNYVLHPYKLVKDVRTGVETSDVDGVLSG 337


>gi|216264821|ref|ZP_03436813.1| peptide chain release factor 2 [Borrelia burgdorferi 156a]
 gi|226320754|ref|ZP_03796310.1| peptide chain release factor 2 [Borrelia burgdorferi 29805]
 gi|215981294|gb|EEC22101.1| peptide chain release factor 2 [Borrelia burgdorferi 156a]
 gi|226233809|gb|EEH32534.1| peptide chain release factor 2 [Borrelia burgdorferi 29805]
          Length = 269

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 98/269 (36%), Positives = 151/269 (56%), Gaps = 9/269 (3%)

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +      + +   ++  +   K+  D  +  L I +G GG+EA  +V  L+RMY RYA  
Sbjct: 1   MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+   +A+ + HTS A
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 203 TVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITHI TGI+  + S++
Sbjct: 120 SVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQG-RIT 317
           SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +IR+Y F     + 
Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---QIRSYVFQPYNLVK 236

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           DHR          V+ G ID+ I   L  
Sbjct: 237 DHRTKFENSNTTSVMDGNIDNFIEEYLKW 265


>gi|270285531|ref|ZP_06194925.1| peptide chain release factor 2 [Chlamydia muridarum Nigg]
 gi|301336928|ref|ZP_07225130.1| peptide chain release factor 2 [Chlamydia muridarum MopnTet14]
          Length = 220

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 89/219 (40%), Positives = 124/219 (56%), Gaps = 9/219 (4%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A    WKVEV+   D +  G K I   + G   +   K ESGVHR+ R+   +++
Sbjct: 1   MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH PTGI
Sbjct: 61  AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTYN 310
           +V   SE+SQ QNR   M +LRAR+Y    +    +++ NRK   +I  G    +IR Y 
Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWG---SQIRNYV 177

Query: 311 FSQG-RITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           F     + D R    +  ++ ++ G  +D  I   L  +
Sbjct: 178 FQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLADY 216


>gi|218249952|ref|YP_002374604.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7]
 gi|223889107|ref|ZP_03623696.1| peptide chain release factor 2 [Borrelia burgdorferi 64b]
 gi|224533928|ref|ZP_03674513.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a]
 gi|226322014|ref|ZP_03797539.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26]
 gi|218165140|gb|ACK75201.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7]
 gi|223885356|gb|EEF56457.1| peptide chain release factor 2 [Borrelia burgdorferi 64b]
 gi|224512931|gb|EEF83297.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a]
 gi|226232604|gb|EEH31358.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26]
          Length = 282

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 100/286 (34%), Positives = 155/286 (54%), Gaps = 16/286 (5%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I ++  D+   ++    +    K++  +      L          +  L I +G GG+EA
Sbjct: 4   IAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDA-------NNAFLTIHSGAGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +V  L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+
Sbjct: 57  CDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRL 115

Query: 186 QRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAV
Sbjct: 116 IRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAV 175

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGD 301
           RITHI TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+
Sbjct: 176 RITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN 235

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 236 ---QIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 278


>gi|225552175|ref|ZP_03773115.1| peptide chain release factor 2 [Borrelia sp. SV1]
 gi|225371173|gb|EEH00603.1| peptide chain release factor 2 [Borrelia sp. SV1]
          Length = 282

 Score =  166 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 100/286 (34%), Positives = 154/286 (53%), Gaps = 16/286 (5%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I ++  D+   ++    +    K++  +      L          +  L I +G GG+EA
Sbjct: 4   IAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDA-------NNAFLTIHSGAGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +V  L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+
Sbjct: 57  CDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRL 115

Query: 186 QRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A  + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAV
Sbjct: 116 IRISPFDADKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAV 175

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGD 301
           RITHI TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+
Sbjct: 176 RITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGN 235

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 236 ---QIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 278


>gi|195941813|ref|ZP_03087195.1| peptide chain release factor 2 [Borrelia burgdorferi 80a]
          Length = 282

 Score =  166 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 100/286 (34%), Positives = 155/286 (54%), Gaps = 16/286 (5%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           I ++  D+   ++    +    K++  +      L          +  L I +G GG+EA
Sbjct: 4   IAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDA-------NNAFLTIHSGAGGTEA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +V  L+RMY RYA  +K+K E++   + + GG K +   I G   +  +K E G+HR+
Sbjct: 57  CDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRL 115

Query: 186 QRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +A+ + HTS A+V V      +I++ I  EDIRIDT RASG+GGQHVN T SAV
Sbjct: 116 IRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAV 175

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGD 301
           RITHI TGI+  + S++SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+
Sbjct: 176 RITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN 235

Query: 302 RSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              +IR+Y F     + DHR          V+ G ID+ I   L  
Sbjct: 236 ---QIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKW 278


>gi|224533030|ref|ZP_03673636.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23]
 gi|224512024|gb|EEF82419.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23]
          Length = 269

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 98/269 (36%), Positives = 151/269 (56%), Gaps = 9/269 (3%)

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
           +      + +   ++  +   K+  D  +  L I +G GG+EA  +V  L+RMY RYA  
Sbjct: 1   MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           +K+K E++   + + GG K +   I G   +  +K E G+HR+ R+   +A+ + HTS A
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 203 TVAV-LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +V V      +I++ I  EDIRIDT RASG+GGQHVN T SAVRITHI TGI+  + S++
Sbjct: 120 SVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQG-RIT 317
           SQH+N+  AMKVL++RLY+  + +   +  +  + K +I  G+   +IR+Y F     + 
Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN---QIRSYVFQPYNLVK 236

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           DHR          V+ G ID+ I   L  
Sbjct: 237 DHRTKFENSNTTSVMDGNIDNFIEEYLKW 265


>gi|71008811|ref|XP_758238.1| hypothetical protein UM02091.1 [Ustilago maydis 521]
 gi|46097913|gb|EAK83146.1| hypothetical protein UM02091.1 [Ustilago maydis 521]
          Length = 526

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 128/377 (33%), Positives = 216/377 (57%), Gaps = 35/377 (9%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           ++  L  R  + +  +  +  VD+   + ++   + P+      +  K+++     ++  
Sbjct: 131 RLAQL--RIEKRQRLLELTDGVDSA-DIGKQLKELDPLRQAWDKFSAKRKQLISTISI-S 186

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK----SCILEIRAGTGGS 123
            ++ D ++R LA  E+L +E+E+ EL +++  L+L   TD  +      +LE+R G GG 
Sbjct: 187 QNDPDEDMRALASEEILLLEEELLELRSDMQELILESVTDPIEAKAVGAVLEVRPGVGGQ 246

Query: 124 EAALFVGDLFRMYERYAALR--------KWKVEVLSSSDNDDGG--------YKEIVATI 167
           E+ LF  ++ RMY+R+   +        +W+VE+LSS+  D            KE +  +
Sbjct: 247 ESTLFTAEVARMYQRFCEQKPVEEDGSGEWQVEMLSSTSVDVSTSSSGSGSGLKEAIIEV 306

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA----EIDVDIPLEDIR 223
            G+GVF ++K+E+GVHRVQR+P+T++ G++ TS   V VLP +     + D  +  +D++
Sbjct: 307 KGKGVFKKLKYEAGVHRVQRIPSTQSLGKLQTSTIAVMVLPISEGSEHKADDLVDPKDVK 366

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVER 282
           ++ MR+ G+GGQHVN T+SA+R+TH PTGI V+    +SQHQNR +A  VLRARL D   
Sbjct: 367 VEVMRSRGAGGQHVNKTESAIRLTHEPTGISVSMQDSRSQHQNRTKAWAVLRARLLDRRL 426

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY------I 336
           K+        R  Q+ S DRS+R+RTYNF Q R+TDHRINL+L  ++ +++G       +
Sbjct: 427 KQEVEGNRERRLAQVASMDRSDRVRTYNFPQDRVTDHRINLSLNGIDAIMEGEHDPGTGL 486

Query: 337 DDIINPLLTAHQAKMIG 353
           D I+  L    +A+ + 
Sbjct: 487 DYIMESLRVESEARKVK 503


>gi|308478247|ref|XP_003101335.1| hypothetical protein CRE_13471 [Caenorhabditis remanei]
 gi|308263236|gb|EFP07189.1| hypothetical protein CRE_13471 [Caenorhabditis remanei]
          Length = 390

 Score =  165 bits (418), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 181/349 (51%), Gaps = 16/349 (4%)

Query: 9   ICDLKNRFAEIEL--RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           +  +  R  E +     +    +  +  + ++ A +S   S++   +    + ++   + 
Sbjct: 43  LKTVIERLKECQEGNASAAPEQISYWEAIAKQAAIVSDTRSELFQLNSIINDLKETEEMR 102

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D E            E    EL+     ++   + D    C +E+ +G GG EA 
Sbjct: 103 KLAEGDVESIK---------ETLESELQVLATRVVPLNNLDVLSKCQIELSSGAGGQEAM 153

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF G+L  MY++ AA   WK + L   +   GG +  +  +SG  V+++M+FE+GVHRVQ
Sbjct: 154 LFTGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVYAKMRFEAGVHRVQ 213

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP  ++  R+HTS ++++VLPE  E+ V +P + ++I+ MRASG GGQ+VN   +AVR+
Sbjct: 214 RVPVNDS--RMHTSTSSISVLPEPEEVSVVVPSDSVKIEAMRASGPGGQNVNKRSTAVRM 271

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH  TGI V    E+ QH N   A K L A L   +   M  +  + RKLQ+GS  R+E+
Sbjct: 272 THKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLEKIVSRRKLQVGSKARAEK 331

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVL-QGY-IDDIINPLLTAHQAKMI 352
           IRTYNF   ++TDHRI + +  ++  L  G  +  +I+ L   H    +
Sbjct: 332 IRTYNFQHDKVTDHRIQMAITGVDEFLSAGETLHAMIDRLQEQHMEDRL 380


>gi|308454222|ref|XP_003089760.1| hypothetical protein CRE_07913 [Caenorhabditis remanei]
 gi|308269005|gb|EFP12958.1| hypothetical protein CRE_07913 [Caenorhabditis remanei]
          Length = 390

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 181/349 (51%), Gaps = 16/349 (4%)

Query: 9   ICDLKNRFAEIEL--RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           +  +  R  E +     +    +  +  + ++ + +S   S++S  +    + ++   + 
Sbjct: 43  LKTVIERLKECQEGNASAAPEQISYWEAIAKQASIVSDTRSELSQLNSIINDLKETEEMR 102

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D E            E    EL+     ++   + D    C +E+ +G GG EA 
Sbjct: 103 KLAEGDVESIK---------ETLESELQELATRVVPLNNLDVLSKCQIELSSGAGGQEAM 153

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF G+L  MY++ AA   WK + L   +   GG +  +  +SG  V+++M+FE+GVHRVQ
Sbjct: 154 LFTGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVYAKMRFEAGVHRVQ 213

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP  ++  R+HTS ++++VLPE  E+ V +P + ++I+ MRASG GGQ+VN   +AVR+
Sbjct: 214 RVPVNDS--RMHTSTSSISVLPEPEEVSVVVPSDSVKIEAMRASGPGGQNVNKRSTAVRM 271

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH  TGI V    E+ QH N   A K L A L   +   M  +  + RKLQ+GS  R+E+
Sbjct: 272 THKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLEKIVSRRKLQVGSKARAEK 331

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVL-QGY-IDDIINPLLTAHQAKMI 352
           IRTYNF   ++TDHRI + +  +   L  G  +  +I+ L   H    +
Sbjct: 332 IRTYNFQHDKVTDHRIQMAITGVNEFLSAGETLHAMIDRLQEQHMEDRL 380


>gi|224532320|ref|ZP_03672952.1| peptide chain release factor 2 [Borrelia valaisiana VS116]
 gi|224511785|gb|EEF82191.1| peptide chain release factor 2 [Borrelia valaisiana VS116]
          Length = 269

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 97/250 (38%), Positives = 143/250 (57%), Gaps = 9/250 (3%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
             K+  D     L I +G GG+EA  +V  L+RMY RY   +K+K E++   + + GG K
Sbjct: 20  YFKEELDANGAFLTIHSGAGGTEACDWVAMLYRMYSRYVERKKYKTELIDLLEAE-GGIK 78

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLE 220
            +   I G   +  +K E G+HR+ R+   +A+ + HTS A+V V      +I++ I  E
Sbjct: 79  SVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPE 138

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           DIRIDT RASG+GGQHVN T SAVRITHI TGI+  + S++SQH+N+  AMKVL++RLY+
Sbjct: 139 DIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRSQHKNKEMAMKVLKSRLYE 198

Query: 280 VERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYI 336
             + +   +  +  + K +I  G+   +IR+Y F     + DHR          V+ G I
Sbjct: 199 YYKNKEDEKNKSKQDTKKEISWGN---QIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNI 255

Query: 337 DDIINPLLTA 346
           D+ I   L  
Sbjct: 256 DNFIEEYLKW 265


>gi|225011020|ref|ZP_03701485.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
 gi|225004825|gb|EEG42782.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
          Length = 288

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 8/284 (2%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++   ++     D  +I        + +LE    +  +  +  D+ S +L+I AG GG+E
Sbjct: 1   MMEFADAGEITEDELKIAYQNTLDVLEDLE----FRNMLSEEGDNLSAVLQITAGAGGTE 56

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           +  +   L RMY  ++    +K++ L+  + D  G K +   I G   F  +K E+GVHR
Sbjct: 57  SCDWAAMLMRMYMMWSQKAGFKIKELNYQEGDVAGVKTVTLGIEGDFAFGWLKGENGVHR 116

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++ + HTS A+V V P   +    +    DI     R+ G+GGQ+VN  ++ 
Sbjct: 117 LVRISPFDSNAKRHTSFASVYVYPLIDDSIEIVINPADISWAFARSGGAGGQNVNKVETK 176

Query: 244 VRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           V +TH PTGI++  S  +SQ  NR  AMK+L+++LY++E ++    RS     ++   + 
Sbjct: 177 VILTHHPTGIIIHNSETRSQLDNRENAMKLLKSQLYEIELRKRQEARSEIESSKMK-IEW 235

Query: 303 SERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR Y     + + D R       ++ VL G++D  +   L 
Sbjct: 236 GSQIRNYVLHPYKLVKDVRSGTETGDVDAVLDGHLDPFLKGFLM 279


>gi|111114896|ref|YP_709514.1| peptide chain release factor 2 [Borrelia afzelii PKo]
 gi|216263773|ref|ZP_03435767.1| peptide chain release factor 2 [Borrelia afzelii ACA-1]
 gi|110890170|gb|ABH01338.1| peptide chain release factor 2 [Borrelia afzelii PKo]
 gi|215979817|gb|EEC20639.1| peptide chain release factor 2 [Borrelia afzelii ACA-1]
          Length = 269

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 97/250 (38%), Positives = 145/250 (58%), Gaps = 9/250 (3%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
             K+  D     L I +G GG+EA  +V  L+RMY RYA  +K+K E++   + + GG K
Sbjct: 20  YFKEELDANDAFLTIHSGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIK 78

Query: 162 EIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLE 220
            +   I G   +  +K E G+HR+ R+   +A+ + HTS A+V +      +I++ I  E
Sbjct: 79  SVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFASVFIDPVIDEKIEIIIKPE 138

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYD 279
           DIRIDT RASG+GGQHVN T SAVRITHI TGI+  + S++SQH+N+  AMKVL++RLY+
Sbjct: 139 DIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYE 198

Query: 280 VERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYI 336
             + +   +  +  + K +I  G+   +IR+Y F     + DHR       +  V+ G I
Sbjct: 199 YYKNKEDEKNKSKQDTKKEISWGN---QIRSYVFQPYNLVKDHRTKFENSNITSVMDGNI 255

Query: 337 DDIINPLLTA 346
           D+ I   L  
Sbjct: 256 DNFIEEYLKW 265


>gi|126643323|ref|YP_001086307.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
          Length = 278

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 98/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +     D  + +  Q E+   E+E+ +LE    +  +  +  D   C +EI+AG+GG+EA
Sbjct: 4   LAVEADDESLLEDVQSELSTAEEELAKLE----FRRMFSNPMDPNPCYVEIQAGSGGTEA 59

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+     +K E++  SD D  G K     + G   +  ++ ESGVHR+
Sbjct: 60  QDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRL 119

Query: 186 QRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R    ++  R HTS + V + PE    I++DI   D+R DT RASG+GGQH+N TDSAV
Sbjct: 120 VRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAV 179

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           R+THIPTGI+V   +++SQH NR  A K LRA+LY++E ++         + K  IG G 
Sbjct: 180 RLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALEDSKSDIGWG- 238

Query: 302 RSERIRTYNFSQGRITDHRINLTL 325
              +IR+Y     RI D R  + +
Sbjct: 239 --SQIRSYVLDDSRIKDLRTGVEI 260


>gi|295111639|emb|CBL28389.1| peptide chain release factor 2 [Synergistetes bacterium SGP1]
          Length = 224

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 4/225 (1%)

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L RMY RYA     K  VL ++++++ G K     + G   +  +K E GVHR+ R+  
Sbjct: 1   MLLRMYLRYAERDGLKATVLEATNDEEAGIKSATVMMEGDNAYGFLKAERGVHRLVRISP 60

Query: 191 TEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            +++ R HTS A+V V PE ++  DVDI  ED+++DT RASG+GGQ+VN TDSA+RITH+
Sbjct: 61  FDSAHRRHTSFASVLVTPEFSDDVDVDIRPEDLKVDTYRASGAGGQYVNRTDSAIRITHL 120

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PTGI+V   +E+SQH NR  AM VLR++LY+   +   +E ++    +  +     +IR+
Sbjct: 121 PTGIVVTCQNERSQHMNRQVAMHVLRSKLYERALQERQDELASVVGDKKET-TWGSQIRS 179

Query: 309 YNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           Y       + DHR  L     + VL G IDD I   L     + +
Sbjct: 180 YVLHPYTLVKDHRTGLEKGNAQAVLDGDIDDFIMEYLRFRARREL 224


>gi|261749632|ref|YP_003257318.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497725|gb|ACX84175.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 367

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 86/363 (23%), Positives = 170/363 (46%), Gaps = 29/363 (7%)

Query: 3   FLSHKQICDLKNRFAEIELRMS----------------ESPSVDAYIKLTEEYAAISPII 46
            + ++ I  +  +  +++  ++                         K       +  + 
Sbjct: 1   MIKNEDIQSISEKINKLQEVLNIDQIKESIEKEEKKISNQNFWKNCKKAKNFTKRLHAMK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           + I  + + K   ++L  +      +   +++          + + L + I +  L  + 
Sbjct: 61  TCIKNFFELKNALEELEILFSLSKEEDLEKEVKI-----QLNKTKNLLSNIEFKNLLSEE 115

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D  + +L+I +G GG+E+  +   L RMY  +A   K+ V+ +     D  G K +   
Sbjct: 116 EDIFNAVLQISSGAGGTESCDWTSMLMRMYIMWAEKNKFSVKNIHHIPGDITGIKSVTLE 175

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRID 225
           + G   F  +K E+GVHR+ R+   + + + HTS ++V V P    +ID++I + DI+ +
Sbjct: 176 LDGLYAFGYLKGENGVHRLIRLSPFDNNSKRHTSFSSVYVYPLVDKDIDININMSDIQWN 235

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVTS-SEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+SGSGGQ+VN  +S VR+ H PTGI++ +   +SQ QNR +A+ +L++RL+++E  +
Sbjct: 236 TFRSSGSGGQNVNKVESGVRLRHHPTGIIIENTETRSQMQNRQKALHLLKSRLFEIEISK 295

Query: 285 MANERSAN--RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341
              +++     K +I  G    +IR Y     + + D R      ++  V+ G ID  + 
Sbjct: 296 KNEKKNKIESSKKKIEWG---SQIRNYIMHPYKLVKDLRTGYETTQIHSVMNGEIDIFLK 352

Query: 342 PLL 344
             L
Sbjct: 353 KFL 355


>gi|328788515|ref|XP_001119866.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Apis mellifera]
          Length = 354

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 110/299 (36%), Positives = 175/299 (58%), Gaps = 16/299 (5%)

Query: 39  YAAISPIISKISIYDQKK--QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENE 96
              ++ +++     D++K     ++L  +  +              +  +++ +   E  
Sbjct: 35  KKYLNYLMNAYQNEDERKGINGNEELKNLAKEEE------------LTYMQQLLEIDEQI 82

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
           +N ++   D +   + I+EI  G GG EA LF  DL  MY +Y     +  E+L    N+
Sbjct: 83  LNIIIKYIDVEHYDNIIMEIVPGVGGQEAMLFAKDLLNMYIKYFNHIGFNYEILEILSNE 142

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD 216
             G ++    IS    F ++K+E GVHRVQR+PATE SGR+HTS A V +LPE  ++D+ 
Sbjct: 143 LNGLRKATVLISDNNAFKKLKYEGGVHRVQRIPATEKSGRLHTSTAVVTILPEPKDVDIK 202

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           +  +D+ I++ +ASG+GGQHVNTTDSA+RITHIPTG +V   + +SQ +N+  A+  L++
Sbjct: 203 LEDKDLIIESKKASGAGGQHVNTTDSAIRITHIPTGTIVTCQTNRSQIKNKQIALTKLKS 262

Query: 276 RLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQ 333
            LY+ E  +  +  +  RK QIG   R+E+IRTYNF+Q R+TDHRI N T+Y L+  ++
Sbjct: 263 LLYEEELNKQVSFINQIRKKQIGKRLRNEKIRTYNFNQDRVTDHRIPNGTMYNLKEFME 321


>gi|189191194|ref|XP_001931936.1| peptide chain release factor 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973542|gb|EDU41041.1| peptide chain release factor 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 321

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 109/313 (34%), Positives = 172/313 (54%), Gaps = 22/313 (7%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I D  +D E+R LA  ++  I  ++      +   L+P        C+LEIR G GGSE
Sbjct: 1   MIHDSTTDPELRSLASDDLEEIRTQLVHASQSLITSLVPVHPFAHLPCLLEIRPGAGGSE 60

Query: 125 AALFVGDLFRMYERYAALRKWKVE---VLSSSDNDDGGY--KEIVATISGRGVFSRMKFE 179
           AA+F GDLFRMY  +     ++       + +   + G    E +  +     +   + E
Sbjct: 61  AAIFAGDLFRMYMAFCNRNGFRTNLLKYENINGTTEAGVPLSEAIMEVENENAYGVFRCE 120

Query: 180 SGVHRVQRVPATEASGRVHTSAATVAVLP------------EAAEIDVDIPLEDIRIDTM 227
           +GVHRVQRVPATE  GR HTSAA+V VLP            +  E D  I  ++++++ M
Sbjct: 121 AGVHRVQRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYYIDPKEVKLEVM 180

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RASG+GGQHVN T+SAVR+TH+PT  +V     +SQH+N+ +A  +LRAR+    R++  
Sbjct: 181 RASGAGGQHVNKTESAVRLTHMPTNTVVAMQDSRSQHKNKEKAWALLRARIAQTRREKRE 240

Query: 287 NERSANRKLQIG--SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINP 342
            E +  R+  IG     R +++RTYN+ Q R+TDHR   T++ L+ V+ G   ++ ++  
Sbjct: 241 EEMANMRRSVIGVARMGRGDKVRTYNWGQQRVTDHRSGTTVHDLDDVMGGGQTLEKVMES 300

Query: 343 LLTAHQAKMIGSA 355
           + +    + + + 
Sbjct: 301 VRSWLMERDVEAL 313


>gi|303280341|ref|XP_003059463.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459299|gb|EEH56595.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 289

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 18/295 (6%)

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           +I D  S +++ +LA     A+      LE       L   T D     + I AG GG++
Sbjct: 1   MIADDPSSADVPELASEVSDAVNALEGALEA-WEARRLLGGTYDALGATVFIYAGAGGTD 59

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A  +   L R Y ++A  R + V V + +  D+ G K +   I GR  +  +  E G HR
Sbjct: 60  AQDWSEMLERCYLQWADRRGFAVRVEARTPGDEAGLKSVTLEIEGRYAYGYLASEKGTHR 119

Query: 185 VQRVPATEASG------RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           + R                 TS A V V+P           + I + TMR+ G+GGQ+VN
Sbjct: 120 LVRTSPFNKGAFSFIHATRQTSFAAVDVMP--------TLEDKIEVTTMRSGGAGGQNVN 171

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
             ++AVR+ H+PTGI+V    E+SQ  NR +A+  L+A+L  V  +R   + +A R   +
Sbjct: 172 KVETAVRMKHLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVR-GDV 230

Query: 298 GSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
              +  ++IR Y F     + D R  +    +E V+ G +D+  N  L    ++ 
Sbjct: 231 VKAEWGQQIRNYVFHPYKMVKDVRTGMETSDVEGVMNGKLDEFQNAWLRWRASEK 285


>gi|302847640|ref|XP_002955354.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
           nagariensis]
 gi|300259426|gb|EFJ43654.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
           nagariensis]
          Length = 242

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 6/226 (2%)

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY R+A  +   V ++  +  ++ G K +   ++GR V+  ++ E G HR+
Sbjct: 1   MDWAEMLERMYLRWAEQQGHGVRLVDRAPGEEAGVKSVELEVAGRYVYGYLRAEKGTHRL 60

Query: 186 QRVPATEASGRVHTSAATVAVLP---EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
            R     A G   TS A V V+P        D+D+   D+   TMR+ G GGQ+VN  ++
Sbjct: 61  VRNSPFNAKGLRQTSFAGVDVMPVLGPGDLPDLDLNERDLEFSTMRSGGKGGQNVNKVET 120

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
            VRI H+PTGI V  + E+SQ QNR  AM +L++RL  V  ++ A   +  R   +   +
Sbjct: 121 GVRIVHLPTGISVKCTQERSQSQNREIAMDILKSRLLVVLEEQNARRVAEIRGDLVK-AE 179

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             ++IR Y F   + + D R  +    +  VL G + D +   L  
Sbjct: 180 WGQQIRNYVFHPYKLVKDTRTGVETSDVAAVLDGDLADFMAAYLRM 225


>gi|150024963|ref|YP_001295789.1| peptide chain release factor 2 [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771504|emb|CAL42973.1| Peptide chain release factor 2 (RF-2) [Flavobacterium psychrophilum
           JIP02/86]
          Length = 293

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 90/285 (31%), Positives = 149/285 (52%), Gaps = 8/285 (2%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +       +  +L++ E+    +        I    +  D  D  S +L+I AG GG+E+
Sbjct: 5   LQLAYDFYKEGELSEQELDQQYEATNTHIEGIELKNMLSDEGDALSAVLQITAGAGGTES 64

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY  +A  + +K++ L+    D  G K +   I G   F  +K E+GVHR+
Sbjct: 65  CDWAEMLMRMYIMWAQNQGYKIKELNFQKGDAAGIKTVTLEIEGDYSFGYLKGENGVHRL 124

Query: 186 QRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
            R+   +++ + HTS A+V V P     I+++I   DI I T R+SG+GGQ+VN  ++ V
Sbjct: 125 VRISPFDSNAKRHTSFASVYVYPLVDDTIEIEINPADIEIITARSSGAGGQNVNKVETKV 184

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGD 301
           ++TH PTGI +  S  +SQH NR RAM++LR++LY++E K+   +R+     K++I  G 
Sbjct: 185 QLTHKPTGIQIQCSETRSQHDNRNRAMQMLRSQLYEIELKKQQEQRNDIEAGKMKIEWG- 243

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR Y     + + D R       ++ V+ G ID  +   L 
Sbjct: 244 --SQIRNYVMQPYKLVKDVRTGHETSDVDSVMNGNIDAFLKAYLM 286


>gi|256370731|ref|YP_003108556.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009523|gb|ACU52883.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM]
          Length = 360

 Score =  163 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 97/354 (27%), Positives = 174/354 (49%), Gaps = 27/354 (7%)

Query: 3   FLSHKQICDLKNRFAEI----------------ELRMSESPSVDAYIKLTEEYAAISPII 46
            ++ +QI  L N+  EI                E ++          +  +   ++S   
Sbjct: 1   MVTKEQIKKLSNKIKEISISLEIKKKISFLKKEEKKLMSPFFWKNKKQSKKIIKSLSETK 60

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
             ++ ++  K+   DL  +     S  E      +E+  + K+I  L ++I       + 
Sbjct: 61  KWLNTFNLLKESFNDLKILFFYFKSGEETE----LEINNLLKKIENLISKIELKNFFFEK 116

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
           +D  + +L+I AG GG+E+  +V  L+RMY  +A    +K++ L+S   D  G+K I   
Sbjct: 117 EDASNAVLQISAGAGGTESCDWVSMLYRMYFLWAEKNNFKIKKLNSLQGDIIGFKSITFE 176

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRID 225
           + G   F  +K E+GVHR+ R+   + S + HTS A+V + P   +  ++DI   DI  D
Sbjct: 177 VKGFYPFGYLKGENGVHRLVRISPFDNS-KRHTSFASVYIYPLIKKDLNLDIKASDITWD 235

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+ G+GGQ+VN  ++ VR+ H PT I++  S  +SQ QN+ +A+K+L++RLY +E+++
Sbjct: 236 TFRSGGAGGQNVNKVETGVRLHHRPTNIIIENSETRSQIQNKNKALKLLKSRLYYIEKQK 295

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYID 337
           +   +    K +I  G    +IR Y     + + D +       +  VL G I+
Sbjct: 296 LFKSKMKFNKKKIEWG---SQIRNYIMHPYKLVKDIKTGYETSDIHSVLNGEIN 346


>gi|17542784|ref|NP_500737.1| hypothetical protein W03F8.3 [Caenorhabditis elegans]
 gi|6093954|sp|O44568|RF1M_CAEEL RecName: Full=Probable peptide chain release factor 1,
           mitochondrial; Short=MRF-1; Short=MtRF-1; Flags:
           Precursor
 gi|2736385|gb|AAB94190.1| Hypothetical protein W03F8.3 [Caenorhabditis elegans]
          Length = 389

 Score =  163 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 112/332 (33%), Positives = 177/332 (53%), Gaps = 14/332 (4%)

Query: 24  SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEV 83
           +    +  +  ++++ A +S   S++S       + ++   +      D E  +      
Sbjct: 59  AAPEQISYWESISKQSAKVSDGRSELSQLRTIINDPKETEEMRKLAEVDVESIE------ 112

Query: 84  LAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALR 143
              E    EL+     ++   + D    C +E+  G GG EA LF G+L  MY++ AA+ 
Sbjct: 113 ---ENLETELQELAVKIVPLNNLDVLSKCQIELSCGAGGQEAMLFTGELLDMYQKLAAVN 169

Query: 144 KWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAAT 203
            WK + L   +   GG +  +  +SG  V+++M+FE+GVHRVQRVP  ++  R+HTS A+
Sbjct: 170 SWKWDPLQVDNVPLGGVRSALIAVSGEKVYAKMRFEAGVHRVQRVPVNDS--RMHTSTAS 227

Query: 204 VAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQ 262
           ++VLPE  E+ V +P + ++I+ MRASG GGQ+VN   +AVR+TH  TGI V    E+ Q
Sbjct: 228 ISVLPEPEEVSVVVPSDSVKIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQ 287

Query: 263 HQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322
           H N   A K L A L   +   M  +  + RKLQ+GS  R+E+IRTYNF   R+TDHRI 
Sbjct: 288 HLNIQIAYKRLAAILMQKQVDAMLEKIVSKRKLQVGSKARAEKIRTYNFQHDRVTDHRIQ 347

Query: 323 LTLYKLEYVL-QGY-IDDIINPLLTAHQAKMI 352
           +++  +   L  G  +  +I  L   H    +
Sbjct: 348 MSITGVAEFLSAGETLQTMIERLQEQHLEDRL 379


>gi|330840796|ref|XP_003292395.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum]
 gi|325077351|gb|EGC31069.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum]
          Length = 330

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 91/335 (27%), Positives = 171/335 (51%), Gaps = 14/335 (4%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E  +S + ++D  IK  +EY ++  +I + +  +   ++ Q++  +      D E+ + +
Sbjct: 4   EELLSSNNNID--IKDIKEYNSLKAVIDEFNSLNNSFKDYQEIVEMSK-KEGDQEMLNES 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +  + ++     +LE  +         +DD SC +E+ AG GG+++  +   + +MY  +
Sbjct: 61  RNLLNSLYSICTDLEINVLM----IGEEDDNSCFIEVHAGVGGADSMDWTEIIHKMYINW 116

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + ++V ++  S   + G +     I G+  +  ++ E G+H++ R+       + HT
Sbjct: 117 AERKGFQVSIIE-SIPGEFGLRRATLKIDGKNAYGWLRTEMGIHKLIRISPFSPDFKRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTS 257
           S A+V V P +    +VD+   D++I+  R+SG+GGQHVNTT+SAVRI HIPT I +  S
Sbjct: 176 SFASVVVYPSSDNSINVDLKPNDLKIEFTRSSGAGGQHVNTTESAVRIVHIPTNISVFCS 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI-RTYNFSQG-R 315
           SE+SQHQN+   + +L+ +++         +    R     +G  S  I R+Y      R
Sbjct: 236 SERSQHQNKAIGLDLLKTKIFRHYLSIKNEKEKKFRDELGTNGFASGNIVRSYTMHPQER 295

Query: 316 ITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQ 348
           + D R      +L  +L+G   +D +I   L+  Q
Sbjct: 296 VKDQRTGFETSQLSKILEGDEELDKMIKLALSVSQ 330


>gi|268552039|ref|XP_002634002.1| Hypothetical protein CBG20109 [Caenorhabditis briggsae]
 gi|187023852|emb|CAP37210.1| hypothetical protein CBG_20109 [Caenorhabditis briggsae AF16]
          Length = 389

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 181/349 (51%), Gaps = 16/349 (4%)

Query: 9   ICDLKNRFAEIEL--RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           +  +  R A+ +     +    +  +  + ++ + +S    +++  +   ++  +   + 
Sbjct: 42  LKTVTERLAQCQAGNATAAPEQISYWEAIAKQSSVVSDTRFELAQLNSIIKDPNETEEMR 101

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
               +D E            E     L+     ++   + D    C +E+ +G GG EA 
Sbjct: 102 KLAEADVESLK---------ETLETGLKELAARVVPLTNLDVLSKCQIELSSGAGGQEAM 152

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF G+L  MY++ AA   WK + L       GG +  +  +SG  V+S+M+FE+GVHRVQ
Sbjct: 153 LFTGELLDMYQKLAATNSWKWDPLQVDSVPLGGVRSALIAVSGENVYSKMRFEAGVHRVQ 212

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP  ++  R+HTS A+++VLPE  E+ V +P + ++I+ MRASG GGQ+VN   +AVR+
Sbjct: 213 RVPVNDS--RMHTSTASISVLPEPEEVSVVVPSDSVKIEAMRASGPGGQNVNKRSTAVRM 270

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH  TGI V    E+ QH N   A K L A L   +   M  +  + RKLQ+GS  R+E+
Sbjct: 271 THKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLEKIVSRRKLQVGSKARAEK 330

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVL-QGY-IDDIINPLLTAHQAKMI 352
           IRTYNF   ++TDHRI + +  +E  L  G  +  +I+ L   H    +
Sbjct: 331 IRTYNFQHDKVTDHRIGMAITGVEEFLSAGESLVSMIDRLQEQHMEDRL 379


>gi|256045467|ref|ZP_05448354.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 141

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 96/139 (69%), Positives = 119/139 (85%)

Query: 219 LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLY 278
            EDIRIDTMRASG+GGQHVNTTDSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLY
Sbjct: 1   NEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLY 60

Query: 279 DVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDD 338
           D+ER++  +ERS  R+ Q+GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D+
Sbjct: 61  DMERQKAESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGELDE 120

Query: 339 IINPLLTAHQAKMIGSASE 357
           +++ L++ HQ  ++    E
Sbjct: 121 LVDALISDHQTALLAELGE 139


>gi|153005568|ref|YP_001379893.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5]
 gi|152029141|gb|ABS26909.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5]
          Length = 309

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 94/286 (32%), Positives = 144/286 (50%), Gaps = 13/286 (4%)

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           +  +   +   + + L  +  +   ++  ++ AQ   +  +         + +  +    
Sbjct: 3   AAYARVRRSLDDAEALAELADEARDEATRQEAAQQCEVVAKDLEA-----LEFQKMLSGE 57

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D    I+E+++G GG EA  +   L+RMY RY   R W VE       ++ G  +    
Sbjct: 58  HDRAGAIVEVKSGAGGVEAMDWAAMLYRMYTRYCERRGWSVEPADLVAGEEAGISQASFI 117

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRID 225
             G   +  +K E GVHR+ R+   + + R  TS A V V PE  +   VDI   D+RID
Sbjct: 118 ARGEFAYGFLKAERGVHRLVRISPFDQAARRQTSFAAVDVTPEIEDDIVVDIKEADVRID 177

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T R+SG+GGQ VN TDSAVR+TH+PTGI+V   +E+SQ +NR  A K+LRA+LY++E K+
Sbjct: 178 TYRSSGAGGQKVNKTDSAVRLTHLPTGIVVAVQNERSQQKNRGVAWKILRAKLYELEEKK 237

Query: 285 MANERSANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYK 327
            A  R A    K  I   D   +IR+Y     R + D R  +   K
Sbjct: 238 RAEARDAVEATKKDI---DFGSQIRSYVLQPYRMVKDLRTGVETGK 280


>gi|326520682|dbj|BAJ92704.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 101/225 (44%), Positives = 147/225 (65%), Gaps = 2/225 (0%)

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            RMY+RY  L  WK + +S S+ + GG+K  V  + G+ V+S++KFESGVHRVQRVP TE
Sbjct: 6   VRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTE 65

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
             GRVHTS ATVA++PEA E+DV I  +DI +   R+ G+GGQ+VN  ++A+ + H PTG
Sbjct: 66  TMGRVHTSTATVAIMPEADEVDVVIDPKDIELKAARSGGAGGQNVNKVETAIDLIHKPTG 125

Query: 253 I-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           I +  + EKSQ QN+ RA ++LRA+LY+++ +         R LQ+G+G RSE+IRTYN+
Sbjct: 126 IRIFCTEEKSQLQNKERAFQLLRAKLYEIKLREQQESIRTQRLLQVGTGARSEKIRTYNY 185

Query: 312 SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
              R+TDHR+ +  + L   L G I+  I       Q +++   +
Sbjct: 186 KDNRVTDHRLKMN-FILSSFLLGDIESAIQSCAALEQKELLEEMA 229


>gi|330951103|gb|EGH51363.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7]
          Length = 243

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 106/245 (43%), Positives = 161/245 (65%), Gaps = 6/245 (2%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++  +   + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV   ++++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY RYA  R W+VE+LS ++ + GGYKE++A + G  V+ ++K
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLK 178

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVP TE+ GR+HTSA TVAVLPE  E   ++I   D+R+DT R+SG+GGQH
Sbjct: 179 FESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQH 238

Query: 237 VNTTD 241
           VN TD
Sbjct: 239 VNKTD 243


>gi|213403996|ref|XP_002172770.1| peptide chain release factor 1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000817|gb|EEB06477.1| peptide chain release factor 1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 312

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 116/271 (42%), Positives = 164/271 (60%), Gaps = 5/271 (1%)

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
             SD E+  LA+ E   I K+  ++   ++ LL  K  +     +LE+RAG GGSEAALF
Sbjct: 3   DESDKELLQLAESENNEIMKKTHDVLEGMHKLLSLKPNNYQAPALLEVRAGVGGSEAALF 62

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
             +L  MYERY A R WK + LS S  ++G             V+  +  E+GVHRVQR 
Sbjct: 63  ASELLSMYERYCAFRNWKWKPLSLSKTENGNGITEAIVSVSGHVYGELFHEAGVHRVQRT 122

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPL----EDIRIDTMRASGSGGQHVNTTDSAV 244
           PATE  GR+HTS  +V VLP      ++        DIR+D MRA G+GGQHVN T+SAV
Sbjct: 123 PATETKGRLHTSTVSVIVLPTVNSQTLETESKLDANDIRVDVMRAKGAGGQHVNRTESAV 182

Query: 245 RITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           R+THIP+GI V     +SQH+N+ RA+ +LR+R+  +  + +  ++   R+ Q+ S  RS
Sbjct: 183 RLTHIPSGITVCMQDSRSQHENKERALLILRSRVAALRHENLQKQQHDARRKQVSSPVRS 242

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           E+IRTYN++Q RITDHR + ++Y  E  ++G
Sbjct: 243 EKIRTYNYAQNRITDHRCSCSMYDTEGFMEG 273


>gi|32491189|ref|NP_871443.1| hypothetical protein WGLp440 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166396|dbj|BAC24586.1| prfB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 278

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 79/278 (28%), Positives = 150/278 (53%), Gaps = 7/278 (2%)

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           +    +DS+       E++ + K ++++E     +    + +D  +C ++I+ G+GG +A
Sbjct: 1   MSLEENDSKSLLEVNNEIILLNKRMKKIEL----MCYFFEKNDRCNCYMDIQPGSGGIDA 56

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             +   L RMY ++A    +K +++  S ++  G K       G   +  +K E+G+HR+
Sbjct: 57  QDWASILLRMYLKWADRNNFKTDIIYKSSSEIAGIKSATVKFLGSYAYGWLKKETGIHRL 116

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL-EDIRIDTMRASGSGGQHVNTTDSAV 244
            R    +++G+ HTS  ++ V P+  +         D+RID  R+SG+GGQHVN T+SAV
Sbjct: 117 VRKSPFDSNGKRHTSFCSIFVYPDINDKIEIKINLSDLRIDVYRSSGAGGQHVNRTESAV 176

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PT I     S++SQH+N+ +A+  L+++LY+ E ++   ++    K +       
Sbjct: 177 RITHLPTKITTQCQSDRSQHKNKEKAINQLKSKLYEFELRKKNKDKKIIEKSKSKIA-WG 235

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
            +IR+Y F    + D R  +   K++ +L G ++  +N
Sbjct: 236 NQIRSYIFDNSIVKDLRTGIESKKIQSILDGDLNIFLN 273


>gi|328853865|gb|EGG03001.1| hypothetical protein MELLADRAFT_109720 [Melampsora larici-populina
           98AG31]
          Length = 413

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 123/362 (33%), Positives = 191/362 (52%), Gaps = 20/362 (5%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            RF +    +    S      L ++   +  I S +  +++      +L  +I + + D 
Sbjct: 50  KRFIKTNETIPSQGSWSNGEFL-KKSKRVDSIKSTLEEWERVMNLVSELQ-LISNTDPDP 107

Query: 74  EIRDL--------AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           ++R +                   +  +++ +   L P      +S ++EI+ G GG EA
Sbjct: 108 DMRQIALTELESLYSSSDQESSNNLSNIKSRLLESLFPTPISHRQSALVEIKPGVGGVEA 167

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG----GYKEIVATISGRGVFSRMKFESG 181
           A F   L  +Y R+A  +KWKV+ ++      G    G +E    I G  V+ RM++E+G
Sbjct: 168 AHFATSLMNLYNRHALRQKWKVKPVNVEFMVSGHSMDGLREATLEIEGEDVYKRMRWEAG 227

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD---IPLEDIRIDTMRASGSGGQHVN 238
           VHRVQRVP  + +  VHTS A V  L    +   +      +D+R++TMR+ G+GGQHVN
Sbjct: 228 VHRVQRVPVMQNTSSVHTSTAAVLPLDPGNQDSQEEALFEEKDVRMETMRSQGAGGQHVN 287

Query: 239 TTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            T+SAVR+TH+PTGI+V+    +SQHQNR RA  +LRARL D+  ++   E    R  Q+
Sbjct: 288 KTESAVRLTHVPTGIVVSMQDSRSQHQNRARAFMILRARLSDLRNQQKQVEERGLRLSQV 347

Query: 298 GSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSA 355
            + DR+++IRTYNF QGR+TDHRI LTL +L  V++G   ++ I   L      + I S 
Sbjct: 348 KTSDRNQKIRTYNFQQGRVTDHRIGLTLPRLHDVMEGGETLESIWMRLAEDELKQSIKSL 407

Query: 356 SE 357
            E
Sbjct: 408 LE 409


>gi|71900150|ref|ZP_00682291.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1]
 gi|71730099|gb|EAO32189.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1]
          Length = 175

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 97/172 (56%), Positives = 131/172 (76%), Gaps = 3/172 (1%)

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQHVNTTDSAVRI 246
           +PATE+ GR+HTSAATVA++PEA EI        D++IDT R+SG+GGQHVN T+SA+RI
Sbjct: 1   MPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRI 60

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           TH+PTG++V + +E+SQH NR +AMK L+A+L + ER + A   +  RKLQ+GSGDRS+R
Sbjct: 61  THLPTGVVVESQTERSQHANRDKAMKRLKAQLIESERSQQATAEAMTRKLQVGSGDRSQR 120

Query: 306 IRTYNFSQGRITDHRI-NLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           IRTYNF QGRITDHR+ NLTLY L  +++G +D +I+ L   HQA+ +   S
Sbjct: 121 IRTYNFPQGRITDHRVENLTLYDLPNIIEGDLDPLIDRLRQEHQAEELARLS 172


>gi|307198741|gb|EFN79544.1| Peptide chain release factor 1-like, mitochondrial [Harpegnathos
           saltator]
          Length = 362

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 116/318 (36%), Positives = 174/318 (54%), Gaps = 20/318 (6%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            ++  I       +++ ++  +  +     + +     + L         +         
Sbjct: 51  QLVENIQNLQDLVKQDTEIKKLAEEEELVYKEQLDELDKNLLDIILADMCKEC------- 103

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
                  + I+EI AG GG EA LFV +L+ MY  YA       EVL     D  GY+ +
Sbjct: 104 -----CDNIIIEITAGVGGQEAMLFVKNLYEMYIGYAEYLGLCHEVLDMDTTDCNGYRNV 158

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
              +SG+      ++E GVHRVQRVP TE  GRVHTS A+VA+LP  +E+++ I   D++
Sbjct: 159 TIIVSGKQTSK-FRYEGGVHRVQRVPTTEKLGRVHTSTASVAILPIPSEVEIVINERDLK 217

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           I+T RASGSGGQHVN T+SAVRITHIPTG++V     +SQ +N+  AM  LR  +Y+ + 
Sbjct: 218 IETKRASGSGGQHVNKTNSAVRITHIPTGLIVECQVHRSQIRNKKLAMMRLRNMMYEQQL 277

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQG--YIDDI 339
            +  + RS  RK QIG G R+E++RTYN++Q R+TDHR+ N T Y L   +QG   ++ +
Sbjct: 278 NKQTSFRSELRKKQIGMGFRNEKVRTYNYNQDRVTDHRLQNGTFYNLSEFMQGGAGLEQL 337

Query: 340 INPLLTAHQAKMIGSASE 357
            + L   H+   + +  E
Sbjct: 338 EDKL---HKDTRMKALLE 352


>gi|323964710|gb|EGB60181.1| peptide chain release [Escherichia coli M863]
          Length = 160

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 84/158 (53%), Positives = 117/158 (74%), Gaps = 2/158 (1%)

Query: 202 ATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            TVAV+PE  + +  DI   D+RIDT R+SG+GGQHVNTTDSA+RITH+PTGI+V    E
Sbjct: 1   MTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDE 60

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDRS+R RTYNF QGR+TDH
Sbjct: 61  RSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDH 120

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 121 RINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 158


>gi|126664153|ref|ZP_01735146.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
 gi|126623867|gb|EAZ94562.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
          Length = 285

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 86/275 (31%), Positives = 146/275 (53%), Gaps = 8/275 (2%)

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY 136
           D+ + EV    +       ++ +  +  D  D  S +L+I AG GG+E+  +   L RMY
Sbjct: 8   DVTEEEVETQYQHTLSHIEDLEFRNMLSDEGDSMSAVLQITAGAGGTESCDWASMLMRMY 67

Query: 137 ERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGR 196
             +   + +K++ L+  + +  G K +     G   F  +K E+GVHR+ R+   +++ +
Sbjct: 68  LMWGEKQGYKIKELNFQEGEVAGIKTVTLEFEGDFAFGYLKGENGVHRLVRISPFDSNAK 127

Query: 197 VHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            HTS A+V V P     I++DI   DI I T R+SG+GGQ+VN  ++ V++ H PTGI +
Sbjct: 128 RHTSFASVYVYPLVDDTIEIDINPADIEIITSRSSGAGGQNVNKVETKVQLFHKPTGIQI 187

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFS 312
             S  +SQ  NR RAM++L+++LY++E K+   +RS     K++I  G    +IR Y   
Sbjct: 188 QCSETRSQQDNRQRAMQMLKSQLYEIELKKQQAQRSDIEAGKMKIEWG---SQIRNYVMH 244

Query: 313 QGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             + + D R       +E ++ G ID+ +   L  
Sbjct: 245 PYKLVKDVRSGHESSDVEGIMNGEIDNFLKAYLMM 279


>gi|281205221|gb|EFA79414.1| class I peptide chain release factor [Polysphondylium pallidum
           PN500]
          Length = 434

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 103/349 (29%), Positives = 172/349 (49%), Gaps = 18/349 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVD----AYIKLT--EEYAAISPIISKISIYDQKKQEEQDLH 63
            D K R   IE  +  +           K    +E   +   I +I          +++ 
Sbjct: 91  QDKKQRLVLIENELKSNGVESQLSIDNKKAQTLKECQRLKRDIEQIEELQSNFMYYEEIS 150

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
                 N  S + ++++      ++        + +  +    +D + C LEI AG GG+
Sbjct: 151 GEAKKKNDQSMLSEMSECISDLYQQSTD-----LEFKSIMSGENDHEDCYLEIHAGAGGA 205

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           ++  +   L  MY +++  + +KV ++  S  +  GYK  +  I G   +   + ESGVH
Sbjct: 206 DSMDWSEILSNMYRKWSQRKDFKVTLVDISPGEV-GYKRAILKIEGEFAYGWCRSESGVH 264

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           ++ R+   ++SG+ HTS A+V   P   +   +D+  +D+ I+TMR+SG GGQH N T+S
Sbjct: 265 KLIRLSPFDSSGKRHTSFASVLAYPAVDDSISIDLQTKDLLIETMRSSGPGGQHSNKTES 324

Query: 243 AVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
           AVRITH PTGI V  S ++SQHQN+  AM +L+A++   E K+ A +  + R     +G 
Sbjct: 325 AVRITHTPTGISVAVSDQRSQHQNKSIAMDLLKAKIMASEIKKRAQQEESFRSDLGVNGW 384

Query: 302 RSERI-RTYNFS-QGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTA 346
            S+RI RTY    Q R+ D R NL    ++ +L+G   +D  I   L+ 
Sbjct: 385 ASDRIVRTYTMHPQTRVKDQRTNLESLNIDEILEGGDELDIFIKTALSQ 433


>gi|301347896|ref|ZP_07228637.1| peptide chain release factor 1 [Acinetobacter baumannii AB056]
 gi|301513180|ref|ZP_07238417.1| peptide chain release factor 1 [Acinetobacter baumannii AB058]
 gi|301597157|ref|ZP_07242165.1| peptide chain release factor 1 [Acinetobacter baumannii AB059]
          Length = 239

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 104/243 (42%), Positives = 160/243 (65%), Gaps = 8/243 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +R  E+   ++++  +     + KL+ E++ ++ I      Y Q ++
Sbjct: 1   MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    +     SD + +D+A+ E+ A +  + ELE+++N L++PKD +D  +  LEIR
Sbjct: 61  DIETAEMM----KSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F GDLFRMY +YA  + W++EVLS ++ + GG+KE++  + G GV+ R+K
Sbjct: 117 AGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLK 176

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-EIDVDIPLEDIRIDTMRASGSGGQH 236
           FESG HRVQRVPATE+ GRVHTSA TVA+LPE   + +V+I   D+RIDT RASG+GGQH
Sbjct: 177 FESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQH 236

Query: 237 VNT 239
           +N 
Sbjct: 237 INK 239


>gi|220918000|ref|YP_002493304.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955854|gb|ACL66238.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 309

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 104/299 (34%), Positives = 153/299 (51%), Gaps = 14/299 (4%)

Query: 54  QKKQEEQDLHTV--IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKS 111
             ++   D   +  + +   D   R  A     A+ +++  LE +           D   
Sbjct: 7   AVRRALDDAQALCELAEEARDEATRAEAAEAAEAVGRQLEGLELQKM----LSGPHDAAG 62

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            I+E+++G GG EA  +   L+RMY RY   R W+VE       ++ G       + G  
Sbjct: 63  AIVEVKSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDH 122

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRAS 230
            +  +K E GVHR+ R+   + + R  TS A V V PE  +   +DI   D+RIDT R+S
Sbjct: 123 PYGWLKAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSS 182

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQ VN TDSAVR+TH+PTGI+V   +E+SQ +NR  A K+LRA+LYD+E K+ A  R
Sbjct: 183 GAGGQKVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAAR 242

Query: 290 SANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
            A    K  I   D   +IR+Y     + + D R  +   K++ VL G +D  I P L 
Sbjct: 243 DAAEALKKDI---DFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 298


>gi|217963389|ref|YP_002349067.1| peptide chain release factor 2, programmed [Listeria monocytogenes
           HCC23]
 gi|217332659|gb|ACK38453.1| peptide chain release factor 2, programmed [Listeria monocytogenes
           HCC23]
          Length = 304

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 92/290 (31%), Positives = 157/290 (54%), Gaps = 10/290 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGD 68
           ++ R AE+E +M +    +      +     +        +   ++E++ +     ++ +
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +    +L +     +              L+  D  D  + ILE+  G GG+E+  +
Sbjct: 61  EADEDLQEELEKDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+T
Sbjct: 176 SPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMT 235

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           HIP+GI+V   SE+SQ +NR +AMK+L+ +LY  E++    E +  R  Q
Sbjct: 236 HIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 285


>gi|86159138|ref|YP_465923.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775649|gb|ABC82486.1| bacterial peptide chain release factor 2 (bRF-2) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 309

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 105/298 (35%), Positives = 153/298 (51%), Gaps = 13/298 (4%)

Query: 53  DQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            +   + Q L+ +  +   D   R  A     A+ +++  LE +           D    
Sbjct: 9   RRSLDDAQALNELAEEAR-DEATRAEAAEAAEAVGRQLEGLELQKM----LSGPHDAAGA 63

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
           I+E+++G GG EA  +   L+RMY RY   R W+VE       ++ G       + G   
Sbjct: 64  IVEVKSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHP 123

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASG 231
           +  +K E GVHR+ R+   + + R  TS A V V PE  +  V    E D+RIDT R+SG
Sbjct: 124 YGWLKAERGVHRLVRISPFDQNARRQTSFAAVDVTPEIDDDIVIDIKEADVRIDTYRSSG 183

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQ VN TDSAVR+TH+PTGI+V   +E+SQ +NR  A K+LRA+LYD+E K+ A  R 
Sbjct: 184 AGGQKVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRNVAWKILRAKLYDLEEKKRAAARD 243

Query: 291 ANR--KLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           A    K  I   D   +IR+Y     + + D R  +   K++ VL G +D  I P L 
Sbjct: 244 AAEALKKDI---DFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 298


>gi|145347488|ref|XP_001418196.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578425|gb|ABO96489.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 278

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 6/258 (2%)

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
                L     D    +L+I AG GG +A  +   L RMY  +   R + V      + +
Sbjct: 19  WELRRLLGGKYDAFGAVLQIYAGAGGLDAQDWTEMLERMYLGWCEKRGFAVRATERLEGE 78

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV---LPEAAEI 213
            GG K     + GR  +  +  E G HR+ R           TS A V V     E  E 
Sbjct: 79  GGGLKTATLEVEGRYAYGYLSSEKGTHRLVRQSPFNKDAARQTSFAAVDVIPLFEEDMEE 138

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
            V +P  D+ + TMR+ G+GGQ+VN  ++AVRI HIPTGI V     ++Q  NR  AM  
Sbjct: 139 VVKVPDTDLEVTTMRSGGAGGQNVNKVETAVRIKHIPTGITVKAEEHRTQQLNRQAAMLR 198

Query: 273 LRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYV 331
           ++A+L  +  +    + +  R   I   +  ++IR Y     + + D R  +       V
Sbjct: 199 IKAKLTALAEEARVADIAELR-GDIVKAEWGQQIRNYVLHPYKLVKDVRTGVETSDANKV 257

Query: 332 LQGYIDDIINPLLTAHQA 349
           L G +D+ +N  L    A
Sbjct: 258 LNGALDEYMNGYLRWKAA 275


>gi|68171151|ref|ZP_00544559.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999421|gb|EAM86062.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 221

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 78/221 (35%), Positives = 126/221 (57%), Gaps = 9/221 (4%)

Query: 131 DLFRMYERYAA-LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
            LFRMY R+A     +K E++   D ++ G K     + G   +   K ESG+HR+ R+ 
Sbjct: 1   MLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRIS 60

Query: 190 ATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
              ++ + HT+ +++ V P    + +++I  +D+RIDT RASG+GGQHVN T+SAVRITH
Sbjct: 61  PFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITH 120

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN--RKLQIGSGDRSER 305
           IP+GI+V   + +SQHQN   A  +L++RLY ++ +    + +    ++  IG G+   +
Sbjct: 121 IPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGN---Q 177

Query: 306 IRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           IR+Y     + + D R    +  +  VL G +D  I   LT
Sbjct: 178 IRSYVMHPYQMVKDIRTGHEIGNVNSVLDGNLDSFIISALT 218


>gi|265991893|ref|ZP_06104450.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263002901|gb|EEZ15252.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 133

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 89/131 (67%), Positives = 112/131 (85%)

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           MRASG+GGQHVNTTDSAVRITHIPTGIMV  +EKSQHQNR RAM++LRARLYD+ER++  
Sbjct: 1   MRASGAGGQHVNTTDSAVRITHIPTGIMVVQAEKSQHQNRARAMQILRARLYDMERQKAE 60

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +ERS  R+ Q+GSGDRSERIRTYNF QGR+TDHRINLTLYKL+ V++G +D++++ L++ 
Sbjct: 61  SERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGELDELVDALISD 120

Query: 347 HQAKMIGSASE 357
           HQ  ++    E
Sbjct: 121 HQTALLAELGE 131


>gi|315254829|gb|EFU34797.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1]
          Length = 155

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 78/144 (54%), Positives = 108/144 (75%), Gaps = 1/144 (0%)

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
            DI   D+RIDT R+SG+GGQHVNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL
Sbjct: 10  PDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVL 69

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
            AR++  E  +     ++ R+  +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+ V++
Sbjct: 70  GARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME 129

Query: 334 GYIDDIINPLLTAHQAKMIGSASE 357
           G +D +I P++  HQA  + + SE
Sbjct: 130 GKLDMLIEPIIQEHQADQLAALSE 153


>gi|60279679|ref|NP_001012512.1| peptide chain release factor 1, mitochondrial [Danio rerio]
 gi|58701973|gb|AAH90173.1| Zgc:113104 [Danio rerio]
          Length = 235

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 7/233 (3%)

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           +F MY+ +A+ + W  E+ + +  + GG       +SG  VF  +KFE G HRVQR+P  
Sbjct: 1   MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60

Query: 192 EASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
             S R+   HT   TV VLP+  E+D+DI  +D+RIDT R+ G+GGQHVNTTDSAVR+ H
Sbjct: 61  GLSSRMQRIHTGTMTVIVLPQMEEVDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLVH 120

Query: 249 IPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           +PTG +      +SQ +NR  A++VLRARL+     +   +    R+LQ+G+  +SERIR
Sbjct: 121 LPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQREQTHTARRLQVGTRAQSERIR 180

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLT-AHQAKMIGSASE 357
           TYNF+Q R+TDHRI      ++  ++G   ++D++  L     + +++    +
Sbjct: 181 TYNFTQDRVTDHRIGFVTRDIKEFMRGAEGLEDLLRLLQENQDREELLKLLKD 233


>gi|293977889|ref|YP_003543319.1| bacterial peptide chain release factor 2 [Candidatus Sulcia
           muelleri DMIN]
 gi|292667820|gb|ADE35455.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Sulcia
           muelleri DMIN]
          Length = 345

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 95/350 (27%), Positives = 175/350 (50%), Gaps = 21/350 (6%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYI-KLTEE-YAAISPIISKISIYDQKKQ--- 57
            ++  +I  +  +  EI   +        Y  +L +E +     I    +++ +KKQ   
Sbjct: 1   MVTKSKIDKISIKLKEIYYYL---NIEQKYRSRLEKESHNFCKKIKKSNTLFFKKKQILN 57

Query: 58  ---EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
                + L   +          ++ ++E+  I  +I +  ++I +       +D+ + +L
Sbjct: 58  YFYSIKVLLNELKILLEFFPYGEVTELEIDFIYNKIEKFFSKIEFTKFFFGKEDNLNAVL 117

Query: 115 EIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFS 174
           +I AG GG+E+  +   L+RMY  +A    +K++ ++S   D  G + I   + G   F 
Sbjct: 118 QISAGAGGTESCDWASMLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFG 177

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSG 233
            +K E+GVHR+ R+   + S + HTS A+V + P    +I++ I   DI  +T R+ GSG
Sbjct: 178 YLKGENGVHRLVRISPFDNS-KRHTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSG 236

Query: 234 GQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ+VN  +S VR+ H PT I++  S  KSQ  N+++A+K+L++RL+ +E+K   ++ +  
Sbjct: 237 GQNVNKVESGVRLHHHPTNIIIENSETKSQFNNKIKALKLLKSRLFYIEKK---SKNTTC 293

Query: 293 RKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341
            K +I   + S +IR Y     + + D R       +E VL G ID  + 
Sbjct: 294 IKKKI---EWSSQIRNYIMHPYKLVKDLRTGYETSDIESVLNGEIDIFLK 340


>gi|195973774|gb|ACG63452.1| peptide chain release factor 2 [Francisella noatunensis]
 gi|198417115|gb|ACH87844.1| PrfB [Francisella noatunensis subsp. noatunensis]
          Length = 294

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L  +   +  I+       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENIVHNCEHISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQH+N TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RIT 317
           RI 
Sbjct: 292 RIK 294


>gi|225624841|gb|ACN96555.1| PrfB [Francisella noatunensis subsp. orientalis]
          Length = 294

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 95/303 (31%), Positives = 157/303 (51%), Gaps = 17/303 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L  +   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L I++G+GG+EA  +   L RMY R
Sbjct: 55  LIQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A  + +KV V   SD D  G K     I G   +   + E+G+HR+ R    +++ + H
Sbjct: 115 WADSQGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RIT 317
           RI 
Sbjct: 292 RIK 294


>gi|195973770|gb|ACG63450.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L  +   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RIT 317
           RI 
Sbjct: 292 RIK 294


>gi|167842465|gb|ACA03160.1| RF2 [Dictyostelium fasciculatum]
 gi|328868131|gb|EGG16511.1| class I peptide chain release factor [Dictyostelium fasciculatum]
          Length = 425

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 175/351 (49%), Gaps = 20/351 (5%)

Query: 10  CDLKNRFAEIE----LRMSESPSVDAYI--KLTEEYAAISPIISKISIYDQKKQEEQDLH 63
             +K R  E++      + +  ++D      L +EY  I   + +I     + ++  +L 
Sbjct: 78  KKMKIRLKELQPIHDRSLVDITTIDQNDTGSLLKEYNHIRVQVDQIDQLPVQFKDYLELV 137

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +         +++        + +        + +  L  +  D+ S  +EI AG GG+
Sbjct: 138 KMAKTAGDREMMQEAQSTTEQLMSQCNE-----LEFKSLMSNDMDNDSAYMEIHAGAGGT 192

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           ++  +   L  MY ++A+ R +  +++  S  D  GYK+++  ISG   +   + E+GVH
Sbjct: 193 DSMDWTQMLSSMYIKWASRRGFDAQIIDESHGDICGYKKVILKISGPYAYGWTRTENGVH 252

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAAEIDV---DIPLEDIRIDTMRASGSGGQHVNTT 240
           ++ R+     +G+ HTS A+V V P +   +    D+   D+ I+TMR+SG+GGQH N T
Sbjct: 253 KLIRMSPFNTNGKRHTSFASVFVYPSSDADEKVAVDLVSRDLVIETMRSSGAGGQHTNKT 312

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG- 298
           +SAVRITH P+G+ V  S E+SQH+N+  AM +L+++L  +E ++   +    R  Q+G 
Sbjct: 313 ESAVRITHTPSGLSVNISQERSQHKNKQIAMDLLKSKLLSLELRKRDEQEKNLRSEQMGI 372

Query: 299 SGDRSERI-RTYN-FSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLT 345
           +G  S  I R Y    Q RI D R        E  LQG   +D +I  +L+
Sbjct: 373 NGFGSGSINRVYTQHPQTRIKDQRTGQESSNFEEFLQGGEELDQMIKEVLS 423


>gi|195973766|gb|ACG63448.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 94/303 (31%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    +       L  +   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWNNPEYAQNLGRQKVELENVVHNCEYISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RIT 317
           RI 
Sbjct: 292 RIK 294


>gi|195973762|gb|ACG63446.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|195973768|gb|ACG63449.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 94/303 (31%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L  +   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     + G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RIT 317
           RI 
Sbjct: 292 RIK 294


>gi|195973764|gb|ACG63447.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L  +   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +E+     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQEVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     + G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RIT 317
           RI 
Sbjct: 292 RIK 294


>gi|195973772|gb|ACG63451.1| peptide chain release factor 2 [Francisella noatunensis subsp.
           orientalis]
          Length = 294

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 95/303 (31%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D       L  +   +  ++       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L I++G+GG+EA  +   L RMY R
Sbjct: 55  LIQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A  + +KV V   SD D  G K     I G   +   + E+G+HR+ R    +++ + H
Sbjct: 115 WADSQGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D R+DT RASG+GGQHVN TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADXRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RIT 317
           RI 
Sbjct: 292 RIK 294


>gi|224001842|ref|XP_002290593.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335]
 gi|220974015|gb|EED92345.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335]
          Length = 282

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 107/237 (45%), Positives = 150/237 (63%), Gaps = 15/237 (6%)

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAAL----------RKWKVEVLSSSDNDDGGY 160
             +++IRAGTGG EA LF  ++   YE  A            + W +E LS S  D GG 
Sbjct: 48  DAVIDIRAGTGGDEACLFASEILACYEATAKAGGADESGNGGKSWDLEFLSLSRTDLGGI 107

Query: 161 KEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI--DVDIP 218
           KE    +   G +   ++ESGVHRVQRVP  +   ++ TSA +VAVLP   +      +P
Sbjct: 108 KEASLILKQLGPYGFFQYESGVHRVQRVPVNDN--KLQTSAVSVAVLPSVPDSLIAEALP 165

Query: 219 LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARL 277
             +++I+TMRASG+GGQHVNTT+SAVR+THIPTGIM     E+SQH+N+ +A+K++ +R+
Sbjct: 166 PTELKIETMRASGAGGQHVNTTESAVRVTHIPTGIMAYMQEERSQHKNKAKALKLVASRV 225

Query: 278 YDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           Y + +++    RSA R   +G GDRSERIRTYNF Q RITDHR  +++  ++  L G
Sbjct: 226 YALRKEQERKNRSAARSSLMGGGDRSERIRTYNFPQDRITDHRCKVSVQGVQSWLGG 282


>gi|326493842|dbj|BAJ85383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 70/224 (31%), Positives = 113/224 (50%), Gaps = 9/224 (4%)

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R+   +++K  V+  S  ++ G K     + GR  +  +  E G HR+ R     A G  
Sbjct: 13  RWGGKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 72

Query: 198 HTSAATVAVLPEAAEIDVD--IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            TS A V V+P   E  +D  IP ED+ I   RA G GGQ+VN  ++AVR+ HIPTGI V
Sbjct: 73  QTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 132

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
             + E+SQ  N+++A++ L+A+L  +  ++ A+E    R   +   +  ++IR Y F   
Sbjct: 133 RCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQIRNYVFHPY 191

Query: 315 R-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           + + D R       +  V+ G +D  I   L       + +A+E
Sbjct: 192 KLVKDVRTACETSDISGVMDGELDPFIKAYLQY----KLSAAAE 231


>gi|323446989|gb|EGB02968.1| hypothetical protein AURANDRAFT_12526 [Aureococcus anophagefferens]
          Length = 305

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 128/305 (41%), Positives = 184/305 (60%), Gaps = 26/305 (8%)

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT-DDDKSCILEIRAGTGGSEAALFVG 130
           D+E+RD A+ E   +  ++  L +++   LLP+D  DD  +C++E++A  GG EA+LF G
Sbjct: 3   DAELRDEARRERELLTPKVATLAHDLTAKLLPRDAVDDAPACLVEVKAAAGGDEASLFAG 62

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           DL  MYER+A  R+   ++LS + +D GG     A + G G +  ++FESGVHRVQRVP 
Sbjct: 63  DLLAMYERFAGRRRHGWDLLSVTKSDCGGVSHAYAEVKGPGAYGALRFESGVHRVQRVPR 122

Query: 191 TEASGRVHTSAATVAVLP---EAAEIDVDIPLEDIRIDTMRASGSGGQH----------- 236
            +   R+HTS A+V V P   E     VD    ++RIDT RASG+GGQH           
Sbjct: 123 NDV--RIHTSTASVVVFPAGAEDRGATVDFDPAELRIDTFRASGAGGQHATTRMEIFNPT 180

Query: 237 -------VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
                  VNTT+SAVR+TH+PTG +V+   E+SQH+N+ +A+KVL +R+   +    A  
Sbjct: 181 SMRAYQNVNTTNSAVRVTHLPTGTVVSIQDERSQHRNKAKALKVLASRVVGAQAAAAAAA 240

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY-IDDIINPLLTAH 347
           RSA+R    GSGDR+ERIRTYN    R+TDHR   T   ++ VL+G  +DD++  L  A 
Sbjct: 241 RSASRAKLAGSGDRAERIRTYNAPHDRVTDHRSGFTANSVDRVLRGDLLDDVVASLEAAD 300

Query: 348 QAKMI 352
           +   +
Sbjct: 301 RDARM 305


>gi|237830659|ref|XP_002364627.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|211962291|gb|EEA97486.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|221507504|gb|EEE33108.1| peptide chain release factor, putative [Toxoplasma gondii VEG]
          Length = 545

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 102/252 (40%), Positives = 144/252 (57%), Gaps = 5/252 (1%)

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
             +LEI+AG GG +AALF  DL  MYE ++  R W   VL   + + GGY+   A + G 
Sbjct: 278 DAVLEIQAGVGGEDAALFSRDLLGMYEAFSLARGWVFRVLDIQETEKGGYRRASAQVEGP 337

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE--IDVDIPLEDIRIDTMR 228
             F  +  E+G+HRVQRVP TEA GR+ TSA  V VLP +      +D+    ++ID MR
Sbjct: 338 DAFRLLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPRSGNLEDKIDLSPPTLKIDFMR 397

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG GGQ VN +++AVRITH PTG+ V     +SQ +N+  A+++LRA+L     ++ + 
Sbjct: 398 ASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQMENKSLALELLRAQLLQQLMRQASE 457

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ--GYIDDIINPLLT 345
           ER      Q GS DRSE+IRTYNF +  +TDHR  + +  +E  L     + +I   L  
Sbjct: 458 ERGRALDAQKGSKDRSEKIRTYNFQRDVVTDHRCRMHVNGVEEFLDSSDGLFEIHEVLKR 517

Query: 346 AHQAKMIGSASE 357
             +   +    E
Sbjct: 518 QREDMQLAGLLE 529


>gi|145627802|ref|ZP_01783603.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
 gi|144979577|gb|EDJ89236.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
          Length = 183

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 7/184 (3%)

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRID 225
           +SG   F  ++ E+G+HR+ R    +++ R HTS +   V PE  +         D+RID
Sbjct: 1   MSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRID 60

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
             RASG+GGQHVN T+SAVRITH+P+GI+V   +++SQH+N+ +AMK L+A+LY++E ++
Sbjct: 61  VYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQK 120

Query: 285 MANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINP 342
              ++    + K  IG G    +IR+Y     RI D R  +     + VL G +D  I  
Sbjct: 121 KNADKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEA 177

Query: 343 LLTA 346
            L A
Sbjct: 178 SLKA 181


>gi|195973776|gb|ACG63453.1| peptide chain release factor 2 [Francisella noatunensis]
          Length = 294

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 94/303 (31%), Positives = 157/303 (51%), Gaps = 17/303 (5%)

Query: 22  RMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
            + +    D          +   +  I+       +  +          +    +E  + 
Sbjct: 2   ELEDGSIWDNPEYAQNFGRQKVELENIVHNCEHISETLETL-------TELLELAEEDES 54

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
              E+    +++     ++ +  +     D  +  L+I++G+GG+EA  +   L RMY R
Sbjct: 55  LMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMR 114

Query: 139 YAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVH 198
           +A    +KV V   SD D  G K     I G   +  ++ E+G+HR+ R    +++ + H
Sbjct: 115 WADSHGFKVTVDDVSDGDVAGIKGCALKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRH 174

Query: 199 TSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
           TS A+V + PE   +ID++I   D+R+DT RASG+GGQH+N TDSAVRITHIPT I+V +
Sbjct: 175 TSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQS 234

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQG 314
            S++SQH+NR  AMK L+++LY++E ++   E++   + K  IG G    +IR+Y   Q 
Sbjct: 235 QSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWG---SQIRSYVLDQS 291

Query: 315 RIT 317
           RI 
Sbjct: 292 RIK 294


>gi|294949753|ref|XP_002786323.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239900543|gb|EER18119.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 423

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 99/374 (26%), Positives = 162/374 (43%), Gaps = 38/374 (10%)

Query: 9   ICDLKNRFAEIELRMSESPS------VDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           +  + N+  EI    +          VD  + +++E A +           + ++ +  +
Sbjct: 52  LKPVLNKLMEIRNAGNRPELAPYFSMVDEMLSVSDEIAKLE------QESAKLERNDISM 105

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++          + +     L      R     I+         D   C +EIR G GG
Sbjct: 106 KSMFNAEVDSQLEKIIEIENRLFDHLHTRMSNEGIDCATWHAYVKDASDCTVEIRPGVGG 165

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------------SG 169
            EA  +  D+F M ER+A +  W    +      + G++     I               
Sbjct: 166 VEAGKWCKDIFDMLERFAGIMGWAAPEVKV---MEQGWQSGYRQIIADFFLKPGVKRTPE 222

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIP----LEDIRID 225
           +G+F  +KFE+G+HRVQRVP+  A     TSA +V VLP        IP     E     
Sbjct: 223 KGIFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIPVLKPHEYKVWI 282

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T ++SG GGQ VN    AVRI HI +G+       ++   N+  A++ +  ++ + + K+
Sbjct: 283 TKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQVSQKIMEEKGKK 342

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL---YKLEYVLQGY--IDDI 339
           +A ER   RK  +GSGDRSE+IR+YN+  G + DHR+  +      LE ++ G   + DI
Sbjct: 343 IAKERGIIRKQHMGSGDRSEKIRSYNYLNGTVVDHRLPKSEDGPNALEEIMDGEGLLHDI 402

Query: 340 INPLLTAHQAKMIG 353
           I PL      + + 
Sbjct: 403 IEPLRLQEYRQRVQ 416


>gi|159462370|ref|XP_001689415.1| peptide chain release factor [Chlamydomonas reinhardtii]
 gi|158283403|gb|EDP09153.1| peptide chain release factor [Chlamydomonas reinhardtii]
          Length = 263

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 13/257 (5%)

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
                L     DD+   L I AG GG +A  +   L RMY R+A    ++V VL  +  D
Sbjct: 1   WELRRLLCGPYDDRGARLTISAGAGGVDAMDWAEMLERMYMRWAEAGGYQVAVLDRAAGD 60

Query: 157 DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP---EAAEI 213
           + G             +  ++ E G HR+ R     A G   TS A V V+P        
Sbjct: 61  EAGITGGR------HAYGYLRCEKGTHRLVRNSPFNAKGLRQTSFAGVDVMPVLGPDDLP 114

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++D+  +D+ I TMR+ G GGQ+VN  ++ VRI H+PTG+ V  + E+SQ QN+  A+ +
Sbjct: 115 ELDLNEKDLEITTMRSGGKGGQNVNKVETGVRILHVPTGLAVKCTQERSQAQNKAIALDL 174

Query: 273 LRARLYDVERKRMANERSANRKLQIGSGD-RSERIRTYNFSQGR-ITDHRINLTLYKLEY 330
           L+ARL    R+    E + +R   +   +  + R++   F   + + D R       ++ 
Sbjct: 175 LKARLLANSREPPMEE-AGSRMGAVADCNTHAHRVQGCLFHPYKLVKDTRTGTETSDVQA 233

Query: 331 VLQGYIDDIINPLLTAH 347
           V+ G +   +  +L   
Sbjct: 234 VMDGELGGFMAAVLRQR 250


>gi|253795640|ref|YP_003038736.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia
           cicadicola Dsem]
 gi|253739948|gb|ACT34283.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia
           cicadicola Dsem]
          Length = 240

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 109/231 (47%), Positives = 149/231 (64%), Gaps = 1/231 (0%)

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
           +LE+RAG GG EA LF   L RMYER+AA  +W+V +   S   DGG K  VA + G GV
Sbjct: 1   MLELRAGVGGREAGLFASQLLRMYERFAAKMRWRVTLTEVSFGCDGGIKRAVADVVGEGV 60

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASG 231
              +  E+GVHRVQRVP TE  GRVHTS  T+A+LP A    ++ +   D++I+TMRASG
Sbjct: 61  GLWLAHEAGVHRVQRVPKTETRGRVHTSTVTLALLPSAGASCELGLLNSDLKIETMRASG 120

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           +GGQHVNTTDSAVRITH+PTG+   +S +SQHQNR  A+K+LR R+        A + + 
Sbjct: 121 AGGQHVNTTDSAVRITHLPTGVTACASCRSQHQNRAMALKLLRERVAARALSNAAADAAG 180

Query: 292 NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINP 342
            R  Q+  G R+ R RTY+F   ++TDH++  ++  +  VL G +  ++  
Sbjct: 181 VRAAQVADGARAHRARTYSFVMDKVTDHKLGRSVVGVARVLDGELQLLVRA 231


>gi|332027664|gb|EGI67732.1| Peptide chain release factor 1-like, mitochondrial [Acromyrmex
           echinatior]
          Length = 406

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 116/295 (39%), Positives = 170/295 (57%), Gaps = 15/295 (5%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            ++  I       Q++ ++  +  +              +L  E+     E  ++ +L  
Sbjct: 95  QLVENIQNLHNLGQQDIEIKKLADEE------------TMLYKEQLNELDERLLHMILTN 142

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
              D   + I+EI AG GG EA LFV DL+ MY  YA       EV+     D+ G + +
Sbjct: 143 MCKDFYSNIIIEITAGVGGQEAMLFVKDLYDMYIDYAKCLDLDHEVIDIEMTDNKGIRHV 202

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
              ISG  V  + + E GVHRVQRVPATE SGRVHTS A+VA+LP  +EI + I   D++
Sbjct: 203 SIMISGDQV-DKFQHEGGVHRVQRVPATEKSGRVHTSTASVAILPVPSEIQIMINENDLK 261

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVER 282
           I+T R+SG+GGQHVNTTDSAVRITH+P+G  +    ++SQ++N+  AM  LR+ LY+ + 
Sbjct: 262 IETKRSSGAGGQHVNTTDSAVRITHLPSGLSVTCQVDRSQNRNKKIAMDKLRSILYEQQL 321

Query: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLT-LYKLEYVLQGYI 336
            +  +  S  R+ Q+G G R+E+IRTYN++Q R+TDHR+     + L   +QG I
Sbjct: 322 NKQTSFTSKLRQKQMGMGFRNEKIRTYNYNQNRVTDHRLGQNGTFNLIEFMQGGI 376


>gi|307128661|ref|YP_003880691.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI]
 gi|306483123|gb|ADM89993.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI]
          Length = 337

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 145/269 (53%), Gaps = 7/269 (2%)

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           EI+ L + E++    +I+   N+I   ++    +   + I++I  G GG+E+  +V  L+
Sbjct: 58  EIKSLKKRELINKLNKIKNFINQIESQIIFTKKEYKLNAIIQITPGAGGTESCDWVSMLY 117

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           RMY  +A    + ++ L +   D GG K I+  + G   F  +K E+GVHR+ R+   + 
Sbjct: 118 RMYTMWAEKNNYSIKELYNLQGDVGGLKYILFEVQGFSPFGFLKGENGVHRLVRISPFDN 177

Query: 194 SGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           S + HTS A+V + P    +I + I   DI+  T R+ GSGGQ+VN  ++ VR+ H PT 
Sbjct: 178 S-KRHTSFASVYIYPLINDDIKIKINNSDIKWSTFRSGGSGGQNVNKVETGVRLHHKPTN 236

Query: 253 IMVTS-SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
           I++ +   +SQ +N+ +A+K+L++RLY +E++     R  N+  +I  G    +IR Y  
Sbjct: 237 IIIENTETRSQIKNKTKALKLLKSRLYYIEKQNKNIIRKKNKLKKIEWG---SQIRNYIM 293

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDI 339
              + + D +       +  V+ G +++ 
Sbjct: 294 HPYKLVKDLKTGYETSNINSVMDGNLNNF 322


>gi|73667063|ref|YP_303079.1| class I peptide chain release factor domain-containing protein
           [Ehrlichia canis str. Jake]
 gi|72394204|gb|AAZ68481.1| Class I peptide chain release factor domain [Ehrlichia canis str.
           Jake]
          Length = 173

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 106/157 (67%), Positives = 129/157 (82%), Gaps = 1/157 (0%)

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           MKFESGVHRVQRVP TEASGR++TSAATVAVLPE  E+D+ I  +D+RID  R+SG GGQ
Sbjct: 1   MKFESGVHRVQRVPETEASGRLYTSAATVAVLPEIEEVDLKIDEKDLRIDVYRSSGPGGQ 60

Query: 236 HVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
            VNTTDSAVRITHIP+GI+V   ++     + +A+KVLRARLY++E+++  +E S  RK 
Sbjct: 61  SVNTTDSAVRITHIPSGIVVIQRDEKSQH-KNKALKVLRARLYNLEKQKRDSEISQMRKS 119

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           QIGSGDRSERIRTYNF Q RITDHRINLTLY+LE ++
Sbjct: 120 QIGSGDRSERIRTYNFPQSRITDHRINLTLYRLEDIM 156


>gi|307176123|gb|EFN65821.1| Peptide chain release factor 1-like, mitochondrial [Camponotus
           floridanus]
          Length = 412

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 119/357 (33%), Positives = 189/357 (52%), Gaps = 24/357 (6%)

Query: 9   ICDLKNRF-----AEIELRMSESPSVD--AYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           + D   R+      E +   S+S   +      +       + ++  I       +++ +
Sbjct: 58  LEDKIRRYLDYVTKEYKNEASKSNFFEFIDLKTVGHLLDDRTHLVENIQNLQDLAKQDVE 117

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +  +  +               L  E+     E  ++ +L+    +   S I+EI AG G
Sbjct: 118 MKKLAKEEE------------TLYKEQLNELDERLLDNILINICKESYDSIIIEITAGVG 165

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LFV DL+ MY  YA       EV+    ND+ G + +   +SG   +   ++E G
Sbjct: 166 GQEAMLFVKDLYEMYMGYAKYLDLTHEVIDMETNDNNGIRHVSILLSGDETYKL-QYEGG 224

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           VHRVQR+PATE SGRVHTS A+VA+LP  +++ + I  +D++I+T RASG+GGQHVNTTD
Sbjct: 225 VHRVQRIPATERSGRVHTSTASVAILPTPSKVQIVINDKDLKIETKRASGAGGQHVNTTD 284

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRI ++P+G+ V     +SQ +N+  AM  LR+ LY+ +  +     S  R+ Q+G  
Sbjct: 285 SAVRIIYLPSGLSVSCQMHRSQIKNKEVAMIKLRSILYEQQLNKQTTFISELRQKQMGMK 344

Query: 301 DRSERIRTYNFSQGRITDHRI-NLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGS 354
            R+E++RTYN++Q R+TDHR+ N T+Y L   +QG   ++ +   L    Q K +  
Sbjct: 345 SRNEKVRTYNYNQDRVTDHRLQNGTMYNLPEFMQGGVALEKLEERLHKDIQMKTLLE 401


>gi|225685111|gb|EEH23395.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb03]
          Length = 316

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 105/268 (39%), Positives = 151/268 (56%), Gaps = 26/268 (9%)

Query: 93  LENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVL-- 150
           L   +   L+P+    D  C+LE+R G GG EA +F  +L RMY  + A R  +  +L  
Sbjct: 7   LSENLKQALIPRHPFADLPCLLELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKK 66

Query: 151 -SSSDNDDGGYKEI----VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
            S +    GG ++     V  I   G +  ++ E+GVHRVQRVPATE+ GR HTSA +V 
Sbjct: 67  ESENAGASGGSEDRLAEAVMEIETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVV 126

Query: 206 VLPEAAEIDVD---------------IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +LP       +               I  +++ ++ MRASG+GGQHVN T+SA+R+THIP
Sbjct: 127 ILPSFPRNGEEGDGELNFDDPNSDFYIDPQEVNVEKMRASGAGGQHVNKTESAIRLTHIP 186

Query: 251 TGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ---IGSGDRSERI 306
           TGI+V     +SQH+NR +A ++LRAR+    R+    E    R+     +G   R ++I
Sbjct: 187 TGIVVGMQDSRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRRGAMGGVGKMGRGDKI 246

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQG 334
           RTYNF Q R TDHR  LTL+ L  +++G
Sbjct: 247 RTYNFGQNRCTDHRSGLTLHNLVNIMEG 274


>gi|116515195|ref|YP_802824.1| hypothetical protein BCc_269 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257049|gb|ABJ90731.1| peptide chain release factor RF-2 [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 365

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 93/277 (33%), Positives = 155/277 (55%), Gaps = 7/277 (2%)

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           E       E+    K I+     +   ++    +D  +C L+I++G+GG E+  +   L 
Sbjct: 90  ENDINILKEINIQYKAIKNKIYVLESYMMFNHKNDKNNCYLDIQSGSGGLESQDWTKMLL 149

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           +MY +Y   +K+  +++S +  D+GG K I  +I G+  F  ++ E+G+HR+ R    +A
Sbjct: 150 KMYLKYLYKKKFVTKIISETVGDNGGIKSITLSIKGKFAFGWLRTETGIHRLVRKSPFDA 209

Query: 194 SGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
             + HT+ +++ V P     ID+++  +++RID  R+SG+GGQHVN T+SAVRITH+PTG
Sbjct: 210 GKKRHTTFSSIFVYPALTNNIDINLQSKNLRIDVYRSSGAGGQHVNRTESAVRITHLPTG 269

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK--LQIGSGDRSERIRTY 309
           I+    + +SQH+N+  A+K L+A+LY++E K+   E+    K    I SG+   +IR+Y
Sbjct: 270 IVTQCQNSRSQHKNKNTAIKQLKAKLYEIEIKKKKIEKKKINKKKSNIRSGN---QIRSY 326

Query: 310 NFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
                RI D R  L    +  VL G I + I   L  
Sbjct: 327 ILDDSRIKDMRTKLERKDINNVLNGDIHEFIKKSLKM 363


>gi|66805655|ref|XP_636549.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
 gi|60464924|gb|EAL63039.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
          Length = 424

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 186/351 (52%), Gaps = 26/351 (7%)

Query: 11  DLKNRFAEIEL-RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +  RF E++L  M ES        +          I++I  Y+Q KQ  ++L+ +  + 
Sbjct: 83  AIFKRFEEMKLPEMIESGIGIDASNM--------DTINQIKNYNQTKQSIEELNLLSKEF 134

Query: 70  NSDSEIRDLAQIEVLAI--------EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           N   E+ ++++                ++    +E+    L    DD K C+LEI+AG G
Sbjct: 135 NDYLEVVEMSKNIGDNDWLKETRSLINQLFSNCSELEVKALMNGKDDSKGCLLEIQAGAG 194

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G+++  +   LF MY ++ A + + VE++  + + + GY+     I G   +  ++ E G
Sbjct: 195 GNDSMDWTKILFEMYCKWGARKGYNVEIID-TADGEFGYRHASLKIDGHNAYGWLRTEMG 253

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTT 240
           +HR+ R+    +SG+ HTS A+V V P + +   ++I  +D+  +T+R+SG+GGQHVN T
Sbjct: 254 IHRLIRISPFSSSGKRHTSFASVVVYPISDDSIKINIDPKDLHFETLRSSGAGGQHVNKT 313

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           +SAVRI HIPTGI V +SSE+SQHQN+   + +L+++LY  E K+      + R  ++G 
Sbjct: 314 ESAVRIVHIPTGISVLSSSERSQHQNKSNGLLLLKSKLYSHELKKKIEAEKSFR-DELGK 372

Query: 300 GDRS--ERIRTYNFSQG-RITDHRINLTLYKLEYVLQG--YIDDIINPLLT 345
              +    +R Y+     R+ D R  + + ++  +L G   +D++I   L+
Sbjct: 373 NSWASDSVVRNYSMHPQERVKDQRTGIEVLQISKILDGEEELDNMIKKALS 423


>gi|266622716|ref|ZP_06115651.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
 gi|288865539|gb|EFC97837.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
          Length = 275

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 98/273 (35%), Positives = 159/273 (58%), Gaps = 4/273 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    +   K T+       +   ++ Y   +Q+ +D+  +I   N +++   + ++E
Sbjct: 1   MEEPGFWEDPEKSTKIVQLAKNLKDTVNGYKDLEQQYEDIGVMIEMGNEENDPSVVPEVE 60

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAAL 142
            +  E + +  E  IN LL  +   D  + IL + AG GG+E+  +   L+RMY R+A  
Sbjct: 61  EMLKEFKDKLEEIRINTLLSGEYDSD--NAILRLNAGAGGTESCDWCSMLYRMYCRWAEK 118

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
           + + VEVL   D ++ G K +   I+G   F  +K E GVHR+ R+    A+G+  TS  
Sbjct: 119 KGYSVEVLDYLDGEEAGIKSVTIQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFV 178

Query: 203 TVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEK 260
           +  V+P+  E  DVDI  ED+RIDT R+SG+GGQH+N T SA+RITH+PTGI+V   +E+
Sbjct: 179 SCDVMPDIEEDLDVDINEEDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNER 238

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           SQ QN+ +AM++L+A+LY ++++  A + S  R
Sbjct: 239 SQFQNKDKAMQMLKAKLYMLKQQENAEKLSDIR 271


>gi|242021553|ref|XP_002431209.1| peptide chain release factor, putative [Pediculus humanus corporis]
 gi|212516458|gb|EEB18471.1| peptide chain release factor, putative [Pediculus humanus corporis]
          Length = 413

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 94/320 (29%), Positives = 163/320 (50%), Gaps = 9/320 (2%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELEN 95
           +++ + +    S        + +  +      +     EIR     +     + +     
Sbjct: 48  SQDLSDLYDNESMKKYISFIESDHVNFSDNFLEKKYIEEIRHSIDKKKEIECEILALNTV 107

Query: 96  EINYLLLPKDTDDDKSCILEIR--AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSS 153
                +LP + D  +   +EI      GG EA  F  +LF MY  Y   + W        
Sbjct: 108 NSEEKILPHNFDGGEESQIEIHIFPAVGGEEAKYFAEELFNMYVNYIIYKNWNCIRAEIK 167

Query: 154 DNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEI 213
            +   G+     T+ G  +++ +  E+GVHRVQRVP TE  GR HTS  ++ +  ++   
Sbjct: 168 QDTKVGH----LTLQGNTIYNSLICEAGVHRVQRVPETEKFGRTHTSTCSLNIFQKSLNN 223

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKV 272
           ++ I  +DI I+T+R+ G GGQ+VN  ++ VRI HIPTG+++ +   + Q++N+++A K 
Sbjct: 224 EIIINPKDIIIETLRSGGPGGQNVNKVETRVRIKHIPTGLIIESQESRYQYENKIKAFKK 283

Query: 273 LRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL 332
           L++ L ++   ++ + + A  K Q G+ D S++IRTYNF+Q RITDHRIN +LY ++  L
Sbjct: 284 LQSTLLNMYEDKINSSKKATLKDQTGNNDYSDKIRTYNFNQNRITDHRINYSLYNMDAFL 343

Query: 333 QG--YIDDIINPLLTAHQAK 350
            G   +DD+I  +      +
Sbjct: 344 SGGKELDDMIERVKQYKNRE 363


>gi|294894730|ref|XP_002774927.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239880702|gb|EER06743.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 272

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 88/265 (33%), Positives = 131/265 (49%), Gaps = 17/265 (6%)

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
                    D   C +EIR G GG EA  +  D+F M ER+A +  W    +        
Sbjct: 8   CATWHAYVKDASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEVKV------ 61

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIP 218
             ++ V     +G+F  +KFE+G+HRVQRVP+  A     TSA +V VLP        IP
Sbjct: 62  -MEQGVKRTPEKGIFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIP 120

Query: 219 ----LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVL 273
                E     T ++SG GGQ VN    AVRI HI +G+       ++   N+  A++ +
Sbjct: 121 VLKPHEYKVWITKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQV 180

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL---YKLEY 330
             ++ + + K++A ER   RK  +GSGDRSE+IR+YN+  G + DHR+  +      LE 
Sbjct: 181 SQKIMEEKGKKIAKERGIIRKQHMGSGDRSEKIRSYNYLNGTVVDHRLPKSEDGPNALEE 240

Query: 331 VLQGY--IDDIINPLLTAHQAKMIG 353
           ++ G   + DII PL      + + 
Sbjct: 241 IMDGEGLLHDIIEPLRLQEYRQRVQ 265


>gi|322499707|emb|CBZ34781.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 439

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 8/309 (2%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
             +D   K+      +   ++       K    ++   +      D          +   
Sbjct: 100 DELDIAEKVCAVLRQLDENVTLHDQLQSKSVRSREDEEIFDMAKEDIATLTDQLRVLEGE 159

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA-ALRKW 145
              +     E                 + +    GG EA+LF  +L  MY  YA   R W
Sbjct: 160 VNAV----MERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNW 215

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KV  +   D  +         + G GV+  M+ E GVH+VQRVP T+A+G++ TS A   
Sbjct: 216 KVRPVVKDDGSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFT 274

Query: 206 VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
           ++P    + VD+   D +ID +R SG GGQ + ++ + V +TH P+GI V     +S   
Sbjct: 275 MMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALG 334

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
           N+  A++ +  ++     K   +      + Q  SG+RS+++RTYN+ Q R+TDHRI   
Sbjct: 335 NKELALQTVAQQILVQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNYPQNRVTDHRIG-K 393

Query: 325 LYKLEYVLQ 333
            Y L   ++
Sbjct: 394 DYALSSFME 402


>gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum
           JPCM5]
 gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum
           JPCM5]
          Length = 439

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 8/309 (2%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
             +D   K+      +   ++       K    ++   +      D          +   
Sbjct: 100 DELDIAEKVCAVLRQLDENVTLHDQLQSKSVRSREDEEIFDMAKEDIATLTDQLRVLEGE 159

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA-ALRKW 145
              +     E                 + +    GG EA+LF  +L  MY  YA   R W
Sbjct: 160 VNAV----MERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNW 215

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KV  +   D  +         + G GV+  M+ E GVH+VQRVP T+A+G++ TS A   
Sbjct: 216 KVRPVVKDDGSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFT 274

Query: 206 VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
           ++P    + VD+   D +ID +R SG GGQ + ++ + V +TH P+GI V     +S   
Sbjct: 275 MMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALG 334

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
           N+  A++ +  ++     K   +      + Q  SG+RS+++RTYN+ Q R+TDHRI   
Sbjct: 335 NKELALQTVAQQILVQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNYPQNRVTDHRIG-K 393

Query: 325 LYKLEYVLQ 333
            Y L   ++
Sbjct: 394 DYALSSFME 402


>gi|1865700|emb|CAA67778.1| peptide release factor 2 [Bacillus firmus]
          Length = 282

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 89/272 (32%), Positives = 150/272 (55%), Gaps = 4/272 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   + R AE++  M+     D            + +  +++++ + +++ ++L     
Sbjct: 13  DLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYE 72

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +++     ++E    E   R   N+    LL  +  D  + ILE+  G GG+E+  
Sbjct: 73  LVKEEADEELEKELEAGVKELISRL--NDFELQLLLSEPYDKNNAILELHPGAGGTESQD 130

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R++  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R
Sbjct: 131 WASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVR 190

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   ++SGR HTS  +  V+PE    +++DI  ED+++DT RASG+GGQH+NTTDSA+RI
Sbjct: 191 ISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRI 250

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARL 277
           TH+PT  +V   SE+SQ +NR +AMK+L+A+L
Sbjct: 251 THLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 282


>gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 439

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/309 (26%), Positives = 136/309 (44%), Gaps = 8/309 (2%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
             +D   K+      +   ++       K    ++   ++     D          +   
Sbjct: 100 DELDIAEKVCVVLRQLDENVTLHDQLQSKSVRSREDEEILDMLKEDIATLTEQLRLLEGE 159

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA-ALRKW 145
              +     E                 + +    GG EA+LF  +L  MY  YA   R W
Sbjct: 160 VNAV----MERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRTYATEFRNW 215

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KV  +   D  +         +SG GV+  M  E GVH+VQRVP T+A+G++ TS A   
Sbjct: 216 KVRPVVKDDGSEA-ASSNEFQVSGEGVYRNMHHEIGVHKVQRVPVTDAAGKMQTSTAVFT 274

Query: 206 VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
           ++P    + VD+   D +ID +R SG GGQ + ++ + V +TH P+GI V     +S   
Sbjct: 275 MMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALG 334

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
           N+  A++++  ++     K   +      + Q  SG+RS+++RTYN+ Q R+TDHRI   
Sbjct: 335 NKELALQMVAQQILAQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNYPQNRVTDHRIG-K 393

Query: 325 LYKLEYVLQ 333
            Y L   ++
Sbjct: 394 DYALSSFME 402


>gi|296775660|gb|ADH42937.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 181

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 93/161 (57%), Positives = 120/161 (74%), Gaps = 2/161 (1%)

Query: 197 VHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT 256
           VHTSAATVA+LPEA ++D+ I   D+RID  R+SG GGQ VNTTDSAVRITH P+GI+VT
Sbjct: 20  VHTSAATVAILPEAEDVDIKINDSDLRIDVFRSSGPGGQSVNTTDSAVRITHGPSGIVVT 79

Query: 257 SSE-KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR 315
             + KSQH+N+ +A+K+LRARLY+ E+ +   +RS+ RK QIG+GDRSERIRTYNF QGR
Sbjct: 80  QQDEKSQHKNKAKALKILRARLYESEKLKKERQRSSERKSQIGTGDRSERIRTYNFPQGR 139

Query: 316 ITDHRINLTLYKLEYVLQGYI-DDIINPLLTAHQAKMIGSA 355
           +TDHRIN TL+KL   L G I +++   L    Q   + + 
Sbjct: 140 VTDHRINFTLHKLTDFLNGEIHEEMNENLRLKDQDLKLKAL 180


>gi|322801718|gb|EFZ22324.1| hypothetical protein SINV_03599 [Solenopsis invicta]
          Length = 300

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 115/281 (40%), Positives = 164/281 (58%), Gaps = 16/281 (5%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           Q++ ++  +  +               L   +     E  ++ +L     D   S I+EI
Sbjct: 1   QQDIEMKKLAEEEE------------ALYKGQLNELDERLLDIVLANMYKDFYDSIIIEI 48

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
            AG GG EA LFV DL+ MY  YA       E++     D+ G + +   ISG  V  + 
Sbjct: 49  TAGVGGQEAMLFVKDLYDMYLGYAKYLDLDHEIIDMEVTDNKGIRHVSVIISGNQV-DKF 107

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           + E GVHRVQRVPATE   RVHTS A+VA+LP  +EI + I  +D++I+T R+SG+GGQH
Sbjct: 108 QHEGGVHRVQRVPATERLSRVHTSTASVAILPVPSEIQIMINEKDLKIETKRSSGAGGQH 167

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VNTTDSAVRITH+P+G+ V     +SQ +NR  AM  L++ LY+ +  +  +  S  R+ 
Sbjct: 168 VNTTDSAVRITHLPSGVSVTCEVHRSQDKNRKMAMDKLKSVLYERQLNKQTSFTSELRQK 227

Query: 296 QIGSGDRSERIRTYNFSQGRITDHRINL--TLYKLEYVLQG 334
           Q+G G R+E+IRTYN++Q R+TDHR+    TLY L   +QG
Sbjct: 228 QMGMGFRNEKIRTYNYNQDRVTDHRLGQNGTLYNLAEFMQG 268


>gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 459

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 88/318 (27%), Positives = 143/318 (44%), Gaps = 15/318 (4%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
             +D   +L+     I+  I         +    D   ++     D         ++ + 
Sbjct: 111 DELDVSERLSAHLLKINDNIKLKDQLHSHETLSDDDRDILLMVEEDVRELVEKVRDMDSD 170

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA-ALRKW 145
              +      ++  L         +  LE+    GG EA+LF  +L  MY  YA  +R W
Sbjct: 171 VNAVMTRRLNLSDALGSCTN----TWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHW 226

Query: 146 KVEVLS--------SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
            V+V          SS     G   +   + G GV+  ++ E GVH+VQRVP T+  G++
Sbjct: 227 SVDVDGGEGDGEPVSSGGPAVGGNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKM 286

Query: 198 HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
            TS A V ++P    + VD+   D  I+ +R SG GGQ + ++ +AV +TH P+GI V  
Sbjct: 287 QTSTAVVTLMPVLDPVSVDVHERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKC 346

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRI 316
              +S   N+  A++++  +L     K   +        Q  SG+RS+++RTYN+ Q R+
Sbjct: 347 HQSRSALGNKELALQMVAQQLLVRRVKDQNSSLHETWCNQWSSGERSDKMRTYNYPQNRV 406

Query: 317 TDHRINLTLYKLEYVLQG 334
           TDHR+    Y L   L G
Sbjct: 407 TDHRLGRD-YSLGTFLDG 423


>gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei TREU927]
 gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei]
 gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 459

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 88/318 (27%), Positives = 144/318 (45%), Gaps = 15/318 (4%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
             +D   +L+     I+  I         +    D   ++     D         ++ + 
Sbjct: 111 DELDVSERLSAHLLKINDNIKLKDQLHSHETLSDDDRDILLMVEEDVRELVEKVRDMDSD 170

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA-ALRKW 145
              +      ++  L         +  LE+    GG EA+LF  +L  MY  YA  +R W
Sbjct: 171 VNAVMTRRLNLSDALGSCTN----TWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHW 226

Query: 146 KVEVLS--------SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
            V+V          SS     G   +   + G GV+  ++ E GVH+VQRVP T+  G++
Sbjct: 227 SVDVDGGEGDGEPVSSGGPAVGGNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKM 286

Query: 198 HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-T 256
            TS A V ++P    + VD+  +D  I+ +R SG GGQ + ++ +AV +TH P+GI V  
Sbjct: 287 QTSTAVVTLMPVLDPVSVDVHEKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKC 346

Query: 257 SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRI 316
              +S   N+  A++++  +L     K   +        Q  SG+RS+++RTYN+ Q R+
Sbjct: 347 HQSRSALGNKELALQMVAQQLLVRRVKDQNSSLHETWCNQWSSGERSDKMRTYNYPQNRV 406

Query: 317 TDHRINLTLYKLEYVLQG 334
           TDHR+    Y L   L G
Sbjct: 407 TDHRLGRD-YSLGTFLDG 423


>gi|24638472|sp|P96314|RF2_BACFI RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 294

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 89/272 (32%), Positives = 150/272 (55%), Gaps = 4/272 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +   + R AE++  M+     D            + +  +++++ + +++ ++L     
Sbjct: 25  DLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYE 84

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
               +++     ++E    E   R   N+    LL  +  D  + ILE+  G GG+E+  
Sbjct: 85  LVKEEADEELEKELEAGVKELISRL--NDFELQLLLSEPYDKNNAILELHPGAGGTESQD 142

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L RMY R++  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R
Sbjct: 143 WASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVR 202

Query: 188 VPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           +   ++SGR HTS  +  V+PE    +++DI  ED+++DT RASG+GGQH+NTTDSA+RI
Sbjct: 203 ISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRI 262

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARL 277
           TH+PT  +V   SE+SQ +NR +AMK+L+A+L
Sbjct: 263 THLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 294


>gi|329913866|ref|ZP_08275999.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545272|gb|EGF30526.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 164

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 7/164 (4%)

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +++   HTS +++ V PE  +  ++DI   D+R+DT RASG+GGQH+N TDSAVR
Sbjct: 2   RKSPFDSANGRHTSFSSLFVYPEVDDSLEIDINPADVRVDTYRASGAGGQHINKTDSAVR 61

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           +TH PTGI+V   +++SQH+NR  A  +L++RLY+ E ++  +++    + K  IG G  
Sbjct: 62  LTHGPTGIVVQCQNDRSQHRNRAEAWAMLKSRLYEHEMRKRMSDQQKLEDSKTDIGWG-- 119

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y   Q RI D R +      + VL G ID+ I   L  
Sbjct: 120 -HQIRSYVLDQSRIKDLRTSFETGNTKAVLDGDIDEFIAASLKQ 162


>gi|229032803|ref|ZP_04188759.1| Peptide chain release factor 2 [Bacillus cereus AH1271]
 gi|228728476|gb|EEL79496.1| Peptide chain release factor 2 [Bacillus cereus AH1271]
          Length = 272

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 92/277 (33%), Positives = 141/277 (50%), Gaps = 10/277 (3%)

Query: 23  MSESPSVDAYIKLTEEYAA---ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M  +   D              +  ++ K    D+  +  +  H ++ +   +    +L 
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                 I++            LL  D  D  + ILE+  G GG+E+  +   L RMY R+
Sbjct: 61  SEVKGLIQEMNE-----YELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +KVE +     D+ G K +   I G   +  +K E GVHR+ R+   ++SGR HT
Sbjct: 116 AEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHT 175

Query: 200 SAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257
           S  +  V+PE  +  +++I  ED++IDT RASG+GGQH+NTTDSAVRITH PT  +V   
Sbjct: 176 SFVSCEVVPEFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQ 235

Query: 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           SE+SQ +NR  AMK+L+A+LY  + +    E   N +
Sbjct: 236 SERSQIKNREHAMKMLKAKLYQKKLEEQQAELDENSR 272


>gi|219129897|ref|XP_002185114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403293|gb|EEC43246.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 283

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 126/277 (45%), Positives = 173/277 (62%), Gaps = 26/277 (9%)

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC-ILEIRAGTGGSEAALFVG 130
           D +++   + E+  +++E   LE  I   +LP+D DD +S  I+EIRAGTGG EA+LF  
Sbjct: 9   DKDMQRECENELQRVDRERAVLEGLIVDAVLPEDEDDYESDAIIEIRAGTGGDEASLFAS 68

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR--------------- 175
           +L   Y++ A   +WKVEVL+ S  D GG +E   +ISG   F                 
Sbjct: 69  ELLEAYQKAAMAIRWKVEVLAESRTDIGGIREASISISGNASFRLPATDSEREDSGPLLG 128

Query: 176 ----MKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI---PLEDIRIDTMR 228
                KFESGVHRVQRVP  ++  R+HTSA ++AVLP  + I  +    P+ ++RI+TMR
Sbjct: 129 PYGAFKFESGVHRVQRVPINDS--RIHTSACSIAVLPFVSSISNEKELLPMSELRIETMR 186

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           +SG+GGQHVNTTDSAVRITH+PTGI      E+SQH+N+ +A+K++ AR+ D +R     
Sbjct: 187 SSGAGGQHVNTTDSAVRITHLPTGITAAIQDERSQHKNKAKALKLITARVRDRQRTDAQL 246

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
            R   R   +G GDRSERIRTYN+ Q RITDHR  ++
Sbjct: 247 ARGELRSNLMGGGDRSERIRTYNYPQDRITDHRCKVS 283


>gi|121704606|ref|XP_001270566.1| mitochondrial peptide chain release factor [Aspergillus clavatus
           NRRL 1]
 gi|119398712|gb|EAW09140.1| mitochondrial peptide chain release factor [Aspergillus clavatus
           NRRL 1]
          Length = 251

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 91/246 (36%), Positives = 133/246 (54%), Gaps = 24/246 (9%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGG---YKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           MY  + + R +   V+     D        E V  I   G +  ++ ESGVHRVQRVPAT
Sbjct: 1   MYTAFCSRRGFPSHVIKLDVQDGPSEDRLSEAVIEIDAGGAYDLLRTESGVHRVQRVPAT 60

Query: 192 EASGRVHTSAATVAVLPEAA---------------EIDVDIPLEDIRIDTMRASGSGGQH 236
           E  GR HTSA +V VLP                    D  I  +++R + MRASG+GGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPDTATGAEGALNFDDPNSDYYIDPQEVRTEKMRASGAGGQH 120

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+R+THIPTG +V+    +SQH NR +A +VLRA+L +  ++    E    R+ 
Sbjct: 121 VNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLRAKLAEARQESREQELVELRRG 180

Query: 296 ---QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAK 350
               +    R ++IRTYN+ Q R TDHR  +T++ L+ +L G   +D +++ + T    +
Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCTDHRSGITVHNLDDILGGGQGLDTVMDSVRTWLADQ 240

Query: 351 MIGSAS 356
            I + S
Sbjct: 241 EIAAMS 246


>gi|237840539|ref|XP_002369567.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|211967231|gb|EEB02427.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|221503426|gb|EEE29124.1| peptide chain release factor, putative [Toxoplasma gondii VEG]
          Length = 497

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 97/288 (33%), Positives = 138/288 (47%), Gaps = 45/288 (15%)

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAA-LRKWKVEVL--------------------- 150
           I+EIR   GG EA L+  DL  MY R+    + W+   L                     
Sbjct: 185 IVEIRPAAGGEEAQLWATDLAEMYTRFFTLQKGWRFSQLQLGGPNAGSRPPTQQRREDAV 244

Query: 151 --------------------SSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
                               S+     GG   I   + G GV+ ++  ESGVHRVQRVP 
Sbjct: 245 SGKRRAHANSSDSAAKDDGRSALSGALGGVTCIAFRVEGPGVYRQLLKESGVHRVQRVPR 304

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TEA GR+HTS ATVA++ E     V+I   D+ I T R+SG GGQ+VN  ++AV + H+P
Sbjct: 305 TEAQGRIHTSTATVAIVAEHNFRGVEINDADLVIRTARSSGCGGQNVNKVETAVDLLHVP 364

Query: 251 TGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI +    E++Q  N+  A  VL  +L     + +  +    R+ Q+ SG RSER+RTY
Sbjct: 365 TGIRVFCQQERTQAANKKAAKAVLLKKLAARHEEEVVQQMREERRDQVSSGLRSERVRTY 424

Query: 310 NFSQGRITDHR-INLT-LYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           NF  GR+ +HR      L+ L+ VL+G +  +   L      + +   
Sbjct: 425 NFRDGRVNEHRLTGGEGLFSLKSVLEGQLHALHARLDRQEAEQRVQQM 472


>gi|149919721|ref|ZP_01908199.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1]
 gi|149819492|gb|EDM78922.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1]
          Length = 311

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 90/294 (30%), Positives = 152/294 (51%), Gaps = 11/294 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           +I ++  R  E+   + +   +       +L+ E+A ++P+    +   + +++  +   
Sbjct: 8   KIENIAERHEELGEMICDQEVMADKRRFLELSREHAELTPVAMAFAKLVELERQLGETRE 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D ++R+LAQ +V  +  ++ + E E+  LL PKD +D K+ ILEIRAGTGG E
Sbjct: 68  LL----DDPDMRELAQADVRELGGQVEDAETELTRLLTPKDPNDAKNVILEIRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A LFV DL+RMY R++   +W ++ +  S+N  GG+KEI   + G+G ++++KFE GVHR
Sbjct: 124 AGLFVADLWRMYNRFSERHRWAIDQVEFSENSAGGFKEITGRVQGKGAWAQLKFERGVHR 183

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAV 244
           VQRVPATE+ GR+HTS ATVA++PE                    +   G   +T     
Sbjct: 184 VQRVPATESQGRIHTSTATVAIMPEPRTSTSTSIPRTSSSRPCARAARAG-STSTPRLRG 242

Query: 245 RITHIPTGIMVTSSEKSQHQN---RLRAMKVLRARLYDVERKRMANERSANRKL 295
                  G  V   ++S  QN             ++   +R+R  ++R   +K 
Sbjct: 243 PPAPQAHGHRVRCDQRSPAQNASSHEALRSRCSDQIQSKQRRRPWSDRREAQKS 296


>gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major]
 gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain
           Friedlin]
          Length = 439

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 8/309 (2%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
             +D   K+      +    +       K    ++   ++     D          +   
Sbjct: 100 DELDIAAKVCAVLRQLDENATLHDQLQSKSLRNREDEEILDMVKEDIATLMNQLRLLEGE 159

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA-ALRKW 145
              +     E                 + +    GG EA+LF  +L  MY  YA   R W
Sbjct: 160 VNAV----MERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNW 215

Query: 146 KVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVA 205
           KV  +   D  +         + G GV+  M+ E GVH+VQRVP T+A+G++ TS A   
Sbjct: 216 KVRPVVKDDGSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFT 274

Query: 206 VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQ 264
           ++P    + VD+   D +ID +R SG GGQ + ++ + V +TH P+GI V     +S   
Sbjct: 275 MMPVLDPVSVDVHENDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALG 334

Query: 265 NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
           N+  A++++  ++     K   +      + Q  SG+RS+++RTYN  Q R+TDHR+   
Sbjct: 335 NKELALQMVAQQILAQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNHPQNRVTDHRLG-K 393

Query: 325 LYKLEYVLQ 333
            Y L   ++
Sbjct: 394 DYALSSFME 402


>gi|213419806|ref|ZP_03352872.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 133

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 70/131 (53%), Positives = 100/131 (76%), Gaps = 1/131 (0%)

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+SG+GGQHVNTTDSA+RITH+PTGI+V    E+SQH+N+ +A+ VL AR++  E  +  
Sbjct: 1   RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQ 60

Query: 287 NERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
              ++ R+  +GSGDRS+R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  
Sbjct: 61  QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQE 120

Query: 347 HQAKMIGSASE 357
           HQA ++ + SE
Sbjct: 121 HQADLLAALSE 131


>gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 302

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 4/224 (1%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYA-ALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
             + +    GG EA+LF  +L  MY  YA    KW+V  ++  D  +         + G 
Sbjct: 44  WNINVEGKAGGEEASLFAAELAEMYRTYAMEFCKWEVCPVAMDDGSEA-CSSNEFQVRGE 102

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
           GV+  M  E GVH+VQRVP T+A+G++ TS A   ++P    + VD+   D +ID +R S
Sbjct: 103 GVYRNMHHEIGVHKVQRVPVTDATGKMQTSTAVFTLMPVLDPVSVDVHESDCKIDFVRGS 162

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQ + ++ + V +TH P+GI V     +S   N+  A++++  ++     K   +  
Sbjct: 163 GPGGQGMQSSSNCVVLTHKPSGISVKCHQCRSALGNKELALQMVAQQILARRVKEQNSSL 222

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
               + Q  SG+RS+R+RTYN+ Q R+TDHRI    Y L   ++
Sbjct: 223 HKAWQNQWSSGERSDRMRTYNYPQNRVTDHRIG-KDYALSSFME 265


>gi|1149684|emb|CAA60204.1| prfA [Clostridium perfringens]
          Length = 136

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 80/135 (59%), Positives = 106/135 (78%), Gaps = 1/135 (0%)

Query: 201 AATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
            ATVAVLPE  +++++I  +DI+ID  RASG+GGQ VNTTDSAVRITH+P+G++V    E
Sbjct: 1   TATVAVLPEVDDVEIEINDKDIKIDVFRASGNGGQCVNTTDSAVRITHLPSGLVVSCQDE 60

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           KSQ +N+ +AMKVLRARL++          + +RK Q+G+GDRSERIRTYN+ QGR+TDH
Sbjct: 61  KSQLKNKEKAMKVLRARLFEQAEAERLAGIAEDRKSQVGTGDRSERIRTYNYPQGRVTDH 120

Query: 320 RINLTLYKLEYVLQG 334
           RIN+TLYKL+  L+G
Sbjct: 121 RINMTLYKLDSFLEG 135


>gi|95007275|emb|CAJ20495.1| peptide chain release factor 1, putative [Toxoplasma gondii RH]
 gi|221482780|gb|EEE21111.1| peptide chain release factor, putative [Toxoplasma gondii GT1]
          Length = 497

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 96/288 (33%), Positives = 137/288 (47%), Gaps = 45/288 (15%)

Query: 113 ILEIRAGTGGSEAALFVGDLFRMYERYAA-LRKWKVEVL--------------------- 150
           I+EIR   GG EA L+  DL  MY R+    + W+   L                     
Sbjct: 185 IVEIRPAAGGEEAQLWATDLAEMYTRFFTLQKGWRFSQLQLGGPNAGSRPPTQQRREDAV 244

Query: 151 --------------------SSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
                               S+     GG   I   + G GV+ ++  ESGVHRVQRVP 
Sbjct: 245 SGKRRAHANSSDSAAKDDGRSALSGALGGVTCIAFRVEGPGVYRQLLKESGVHRVQRVPR 304

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           TEA GR+HTS ATVA++ E     V I   D+ I T R+SG GGQ+VN  ++AV + H+P
Sbjct: 305 TEAQGRIHTSTATVAIVAEHNFQGVAINDADLVIRTARSSGCGGQNVNKVETAVDLLHVP 364

Query: 251 TGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
           TGI +    E++Q  N+  A  VL  +L     + +  +    R+ Q+ SG RSER+RTY
Sbjct: 365 TGIRVFCQQERTQAANKKAAKAVLLKKLAARHEEEVVQQMREERRDQVSSGLRSERVRTY 424

Query: 310 NFSQGRITDHR-INLT-LYKLEYVLQGYIDDIINPLLTAHQAKMIGSA 355
           NF  GR+ +HR      L+ L+ +L+G +  +   L      + +   
Sbjct: 425 NFRDGRVNEHRLTGGEGLFSLKSILEGQLHALHARLDRQEAEQRVQQM 472


>gi|71000757|ref|XP_755060.1| mitochondrial translation release factor (RF-1) [Aspergillus
           fumigatus Af293]
 gi|66852697|gb|EAL93022.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus fumigatus Af293]
 gi|159128074|gb|EDP53189.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus fumigatus A1163]
          Length = 256

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 92/246 (37%), Positives = 134/246 (54%), Gaps = 24/246 (9%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGG---YKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           MY  + + R  +  V+     D        E V  I   G +  ++ ESGVHRVQRVPAT
Sbjct: 1   MYTAFCSRRGLQSNVIKLDVQDGPSDDRLSEAVVEIDADGAYDLLRTESGVHRVQRVPAT 60

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIP---------------LEDIRIDTMRASGSGGQH 236
           E  GR HTSA +V VLP   E    +                 +++R + MRASG+GGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPEAGPSMDSALNFDDPNSDYYVDPQEVRTEKMRASGAGGQH 120

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+R+THIPTGI+V+    +SQH NR +A +VLRA+L +  ++    E    R+ 
Sbjct: 121 VNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQVLRAKLAEARQEAREQELVELRRG 180

Query: 296 ---QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAK 350
               +    R ++IRTYN+ Q R TDHR  +T++ L+ VL G   ++ I++ + T    +
Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCTDHRSGITVHNLDNVLDGGESLETIMDSVRTWLADQ 240

Query: 351 MIGSAS 356
            I + S
Sbjct: 241 EIAAIS 246


>gi|145362209|ref|NP_973706.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|110735990|dbj|BAE99969.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|330255694|gb|AEC10788.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 256

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 110/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%)

Query: 30  DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKE 89
           + + +  +E   +   +  I+    K++E   L +++ + + D ++ DLA  E+    +E
Sbjct: 17  EEFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEE 76

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
            + L+  +   LLPKD  D++ CILE+RAGTGG EA+LF  D+FRMYERY+  + WK ++
Sbjct: 77  EKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDI 136

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           +  +++D  GYKE  A I G  V+ ++KFESG+HRVQR+P TE SGR+HTSA +VA+LP+
Sbjct: 137 VDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQ 196

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQN 265
           A E+DV +  ED+RIDT R+ GSGGQH NTT+SAVRI H+PTG+MV+   E+SQH +
Sbjct: 197 ADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMS 253


>gi|147836146|emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 133/332 (40%), Gaps = 5/332 (1%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E  + +    D   K  E    ++     +        + ++   +      D+    L 
Sbjct: 117 EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLVEMDAINHGLF 176

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +    A     + L  +     L +   D +   L I+AG  G  + ++   L  MY ++
Sbjct: 177 EQAYNASVDVSKFL-YQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKW 235

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +K  V+    + +GG K           +  +  E GVH + R    E+     T
Sbjct: 236 AEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSDDESILHEQT 295

Query: 200 SAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            +A V V+P   E   D+ ++D  +     S  G +    T  AV I HIPTGI V +S 
Sbjct: 296 GSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGVE-QGRTGHAVCIQHIPTGISVQSSG 354

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-IT 317
           E+S   N++RA+  L+A+L     ++   E    ++  I      +  R Y F   + + 
Sbjct: 355 ERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADM-WKQETRRYVFHPNKLVQ 413

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           D + ++ L  L  VL G I+ +I   ++  QA
Sbjct: 414 DVKTDIQLPDLNSVLDGNIEPLIGANISMRQA 445


>gi|330951102|gb|EGH51362.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7]
          Length = 111

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+P+GI+V    E+SQH+NR RAM  L A+L D +    AN  ++ RKL +GSGDRSERI
Sbjct: 1   HLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGSGDRSERI 60

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           RTYNF QGR+TDHR+NLTLY L+ VL G +D +I PLL  +QA  + +  E
Sbjct: 61  RTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 111


>gi|119493428|ref|XP_001263904.1| mitochondrial peptide chain release factor [Neosartorya fischeri
           NRRL 181]
 gi|119412064|gb|EAW22007.1| mitochondrial peptide chain release factor [Neosartorya fischeri
           NRRL 181]
          Length = 256

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 92/246 (37%), Positives = 134/246 (54%), Gaps = 24/246 (9%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGG---YKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           MY  +   R  +  V+     D        E V  I   G +  ++ ESGVHRVQRVPAT
Sbjct: 1   MYTAFCTRRGLRSNVIKLDVQDGPSDDRLSEAVVEIDADGAYDLLRTESGVHRVQRVPAT 60

Query: 192 EASGRVHTSAATVAVLPEAA---------------EIDVDIPLEDIRIDTMRASGSGGQH 236
           E  GR HTSA +V VLP                  + D  +  +++R + MRASG+GGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPEAGASMDSALNFDDPDSDYYVDPQEVRTEKMRASGAGGQH 120

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+R+THIPTGI+V+    +SQH NR +A +VLRA+L +  ++    E    R+ 
Sbjct: 121 VNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQVLRAKLAEARQEAREQELVELRRG 180

Query: 296 ---QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAK 350
               +    R ++IRTYN+ Q R TDHR  +T++ L+ VL G   ++ I++ + T    +
Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCTDHRSGITVHNLDNVLDGGESLETIMDSVRTWLADQ 240

Query: 351 MIGSAS 356
            I + S
Sbjct: 241 EIAAIS 246


>gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
 gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 456

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 80/347 (23%), Positives = 149/347 (42%), Gaps = 26/347 (7%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
             +D   +++     ++  +        +K    +   ++     D E        +   
Sbjct: 99  EEIDVAEEISGYLVKLNENVKLRDQILLEKDSVGEDRDLLSILEEDMESLLNQVRNMDDC 158

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA-LRKW 145
              +                   ++ +LE+    GG EA+LF  +L  MY  Y+  +R W
Sbjct: 159 VNGV----MARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFAAELAEMYREYSTGVRNW 214

Query: 146 KVEVLS-----------------SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           ++E                    +          +     G  V+  ++ E GVH+VQRV
Sbjct: 215 RIEEAENGAGGAAGGGGGGGDASALSAPALASTGVKFKAIGDNVYRNLRHEIGVHKVQRV 274

Query: 189 PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           P T+  G++ TS A V ++P    + V++   D +I+ +R SG GGQ + ++ +AV +TH
Sbjct: 275 PLTDQDGKMQTSTAVVTLMPVLDPVSVNVHENDCKIEFVRGSGPGGQGMQSSSNAVCLTH 334

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           IP+GI V     +S   N+  A++++  +L     K   +      + Q  SG+RS+++R
Sbjct: 335 IPSGISVKCHQSRSALGNKEIALQLVAQQLLAQRVKDQNSSLHEAWRNQWSSGERSDKMR 394

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMI 352
           TYN+ Q R+TDHR+    + L   ++G   +  + + L  A   K +
Sbjct: 395 TYNYPQNRVTDHRLG-KDFPLNTFMEGGNGLKGLHDDLNAAEDRKQL 440


>gi|76664975|emb|CAJ17928.1| protein chain release factor 2 [Candidatus Phytoplasma solani]
          Length = 175

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 66/166 (39%), Positives = 102/166 (61%), Gaps = 3/166 (1%)

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           HR+ RV   +++ + HTS  +  VLPE  +   +++  ED++ID  R+SG+GGQHVNTTD
Sbjct: 1   HRLVRVSPFDSNAKRHTSFVSCDVLPEIKDEIKINVKPEDLKIDVFRSSGAGGQHVNTTD 60

Query: 242 SAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           SAVRITH+PTG++V   +E+SQ +NR +A+++L+ +L+ +  K    E     +      
Sbjct: 61  SAVRITHLPTGLVVGCQNERSQIKNREKALQMLKTKLFQLALKEQKEETVKQFQSDQKEI 120

Query: 301 DRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               +IR+Y F     + DHR N   ++LE V+ G +DD IN  LT
Sbjct: 121 GWGSQIRSYVFHPYKMVKDHRTNQENFQLEQVMDGNLDDFINGYLT 166


>gi|322829249|gb|EFZ32717.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 476

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 81/350 (23%), Positives = 149/350 (42%), Gaps = 29/350 (8%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
             +D   +++     ++  +        +K    +   ++     D E        +   
Sbjct: 116 EEIDVAEEISGYLVKLNENVKLRDQILLEKDPVGEDRDLLSMLEEDMESLLNQVRNMDDC 175

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA-LRKW 145
              +                   ++ +LE+    GG EA+LF  +L  MY  Y+  +R W
Sbjct: 176 VNGV----MARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFASELAEMYREYSTGVRNW 231

Query: 146 KVEVLS--------------------SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           ++E                       +          +     G  V+  ++ E GVH+V
Sbjct: 232 RIEEAENGAGGGGGGAAGGGGGGDASALSAPALASTGVKFKAIGDSVYRNLRHEIGVHKV 291

Query: 186 QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           QRVP T+  G++ TS A V ++P    + V++   D +I+ +R SG GGQ + ++ +AV 
Sbjct: 292 QRVPLTDQDGKMQTSTAVVTLMPVLDPVSVNVHENDCKIEFVRGSGPGGQGMQSSSNAVC 351

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIP+GI V     +S   N+  A++++  +L     K   +      + Q  SG+RS+
Sbjct: 352 LTHIPSGISVKCHQSRSALGNKETALQLVAQQLLAQRVKDQNSSFHEAWRNQWSSGERSD 411

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQAKMI 352
           ++RTYNF Q R+TDHR+    + L   ++G   +  + + L  A   K +
Sbjct: 412 KMRTYNFPQNRVTDHRLG-KDFPLNTFMEGGNGLKGLHDDLNAAEDRKQL 460


>gi|30692917|ref|NP_198466.2| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|332006669|gb|AED94052.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 391

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 124/254 (48%), Gaps = 2/254 (0%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+     +E + +++   D   K  E  ++++ +  ++ +  + K   +D  T++  
Sbjct: 104 LQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKL 163

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
                        E + I KE+ +  ++     L     D +  ++ I AG GG++A  +
Sbjct: 164 TEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDW 223

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY R+   +++K +V+  S+ ++ G K     I GR  +  +  E G HR+ R 
Sbjct: 224 ADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQ 283

Query: 189 PATEASGRVHTSAATVAVLP--EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
               + G   TS + V V+P      + ++IP ED+ I   RA G GGQ+VN  ++AVRI
Sbjct: 284 SPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRI 343

Query: 247 THIPTGIMVTSSEK 260
           THIPTG+ V  +++
Sbjct: 344 THIPTGVAVRCTDR 357


>gi|302820744|ref|XP_002992038.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
 gi|300140160|gb|EFJ06887.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
          Length = 654

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 6/200 (3%)

Query: 152 SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA 211
           SS  ++ G K     I GR  +  +  E G HR+ R     + G   TS A V V+    
Sbjct: 116 SSPGEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQLPFNSKGLRQTSFAGVEVMHVRT 175

Query: 212 EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAM 270
           +++   P +       R+ G GGQ+VN  ++AVR+THIPTGI +  S ++SQ QN+++A+
Sbjct: 176 KLNSTQPGQA---TLCRSGGKGGQNVNMVETAVRVTHIPTGIALRCSEKRSQLQNKIKAI 232

Query: 271 KVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLE 329
            +L+++L  +   + A E    R   +   +  ++IR Y F   + + D R N+    + 
Sbjct: 233 VLLKSKLLVILEDQRAAEIKEIR-GDVVKAEWGQQIRNYVFHPYKLVMDLRTNVETSDIS 291

Query: 330 YVLQGYIDDIINPLLTAHQA 349
            ++ G ++ ++   L + Q+
Sbjct: 292 GIMDGKLEPLLTAYLMSKQS 311


>gi|146332693|gb|ABQ22852.1| mitochondrial peptide chain release factor 1 precursor-like protein
           [Callithrix jacchus]
          Length = 192

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 84/185 (45%), Positives = 121/185 (65%), Gaps = 6/185 (3%)

Query: 179 ESGVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQ 235
           E G+HRVQR+P    S R+   HT   +V +LP+  E+DV +  +D+RIDT RA G+GGQ
Sbjct: 1   EGGIHRVQRIPEVGLSSRMQRIHTGTMSVIILPQPDEVDVKLDPKDLRIDTFRARGAGGQ 60

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVNTTDSAVR+ HIPTG++V    E+SQ +N+  A+ VLRARLY    ++   ++ + RK
Sbjct: 61  HVNTTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLYQQIIEKNKCQQHSTRK 120

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTAHQAKMI 352
           LQ+G+G +SERI TYNF+Q R+TDHRI   +  ++  + G   +D +I  LL +   + I
Sbjct: 121 LQVGTGAQSERILTYNFTQDRVTDHRIAYEVRDIKEFVCGGKALDQLIQRLLQSADEEAI 180

Query: 353 GSASE 357
               +
Sbjct: 181 VELLD 185


>gi|71028468|ref|XP_763877.1| peptide chain release factor 2 [Theileria parva strain Muguga]
 gi|68350831|gb|EAN31594.1| peptide chain release factor 2, putative [Theileria parva]
          Length = 376

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 24/266 (9%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALR----------KWKVEVLS 151
            P    D   C L I++G GGSE+  +   L  MY+++ +              +++ + 
Sbjct: 77  DPTRKYDRNYCKLIIKSGVGGSESFDWCRILAEMYKKFISSYDPPPGPNLPTSLRLKEVD 136

Query: 152 SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA 211
                 GG++ +   + G   +  +K E+G HR+ R     +  +  T+ ATV  +P  +
Sbjct: 137 VCPGTSGGFRRVEYDVIGDYAYRLLKGENGTHRLIRNSPFNSDHKRQTTFATVQAVPILS 196

Query: 212 EIDVDIPL---------EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKS 261
           + D +I           +D+ I++MR+SG GGQ+VN  ++AVR+ H PTG+ V    E++
Sbjct: 197 DTDEEIINFKKNRQILKKDLIIESMRSSGKGGQNVNKVETAVRVYHKPTGLSVKVQQERT 256

Query: 262 QHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ-IGSGDRSERIRTYNF-SQGRITDH 319
             QNR  A+++L   + +   K++  +    +    +G+      IRTY    + R+ DH
Sbjct: 257 NTQNREIAIRMLTKLVDEHYLKKLNEKLDDIKGADLVGT--WGSHIRTYTLNPEQRVKDH 314

Query: 320 RINLTLYKLEYVLQGYIDDIINPLLT 345
           R N    K   VL G +  II  LL 
Sbjct: 315 RTNFETAKATNVLNGDLLPIILNLLQ 340


>gi|294623963|ref|ZP_06702760.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601738|gb|EFF45678.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 178

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 6/142 (4%)

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
                I++DI   D+R D  R+SG+GGQHVN T+SAVRITHIPT  +V   + +SQHQNR
Sbjct: 6   EVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNR 65

Query: 267 LRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
             AMK+L A+LY++E ++   ER A    K  IG G    +IR Y   Q RI D R  + 
Sbjct: 66  DNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWG---SQIRNYVLDQSRIKDLRTGIE 122

Query: 325 LYKLEYVLQGYIDDIINPLLTA 346
               + VL G +D+ +   L A
Sbjct: 123 RSDTQKVLDGDLDEFVEASLKA 144


>gi|325190234|emb|CCA24711.1| peptide chain release factor putative [Albugo laibachii Nc14]
          Length = 372

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 96/296 (32%), Positives = 159/296 (53%), Gaps = 13/296 (4%)

Query: 19  IELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEI 75
           +    S           I +++  +A+   + ++S Y  +  E ++L+ ++ +   D E+
Sbjct: 79  LREESSTLGFWGNAANAIAISQRLSAMESQLQRVSAYRAQFLETKELY-LLSEAEKDQEM 137

Query: 76  RDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRM 135
            +     + +I K ++ L       L+    DD   C LEI+AG GG+++  +V  L +M
Sbjct: 138 MEECFETMESIRKAVQTLS----MELMLSGKDDRLPCFLEIQAGAGGTDSQDWVAMLSKM 193

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           YER+A  +K+KV+ +     + GG++ +   I G   +  +K E+GVHR+ R+   +   
Sbjct: 194 YERWAQHKKYKVQYVDGLRTELGGFRSVCLRIDGDLAYGWIKLEAGVHRLIRLSPYDQQK 253

Query: 196 RVHTSAATVAVLPEAAEIDVD---IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           R HTS A V V P  A        +  +D+RIDT RA+G GGQHVN+TDSAVRITH+P+G
Sbjct: 254 RRHTSFAQVRVYPIEAAEATTRTAVSGKDLRIDTFRATGPGGQHVNSTDSAVRITHLPSG 313

Query: 253 IMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
           I+V   SE+SQH+N+ +AM+VL A+L + E     + +    K   G      ++R
Sbjct: 314 IVVQCQSERSQHRNKAQAMEVLLAKLNNQEIAEQQSAKRQYAKGL-GDNAWGNQVR 368


>gi|297739884|emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 133/332 (40%), Gaps = 6/332 (1%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E  + +    D   K  E    ++     +        + ++   +      D+    L 
Sbjct: 82  EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLVEMDAINHGLF 141

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +    A     + L  +     L +   D +   L I+AG  G  + ++   L  MY ++
Sbjct: 142 EQAYNASVDVSKFL-YQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKW 200

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +K  V+    + +GG K           +  +  E GVH + R    E+     T
Sbjct: 201 AEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSDDESILH-ET 259

Query: 200 SAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            +A V V+P   E   D+ ++D  +     S  G +    T  AV I HIPTGI V +S 
Sbjct: 260 GSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGVE-QGRTGHAVCIQHIPTGISVQSSG 318

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-IT 317
           E+S   N++RA+  L+A+L     ++   E    ++  I      +  R Y F   + + 
Sbjct: 319 ERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADM-WKQETRRYVFHPNKLVQ 377

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           D + ++ L  L  VL G I+ +I   ++  QA
Sbjct: 378 DVKTDIQLPDLNSVLDGNIEPLIGANISMRQA 409


>gi|169607138|ref|XP_001796989.1| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
 gi|160707160|gb|EAT86455.2| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
          Length = 294

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 88/309 (28%), Positives = 150/309 (48%), Gaps = 32/309 (10%)

Query: 55  KKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
             +   +L ++I D  +D E+R LA  ++     ++      +   L+P        CIL
Sbjct: 2   LTESVTELTSLIHDPTTDPELRSLAADDLGESRTQLANASQSLITSLVPVHPFAHLPCIL 61

Query: 115 EIRAGTGGSEAALFVGDLFRMYERYAALRKWKV---EVLSSSDNDDGGYKEIVATISGRG 171
           EIR G GGSEAA+F GDLFRMY+ +     ++    +  + +   + G     A      
Sbjct: 62  EIRPGAGGSEAAIFAGDLFRMYQTFCNRSGFRTSLLKYENVNGTTEAGVPLSEAIFEIEN 121

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
             +   F S           E                   E D  I  ++I+++ MRASG
Sbjct: 122 ADAYGVFRS-------QEDFEN-----------------PESDYYIDQKEIKLEVMRASG 157

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +GGQHVN T+SAVR+THIPT  +V+    +SQH+N+  A  ++R+R+  + R++   E  
Sbjct: 158 AGGQHVNKTESAVRLTHIPTNTVVSMQDSRSQHKNKESAWSLMRSRIAQLRREKREEEMV 217

Query: 291 ANRKLQIG--SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY--IDDIINPLLTA 346
             R+  +G     R +++RTYN+ Q R+TDHR  +T++ L+ V+ G   ++ ++  +   
Sbjct: 218 NLRRSVVGVAKMGRGDKVRTYNWGQQRVTDHRSGITVHDLDDVMGGGQTLEKVMESVRGW 277

Query: 347 HQAKMIGSA 355
              + + + 
Sbjct: 278 LMERDVEAL 286


>gi|323445681|gb|EGB02173.1| hypothetical protein AURANDRAFT_35500 [Aureococcus anophagefferens]
          Length = 268

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 13/260 (5%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
                     D   C LEI AG GG +A  +   + RMY R+   R + V     S+ D 
Sbjct: 1   ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60

Query: 158 GGYKE-IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD 216
            G  + +   I G   F   + E G HR+ R     ++ +  TS A+V   P+  +   D
Sbjct: 61  PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120

Query: 217 IP-------LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLR 268
           +P         D+ + T RA G+GGQ+VN  ++AVR+TH+PTG+ V  + E++Q  N+  
Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRMTHVPTGLRVRCARERTQGANKAI 180

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYK 327
           A+ +LRA+L     ++ A   +  R  ++   D    +R+Y     + + D +       
Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADIRGDRVA-ADFGASVRSYVLHPYKLVKDDK--HETPH 237

Query: 328 LEYVLQGYIDDIINPLLTAH 347
              VL G +   ++  L   
Sbjct: 238 ATDVLDGDLGPFLDAELRRR 257


>gi|225441347|ref|XP_002274658.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 417

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 133/332 (40%), Gaps = 6/332 (1%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E  + +    D   K  E    ++     +        + ++   +      D+    L 
Sbjct: 85  EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLVEMDAINHGLF 144

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
           +    A     + L  +     L +   D +   L I+AG  G  + ++   L  MY ++
Sbjct: 145 EQAYNASVDVSKFL-YQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKW 203

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  + +K  V+    + +GG K           +  +  E GVH + R    E+     T
Sbjct: 204 AEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSDDESILH-ET 262

Query: 200 SAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSS 258
            +A V V+P   E   D+ ++D  +     S  G +    T  AV I HIPTGI V +S 
Sbjct: 263 GSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGVE-QGRTGHAVCIQHIPTGISVQSSG 321

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-IT 317
           E+S   N++RA+  L+A+L     ++   E    ++  I      +  R Y F   + + 
Sbjct: 322 ERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADM-WKQETRRYVFHPNKLVQ 380

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
           D + ++ L  L  VL G I+ +I   ++  QA
Sbjct: 381 DVKTDIQLPDLNSVLDGNIEPLIGANISMRQA 412


>gi|255017364|ref|ZP_05289490.1| peptide chain release factor 2 [Listeria monocytogenes FSL F2-515]
          Length = 231

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/236 (28%), Positives = 120/236 (50%), Gaps = 9/236 (3%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH---TVIGD 68
           ++ R AE+E +M +    +      +     +        +   ++E++ +     ++ +
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +    +L +     +              L+  D  D  + ILE+  G GG+E+  +
Sbjct: 61  EADEDLQEELEKDIKAYMATISE-----FELKLMLSDPYDKNNAILELHPGAGGTESQDW 115

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L RMY+R++  + +KVE+L     D+ G K +   I G   +  +K E GVHR+ R+
Sbjct: 116 GSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 175

Query: 189 PATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
              ++SGR HTS  +V V+PE   +I++++  ED++IDT RA+G+GGQH+NTTDSA
Sbjct: 176 SPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 231


>gi|238506130|ref|XP_002384267.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus flavus NRRL3357]
 gi|220690381|gb|EED46731.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus flavus NRRL3357]
          Length = 267

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 85/239 (35%), Positives = 131/239 (54%), Gaps = 24/239 (10%)

Query: 135 MYERYAALRKWKVEVLSSSDND---DGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           MY  + + R ++  V+     D   +    E V  +   G +  ++ ESGVHRVQRVPAT
Sbjct: 1   MYTAFCSRRGFRSNVIKLEVGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPAT 60

Query: 192 EASGRVHTSAATVAVLPEAA---------------EIDVDIPLEDIRIDTMRASGSGGQH 236
           E  GR HTSA +V VLP                    D  +  +++R + MRA G+GGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQH 120

Query: 237 VNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKL 295
           VN T+SA+R+TH+PTGI+V+    +SQH NR +A ++LRARL +  ++    +    R+ 
Sbjct: 121 VNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRG 180

Query: 296 ---QIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDIINPLLTAHQA 349
               +    R ++IRTYN+ Q R TDHR ++T++ L  VL G   ++ ++    T  ++
Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCTDHRSSITIHNLNDVLDGGEGLETVMESFTTVQES 239


>gi|161833777|ref|YP_001597973.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS]
 gi|152206267|gb|ABS30577.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS]
          Length = 214

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 116/214 (54%), Gaps = 8/214 (3%)

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L+RMY  +A    +K++ ++S   D  G + I   + G   F  +K E+GVHR+ R+  
Sbjct: 1   MLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFGYLKGENGVHRLVRISP 60

Query: 191 TEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            + S + HTS A+V + P    +I++ I   DI  +T R+ GSGGQ+VN  +S VR+ H 
Sbjct: 61  FDNS-KRHTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSGGQNVNKVESGVRLHHH 119

Query: 250 PTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PT I++  S  KSQ  N+++A+K+L++RL+ +E+K      +  +K      + S +IR 
Sbjct: 120 PTNIIIENSETKSQFNNKIKALKLLKSRLFYIEKKSKNTTCNKLKKK----IEWSSQIRN 175

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341
           Y     + + D R       +E VL G ID  + 
Sbjct: 176 YIMHPYKLVKDLRTGYETSDIESVLNGEIDIFLK 209


>gi|326478702|gb|EGE02712.1| peptide chain release factor 1 [Trichophyton equinum CBS 127.97]
          Length = 360

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 100/329 (30%), Positives = 168/329 (51%), Gaps = 30/329 (9%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L    A +  + +ES          +    I+P+ + +  +D   +   +L  +I + +
Sbjct: 26  ALAAEHATLTAKQAESFE----RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPS 81

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +D+E++ LA+ ++      +  L + +   L+P+    D  C++EIR G GG EA LF  
Sbjct: 82  TDTELKSLAEDDITTTIGTLSSLSDTLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAA 141

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGG------YKEIVATISGRGVFSRMKFESGVHR 184
            + RMY  + + R  +  ++     D  G        E+V  +   G ++ ++ E+GVHR
Sbjct: 142 KMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHR 201

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDI--------------PLEDIRIDTMRAS 230
           VQRVPATEA GR HTSA +V +LP   E + +                 +D++ +  RAS
Sbjct: 202 VQRVPATEAKGRTHTSAVSVMILPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRAS 261

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G+GGQHVN T+SAVR+THIPTG +++    +SQH+NR +A  +LRA+L    R+    E 
Sbjct: 262 GAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEM 321

Query: 290 SANRKLQIGSGD---RSERIRTYNFSQGR 315
              R+  +G  +   R ++I  + F   +
Sbjct: 322 MELRRGAMGGVNKTGRGDKI--HLFQHNQ 348


>gi|313636342|gb|EFS02127.1| peptide chain release factor 2 [Listeria seeligeri FSL S4-171]
          Length = 142

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/142 (43%), Positives = 92/142 (64%), Gaps = 7/142 (4%)

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLR 268
             +I++++  ED++IDT RA+G+GGQH+NTTDSAVR+THIP+GI+V   SE+SQ +NR +
Sbjct: 2   DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNRDQ 61

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTL 325
           AMK+L+ +LY  E++    E +  R  Q  IG G    +IR+Y F     + DHR N   
Sbjct: 62  AMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYSMVKDHRTNYET 118

Query: 326 YKLEYVLQGYIDDIINPLLTAH 347
             ++ V+ G +DD IN  L + 
Sbjct: 119 GNIQAVMDGDLDDFINAYLRSR 140


>gi|325278151|ref|ZP_08143660.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
 gi|324096726|gb|EGB95063.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
          Length = 157

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)

Query: 193 ASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           +  R HTS + V V PE  +  +++I   D+RIDT R+SG+GGQHVNTTDSAVRITH+PT
Sbjct: 1   SGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHVPT 60

Query: 252 GIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN--ERSANRKLQIGSGDRSERIRT 308
             +V   +E+SQH N+  AMK+LRA+LY++E ++     +   + K  IG G    +IR+
Sbjct: 61  NTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWG---HQIRS 117

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           Y     RI D R  +     + VL G +D  +   L  
Sbjct: 118 YVLDDSRIKDLRTGVERSDCQKVLDGDLDQYLEASLKQ 155


>gi|218297203|ref|ZP_03497865.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23]
 gi|218242480|gb|EED09019.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23]
          Length = 176

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 4/173 (2%)

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    +ASGR HTS A V V+PE  +  +V I  ED+RID  R+ G GGQ VNTTDSAVR
Sbjct: 2   RPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRSQGHGGQGVNTTDSAVR 61

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           I H+PTGI V   + +SQ +N+  A+KVLR+RL+++E K+   E    R  ++   +   
Sbjct: 62  IVHLPTGITVTCQTTRSQIKNKELALKVLRSRLFELEWKKKQEELQKLR-GEVRPIEWGS 120

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +IR+Y   +  + DHR  L  +  + VL G + D I   L   +A    +A E
Sbjct: 121 QIRSYVLDKQYVKDHRTGLMRFDPQNVLDGDLMDFIWAGLEW-KAGRRQAAEE 172


>gi|298369317|ref|ZP_06980635.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298283320|gb|EFI24807.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 106

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/105 (48%), Positives = 76/105 (72%)

Query: 253 IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFS 312
           ++     +SQH N+ +AMKVL ARL D +++    + +A RK  IGSGDRSE IRTYN+ 
Sbjct: 2   VVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSECIRTYNYP 61

Query: 313 QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           QGR+TDHRINLTL+KL++V+ G +++I N L+  HQA+++ +  +
Sbjct: 62  QGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAMGD 106


>gi|213162329|ref|ZP_03348039.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 194

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 82/193 (42%), Positives = 120/193 (62%), Gaps = 4/193 (2%)

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            C L+I+AG+GG+EA  +   L RMY R+A  R +K EV+  S+ +  G K     ISG 
Sbjct: 2   DCYLDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGE 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRA 229
             +  ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RA
Sbjct: 62  YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRA 121

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG+GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E
Sbjct: 122 SGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 181

Query: 289 RSANR--KLQIGS 299
           + A    K  IG 
Sbjct: 182 KQAMEDTKSDIGW 194


>gi|116334943|ref|YP_802438.1| putative peptide chain release factor A [Candidatus Carsonella
           ruddii PV]
 gi|116235224|dbj|BAF35072.1| putative peptide chain release factor A [Candidatus Carsonella
           ruddii PV]
          Length = 229

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 84/233 (36%), Positives = 142/233 (60%), Gaps = 7/233 (3%)

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISG 169
              I+EIR G GG E+  F  D+++MY ++   +    E++S+S+     +KEI+  +  
Sbjct: 3   NYLIIEIRQGIGGEESINFAKDIYKMYVKFFEKQNINFEIISNSN-----FKEIILKVEN 57

Query: 170 RGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
                ++  ESG+HRVQR+P +E  GRVHTS  TV V     + ++ +  ED++I+  ++
Sbjct: 58  NVFDKKLLNESGIHRVQRIPKSETQGRVHTSTCTVFVANINLDNNLKLKNEDLKIEICKS 117

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SGSGGQHVN T+SA++I H+PT I V  S E+SQ+ N+ +A+ +L  ++   ++     +
Sbjct: 118 SGSGGQHVNKTNSAIKIIHLPTKIAVECSDERSQNLNKTKALIILNMKILKFQKNNYNTQ 177

Query: 289 RSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIIN 341
            +  RK  I + +R+++IRTYNF+  +ITDH  N   ++L  +L G  + +I+
Sbjct: 178 LNNVRKKLISNSERAKKIRTYNFTNNKITDHINNKNYFQLNKILNGEFN-LID 229


>gi|169838094|ref|ZP_02871282.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division
           TM7 single-cell isolate TM7a]
          Length = 190

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 95/173 (54%), Positives = 129/173 (74%), Gaps = 2/173 (1%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           M+ RYA   +WK E++  ++   GG KE+   I G G +SR+KFESGVHRVQRVPATE+S
Sbjct: 1   MFTRYAERNRWKTEIIEKNEIGVGGLKEVTFLIKGHGAYSRLKFESGVHRVQRVPATESS 60

Query: 195 GRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           GRVHTS  TVAVLPE  +  +V+I   D++IDT R+SG+GGQHVNTTDSAVRITH+PTG+
Sbjct: 61  GRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGL 120

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           +V +   +SQ +N+  AMKVL ++LY++E ++  +     R+ Q+GSGDRSE+
Sbjct: 121 VVTSQDGRSQIKNKEAAMKVLVSKLYEMECEKQRSAVENERRSQVGSGDRSEK 173


>gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
 gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 270

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 106/193 (54%), Gaps = 4/193 (2%)

Query: 163 IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDI 222
           +     G  V+  ++ E GVH+VQRVP T+  G++ TS A V ++P    + V++   D 
Sbjct: 63  VKFKAIGDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMPVLDPVSVNVHENDC 122

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
           +I+ +R SG GGQ + ++ +AV +THIP+GI V     +S   N+  A++++  +L    
Sbjct: 123 KIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQLLAQR 182

Query: 282 RKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG--YIDDI 339
            K   +      + Q  SG+RS+++RTYNF Q R+TDHR+    + L   ++G   +  +
Sbjct: 183 VKDQNSSFHEAWRNQWSSGERSDKMRTYNFPQNRVTDHRLG-KDFPLNTFMEGGNGLKGL 241

Query: 340 INPLLTAHQAKMI 352
            + L  +   K +
Sbjct: 242 HDDLNASEDRKQL 254


>gi|224086914|ref|XP_002308002.1| predicted protein [Populus trichocarpa]
 gi|222853978|gb|EEE91525.1| predicted protein [Populus trichocarpa]
          Length = 374

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 67/350 (19%), Positives = 136/350 (38%), Gaps = 6/350 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            L+   +   + R  + E  + E    +   K  E    ++     I      K + ++ 
Sbjct: 29  MLAPTALEHEEARRIKQEEMIHECNLWEDPAKSNEILIKLAGSAKAIDALKDLKYKAEEA 88

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +      ++    L +    A     + L+      LL    D   +C++ IRAG+ G
Sbjct: 89  KLISQLVEMEAINYQLFKQAYTASLDVRKLLDQYEMSRLLKGPYDKQGACVV-IRAGSKG 147

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
               ++  +L  MY ++A    +K  ++    +  GG +           +  +  E G+
Sbjct: 148 LNHEIWKEELLNMYVKWAEKLGYKGRLVEKHTSMHGGIESATIEFEFECAYGYLSGERGI 207

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           H   ++ +   S     + A V V+P       D  ++D  +    +        + T+ 
Sbjct: 208 HH--KINSQNGSVHHEVTTACVDVVPLFLGTGFDFQIDDEELIVSCSPSLLRDRKSRTEL 265

Query: 243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
            V + HIPTGI V +S E+S   N+++A   L+A+L  +  ++   + S+ R+  I   +
Sbjct: 266 TVCLQHIPTGISVQSSGERSHFANKVKAHNRLKAKLLVIAEEQKVCDVSSIRRADIVD-E 324

Query: 302 RSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
             +  R Y     + + D R  + L  L  +L G I+ +I   +     +
Sbjct: 325 WQKETRRYVSQPYKLVQDVRTGIELPDLNSILDGNINTLIGAHINIRHTE 374


>gi|213622420|ref|ZP_03375203.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 240

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 132/238 (55%), Gaps = 7/238 (2%)

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +   L  +  + + +    +       A    + E   ++ +  +     D   C L+I+
Sbjct: 1   DVSGLLELAVEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 55

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AG+GG+EA  +   L RMY R+A  R +K EV+  S+ +  G K     ISG   +  ++
Sbjct: 56  AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 115

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGSGGQH 236
            E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+GGQH
Sbjct: 116 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQH 175

Query: 237 VNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           VN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E ++   E+ A  
Sbjct: 176 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAME 233


>gi|20799561|gb|AAM28548.1|AF494518_1 peptide releasing factor 1 [Tomato big bud phytoplasma]
          Length = 269

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 94/257 (36%), Positives = 145/257 (56%), Gaps = 5/257 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            ++  +K ++ + + ++ E+P     I L +E   +  I+     Y Q K+E + +   +
Sbjct: 3   DKLELIKKKYLQNQKKILENPKNFQNINLLKEMNKLQKIVFAYEEYIQLKKEYKTIQKTL 62

Query: 67  GDHNS---DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD--DDKSCILEIRAGTG 121
              N    + EI  LA+ E   +  +I+   N++  LL P   +  D +  I+EI+ G G
Sbjct: 63  SQXNDKILEEEIIQLAEXEKNNLIIKIKXKTNQLEKLLYPDQYNAEDKQDVIVEIKKGIG 122

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LFV DLFR Y++Y   +KWK+E+++       G   +   I+G+ VF  +K+ESG
Sbjct: 123 GQEANLFVSDLFRAYKKYIEYKKWKLEIINLLSTSKEGISSVEFVINGKNVFYYLKYESG 182

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           +HRVQR+P TE  GR+HTS   + V+P      ++I   DIR+DT  ASG GGQ VNTT 
Sbjct: 183 IHRVQRIPKTENKGRIHTSTVKILVIPNNNHQKIEINWNDIRVDTFNASGPGGQSVNTTK 242

Query: 242 SAVRITHIPTGIMVTSS 258
           SAVR+TH+PTGI  +  
Sbjct: 243 SAVRLTHLPTGISSSCQ 259


>gi|153845428|ref|ZP_01993769.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|149745113|gb|EDM56364.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
          Length = 148

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 61/141 (43%), Positives = 85/141 (60%), Gaps = 6/141 (4%)

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
                I +DI   D+RID  RASG+GGQHVNTT+SAVRITH+PT  +V   +++SQH+N+
Sbjct: 8   EIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNK 67

Query: 267 LRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLT 324
            +AMK LRA+L+++E ++   E+ AN   K  IG G    +IR+Y     RI D R  + 
Sbjct: 68  DQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG---SQIRSYVLDDSRIKDLRTGVE 124

Query: 325 LYKLEYVLQGYIDDIINPLLT 345
               + VL G +D  I   L 
Sbjct: 125 NRNTQAVLDGDLDKFIEASLK 145


>gi|156081736|ref|XP_001608361.1| peptide release factor [Plasmodium vivax SaI-1]
 gi|148800932|gb|EDL42337.1| peptide release factor, putative [Plasmodium vivax]
          Length = 446

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 9/276 (3%)

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D ++D ++R L +         ++++ +    ++  +   D     LEI  G GG EA 
Sbjct: 142 ADTHNDDDVRQLLRAVEDVGSLLLQDVVDFYKSVVNAEHHLDTDEVKLEITPGVGGLEAK 201

Query: 127 LFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           LF  DL  MYE +  L+ ++  ++   SD+   G++ IVA + G  V+     E+G+HRV
Sbjct: 202 LFCSDLLSMYEHFCKLKDFQCTLIRGESDDAKDGHRNIVAVVKGERVYEHFVQENGIHRV 261

Query: 186 QRVPATEASGRVHTSAATVAVLPEAA-----EIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           QRVP    S ++ TS + V V  E +     +  +++   D+ I+T R+ G GGQ VN  
Sbjct: 262 QRVPV--NSKKIQTSTSVVFVYDEESLRKKIKKKMNLKKSDLIIETKRSGGPGGQSVNKN 319

Query: 241 DSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++ V++ H PT I V      SQ QNR  A++ L+ +L+    ++  +     R+    S
Sbjct: 320 ETCVKVLHKPTNISVEVQKTSSQMQNRNMAIEALKTKLFSFYYQQEKDLFFKCRRSHKMS 379

Query: 300 GDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY 335
           GDRSE+IR+YNF    +TDH  N+    ++   +G 
Sbjct: 380 GDRSEKIRSYNFINDFVTDHLSNVQYPGIDLFFRGD 415


>gi|221054928|ref|XP_002258603.1| peptide release factor [Plasmodium knowlesi strain H]
 gi|193808672|emb|CAQ39375.1| peptide release factor, putative [Plasmodium knowlesi strain H]
          Length = 407

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 31/329 (9%)

Query: 36  TEEYAAISPIISKISIYDQKKQEEQDLHTVIGD----------------------HNSDS 73
              Y  I+ I  +  I      +      +  +                       ++D 
Sbjct: 50  GRTYQKITKIQERSKILKTLHDDLDVYTELFQESGFIDGGLNPDKTIQEVKSSSLMDTDD 109

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
           +I++L +         ++E+ +    ++  +   D +   +EI  G GG EA LF  DLF
Sbjct: 110 DIKELLRTIEDVGSLLLQEVVDFYKSVVNTEHHLDTEEVKVEITPGVGGLEAKLFCNDLF 169

Query: 134 RMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
            MYE++   + ++  ++   S++   GY+ IVA I G  V+     E+G+HRVQR+P   
Sbjct: 170 SMYEQFCKEKNFQCNLIKGESEDTKDGYRSIVAIIKGERVYEHFVQENGIHRVQRIPV-- 227

Query: 193 ASGRVHTSAATVAV-----LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
            S ++ TS + V V     L +  +  ++    D+ I+T R+ G+GGQ VN  ++ V+I 
Sbjct: 228 NSKKIQTSTSVVFVSDEESLKKKIQKKMNFGKNDLLIETKRSGGAGGQSVNKNETCVKIL 287

Query: 248 HIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H PT + V      SQ QNR  A++ L+ +L+    ++  +     +K    SGDRSE+I
Sbjct: 288 HKPTNLSVEVQKTSSQIQNRSMAIQALKNKLFSFYYQQEKDLYFKYKKSHKMSGDRSEKI 347

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGY 335
           RTYNF    ITDH  N+    ++   +G 
Sbjct: 348 RTYNFVGNFITDHLRNVQYPGIDLFFRGD 376


>gi|315254830|gb|EFU34798.1| PCRF domain protein [Escherichia coli MS 85-1]
          Length = 210

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 88/198 (44%), Positives = 135/198 (68%), Gaps = 7/198 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSAA 202
           VQRVPATE+ GR+HTSA 
Sbjct: 184 VQRVPATESQGRIHTSAC 201


>gi|84996385|ref|XP_952914.1| peptide chain release factor [Theileria annulata strain Ankara]
 gi|65303911|emb|CAI76290.1| peptide chain release factor, putative [Theileria annulata]
          Length = 364

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 45/286 (15%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALR-----------KWKVEVL 150
            P    D  SC L I++G GGSE+  +   L  MY+++ +               +++ +
Sbjct: 77  DPLRKYDRNSCKLIIKSGVGGSESFDWCRILTEMYKKFISHYEPPDSDDNFPSSLRLKEV 136

Query: 151 SSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA 210
                  GG++ +   + G   +  +K E+G HR+ R     +  +  TS  +V V+P  
Sbjct: 137 DVCPGSTGGFRRVEFDVIGDYAYRLLKGENGTHRLIRNSPFNSENKRQTSFGSVQVVPIL 196

Query: 211 AEIDVDIPL---------EDIRIDTMRASGSGGQHVNTTDSA------------------ 243
           ++ D ++           +D+ I++MR+SG GGQ+VN  ++A                  
Sbjct: 197 SDTDEEVVNFKKNRQLLKKDLIIESMRSSGKGGQNVNKVETAGNLLFLKSIFTKSTIDIF 256

Query: 244 --VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ-IGS 299
             VR+ H PTG+ V    E++  QNR  A+++L   +     K++  + +  +    +G+
Sbjct: 257 VLVRVYHKPTGLSVKVQQERTNTQNREIAIRMLTKLVDQHYLKKLNEKVNEIKGEDLVGT 316

Query: 300 GDRSERIRTYNF-SQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344
                 IRTY    + R+ DHR N    K   VL G +   I   L
Sbjct: 317 --WGSHIRTYTLNPEQRVKDHRTNFETSKATNVLNGDLLPFILTYL 360


>gi|213421201|ref|ZP_03354267.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 148

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/132 (43%), Positives = 81/132 (61%), Gaps = 6/132 (4%)

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRAR 276
              D+RID  RASG+GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+
Sbjct: 18  NPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAK 77

Query: 277 LYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
           LY++E ++   E+ A    K  IG G    +IR+Y     RI D R  +     + VL G
Sbjct: 78  LYELEMQKKNAEKQAMEDTKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDG 134

Query: 335 YIDDIINPLLTA 346
            +D  I   L A
Sbjct: 135 SLDQFIEASLKA 146


>gi|300176358|emb|CBK23669.2| unnamed protein product [Blastocystis hominis]
          Length = 244

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
            L  MY  +A    WK +++S  D+ D      +  + G  + S +  ESGVHR+ R+  
Sbjct: 1   MLLAMYTSFAQKMNWKCKLISKLDDGD-SCHSSILKLEGDDLASYLSLESGVHRLVRISP 59

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVD-IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            + + R HTS A+V+V P         I   +++ID  R+SG GGQHVN T+SAVR+TH+
Sbjct: 60  FDKNQRRHTSFASVSVSPVPEAASSLRILPTELQIDRFRSSGPGGQHVNKTESAVRVTHL 119

Query: 250 PTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR-KLQIGSGDRSERIR 307
           P+GI+    +E++QHQN   AM++++++L   E ++ A ++  +  +  +     S +IR
Sbjct: 120 PSGIVAECQAERNQHQNLEIAMEMVKSKLLLREAEKEAEKKQEDHARKDV--NAWSSQIR 177

Query: 308 TYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIIN 341
           +Y       + DHR  +    +E +L G +   + 
Sbjct: 178 SYVLHPYKMVKDHRFGVEEGDVEKILGGDLKGFVE 212


>gi|124507187|ref|XP_001352190.1| peptide release factor, putative [Plasmodium falciparum 3D7]
 gi|23505221|emb|CAD52001.1| peptide release factor, putative [Plasmodium falciparum 3D7]
          Length = 404

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 93/320 (29%), Positives = 145/320 (45%), Gaps = 9/320 (2%)

Query: 22  RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD-HNSDSEIRDLAQ 80
           ++SE  +    IKL +    +  +  ++ IY Q  +E  D      +    + +I  L  
Sbjct: 38  KISEHKAYSDIIKLQKHSHMLHTLNEELDIYKQLLKEIIDSKESYEERLKKNEDINQLNC 97

Query: 81  IEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYA 140
                    I ++       +      D     +EI AG GG EA +F  +LF MYE + 
Sbjct: 98  HIESVTNLIIDDIILFYKSYVNQDHHLDATEIKMEITAGVGGFEAKMFSKELFHMYENFC 157

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
            +R +  E+    +++    K IV  I G  ++     E+G+HRVQRVP    S +V TS
Sbjct: 158 RVRNYDYEMKEVINDEAKENKNIVLYIRGNNIYEDFYQENGIHRVQRVPI--NSNKVQTS 215

Query: 201 AATVAVLPEAAEIDVDIPLEDIR-----IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
            + V +  E  + D  +   +       I T R+ G+GGQ VN  ++ V+I H PT I V
Sbjct: 216 TSIVFICDEKKQKDNIMKKINFSKQDLLIQTKRSGGAGGQSVNKNETCVKILHKPTNIFV 275

Query: 256 T-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
                 SQ  N+  AM++L+ +LY+   +   N     +K Q  S DRS +IRTYNF   
Sbjct: 276 EVQKTSSQIHNKNLAMQLLKDKLYNFYYELEKNNFLKEKKNQKQSADRSHKIRTYNFLHD 335

Query: 315 RITDHRINLTLYKLEYVLQG 334
            I DH  N     ++   +G
Sbjct: 336 VIIDHITNTQYSGIQNFFKG 355


>gi|242087755|ref|XP_002439710.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor]
 gi|241944995|gb|EES18140.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor]
          Length = 409

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 76/337 (22%), Positives = 143/337 (42%), Gaps = 6/337 (1%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
            R  + E  + +    D   K  E  +A++  I  +      + + ++   +      D+
Sbjct: 76  QRIKQ-EEVLRKRNLWDNPAKSHETLSALADAIRVVDHLKDLRFKAEEAKLISQLSEMDA 134

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
              +L +    +       L+    Y LL    D + +CI+ + A + G  + L+   +F
Sbjct: 135 INGELFKQAYKSSVDASEYLDRYQMYKLLKGPYDKEGACII-VTAVSNGVTSELWAEKVF 193

Query: 134 RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
            MY  +A  + +KV ++    +  G  +     I    +F  +  E G+H++    + E 
Sbjct: 194 GMYTSWARKQGYKVGLIEKIFSTSGHIQSAAMEIESEYMFGTLSGEKGMHQMIY-SSLEN 252

Query: 194 SGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           S      +A V ++P   +  VD+ L+D  I+T  +     +      +AVR+ H+P+G+
Sbjct: 253 SDIDQALSARVDIIPLFLDRPVDLHLDDGDIETSPSPSVHKKRGRRNGAAVRVQHVPSGV 312

Query: 254 MVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF- 311
              SS E+S   N+L+A   L+A+L  V R+   ++     +  I     SE  R Y F 
Sbjct: 313 TAESSGERSYFANKLKATSRLKAKLLLVARELRVSDVKLINRQAIEDKCNSE-TRRYTFG 371

Query: 312 SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348
               + D    + L  L  VL+G I+  I   +T+ Q
Sbjct: 372 PHKLVHDLNTGIQLSDLNSVLEGDIEPFIRGRVTSRQ 408


>gi|329942484|ref|ZP_08291294.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10]
 gi|328815394|gb|EGF85382.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10]
          Length = 272

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 94/230 (40%), Positives = 130/230 (56%), Gaps = 2/230 (0%)

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           ++ D       + ++         + +E     L     D   C L I AG GG+E+  +
Sbjct: 9   NDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGAGGTESCDW 68

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
           V  LFRMY R+AA  +WKVEV+   + D  G K +    SG   +   K E GVHR+ R+
Sbjct: 69  VEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAERGVHRLVRI 128

Query: 189 PATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
              +++ + HTS A+V V P    EI++DI   D+RIDT R+SG+GGQHVN TDSAVRIT
Sbjct: 129 SPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNVTDSAVRIT 188

Query: 248 HIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           HIPTGIMV    E+SQ QNR   MK+LRAR+Y    +    ++  +RK +
Sbjct: 189 HIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKNK 238


>gi|325119759|emb|CBZ55312.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool]
          Length = 427

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 77/194 (39%), Positives = 112/194 (57%), Gaps = 5/194 (2%)

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE--IDVDIPLEDIRI 224
            S    F  +  E+G+HRVQRVP TEA GR+ TSA  V VLP ++     +D+    ++I
Sbjct: 214 FSRPDAFRFLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPRSSNLEDKIDLSPPTLKI 273

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
           D MRASG GGQ VN +++AVRITH PTG+ V     +SQ +N+  A+++LRA+L     +
Sbjct: 274 DFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQTENKNLALELLRAQLLQQMMR 333

Query: 284 RMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ--GYIDDIIN 341
           + + ER      Q GS DRSE+IRTYNF +  +TDHR  + +  +E  L     +  I++
Sbjct: 334 KASEERGRAIDAQKGSKDRSEKIRTYNFQRDVVTDHRCRMHVNGVEDFLDTSDGLGAILD 393

Query: 342 PLLTAHQAKMIGSA 355
            L    +   +   
Sbjct: 394 VLRRQREDAQLSVL 407


>gi|332825293|ref|XP_003311599.1| PREDICTED: mitochondrial translational release factor 1-like [Pan
           troglodytes]
          Length = 281

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 101/209 (48%), Positives = 143/209 (68%), Gaps = 2/209 (0%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PTG
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTG 269


>gi|332213667|ref|XP_003255946.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 271

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 99/209 (47%), Positives = 142/209 (67%), Gaps = 2/209 (0%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PT 
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTD 269


>gi|323964709|gb|EGB60180.1| peptide chain release [Escherichia coli M863]
          Length = 200

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 89/197 (45%), Positives = 135/197 (68%), Gaps = 7/197 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + E+ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           AALF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183

Query: 185 VQRVPATEASGRVHTSA 201
           VQRVPATE+ GR+HTSA
Sbjct: 184 VQRVPATESQGRIHTSA 200


>gi|119568099|gb|EAW47714.1| mitochondrial translational release factor 1-like, isoform CRA_c
           [Homo sapiens]
          Length = 271

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 100/209 (47%), Positives = 142/209 (67%), Gaps = 2/209 (0%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PT 
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTD 269


>gi|301344980|ref|ZP_07225721.1| peptide chain release factor 1 [Acinetobacter baumannii AB056]
 gi|301513510|ref|ZP_07238747.1| peptide chain release factor 1 [Acinetobacter baumannii AB058]
 gi|301597421|ref|ZP_07242429.1| peptide chain release factor 1 [Acinetobacter baumannii AB059]
          Length = 127

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/123 (49%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           H+N TDSAVRITHIPTG +V    E+SQH+N+ +AM +L +RL + +R       S  R+
Sbjct: 1   HINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRR 60

Query: 295 LQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
             +GSGDRSERIRTYN+ QGR+TDHRINLTLYKL+ +++G + ++++ L   +QA  +  
Sbjct: 61  DLVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAM 120

Query: 355 ASE 357
            ++
Sbjct: 121 LAQ 123


>gi|114609871|ref|XP_001140771.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 5 [Pan troglodytes]
          Length = 271

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 100/209 (47%), Positives = 142/209 (67%), Gaps = 2/209 (0%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PT 
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTD 269


>gi|296775661|gb|ADH42938.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 214

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 74/195 (37%), Positives = 120/195 (61%), Gaps = 1/195 (0%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +   ++  +  R+  +E  +S          K ++EY+ +  I+     Y   ++ ++D
Sbjct: 1   MIPIDKVKKVIERYISLEKELSTGKVEPKLLAKKSKEYSDLKNILPSAKEYVDFEKNKKD 60

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           L+ +I D  +D E+  LA+ E+    +   + E ++   LLPKD DD+K+ I+EIRAGTG
Sbjct: 61  LNNIIEDKKNDKEMISLAEKELKDAIENKEKNEKKLKIFLLPKDKDDEKNTIVEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESG 181
           G EA LFV DLFRMYE+  + + WK+E++S S ++  G+KE++ ++ G  ++S +K+ESG
Sbjct: 121 GLEATLFVADLFRMYEKVCSKKGWKIEIISISKSEAKGFKEVIFSVIGENIYSYLKYESG 180

Query: 182 VHRVQRVPATEASGR 196
           VHRVQRVP TEA GR
Sbjct: 181 VHRVQRVPTTEAQGR 195


>gi|166795305|ref|NP_001107656.1| peptide chain release factor 1-like, mitochondrial isoform b [Homo
           sapiens]
 gi|15680165|gb|AAH14428.1| MTRF1L protein [Homo sapiens]
 gi|56203459|emb|CAI18898.1| mitochondrial translational release factor 1-like [Homo sapiens]
 gi|193787809|dbj|BAG53012.1| unnamed protein product [Homo sapiens]
          Length = 271

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 99/209 (47%), Positives = 142/209 (67%), Gaps = 2/209 (0%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K++E ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG GG EA LF  ++F MY++YAA ++W  E L    ++ GG +  
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PT 
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTD 269


>gi|149003372|ref|ZP_01828261.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
 gi|147758555|gb|EDK65553.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
          Length = 145

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 92/142 (64%), Gaps = 7/142 (4%)

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EKSQHQNRLR 268
              I+V+I  +DI++DT R+ G+GGQ+VN   + VR+THIPTGI+V S+ +++Q+ NR R
Sbjct: 5   DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDR 64

Query: 269 AMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQG-RITDHRINLTL 325
           AMK+L+A+LY +E+++ A E  + +  K +I  G    +IR+Y F+    + DHR +  +
Sbjct: 65  AMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWG---SQIRSYVFTPYTMVKDHRTSFEV 121

Query: 326 YKLEYVLQGYIDDIINPLLTAH 347
            +++ V+ G +D  I+  L   
Sbjct: 122 AQVDKVMDGDLDGFIDAYLKWR 143


>gi|221133260|ref|XP_002171178.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 205

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 100/203 (49%), Positives = 144/203 (70%), Gaps = 1/203 (0%)

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           ++  +      + E+++  Q E+ A +  I +LE  +   ++PKD DD  + I+EIRAGT
Sbjct: 1   EIIELAALGIDNKEMKEFVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGT 60

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
           GG EAA+F  ++  MY++Y++  +WK EVL  S++ DGG KE+   I G GVF ++K E 
Sbjct: 61  GGREAAIFAAEMLSMYDKYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEI 120

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHRVQRVP TE+ GRVHTS  TVAVLP+   IDV + ++D+++DT R+SG+GGQHVNTT
Sbjct: 121 GVHRVQRVPITESLGRVHTSTVTVAVLPQPESIDVVLNMKDVKVDTFRSSGAGGQHVNTT 180

Query: 241 DSAVRITHIPTGIMVT-SSEKSQ 262
           DSAVR+THIP+G++V   S++SQ
Sbjct: 181 DSAVRLTHIPSGLVVAVQSQRSQ 203


>gi|154270254|ref|XP_001535983.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410054|gb|EDN05442.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 223

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 116/214 (54%), Gaps = 30/214 (14%)

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA---------------EIDVDIP 218
            R + E+GVHRVQRVP TE  GR HTSA +V +LP                    D  I 
Sbjct: 2   RRFETEAGVHRVQRVPTTENKGRTHTSAVSVVILPSYPSIIGEGDSELNFDDPNSDYYID 61

Query: 219 LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARL 277
            +++ ++ MRA G+GGQHVN T+SA+R+THIPTGI+V     +SQH+NR +A  +LRAR+
Sbjct: 62  PQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARI 121

Query: 278 YDVERKRMANERSANRKLQIG---SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
               R+    E    R+  +G      R ++IRTYNF Q R TDHR  LTL+ L  +++G
Sbjct: 122 AQQRREAREEEMVKLRRGVMGGVAKMGRGDKIRTYNFGQNRCTDHRSGLTLHNLGSIMEG 181

Query: 335 --YIDDIINPLLTA---------HQAKMIGSASE 357
              ++ I++ +               + +  A E
Sbjct: 182 GDGLEKIMDSVRGWLVDREVDDVFAEEQMKMAQE 215


>gi|315926256|ref|ZP_07922444.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315620443|gb|EFV00436.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 173

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 6/154 (3%)

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           G HR+ R+   +  GR  TS A V VLP       VDIP  D+R+D   ASG GGQ VNT
Sbjct: 1   GTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPGSDLRVDVFHASGPGGQGVNT 60

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           TDSAVR+TH+PTGI+V   +E+SQ QN+  A++VL+A+L +  R+    E ++ +     
Sbjct: 61  TDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGNS 120

Query: 299 SGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYV 331
            G    ++R+Y     + + D R N  +   + V
Sbjct: 121 WGA---QMRSYVLHPYQMVKDLRTNHEVGNTDAV 151


>gi|207109382|ref|ZP_03243544.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 196

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 108/199 (54%), Positives = 146/199 (73%), Gaps = 4/199 (2%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
              +  ++   ++     D E+ +LA+ E+  +E +  +LE  I  LL+PKD +DDK+  
Sbjct: 2   SVLENIKENKELLE----DKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           LE+RAGTGG EA +FVGDLF+ Y RYA L+KWKVE++SSS+N  GGYKEI+A I G+GV+
Sbjct: 58  LELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233
           SR+KFE+G HRVQRVP TE+ GR+HTSA TVA++PE  +++V I   D++I+  RA G G
Sbjct: 118 SRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHG 177

Query: 234 GQHVNTTDSAVRITHIPTG 252
           GQ VNTTDSAVRITH+PT 
Sbjct: 178 GQCVNTTDSAVRITHLPTN 196


>gi|225714246|gb|ACO12969.1| Peptide chain release factor 1 [Lepeophtheirus salmonis]
          Length = 352

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 74/316 (23%), Positives = 135/316 (42%), Gaps = 29/316 (9%)

Query: 47  SKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
           S I       QE + L ++  +       +++ +       +    +    N +L+    
Sbjct: 50  SDIYALQTGLQEIEALKSMAQEEKDFE--KEVLEDLSKLEPQVDELVTRLANNILISNQR 107

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            D  + +LE+  G GG EA++F  ++F +Y  Y          +       G       +
Sbjct: 108 YDQDNAVLEVLPGAGGLEASVFAAEVFNLYCSYCRDYLGYNVEVQEHVETTGASDYFAIS 167

Query: 167 ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRID 225
            +   +                     S R+ TS  +++VLP       +D+   D+ + 
Sbjct: 168 KASILIKG-----------------SKSDRLQTSTRSLSVLPLLTDFSRIDVNPSDLSVT 210

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
             R+SG GGQ VNTT+SAVR+ H PT I       ++ H+N   A++ L+  LY V  ++
Sbjct: 211 YCRSSGPGGQGVNTTNSAVRMIHNPTKISAHCQELRTAHENYGLALEKLKRELYRVMFEK 270

Query: 285 MANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRIN---LTLYKLEYVLQGY-----I 336
             ++ S+ RK QIG  +R+E+IRTY++ +  + DHRI      +  L   ++G      +
Sbjct: 271 ENSKVSSTRKSQIGQMNRNEKIRTYHYGRNTVLDHRIQGVVKQVPNLFDFMKGEYGFTIL 330

Query: 337 DDIINPLLTAHQAKMI 352
           D   + L    + + +
Sbjct: 331 DQFYSFLKDMDEEEQL 346


>gi|226329846|ref|ZP_03805364.1| hypothetical protein PROPEN_03758 [Proteus penneri ATCC 35198]
 gi|225200641|gb|EEG82995.1| hypothetical protein PROPEN_03758 [Proteus penneri ATCC 35198]
          Length = 90

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 43/88 (48%), Positives = 63/88 (71%)

Query: 270 MKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLE 329
           M VL AR+   E ++     ++ R+  +GSGDRS+RIRTYNF QGR+TDHRINLT Y+L+
Sbjct: 1   MSVLGARIRAAEMQKRQEAEASERRNLLGSGDRSDRIRTYNFPQGRVTDHRINLTFYRLD 60

Query: 330 YVLQGYIDDIINPLLTAHQAKMIGSASE 357
            V++G +D +I P++T +QA  + + SE
Sbjct: 61  EVMEGKLDPLIQPIVTEYQADQLSALSE 88


>gi|213580224|ref|ZP_03362050.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 209

 Score =  116 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q   +   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K EV+  S+ +  G K     ISG   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQH 263
           GGQHVN T+SAVRITHIPTGI+    +++SQH
Sbjct: 178 GGQHVNRTESAVRITHIPTGIVTQCQNDRSQH 209


>gi|407639|gb|AAD12326.1| unknown [Mycoplasma genitalium]
          Length = 113

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/113 (49%), Positives = 81/113 (71%), Gaps = 1/113 (0%)

Query: 240 TDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
           T+SAVRITH+PTGI+V     KSQ  NR +AMK+LRA+L++  + +  + ++  RK Q+G
Sbjct: 1   TESAVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNKQLSTQADLRKSQVG 60

Query: 299 SGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKM 351
           SG+R+E+IRTYN+ Q RITDHRI LT+ KL  V+ G +D+II  L    + ++
Sbjct: 61  SGERAEKIRTYNYPQNRITDHRIKLTINKLNTVILGDLDEIIEALQADERTQL 113


>gi|302781616|ref|XP_002972582.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii]
 gi|300160049|gb|EFJ26668.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii]
          Length = 163

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 77/140 (55%), Positives = 104/140 (74%), Gaps = 7/140 (5%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R+HTS A+VA+LPE  E+DVDI  ++I+IDT RA G+ GQHVNTT SAVR+TH+PTGI+V
Sbjct: 1   RIHTSTASVAILPEVNEVDVDIRNDEIKIDTYRAGGADGQHVNTTCSAVRVTHVPTGIVV 60

Query: 256 T-SSEKSQH------QNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
               E+S+H      +N+ +A+ +L ARLY++ER R A  RS  ++ QIGS DRSE IRT
Sbjct: 61  AIQDERSRHKEGPSARNKAKALSILYARLYELERSRAAASRSELQQDQIGSSDRSESIRT 120

Query: 309 YNFSQGRITDHRINLTLYKL 328
           YNF Q R+TDHR+ +T + +
Sbjct: 121 YNFPQDRVTDHRVGVTQHSI 140


>gi|323333643|gb|EGA75036.1| Mrf1p [Saccharomyces cerevisiae AWRI796]
          Length = 311

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 95/256 (37%), Positives = 136/256 (53%), Gaps = 14/256 (5%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           L  KQ    +    +++  +S     D  +   + YA +S +      Y +K  E + L 
Sbjct: 52  LLVKQAEKYEAELKDLDKDLSCGIHFD--VNKQKHYAKLSALTDTFIEYKEKLNELKSLQ 109

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +I    SD  +R  A+ E   +  +     + +   LLP     DK  +LE+R G GG 
Sbjct: 110 EMIV---SDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGI 166

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGV 182
           EA +F  +L  MY  YA  RKWK  ++S ++N+ G G  + + +I   G + R++FE+GV
Sbjct: 167 EAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGV 226

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPE--------AAEIDVDIPLEDIRIDTMRASGSGG 234
           HRVQR+P+TE  GR HTS A V VLP+            +      +IR+D MRASG GG
Sbjct: 227 HRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGG 286

Query: 235 QHVNTTDSAVRITHIP 250
           QHVNTTDSAVR+THIP
Sbjct: 287 QHVNTTDSAVRLTHIP 302


>gi|255637443|gb|ACU19049.1| unknown [Glycine max]
          Length = 155

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 3/142 (2%)

Query: 207 LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQN 265
           L     ++V+IP ED+ I   RA G GGQ+VN  ++AVRITHIPTG+ V  + E+SQ  N
Sbjct: 3   LLPDESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLAN 62

Query: 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLT 324
           ++RA+  L+A+L  +  ++ A+E    R   +   +  ++IR Y F   + + D R    
Sbjct: 63  KIRALSRLKAKLLVIAEEQRASEIKQIRGDAVK-AEWGQQIRNYVFHPYKLVKDVRTGHE 121

Query: 325 LYKLEYVLQGYIDDIINPLLTA 346
              +  V+ G +D  I   L  
Sbjct: 122 TTDITSVMDGELDPFIKSYLKH 143


>gi|323452428|gb|EGB08302.1| hypothetical protein AURANDRAFT_13671 [Aureococcus anophagefferens]
          Length = 235

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 11/233 (4%)

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
                     D   C LEI AG GG +A  +   + RMY R+   R + V     S+ D 
Sbjct: 1   ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60

Query: 158 GGYKE-IVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD 216
            G  + +   I G   F   + E G HR+ R     ++ +  TS A+V   P+  +   D
Sbjct: 61  PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120

Query: 217 IP-------LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLR 268
           +P         D+ + T RA G+GGQ+VN  ++AVR+TH+PTG+ V  + E++Q  N+  
Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRVTHVPTGLRVRCARERTQGANKAI 180

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHR 320
           A+ +LRA+L     ++ A   +  R  ++   D    +R+Y     + + D R
Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADIRGDRVA-ADFGASVRSYVLHPYKLVKDDR 232


>gi|145629735|ref|ZP_01785531.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
 gi|144978072|gb|EDJ87851.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
          Length = 102

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 72/97 (74%)

Query: 261 SQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR 320
              +N+ +AM VL +R+   E++R A E++  R+  +GSGDRS++IRTYN+ QGR+TDHR
Sbjct: 4   HSTKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIRTYNYPQGRVTDHR 63

Query: 321 INLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           INLT+Y+L+ V+ G ID++I P++T +QA  + + SE
Sbjct: 64  INLTIYRLDEVINGKIDELIQPIITEYQADQLAALSE 100


>gi|325067255|ref|ZP_08125928.1| peptide chain release factor 1 [Actinomyces oris K20]
          Length = 397

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 102/219 (46%), Positives = 136/219 (62%), Gaps = 16/219 (7%)

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
              +  +             EV A+E         +  +L+P+D DD +  I+E++AG G
Sbjct: 173 ARELAAEDED-------FAAEVPALEAAEAAACEHLREVLVPRDPDDSRDVIIEVKAGEG 225

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI-------SGRGVFS 174
           G E+ALF  DL RMY RYA  + W VEVL ++D+D GGYK++   I          GV++
Sbjct: 226 GEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAIKARGPVEPQDGVWA 285

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV-DIPLEDIRIDTMRASGSG 233
            +K+E GVHRVQRVP TE+ GR+HTSAA V V+PEA +     I   D+RID  R+SG G
Sbjct: 286 HLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPG 345

Query: 234 GQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMK 271
           GQ VNTTDSAVRITH+PTGI+V+  +EKSQ QN+  AM+
Sbjct: 346 GQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMR 384


>gi|82538743|ref|XP_723804.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23478225|gb|EAA15369.1| peptide chain release factor 1 [Plasmodium yoelii yoelii]
          Length = 358

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 93/309 (30%), Positives = 151/309 (48%), Gaps = 13/309 (4%)

Query: 34  KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIREL 93
           K+T+       +       D  KQ   +   +    + +S+  D       +  KEI   
Sbjct: 24  KITKIQNMSKQLKIAWEELDIYKQLLTENMKLTLRKDEESKKIDTINFNDYSEVKEIIYN 83

Query: 94  ENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSS 153
              I   ++ +  D   + I+    G GG EA +F  +LF MYE +  L+ ++  + ++ 
Sbjct: 84  LENICDSIVKQLLDIYTNFIV---PGVGGQEAKMFANELFSMYEHFCKLKNYECLIKNNK 140

Query: 154 DNDDG--GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA 211
             ++G   YK IVA I G GV+     E G+HRVQR+P    S ++ TS + V +  E  
Sbjct: 141 LIEEGKGIYKNIVADIKGEGVYIDFIQEIGIHRVQRIPI--NSKKMQTSTSIVLLFDEKQ 198

Query: 212 -----EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQN 265
                E  + IP  +  I+T R+ G+GGQ VN  ++ V+I H PT I V      SQ QN
Sbjct: 199 TKEKLEKKMKIPKNEFLIETKRSGGAGGQSVNKNETCVKIIHKPTNIFVEVQKTSSQIQN 258

Query: 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
           +  AM++++ +LY+   ++       ++K Q  +GDRSE+IRTYNFS   + DH  N+  
Sbjct: 259 KSIAMEMIKNKLYNFYYEQEKINFLKDKKNQKQNGDRSEKIRTYNFSHNTVIDHIANVQY 318

Query: 326 YKLEYVLQG 334
             ++   +G
Sbjct: 319 TGIDQFFKG 327


>gi|195351215|ref|XP_002042131.1| GM10257 [Drosophila sechellia]
 gi|194123955|gb|EDW45998.1| GM10257 [Drosophila sechellia]
          Length = 166

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 73/154 (47%), Positives = 101/154 (65%), Gaps = 4/154 (2%)

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
           P  A+I V I  +D++I+T RASG+GGQHVNTTDSAVRI H+PTG+ V   SE+SQ +NR
Sbjct: 1   PRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNR 60

Query: 267 LRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRI-NLTL 325
             AMK LR+RL   + + +   + A +K Q GS +R+E+IRTYNF Q RITDHRI   TL
Sbjct: 61  ELAMKRLRSRLVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTL 120

Query: 326 YKLEYVLQG--YIDDIINPLLTAHQAKMIGSASE 357
           + L+  L+G   +  +I  L   H+ + +    +
Sbjct: 121 HNLDGFLKGGDQLSGLIEKLQLEHRRERLKELLD 154


>gi|221060184|ref|XP_002260737.1| Peptide chain release factor [Plasmodium knowlesi strain H]
 gi|193810811|emb|CAQ42709.1| Peptide chain release factor, putative [Plasmodium knowlesi strain
           H]
          Length = 263

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 79/216 (36%), Positives = 113/216 (52%), Gaps = 8/216 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR- 170
             +E R G GG EA L+  +L   Y+ +A     +VE +  +             I+   
Sbjct: 24  VRIEFRPGVGGEEAFLWSTELLNTYKAFAERINCRVERVHDASESLLVVSPSDVCITQEG 83

Query: 171 -----GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRI 224
                 ++  +K ESG+H+V+RVP  E+ G++H+S AT+AV L E  +   +I L+D+RI
Sbjct: 84  YEIKTTLYDLLKNESGIHQVKRVPRNESKGKIHSSTATIAVFLHEDEQKKDEINLKDLRI 143

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERK 283
            T R+S  GGQ+VN  +S V I H PTGI      E++Q  N+  AMK L  ++     K
Sbjct: 144 TTFRSSKPGGQNVNKIESGVSILHKPTGIKTECQEERTQEMNKKIAMKRLIQKVLQFRHK 203

Query: 284 RMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +   E    R   I    RS RIRTYNF +G ITDH
Sbjct: 204 QSEEELRGERAKLIKDSSRSSRIRTYNFFRGYITDH 239


>gi|23335364|ref|ZP_00120601.1| COG1186: Protein chain release factor B [Bifidobacterium longum
           DJO10A]
          Length = 240

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 6/203 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +  LK    ++E + +     D      +  + +S   S++   +   Q   D+ T++ 
Sbjct: 25  DVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVE 84

Query: 68  D--HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                 D +  D AQ E+  I+K++ ++E +           D++S ++ IR+G GG +A
Sbjct: 85  LGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTL----LDGEYDERSAVVTIRSGAGGVDA 140

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
           A F   L RMY RY     +K +V+ +S  ++ G K     +     + R+  E G HR+
Sbjct: 141 ADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRL 200

Query: 186 QRVPATEASGRVHTSAATVAVLP 208
            R+   +  GR  TS A V V+P
Sbjct: 201 VRISPFDNQGRRQTSFAAVEVVP 223


>gi|213861334|ref|ZP_03385804.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 197

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 6/200 (3%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q   +   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173
           L+I+AG+GG+EA  +   L RMY R+A  R +K EV+  S+ +  G K     ISG   +
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAY 117

Query: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLE-DIRIDTMRASGS 232
             ++ E+GVHR+ R    ++ GR HTS ++  V PE  +         D+RID  RASG+
Sbjct: 118 GWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGA 177

Query: 233 GGQHVNTTDSAVRITHIPTG 252
           GGQHVN T+SAVRITHIPTG
Sbjct: 178 GGQHVNRTESAVRITHIPTG 197


>gi|301347115|ref|ZP_07227856.1| peptide chain release factor 2 [Acinetobacter baumannii AB056]
 gi|301512357|ref|ZP_07237594.1| peptide chain release factor 2 [Acinetobacter baumannii AB058]
 gi|301597511|ref|ZP_07242519.1| peptide chain release factor 2 [Acinetobacter baumannii AB059]
          Length = 113

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 6/114 (5%)

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--AN 292
           H+N TDSAVR+THIPTGI+V   +++SQH NR  A K LRA+LY++E ++         +
Sbjct: 1   HINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALED 60

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            K  IG G    +IR+Y     RI D R  +       VL G +D  I   L  
Sbjct: 61  SKSDIGWG---SQIRSYVLDDSRIKDLRTGVENSNTGAVLDGDLDRFIEASLKQ 111


>gi|289178305|gb|ADC85551.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 115

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 1/110 (0%)

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           +THIPTGI+V+   EKSQ QNR  A++VL++RL  ++ ++ A E +  R  Q+ S DRSE
Sbjct: 1   MTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSE 60

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGS 354
           RIRTYNF + RI DHR N   Y L+ VL G +  +I+  + A + + + S
Sbjct: 61  RIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEEQRLAS 110


>gi|71900159|ref|ZP_00682300.1| PCRF [Xylella fastidiosa Ann-1]
 gi|71730108|gb|EAO32198.1| PCRF [Xylella fastidiosa Ann-1]
          Length = 270

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 106/180 (58%), Gaps = 7/180 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M     +++  L  R  E+E  +S+       D +   + E A ++PI + ++   + K 
Sbjct: 1   MKPTLRRKLEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKA 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +     T+     +D E+R+LA+ E+   +  +  L+ ++  LL+P+D  D+ +  LE+R
Sbjct: 61  DLAAAETL----RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVR 116

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
           AGTGG EAA+F G+LFRMY RYA  ++WKVEV S +  + GGYKEI+A I GRG +SR+K
Sbjct: 117 AGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLK 176


>gi|124808906|ref|XP_001348439.1| peptide chain release factor 1, putative [Plasmodium falciparum
           3D7]
 gi|23497333|gb|AAN36878.1|AE014820_28 peptide chain release factor 1, putative [Plasmodium falciparum
           3D7]
          Length = 304

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 88/245 (35%), Positives = 128/245 (52%), Gaps = 9/245 (3%)

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVL-SSSDNDDGGYKEI 163
             D+     +E R G GG EA  +  +L   Y+ +A   K KVE +   SD+     KE 
Sbjct: 59  YNDNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKEN 118

Query: 164 VATISGR-----GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVL-PEAAEIDVDI 217
           +  I         ++   K ESG+H+V+R+P  ++  R+H+S ATVA+   +  E   +I
Sbjct: 119 LRIIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEI 178

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRAR 276
            L+D++I T R+S  GGQ+VN  +S V I H PTG       E++Q  N+  AMK L  +
Sbjct: 179 NLKDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQK 238

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYI 336
           +  +E K   N     R   I   +RS RIRTYNF +G ITDH IN     L Y  +G +
Sbjct: 239 IQHMESKEKENMVQHERAKLIKESNRSNRIRTYNFFRGYITDH-INKKKIDLIYFEKGKL 297

Query: 337 DDIIN 341
           + I+N
Sbjct: 298 EYILN 302


>gi|289806630|ref|ZP_06537259.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 97

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/94 (44%), Positives = 66/94 (70%)

Query: 264 QNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINL 323
           + + +A+ VL AR++  E  +     ++ R+  +GSGDRS+R RTYNF QGR+TDHRINL
Sbjct: 2   KTKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINL 61

Query: 324 TLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           TLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 62  TLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 95


>gi|331674376|ref|ZP_08375136.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280]
 gi|331068470|gb|EGI39865.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280]
          Length = 184

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 8/189 (4%)

Query: 23  MSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           M +    +       L +E +++  ++  +    Q  ++   L  +  + + +    +  
Sbjct: 1   MEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAV 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                A    + E   ++ +  +     D   C L+I+AG+GG+EA  +   L RMY R+
Sbjct: 61  -----AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRW 115

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHT 199
           A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ R    ++ GR HT
Sbjct: 116 AESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHT 175

Query: 200 SAATVAVLP 208
           S ++    P
Sbjct: 176 SFSSAVCYP 184


>gi|325114215|emb|CBZ49772.1| putative peptide chain release factor 1 [Neospora caninum
           Liverpool]
          Length = 489

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 62/308 (20%)

Query: 94  ENEINYLLLPKDTDDDKSC-ILEIRAGTGGSEAALFVGDLFRMYERYAALRK-WKVEVLS 151
           E      L+P++ + + +  I+EIR   GG EA L+  DL  MY R+  L+K W+   L 
Sbjct: 182 EAIEKVALMPEEENKNANVAIVEIRPAAGGEEAQLWATDLAEMYTRFFELQKTWRFAQLQ 241

Query: 152 SSDNDDG-----------------------------------------GYKEIVATISGR 170
            +  + G                                         G   I   + G 
Sbjct: 242 LAGPNAGSKSPALQRRDDAAPARRKSRAGSSRPTSKEEERNAVSGALGGVTCIAFRVEGP 301

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
           GV+ ++  ESGVHRVQRVP TE                      V +   D+ I T R+S
Sbjct: 302 GVYRQLLKESGVHRVQRVPRTETQN----------------FQGVALDEADLVIRTARSS 345

Query: 231 GSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQ+VN  ++AV + H PTGI +    E++Q  N+  A ++L  +L     + +  + 
Sbjct: 346 GCGGQNVNKVETAVDLLHAPTGIRIFCQQERTQAANKKAAKEILLKKLAARHEEEVVQQM 405

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHR-INLT-LYKLEYVLQGYIDDIINPLLTAH 347
              R+ Q+ SG RSER+RTYNF  GR+ +HR      L+ L+ +L+G +  +   L    
Sbjct: 406 REERREQVCSGLRSERVRTYNFRDGRVNEHRLTGGEGLFALKPILEGQLHALHARLDRQE 465

Query: 348 QAKMIGSA 355
             + +   
Sbjct: 466 AEQRVRQM 473


>gi|301346253|ref|ZP_07226994.1| peptide chain release factor 2 [Acinetobacter baumannii AB056]
 gi|301513591|ref|ZP_07238828.1| peptide chain release factor 2 [Acinetobacter baumannii AB058]
 gi|301596660|ref|ZP_07241668.1| peptide chain release factor 2 [Acinetobacter baumannii AB059]
          Length = 201

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 6/206 (2%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           + +E   +  +I+ +     + ++ + +  +  + + +S + D+      +      E  
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQ-----SELSTAEEEL 55

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
            ++ +  +  +  D   C +EI+AG+GG+EA  +   L RMY R+     +K E++  SD
Sbjct: 56  AKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSD 115

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE-AAEI 213
            D  G K     + G   +  ++ ESGVHR+ R    ++  R HTS + V + PE    I
Sbjct: 116 GDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNI 175

Query: 214 DVDIPLEDIRIDTMRASGSGGQHVNT 239
           ++DI   D+R DT RASG+GGQH+N 
Sbjct: 176 EIDINPSDVRTDTYRASGAGGQHINK 201


>gi|270289542|ref|ZP_06195844.1| peptide chain release factor 2 [Chlamydia muridarum Weiss]
          Length = 182

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 78/168 (46%), Positives = 104/168 (61%), Gaps = 2/168 (1%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A    WKVEV+   D +  G K I   + G   +   K ESGVHR+ R+   +++
Sbjct: 1   MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            + HTS A+V V PE  +  +V+I   DIRIDT R+SG+GGQHVN TDSAVRITH PTGI
Sbjct: 61  AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSG 300
           +V   SE+SQ QNR   M +LRAR+Y    +    +++ NRK +  S 
Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKKSA 168


>gi|156101992|ref|XP_001616689.1| peptide chain release factor 1 [Plasmodium vivax SaI-1]
 gi|148805563|gb|EDL46962.1| peptide chain release factor 1, putative [Plasmodium vivax]
          Length = 263

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 8/216 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR- 170
             +E R G GG EA L+  +L   Y+ +A     +VE +  +             I+ + 
Sbjct: 24  IRIEFRPGVGGEEALLWSRELLNTYKTFAERMNCRVERVHDAGESLVVTSPSDVCIAKQG 83

Query: 171 -----GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV-LPEAAEIDVDIPLEDIRI 224
                 ++   K ESG+H+V+RVP  E+ G++H+S AT+AV L        ++ L+D+RI
Sbjct: 84  QEIKASLYDLFKNESGIHQVKRVPRNESKGKIHSSTATIAVFLHTDEHRKDEVNLKDLRI 143

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERK 283
            T R+S  GGQ+VN  +S V I H PTG+      E++Q  N+  A+K L  ++  +  K
Sbjct: 144 KTFRSSKPGGQNVNKIESGVSILHKPTGMQTECQEERTQEMNKKIALKRLTEKISHLRHK 203

Query: 284 RMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +   +    R   +    RS RIRTYNF +G ITDH
Sbjct: 204 QSEEQLRRERSKLVKDSSRSRRIRTYNFFRGYITDH 239


>gi|225631245|ref|ZP_03787932.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591056|gb|EEH12251.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 178

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 108/178 (60%), Gaps = 3/178 (1%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
               + DLK +F +IE  +    ++    +I L++EY+ + PII  I  Y+  K+E  DL
Sbjct: 1   MENNLQDLKKKFNDIERNLENPTNLSQKEFITLSKEYSELRPIIKIIDEYNTLKEEISDL 60

Query: 63  HTVIGDHNSDSEIRD-LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
             ++ D NS+ +I++   +      +  + +++ ++   LLPKD DD ++ ILEIRAGTG
Sbjct: 61  EEIMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTG 120

Query: 122 GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
           G EAALF   LFRMY++YA  R WK E +S S+   GGYKE  A I+G  VF+R+KFE
Sbjct: 121 GEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFE 178


>gi|163803384|ref|ZP_02197260.1| putative peptide chain release factor 2 [Vibrio sp. AND4]
 gi|159172846|gb|EDP57688.1| putative peptide chain release factor 2 [Vibrio sp. AND4]
          Length = 193

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 5/195 (2%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              +    L +E A++  I+  I   +Q  ++ + L  +  +        ++        
Sbjct: 3   NEPERAQALGKERASLEAIVETIVQLEQGVEDVEGLLELAVEEEDQETFDEIEPE----- 57

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
             E+     ++ +  +     D   C ++++AG+GG+EA  +   + RMY R+A  + +K
Sbjct: 58  LAELEGKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFK 117

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
            EV+  S+ +  G K     ISG   +  ++ E+GVHR+ R    ++ GR HTS A+  +
Sbjct: 118 SEVIEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFI 177

Query: 207 LPEAAEIDVDIPLED 221
            PE  +         
Sbjct: 178 YPEIDDNINIDINPS 192


>gi|82540995|ref|XP_724771.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479536|gb|EAA16336.1| peptide chain release factor 1 [Plasmodium yoelii yoelii]
          Length = 2075

 Score =  106 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 7/284 (2%)

Query: 43   SPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
              +   I+     +     +++      +  +  +             +   N     L 
Sbjct: 1770 ENVSESITQNISGQNNISIIYSTNILRLNIKKNFENEPSIRKLCVLRPKRSLNNEKPFLN 1829

Query: 103  PKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKE 162
             ++  +     +E R+G GG EA L+  +L ++Y+ YA  +K  V+ +  + N       
Sbjct: 1830 SENVLNKNHVRIEFRSGIGGDEAELWSNELKKIYQNYAEKKKCTVKSVKDATNSLIIKSP 1889

Query: 163  IVATIS------GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD 216
                I+         ++   K ESG+H+V+R+P  E   ++ +S AT+AV  +      +
Sbjct: 1890 NDVKINKEGEEIQISLYDLFKNESGIHQVKRIPKNENKEKIQSSTATIAVFIQDYANKYE 1949

Query: 217  IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
            I  +D++I T R+S  GGQ+VN  +SAVRI H  TGI   +  E++Q  N+  AMK L  
Sbjct: 1950 INSKDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESQKERTQELNKKIAMKKLTQ 2009

Query: 276  RLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
            +++D+  +         R        RS RIRTYNF  G ITDH
Sbjct: 2010 KIHDLRNREKEQSLQNERSKFTKDCSRSNRIRTYNFFTGYITDH 2053


>gi|56808306|ref|ZP_00366070.1| COG1186: Protein chain release factor B [Streptococcus pyogenes M49
           591]
          Length = 214

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 5/218 (2%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           ++   A +E  M+E    +  I   +    ++ +  K   +   ++   +   ++   + 
Sbjct: 1   MEEEIALLENHMTEPDFXNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D  +++  +  ++     + ++       LL  +  D  + ILEI  G+GG+EA  +   
Sbjct: 61  DDSLKEELEENLMQ----LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY R+     +KVEVL     D+ G K +  +  G   +  +K E GVHR+ R+   
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMR 228
           +++ R HTS A+V V+PE    I+V++  +DI++DT +
Sbjct: 177 DSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFQ 214


>gi|99034620|ref|ZP_01314576.1| hypothetical protein Wendoof_01000612 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 89

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/89 (57%), Positives = 69/89 (77%), Gaps = 1/89 (1%)

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKL 328
           A+KVLRARLY++ER++   ERS  RK QIGSGDRSERIRTYNF Q RITDHRINLT ++L
Sbjct: 1   ALKVLRARLYEIERQKKEMERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRL 60

Query: 329 EYVL-QGYIDDIINPLLTAHQAKMIGSAS 356
           E ++ +G +D+ I  L++ ++A+ +   S
Sbjct: 61  EQIIKEGELDEFIEALISRNEAERLAGES 89


>gi|226510582|ref|NP_001146175.1| hypothetical protein LOC100279745 [Zea mays]
 gi|219886065|gb|ACL53407.1| unknown [Zea mays]
          Length = 184

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 83/164 (50%), Positives = 115/164 (70%), Gaps = 1/164 (0%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY+RY     WK + +S S+ + GGYK  V  + G+ V+S++KFESGVHRVQRVP TEA 
Sbjct: 1   MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI- 253
           GRVHTS ATVA++PEA E+DV I  +DI + T R+ G+GGQ+VN  ++AV + H PTGI 
Sbjct: 61  GRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGIR 120

Query: 254 MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
           +  + E+SQ QNR RA ++LRA+LY+++ +         RKLQ+
Sbjct: 121 IFCTEERSQLQNRERAFQLLRAKLYEIKLREQQESLRNQRKLQV 164


>gi|116248645|gb|ABJ90461.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis]
          Length = 158

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 88/158 (55%), Positives = 117/158 (74%), Gaps = 2/158 (1%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY RYA  +KWKVEV+S+++ + GGYKE++A ISG GV+ ++KFESGVHRVQRVP TE+ 
Sbjct: 1   MYSRYAEDKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQRVPETESQ 60

Query: 195 GRVHTSAATVAVL-PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           GRVHTSA TVAV+        + I   D+++DT RASG+GGQHVN TDSA+R+THIPTG+
Sbjct: 61  GRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGV 120

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           +V    ++SQH+NR +AM VL ARL   E ++     +
Sbjct: 121 VVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEA 158


>gi|255024491|ref|ZP_05296477.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
          Length = 165

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 59/164 (35%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++  +++R+ E+   +S+   V    +L   ++E + I+  +     Y    ++  +  
Sbjct: 3   DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            ++G+   D E+R++A+ E+  ++KE  +LE  +  LL+PKD +DDK+ ILEIR   GG 
Sbjct: 63  ELLGEKLDD-EMREMAKEELAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGD 121

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           EAALF GDLFRMY +YA  R WKVE++ ++    GGYKEI+A +
Sbjct: 122 EAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165


>gi|156094764|ref|XP_001613418.1| peptide chain release factor [Plasmodium vivax SaI-1]
 gi|148802292|gb|EDL43691.1| peptide chain release factor, putative [Plasmodium vivax]
          Length = 334

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 42/302 (13%)

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY-- 139
              +     + L + I   +         SC L + +GTGG+EA  F   L+ MY +Y  
Sbjct: 35  CKSSKRVSKKCLSSYIKKDVENYSKYFKNSCSLILSSGTGGTEACDFCSMLYNMYMKYLS 94

Query: 140 --AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
                +  K EV+  S N+  G K++   I G   F     E G+HR+ R     A  + 
Sbjct: 95  KLKNKKNIKYEVIDLSKNEV-GIKKVEIKIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKK 153

Query: 198 HTSAATVAVLP------------------------------EAAEIDVDIPLEDIRIDTM 227
            TS   V V+P                                   ++ +   D+ I TM
Sbjct: 154 MTSFVKVDVIPTLSYNDTNVINFLNIAESSSPSVKKNMNSRNINVNEIALNKSDLVIQTM 213

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+ G GGQ+VN  ++AVRI H PT I V  SSE+SQ  N+  A+K +  +L  ++ + + 
Sbjct: 214 RSGGKGGQNVNKVETAVRILHKPTNISVKVSSERSQILNKRIALKTIYEKLLYLQLEALK 273

Query: 287 NERSA-NRKLQIGSGDRSERIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDDIINPL 343
           N++   + K     G   E+IR Y  +    I D R N++   ++ VL QG I+  ++  
Sbjct: 274 NKKYEFSNKSLTHFG---EQIRNYILYGNKMIKDTRTNVSSTDVDRVLSQGEIELFVDAY 330

Query: 344 LT 345
             
Sbjct: 331 KK 332


>gi|70951470|ref|XP_744973.1| peptide chain release factor 1 [Plasmodium chabaudi chabaudi]
 gi|56525140|emb|CAH78733.1| peptide chain release factor 1, putative [Plasmodium chabaudi
           chabaudi]
          Length = 260

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 7/234 (2%)

Query: 93  LENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSS 152
           L N            +     +E R G GG EA L+  +L + Y+ YA  +K  V+ +  
Sbjct: 5   LFNLHINKENVFLNKNKNHIRIEFRPGIGGDEAELWSNELKKTYQNYAEKKKCSVKSVKD 64

Query: 153 SDNDDGGYKEIVATIS------GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
             N           I+         ++   K ESG H+V+R+P  E+  ++H+S AT+A+
Sbjct: 65  ITNSIIIKSPTDVQINKDGEEIQISLYDLFKNESGTHQVKRIPKNESKDKIHSSTATIAI 124

Query: 207 LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQN 265
             +      +I  +D++I T R+S  GGQ+VN  +S VRI HIPTG    +  E++Q  N
Sbjct: 125 FIQDDADKYEINSKDLKIMTFRSSKPGGQNVNKIESGVRIVHIPTGIQTESQEERTQELN 184

Query: 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDH 319
           +  AMK L  +++D+  +    E    R   +    RS RIRTYNF  G ITDH
Sbjct: 185 KRIAMKKLTQKIHDLRSREKEEELQNERSKLVKKCHRSSRIRTYNFFTGYITDH 238


>gi|88607753|ref|YP_505069.1| peptide chain release factor 2, truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598816|gb|ABD44286.1| peptide chain release factor 2, truncated [Anaplasma
           phagocytophilum HZ]
          Length = 226

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 7/222 (3%)

Query: 26  SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLA 85
               +    L  E + +S +++   + +++ ++  +L  +I D +            + A
Sbjct: 2   EDDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDD-----RDFLATINA 56

Query: 86  IEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA-LRK 144
             + ++   ++     +     D  SC L IR+G GG+E++ +V  L RMY ++A    +
Sbjct: 57  ELQSLKLRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHE 116

Query: 145 WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATV 204
           + VE + S D ++ G K +   I G G +   + ESG+HR+ R+   + + + HTS A+V
Sbjct: 117 FTVETVDSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASV 176

Query: 205 AVLPEAAEIDVDIP-LEDIRIDTMRASGSGGQHVNTTDSAVR 245
            V P            +D+RIDT RASG+GGQHVN T+SAVR
Sbjct: 177 EVSPVVDHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVR 218


>gi|121730460|ref|ZP_01682775.1| conserved domain protein [Vibrio cholerae V52]
 gi|121627803|gb|EAX60412.1| conserved domain protein [Vibrio cholerae V52]
          Length = 156

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 56/156 (35%), Positives = 91/156 (58%), Gaps = 5/156 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   + +  L++EY+ +  I      Y Q K+
Sbjct: 1   MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +      +  +   D+E+R++AQ E+ A +  I  L +E+  LLLPKD +DD++C LEIR
Sbjct: 61  DLVAAEEMAQE--DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSS 153
           AG GG EA +F GDLFRMY R+A  + W++EV+SSS
Sbjct: 119 AGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSS 154


>gi|221051906|ref|XP_002257529.1| peptidyl-trna hydrolase [Plasmodium knowlesi strain H]
 gi|193807359|emb|CAQ37864.1| peptidyl-trna hydrolase, putative [Plasmodium knowlesi strain H]
          Length = 334

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 82/306 (26%), Positives = 129/306 (42%), Gaps = 42/306 (13%)

Query: 78  LAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYE 137
            + +         + L + I   +         SC L + +GTGG+EA  F   L+ MY 
Sbjct: 31  YSFLCKSVKRVSKKCLSSYIRKDVENYSKYFKNSCSLILSSGTGGTEACDFCSMLYNMYM 90

Query: 138 RY----AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEA 193
           +Y       +  K EV+  S N+  G K++   I G   F     E G+HR+ R     A
Sbjct: 91  KYLSKLKNKKNIKYEVMDLSKNEV-GIKKVEIKIDGEYSFYNFVSEKGIHRMVRNSPFNA 149

Query: 194 SGRVHTSAATVAVLP------------------------------EAAEIDVDIPLEDIR 223
             +  TS   V V+P                                   ++ +   D+ 
Sbjct: 150 QNKKMTSFVKVDVIPTLSYNDTNVINFLNIAESSSTPVKKTLNSRNINVNEIPLNKSDLV 209

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           I TMR+ G GGQ+VN  ++AVRI H PT I V  SSE+SQ  N+  A+K +  +L  ++ 
Sbjct: 210 IQTMRSGGKGGQNVNKVETAVRILHKPTNISVKVSSERSQILNKRIALKTIYEKLLYLQL 269

Query: 283 KRMANERSA-NRKLQIGSGDRSERIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDDI 339
           + + N++   + K     G   E+IR Y  +    I D R N+    ++ VL QG I+  
Sbjct: 270 EALKNKKYEFSNKSLTHFG---EQIRNYILYGNKMIKDTRTNVFSTDVDRVLSQGEIELF 326

Query: 340 INPLLT 345
           ++    
Sbjct: 327 VDAYKK 332


>gi|194697006|gb|ACF82587.1| unknown [Zea mays]
          Length = 95

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 1/94 (1%)

Query: 264 QNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINL 323
            N+ +A+KVLRARLY++ER+R+  +RS  R  QIGSGDRSERIRTYNF QGR+TDHR+ +
Sbjct: 1   MNKAKALKVLRARLYELERRRLHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGV 60

Query: 324 TLYKLEYVLQGY-IDDIINPLLTAHQAKMIGSAS 356
           T + +  V++G  +D  ++ LL   +   I S  
Sbjct: 61  THHSIADVMEGESLDMFVDALLLQEEMDAIASFG 94


>gi|226320937|ref|ZP_03796485.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233639|gb|EEH32372.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 88

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 51/85 (60%), Positives = 66/85 (77%)

Query: 270 MKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLE 329
           MK+LRARLY+ E  +   +RS+NRK Q+GSGDRSERIRTYNF Q RITDHR N+TLYKLE
Sbjct: 1   MKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSERIRTYNFPQNRITDHRANITLYKLE 60

Query: 330 YVLQGYIDDIINPLLTAHQAKMIGS 354
             +QG +D +++PL+ A Q + + S
Sbjct: 61  EFMQGELDPLLDPLMIALQEQELKS 85


>gi|297604413|ref|NP_001055378.2| Os05g0375600 [Oryza sativa Japonica Group]
 gi|255676317|dbj|BAF17292.2| Os05g0375600 [Oryza sativa Japonica Group]
          Length = 407

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 134/323 (41%), Gaps = 14/323 (4%)

Query: 27  PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAI 86
              D   K  E  +A++  I  +      + + ++   +      D    +L +      
Sbjct: 95  NLWDNPAKSHETLSALADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTS 154

Query: 87  EKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
                 L+    Y LL    D + +CI+     T GS+  +F      MY  +A  +  K
Sbjct: 155 VDATEFLDRYQMYKLLKGPYDKEGACII----VTAGSDERIFC-----MYSSWARKQGCK 205

Query: 147 VEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV 206
             ++    +  G        I    +F  +  E G HR+   P+ + +G    ++A V +
Sbjct: 206 DGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIY-PSVDNAGTYEATSARVDI 264

Query: 207 LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EKSQHQN 265
           +P   +  V++ L++  ++ +  S S  +  +  +SA+R+ HI TG+   SS E+S   N
Sbjct: 265 IPLFLDRPVNLHLDENDLE-ISPSPSDHKRRDHRNSAIRVQHIRTGVTAESSGERSYFAN 323

Query: 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF-SQGRITDHRINLT 324
           +++A+  L+A+L  + R+  ++     ++  +     S   R Y F  Q  + D    L 
Sbjct: 324 KMKAISRLKAKLLVISRELRSSNLKTIKRQTVEE-LYSRETRRYKFGPQKLVHDLNTGLQ 382

Query: 325 LYKLEYVLQGYIDDIINPLLTAH 347
           L +L  VL G ID  I   + + 
Sbjct: 383 LSELNSVLDGDIDPFIRGRIVSR 405


>gi|325066842|ref|ZP_08125515.1| peptide chain release factor RF1 [Actinomyces oris K20]
          Length = 68

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 36/64 (56%)

Query: 294 KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353
           + Q+ + DRSERIRTYNF + RI DHR     Y L+ VL G +  +I   +   +A+ + 
Sbjct: 1   RSQVRTVDRSERIRTYNFPENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMDEAERLS 60

Query: 354 SASE 357
              E
Sbjct: 61  QVGE 64


>gi|328466430|gb|EGF37577.1| peptide chain release factor 2 [Lactobacillus rhamnosus MTCC 5462]
          Length = 189

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 2/187 (1%)

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
           D    DL   E   ++    +L ++    LL     D  + ILEI  G GG+E+  +   
Sbjct: 4   DEPDPDLQHEEETKLKDLQEKL-DQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSM 62

Query: 132 LFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT 191
           L RMY+R+A    +KVEV      D+ G K +   I+G   +  +K E GVHR+ R+   
Sbjct: 63  LMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPF 122

Query: 192 EASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
           +++GR HTS A+V V+PE    I+VDI  EDI+++  R+SG+GGQH+N T SAVR+ H+P
Sbjct: 123 DSAGRRHTSFASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLP 182

Query: 251 TGIMVTS 257
           TGI+ +S
Sbjct: 183 TGIVTSS 189


>gi|159900504|ref|YP_001546751.1| ATPase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893543|gb|ABX06623.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1027

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 119/349 (34%), Gaps = 21/349 (6%)

Query: 3    FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +    + + + R  E+   MS     D + +       +S +  ++   D  ++   D 
Sbjct: 693  LIKQLNVVEARERQTELMDEMSSPSFWDDHEQAQFLLTELSNVARRVGRCDDLRRLYDDA 752

Query: 63   HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
              ++      +E R   ++  +A   E      E+  L    +   D   ILE       
Sbjct: 753  DQLLQRIRERNERRLFPELMRMAKRLERDLRFAELEMLFSNPEDWHDAYIILESDQA--- 809

Query: 123  SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
                 +V +L   Y  ++  ++++ +V+  +  +D     +   ISG G F  ++ E+G 
Sbjct: 810  --GLRWVRNLANAYLEWSLGKRFEAKVIDETPAEDN-LIRVTLQISGSGAFGLLRSEAGT 866

Query: 183  HRVQRVPATEASGRVHTSAA-TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
            HR   +  T    R+ T     + VLP   E        DI +  M  + + G  +    
Sbjct: 867  HR---ISETGGEPRLKTVTQVQITVLPVPTEDTPAPASSDIEMAVMN-TRADGYFLRKLR 922

Query: 242  SAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGD 301
               R  H  +G    +   S+   R   + +L  RL   +                    
Sbjct: 923  VTGRAIHRYSGAAAFACAGSERAVREMLLSILLGRLAMKQLDDFIQPSDDA--------- 973

Query: 302  RSERIRTYNF-SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
                +R+Y+   +  I D R  +     +  L G +D  I   L    A
Sbjct: 974  WGSVVRSYHLGKRSTIKDPRTEIVHTNPKAALAGELDLFIEAALRWRAA 1022


>gi|221133060|ref|XP_002169670.1| PREDICTED: similar to peptide chain release factor, putative,
           partial [Hydra magnipapillata]
          Length = 171

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 2/167 (1%)

Query: 3   FLSHKQICDLKNRFAEIELRMS--ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
                ++  L  R  ++   ++  +      + KL++EY+ ++ I   I+    K+ E+ 
Sbjct: 1   MSFDNKLNRLVERHIDLRDLLATHDMKDAKDFAKLSKEYSDLTDIAEAIADLRNKQAEKN 60

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           DL  ++ D + D+E++ LAQ +   + +E+  +E +I  LLLPKD DD+++ ILE+RAGT
Sbjct: 61  DLAAMLSDSSLDTEMKQLAQSDYDLLLEELPNIEQQIKVLLLPKDADDERNAILEVRAGT 120

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           GG EA LF   LFRMY+RYAA + W+ E+++ SD   G  KE  A+I
Sbjct: 121 GGEEAGLFAAVLFRMYQRYAANKGWRFEIIAMSDTGLGAIKEASASI 167


>gi|169838354|ref|ZP_02871542.1| protease Do [candidate division TM7 single-cell isolate TM7a]
          Length = 351

 Score = 99.5 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 52/86 (60%)

Query: 272 VLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYV 331
           ++ +RL   + ++   + +A R+  IGSGDRSE+IRTYNF Q RITDHRI+ +   +   
Sbjct: 266 IITSRLLQSKIEKEQAKLTAERRSLIGSGDRSEKIRTYNFPQDRITDHRISYSRSGIPQA 325

Query: 332 LQGYIDDIINPLLTAHQAKMIGSASE 357
           + G I+D+   L +  +  +  + ++
Sbjct: 326 MDGNINDLTEHLQSYERELLAKNIND 351


>gi|68072219|ref|XP_678023.1| peptide chain release factor [Plasmodium berghei strain ANKA]
 gi|56498354|emb|CAH99275.1| peptide chain release factor, putative [Plasmodium berghei]
          Length = 329

 Score = 99.1 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 80/306 (26%), Positives = 125/306 (40%), Gaps = 39/306 (12%)

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
            ++   +       +   L + I             SC L + +GTGG+EA  F   L+ 
Sbjct: 26  YKNAFFLCKGVKNVKKSYLSSYIRKDAENYSKYFKNSCSLILSSGTGGTEACDFCNMLYN 85

Query: 135 MYERY----AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           MY +Y       +  K EV+  S N+  G K++   + G   F  +  E G+HR+ R   
Sbjct: 86  MYMKYLGKIKNKKYIKYEVIDISKNEI-GIKKVEIKVDGEYSFYNLISEKGIHRLVRNSP 144

Query: 191 TEASGRVHTSAATVAVLP----------------------------EAAEIDVDIPLEDI 222
             +  +  TS   V V+P                                 ++ +   D+
Sbjct: 145 FNSQNKKMTSFVKVDVIPSLSYNDTNIVNFLNINENDNISLKKNNNMRNMNEMLVNKSDL 204

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
            I TMR+ G GGQ+VN  ++AVRI H PT I V  SSE+SQ  N+  A+K++   LY   
Sbjct: 205 VIQTMRSGGKGGQNVNKVETAVRIIHKPTNISVKVSSERSQILNKRIALKMIEKLLYLQI 264

Query: 282 RKRMANERSANRKLQIGSGDRSERIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDDI 339
                 +   + K     G   E+IR Y  +    I D R N+   +++ +L QG ID  
Sbjct: 265 EALKNVKYELSNKSLTHFG---EQIRNYILYGNKMIKDTRTNVFSTEIDKILSQGEIDIF 321

Query: 340 INPLLT 345
           +     
Sbjct: 322 VEAYQK 327


>gi|163803524|ref|ZP_02197393.1| protein chain release factor B [Vibrio sp. AND4]
 gi|159172659|gb|EDP57512.1| protein chain release factor B [Vibrio sp. AND4]
          Length = 103

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDR 302
           +TH+PT  +V   +++SQH+N+ +AMK LRA+L+++E ++   E+ AN   K  IG G  
Sbjct: 1   MTHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG-- 58

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +IR+Y     RI D R  +     + VL G +D  I   L 
Sbjct: 59  -SQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 100


>gi|270659693|ref|ZP_06222357.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
 gi|270316971|gb|EFA28651.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
          Length = 170

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 80/165 (48%), Positives = 119/165 (72%), Gaps = 4/165 (2%)

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
           Q  ++   ++     D E++++AQ+E+   + EI E+E ++  LLLPKD +D+ +C LEI
Sbjct: 2   QNIEEAEILL----DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEI 57

Query: 117 RAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRM 176
           RAGTGG EA +F GDLFRMY RYA  ++W+VE+LS+++++ GGYKE++  ++G GV+ ++
Sbjct: 58  RAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQL 117

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED 221
           KFESG HRVQRVP TE+ GR+HTSA TVAV+PE A   ++     
Sbjct: 118 KFESGGHRVQRVPKTESQGRIHTSACTVAVMPEFAISLLNANNNT 162


>gi|62719461|gb|AAX93331.1| peptide chain release factor 2 [Lactobacillus sanfranciscensis]
          Length = 156

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 93/146 (63%), Gaps = 8/146 (5%)

Query: 185 VQRVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           + R+   +++GR HTS A+V V+PE     + DI  +D+RID  R+SG+GGQH+N T SA
Sbjct: 14  LVRLSPFDSAGRRHTSLASVNVMPELDENANGDINPDDLRIDVFRSSGAGGQHINKTSSA 73

Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ--IGSG 300
           VRITH+PTGI+  + +++SQ QNR+ AM +L+++LY++E ++ A E++     Q  IG G
Sbjct: 74  VRITHLPTGIVTSSQAQRSQLQNRVTAMNMLKSKLYELEEEKKAEEKAKIEGKQLEIGWG 133

Query: 301 DRSERIRTYNFSQG-RITDHRINLTL 325
               +IR+Y F     + DH      
Sbjct: 134 ---SQIRSYVFHPYTMVKDHGTGHET 156


>gi|82540115|ref|XP_724399.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479026|gb|EAA15964.1| Peptidyl-tRNA hydrolase domain, putative [Plasmodium yoelii yoelii]
          Length = 330

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 40/307 (13%)

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
            ++   +       +   L + I             SC L + +GTGG+EA  F   L+ 
Sbjct: 26  YKNAFFLCKGVKNVKKNYLSSYIRKDAENYSKYFKNSCSLILSSGTGGTEACDFCNMLYN 85

Query: 135 MYERY----AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           MY +Y       +  K EV+  S N+  G K++   + G   F  +  E G+HR+ R   
Sbjct: 86  MYMKYLGKIKNKKNIKYEVIDISKNEI-GIKKVEIKVDGEYSFYNLISEKGIHRLVRNSP 144

Query: 191 TEASGRVHTSAATVAVLP----------------------------EAAEIDVDIPLEDI 222
             +  +  TS   V V+P                                 ++ +   D+
Sbjct: 145 FNSQNKKMTSFVKVDVIPSLSYNDTNIVNFLNINENDNISLKKNNNMRNMNEMLVNKSDL 204

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
            I TMR+ G GGQ+VN  ++AVRI H PT I V  SSE+SQ  N+  A+K++  +L  ++
Sbjct: 205 VIQTMRSGGKGGQNVNKVETAVRIIHKPTNISVKVSSERSQILNKRIALKMIYEKLLYLQ 264

Query: 282 RKRMANERSANR-KLQIGSGDRSERIRTYN-FSQGRITDHRINLTLYKLEYVL-QGYIDD 338
            + + N +     K     G   E+IR Y  +    I D R N+   +++ +L QG ID 
Sbjct: 265 IEALKNVKYELSNKSLTHFG---EQIRNYILYGNKMIKDTRTNVFSTEIDKILSQGEIDI 321

Query: 339 IINPLLT 345
            +     
Sbjct: 322 FVEAYQK 328


>gi|281414235|ref|ZP_06245977.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665]
          Length = 129

 Score = 96.8 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           +SG   Q V    SAVR+TH+PTGI+V+  +EKSQ QNR  A++VL++RL  +       
Sbjct: 1   SSGPASQSVGAPHSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLR----KA 56

Query: 288 ERSANRKLQIGS--GDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
           E  A +K   G       +++R+Y  +  + + D R          V  G+IDD ++  +
Sbjct: 57  EEDAKKKEMAGDVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGI 116

Query: 345 TAHQAKMIGSASE 357
              +A+ + +A E
Sbjct: 117 RW-RAEQVKAAQE 128


>gi|167948500|ref|ZP_02535574.1| peptide chain release factor 2 (programmed frameshift) [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 105

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 6/104 (5%)

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGD 301
           RITH PTGI+V   +++SQH+N+ +AMK L+A+LY++E ++    +    + K  IG   
Sbjct: 2   RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELEIQKQRETQQAVEDTKSDIGW-- 59

Query: 302 RSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
              +IR+Y     RI D R N+     + VL G +D  I   L 
Sbjct: 60  -DSQIRSYVLDASRIKDLRTNVETGNTQAVLDGGLDIFIEASLK 102


>gi|68076525|ref|XP_680182.1| peptide chain release factor 1 [Plasmodium berghei strain ANKA]
 gi|56501082|emb|CAH94168.1| peptide chain release factor 1, putative [Plasmodium berghei]
          Length = 252

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 80/248 (32%), Positives = 123/248 (49%), Gaps = 8/248 (3%)

Query: 97  INYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDND 156
                      +     +E R G GG EA L+  +L ++Y+ YA  +K KV+ +    N 
Sbjct: 1   NKNNENVFLNKNKNHIRIEFRPGIGGDEAELWSKELKKIYQSYANKKKLKVKSVKDITNS 60

Query: 157 DGGYKEIVATIS------GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA 210
                     I+         ++   K ESG H+V+R+P  E   ++ +S AT+A+  + 
Sbjct: 61  LIIKSPNDVKINKDGKEIQISLYDLFKNESGTHQVKRIPKNENKEKIQSSTATIAIFIQN 120

Query: 211 AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTS-SEKSQHQNRLRA 269
                +I L+D++I T R+S  GGQ+VN  +SAVRI H  TGI   S  E++Q  N+  A
Sbjct: 121 YINKYEINLKDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESHEERTQELNKKIA 180

Query: 270 MKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLE 329
           MK L  +++D++ +         R       +RS RIRTYNF  G ITDH +N   Y L 
Sbjct: 181 MKRLTQKIHDLQNREKEEFLQNERIKFTKDCNRSNRIRTYNFFTGYITDH-VNNRKYDLM 239

Query: 330 YVLQGYID 337
           Y  +G ++
Sbjct: 240 YFEKGKLE 247


>gi|213583753|ref|ZP_03365579.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 166

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 63/163 (38%), Positives = 103/163 (63%), Gaps = 7/163 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG E
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           AALF GDLFRMY RYA  R+W+VE++S S+ + GGYKEI+A I
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166


>gi|291533125|emb|CBL06238.1| Protein chain release factor B [Megamonas hypermegale ART12/1]
          Length = 182

 Score = 93.7 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 2/161 (1%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY R+A    + VE       D+ G K +   I G   +  +K E GVHR+ R+   +A+
Sbjct: 1   MYGRWAERNGFSVETADLLPGDEAGVKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDAN 60

Query: 195 GRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
            R HTS +   V+PE  +  +VDI + D+R+DT RASG+GGQH+N TDSAVR+THIPTG+
Sbjct: 61  SRRHTSFSACDVMPEIDDDVEVDINMADVRVDTYRASGAGGQHINKTDSAVRMTHIPTGV 120

Query: 254 MV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
           +    SE+SQ QNR + +++LRARL+++E ++        +
Sbjct: 121 VAQCQSERSQLQNREQCLRLLRARLFELEMEKKEKNLQHLK 161


>gi|226294428|gb|EEH49848.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18]
          Length = 315

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 11/208 (5%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            + +  A +  +++ES +     K  +    ++   + +  +D+  +   +L+ ++ D +
Sbjct: 112 SIADEHASLTSKLAESFNP----KTAKRVGELATTATALKEWDKAHESISELNALLEDSS 167

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +DSE+R LA  ++      +  L   +   L+P+    D  C+LE+R G GG EA +F  
Sbjct: 168 TDSELRSLALEDLQTTMASLSVLSENLKQALIPRHPFADLPCLLELRPGAGGDEAGIFAN 227

Query: 131 DLFRMYERYAALRKWKVEVL---SSSDNDDGGYKEI----VATISGRGVFSRMKFESGVH 183
           +L RMY  + A R  +  +L   S +    GG ++     V  I   G +  ++ E+GVH
Sbjct: 228 ELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVMEIETPGSYETLRTEAGVH 287

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAA 211
           RVQRVPATE+ GR HTSA +VA+LP   
Sbjct: 288 RVQRVPATESKGRTHTSAGSVAILPSFP 315


>gi|209526204|ref|ZP_03274734.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
 gi|209493301|gb|EDZ93626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
          Length = 98

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
             RA+++LRA+LYD++ +    + ++ R+ Q+G+G RSE+IRTYN+   RITDHR+    
Sbjct: 5   LERAIQILRAKLYDIKLQERQEKVTSLRRSQVGTGARSEKIRTYNYKDNRITDHRLGQNF 64

Query: 326 YKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
             L  +L G ID ++   ++  Q + +   +
Sbjct: 65  T-LANILDGDIDQVMEACISQDQQERLEQLA 94


>gi|194699680|gb|ACF83924.1| unknown [Zea mays]
          Length = 174

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 2/163 (1%)

Query: 99  YLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
              L     D +  ++ I AG GG++A  +   L RMY R+   +++K  V+  S  ++ 
Sbjct: 1   MTQLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEA 60

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP--EAAEIDVD 216
           G K     + GR  +  +  E G HR+ R     A G   TS A V V+P      + VD
Sbjct: 61  GIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVD 120

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSE 259
           IP ED+ I   RA G GGQ+VN  ++AVR+ HIPTGI V  S 
Sbjct: 121 IPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCSG 163


>gi|56203457|emb|CAI18896.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 164

 Score = 91.8 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 74/140 (52%), Positives = 93/140 (66%), Gaps = 1/140 (0%)

Query: 143 RKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAA 202
                +  S S    GG +   A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  
Sbjct: 24  NGRNNKNNSISLYFQGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTM 83

Query: 203 TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKS 261
           TVA+LP+  EI++ I  +D+RIDT RASG+GGQHVNTTDSAVRI H+PTG++     E+S
Sbjct: 84  TVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERS 143

Query: 262 QHQNRLRAMKVLRARLYDVE 281
           Q +N+  AM  LRA+LY + 
Sbjct: 144 QLKNKELAMTKLRAKLYSMH 163


>gi|145627801|ref|ZP_01783602.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
 gi|144979576|gb|EDJ89235.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
          Length = 174

 Score = 91.4 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 8/160 (5%)

Query: 10  CDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
                R  E+   + +       D    L +E  ++  +++ I   +Q  ++   L  + 
Sbjct: 17  DAKVERLEEVNAELEQPDVWNAPDKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELA 76

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            +   +    +       A   E+ +   ++ +  +     D   C ++++AG+GG+EA 
Sbjct: 77  IEAEDEDTFNEAV-----AELDELEQQLEKLEFRRMFGGEHDACDCYVDLQAGSGGTEAQ 131

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
            +   L RMY R+A  + +K E++  SD D  G K     
Sbjct: 132 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIK 171


>gi|70936414|ref|XP_739155.1| peptide release factor [Plasmodium chabaudi chabaudi]
 gi|56515938|emb|CAH84701.1| peptide release factor, putative [Plasmodium chabaudi chabaudi]
          Length = 210

 Score = 91.4 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 8/181 (4%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAA-----EID 214
            K I+A I G GV+     E G+HRVQR+P    S ++ TS + V +  E       E  
Sbjct: 1   SKNIIAHIKGEGVYVDFIQEIGIHRVQRIPI--NSKKMQTSTSIVLLFDEKQTKEKLEKK 58

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVL 273
           + IP  D  I+T R+ G+GGQ VN  ++ V+ITH PT I V      SQ QN+  AM ++
Sbjct: 59  MKIPKNDFIIETKRSGGAGGQSVNKNETCVKITHKPTNIFVEVQKTSSQIQNKSIAMDMI 118

Query: 274 RARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           + +LY+   ++       ++K Q  +GDRSE+IRTYNFS   + DH  N+    ++   +
Sbjct: 119 KNKLYNFYYEQEKMNFLKDKKNQKQNGDRSEKIRTYNFSHNTVIDHIANVQYTGIDQFFK 178

Query: 334 G 334
           G
Sbjct: 179 G 179


>gi|289678407|ref|ZP_06499297.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 145

 Score = 90.6 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/147 (33%), Positives = 84/147 (57%), Gaps = 5/147 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L +RF E+   + ++  +     +   + EYA + P+++  +   + + 
Sbjct: 1   MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQG 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + +    ++ D  SD ++R++A  EV    +++ ELE ++  +LLPKD +D ++  LEIR
Sbjct: 61  DLEGAQALLKD--SDPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIR 118

Query: 118 AGTGGSEAALFVGDLFRMYERYAALRK 144
           AGTGG EAA+F GDLFRMY RYA  R 
Sbjct: 119 AGTGGDEAAIFSGDLFRMYSRYAERRG 145


>gi|213583820|ref|ZP_03365646.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 95

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 5/96 (5%)

Query: 253 IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYN 310
           +    +++SQH+N+ +AMK ++A+LY++E ++   E+ A    K  IG G    +IR+Y 
Sbjct: 1   MTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG---SQIRSYV 57

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               RI D R  +     + VL G +D  I   L A
Sbjct: 58  LDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 93


>gi|149003371|ref|ZP_01828260.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
 gi|147758554|gb|EDK65552.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
          Length = 165

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 20  ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLA 79
           E +M+E    +  I   +    ++ + +  + + + ++ + ++  ++     D  + D  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
             +      E+ ++       LL  +  D  + ILEI  G+GG+EA  +   L RMY RY
Sbjct: 62  VAQ----LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRY 117

Query: 140 AALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
              + +KVEVL     D+ G K +  +  G   +  +K E GVHR+ 
Sbjct: 118 GNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLV 164


>gi|313226924|emb|CBY22069.1| unnamed protein product [Oikopleura dioica]
          Length = 394

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 9/308 (2%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            + ++   + +      +L   +    SD+E++DL Q E+   E+ I E+E E+  +L  
Sbjct: 55  DLKTEAKNHTESLVYLNELSENVA-KESDAEMKDLLQEEIKEAEERIGEIEEEVFDVLAE 113

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +T++ +     + AG GG EA +F  +L   Y  +     W  E ++  D ++G   E 
Sbjct: 114 YETEEAEKANFVVEAGAGGDEAGIFARELLDHYLLFFEFMNWDYEQVNR-DEENGMLTEG 172

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
              +SG   F+R   E+GVHRV R+P  + + ++HTS   V V P      +DIP +++ 
Sbjct: 173 HIVVSGLNAFNRNLAEAGVHRVARIP--QNATKLHTSTCAVKVTPILERRLIDIPEKELD 230

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT----SSEKSQHQNRLRAMKVLRARLYD 279
           I + R SG GGQ +NT  +   + HIP+GI  T        +   N  +A + LR+ L  
Sbjct: 231 ISSCRGSGKGGQKINTVHARAVVKHIPSGITTTYFEPGRNNTLAANIEKAKEELRSILQA 290

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDI 339
            +      E    +     + +R ERIR Y++S   +TD+R     + L+    G   ++
Sbjct: 291 RQDAEFEREFLGFKNSMNTNFERGERIRNYSWSNNIVTDYRTKRK-FNLQKYFSGAGFEM 349

Query: 340 INPLLTAH 347
           +  +   +
Sbjct: 350 MEEIQEEY 357


>gi|323355075|gb|EGA86905.1| Mrf1p [Saccharomyces cerevisiae VL3]
          Length = 201

 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 82/189 (43%), Positives = 111/189 (58%), Gaps = 9/189 (4%)

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           SD  +R  A+ E   +  +     + +   LLP     DK  +LE+R G GG EA +F  
Sbjct: 4   SDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGIEAMIFTQ 63

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
           +L  MY  YA  RKWK  ++S ++N+ G G  + + +I   G + R++FE+GVHRVQR+P
Sbjct: 64  NLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRIP 123

Query: 190 ATEASGRVHTSAATVAVLPE--------AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTD 241
           +TE  GR HTS A V VLP+            +      +IR+D MRASG GGQHVNTTD
Sbjct: 124 STETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTTD 183

Query: 242 SAVRITHIP 250
           SAVR+THIP
Sbjct: 184 SAVRLTHIP 192


>gi|313622391|gb|EFR92858.1| peptide chain release factor 2 [Listeria innocua FSL J1-023]
          Length = 55

 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 293 RKLQIGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
            + +IG G    +IR+Y F     + DHR N     ++ V+ G +DD IN  L + 
Sbjct: 1   EQKEIGWG---SQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 53


>gi|156086270|ref|XP_001610544.1| peptide chain release factor 1 [Babesia bovis T2Bo]
 gi|154797797|gb|EDO06976.1| peptide chain release factor 1, putative [Babesia bovis]
          Length = 276

 Score = 87.9 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
            +   ++EIR G GG+EA  +  +L + ++++   +K  V+  +         +      
Sbjct: 17  TNAQVVVEIRPGVGGTEANTWAQELAKAFKKFCQNKKCNVKEENIGSIIILHIQGDDDKF 76

Query: 168 SGRGVFS---RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD-------- 216
              G      R   E+G+H+V+RVP +E +GR+H+S ATVAVLP                
Sbjct: 77  RENGCTGLEERFLREAGIHQVKRVPTSEKAGRMHSSTATVAVLPTELTKAKYEDILAKIV 136

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           I   DI   T R+SG+GGQ+VN  ++A  +TH PTGI + +  E++Q +N+  A++ L+ 
Sbjct: 137 IDPRDIEWKTCRSSGAGGQNVNKVETAAALTHKPTGIRIESQEERTQSKNKEIALEKLKI 196

Query: 276 RLYDVERKRMANERSANRKLQIGSGD------------RSERIRTYNFSQGRITDHRINL 323
           +L       + ++    RK Q+ + +            RSER++TY F+  +I + R   
Sbjct: 197 QLAKDIESDVRHDAQNRRKEQVKAIEMNYICTQIKGSKRSERLKTYFFNTHQIINDRCGC 256

Query: 324 TLYKLEYVLQGYIDDI 339
             Y L   L+  ++ +
Sbjct: 257 K-YNLNDFLKFKLEKV 271


>gi|30694592|ref|NP_191278.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|332646104|gb|AEE79625.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 406

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 138/351 (39%), Gaps = 15/351 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   +   + ++ + E  M      D   K  E    ++     +      K + ++ 
Sbjct: 63  MFAPDALELEEEQWIKQEETMRYFDLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEA 122

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I     D+    L +    +     R L +      L +D  D +   + I++G+ G
Sbjct: 123 KLIIQLGEMDAIDYSLFEQAYDSSLDVSRSL-HHYEMSKLLRDQYDAEGACMIIKSGSPG 181

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSD--NDDGGYKEIVATISGRGVFSRMKFES 180
           +++ ++   +  MY ++A        V       ++  G             +  +  E 
Sbjct: 182 AKSQIWTEQVVSMYIKWAERLGQNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGER 241

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHR+  + +T         +ATV ++P       D  +++  +     S    +     
Sbjct: 242 GVHRLI-ISSTSN----EECSATVDIIPLFLRASPDFEVKEGDLIV---SYPAKEDHKIA 293

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++ V I HIP+G+ + +S E+++  NR++A+  L+A+L  + +++  ++ +      I  
Sbjct: 294 ENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKLLVIAKEQKVSDVNKIDSKNI-- 351

Query: 300 GDRSERIRTYNFS-QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +  E  R+Y       + D +  L +  L+ VL G I  ++   ++  ++
Sbjct: 352 LEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLLGAHISMRRS 402


>gi|315283645|ref|ZP_07871778.1| peptide chain release factor 2 [Listeria marthii FSL S4-120]
 gi|313612712|gb|EFR86721.1| peptide chain release factor 2 [Listeria marthii FSL S4-120]
          Length = 70

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 281 ERKRMANERSANRKLQ--IGSGDRSERIRTYNFSQG-RITDHRINLTLYKLEYVLQGYID 337
           E++    E +  R  Q  IG G    +IR+Y F     + DHR +     ++ V+ G +D
Sbjct: 2   EQEEKERELAEIRGEQKEIGWG---SQIRSYVFHPYSMVKDHRTSYETGNIQAVMDGDLD 58

Query: 338 DIINPLLTAH 347
           D IN  L + 
Sbjct: 59  DFINAYLRSR 68


>gi|297817036|ref|XP_002876401.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322239|gb|EFH52660.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 409

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 133/353 (37%), Gaps = 16/353 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   +   + ++ + E  M      D   K  E    ++     +      K + ++ 
Sbjct: 63  MFAPDALELEEEQWIKQEETMRYYDLWDDPAKSDEILLKLADRAKTVDSLKDLKYKAEEA 122

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG- 121
             +I     D+    L +    +     R L +     LL    D + +C++        
Sbjct: 123 KLIIQLGEMDAIDYSLFEQAYDSSLDVSRSLHHYEMSKLLTDQYDAEGACMIIKSGSQDA 182

Query: 122 -GSEAALFVGDLFRMYERYAALRKWKVEVLSSSDN--DDGGYKEIVATISGRGVFSRMKF 178
              +  ++   +  MY ++A        V        +  G             +  +  
Sbjct: 183 KSQDLQIWTEQVVSMYIKWAEKLGQNARVAEKCSFLSNKSGVNSATIEFEFDFAYGYLLG 242

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E GVHR+  + +T +       +ATV ++P       D    +++ D +  S    ++  
Sbjct: 243 ERGVHRLI-ISSTSS----EECSATVDIIPLFLRASPDF---EVKEDDLIVSYPAKENHK 294

Query: 239 TTDSAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
             ++ V I HIP+GI V SS E+++  NR++A+  L+A+L  + +++  ++ +      I
Sbjct: 295 IAENMVSIQHIPSGITVESSGERNRFANRIKALNRLKAKLLVIAKEQKISDVNKINSKNI 354

Query: 298 GSGDRSERIRTYNFS-QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
                 E  R Y    Q  + D +  L +  L+ VL G I  ++   ++  ++
Sbjct: 355 --LKPWEETRRYVSKGQKMVVDTKTGLEILDLKSVLDGNIGPLLGAHISMRRS 405


>gi|22135990|gb|AAM91577.1| putative protein [Arabidopsis thaliana]
 gi|30725574|gb|AAP37809.1| At3g57190 [Arabidopsis thaliana]
          Length = 372

 Score = 86.0 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 138/351 (39%), Gaps = 15/351 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   +   + ++ + E  M      D   K  E    ++     +      K + ++ 
Sbjct: 29  MFAPDALELEEEQWIKQEETMRYFDLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEA 88

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +I     D+    L +    +     R L +      L +D  D +   + I++G+ G
Sbjct: 89  KLIIQLGEMDAIDYSLFEQAYDSSLDVSRSL-HHYEMSKLLRDQYDAEGACMIIKSGSPG 147

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSD--NDDGGYKEIVATISGRGVFSRMKFES 180
           +++ ++   +  MY ++A        V       ++  G             +  +  E 
Sbjct: 148 AKSQIWTEQVVSMYIKWAERLGQNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGER 207

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           GVHR+  + +T         +ATV ++P       D  +++  +     S    +     
Sbjct: 208 GVHRLI-ISSTSN----EECSATVDIIPLFLRASPDFEVKEGDLIV---SYPAKEDHKIA 259

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++ V I HIP+G+ + +S E+++  NR++A+  L+A+L  + +++  ++ +      I  
Sbjct: 260 ENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKLLVIAKEQKVSDVNKIDSKNI-- 317

Query: 300 GDRSERIRTYNFS-QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
            +  E  R+Y       + D +  L +  L+ VL G I  ++   ++  ++
Sbjct: 318 LEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLLGAHISMRRS 368


>gi|6735298|emb|CAB68125.1| putative protein [Arabidopsis thaliana]
          Length = 409

 Score = 85.2 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 133/353 (37%), Gaps = 16/353 (4%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
             +   +   + ++ + E  M      D   K  E    ++     +      K + ++ 
Sbjct: 63  MFAPDALELEEEQWIKQEETMRYFDLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEA 122

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG- 121
             +I     D+    L +    +     R L +     LL    D + +C++      G 
Sbjct: 123 KLIIQLGEMDAIDYSLFEQAYDSSLDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGA 182

Query: 122 -GSEAALFVGDLFRMYERYAALRKWKVEVLSSSD--NDDGGYKEIVATISGRGVFSRMKF 178
              +  ++   +  MY ++A        V       ++  G             +  +  
Sbjct: 183 KSQDLQIWTEQVVSMYIKWAERLGQNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLG 242

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
           E GVHR+  + +T         +ATV ++P       D  +++  +     S    +   
Sbjct: 243 ERGVHRLI-ISSTSN----EECSATVDIIPLFLRASPDFEVKEGDLIV---SYPAKEDHK 294

Query: 239 TTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
             ++ V I HIP+G+ + +S E+++  NR++A+  L+A+L  + +++  ++ +      I
Sbjct: 295 IAENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKLLVIAKEQKVSDVNKIDSKNI 354

Query: 298 GSGDRSERIRTYNFS-QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQA 349
              +  E  R+Y       + D +  L +  L+ VL G I  ++   ++  ++
Sbjct: 355 --LEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLLGAHISMRRS 405


>gi|332213671|ref|XP_003255948.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 4 [Nomascus leucogenys]
          Length = 235

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 38/209 (18%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG G                                    GG +  
Sbjct: 121 SEETDENDLILEVTAGVG------------------------------------GGLRHA 144

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GR+HTS  TVA+LP+  EI++ I  +D+R
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 204

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PT 
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTD 233


>gi|46190861|ref|ZP_00121023.2| COG1186: Protein chain release factor B [Bifidobacterium longum
           DJO10A]
          Length = 115

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 4/115 (3%)

Query: 245 RITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           RITH+PTGI+V    E+SQ QNR  AM VL++RL  +  +  A ++         S    
Sbjct: 2   RITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAGDIKAS--WG 59

Query: 304 ERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +++R+Y     + + D R      + + V  G I+  I   +     +   + +E
Sbjct: 60  DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWRHEQRRAAETE 114


>gi|253730877|ref|ZP_04865042.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725386|gb|EES94115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 59

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 288 ERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +     K  IG G+   +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 2   KAMEGNKSDIGWGN---QIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 57


>gi|77415494|gb|AAI05974.1| MTRF1L protein [Homo sapiens]
          Length = 235

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 86/209 (41%), Positives = 120/209 (57%), Gaps = 38/209 (18%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG G                                    GG +  
Sbjct: 121 SEETDENDLILEVTAGVG------------------------------------GGLRHA 144

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 204

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PT 
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTD 233


>gi|114609873|ref|XP_001140447.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 1 [Pan troglodytes]
          Length = 235

 Score = 83.3 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 86/209 (41%), Positives = 120/209 (57%), Gaps = 38/209 (18%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K+QE ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG G                                    GG +  
Sbjct: 121 SEETDENDLILEVTAGVG------------------------------------GGLRHA 144

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 204

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PT 
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTD 233


>gi|226294427|gb|EEH49847.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18]
          Length = 153

 Score = 82.9 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 4/103 (3%)

Query: 236 HVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
           HVN T+SA+R+THIPTGI+V     +SQH+NR +A ++LRAR+    R+    E    R+
Sbjct: 9   HVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRR 68

Query: 295 LQ---IGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
                +G   R ++IRTYNF Q R TDHR  LTL+ L  +++G
Sbjct: 69  GAMGGVGKMGRGDKIRTYNFGQNRCTDHRSGLTLHNLVNIMEG 111


>gi|56203460|emb|CAI18899.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 235

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 38/209 (18%)

Query: 44  PIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLP 103
            +++ I + ++K++E ++   ++ D N D  +R LA+ E+   +KEI +L+++I  LL+P
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDENED--LRKLAENEITLCQKEITQLKHQIILLLVP 120

Query: 104 KDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI 163
            +  D+   ILE+ AG G                                    GG +  
Sbjct: 121 SEETDENDLILEVTAGVG------------------------------------GGLRHA 144

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
            A+I G   +  MKFE GVHRVQRVP TE  GRVHTS  TVA+LP+  EI++ I  +D+R
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 204

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTG 252
           IDT RASG+GGQHVNTTDSAVRI H+PT 
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTD 233


>gi|146340|gb|AAA23958.1| peptide-chain-release factor 2 [Escherichia coli]
          Length = 72

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 276 RLYDVERKRMANERS--ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQ 333
           +LY++E ++   E+    + K  IG G    +IR+Y     RI D R  +     + VL 
Sbjct: 1   KLYELEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLD 57

Query: 334 GYIDDIINPLLTA 346
           G +D  I   L A
Sbjct: 58  GSLDQFIEASLKA 70


>gi|213855686|ref|ZP_03383926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 78

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 270 MKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHRINLTLYK 327
           MK ++A+LY++E ++   E+ A    K  IG G    +IR+Y     RI D R  +    
Sbjct: 1   MKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRN 57

Query: 328 LEYVLQGYIDDIINPLLTA 346
            + VL G +D  I   L A
Sbjct: 58  TQAVLDGSLDQFIEASLKA 76


>gi|213616409|ref|ZP_03372235.1| hypothetical protein SentesTyp_18844 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 65

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 281 ERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDII 340
           ++K    +   + K  IG G    +IR+Y     RI D R  +     + VL G +D  I
Sbjct: 1   QKKNAEKQAMEDTKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFI 57

Query: 341 NPLLTA 346
              L A
Sbjct: 58  EASLKA 63


>gi|220679233|emb|CAX12804.1| novel protein similar to H.sapiens MTRF1L, mitochondrial
           translational release factor 1-like (MTRF1L) [Danio
           rerio]
          Length = 273

 Score = 81.4 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 66/214 (30%), Positives = 115/214 (53%), Gaps = 14/214 (6%)

Query: 6   HKQICDLKNRFA-EIELRMSESPSVDAYIKLTEE--YAAISPIISKISIYDQKKQEEQDL 62
              +   +  +   +    S++ +++     T+      ++ ++  I   + K++E +D+
Sbjct: 71  QDYLKKKQTEYNTSLNSINSQNQTLEDADMKTQRTNMTILAHLVHNIKKLEVKQKEMEDM 130

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             ++ D  +D E+ +LA+ E  A+  +I++L              D    +LE+ AG GG
Sbjct: 131 QDLLKD--NDPELLELAETEKEAVLADIQDLRQ---------KESDMSELVLEVSAGVGG 179

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGV 182
            EA LF  ++F MY+ YAA   W  +VL ++ ++ GG +   A++SG   + ++KFE+GV
Sbjct: 180 QEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSGPLSYKKLKFEAGV 239

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVD 216
           HRVQRVP TE+ GR HTS  TVA+LP+  EI   
Sbjct: 240 HRVQRVPKTESKGRTHTSTMTVAILPQPTEISFT 273


>gi|195161900|ref|XP_002021796.1| GL26306 [Drosophila persimilis]
 gi|194103596|gb|EDW25639.1| GL26306 [Drosophila persimilis]
          Length = 313

 Score = 81.4 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 7/166 (4%)

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           G          +          +  E            G +H N   +     H      
Sbjct: 140 GGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIGGLRHANVMVNGADAFH-WLRF- 197

Query: 255 VTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQG 314
              +   + Q R  A+K L+ARL   + +     + A +K Q GS +R+E+IRTYNF Q 
Sbjct: 198 --EAGVHRVQTRELALKRLQARLVQQQLESSEASKQATKKAQQGSLNRNEKIRTYNFVQD 255

Query: 315 RITDHRI-NLTLYKLEYVLQGY--IDDIINPLLTAHQAKMIGSASE 357
           R+TDHRI   TL+ L+  L+G   +  ++  L   H+   +    E
Sbjct: 256 RVTDHRIQGGTLHNLDGFLKGGESLSGLVEKLQLEHRRSRLRDLLE 301



 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)

Query: 38  EYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEI 97
             + +  +++ +      ++       +  + + D   + + +   +  +   ++ +  +
Sbjct: 58  RLSQLEGVVNALEQRRVLERNITSAKDIEQEKDED-MRKLMEEENEVYADLLSKQEQTML 116

Query: 98  NYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
             LL   D +   + I  + AG GG EA LF  +LF MY  Y     W+ E  +    D 
Sbjct: 117 QELLALADDEVYPALIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDI 176

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           GG +     ++G   F  ++FE+GVHRVQ
Sbjct: 177 GGLRHANVMVNGADAFHWLRFEAGVHRVQ 205


>gi|124511698|ref|XP_001348982.1| peptide chain release factor, putative [Plasmodium falciparum 3D7]
 gi|23498750|emb|CAD50820.1| peptide chain release factor, putative [Plasmodium falciparum 3D7]
          Length = 352

 Score = 81.0 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 7/139 (5%)

Query: 211 AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRA 269
              D  I   D+ I TMR+ G GGQ+VN  ++AVRI H PT I V  SSE++Q  N+  A
Sbjct: 215 KMNDFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNA 274

Query: 270 MKVLRARLYDVERKRMANERSA-NRKLQIGSGDRSERIRTYN-FSQGRITDHRINLTLYK 327
           +K +  +L  ++ + + N++     K     G   E+IR Y  +    I D R N+    
Sbjct: 275 LKRIYEKLLYLQTEALKNKKYELANKSLTHFG---EQIRNYVLYGNKMIKDTRTNVFSTD 331

Query: 328 LEYVL-QGYIDDIINPLLT 345
           ++ VL QG ID  I+    
Sbjct: 332 IDKVLYQGEIDIFIDAYQK 350



 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 5/139 (3%)

Query: 85  AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY----ERYA 140
              +    L + +N  +         SC L + +GTGG+EA  F   L+ MY     R  
Sbjct: 25  RNIRNRYNLCSYVNKDVENYSRYFKNSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIK 84

Query: 141 ALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTS 200
             +  K EV+  S N+  G K++   I G   F     E G+HR+ R     A  +  TS
Sbjct: 85  NRKNIKYEVIDISKNEV-GIKKVEIKIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKMTS 143

Query: 201 AATVAVLPEAAEIDVDIPL 219
              V V+P     D+++  
Sbjct: 144 FVKVDVIPTLNFNDLNVIN 162


>gi|302420205|ref|XP_003007933.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102]
 gi|261353584|gb|EEY16012.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102]
          Length = 253

 Score = 81.0 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 97/193 (50%), Gaps = 30/193 (15%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGG----------YKEIVATISGRGVFSRMKFESGVHR 184
           MY++Y A   ++   L     D  G           +E V  I   G +   + E+G+HR
Sbjct: 1   MYKQYCAYMGYRAVALKYEMADGAGSASTSAGEEPLQEAVLEIKDAGAYGLFRGEAGMHR 60

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-------------------VDIPLEDIRID 225
           VQRVP TE SGR HTSA  V VLP   +                       +   ++RI+
Sbjct: 61  VQRVPDTEKSGRTHTSAVAVWVLPSFPDSHEAAGGGGGGDMNVDDPASDFYLDPAELRIE 120

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKR 284
           TMRA G+GGQHVN T+SA+R+TH+PTG +V+    + Q +NR  A K++R+R+  + R+ 
Sbjct: 121 TMRARGAGGQHVNKTESAIRMTHLPTGTVVSMQDSRQQSRNREDAWKLMRSRVALLRREA 180

Query: 285 MANERSANRKLQI 297
              + +  R   +
Sbjct: 181 REEQAARLRDNDV 193


>gi|156305180|ref|XP_001617535.1| hypothetical protein NEMVEDRAFT_v1g157388 [Nematostella vectensis]
 gi|156194391|gb|EDO25435.1| predicted protein [Nematostella vectensis]
          Length = 80

 Score = 80.6 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 268 RAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
             MK LRA+LY++E  +         + K  IG G    +IR+Y     RI D R  +  
Sbjct: 1   TCMKQLRAKLYEMEMMKRNAAAQELEDSKADIGWG---SQIRSYVLDDQRIKDLRTGVQT 57

Query: 326 YKLEYVLQGYIDDIINPLLTA 346
              + VL G +D  I   L A
Sbjct: 58  SNCDRVLDGELDMFIEASLKA 78


>gi|323249067|gb|EGA32987.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 56

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 42/54 (77%)

Query: 304 ERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           +R RTYNF QGR+TDHRINLTLY+L+  ++G +D +I P++  HQA ++ + SE
Sbjct: 1   DRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 54


>gi|218196675|gb|EEC79102.1| hypothetical protein OsI_19734 [Oryza sativa Indica Group]
 gi|222631381|gb|EEE63513.1| hypothetical protein OsJ_18329 [Oryza sativa Japonica Group]
          Length = 214

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 5/215 (2%)

Query: 135 MYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           MY  +A  +  K  ++    +  G        I    +F  +  E G HR+   P+ + +
Sbjct: 1   MYSSWARKQGCKDGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIY-PSVDNA 59

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           G    ++A V ++P   +  V++ L++  ++ +  S S  +  +  +SA+R+ HI TG+ 
Sbjct: 60  GTYEATSARVDIIPLFLDRPVNLHLDENDLE-ISPSPSDHKRRDHRNSAIRVQHIRTGVT 118

Query: 255 VTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF-S 312
             SS E+S   N+++A+  L+A+L  + R+  ++     ++  +     S   R Y F  
Sbjct: 119 AESSGERSYFANKMKAISRLKAKLLVISRELRSSNLKTIKRQTVEE-LYSRETRRYKFGP 177

Query: 313 QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           Q  + D    L L +L  VL G ID  I   + + 
Sbjct: 178 QKLVHDLNTGLQLSELNSVLDGDIDPFIRGRIVSR 212


>gi|291454153|ref|ZP_06593543.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357102|gb|EFE84004.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 223

 Score = 78.7 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 10/136 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A+IE R+++           KL + YA ++PI+     + Q  ++ +   
Sbjct: 3   EAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +E    EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAADDPD-------FAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFVGDLFRMYERY 139
           E+ALF GDL R   R+
Sbjct: 116 ESALFAGDLLRPPRRW 131


>gi|239982309|ref|ZP_04704833.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 241

 Score = 78.7 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 10/136 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A+IE R+++           KL + YA ++PI+     + Q  ++ +   
Sbjct: 21  EAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIETAR 80

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +E    EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 81  ELAADDPD-------FAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 133

Query: 124 EAALFVGDLFRMYERY 139
           E+ALF GDL R   R+
Sbjct: 134 ESALFAGDLLRPPRRW 149


>gi|156084766|ref|XP_001609866.1| peptide chain release factor 2 [Babesia bovis T2Bo]
 gi|154797118|gb|EDO06298.1| peptide chain release factor 2, putative [Babesia bovis]
          Length = 281

 Score = 78.7 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 27/224 (12%)

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYER----YAALRKW------------KVEV 149
             D   C + I AG GG+EA  F   L RMY+R    Y     W                
Sbjct: 39  EYDKNHCKVTITAGVGGTEAFDFCKMLGRMYKRFIQHYCQPESWNRELYGDLPRSLHYVD 98

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP- 208
            +    D  GY+ +   + G   +   K E G HR+ R     A  +  T+ ++V V+P 
Sbjct: 99  GTVVPGDKAGYRILEFEVHGDYAYKLFKGEKGTHRLVRNSPYNAMRKRQTTFSSVQVVPL 158

Query: 209 --------EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSE 259
                   +  E    +  +D+ ++TMR+ G GGQ+VN  ++AVRITH  TG+ V   +E
Sbjct: 159 LSADDRDVQHYESSKHVTEKDVIVETMRSGGKGGQNVNKVETAVRITHKKTGLSVRVQTE 218

Query: 260 KSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRS 303
           +SQ QNR  AM+ +   +    ++++  + +  R  ++   D  
Sbjct: 219 RSQSQNREIAMRRISEMVDAHYKEQLREKCNELRGEEVE-ADWG 261


>gi|23010857|ref|ZP_00051405.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score = 78.7 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/109 (51%), Positives = 77/109 (70%), Gaps = 2/109 (1%)

Query: 182 VHRVQRVPATEASGRVHTSAATVAVLPEAAEI-DVDIPLEDIRIDTMRASGSGGQHVNTT 240
           +HR+ R+   +++ R HTS A+V V P   +  +++I   D RIDT R+SG+GGQHVNTT
Sbjct: 1   MHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKESDCRIDTYRSSGAGGQHVNTT 60

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           DSAVRITH PTGI+V    E+SQH+NR  A  +LRARLY++E K+   +
Sbjct: 61  DSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEK 109


>gi|115634718|ref|XP_787728.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115976393|ref|XP_001185397.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 90

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/83 (38%), Positives = 50/83 (60%)

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
            G+  +  E+SQH+NR  AM +L+  +Y+       +   + R  Q+G+G RSE+IRTYN
Sbjct: 8   NGLAESQQERSQHKNRSIAMTMLQPHIYNRILADQTSSERSMRSSQVGTGGRSEKIRTYN 67

Query: 311 FSQGRITDHRINLTLYKLEYVLQ 333
           + Q RITDHR  LT++ +   + 
Sbjct: 68  YQQDRITDHRRGLTVHGVPSAID 90


>gi|302780523|ref|XP_002972036.1| hypothetical protein SELMODRAFT_412495 [Selaginella moellendorffii]
 gi|300160335|gb|EFJ26953.1| hypothetical protein SELMODRAFT_412495 [Selaginella moellendorffii]
          Length = 402

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 57/104 (54%)

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
               ++  TT   ++ + +P        +    + ++   +   A LY++ER R A  RS
Sbjct: 142 KKYEKYAQTTHGGLKFSALPPPTPEVDVDIRNDEIKIDTYRAGGAMLYELERSRTAASRS 201

Query: 291 ANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG 334
             ++ QIGS DR ERIRT NF Q R+TDHR+ +T + +E +++G
Sbjct: 202 ELQQDQIGSSDRLERIRTCNFPQDRVTDHRVGVTQHSIEQIMEG 245



 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           ++ +  K +  +++R A +   + E+    D  IK+ ++   +   +        K++E 
Sbjct: 16  ILRILEKSVISIEDRHACLSKALLETGIASDELIKMNKDLCKLDYSVDMFKALKAKEKEV 75

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L  ++ +   D E+R LA  E+    +E+R+ ++E+    +PKD  D +        G
Sbjct: 76  IGLKELVKESVEDEEMRRLASGELQTATREVRDAQDEVLLERIPKDEADSR--------G 127

Query: 120 TGGSEAALFVGDLFRMYERYAA 141
            GG EA++F  DLF+ YE+YA 
Sbjct: 128 AGGDEASIFASDLFKKYEKYAQ 149


>gi|222872913|gb|EEF10044.1| predicted protein [Populus trichocarpa]
          Length = 245

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDRSER 305
           +PTGI+V     +SQH NR  A + LR++LY+ E ++   E+    + K  +G G    +
Sbjct: 1   MPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWG---HQ 57

Query: 306 IRTYNFSQGRITDHRINLTLYKLEY 330
           IR+Y     RI D R N+ +   + 
Sbjct: 58  IRSYVLDNSRIKDLRTNVEISATQK 82


>gi|119513510|ref|ZP_01632531.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
 gi|119461826|gb|EAW42842.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
          Length = 66

 Score = 77.5 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 291 ANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
             R   +       +IR Y F   + + D R N+    +  V+ G +D  I   L   
Sbjct: 1   EIRGDMVE-ASWGNQIRNYVFHPYQMVKDLRTNVETTAISDVMDGDLDSFIQAYLRQE 57


>gi|302823050|ref|XP_002993180.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii]
 gi|300139071|gb|EFJ05820.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii]
          Length = 221

 Score = 77.5 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 252 GIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF 311
              V   E+SQ +N+++A+ +L+++L  +  ++ A E    R   +   +  + IR Y F
Sbjct: 12  TFFVFVKERSQLENKIKAIALLKSKLLVILEEQKAAEIKEIR-GDVVKAEWGQEIRNYVF 70

Query: 312 SQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLL 344
              R + D R N+    +  ++ G ++ ++   L
Sbjct: 71  HPYRLVHDLRTNVETSDISGIMDGNVEPLLTAYL 104


>gi|10092253|gb|AAG12666.1|AC027033_1 peptide chain release factor, putative; 62597-62246 [Arabidopsis
           thaliana]
          Length = 88

 Score = 77.5 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 278 YDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYI 336
            ++ R+   N +      +I  G+   +IRTY   Q R + D R N  +   + VL+G +
Sbjct: 17  LEMARQTSVNAQHTRSLTEISWGN---QIRTYVLHQYRMVKDLRTNYEVSDPDSVLEGDL 73

Query: 337 DDIINPLL 344
           D  I+ LL
Sbjct: 74  DGFISKLL 81


>gi|302857242|ref|XP_002959826.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f.
           nagariensis]
 gi|300254224|gb|EFJ39110.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f.
           nagariensis]
          Length = 194

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 66/101 (65%), Positives = 80/101 (79%), Gaps = 1/101 (0%)

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
           V+  +  ESGVHRVQRVP TEA GRVHTS   V VLP+A E+DV +  ED+RI+TMRASG
Sbjct: 94  VYGTLLPESGVHRVQRVPVTEAQGRVHTSTVAVVVLPQADEVDVKLRDEDLRIETMRASG 153

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           +GGQHVN TDSAVRITH+PTG++V   +E+SQH NR  A+K
Sbjct: 154 AGGQHVNVTDSAVRITHVPTGLVVSCQNERSQHLNRAAALK 194


>gi|207109871|ref|ZP_03244033.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 130

 Score = 74.8 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 1/113 (0%)

Query: 128 FVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQR 187
           +   L+RMY R+A  R +K E+L   D ++ G K +   I G   +  +K ESGVHR+ R
Sbjct: 1   WASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVR 60

Query: 188 VPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNT 239
           +   +A+ + HTS A+V + P    +ID++I  +D+R D  RASG+GGQHVN 
Sbjct: 61  ISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNK 113


>gi|325278153|ref|ZP_08143661.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
 gi|324096712|gb|EGB95050.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
          Length = 141

 Score = 73.3 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 5/145 (3%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           ++ ++  +        + QDL  +  + N +  + D+         + + E   ++ +  
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTE-----LEGLEENLAQLEFRR 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +     D  +  L+I+AG+GG+EA  +   L RMY R+A  R +   ++  S+ +  G K
Sbjct: 57  MFSGEMDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIK 116

Query: 162 EIVATISGRGVFSRMKFESGVHRVQ 186
                I G   F  ++ E GVHR+ 
Sbjct: 117 GATVHIKGEYAFGWLRTEIGVHRLV 141


>gi|328852101|gb|EGG01250.1| hypothetical protein MELLADRAFT_92621 [Melampsora larici-populina
           98AG31]
          Length = 174

 Score = 72.9 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 29/190 (15%)

Query: 151 SSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVL--- 207
             S +   G +E    I G  V+ RM++E+GVH VQ VP  + +  VHTS A V VL   
Sbjct: 1   MVSGHSMDGLREAPLEIKGEDVYKRMRWEAGVHCVQCVPVMQNTSLVHTSTAAVIVLAFD 60

Query: 208 --PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQN 265
              +  + +     +D+R +TMR+ G GGQHVN T+S VR+TH+P               
Sbjct: 61  PGNQDRQEEALFEDKDVRTETMRSQGVGGQHVNKTESVVRLTHVPNWN------------ 108

Query: 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325
             R   +LRA L D+  ++   E    R LQ+        I    F QGR+TDHRI LTL
Sbjct: 109 -SRVFMILRAILSDLRNQQKQVEERGLRLLQL--------I--CVF-QGRVTDHRIGLTL 156

Query: 326 YKLEYVLQGY 335
            +L YV++G 
Sbjct: 157 PRLHYVMEGD 166


>gi|71032615|ref|XP_765949.1| peptide chain release factor 1 [Theileria parva strain Muguga]
 gi|68352906|gb|EAN33666.1| peptide chain release factor 1, putative [Theileria parva]
          Length = 216

 Score = 72.9 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 13/136 (9%)

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDV------------DIPLEDI 222
           R   E GVH+V+RVP TE SGR+H+S ATVAVLP                   +I   DI
Sbjct: 45  RFLREGGVHQVKRVPMTEKSGRMHSSTATVAVLPSEMAKGRGTNNFEDVLEAVEINPSDI 104

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
              T RASG GGQ+VN  ++AV + H PTGI V  S E+SQ +N+  A+K LR  +  + 
Sbjct: 105 EWKTCRASGPGGQNVNKVETAVSLYHKPTGIKVECSEERSQGKNKELALKKLREEIARIR 164

Query: 282 RKRMANERSANRKLQI 297
            + M +E    RK Q+
Sbjct: 165 IEEMFSEARVRRKSQV 180


>gi|167948499|ref|ZP_02535573.1| hypothetical protein Epers_18991 [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589280|gb|ABG77149.1| hypothetical protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 153

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 59/127 (46%)

Query: 90  IRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEV 149
             +   E+ +  +     D  +  L+I+AG+GG+EA  +   L RMY R+     +K E+
Sbjct: 2   FEQRIAELEFRRMFSGEMDPSNAFLDIQAGSGGTEAQDWAEMLLRMYLRWGEAHGFKTEL 61

Query: 150 LSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPE 209
           + +S  +  G K       G   F  ++ E+GVHR+ R    ++  R HTS +    L  
Sbjct: 62  MEASPGEVAGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSASVCLAG 121

Query: 210 AAEIDVD 216
              +D D
Sbjct: 122 NRRLDRD 128


>gi|261885046|ref|ZP_06009085.1| peptide chain release factor 2 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 83

 Score = 70.6 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 270 MKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN-FSQGRITDHRINLTLYKL 328
           MK L++RLY+ E  +     +A  K +IG G    +IR+Y  F   ++ D R      + 
Sbjct: 1   MKWLKSRLYEFELMKQQEANNAIEKSEIGWG---HQIRSYVLFPYQQVKDTRSGEAYSQT 57

Query: 329 EYVLQGYIDDIINPLLTAHQAKMIGS 354
           + +L G I  II  +L + ++     
Sbjct: 58  DAILDGDIKKIIESVLISQKSSANKE 83


>gi|12329992|emb|CAC24560.1| mitochondrial peptide chain release factor [Platichthys flesus]
          Length = 183

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 9/183 (4%)

Query: 57  QEEQDLHTVIG----DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           ++ +++ +++       + D ++  + + E   I  +I  L  ++   L+P D  D  + 
Sbjct: 1   RDLEEVRSLLQGSAGAKDEDEQVMQMLKEEEEHISSKILALREDLIKALVPADPLDSSND 60

Query: 113 ILEIRAG--TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
           +LE+ +G  TGG     F  ++F MY+ +A  + W  EV + +  D GG       I+G 
Sbjct: 61  LLEVVSGRTTGGDICQQFTKEMFDMYQGFAFYKNWDFEVYNYTSADFGGLHHAAVRIAGD 120

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRV---HTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            V+  +K E G HRVQR+P    S R+   HT   TV +LP+  E DV I  +D+RIDT 
Sbjct: 121 NVYRHLKHEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIILPQPVEFDVHIDPKDLRIDTF 180

Query: 228 RAS 230
           RA 
Sbjct: 181 RAR 183


>gi|15896625|ref|NP_349974.1| protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|15026468|gb|AAK81314.1|AE007835_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|325510788|gb|ADZ22424.1| Protein chain release factor B [Clostridium acetobutylicum EA 2018]
          Length = 204

 Score = 69.8 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGRGV 172
           L+I AGTG  E+  FV     + ++    R  K+EVL     +  G  K +   +SG G 
Sbjct: 3   LQISAGTGPVESCRFVYLFLNLVKKECKYRNIKIEVLDFVPGEKIGTLKSVFLKLSGEGA 62

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGS 232
            +     +G H +        + R       +AV   + E + D+  +DI I+ MR+SG 
Sbjct: 63  KTYASSITGTHLLIWESEYRKNHRRKNWF--IAVNSFSYETNEDLNDKDIIIEKMRSSGK 120

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN T++AVRITH  TGI+V +S E+SQ  N   A   L   L  +  +R    RS 
Sbjct: 121 GGQHVNKTETAVRITHKKTGIVVNSSEERSQFANIKLAKARLIIELKKLSDERRKRNRSE 180


>gi|153846265|ref|ZP_01993846.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|149744945|gb|EDM56287.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
          Length = 116

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M      ++  L  R+ E++  + +   +   D +  L++EY+ +  +      Y Q + 
Sbjct: 1   MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           +      +  +   D E+R++AQ E+   ++ I  L +E+  LLLPKD +DD++C 
Sbjct: 61  DLAAAEEMAKE--DDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCY 114


>gi|256045469|ref|ZP_05448355.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 128

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/115 (38%), Positives = 67/115 (58%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 14  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 73

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILE
Sbjct: 74  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILE 128


>gi|213161326|ref|ZP_03347036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 42

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 307 RTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           R+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 1   RSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 40


>gi|265991894|ref|ZP_06104451.1| peptide chain release factor [Brucella melitensis bv. 1 str. Rev.1]
 gi|263002907|gb|EEZ15253.1| peptide chain release factor [Brucella melitensis bv. 1 str. Rev.1]
          Length = 133

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/115 (38%), Positives = 67/115 (58%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+ L   ++  L  RF+ IE +M+ +P  D Y+KL  EY+ +  ++ KI      + E  
Sbjct: 19  MIALPQDRMDQLLKRFSMIESQMANNPDSDTYVKLASEYSELQDVVGKIRELSDARMEAS 78

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           DL  +  D ++D+E+R LA  E+  +EK I  LE ++  LLLPKD  DDK+ ILE
Sbjct: 79  DLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILE 133


>gi|239982310|ref|ZP_04704834.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291454154|ref|ZP_06593544.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357103|gb|EFE84005.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 121

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 10/126 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           + + +L    A+IE R+++           KL + YA ++PI+     + Q  ++ +   
Sbjct: 3   EAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIETAR 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
            +  D             EV  +E    EL  ++  LL+P+D  DDK  ILEI+AG GG 
Sbjct: 63  ELAADDPD-------FAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGD 115

Query: 124 EAALFV 129
           E+ALF 
Sbjct: 116 ESALFA 121


>gi|88607060|ref|YP_505064.1| peptide chain release factor 2, truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598123|gb|ABD43593.1| peptide chain release factor 2, truncated [Anaplasma
           phagocytophilum HZ]
          Length = 72

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)

Query: 309 YNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
           Y     R + D R       ++ V+ G +D  I   L 
Sbjct: 23  YKMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 60


>gi|50122538|ref|YP_051705.1| peptide chain release factor-like protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613064|emb|CAG76515.1| putative peptide chain release factor [Pectobacterium atrosepticum
           SCRI1043]
          Length = 207

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 6/184 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGR 170
            +L++ A  G  E  L          R AA +  + E++ +      G  +  +  ++G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALHALTRDAARQGIECEIIETEVGKRAGTLRSALVLLNGE 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
                     G  +          G        VA   +      D    +IR +T ++S
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGVARFHQEQAFADD----EIRFETTKSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN T+SAVR TH+ +GI V   SE+SQH N+  A  ++  RL  +++++ A  R
Sbjct: 118 GPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAELR 177

Query: 290 SANR 293
           +  R
Sbjct: 178 AQRR 181


>gi|289806047|ref|ZP_06536676.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 41

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 308 TYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
           +Y     RI D R  +     + VL G +D  I   L A
Sbjct: 1   SYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 39


>gi|315497766|ref|YP_004086570.1| peptide chain release factor h [Asticcacaulis excentricus CB 48]
 gi|315415778|gb|ADU12419.1| peptide chain release factor H [Asticcacaulis excentricus CB 48]
          Length = 208

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 6/203 (2%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
               IL + +G G  E    V  L R + R A       EV++S +         + +++
Sbjct: 1   MTEIILHLTSGKGPDECCWVVAQLSRAFTREALKDGVACEVINSGEELPASL---LMSVT 57

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMR 228
           G    + +    G  +           +       V + P    +  D+  EDI   TMR
Sbjct: 58  GDQAQAFVSARVGTIQWIGDSPFRPRHKRRNWFVGVNIAPSPDAMP-DLRDEDIVFQTMR 116

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG GGQHVN TDSAVR TH  TG++V    ++SQH NR  A + L A L D +R++ ++
Sbjct: 117 ASGPGGQHVNKTDSAVRATHRSTGLVVTAQEQRSQHANRKLARQKL-AVLLDEQRQKASD 175

Query: 288 ERSANRKLQIGSGDRSERIRTYN 310
                +     + +R + +RTY 
Sbjct: 176 SARQVQWSAHQNLERGKSVRTYT 198


>gi|218297204|ref|ZP_03497866.1| PCRF domain protein [Thermus aquaticus Y51MC23]
 gi|218242481|gb|EED09020.1| PCRF domain protein [Thermus aquaticus Y51MC23]
          Length = 148

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 9/150 (6%)

Query: 35  LTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELE 94
           +++E A +   +      +   +   +L   +     ++   +L +            L 
Sbjct: 1   MSQEAARLRRTVETFRSLEGDLEGLMELWEELPAEEREALKPELLEAAKKLEVLYHETL- 59

Query: 95  NEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD 154
                         +K+ IL I+ G GG+EA  +   L RMY R+A  + ++VEV+    
Sbjct: 60  --------LNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFEVEVVDLRP 111

Query: 155 NDDGGYKEIVATISGRGVFSRMKFESGVHR 184
             + G       + G   +  +  E+GVHR
Sbjct: 112 GAEAGVDYAQILVKGENAYGLLSAEAGVHR 141


>gi|207111206|ref|ZP_03245368.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 55

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 292 NRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
            +K +IG G    +IR+Y  +  + + D R N+    +E +L G ID I+  +L A
Sbjct: 1   KKKDEIGWG---HQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIA 53


>gi|329848554|ref|ZP_08263582.1| putative peptide chain release factor H [Asticcacaulis biprosthecum
           C19]
 gi|328843617|gb|EGF93186.1| putative peptide chain release factor H [Asticcacaulis biprosthecum
           C19]
          Length = 208

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 12/213 (5%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
               IL I +G G  E    V  L + + R  A +    +VL +    +     ++ ++S
Sbjct: 1   MTEIILHISSGKGPDECCWVVTKLAQAFTREGAEQGVTCDVLDA---GEALPASLLLSVS 57

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMR 228
           G    + ++   G  +           +       VA L  + +   D+   DI   TMR
Sbjct: 58  GEAAPAFVRERIGTIQWVGDSPFRPLHKRRNWFVGVA-LAPSPQSVPDLRESDITFSTMR 116

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           ASG GGQHVN TDSAVR  H PTG++     ++SQH NR  A   L   L     +R   
Sbjct: 117 ASGPGGQHVNKTDSAVRAVHRPTGLVATAQEQRSQHANRKLATLKLALML----EERRVE 172

Query: 288 ERSANRKLQIGSG---DRSERIRTYNFSQGRIT 317
                R+ Q  +    +R   +RTY     ++ 
Sbjct: 173 AGGQARRDQWSAHQALERGNPVRTYIGPHFKLK 205


>gi|266622715|ref|ZP_06115650.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
 gi|288865552|gb|EFC97850.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
          Length = 51

 Score = 63.7 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 13/35 (37%)

Query: 312 SQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
               + DHR N     +  VL G +D  I   L  
Sbjct: 3   PYTMVKDHRTNAETGNVNSVLDGALDLFIYAYLRW 37


>gi|557260|emb|CAA57573.1| protein release factor 1 [Pseudomonas aeruginosa PAO1]
          Length = 96

 Score = 62.9 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 1  MVFLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQ 57
          M     K++  L +R+ E+   + ++  +     +   + EYA + P+I +   Y + + 
Sbjct: 1  MKASLLKKLDVLSDRYEELTALLGDAEVISDQDPFRAYSREYAEVEPVILRFRDYRKVQA 60

Query: 58 EEQDLHTVIGDHNSD 72
          + +    ++ D + +
Sbjct: 61 DLEGAQALLKDSDPE 75


>gi|241205972|ref|YP_002977068.1| peptide chain release factor H [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859862|gb|ACS57529.1| peptide chain release factor H [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 204

 Score = 62.9 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 2/177 (1%)

Query: 116 IRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSR 175
           I AG G  E  + +  L  + ER A       E       D  G K  + +++G      
Sbjct: 8   ITAGNGPVECRMALAALLGILEREAVRLGCSFETNLGPMPDQHGAKSAIVSLNGFEAEQI 67

Query: 176 MKFESGVHRVQRVPATEASGRVHTSAATVA-VLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
                G  R           +      +V  +  +    +V I   D+R +T+RA G GG
Sbjct: 68  ANDYCGTIRFTFKSQVRPGHKRQNWYVSVQRIDTKPEGGEVTIDPADLRFETLRAGGPGG 127

Query: 235 QHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           QH NTTDSAVR+ H PTG++     E+SQH+N+  A++ L A L  +E ++    +S
Sbjct: 128 QHQNTTDSAVRVLHRPTGLVATARDERSQHRNKALALRRLEAMLRHLEVEKQEAAKS 184


>gi|261822834|ref|YP_003260940.1| peptide chain release factor-like protein [Pectobacterium wasabiae
           WPP163]
 gi|261606847|gb|ACX89333.1| peptide chain release factor H [Pectobacterium wasabiae WPP163]
          Length = 207

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 6/184 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGR 170
            +L++ A  G  E  L      +   R AA +  + E++ +      G  +  +  ++G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALIRDAARQGIESEIIETEAGKRAGTLRSALVLLNGE 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
                     G  +          G        +A        +      +IR +T ++S
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGIA----RFHQERAFADNEIRFETTKSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN T+SAVR TH+ +GI V   SE+SQH N+  A  ++  RL  +++++ A  R
Sbjct: 118 GPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAELR 177

Query: 290 SANR 293
           +  R
Sbjct: 178 AQRR 181


>gi|222100136|ref|YP_002534704.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
 gi|221572526|gb|ACM23338.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
          Length = 160

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 4/135 (2%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++     E+E ++S+    D   K  E    +  + +      + +   +DL   I   
Sbjct: 29  EEVNRELKELEKKLSDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIELS 88

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             D ++ +  +  V  +EK +++LE      ++     D  +  L +  G GG+E+  + 
Sbjct: 89  EEDMDMVNQVEEIVQDLEKAVKKLEL----EIILNGKYDPNNAYLSVHPGAGGTESQDWA 144

Query: 130 GDLFRMYERYAALRK 144
             L            
Sbjct: 145 QMLLEDVHEMGRKEG 159


>gi|72012906|ref|XP_786280.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115976395|ref|XP_001185479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 101

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 270 MKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT-------YNFSQGRITDHRIN 322
           M +L+ R+Y+       +   + R  Q+  G RSE+IRT       YN+ Q RITDHR  
Sbjct: 1   MTMLQPRIYNRILADQTSSERSMRCSQVSRGGRSEKIRTTNPNLYNYNYQQDRITDHRRG 60

Query: 323 LTLYKLEYVLQGY--IDDIINPL 343
            T++ +   L G   +D+++   
Sbjct: 61  RTVHGVPAYLLGSELLDEMVTSY 83


>gi|260792422|ref|XP_002591214.1| hypothetical protein BRAFLDRAFT_247522 [Branchiostoma floridae]
 gi|229276417|gb|EEN47225.1| hypothetical protein BRAFLDRAFT_247522 [Branchiostoma floridae]
          Length = 99

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 56/86 (65%), Gaps = 3/86 (3%)

Query: 270 MKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLE 329
           M  ++ARLY ++  +  +++   R+ Q+G+  RSE+IRTYNF+Q R+TDHR  + ++ L+
Sbjct: 1   MTTIQARLYQMKLDQQRSQQQLARQQQMGTAARSEKIRTYNFTQDRVTDHRAGVNMFNLQ 60

Query: 330 YVLQGY--IDDIINPLLTA-HQAKMI 352
             L G   +D++I+ +    H+ +++
Sbjct: 61  DFLLGGDRLDEMIHTVQQHLHREEVL 86


>gi|108763642|ref|YP_629741.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
 gi|108467522|gb|ABF92707.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
          Length = 966

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 111/336 (33%), Gaps = 42/336 (12%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
            L+ R AE+          D   +  E   A   + ++++  ++ +        ++ +  
Sbjct: 661 QLEQRRAELLAETQAPNLWDDPTRAAEVIRAFRTVEAQLNELERLEAAGLFARRLVREAK 720

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
           +     ++         +++         L     T  D   +++I A       A +V 
Sbjct: 721 N-----EVQLGSAARQVEDVAREVQMAEALHASGATTQDTEALVDICASDSVEAQATWVQ 775

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           +L  MY  +A  R ++   ++ ++        +V  I+G G +  +  E+G+HR      
Sbjct: 776 ELATMYLGWAQRRGYEAVAVAEAEEP----SRVVVRIAGPGAYGFLAGEAGMHRRL---- 827

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
                                    D   +   +   R      + +   +   R     
Sbjct: 828 ------------------------EDEKRQRAYVRVHRGGSLSEEELAYLEVQGRPMKSH 863

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
            G  +    +++   +  +   +       E   + +  +   ++  G G  ++  R Y 
Sbjct: 864 EGAYL-QRVRTEVTVKDESSGRVLTLTGATELDELKDIAA---RVVYGQGSNTDEARRYY 919

Query: 311 FSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +G R+ D R      +++ VL+G +D  I   +T
Sbjct: 920 LGRGARVEDPRTGAGTPRVKDVLRGELDVFIAAWIT 955


>gi|167933019|ref|ZP_02520106.1| Protein chain release factor B [candidate division TM7 single-cell
           isolate TM7b]
          Length = 106

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 4/93 (4%)

Query: 234 GQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           GQ VNTTDSAVRITH+PTGI V   +E+SQ QN+  A+K+LR++L  ++ ++ A   +  
Sbjct: 1   GQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETALKILRSKLAQIQTEQHAETINDL 60

Query: 293 RKLQIGSGDRSERIRTYNFSQG-RITDHRINLT 324
           R  +  S +   +IR Y       I D R    
Sbjct: 61  RAGE--SANWGSQIRNYILHPYTLIKDTRTKYE 91


>gi|227325964|ref|ZP_03829988.1| peptide chain release factor-like protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 207

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 6/184 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGR 170
            +L++ A  G  E  L      +   R AA +  + EV+ +      G  +  +  ++G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALTRDAARQGIECEVIETEAGKRSGTLRSALVLLNGE 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
                     G  +          G        +A        +      +IR +  ++S
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGIA----RFHQEQAFADNEIRFEATKSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN T+SAVR TH+ +GI V   SE+SQH N+  A  ++  RL  +++++ A  R
Sbjct: 118 GPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAELR 177

Query: 290 SANR 293
           +  R
Sbjct: 178 AQRR 181


>gi|307943084|ref|ZP_07658429.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4]
 gi|307773880|gb|EFO33096.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4]
          Length = 217

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 1/129 (0%)

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRI 224
             +SG+      K  +G  R           +       V  L    +    +   D++ 
Sbjct: 65  LRLSGKDASEIAKRWTGTIRWTCQSPFRPHHKRKNWFVGVFALATERDQTETLSPSDLKF 124

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERK 283
           +T RA G GGQH NTTDSAVR+TH+PTG  +V   E+SQH+NR  A+  L  RLY +  +
Sbjct: 125 ETFRAGGPGGQHQNTTDSAVRLTHLPTGLSVVARDERSQHRNRAAALNRLHDRLYLLAAE 184

Query: 284 RMANERSAN 292
             A  +S+ 
Sbjct: 185 ADAGAKSSE 193


>gi|71027353|ref|XP_763320.1| peptide chain release factor 1 [Theileria parva strain Muguga]
 gi|68350273|gb|EAN31037.1| peptide chain release factor 1, putative [Theileria parva]
          Length = 299

 Score = 60.6 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 28  SVDAYIKLTEEYAAISPIISKISIY------DQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
            ++   + T+E    S I+S               +   D++  + D N          +
Sbjct: 48  FIEEPNESTKELVD-SEILSLYHQIYPQILQHSLGENLTDMNVNLRDMNE--------NL 98

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAA 141
               +    + ++ + +       T +    +L++  G GG E+  F  +L+ MY     
Sbjct: 99  RDEFVNLRRKLVDMQNSLFSGSLHTLNYHKILLQVLQGVGGEESGKFAAELYDMYANICN 158

Query: 142 LRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSA 201
           L   K              K    T+       R ++E GVHRVQRVP    S R+ TS+
Sbjct: 159 LNNLKH------------IKHPNNTLEIFQGLDRFRYEFGVHRVQRVPF--NSRRIQTSS 204

Query: 202 ATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI 253
           A V V+P     D++I   D+ ++TMR+SGSGGQ VN +++AVRITHIPTGI
Sbjct: 205 AVVTVVPHFNVEDINIKSSDLMVETMRSSGSGGQSVNKSETAVRITHIPTGI 256


>gi|325267596|ref|ZP_08134248.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
 gi|324980946|gb|EGC16606.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
          Length = 202

 Score = 60.6 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 69/196 (35%), Gaps = 4/196 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
             L++  G   +E   F     R   R A      VE+LS + +   G +  V  +SG  
Sbjct: 2   IYLQLSTGQAPAECQYFARFALRQMLREAEAAGLDVEILSETPSKH-GLRSAVVAVSGSL 60

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
             +  +   G  +         +         V       +        ++R +T RA G
Sbjct: 61  QDNFAQRWLGTLQWVCASPFRPNHARKNWFVAV---SRLPDFPALPEEGEVRFETCRAGG 117

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
            GGQHVN T+SAVR  H  TGI V    +       +    L A     +        +A
Sbjct: 118 KGGQHVNKTESAVRAVHTATGISVRVESERSQHANKKRALELLAVKLAAQHAEQMGRHAA 177

Query: 292 NRKLQIGSGDRSERIR 307
           +   Q+   +R   +R
Sbjct: 178 DAHAQLYQLERGNAVR 193


>gi|227112372|ref|ZP_03826028.1| peptide chain release factor-like protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 207

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 6/184 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGR 170
            +L++ A  G  E  L          R AA +    E++ +      G  +  +  ++G 
Sbjct: 2   ILLQLSAAQGPDECMLATTKALHALTRDAARQGVNCEIIETEAGKRAGTLRSALVLLNGE 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
                     G  +          G        VA   +           +IR +  ++S
Sbjct: 62  QAEPLAANWCGTLQWTCNSPWRKGGGRKNWFIGVARFHQEQA----FADHEIRFEATKSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN T+SAVR TH+ +GI V   SE+SQH N+  A  ++  RL  +++++ A  R
Sbjct: 118 GPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAELR 177

Query: 290 SANR 293
              R
Sbjct: 178 PQRR 181


>gi|326525162|dbj|BAK07851.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 149

 Score = 59.8 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 5/150 (3%)

Query: 200 SAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS- 258
           S   + +L     ++  +   D+ I  + +    G   N     VR+ HIP+G+   SS 
Sbjct: 1   STLPLKILALTRPVNFHLDDNDLEISPLPSKCENGDRRNGA--TVRVQHIPSGVTAESSG 58

Query: 259 EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF-SQGRIT 317
           E+S   N+L+A+  L+A+L  + R+    +     K  +  G   E  R Y    Q  + 
Sbjct: 59  ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRE-TRRYTLGPQELVH 117

Query: 318 DHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
           D    + L  L  VL+G I+  I   + + 
Sbjct: 118 DLNTGIQLSDLNSVLEGDIEPFIRGRIVSR 147


>gi|254472541|ref|ZP_05085940.1| putative peptide chain release factor H [Pseudovibrio sp. JE062]
 gi|211958005|gb|EEA93206.1| putative peptide chain release factor H [Pseudovibrio sp. JE062]
          Length = 212

 Score = 59.8 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 1/189 (0%)

Query: 106 TDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165
             +  +  L + +G G +E  L +       E+ A              +          
Sbjct: 1   MTEKTTVRLLLSSGDGPAECRLALCHSVAAMEKTAKKLGLSFASDPERSDLSANVASAEV 60

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRID 225
           T++G G  +  K   G  +         + +       V  LP +A    +   ED+R +
Sbjct: 61  TLAGEGAKTFAKAWCGTIKWTCQSPFRPNHKRQNWFIGVYELPVSAAEAGEFNAEDLRFE 120

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T+RA G GGQH N T+SAVR+TH+PTG  +V   E+SQH+N+  A++ L+ +L  +  + 
Sbjct: 121 TLRAGGPGGQHQNKTESAVRVTHVPTGLSVVARDERSQHRNKQIALQRLQEKLSGLSAEE 180

Query: 285 MANERSANR 293
            A  R + R
Sbjct: 181 GARLRKSER 189


>gi|207111372|ref|ZP_03245534.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 51

 Score = 59.4 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/50 (52%), Positives = 38/50 (76%)

Query: 271 KVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHR 320
           K+L+ARLY+ + +      + +RK Q+GSGDRSERIRTYN+ Q R+++HR
Sbjct: 2   KILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIRTYNYPQNRLSEHR 51


>gi|315305718|ref|ZP_07875316.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
 gi|313625914|gb|EFR95448.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
          Length = 81

 Score = 59.4 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 7  KQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           ++  +++R+ E+   +S+   V    +   L++E + I+  +     Y     + ++  
Sbjct: 3  DRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNAQIEETK 62

Query: 64 TVIGDHNSDSEIRD 77
           ++ +   D     
Sbjct: 63 ELLSEKLDDDMREM 76


>gi|218682457|ref|ZP_03530058.1| peptide chain release factor-like protein [Rhizobium etli CIAT 894]
          Length = 186

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 2/163 (1%)

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
             L  + ER A       E       D  G K  V ++ G           G  R     
Sbjct: 4   SALLDIIEREAVGLGCSFEKSLGPMPDRHGAKSAVVSLDGLEAEGIASSYCGTIRFTFKS 63

Query: 190 ATEASGRVHTSAATVA-VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
                 +       V  +        V I   D+R +T+RA G GGQH NTTDSAVRI H
Sbjct: 64  PARPGHKRQNWYVAVQRIDAGTEGGKVTIDPADLRFETLRAGGPGGQHQNTTDSAVRILH 123

Query: 249 IPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
            PTG+MV    E+SQH+N+  A++ L A L  +E ++    +S
Sbjct: 124 RPTGLMVRARDERSQHRNKALALRRLEAMLRHIEVEKQEAAKS 166


>gi|261379932|ref|ZP_05984505.1| putative peptide chain release factor H [Neisseria subflava NJ9703]
 gi|284797642|gb|EFC52989.1| putative peptide chain release factor H [Neisseria subflava NJ9703]
          Length = 212

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 71/206 (34%), Gaps = 1/206 (0%)

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
              +     L+I    G +E  +F   +       A  +    E+++ +  D  G     
Sbjct: 1   MKQNTPVIYLQISTAQGPAECRIFARFVLGKLLAQAQAKGIDAELVTET-ADKHGILSAT 59

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRI 224
             + G+   S  +   G  +                   V  LP+  ++        I  
Sbjct: 60  LKLEGQKAESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQMYEMPSENGIEF 119

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKR 284
            T R+ G GGQHVN T+SAVR TH  +GI V    +       +   +L A+        
Sbjct: 120 QTCRSGGKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAG 179

Query: 285 MANERSANRKLQIGSGDRSERIRTYN 310
            A   +  +  Q+   +R    RT+ 
Sbjct: 180 QAGSFAQEQHAQLYQVERGNPKRTFV 205


>gi|319637886|ref|ZP_07992652.1| peptide chain release factor H [Neisseria mucosa C102]
 gi|317401041|gb|EFV81696.1| peptide chain release factor H [Neisseria mucosa C102]
          Length = 206

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 69/199 (34%), Gaps = 1/199 (0%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
             L+I    G +E  +F   +       A  +    E+++ +  D  G       + G+ 
Sbjct: 2   IYLQISTAQGPAECRIFARFVLGKLLAEAQAKGIDAELVTET-ADKHGILSATLKLEGQK 60

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
             S  +   G  +                   V  LP+  +         I   T R+ G
Sbjct: 61  AESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQTYEMPSENGIEFQTCRSGG 120

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
            GGQHVN T+SAVR TH  +GI V    +       +   +L A+         A   + 
Sbjct: 121 KGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGSFAQ 180

Query: 292 NRKLQIGSGDRSERIRTYN 310
            +  Q+   +R    RT+ 
Sbjct: 181 EQHAQLYQVERGNPKRTFV 199


>gi|218670324|ref|ZP_03519995.1| peptide chain release factor-like protein [Rhizobium etli GR56]
          Length = 175

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 63/155 (40%), Gaps = 2/155 (1%)

Query: 138 RYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRV 197
           R A       +       D  G K  +  + G           G  R           + 
Sbjct: 1   REAIGLGCTFDKSLGPMPDRHGAKSAIVNLDGLHADRIAGGYCGKIRFTFESPVRPGHKR 60

Query: 198 HTSAATVA-VLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV- 255
                 V  +        V I   D R  T+RA G GGQH NTTDSAVR+ H PTG++V 
Sbjct: 61  QNWYVAVQRIQAGPEGGQVTINPADQRFQTLRAGGPGGQHQNTTDSAVRVLHRPTGLVVT 120

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
              E+SQH+N+  A++ L A L  VE ++    +S
Sbjct: 121 ARDERSQHRNKALALRRLEAMLRQVEAEKQEAAKS 155


>gi|330720433|gb|EGG98747.1| Peptide chain release factor 1 [gamma proteobacterium IMCC2047]
          Length = 44

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           TDHRINLTLYKL  +++G +D +I  L+  HQA+ + + S
Sbjct: 2   TDHRINLTLYKLPEIMEGDMDSVIQALVNEHQAEQLAALS 41


>gi|213419088|ref|ZP_03352154.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 118

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 64/115 (55%), Gaps = 7/115 (6%)

Query: 8   QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 8   KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++     D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAG
Sbjct: 68  ML----DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAG 118


>gi|225076746|ref|ZP_03719945.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens
           NRL30031/H210]
 gi|224951914|gb|EEG33123.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens
           NRL30031/H210]
          Length = 212

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 70/206 (33%), Gaps = 1/206 (0%)

Query: 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164
                    L+I    G +E  +F   +       A ++    E+++ +  D  G     
Sbjct: 1   MKQHTPVIYLQISTAQGPAECRIFARFVLGKLLAEAQVKGIDAELVTET-ADKHGILSAT 59

Query: 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRI 224
             + G+   S  +   G  +                   V  LP+  +         I  
Sbjct: 60  LKLEGQKTESLAQTWQGTLQWICPSPIRPKHPRKNWYIGVFRLPDMPQRYEMPSENGIEF 119

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKR 284
            T R+ G GGQHVN T+SAVR TH  +GI V    +       +   +L A+        
Sbjct: 120 QTCRSGGKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAG 179

Query: 285 MANERSANRKLQIGSGDRSERIRTYN 310
            A   +  +  Q+   +R    RT+ 
Sbjct: 180 QAGNFAQEQHAQLYQVERGNPKRTFV 205


>gi|162455289|ref|YP_001617656.1| putative peptide chain release factor homolog protein [Sorangium
           cellulosum 'So ce 56']
 gi|161165871|emb|CAN97176.1| putative peptide chain release factor homolog protein [Sorangium
           cellulosum 'So ce 56']
          Length = 222

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 61/208 (29%), Positives = 87/208 (41%), Gaps = 10/208 (4%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
                ++I AG G  E   FV  L    E     R   V  ++   ++D      V  + 
Sbjct: 1   MSRSWVQISAGRGPIEVRRFVARLAERMEALCQERGLAVVDVTLHGDEDAPA--SVEILV 58

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAV------LPEAAEIDVDIPLEDI 222
                  ++ E G H +    A           A VA+          A   V + L ++
Sbjct: 59  EGDARRCLEGELGTHALVERSAARGKAARKRWFAGVAIHAAGADAGAGAGEGVGVDLREL 118

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
            I   RASG GGQHVN T SAVRI H P+GI V  + E+SQ  N  R ++ +  RL +  
Sbjct: 119 EISACRASGPGGQHVNKTLSAVRIHHRPSGITVRVADERSQRANVRRGVERIAERLAERA 178

Query: 282 RKRMANERSANRKLQIGSGDRSERIRTY 309
            +R+A   +A R  +     R E +RTY
Sbjct: 179 ARRVAEGEAA-RWSEHDRIVRGEPVRTY 205


>gi|84999208|ref|XP_954325.1| peptide chain release factor 1, mitochondrial precursor [Theileria
           annulata]
 gi|65305323|emb|CAI73648.1| peptide chain release factor 1, mitochondrial precursor, putative
           [Theileria annulata]
          Length = 194

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/104 (42%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIP------------LEDI 222
           R   E GVH+V+RVP TE SGR+H+S ATVAVLP       D+               DI
Sbjct: 72  RFLREGGVHQVKRVPITEKSGRMHSSTATVAVLPSDMVKGNDMNNFDKLVEEVELNPSDI 131

Query: 223 RIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNR 266
              T RASG GGQ+VN  +++V + H PTGI +  SE+      
Sbjct: 132 EWKTCRASGPGGQNVNKVETSVSLYHKPTGIKIECSEERYRVTE 175


>gi|69249982|ref|ZP_00605073.1| PCRF [Enterococcus faecium DO]
 gi|68194043|gb|EAN08594.1| PCRF [Enterococcus faecium DO]
          Length = 139

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 8/139 (5%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQ---KKQEEQDLHTVIGDHNSDSEIRDLA 79
           M+E    D      +  +  +        +     + +E + +  ++ +    +   +  
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60

Query: 80  QIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERY 139
                     + E        +L     D  + I+E+  G GG+E+  +   L RMY R+
Sbjct: 61  -----TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRW 115

Query: 140 AALRKWKVEVLSSSDNDDG 158
           A    ++VE L    +  G
Sbjct: 116 AEQHGYQVETLDYQKSQXG 134


>gi|55958422|emb|CAI16617.1| mitochondrial translational release factor 1 [Homo sapiens]
          Length = 226

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 5/151 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIGDHN--SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG--T 120
           +    N   + ++++LA  E   I+++I  L NE+   L+PK+  D    ILE+ AG  T
Sbjct: 136 MCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTT 195

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLS 151
           GG     F  ++F MY+ Y+  + W+ E+L+
Sbjct: 196 GGDICQQFTREIFDMYQNYSCYKHWQFELLN 226


>gi|323172436|gb|EFZ58073.1| peptide chain release factor 1 domain protein [Escherichia coli
           LT-68]
          Length = 145

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 38/111 (34%), Gaps = 3/111 (2%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8   KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           ++ D       +D  +                    +L  +         E
Sbjct: 68  MLDDPEMREMAQDELREAKEKASNWNSNYRFCYCQKILMTNVTPSSKSEPE 118


>gi|46203521|ref|ZP_00208999.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 51

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 12/38 (31%), Gaps = 1/38 (2%)

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLTAH 347
               + + D R        + VL G +D  +   L   
Sbjct: 2   LQPYQLVKDLRTGTQSTDPDEVLDGDLDPFMEASLAQR 39


>gi|307265646|ref|ZP_07547199.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii
          Rt8.B1]
 gi|306919290|gb|EFN49511.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii
          Rt8.B1]
          Length = 90

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 5  SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             ++  +++R+ E+  ++S+   +   + + K  +E+AAI  I+ K   Y +  ++ + 
Sbjct: 1  MIDKLQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60

Query: 62 LHTVIGDHN 70
             ++  ++
Sbjct: 61 TKELLSSND 69


>gi|317491073|ref|ZP_07949509.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920620|gb|EFV41943.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 205

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 5/197 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L+I +  G  E AL V    +  ++ AA    KV V         G    V       
Sbjct: 2   ILLQISSAQGPDECALAVALALKQLQKEAAALGVKVTVAEQEPARRAGTLRSVLLSLDGD 61

Query: 172 VFSRMKFESG-VHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
               +        +                   VA        +  +   +I+ +++++S
Sbjct: 62  AAEHISNTWCGTLQWTCESPWRGGNGRKNWFIGVA----RYCFEDVVIEGEIKFESLKSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN T+SA+R TH+ +GI+V    +       R  K+L A   + +++ M +E  
Sbjct: 118 GPGGQHVNKTESAIRATHLASGIVVKVQTERSQHANKRLAKLLIAHKLEQQQQNMQSEIK 177

Query: 291 ANRKLQIGSGDRSERIR 307
           A R++      R   +R
Sbjct: 178 AQRRMFHHQITRGNPVR 194


>gi|253689801|ref|YP_003018991.1| peptide chain release factor H [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756379|gb|ACT14455.1| peptide chain release factor H [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 207

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 6/184 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGR 170
            +L++ A  G  E  L      +   + AA +  + E++ + +    G  +  +  ++G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALIQDAARQGIECEIIETEEGKRSGTLRSALVLLNGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
                     G  +          G        VA        +      +IR +  ++S
Sbjct: 62  RTEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGVA----RFHQEQAFADNEIRFEATKSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN T+SAVR TH+ +GI V   SE+SQH N+  A  ++  RL  +++++ A  R
Sbjct: 118 GPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLKALQQQQHAELR 177

Query: 290 SANR 293
           +  R
Sbjct: 178 AQRR 181


>gi|213026980|ref|ZP_03341427.1| peptide chain release factor 1 [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 102

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 8  QICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
          ++  L  R  E++  + ++  +   D +  L+ EYA +S +    + + Q + + +    
Sbjct: 13 KLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQM 72

Query: 65 VIGDHNSDSEIRD 77
          ++ D       ++
Sbjct: 73 MLDDPEMREMAQE 85


>gi|312891971|ref|ZP_07751474.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603]
 gi|311295602|gb|EFQ72768.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603]
          Length = 205

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 82/186 (44%), Gaps = 4/186 (2%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
            +  +++I +G G +E    V  + R+  + A      ++VL + + D  G       ++
Sbjct: 1   MEKMMIQITSGKGPAECCRVVACVQRLMLKQAKQFGVDIQVLENREADLSGTFLSATMMA 60

Query: 169 GRGVFSRMKFE-SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
                   + E  G  R           +       VA       +      +D++++T 
Sbjct: 61  QGMQLEVFRREWEGTIRWIAQSPYRRYHQRKNWFVGVAFFDIKQLMQ--WNPKDVKLETT 118

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+SG GGQHVN  ++AVR TH+P+GI V     +SQ +N+   +  L A++   + +++ 
Sbjct: 119 RSSGPGGQHVNKVETAVRGTHLPSGIQVMAMDSRSQLENKKLCLARLEAKIMVWQTEQLM 178

Query: 287 NERSAN 292
            ++ + 
Sbjct: 179 EQQHSQ 184


>gi|239623937|ref|ZP_04666968.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47_FAA]
 gi|239521968|gb|EEQ61834.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47FAA]
          Length = 196

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 13/199 (6%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
             ++I +G G +E  L VG  +R  ++     +     L  S +   G            
Sbjct: 1   MRVQISSGQGPAECELAVGLFYRQLQKERRDMR-----LVQSAHGKTGRGYSSIMFETE- 54

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
               M+   G              R       V++L +  +   D+    +R +T  + G
Sbjct: 55  --EDMRELEGSVLWICKSPFRPEHRRKNWFIDVSILEQLPDAREDM---KLRFETFCSGG 109

Query: 232 SGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
            GGQHVN  ++ VRI H+PTGI +V++  +SQH N+  AM  L   L D+E +    E+ 
Sbjct: 110 KGGQHVNKVETGVRIIHVPTGISVVSTEARSQHMNKKLAMNRLCDILADMELENRQREK- 168

Query: 291 ANRKLQIGSGDRSERIRTY 309
               L+    +R   +R Y
Sbjct: 169 ELAWLEHTRLERGNPVRIY 187


>gi|256426219|ref|YP_003126872.1| peptide chain release factor-like protein [Chitinophaga pinensis
           DSM 2588]
 gi|256041127|gb|ACU64671.1| peptide chain release factor H [Chitinophaga pinensis DSM 2588]
          Length = 210

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
               I+++ AG G  E +  V  +  M  + A  +   + +L S+     G       + 
Sbjct: 1   MNKSIIQVTAGRGPEECSRVVARVVEMMMKDARGKALDITLLESTKGHLKGTLLSAVLLI 60

Query: 169 GRGVFSRMKFE-------SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLED 221
             G  S  K          G  +           +       V V         +  L+D
Sbjct: 61  QTGGISSNKTLEAFIQEWRGTIQWVAQSPFRKYHKRKNWFVGVEVFD--VNKQQEWNLKD 118

Query: 222 IRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           +++++ RASG GGQHVN  ++AVR TH+P+G+ V     +SQ +N+   +K L A+    
Sbjct: 119 VKLESCRASGPGGQHVNKVETAVRGTHLPSGMQVLAMDSRSQLENKQLCLKRLEAKFMAW 178

Query: 281 ERKRMANERSAN 292
           + +++  ++   
Sbjct: 179 QMEQLLAKQQDQ 190


>gi|256751359|ref|ZP_05492238.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
          CCSD1]
 gi|256749741|gb|EEU62766.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
          CCSD1]
          Length = 90

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 5  SHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQD 61
             ++  +++R+ ++  ++S+   +     + K  +E+AAI  I+ K   Y +  ++ + 
Sbjct: 1  MIDKLQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60

Query: 62 LHTVIGDHN 70
             ++  ++
Sbjct: 61 TKELLSSND 69


>gi|149626821|ref|XP_001515177.1| PREDICTED: similar to peptide chain release factor 1, putative,
           partial [Ornithorhynchus anatinus]
          Length = 612

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 23/171 (13%)

Query: 124 EAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVH 183
           EAA F  +LF MY+ +      +   ++ +  +          +        + +E GVH
Sbjct: 108 EAAYFANELFEMYKNFCHSTNIQNTQINQNTLEI-------FDLGFSQNAKYLLYEFGVH 160

Query: 184 RVQRVPATEASGRVHTSAATVAVLPEAA-------------EIDVDIPLEDIRIDTMRAS 230
           RVQR+P    S R+ TS A V V+P                 I       D+ ++TMR+ 
Sbjct: 161 RVQRIPK--NSNRIQTSTAVVTVVPTGWSSCHGGRGSKDSPHIGDSFKPSDVIMETMRSR 218

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDV 280
           G+GGQ VN +++AVR+TH+PTG+ V      SQ  N+  A+  ++    D+
Sbjct: 219 GAGGQSVNKSETAVRVTHVPTGMSVSCQDTSSQIDNKSLALGKVKGMSLDM 269


>gi|115372342|ref|ZP_01459651.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1]
 gi|310819555|ref|YP_003951913.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370555|gb|EAU69481.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1]
 gi|309392627|gb|ADO70086.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 939

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 111/336 (33%), Gaps = 44/336 (13%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
           L+ R  ++          D   +      A   + ++I+  ++ +Q       ++ +  +
Sbjct: 636 LEERRNQLLSETQAPNLWDDPARAAATLRAFRTVEAQINELERMEQAVTFARRLVREAKN 695

Query: 72  DSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL-FVG 130
           +       Q+   A + E    E +++  L       +    L     +   EA   ++ 
Sbjct: 696 E------VQLTSAAKQVEEVAREVQMSEALHASGATANDVEALVDICVSDSVEAQDAWIQ 749

Query: 131 DLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPA 190
           +L  MY  +A  R ++  +++ +++       +V  I+G G +  +  E+G+HR      
Sbjct: 750 ELATMYLGWAQKRGYEAMLVAEAESPA----RVVVRIAGPGAYGFLAGEAGLHRRIEEEK 805

Query: 191 TEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIP 250
            +             V              ++ ++         QH       V      
Sbjct: 806 RQ----------RAYVRVHRGGALDAPEDLELSVE----GRPVKQHEGAFLERV------ 845

Query: 251 TGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
                    +++   +  A   +   +   E   +    +     Q  S D +   R Y 
Sbjct: 846 ---------RTEVTVKDSATGRVLTLMGSGELDELKGIATRVVSGQATSTDEA---RRYY 893

Query: 311 FSQG-RITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
             +G R+ D R      +++ VL+G +D  I   ++
Sbjct: 894 LGRGARVEDPRTGAGTPRVKDVLRGDMDLFIAAWIS 929


>gi|307688011|ref|ZP_07630457.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 80

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/80 (48%), Positives = 58/80 (72%), Gaps = 3/80 (3%)

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
           +D  R SG+GGQHVN T+SAVRITHIPTGI+    +++SQH+N+ +AMK ++A+LY++E 
Sbjct: 1   MDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEM 60

Query: 283 KRMANERS--ANRKLQIGSG 300
           ++   E+    + K  IG G
Sbjct: 61  QKKNAEKQAMEDNKSDIGWG 80


>gi|260596640|ref|YP_003209211.1| putative peptide chain release factor [Cronobacter turicensis
           z3032]
 gi|260215817|emb|CBA28276.1| Putative peptide chain release factor homolog [Cronobacter
           turicensis z3032]
          Length = 240

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 13/197 (6%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGR 170
            +L++ +  G  E  L V        + AA     + V+        G  +  + ++ G 
Sbjct: 37  ILLQLSSAQGPDECCLAVSKALEALRKEAAQADVALSVIEEEPGPRAGTLRSALVSLEGE 96

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
                 +   G  +                    AV         D+P  DIR D +RAS
Sbjct: 97  NAQPLAQRWCGTLQWICESPYRPRHARKNWFIGAAVF----TPVGDMPQSDIRFDALRAS 152

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN TDSA+R TH+ +GI V   SE+SQH N     K L   L   + +   + +
Sbjct: 153 GPGGQHVNKTDSAIRATHVASGISVKVQSERSQHAN-----KRLATLLIAHKLEEQRDAQ 207

Query: 290 SANRKLQIGSGDRSERI 306
           SA +K Q        +I
Sbjct: 208 SAGQKAQRRW--FHHQI 222


>gi|238022850|ref|ZP_04603276.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147]
 gi|237865658|gb|EEP66796.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147]
          Length = 206

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/196 (25%), Positives = 76/196 (38%), Gaps = 4/196 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
             L++  G   +E  +F   + R   R A       E+LS + +   G    V  +SG G
Sbjct: 2   IYLQLSTGQSPAECQIFAQFVLRKILREAEAAGVAAELLSQTASKH-GILSAVFALSGAG 60

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
                +   G  +                   V  LP+   +  D   + IR +T RA G
Sbjct: 61  AEDLAQRWLGTLQWIGNSPVRPKHPRKNWYIGVFRLPQIPALPDD---DSIRFETCRAGG 117

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
            GGQHVN TDSAVR TH+ TG+ V    +       +  + L A     +      + SA
Sbjct: 118 KGGQHVNKTDSAVRATHLATGVSVRVESERSQHANKKRARELLALKLAEQHSAALGQHSA 177

Query: 292 NRKLQIGSGDRSERIR 307
           +   Q+   +R   +R
Sbjct: 178 HAHSQLYQVERGNPVR 193


>gi|212697119|ref|ZP_03305247.1| hypothetical protein ANHYDRO_01685 [Anaerococcus hydrogenalis DSM
          7454]
 gi|212675894|gb|EEB35501.1| hypothetical protein ANHYDRO_01685 [Anaerococcus hydrogenalis DSM
          7454]
          Length = 87

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 5  SHKQICDLKNRFAEIELRMSESPSV---DAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  ++  F E+E ++++   +   D + K++ EY  + PI+ K +     +   ++
Sbjct: 1  MLENLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEE 60

Query: 62 LHTVIGDHNSDSE 74
             ++ +      
Sbjct: 61 NTELLKEAEDKEM 73


>gi|323486906|ref|ZP_08092222.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum
           WAL-14163]
 gi|323691951|ref|ZP_08106201.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
 gi|323399769|gb|EGA92151.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum
           WAL-14163]
 gi|323504009|gb|EGB19821.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
          Length = 197

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 77/199 (38%), Gaps = 13/199 (6%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
             ++I +G G +E  L     +R  ++     +              G K    +     
Sbjct: 1   MRIQISSGQGPAECELAAELFYRQLQKEIGDIRMVQC--------VRGSKAKGFSSVIFE 52

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
               M    G              +       V++L    ++  ++    +R +T R+ G
Sbjct: 53  TEEDMSSLEGSILWVCKSPYRPKHKRKNWYIDVSILENMPKLTQEL---KLRFETFRSGG 109

Query: 232 SGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
            GGQ+VN  ++ VR+ HIPTGI +V++  +SQH N+  A+  L   L +   +    E+ 
Sbjct: 110 KGGQNVNKVETGVRVIHIPTGISVVSTEARSQHMNKKLAVNRLCDILAERNMESGRKEK- 168

Query: 291 ANRKLQIGSGDRSERIRTY 309
               L+    +R   +R Y
Sbjct: 169 ELAWLEHNRLERGNPVRIY 187


>gi|703443|gb|AAB02290.1| release factor 1 [Streptococcus gordonii]
          Length = 67

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 3  FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEE 59
             ++Q+  +++R+ E+   +S+   V     +++L++E A+    ++    Y Q  Q  
Sbjct: 1  MNIYEQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNI 60

Query: 60 QDLHTVI 66
           D   +I
Sbjct: 61 VDAEEMI 67


>gi|300697304|ref|YP_003747965.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074028|emb|CBJ53565.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum CFBP2957]
          Length = 210

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 73/184 (39%), Gaps = 6/184 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L+  +  G +E  L V        R +A    + E++   D +  G            
Sbjct: 5   ILLQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGECAGTLRSALVSLEGD 64

Query: 172 VFSRMKFE-SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             + +     G  +                   VA               +IR +T RAS
Sbjct: 65  AEADVAQRWEGTIQWTCPSPYRPRHARKNWFFGVA----RCAAPAVTLPSEIRFETTRAS 120

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN T+SAVR  H+ TGI V   +E+SQH N+  A+ +L  RL + E    A +R
Sbjct: 121 GPGGQHVNKTESAVRAIHVATGISVKVQTERSQHANKRLAVLLLAHRLANHEEAMNAAQR 180

Query: 290 SANR 293
           +  R
Sbjct: 181 AQRR 184


>gi|68171148|ref|ZP_00544556.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999418|gb|EAM86059.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 39

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)

Query: 311 FSQGR-ITDHRINLTLYKLEYVLQGYIDDIINPLLT 345
               + + D R    +  +  VL G +D  I   LT
Sbjct: 1   MHPYQMVKDIRTGHEVGNINSVLDGNLDSFIISALT 36


>gi|226320894|ref|ZP_03796445.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233666|gb|EEH32396.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 86

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/86 (52%), Positives = 67/86 (77%)

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYK 161
           +P+D +D K+ I+EIRAGTGG EAALF  +L+ MY +Y+  +KWK E+++ ++ + GG+K
Sbjct: 1   MPQDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFK 60

Query: 162 EIVATISGRGVFSRMKFESGVHRVQR 187
           EI+  I G+ VF ++K+ESGVHRVQR
Sbjct: 61  EIIFEIKGKDVFKKLKYESGVHRVQR 86


>gi|207724424|ref|YP_002254821.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum MolK2]
 gi|206589645|emb|CAQ36606.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum MolK2]
          Length = 207

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 72/184 (39%), Gaps = 6/184 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L+  +  G +E  L V        R +A    + E++   D +  G            
Sbjct: 2   ILLQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGEHAGTLRSALVSLEGD 61

Query: 172 VFSRMKFE-SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             + +     G  +                   VA               +IR +T RAS
Sbjct: 62  AEADIAQRWEGTIQWTCPSPYRPRHARKNWFFGVA----RCAAPAVTLPSEIRFETTRAS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN T+SAVR  H+ TGI V   +E+SQH N+  A+ +L  RL   E    A +R
Sbjct: 118 GPGGQHVNKTESAVRAVHVATGISVKVQTERSQHANKRLAVLLLAHRLASHEETMNAAQR 177

Query: 290 SANR 293
           +  R
Sbjct: 178 AQRR 181


>gi|332878808|ref|ZP_08446523.1| putative peptide chain release factor H [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683159|gb|EGJ56041.1| putative peptide chain release factor H [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 235

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 5/204 (2%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATI 167
            +  I++I AG G  E    V  + +++ + A  +     ++S  + D     K +   +
Sbjct: 1   MEEKIIQITAGRGPLECQWVVAKVLKVFLQEATQKGIDYTIVSREEGDANLTIKSVTVQL 60

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            G+ + + +K   G              +         V              D++  T 
Sbjct: 61  KGKELSAFLKSWLGTVCWVGKSTFRKFHQRSNWYIG--VFELDQLQRQSFSERDVQFQTT 118

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+ G+GGQ+VN  +SAVR TH+PTG+ +     +SQ  N+  A+  LR +L ++E +++ 
Sbjct: 119 RSQGNGGQNVNKVNSAVRATHLPTGVSVFAQDSRSQLDNKKLALNRLREKLAEIELQQL- 177

Query: 287 NERSANRKLQIGSGDRSERIRTYN 310
            E++ N         R   +RT+N
Sbjct: 178 AEQAQNHWNNHTQVQRGNPVRTFN 201


>gi|225390312|ref|ZP_03760036.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme
           DSM 15981]
 gi|225043636|gb|EEG53882.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme
           DSM 15981]
          Length = 196

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 26/207 (12%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
                ++I +G G  E  L VG  ++   R       +++++S      GG+  +V    
Sbjct: 1   MADMRIQISSGQGPEECELAVGLFYQALRREVE----EIQMVSCVKGRRGGFSSVVLE-- 54

Query: 169 GRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMR 228
                +      G              +       V++L E      ++    +R +T R
Sbjct: 55  -----ADWSGLEGSVLWVCKSPLRPGHKRKNWYIDVSILEEIPRTSKEM---QVRFETFR 106

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           + G GGQ+VN  ++ VR+ HIPTGI +V++  +SQH N+  A+  L   L D + +    
Sbjct: 107 SGGKGGQNVNKVETGVRVVHIPTGIAVVSTEARSQHMNKQIALNRLCDILADRDLQC--- 163

Query: 288 ERSANRKLQIGSG-----DRSERIRTY 309
              A R+ ++        +R   +R Y
Sbjct: 164 ---ARREKELAWMEHNRLERGNPVRIY 187


>gi|213423387|ref|ZP_03356375.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 62

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 51/62 (82%)

Query: 136 YERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASG 195
           Y RYA  R+W+VE++S S+ + GGYKEI+A ISG GV+ R+KFESG HRVQRVPATE+ G
Sbjct: 1   YSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQG 60

Query: 196 RV 197
           R+
Sbjct: 61  RI 62


>gi|78066331|ref|YP_369100.1| peptide chain release factor-like protein [Burkholderia sp. 383]
 gi|77967076|gb|ABB08456.1| Class I peptide chain release factor [Burkholderia sp. 383]
          Length = 204

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 74/202 (36%), Gaps = 7/202 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT-ISGR 170
            +++I +  G  E  L   +  R  +  A  ++  V VL +   +  G        + G 
Sbjct: 1   MLMQISSAHGPLECQLAAANALRRLQAEADAQRVVVTVLDAEPGERPGTLRSALLDLDGA 60

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
           G  +     +G  +                   V            +P  D+R + MRA 
Sbjct: 61  GAQALADRWTGTLQWICASPYRLRHPRKNWFIGV----TRCADAQPLPDGDVRFEAMRAR 116

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN T SA+R TH+ TG+ V    +       R    L       E  R A++  
Sbjct: 117 GPGGQHVNKTSSAIRATHVATGLSVRVESERSQHANKRLALQLLQVRLQQEADRHASDAR 176

Query: 291 ANRKLQIGSGDRSERIRTYNFS 312
             R++Q  + +R   +R   F 
Sbjct: 177 RQRRMQHFALERGNPVR--VFH 196


>gi|126737179|ref|ZP_01752914.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6]
 gi|126721764|gb|EBA18467.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6]
          Length = 213

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 1/120 (0%)

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIP 218
           GYK  V  +SG    +  K   G  + +         +       V  LP +      I 
Sbjct: 52  GYKSAVVLVSGAEAEAFAKNWRGTIQWRAQSNLRPKHKRANWFIGVFDLPASVRTPERIQ 111

Query: 219 LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARL 277
             D+ +DT RA G GGQH NTTDSAVR TH PTG   V   E+SQH+N+  A++ L+  +
Sbjct: 112 ASDVILDTFRAGGPGGQHQNTTDSAVRATHRPTGLSAVAREERSQHRNKALALERLQHLM 171


>gi|169838095|ref|ZP_02871283.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division
           TM7 single-cell isolate TM7a]
          Length = 157

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLT---EEYAAISPIISKISIYDQKKQEEQDLH 63
           +++ D+  +  E+  ++ +   V    K+    +   +I  ++ K + Y  +K+E + L 
Sbjct: 3   QKLDDVVLKHKELTEKLMDPEVVSDPKKIMEYNKALNSIDEVVKKYTYYKSRKEELEGLK 62

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
             +     D+E++++   E+  IE+EI  LE E+  LLLPKD +DDK+ I+E
Sbjct: 63  EDLKIEK-DAEMKEMMHEEIHLIEEEIPHLEEELKVLLLPKDPNDDKNVIME 113


>gi|169837781|ref|ZP_02870969.1| peptide chain release factor 1 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 63

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/59 (64%), Positives = 46/59 (77%)

Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
           +QRVP+TE+ GRVHTS  TVAVLPEA E D++I   D++ID  R+ G GGQ VNTTDSA
Sbjct: 1   MQRVPSTESQGRVHTSTVTVAVLPEAEETDIEINPNDLKIDVFRSGGHGGQSVNTTDSA 59


>gi|300770278|ref|ZP_07080157.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762754|gb|EFK59571.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 232

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 4/154 (2%)

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           G        ISG    +     +G  +         S +       + V           
Sbjct: 50  GTVISASLKISGENCMAFSALWTGTIQWIGKSDFRKSHKRKNWF--IEVFEIKPSASWIF 107

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRAR 276
            ++DIR   MR+SG+GGQHVN   SAVR TH+PTG+ +V    +SQHQN+  A + L+ +
Sbjct: 108 DVKDIRYQAMRSSGAGGQHVNKVSSAVRATHMPTGVSVVAMDSRSQHQNKKIATERLQTK 167

Query: 277 LYDVERKRMANERSANRKLQIGSGDRSERIRTYN 310
           + ++               QI   +R   IRT+ 
Sbjct: 168 VNELNLLHWKENEKYKWFNQI-QVERGNAIRTFV 200


>gi|29346864|ref|NP_810367.1| peptide chain release factor-like protein [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|29338761|gb|AAO76561.1| putative peptide chain release factor [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 206

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 71/184 (38%), Gaps = 4/184 (2%)

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
              L+I +G G +E    V  +     R A     K+E++                    
Sbjct: 4   KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKMEMIEREVGPVNRTLLSATIALQG 63

Query: 171 GVFSRMKFE-SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
                +  E  G  +           +       V V         +    D R +T+RA
Sbjct: 64  AASGELADEWEGTVQWIAQSPYRIYHKRKNWF--VGVHSFVLSESQEATERDFRYETLRA 121

Query: 230 SGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQHVN T+SAVR  HIP+G+ +V S ++SQ QN+  A + L  +L     ++   +
Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMIQ 181

Query: 289 RSAN 292
              N
Sbjct: 182 AQEN 185


>gi|298386489|ref|ZP_06996045.1| peptide chain release factor H [Bacteroides sp. 1_1_14]
 gi|298260866|gb|EFI03734.1| peptide chain release factor H [Bacteroides sp. 1_1_14]
          Length = 206

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 71/184 (38%), Gaps = 4/184 (2%)

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
              L+I +G G +E    V  +     R A     KVE++                    
Sbjct: 4   KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQG 63

Query: 171 GVFSRMKFE-SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
                +  E  G  +           +       V V         +    D R +T+RA
Sbjct: 64  TASGELADEWEGTVQWIAQSPYRIYHKRKNWF--VGVHSFVLSESQEATERDFRYETLRA 121

Query: 230 SGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQHVN T+SAVR  HIP+G+ +V S ++SQ QN+  A + L  +L     ++   +
Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMIQ 181

Query: 289 RSAN 292
              N
Sbjct: 182 AQEN 185


>gi|261884219|ref|ZP_06008258.1| peptide chain release factor 2 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 115

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 2/110 (1%)

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
            +   K    D + +    N++ +  +     +    + +      +   ++    DD K
Sbjct: 8   KFKNVKSAISDAYELYELANAEDD--EQTINSLFEDAQNLENKITNLEISMMLSGEDDSK 65

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY 160
           + I+ I  G GG+E+  +   L+RMY R+     +KVE L   + D+ G 
Sbjct: 66  NAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGL 115


>gi|253572326|ref|ZP_04849729.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838101|gb|EES66189.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 206

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 71/184 (38%), Gaps = 4/184 (2%)

Query: 111 SCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
              L+I +G G +E    V  +     R A     KVE++                    
Sbjct: 4   KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQG 63

Query: 171 GVFSRMKFE-SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
                +  E  G  +           +       V V         +    D R +T+RA
Sbjct: 64  AASGELADEWEGTVQWIAQSPYRIYHKRKNWF--VGVHSFVLSESQEATERDFRYETLRA 121

Query: 230 SGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQHVN T+SAVR  HIP+G+ +V S ++SQ QN+  A + L  +L     ++   +
Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMIQ 181

Query: 289 RSAN 292
              N
Sbjct: 182 AQEN 185


>gi|281414236|ref|ZP_06245978.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665]
          Length = 107

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 26/68 (38%)

Query: 8  QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +  +K   AE+E + S     D   +  +  + +S   + +      +   +DL T++ 
Sbjct: 25 DLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSLESRIEDLETMVE 84

Query: 68 DHNSDSEI 75
              + E 
Sbjct: 85 LAAEEDEP 92


>gi|213420646|ref|ZP_03353712.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 112

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 5/114 (4%)

Query: 54  QKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
           Q   +   L  +  + + +    +       A    + E   ++ +  +     D   C 
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAV-----AELNTLEEKLAQLEFRRMFSGEYDSADCY 57

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
           L+I+AG+GG+EA  +   L RMY R+A  R +K EV+  S+ +  G K     I
Sbjct: 58  LDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKI 111


>gi|160935130|ref|ZP_02082513.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441861|gb|EDP19558.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC
           BAA-613]
          Length = 198

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 5/130 (3%)

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G  +           R       V++L +   I  +     +R +T R+ G GGQHVN  
Sbjct: 62  GSVQWICKSPYRPGHRRKNWYVDVSILDQVPRISEE---RMVRFETFRSGGKGGQHVNKV 118

Query: 241 DSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGS 299
           ++ VR  HIPTG  +V++  +SQH N+  AM  L + L ++  +    E+S    ++   
Sbjct: 119 ETGVRAIHIPTGTAVVSTQARSQHMNKQIAMDRLCSILAEMNARNQQKEKS-LAWMEHAR 177

Query: 300 GDRSERIRTY 309
            +R   +R Y
Sbjct: 178 LERGNPVRIY 187


>gi|239835036|ref|ZP_04683364.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
 gi|239823099|gb|EEQ94668.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
          Length = 136

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 1/109 (0%)

Query: 183 HRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDS 242
           + +          +      +V+ +   A  D+ I   D+R +T+RA G GGQH NT+DS
Sbjct: 8   YLLVFKSPVRPQHKRQHWFISVSRIARPAINDIVIQPNDVRFETLRAGGPGGQHQNTSDS 67

Query: 243 AVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           AVR+ HIPTG  ++  +E+SQH+N+  A++ L   L  ++   + N  +
Sbjct: 68  AVRVVHIPTGIQLIARNERSQHRNKATALERLEMVLKHLQEDEIENAEA 116


>gi|290984795|ref|XP_002675112.1| predicted protein [Naegleria gruberi]
 gi|284088706|gb|EFC42368.1| predicted protein [Naegleria gruberi]
          Length = 156

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 9/156 (5%)

Query: 42  ISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLL 101
           +   ++ I          ++L  +  +  +D E+ +  Q  +  +   + + E       
Sbjct: 2   LEDQLNFIDNTIADINNNEELLKL-SEMENDKEMIEYIQKSLSDLINVLEKKE----IES 56

Query: 102 LPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMY---ERYAALRKWKVEVLSSSDNDDG 158
                 D K C LEI  G GG +A+ +   L  MY    R + L  ++V +  +S  +  
Sbjct: 57  FLSGPHDSKDCYLEIHTGAGGEDASDWSQMLLNMYINCLRGSELSSFEVTLEDTSFKET- 115

Query: 159 GYKEIVATISGRGVFSRMKFESGVHRVQRVPATEAS 194
           G +  +  ISGR  +  +K E GVHR+ R+    A 
Sbjct: 116 GIRSALLFISGRYAYGYLKHEQGVHRLVRLSPFNAD 151


>gi|331001770|ref|ZP_08325292.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412744|gb|EGG92127.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 200

 Score = 50.2 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 10/199 (5%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            IL++ AG G  E    V  + R   +                N   G ++         
Sbjct: 1   MILQLSAGMGPVECQRAVFGICRELMKE--------IPSPEILNYVAGAEDETFLSVMLY 52

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
               + +  G              +       V+++PE  E++ +    D+RI+   A+G
Sbjct: 53  SKQDVSYLEGSMLWICKSKYRPWHKRKNWFIDVSIIPETTEMEENFSENDLRIEKFHANG 112

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
            GGQ+VN  ++ VR+ HIP+GI V+S+ E+SQ  N+  A++ L   L           R+
Sbjct: 113 PGGQNVNKVETGVRVIHIPSGIRVSSTRERSQLLNKKDAIRKLAIVLKSRNDFEKVKSRN 172

Query: 291 ANRKLQIGSGDRSERIRTY 309
                +     R   +R Y
Sbjct: 173 NAW-SKHSEIVRGNPVRIY 190


>gi|300693607|ref|YP_003749580.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum PSI07]
 gi|299075644|emb|CBJ34941.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum PSI07]
          Length = 207

 Score = 50.2 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 71/194 (36%), Gaps = 5/194 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGR 170
            +L+  +  G  E  L V       +R +A    +VEV+   D +  G  +  + ++ G 
Sbjct: 2   ILLQFSSAQGPVECELAVVKALAYLQRESAQAGVRVEVIEQEDGERPGTLRSALVSLEGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
              +  +   G  +                   VA               +IR +T R+S
Sbjct: 62  AEAAAAQRWEGTIQWTSPSPYRPRHARKNWFFGVA----RCATPAVTLPSEIRFETTRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN T+SAVR  H+ TGI V    +       R   +L A       + M   + 
Sbjct: 118 GPGGQHVNKTESAVRAIHMATGISVKVQTERSQHANKRLAVLLLAHKLASHDEAMNAAQR 177

Query: 291 ANRKLQIGSGDRSE 304
           A R+      +R  
Sbjct: 178 AQRRTLHRQVERGN 191


>gi|255605645|ref|XP_002538425.1| conserved hypothetical protein [Ricinus communis]
 gi|223512202|gb|EEF23957.1| conserved hypothetical protein [Ricinus communis]
          Length = 75

 Score = 50.2 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 243 AVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
           AV +TH PTG+ VT   +SQ  NR  A   L  +L  V +       +A+++ Q+G+G R
Sbjct: 2   AVVLTHRPTGVSVTIDSRSQADNRRVARDELLRKLRAVSKADEVATAAADKRAQVGTGQR 61

Query: 303 SERIRTYNFSQGRI 316
            +++R+Y   Q ++
Sbjct: 62  GDKVRSYQ-VQNQV 74


>gi|53714002|ref|YP_099994.1| peptide chain release factor-like protein [Bacteroides fragilis
           YCH46]
 gi|253567006|ref|ZP_04844457.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764352|ref|ZP_06092920.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52216867|dbj|BAD49460.1| putative peptide chain release factor [Bacteroides fragilis YCH46]
 gi|251944130|gb|EES84639.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263256960|gb|EEZ28306.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301163677|emb|CBW23231.1| putative peptide chain release factor [Bacteroides fragilis 638R]
          Length = 206

 Score = 49.4 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 6/185 (3%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
            +   L+I +G G  E    V  +     R A  RK +VE+L             V  ++
Sbjct: 1   MEKTYLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVV-VA 59

Query: 169 GRGVFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDT 226
             G    +  +     V  +         R       V V         +   +DIR +T
Sbjct: 60  LEGAGCDVLADEWEGTVLWIARSPYRIHHRRKNWF--VGVQTFLLSESREATEDDIRYET 117

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
           +RASG GGQHVN T+SAVR  HIP+GI +V S ++SQ QN+  A + L  +L     ++ 
Sbjct: 118 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNIEQA 177

Query: 286 ANERS 290
             +  
Sbjct: 178 MIQAQ 182


>gi|297569022|ref|YP_003690366.1| ABC transporter related protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924937|gb|ADH85747.1| ABC transporter related protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 668

 Score = 49.4 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 9   ICDLKNRFAEIELRMSESPS---VDAYIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHT 64
           +   + R  E+E  +++       + + +L++EYA +   +      +++   E +++ T
Sbjct: 607 VEKQEQRKDELEKLLADPEIYHRQEEFAELSKEYAELERRLERLYDQWEKVNSEIEEILT 666


>gi|218516475|ref|ZP_03513315.1| peptide chain release factor 1 [Rhizobium etli 8C-3]
          Length = 133

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 27/43 (62%)

Query: 1  MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS 43
          M  L  +++ +L+ RF EIE RMS  P+ D Y+KL  EY+ + 
Sbjct: 1  MAKLPVEKMLELERRFDEIEARMSAGPAADVYVKLASEYSELQ 43


>gi|33322102|gb|AAQ06771.1|AF496112_1 peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 64

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/64 (50%), Positives = 46/64 (71%)

Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
           A+LF GDL RMYE+YA  + WKV ++ S   + GGYK +   I+G  V+S++K+E+G HR
Sbjct: 1   ASLFAGDLLRMYEKYAENQGWKVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHR 60

Query: 185 VQRV 188
           VQR+
Sbjct: 61  VQRI 64


>gi|228472445|ref|ZP_04057207.1| putative peptide chain release factor H [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276130|gb|EEK14877.1| putative peptide chain release factor H [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 231

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 5/202 (2%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATI 167
            +  I++I AG G  E    V  + + + + A        +LS  + D     K +   +
Sbjct: 1   MEEKIIQITAGRGPLECQWVVAKVLKTFLQEATQAGISYTILSREEGDANLTVKSVTLQL 60

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            G+ + S +K   G              +         V              D++  T 
Sbjct: 61  KGKELASFLKTWLGTVCWVGKSTFRKFHQRSNWYIG--VFELDQLQRQLFSERDVQFQTT 118

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+ G+GGQ+VN  +SAVR TH+PTGI V     +SQ  N+  A+  L+ +L ++E +++ 
Sbjct: 119 RSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQL- 177

Query: 287 NERSANRKLQIGSGDRSERIRT 308
            E++ N         R   +RT
Sbjct: 178 AEQAQNHWNNHTQVQRGNPVRT 199


>gi|297517598|ref|ZP_06935984.1| peptide chain release factor 1 [Escherichia coli OP50]
          Length = 92

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 8  QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
          ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + + Q +++ +    
Sbjct: 8  KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67

Query: 65 VIGDHNSDSEIRD 77
          ++ D       +D
Sbjct: 68 MLDDPEMREMAQD 80


>gi|213963016|ref|ZP_03391275.1| putative peptide chain release factor H [Capnocytophaga sputigena
           Capno]
 gi|213954357|gb|EEB65680.1| putative peptide chain release factor H [Capnocytophaga sputigena
           Capno]
          Length = 230

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 9/204 (4%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATI 167
            +  I++I AG G  E    V  + + + + AA       +LS  + D     K +   +
Sbjct: 1   MQEKIIQITAGRGPLECQWVVAKVLKTFLQEAAQAGIDYTILSREEGDANLTVKSVTLQL 60

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            G+ +   +K   G              +         V              D++  T 
Sbjct: 61  KGKELAPFLKTWLGTVCWVGKSTFRKFHQRSNWYIG--VFELDQLQRQTFSERDVQFQTT 118

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+ G+GGQ+VN  +SAVR TH+PTGI V     +SQ  N+  A+  L+ +L ++E +++A
Sbjct: 119 RSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQLA 178

Query: 287 NERSA--NRKLQIGSGDRSERIRT 308
            +  +  N   Q+    R   +RT
Sbjct: 179 EQAQSHWNNHTQV---QRGNPVRT 199


>gi|255009670|ref|ZP_05281796.1| peptide chain release factor-like protein [Bacteroides fragilis
           3_1_12]
 gi|313147455|ref|ZP_07809648.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12]
 gi|313136222|gb|EFR53582.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12]
          Length = 207

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 6/187 (3%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
            +   L+I +G G  E    V  +     + A  RK KVE++                I+
Sbjct: 2   MEKTYLQITSGRGPVECCRVVALVLERILKQAQTRKLKVEIVEKEAGPANRTLLSAV-IA 60

Query: 169 GRGVFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDT 226
             G       E     V  +         R       V V         +    +IR +T
Sbjct: 61  LEGAGCDTLVEEWEGTVLWIARSPYRIHHRRKNWF--VGVQTFLLSESREATENEIRYET 118

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
           +RASG GGQHVN T+SAVR  HIP+GI +V S ++SQ QN+  A + L  +L     ++ 
Sbjct: 119 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNVEQA 178

Query: 286 ANERSAN 292
             +  AN
Sbjct: 179 MIQAQAN 185


>gi|326334366|ref|ZP_08200579.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325693450|gb|EGD35376.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 233

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 9/204 (4%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG-GYKEIVATI 167
            +  I++I AG G  E    V  + +++ + A        +LS  + D     K +   +
Sbjct: 1   MQEKIIQITAGRGPLECQWVVAKVLKVFLQEATQAGISYTILSREEGDANLTVKSVTVQL 60

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            G+ + + +K   G              +         V              D++  T 
Sbjct: 61  KGKELAAFLKTWLGTVCWVGKSTFRKFHQRSNWYIG--VFELDQLQRQPFSECDVQFQTT 118

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           R+ G+GGQ+VN  +SAVR TH+PTGI V     +SQ  N+  A+  L+ +L ++E ++++
Sbjct: 119 RSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKFALARLKEKLIEIELQQLS 178

Query: 287 NERSA--NRKLQIGSGDRSERIRT 308
            +  +  N   Q+    R   +RT
Sbjct: 179 EQAQSHWNNHTQV---QRGNPVRT 199


>gi|224538378|ref|ZP_03678917.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520007|gb|EEF89112.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 205

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 4/186 (2%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATI 167
            +   ++I +G G +E    V  +     + A  +  K E++   +   +      V ++
Sbjct: 1   MEKVYMQITSGRGPAECCRVVALVLEKILKQAVAKGVKTEIVERETGPLNRTLLSAVISL 60

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            G    + ++   G  +           +       V V         +    +IR +T+
Sbjct: 61  QGGDYHALIEDWEGSVQWIAQSPYRIYHKRKNWF--VGVQTFTLSESQEATEAEIRYETL 118

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
           RASG GGQHVN T+SAVR  HIPTG+ +V S ++SQ QN+  A + L  +L     ++  
Sbjct: 119 RASGPGGQHVNKTESAVRAVHIPTGMSVVASDQRSQWQNKKLATERLLLKLASWSIEQAM 178

Query: 287 NERSAN 292
            +  AN
Sbjct: 179 IQAQAN 184


>gi|60682199|ref|YP_212343.1| peptide chain release factor-like protein [Bacteroides fragilis
           NCTC 9343]
 gi|60493633|emb|CAH08422.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
          Length = 206

 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 6/185 (3%)

Query: 109 DKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATIS 168
            +   L+I +G G  E    V  +     R A  RK +VE+L             V  ++
Sbjct: 1   MEKTYLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVV-VA 59

Query: 169 GRGVFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDT 226
             G    +  +     V  +         R       V V         +   +DIR +T
Sbjct: 60  LEGAGCDVLADEWEGTVLWIARSPYRIHHRRKNWF--VGVQTFLLSESCEATEDDIRYET 117

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRM 285
           +RASG GGQHVN T+SAVR  HIP+GI +V S ++SQ QN+  A + L  +L     ++ 
Sbjct: 118 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNIEQA 177

Query: 286 ANERS 290
             +  
Sbjct: 178 MIQAQ 182


>gi|315652605|ref|ZP_07905584.1| chain release factor B [Eubacterium saburreum DSM 3986]
 gi|315485145|gb|EFU75548.1| chain release factor B [Eubacterium saburreum DSM 3986]
          Length = 199

 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
           +  G              +       V+++PE   +D +    DI ++   ASG GGQ+V
Sbjct: 59  YIEGTMLWICKSRYRPEHKRKNWFVDVSIIPETVNVDDNFSEADIIVEKFHASGPGGQNV 118

Query: 238 NTTDSAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQ 296
           N  ++ VR+ HIPTGI ++S+ E+SQ  N+  A++ L   L +    ++   ++     +
Sbjct: 119 NKVETGVRVIHIPTGIRISSTRERSQLMNKKDALRKLAIVLKNKNTSQIEQSKNNAW-SK 177

Query: 297 IGSGDRSERIRTY 309
                R   IR Y
Sbjct: 178 HTEIVRGNPIRVY 190


>gi|70729456|ref|YP_259194.1| peptide chain release factor-like protein [Pseudomonas fluorescens
           Pf-5]
 gi|68343755|gb|AAY91361.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf-5]
          Length = 206

 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD-GGYKEIVATISGR 170
            +L++ +  G +E  L V    R     A  +  ++ ++    +     ++ ++ ++ G 
Sbjct: 3   MLLQLSSAQGPAECELAVTHALRRLHHEAEAQNVRLGIIEQVASQARDAHRSVLVSLDGE 62

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
              +  +  +G            + R            +      +    +IR + MRAS
Sbjct: 63  HAANLARRWTGTLLWICKSPLRPAHRRKNWYFA----GQPFCALEEAEGGEIRFEAMRAS 118

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ TGI V    +    +  R  ++L  +     +++   E  
Sbjct: 119 GPGGQHVNKTDSAVRATHVATGISVKVQSERSQHDNKRLARLLIQQRLADRQEQSVQELR 178

Query: 291 ANRKLQIGSGDRSERIRT 308
             R+      +R   +RT
Sbjct: 179 LQRRDAHHRVERGNAVRT 196


>gi|71027355|ref|XP_763321.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350274|gb|EAN31038.1| hypothetical protein TP03_0303 [Theileria parva]
          Length = 81

 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVL-QG-YIDDIINPLLTAHQAK 350
           R  Q  +GDRSERIRT N+    ITDHR  +TL  ++  L  G  I+ I   L     AK
Sbjct: 6   RMSQYRTGDRSERIRTINYLHDSITDHRCRVTLDGVDSYLSSGHGIEKIHQALTQLDNAK 65

Query: 351 MIG 353
           +I 
Sbjct: 66  IIQ 68


>gi|163754646|ref|ZP_02161768.1| putative peptide chain release factor [Kordia algicida OT-1]
 gi|161325587|gb|EDP96914.1| putative peptide chain release factor [Kordia algicida OT-1]
          Length = 198

 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 181 GVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTT 240
           G  +        A  +       V V        +    ++I++ T R+SG+GGQHVN  
Sbjct: 70  GSIQFIFRSPYRAHHQRKNWFVDVKVYV--MPTQISWSPKEIQVKTARSSGAGGQHVNKV 127

Query: 241 DSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           ++AV + HIPTGI V  S E+SQ  N+  A   L   +    +K+        
Sbjct: 128 ETAVSMIHIPTGITVQASEERSQFLNKKLAFARLDIAIKAQNQKQQNAIEKQK 180


>gi|301019126|ref|ZP_07183330.1| putative peptide chain release factor H [Escherichia coli MS 69-1]
 gi|300399385|gb|EFJ82923.1| putative peptide chain release factor H [Escherichia coli MS 69-1]
          Length = 204

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + ++++ +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQKNSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|269119386|ref|YP_003307563.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386]
 gi|268613264|gb|ACZ07632.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386]
          Length = 206

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 10/196 (5%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
             + I +G G  E    V + F+  ++  A    +   + S    + G K          
Sbjct: 1   MRMIISSGNGPQECEKAVYEYFKYLKKEFAKYNIEYRYIES----EAGNKAKTFRSVVLQ 56

Query: 172 VFSRMKFE---SGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMR 228
           +    KF    +G            + R         ++ E   ++  I  +   I TMR
Sbjct: 57  IKENTKFTNIYTGTILWINESIYRKNHRRKNWYIKSVLIKENEFLNKSISKKTTEITTMR 116

Query: 229 ASGSGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           +SG+GGQ+VN  ++AVRI HIPTGI +V+  E++Q+ N+  A+K L  +L ++E      
Sbjct: 117 SSGNGGQNVNKLETAVRIKHIPTGISIVSREERTQYANKKAAVKKLEEKLTNMEIYHQKE 176

Query: 288 ERSANR--KLQIGSGD 301
           E       K +I  G+
Sbjct: 177 EEMKIWSVKNEIERGN 192


>gi|266622646|ref|ZP_06115581.1| putative peptide chain release factor H [Clostridium hathewayi DSM
           13479]
 gi|288865627|gb|EFC97925.1| putative peptide chain release factor H [Clostridium hathewayi DSM
           13479]
          Length = 206

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 23/204 (11%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
             ++I +G G +E  L VG L+   +R A         +       G  +E  ++I    
Sbjct: 1   MRIQISSGQGPAECELAVGLLYEELKREAPD-------IRLLSFTQGKKREGFSSIMFET 53

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
                  E  V  + + P      +       V++L     +  +   + +R +T ++ G
Sbjct: 54  EHDFTSLEGSVLWICKSPYRP-EHKRKNWYVDVSILETVPRVTEE---KLVRFETFKSGG 109

Query: 232 SGGQHVNTTDSAVRITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
            GGQ+VN  ++ VR  HIPTG  +V++  +SQH N+  A+  L   L ++  +      S
Sbjct: 110 KGGQNVNKVETGVRAIHIPTGTAVVSTEARSQHMNKQAALNRLCEILAEMNLE------S 163

Query: 291 ANRKLQIGSG-----DRSERIRTY 309
             R+  +        +R   +R Y
Sbjct: 164 GRREKNLAWMEHTRLERGNPVRVY 187


>gi|227357000|ref|ZP_03841372.1| peptide chain release factor [Proteus mirabilis ATCC 29906]
 gi|227162878|gb|EEI47837.1| peptide chain release factor [Proteus mirabilis ATCC 29906]
          Length = 203

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 5/182 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L+  +  G  E  + V      +      R+    ++   +    G K ++ ++ G  
Sbjct: 1   MLLQFSSAQGPEECCIAVEKTLNYFLTVTEQRQ-VDVIILEQEPSRYGLKSVLVSLKGAE 59

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
             +  +  SG  + Q         +       +A      E   +I   +I  +TMRA+G
Sbjct: 60  AKAIAQQWSGTVQWQCTSTLRPKHKRKNWFIGIA----YFEPPQEIQDTEILFETMRANG 115

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
            GGQHVN T SAVR THI TGI V    +       +  K L A   +    +     + 
Sbjct: 116 PGGQHVNKTSSAVRATHIATGISVKIQSQRSQHANKKLAKQLIAWHLNHYLSQQQASFNN 175

Query: 292 NR 293
            R
Sbjct: 176 QR 177


>gi|293403381|ref|ZP_06647472.1| prfH [Escherichia coli FVEC1412]
 gi|293408390|ref|ZP_06652229.1| peptide chain release factor H [Escherichia coli B354]
 gi|298378993|ref|ZP_06988874.1| prfH [Escherichia coli FVEC1302]
 gi|300898963|ref|ZP_07117256.1| putative peptide chain release factor H [Escherichia coli MS 198-1]
 gi|59889806|emb|CAH19162.1| Probable peptide chain release factor [Escherichia coli]
 gi|284920069|emb|CBG33127.1| putative peptide chain release factor [Escherichia coli 042]
 gi|291429234|gb|EFF02254.1| prfH [Escherichia coli FVEC1412]
 gi|291471568|gb|EFF14051.1| peptide chain release factor H [Escherichia coli B354]
 gi|298280106|gb|EFI21610.1| prfH [Escherichia coli FVEC1302]
 gi|300357405|gb|EFJ73275.1| putative peptide chain release factor H [Escherichia coli MS 198-1]
          Length = 204

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   + VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAITVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|328463691|gb|EGF35277.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC
          5462]
          Length = 76

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 9  ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
          +  L  R+  +E  MS+   +     Y+ L++E   +  +++    Y Q   + ++   V
Sbjct: 1  MDGLLVRYEGLEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESEEV 60

Query: 66 IGDHNSDSE 74
          + +   +  
Sbjct: 61 LRESKDEDM 69


>gi|94269500|ref|ZP_01291480.1| ABC transporter related [delta proteobacterium MLMS-1]
 gi|93451197|gb|EAT02108.1| ABC transporter related [delta proteobacterium MLMS-1]
          Length = 301

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 4/60 (6%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHT 64
           +  L+ R A +E ++++  + +    + +L++EYA +   + S    +DQ +QE + L T
Sbjct: 241 VDKLEGRKAALEKQLADPETYNRQDQFTELSKEYAEVQRRLESLYEQWDQLQQELETLQT 300


>gi|254690017|ref|ZP_05153271.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 35

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 23/33 (69%)

Query: 325 LYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           LYKL+ V++G +D++++ L++ HQ  ++    E
Sbjct: 1   LYKLDRVMEGDLDELVDALISDHQTALLAELGE 33


>gi|117622538|ref|YP_851451.1| peptide chain release factor-like protein [Escherichia coli APEC
           O1]
 gi|115511662|gb|ABI99736.1| peptide chain release factor-like protein [Escherichia coli APEC
           O1]
          Length = 232

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 30  ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 89

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 90  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 145

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 146 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 205

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 206 SQRRMFHHQIERGNPRRT 223


>gi|227884748|ref|ZP_04002553.1| peptide chain release factor family protein [Escherichia coli
           83972]
 gi|300977367|ref|ZP_07173858.1| putative peptide chain release factor H [Escherichia coli MS 45-1]
 gi|301045877|ref|ZP_07193064.1| putative peptide chain release factor H [Escherichia coli MS 185-1]
 gi|331656314|ref|ZP_08357276.1| putative peptide chain release factor H [Escherichia coli TA206]
 gi|331681653|ref|ZP_08382286.1| putative peptide chain release factor H [Escherichia coli H299]
 gi|26106678|gb|AAN78863.1|AE016756_46 Peptide chain release factor homolog [Escherichia coli CFT073]
 gi|222032084|emb|CAP74823.1| Peptide chain release factor homolog [Escherichia coli LF82]
 gi|227838349|gb|EEJ48815.1| peptide chain release factor family protein [Escherichia coli
           83972]
 gi|300302127|gb|EFJ58512.1| putative peptide chain release factor H [Escherichia coli MS 185-1]
 gi|300409892|gb|EFJ93430.1| putative peptide chain release factor H [Escherichia coli MS 45-1]
 gi|307552166|gb|ADN44941.1| peptide chain release factor-like protein [Escherichia coli ABU
           83972]
 gi|312944860|gb|ADR25687.1| peptide chain release factor-like protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315295160|gb|EFU54495.1| putative peptide chain release factor H [Escherichia coli MS 153-1]
 gi|315300862|gb|EFU60084.1| putative peptide chain release factor H [Escherichia coli MS 16-3]
 gi|323191394|gb|EFZ76656.1| putative peptide chain release factor H [Escherichia coli RN587/1]
 gi|331054562|gb|EGI26571.1| putative peptide chain release factor H [Escherichia coli TA206]
 gi|331080855|gb|EGI52020.1| putative peptide chain release factor H [Escherichia coli H299]
          Length = 204

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVRKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|191171385|ref|ZP_03032934.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300991271|ref|ZP_07179531.1| putative peptide chain release factor H [Escherichia coli MS 200-1]
 gi|110342064|gb|ABG68301.1| putative peptide chain release factor [Escherichia coli 536]
 gi|190908319|gb|EDV67909.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300305588|gb|EFJ60108.1| putative peptide chain release factor H [Escherichia coli MS 200-1]
 gi|324015571|gb|EGB84790.1| putative peptide chain release factor H [Escherichia coli MS 60-1]
          Length = 204

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|237707745|ref|ZP_04538226.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA]
 gi|306813274|ref|ZP_07447467.1| peptide chain release factor-like protein [Escherichia coli NC101]
 gi|91070898|gb|ABE05779.1| peptide chain release factor-like protein [Escherichia coli UTI89]
 gi|226898955|gb|EEH85214.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA]
 gi|281177449|dbj|BAI53779.1| peptide chain release factor [Escherichia coli SE15]
 gi|294492701|gb|ADE91457.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli IHE3034]
 gi|305854037|gb|EFM54476.1| peptide chain release factor-like protein [Escherichia coli NC101]
 gi|307628262|gb|ADN72566.1| peptide chain release factor-like protein [Escherichia coli UM146]
 gi|315287746|gb|EFU47149.1| putative peptide chain release factor H [Escherichia coli MS 110-3]
 gi|320197281|gb|EFW71897.1| peptide chain release factor-like protein [Escherichia coli
           WV_060327]
 gi|323953122|gb|EGB48990.1| RF-1 domain-containing protein [Escherichia coli H252]
 gi|323958696|gb|EGB54397.1| RF-1 domain-containing protein [Escherichia coli H263]
 gi|324010206|gb|EGB79425.1| putative peptide chain release factor H [Escherichia coli MS 57-2]
          Length = 204

 Score = 47.5 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|312964708|ref|ZP_07778959.1| putative peptide chain release factor H [Escherichia coli 2362-75]
 gi|312290729|gb|EFR18607.1| putative peptide chain release factor H [Escherichia coli 2362-75]
          Length = 204

 Score = 47.5 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + AA +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|94263448|ref|ZP_01287261.1| ABC transporter related [delta proteobacterium MLMS-1]
 gi|93456178|gb|EAT06317.1| ABC transporter related [delta proteobacterium MLMS-1]
          Length = 682

 Score = 47.5 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 4/60 (6%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHT 64
           +  L+ R A +E ++++  + +    + +L++EYA +   + S    +DQ +QE + L T
Sbjct: 622 VDKLEGRKAALEKQLADPETYNRQDQFTELSKEYAEVQRRLESLYEQWDQLQQELETLQT 681


>gi|290475750|ref|YP_003468639.1| putative peptide chain release factor [Xenorhabdus bovienii
           SS-2004]
 gi|289175072|emb|CBJ81875.1| putative peptide chain release factor (modular protein)
           [Xenorhabdus bovienii SS-2004]
          Length = 205

 Score = 47.5 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 80/201 (39%), Gaps = 11/201 (5%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L+I A  G  E AL V          A      V +L   S       + ++  I G 
Sbjct: 2   ILLQISAAQGPDECALAVRKALERLIDEADELGIMVNILEKESGRRSRTLRSVMVAIQGE 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
                 +   G  +                   VA      +    I   +IR +T+RAS
Sbjct: 62  NEQQFFERWDGTIKWICASPWRKGDGRKNWFIGVA----QFKPLQQIMESEIRFETLRAS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN T+SA+R  HI +GI V   SE+SQH NR  A  +L  RL   +    A  +
Sbjct: 118 GPGGQHVNKTESAIRAVHIASGISVKVQSERSQHANRRLACLLLEHRLQQQQDMHQAQLK 177

Query: 290 SANR--KLQIGSGDRSERIRT 308
           +  R    QI   +R   +RT
Sbjct: 178 AERRLFHNQI---ERGNPVRT 195


>gi|170684096|ref|YP_001742396.1| peptide chain release factor-like protein [Escherichia coli
           SMS-3-5]
 gi|170521814|gb|ACB19992.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
          Length = 204

 Score = 47.5 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 11/201 (5%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY--KEIVATISG 169
            +L++ +  G  E  L V        + A  +      ++  + + G Y      A IS 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQ---DVAITVLETEAGRYPDTMRSALISL 58

Query: 170 RGVFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            G  +    ES    +Q +                 +         D     + IR +T+
Sbjct: 59  DGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETL 114

Query: 228 RASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
           R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  + 
Sbjct: 115 RSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSA 174

Query: 288 ERSANRKLQIGSGDRSERIRT 308
              + R++     +R    RT
Sbjct: 175 ALKSQRRMFHHQIERGNPRRT 195


>gi|213610056|ref|ZP_03369882.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|322614608|gb|EFY11537.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620127|gb|EFY16999.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623421|gb|EFY20260.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629281|gb|EFY26060.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322632001|gb|EFY28755.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637261|gb|EFY33963.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642458|gb|EFY39060.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646289|gb|EFY42803.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652443|gb|EFY48797.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322653395|gb|EFY49728.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322660457|gb|EFY56693.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664609|gb|EFY60802.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669338|gb|EFY65488.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670884|gb|EFY67017.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322678877|gb|EFY74932.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322681906|gb|EFY77931.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322688032|gb|EFY83998.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323194387|gb|EFZ79582.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197802|gb|EFZ82934.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203402|gb|EFZ88427.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323206853|gb|EFZ91806.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210378|gb|EFZ95270.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214620|gb|EFZ99371.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323223176|gb|EGA07519.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224853|gb|EGA09116.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230057|gb|EGA14177.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233795|gb|EGA17884.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238511|gb|EGA22569.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244199|gb|EGA28208.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246359|gb|EGA30342.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251985|gb|EGA35848.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257982|gb|EGA41661.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323259921|gb|EGA43552.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265065|gb|EGA48564.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272628|gb|EGA56035.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  +  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEQMQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|324114895|gb|EGC08861.1| RF-1 domain-containing protein [Escherichia fergusonii B253]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + I  +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIHYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +R+  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQRQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|197248567|ref|YP_002145297.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|204927397|ref|ZP_03218599.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|197212270|gb|ACH49667.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|204324062|gb|EDZ09257.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  +  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEQMQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|323976247|gb|EGB71340.1| RF-1 domain-containing protein [Escherichia coli TW10509]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V     R+ +  A        + + +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + I  +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTSDEQEQSDAIHYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +R+  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQRQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|16759310|ref|NP_454927.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16763697|ref|NP_459312.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142917|ref|NP_806259.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|62178886|ref|YP_215303.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161615515|ref|YP_001589480.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167993332|ref|ZP_02574427.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168232270|ref|ZP_02657328.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168465389|ref|ZP_02699271.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168819094|ref|ZP_02831094.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194443695|ref|YP_002039557.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194472201|ref|ZP_03078185.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|198241865|ref|YP_002214270.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389746|ref|ZP_03216357.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207855800|ref|YP_002242451.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213025683|ref|ZP_03340130.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213161389|ref|ZP_03347099.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213416713|ref|ZP_03349857.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213425142|ref|ZP_03357892.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213649630|ref|ZP_03379683.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213852433|ref|ZP_03381965.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|224582156|ref|YP_002635954.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|289826861|ref|ZP_06545771.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25513287|pir||AI0542 probable peptide chain release factor prfH [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16418816|gb|AAL19271.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501601|emb|CAD08785.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138549|gb|AAO70119.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62126519|gb|AAX64222.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364879|gb|ABX68647.1| hypothetical protein SPAB_03287 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402358|gb|ACF62580.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194458565|gb|EDX47404.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|195631774|gb|EDX50294.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197936381|gb|ACH73714.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602191|gb|EDZ00737.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205328589|gb|EDZ15353.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333479|gb|EDZ20243.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205344152|gb|EDZ30916.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|206707603|emb|CAR31885.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224466683|gb|ACN44513.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245540|emb|CBG23335.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992008|gb|ACY86893.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301156930|emb|CBW16412.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911285|dbj|BAJ35259.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320084570|emb|CBY94362.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224975|gb|EFX50036.1| Peptide chain release protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322713338|gb|EFZ04909.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323128632|gb|ADX16062.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622014|gb|EGE28359.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|332987265|gb|AEF06248.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|326789649|ref|YP_004307470.1| peptide chain release factor H [Clostridium lentocellum DSM 5427]
 gi|326540413|gb|ADZ82272.1| peptide chain release factor H [Clostridium lentocellum DSM 5427]
          Length = 195

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 10/121 (8%)

Query: 188 VPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT 247
                A+ +       V++L E  ++  +     IR +T R+ G GGQHVN  ++ VR  
Sbjct: 69  ESPYRANCKRKNWYIDVSILEEVKKVSTEEI---IRFETFRSGGKGGQHVNKVETGVRAI 125

Query: 248 HIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERI 306
           H+PTGI +V++  +SQH N+  AM  L   L  V       E+      Q+   +++  I
Sbjct: 126 HMPTGIAVVSTEARSQHMNKQIAMNRLLDLLAQVNEDANQKEK------QLAWLEQNRLI 179

Query: 307 R 307
           R
Sbjct: 180 R 180


>gi|167553099|ref|ZP_02346849.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205322360|gb|EDZ10199.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|56414557|ref|YP_151632.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363487|ref|YP_002143124.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56128814|gb|AAV78320.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094964|emb|CAR60501.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN +DSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKSDSAVRATHLASGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|331645440|ref|ZP_08346544.1| putative peptide chain release factor H [Escherichia coli M605]
 gi|331045602|gb|EGI17728.1| putative peptide chain release factor H [Escherichia coli M605]
          Length = 232

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 30  ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 89

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + I  +T+R+S
Sbjct: 90  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIHYETLRSS 145

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 146 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 205

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 206 SQRRMFHHQIERGNPRRT 223


>gi|300934927|ref|ZP_07149981.1| putative peptide chain release factor H [Escherichia coli MS 21-1]
 gi|300459833|gb|EFK23326.1| putative peptide chain release factor H [Escherichia coli MS 21-1]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|323965216|gb|EGB60674.1| RF-1 domain-containing protein [Escherichia coli M863]
 gi|327254578|gb|EGE66194.1| putative peptide chain release factor H [Escherichia coli STEC_7v]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V     R+ +  A        + + +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + I  +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIHYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +R+  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGIRVKVQSERSQHANKRLARLLIAWKLEQQRQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|149197057|ref|ZP_01874109.1| peptide chain release factor-like protein [Lentisphaera araneosa
           HTCC2155]
 gi|149139603|gb|EDM28004.1| peptide chain release factor-like protein [Lentisphaera araneosa
           HTCC2155]
          Length = 203

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 79/184 (42%), Gaps = 4/184 (2%)

Query: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSD-NDDGGYKEIVATISGRGV 172
           ++  +G G  E    +  +F+++ R A     + E++ +   ++   ++ ++ ++ G  +
Sbjct: 5   IQFSSGQGPRECERVLWHIFKIFCREAEDENIQCELIKAEKGSEKNSFRSLLISLEGNQL 64

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGS 232
            +  K   G    +         +       V     A     ++ L  I+ +  R SG 
Sbjct: 65  ETLRKNWEGSLLWRAPSPFRPHHKRRNWF--VQASFFAIPAKAELDLSQIKFEAQRGSGP 122

Query: 233 GGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
           GGQHVN   +A+R  + P  + +  + E+SQ++N++ AM  +   L     ++   E  A
Sbjct: 123 GGQHVNKCATAIRAYYAPLQLSILCNEERSQYRNKMLAMARVLEALNLHHSQKEGEESKA 182

Query: 292 NRKL 295
            R+ 
Sbjct: 183 QRQK 186


>gi|197287314|ref|YP_002153186.1| peptide chain release factor [Proteus mirabilis HI4320]
 gi|194684801|emb|CAR46873.1| probable peptide chain release factor [Proteus mirabilis HI4320]
          Length = 203

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 5/182 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L+  +  G  E  + V      +      R+    ++   +    G K ++ ++ G  
Sbjct: 1   MLLQFSSAQGPEECCIAVEKTLNYFLTVTEQRQ-VDVIILEQEPSRYGLKSVLVSLKGAE 59

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
             +  +  SG  + Q         +       +A      +   +I   +I  +TMRA+G
Sbjct: 60  AKAIAQQWSGTVQWQCTSTLRPKHKRKNWFIGIA----YFDPPQEIQDTEILFETMRANG 115

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
            GGQHVN T SAVR THI TGI V    +       +  K L A        +     + 
Sbjct: 116 PGGQHVNKTSSAVRATHIATGISVKIQSQRIQHANKKLAKQLIAWHLTHYLSQQQASFNN 175

Query: 292 NR 293
            R
Sbjct: 176 QR 177


>gi|209917447|ref|YP_002291531.1| peptide chain release factor-like protein [Escherichia coli SE11]
 gi|209910706|dbj|BAG75780.1| peptide chain release factor [Escherichia coli SE11]
          Length = 202

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 5/197 (2%)

Query: 113 ILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
           +L++ +  G  E  L V     R+ +  A        + + +       +  + ++ G  
Sbjct: 1   MLQLSSAQGPEECCLAVKKALERLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGDN 60

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
            ++  +   G  +                   +         D     + IR +T+R+SG
Sbjct: 61  AWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSSG 116

Query: 232 SGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA 291
            GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    +
Sbjct: 117 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLKS 176

Query: 292 NRKLQIGSGDRSERIRT 308
            R++     +R    RT
Sbjct: 177 QRRMFHHQIERGNPRRT 193


>gi|330910076|gb|EGH38586.1| hypothetical protein ECAA86_00359 [Escherichia coli AA86]
          Length = 204

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + I  +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIHYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|260853488|ref|YP_003227379.1| putative peptide chain release factor RF-1 [Escherichia coli
           O26:H11 str. 11368]
 gi|260866434|ref|YP_003232836.1| putative peptide chain release factor RF-1 [Escherichia coli
           O111:H- str. 11128]
 gi|257752137|dbj|BAI23639.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O26:H11 str. 11368]
 gi|257762790|dbj|BAI34285.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O111:H- str. 11128]
 gi|323178470|gb|EFZ64048.1| putative peptide chain release factor H [Escherichia coli 1180]
          Length = 204

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V     R+ +  A        + + + +     +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGHYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SLRRMFHHQIERGNPRRT 195


>gi|56551079|ref|YP_161918.1| putative ABC transporter ATP-binding protein [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|241761349|ref|ZP_04759437.1| ABC transporter related protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753262|ref|YP_003226155.1| ABC transporter ATP-binding protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56542653|gb|AAV88807.1| ABC transporter related protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374256|gb|EER63753.1| ABC transporter related protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258552625|gb|ACV75571.1| ABC transporter related [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 560

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I DL +RF EI   M++ P+   +  L  E   +   I  +  +     + +     +  
Sbjct: 99  IADLVDRFNEISTLMADPPADADFDALMTEMGELQERIDTVDGW-TLDNQLEIAMEALRC 157

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELEN 95
              D+++  L+  E   +      LE 
Sbjct: 158 PPGDADVTKLSGGERRRVALCRLLLEK 184


>gi|256020250|ref|ZP_05434115.1| peptide chain release factor-like protein [Shigella sp. D9]
 gi|332281412|ref|ZP_08393825.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
 gi|323181570|gb|EFZ66990.1| putative peptide chain release factor H [Escherichia coli 1357]
 gi|332103764|gb|EGJ07110.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
          Length = 204

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V     R+ +  A        + + +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         +     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTANEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|302761410|ref|XP_002964127.1| hypothetical protein SELMODRAFT_405812 [Selaginella moellendorffii]
 gi|300167856|gb|EFJ34460.1| hypothetical protein SELMODRAFT_405812 [Selaginella moellendorffii]
          Length = 388

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 18/41 (43%)

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
            D R N     +  ++ G ++ ++   L + Q+    S +E
Sbjct: 66  KDLRTNAETSDISVIMGGNLEPLLTAYLMSKQSSASASGAE 106


>gi|293418352|ref|ZP_06660787.1| peptide chain release factor H [Escherichia coli B088]
 gi|291324880|gb|EFE64295.1| peptide chain release factor H [Escherichia coli B088]
 gi|323945388|gb|EGB41442.1| RF-1 domain-containing protein [Escherichia coli H120]
 gi|324115579|gb|EGC09518.1| RF-1 domain-containing protein [Escherichia coli E1167]
          Length = 204

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + AA +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|157156041|ref|YP_001461424.1| peptide chain release factor-like protein [Escherichia coli
           E24377A]
 gi|187732116|ref|YP_001879031.1| peptide chain release factor-like protein [Shigella boydii CDC
           3083-94]
 gi|300817246|ref|ZP_07097464.1| putative peptide chain release factor H [Escherichia coli MS 107-1]
 gi|300823448|ref|ZP_07103578.1| putative peptide chain release factor H [Escherichia coli MS 119-7]
 gi|307313497|ref|ZP_07593118.1| peptide chain release factor H [Escherichia coli W]
 gi|309797856|ref|ZP_07692238.1| putative peptide chain release factor H [Escherichia coli MS 145-7]
 gi|331666568|ref|ZP_08367442.1| putative peptide chain release factor H [Escherichia coli TA271]
 gi|157078071|gb|ABV17779.1| putative peptide chain release factor H [Escherichia coli E24377A]
 gi|187429108|gb|ACD08382.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC
           3083-94]
 gi|300524066|gb|EFK45135.1| putative peptide chain release factor H [Escherichia coli MS 119-7]
 gi|300530222|gb|EFK51284.1| putative peptide chain release factor H [Escherichia coli MS 107-1]
 gi|306906665|gb|EFN37176.1| peptide chain release factor H [Escherichia coli W]
 gi|308118540|gb|EFO55802.1| putative peptide chain release factor H [Escherichia coli MS 145-7]
 gi|320176701|gb|EFW51738.1| peptide chain release factor-like protein [Shigella dysenteriae CDC
           74-1112]
 gi|320185048|gb|EFW59829.1| peptide chain release factor-like protein [Shigella flexneri CDC
           796-83]
 gi|323379877|gb|ADX52145.1| peptide chain release factor H [Escherichia coli KO11]
 gi|331065792|gb|EGI37676.1| putative peptide chain release factor H [Escherichia coli TA271]
          Length = 204

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + AA +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|331675918|ref|ZP_08376635.1| putative peptide chain release factor H [Escherichia coli H591]
 gi|331076478|gb|EGI47755.1| putative peptide chain release factor H [Escherichia coli H591]
          Length = 232

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V     R+ +  A        + + +       +  + ++ G 
Sbjct: 30  ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 89

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 90  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 145

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 146 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 205

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 206 SQRRMFHHQIERGNPRRT 223


>gi|331671827|ref|ZP_08372623.1| putative peptide chain release factor H [Escherichia coli TA280]
 gi|331070816|gb|EGI42175.1| putative peptide chain release factor H [Escherichia coli TA280]
          Length = 232

 Score = 46.3 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 11/187 (5%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 30  ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 89

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 90  SAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 145

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN TDSAVR TH+ +GI V   SE+SQH N     K L   L   + ++   E 
Sbjct: 146 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHAN-----KRLARLLIAWKLEQQQQEN 200

Query: 290 SANRKLQ 296
           SA  K Q
Sbjct: 201 SAALKSQ 207


>gi|68061541|ref|XP_672770.1| peptide release factor [Plasmodium berghei strain ANKA]
 gi|56490109|emb|CAI01539.1| peptide release factor, putative [Plasmodium berghei]
          Length = 210

 Score = 46.3 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 13/194 (6%)

Query: 40  AAISPIISKISIYDQKKQEEQDLHTVIGDH---------NSDSEIRDLAQIEVLAIEKEI 90
             +     ++ IY Q   E   L     +          N  SE++++        +  +
Sbjct: 9   KQLKIAWEELDIYKQLLTENMKLTLRKAEESEQIDTINFNEYSEVKEINYNIENICDSIV 68

Query: 91  RELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVL 150
           ++L +     +      D     LEI  G GG EA +F  +LF MYE +  L+ ++  + 
Sbjct: 69  KQLLDIYTNFVNFNHHLDSNEVRLEIVPGVGGQEAKMFANELFSMYEHFCKLKNYECLIK 128

Query: 151 SSSDNDD--GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLP 208
           ++   ++  G YK IVA I G GV+     E G+HRVQR+P    S ++ TS + V +  
Sbjct: 129 NNKLCEEGKGIYKNIVAYIKGEGVYVDFIQEIGIHRVQRIPI--NSKKMQTSTSIVLLFD 186

Query: 209 EAAEIDVDIPLEDI 222
           E    +       I
Sbjct: 187 EKQTKEKLEKKMKI 200


>gi|157159718|ref|YP_001457036.1| peptide chain release factor-like protein [Escherichia coli HS]
 gi|191165713|ref|ZP_03027552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|300921975|ref|ZP_07138121.1| putative peptide chain release factor H [Escherichia coli MS 182-1]
 gi|301325442|ref|ZP_07218928.1| putative peptide chain release factor H [Escherichia coli MS 78-1]
 gi|157065398|gb|ABV04653.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
 gi|190904220|gb|EDV63930.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|300421645|gb|EFK04956.1| putative peptide chain release factor H [Escherichia coli MS 182-1]
 gi|300847740|gb|EFK75500.1| putative peptide chain release factor H [Escherichia coli MS 78-1]
 gi|320201148|gb|EFW75731.1| peptide chain release factor-like protein [Escherichia coli
           EC4100B]
 gi|323169568|gb|EFZ55240.1| putative peptide chain release factor H [Shigella sonnei 53G]
 gi|324019875|gb|EGB89094.1| putative peptide chain release factor H [Escherichia coli MS 117-3]
          Length = 204

 Score = 46.3 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V     R+ +  A        + + +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALERLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|193063214|ref|ZP_03044305.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|194427638|ref|ZP_03060186.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|260842481|ref|YP_003220259.1| putative peptide chain release factor RF-1 [Escherichia coli
           O103:H2 str. 12009]
 gi|192931122|gb|EDV83725.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|194414408|gb|EDX30682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|257757628|dbj|BAI29125.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O103:H2 str. 12009]
          Length = 204

 Score = 46.3 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + AA +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGAIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|168240054|ref|ZP_02664986.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194449085|ref|YP_002044299.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197263075|ref|ZP_03163149.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|194407389|gb|ACF67608.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197241330|gb|EDY23950.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205339954|gb|EDZ26718.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 204

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLVSGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|194432592|ref|ZP_03064878.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|194419153|gb|EDX35236.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|320178936|gb|EFW53898.1| peptide chain release factor-like protein [Shigella boydii ATCC
           9905]
 gi|332085764|gb|EGI90928.1| putative peptide chain release factor H [Shigella dysenteriae
           155-74]
 gi|332094999|gb|EGJ00038.1| putative peptide chain release factor H [Shigella boydii 5216-82]
          Length = 204

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 112 CILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V     R+ +  A        + + +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +       +   D     IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADEQGQSDA----IRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS 290
           G GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++  +    
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 177

Query: 291 ANRKLQIGSGDRSERIRT 308
           + R++     +R    RT
Sbjct: 178 SQRRMFHHQIERGNPRRT 195


>gi|323938779|gb|EGB35025.1| RF-1 domain-containing protein [Escherichia coli E1520]
          Length = 185

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 32  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 87

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + +R +T+R+SG GGQHVN TDSAVR TH+ TGI V    +       R  ++L A   +
Sbjct: 88  DAVRYETLRSSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQHANKRLARLLIAWRLE 147

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 148 QQQQENSAALKSQRRMIHHQIERGNPRRT 176


>gi|168238579|ref|ZP_02663637.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194735122|ref|YP_002113341.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|194710624|gb|ACF89845.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288612|gb|EDY27989.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 204

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  +  ++I  +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEQMQSDEIHFETLRSSGPGGQHVNKTDSAVRATHLASGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|104779685|ref|YP_606183.1| peptide chain release factor-like protein [Pseudomonas entomophila
           L48]
 gi|95108672|emb|CAK13366.1| putative peptide chain release factor [Pseudomonas entomophila L48]
          Length = 206

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 82/226 (36%), Gaps = 30/226 (13%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGY-KEIVATISGR 170
            +L++ A  G  E AL V       +  A  +   V +L        G  + ++  + G 
Sbjct: 2   ILLQLSAAQGPDECALAVAKALLRLQAEADAQAVAVRILEEEPGPRRGTLRSVLLALDGE 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
                    +G  +                    A     A         +I  +T+R+S
Sbjct: 62  QAERLADHWTGSLQWTCSSPYRPGHARKNWFFGGARFAPPAPELA----SEIHFETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVNTTDSAVR TH+ +G+ V   SE+SQH N+  A+ ++  RL     +  +  R
Sbjct: 118 GPGGQHVNTTDSAVRATHLASGVSVKVQSERSQHANKRLALLLIGQRLAQQAEQVDSELR 177

Query: 290 SANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGY 335
           +  R                 F       HRI         V +G 
Sbjct: 178 AERR----------------LFH------HRI--ERGNPRRVFRGE 199


>gi|215485384|ref|YP_002327815.1| peptide chain release factor-like protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|215263456|emb|CAS07777.1| predicted peptide chain release factor [Escherichia coli O127:H6
           str. E2348/69]
          Length = 193

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 11/187 (5%)

Query: 112 CILEIRAGTGGSEAALFVGDLF-RMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V     R+ +  A        + + +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + IR +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIRYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN TDSAVR TH+ +GI V   SE+SQH N     K L   L   + ++   E 
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHAN-----KRLARLLIAWKLEQQQQEN 172

Query: 290 SANRKLQ 296
           SA  K Q
Sbjct: 173 SAALKSQ 179


>gi|313111591|ref|ZP_07797390.1| putative peptide chain release factor [Pseudomonas aeruginosa
           39016]
 gi|310883892|gb|EFQ42486.1| putative peptide chain release factor [Pseudomonas aeruginosa
           39016]
          Length = 204

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 79/204 (38%), Gaps = 15/204 (7%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L++ A  G +E  L V   F      AA    +VEV+     +       +       
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 61

Query: 172 VFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
               +        +Q +      A                           +IR +T+R+
Sbjct: 62  AAEALAERWCGG-IQWICPSPYRARHARKNWFIGAE----RLAAPPASLEGEIRFETLRS 116

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQHVNTTDSAVR TH+ +GI V   S++SQH N+  A+ ++  RL D         
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 289 RSANRKLQ--IGSGD-----RSER 305
           R+  R+    I  G      R ER
Sbjct: 177 RAERRRAHGRISRGAARRVFRGER 200


>gi|224092502|ref|XP_002309637.1| predicted protein [Populus trichocarpa]
 gi|222855613|gb|EEE93160.1| predicted protein [Populus trichocarpa]
          Length = 669

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDLH 63
           + KQ+ +L  R+ E+E +     S   +  L +E+ ++    + +     Q  +E+ ++ 
Sbjct: 495 TRKQLEELSKRYEELEAK-----SKADFKFLAKEFKSLKSSQTTLKQELSQSLKEKSEVE 549

Query: 64  TVIGDHNSDSEIR 76
            ++ +     E  
Sbjct: 550 KLLYEEREMKEHE 562


>gi|325498389|gb|EGC96248.1| prfH [Escherichia fergusonii ECD227]
          Length = 204

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 11/187 (5%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVATISGR 170
            +L++ +  G  E  L V        + A  +   V VL   +       +  + ++ G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
             ++  +   G  +                   +         D     + I  +T+R+S
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQSDAIHYETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVN TDSAVR TH+ +GI V   SE+SQH N     K L   L   + ++   E 
Sbjct: 118 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHAN-----KRLARLLIAWKLEQQQQEN 172

Query: 290 SANRKLQ 296
           SA  K Q
Sbjct: 173 SAALKSQ 179


>gi|212697039|ref|ZP_03305167.1| hypothetical protein ANHYDRO_01604 [Anaerococcus hydrogenalis DSM
          7454]
 gi|212675814|gb|EEB35421.1| hypothetical protein ANHYDRO_01604 [Anaerococcus hydrogenalis DSM
          7454]
          Length = 115

 Score = 46.0 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 22/68 (32%)

Query: 10 CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           +L      IE    +    D   K  E  A +S        +   K+E +D   +I   
Sbjct: 28 DNLFKEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFINLKEELEDQSDLIDII 87

Query: 70 NSDSEIRD 77
             +E  D
Sbjct: 88 EETNEELD 95


>gi|238913295|ref|ZP_04657132.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
          Length = 204

 Score = 46.0 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       +       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYIGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSERR 181


>gi|323943355|gb|EGB39508.1| RF-1 domain-containing protein [Escherichia coli E482]
          Length = 185

 Score = 46.0 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 32  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 87

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 88  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 147

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 148 QQQQENSAALKSQRRMFHHQIERGNPRRT 176


>gi|300947294|ref|ZP_07161497.1| putative peptide chain release factor H [Escherichia coli MS 116-1]
 gi|300955685|ref|ZP_07168035.1| putative peptide chain release factor H [Escherichia coli MS 175-1]
 gi|301643547|ref|ZP_07243589.1| putative peptide chain release factor H [Escherichia coli MS 146-1]
 gi|260450569|gb|ACX40991.1| peptide chain release factor H [Escherichia coli DH1]
 gi|300317436|gb|EFJ67220.1| putative peptide chain release factor H [Escherichia coli MS 175-1]
 gi|300453095|gb|EFK16715.1| putative peptide chain release factor H [Escherichia coli MS 116-1]
 gi|301078047|gb|EFK92853.1| putative peptide chain release factor H [Escherichia coli MS 146-1]
          Length = 178

 Score = 46.0 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 25  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 80

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 81  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 140

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 141 QQQQENSAALKSQRRMFHHQIERGNPRRT 169


>gi|218894572|ref|YP_002443442.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           LESB58]
 gi|218774801|emb|CAW30619.1| probable peptide chain release factor [Pseudomonas aeruginosa
           LESB58]
          Length = 204

 Score = 46.0 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 81/203 (39%), Gaps = 13/203 (6%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT-ISGR 170
            +L++ A  G +E  L V   F      AA    +VEVL     +       +   + G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVLEEVTGERPRTWRSLLLGLRGI 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
              +  +   G  +        A                           +IR +T+R+S
Sbjct: 62  AAEALAEHWCGGIQWICTSPYRARHARKNWFIGAE----RFAAPPASLEGEIRFETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVNTTDSAVR TH+ +GI V   S++SQH N+  A+ ++  RL D         R
Sbjct: 118 GPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADALR 177

Query: 290 SANRKLQ--IGSGD-----RSER 305
           +  R+    I  G      R ER
Sbjct: 178 AERRQAHGRISRGAARRVFRGER 200


>gi|323963546|gb|EGB59104.1| RF-1 domain-containing protein [Escherichia coli H489]
          Length = 185

 Score = 46.0 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 32  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEKEQS 87

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 88  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 147

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 148 QQQQENSAALKSQRRMFHHQIERGNPRRT 176


>gi|300929514|ref|ZP_07144981.1| putative peptide chain release factor H [Escherichia coli MS 187-1]
 gi|300462556|gb|EFK26049.1| putative peptide chain release factor H [Escherichia coli MS 187-1]
 gi|323972417|gb|EGB67624.1| RF-1 domain-containing protein [Escherichia coli TA007]
          Length = 178

 Score = 46.0 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 25  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEKEQS 80

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 81  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 140

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 141 QQQQENSAALKSQRRMFHHQIERGNPRRT 169


>gi|183600289|ref|ZP_02961782.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
 gi|188020079|gb|EDU58119.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
          Length = 202

 Score = 46.0 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 6/177 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L+  +  G  E  + V      +   A  R+  +     +     G K  +  + G G
Sbjct: 1   MLLQFSSAQGPEECCIAVEKALACFFIEAKKRE-VMVNTLETVASKHGLKSALVALEGHG 59

Query: 172 VFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
                +  SG  + Q         +       V            I   DI  + ++A G
Sbjct: 60  AEELAQLWSGTIQWQCQSPLRPKHKRKNWFINV----IRFSPIQTIEESDIEFEFIKAQG 115

Query: 232 SGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMAN 287
            GGQHVN T SAVR  H+ TGI V   SE+SQH N+  A +++  RL + + ++ + 
Sbjct: 116 PGGQHVNKTCSAVRAKHLATGISVKVQSERSQHANKKLAKQLIYWRLNEYQDQQASA 172


>gi|15799941|ref|NP_285953.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           EDL933]
 gi|15829517|ref|NP_308290.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. Sakai]
 gi|82775830|ref|YP_402177.1| peptide chain release factor-like protein [Shigella dysenteriae
           Sd197]
 gi|168750219|ref|ZP_02775241.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4113]
 gi|168757264|ref|ZP_02782271.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4401]
 gi|168763477|ref|ZP_02788484.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4501]
 gi|168770034|ref|ZP_02795041.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4486]
 gi|168776124|ref|ZP_02801131.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4196]
 gi|168782997|ref|ZP_02808004.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4076]
 gi|168789709|ref|ZP_02814716.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC869]
 gi|168800326|ref|ZP_02825333.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC508]
 gi|195938639|ref|ZP_03084021.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208806453|ref|ZP_03248790.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4206]
 gi|208812358|ref|ZP_03253687.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4045]
 gi|208821267|ref|ZP_03261587.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4042]
 gi|209398288|ref|YP_002268863.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4115]
 gi|217325768|ref|ZP_03441852.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. TW14588]
 gi|254791396|ref|YP_003076233.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261223709|ref|ZP_05937990.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261255882|ref|ZP_05948415.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|291281080|ref|YP_003497898.1| putative peptide chain release factor [Escherichia coli O55:H7 str.
           CB9615]
 gi|309786024|ref|ZP_07680653.1| putative peptide chain release factor H [Shigella dysenteriae 1617]
 gi|12513007|gb|AAG54561.1|AE005201_14 probable peptide chain release factor [Escherichia coli O157:H7
           str. EDL933]
 gi|13359720|dbj|BAB33686.1| probable peptide chain release factor [Escherichia coli O157:H7
           str. Sakai]
 gi|81239978|gb|ABB60688.1| probable peptide chain release factor [Shigella dysenteriae Sd197]
 gi|187768441|gb|EDU32285.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4196]
 gi|188015585|gb|EDU53707.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4113]
 gi|188999642|gb|EDU68628.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4076]
 gi|189355734|gb|EDU74153.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4401]
 gi|189361064|gb|EDU79483.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4486]
 gi|189366361|gb|EDU84777.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4501]
 gi|189370775|gb|EDU89191.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC869]
 gi|189377360|gb|EDU95776.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC508]
 gi|208726254|gb|EDZ75855.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4206]
 gi|208733635|gb|EDZ82322.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4045]
 gi|208741390|gb|EDZ89072.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4042]
 gi|209159688|gb|ACI37121.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4115]
 gi|209745314|gb|ACI70964.1| probable peptide chain release factor [Escherichia coli]
 gi|209745316|gb|ACI70965.1| probable peptide chain release factor [Escherichia coli]
 gi|209745318|gb|ACI70966.1| probable peptide chain release factor [Escherichia coli]
 gi|209745320|gb|ACI70967.1| probable peptide chain release factor [Escherichia coli]
 gi|209745322|gb|ACI70968.1| probable peptide chain release factor [Escherichia coli]
 gi|217321989|gb|EEC30413.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. TW14588]
 gi|254590796|gb|ACT70157.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. TW14359]
 gi|290760953|gb|ADD54914.1| Probable peptide chain release factor [Escherichia coli O55:H7 str.
           CB9615]
 gi|308926135|gb|EFP71613.1| putative peptide chain release factor H [Shigella dysenteriae 1617]
 gi|320190210|gb|EFW64860.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320638171|gb|EFX07920.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. G5101]
 gi|320643253|gb|EFX12452.1| peptide chain release factor-like protein [Escherichia coli O157:H-
           str. 493-89]
 gi|320648900|gb|EFX17518.1| peptide chain release factor-like protein [Escherichia coli O157:H-
           str. H 2687]
 gi|320660248|gb|EFX27758.1| peptide chain release factor-like protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320665014|gb|EFX32124.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. LSU-61]
 gi|326338757|gb|EGD62576.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. 1044]
 gi|326342456|gb|EGD66236.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. 1125]
          Length = 166

 Score = 46.0 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +   +               +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R SG GGQHVN TDSAVR TH+ TGI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRPSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|218703550|ref|YP_002411069.1| peptide chain release factor-like protein [Escherichia coli UMN026]
 gi|218430647|emb|CAR11515.1| putative peptide chain release factor [Escherichia coli UMN026]
          Length = 166

 Score = 45.6 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAALKSQRRMFHHQIERGNPRRT 157


>gi|15600663|ref|NP_254157.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           PAO1]
 gi|254237846|ref|ZP_04931169.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719]
 gi|254243022|ref|ZP_04936344.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192]
 gi|9951802|gb|AAG08855.1|AE004959_11 probable peptide chain release factor [Pseudomonas aeruginosa PAO1]
 gi|126169777|gb|EAZ55288.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719]
 gi|126196400|gb|EAZ60463.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192]
          Length = 204

 Score = 45.6 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 79/204 (38%), Gaps = 15/204 (7%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L++ A  G +E  L V   F      AA    +VEV+     +       +       
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 61

Query: 172 VFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
               +        +Q +      A                           +IR +T+R+
Sbjct: 62  AAEALAERWCGG-IQWICPSPYRARHARKNWFIGAE----RFAAPPASLEGEIRFETLRS 116

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQHVNTTDSAVR TH+ +GI V   S++SQH N+  A+ ++  RL D         
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 289 RSANRKLQ--IGSGD-----RSER 305
           R+  R+    I  G      R ER
Sbjct: 177 RAERRRAHGRISRGAARRVFRGER 200


>gi|116053620|ref|YP_793947.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115588841|gb|ABJ14856.1| putative peptide chain release factor [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 204

 Score = 45.6 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 81/203 (39%), Gaps = 13/203 (6%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT-ISGR 170
            +L++ A  G +E  L V   F      AA    +VEVL     +       +   + G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVLEEVAGERPRTWRSLLLGLRGI 61

Query: 171 GVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
              +  +   G  +        A                           +IR +T+R+S
Sbjct: 62  AAEALAEHWCGGIQWICTSPYRARHARKNWFIGAE----RFAAPPASLEGEIRFETLRSS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANER 289
           G GGQHVNTTDSAVR TH+ +GI V   S++SQH N+  A+ ++  RL D         R
Sbjct: 118 GPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADALR 177

Query: 290 SANRKLQ--IGSGD-----RSER 305
           +  R+    I  G      R ER
Sbjct: 178 AERRQAHGRISRGAARRVFRGER 200


>gi|107104573|ref|ZP_01368491.1| hypothetical protein PaerPA_01005652 [Pseudomonas aeruginosa PACS2]
          Length = 207

 Score = 45.6 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 79/204 (38%), Gaps = 15/204 (7%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L++ A  G +E  L V   F      AA    +VEV+     +       +       
Sbjct: 5   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 64

Query: 172 VFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
               +        +Q +      A                           +IR +T+R+
Sbjct: 65  AAEALAERWCGG-IQWICPSPYRARHARKNWFIGAE----RFAAPPASLEGEIRFETLRS 119

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQHVNTTDSAVR TH+ +GI V   S++SQH N+  A+ ++  RL D         
Sbjct: 120 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 179

Query: 289 RSANRKLQ--IGSGD-----RSER 305
           R+  R+    I  G      R ER
Sbjct: 180 RAERRRAHGRISRGAARRVFRGER 203


>gi|320654680|gb|EFX22681.1| peptide chain release factor-like protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
          Length = 166

 Score = 45.6 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +   +               +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R SG GGQHVN TD AVR TH+ TGI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRPSGPGGQHVNKTDLAVRATHLATGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|169838093|ref|ZP_02871281.1| hypothetical protein cdivTM_13518 [candidate division TM7
           single-cell isolate TM7a]
          Length = 38

 Score = 45.6 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 23/34 (67%)

Query: 323 LTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSAS 356
           +TL++LE +L G +D++I+ L+   QA+++    
Sbjct: 1   MTLHRLEGILDGDLDEMIDALIAYEQAELLKEVG 34


>gi|162138281|ref|YP_668200.2| peptide chain release factor-like protein [Escherichia coli 536]
          Length = 166

 Score = 45.6 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAALKSQRRMFHHQIERGNPRRT 157


>gi|332829815|gb|EGK02457.1| peptide chain release factor H [Dysgonomonas gadei ATCC BAA-286]
          Length = 207

 Score = 45.6 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 70/188 (37%), Gaps = 4/188 (2%)

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVAT 166
             +    L+I +G G +E    V          A      VEV+     +          
Sbjct: 1   MRNCKIYLQITSGRGPAECGRVVALTVEKILTQAKKIGLDVEVVEREPGEINRTLFSAVI 60

Query: 167 -ISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRID 225
            I G      ++   G  +           +       V       + +VD         
Sbjct: 61  SIEGLKADEIVREWEGTIQWIAQSPYRIYHKRKNWFVGVRSFTIPDKHNVDEREISY--Q 118

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           T+RASG GGQHVN T+SAVR THI +G  +  S ++SQ QN+  A++ L  +L     ++
Sbjct: 119 TLRASGPGGQHVNKTESAVRATHISSGLSVTASDQRSQLQNKKLAVERLLIKLAAWNMEQ 178

Query: 285 MANERSAN 292
              +   N
Sbjct: 179 NMQKAQEN 186


>gi|60679074|gb|AAX33818.1| putative peptide chain release factor 2 [Campylobacter jejuni
           subsp. jejuni]
          Length = 40

 Score = 45.2 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 311 FSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
           F   ++ D+R      +++ +L G I  +I  +L A +A+
Sbjct: 1   FPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALKAE 40


>gi|89107109|ref|AP_000889.1| predicted peptide chain release factor [Escherichia coli str. K-12
           substr. W3110]
 gi|256024120|ref|ZP_05437985.1| peptide chain release factor-like protein [Escherichia sp. 4_1_40B]
 gi|307136901|ref|ZP_07496257.1| peptide chain release factor-like protein [Escherichia coli H736]
 gi|331640765|ref|ZP_08341900.1| putative peptide chain release factor H [Escherichia coli H736]
 gi|115311624|sp|P28369|RFH_ECOLI RecName: Full=Putative peptide chain release factor homolog;
           Short=RF-H
 gi|1552804|gb|AAB08656.1| PrfH [Escherichia coli]
 gi|85674391|dbj|BAA77905.2| predicted peptide chain release factor [Escherichia coli str. K12
           substr. W3110]
 gi|315134921|dbj|BAJ42080.1| peptide chain release factor 2 [Escherichia coli DH1]
 gi|315616801|gb|EFU97418.1| putative peptide chain release factor H [Escherichia coli 3431]
 gi|331037563|gb|EGI09783.1| putative peptide chain release factor H [Escherichia coli H736]
          Length = 166

 Score = 45.2 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAALKSQRRMFHHQIERGNPRRT 157


>gi|161486311|ref|NP_752319.2| peptide chain release factor-like protein [Escherichia coli CFT073]
 gi|162138491|ref|YP_539310.2| peptide chain release factor-like protein [Escherichia coli UTI89]
 gi|218557192|ref|YP_002390105.1| peptide chain release factor-like protein [Escherichia coli S88]
 gi|218688128|ref|YP_002396340.1| peptide chain release factor-like protein [Escherichia coli ED1a]
 gi|218363961|emb|CAR01626.1| putative peptide chain release factor [Escherichia coli S88]
 gi|218425692|emb|CAR06484.1| putative peptide chain release factor [Escherichia coli ED1a]
          Length = 166

 Score = 45.2 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAALKSQRRMFHHQIERGNPRRT 157


>gi|331651168|ref|ZP_08352193.1| putative peptide chain release factor H [Escherichia coli M718]
 gi|331050909|gb|EGI22961.1| putative peptide chain release factor H [Escherichia coli M718]
          Length = 166

 Score = 45.2 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETQRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAALKSQRRMFHHQIERGNPRRT 157


>gi|194438235|ref|ZP_03070327.1| putative peptide chain release factor H [Escherichia coli 101-1]
 gi|253774739|ref|YP_003037570.1| peptide chain release factor-like protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160350|ref|YP_003043458.1| peptide chain release factor-like protein [Escherichia coli B str.
           REL606]
 gi|297520538|ref|ZP_06938924.1| peptide chain release factor-like protein [Escherichia coli OP50]
 gi|312970362|ref|ZP_07784543.1| putative peptide chain release factor H [Escherichia coli 1827-70]
 gi|194422899|gb|EDX38894.1| putative peptide chain release factor H [Escherichia coli 101-1]
 gi|242376066|emb|CAQ30751.1| prfH [Escherichia coli BL21(DE3)]
 gi|253325783|gb|ACT30385.1| peptide chain release factor H [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972251|gb|ACT37922.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|253976460|gb|ACT42130.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
 gi|310337011|gb|EFQ02149.1| putative peptide chain release factor H [Escherichia coli 1827-70]
 gi|332341589|gb|AEE54923.1| peptide chain release factor-like protein PrfH [Escherichia coli
           UMNK88]
          Length = 166

 Score = 45.2 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEKEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAALKSQRRMFHHQIERGNPRRT 157


>gi|168261270|ref|ZP_02683243.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205349709|gb|EDZ36340.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 204

 Score = 45.2 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLVSGISV 142

Query: 256 -TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR 293
              SE+SQH N+  A  ++  RL    +   A  +S  R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNECAVLKSERR 181


>gi|298345317|ref|YP_003718004.1| ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC
           43063]
 gi|298235378|gb|ADI66510.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 43063]
          Length = 560

 Score = 45.2 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R+ EI  +M++  +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IKSKLDRYNEISAQMADPDA--DFDALMEEMGQLQEAIDAADAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIR 76
             +D++++
Sbjct: 153 PPADADVK 160


>gi|148988471|ref|ZP_01819918.1| peptide chain release factor 1 [Streptococcus pneumoniae
          SP6-BS73]
 gi|147926152|gb|EDK77226.1| peptide chain release factor 1 [Streptococcus pneumoniae
          SP6-BS73]
          Length = 67

 Score = 45.2 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 3  FLSHKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQE 58
             + Q+  +++R+ E+   +S+   V     +++L++E A+    +     Y Q  Q 
Sbjct: 1  MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQN 59


>gi|302791615|ref|XP_002977574.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii]
 gi|300154944|gb|EFJ21578.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii]
          Length = 207

 Score = 44.8 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 192 EASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPT 251
           E  G V +++A  ++          +     ++DT RA+G GGQH N T+SAVR+ H+PT
Sbjct: 21  EGDGDVESNSAATSIAYLRMSERDLV--AQCKMDTFRATGPGGQHRNKTESAVRLKHLPT 78

Query: 252 GIM-VTSSEKSQHQNRLRAMKVLRARL 277
           G++   S ++SQH+NR  A++ LR  +
Sbjct: 79  GLVSQASEDRSQHRNRDSAVQRLRHTI 105


>gi|315656349|ref|ZP_07909238.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|315492908|gb|EFU82510.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 560

 Score = 44.8 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R+ EI  +M++  +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IKAKLDRYNEISAQMADPDA--DFDALMEEMGQLQEAIDAADAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIR 76
             +D++++
Sbjct: 153 PPADADVK 160


>gi|169840002|ref|ZP_02873190.1| peptide chain release factor 2 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 86

 Score = 44.8 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 211 AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRA 269
              +V+I  +D+RID  R+ G GGQ VNTTDSAVRITH+PTGI V   +E+SQ QN+  A
Sbjct: 1   TTDEVNINDKDLRIDVYRSGGRGGQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETA 60

Query: 270 MKVLRARLYDVERKRMANERSANR 293
           +K+LR++L  ++ ++ A   +  R
Sbjct: 61  LKILRSKLAQIQTEQHAETINDLR 84


>gi|315655737|ref|ZP_07908635.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 51333]
 gi|315489801|gb|EFU79428.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 51333]
          Length = 560

 Score = 44.8 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R+ EI  +M++  +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IKAKLDRYNEISAQMADPDA--DFDALMEEMGQLQEAIDAADAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIR 76
             +D++++
Sbjct: 153 PPADADVK 160


>gi|304390874|ref|ZP_07372826.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304325757|gb|EFL93003.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 560

 Score = 44.8 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R+ EI  +M++  +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IKAKLDRYNEISAQMADPDA--DFDALMEEMGQLQEAIDAADAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIR 76
             +D++++
Sbjct: 153 PPADADVK 160


>gi|296392334|ref|ZP_06881809.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           PAb1]
          Length = 204

 Score = 44.8 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 79/204 (38%), Gaps = 15/204 (7%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L++ A  G +E  L V   F      AA    +VEV+     +       +       
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERSRTWRSLLLGLRGT 61

Query: 172 VFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
               +        +Q +      A                           +IR +T+R+
Sbjct: 62  AAEALAERWCGG-IQWICPSPYRARHARKNWFIGAE----RFAAPPASLEGEIRFETLRS 116

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANE 288
           SG GGQHVNTTDSAVR TH+ +GI V   S++SQH N+  A+ ++  RL D         
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 289 RSANRKLQ--IGSGD-----RSER 305
           R+  R+    I  G      R ER
Sbjct: 177 RAERRQAHGRISRGAARRVFRGER 200


>gi|218550059|ref|YP_002383850.1| peptide chain release factor-like protein [Escherichia fergusonii
           ATCC 35469]
 gi|218357600|emb|CAQ90239.1| putative peptide chain release factor [Escherichia fergusonii ATCC
           35469]
          Length = 166

 Score = 44.8 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 10/138 (7%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY 278
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V   SE+SQH N     K L   L 
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHAN-----KRLARLLI 123

Query: 279 DVERKRMANERSANRKLQ 296
             + ++   E SA  K Q
Sbjct: 124 AWKLEQQQQENSAALKSQ 141


>gi|218698820|ref|YP_002406449.1| peptide chain release factor-like protein [Escherichia coli IAI39]
 gi|218368806|emb|CAR16554.1| putative peptide chain release factor [Escherichia coli IAI39]
          Length = 166

 Score = 44.8 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAALKSQRRMFHHQIERGNPRRT 157


>gi|322693735|gb|EFY85585.1| myosin class II heavy chain [Metarhizium acridum CQMa 102]
          Length = 2258

 Score = 44.8 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  +Q+   + R  E+E  +S+S   DA  K+++        IS +      +    D
Sbjct: 1987 IMVLQEQLQAREQRIEELEQSLSKSD-PDAAAKISKR----DDEISWLRELLAVR--HSD 2039

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
            L  +I   + D   RD  +   + +   ++  E E  
Sbjct: 2040 LQDIISALSGDHYDRDTVKDAAIRLRANLQMEEQERE 2076


>gi|77415301|ref|ZP_00791262.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|77158648|gb|EAO69998.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
          Length = 53

 Score = 44.4 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 15 RFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
          R+ E+   +S+   V     +++L+ E A     ++    Y Q      D   
Sbjct: 1  RYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVISNISDAEE 53


>gi|74310877|ref|YP_309296.1| peptide chain release factor-like protein [Shigella sonnei Ss046]
 gi|82542839|ref|YP_406786.1| peptide chain release factor-like protein [Shigella boydii Sb227]
 gi|188494291|ref|ZP_03001561.1| putative peptide chain release factor H [Escherichia coli 53638]
 gi|73854354|gb|AAZ87061.1| probable peptide chain release factor [Shigella sonnei Ss046]
 gi|81244250|gb|ABB64958.1| probable peptide chain release factor [Shigella boydii Sb227]
 gi|188489490|gb|EDU64593.1| putative peptide chain release factor H [Escherichia coli 53638]
 gi|323171088|gb|EFZ56737.1| putative peptide chain release factor H [Escherichia coli LT-68]
 gi|332098554|gb|EGJ03520.1| putative peptide chain release factor H [Shigella boydii 3594-74]
          Length = 166

 Score = 44.4 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|218693719|ref|YP_002401386.1| peptide chain release factor-like protein [Escherichia coli 55989]
 gi|218350451|emb|CAU96139.1| putative peptide chain release factor [Escherichia coli 55989]
          Length = 166

 Score = 44.4 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|322712149|gb|EFZ03722.1| myosin class II heavy chain (MHC), putative [Metarhizium anisopliae
            ARSEF 23]
          Length = 2286

 Score = 44.4 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  +Q+   + R  E+E  +S+S   DA  K+++        IS +      +    D
Sbjct: 2015 IMVLQEQLQAREQRIEELEQSLSKSD-PDAAAKISKR----DDEISWLRELLAVR--HSD 2067

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
            L  +I   + D   RD  +   + +   ++  E E  
Sbjct: 2068 LQDIISALSGDHYDRDTIKDAAIRLRANLQMEEQERE 2104


>gi|297183730|gb|ADI19854.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_46D07]
          Length = 90

 Score = 44.4 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 35/84 (41%), Positives = 53/84 (63%)

Query: 75  IRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFR 134
                + +++  + ++   ++ +  LLLPKD DD ++ ILE+RAGTGG EAALF  +LF 
Sbjct: 5   CWKWRRPKLIFXKAQLPFAKDALQLLLLPKDKDDSRNAILEVRAGTGGDEAALFASNLFS 64

Query: 135 MYERYAALRKWKVEVLSSSDNDDG 158
           MY+R+AA   WK EV+  S+   G
Sbjct: 65  MYQRFAAKHGWKFEVMEVSETGIG 88


>gi|218552840|ref|YP_002385753.1| peptide chain release factor-like protein [Escherichia coli IAI1]
 gi|218359608|emb|CAQ97149.1| putative peptide chain release factor [Escherichia coli IAI1]
          Length = 166

 Score = 44.4 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|207093409|ref|ZP_03241196.1| peptide chain release factor 2 [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 111

 Score = 44.4 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 10 CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +K     IE    +       +K     +E   ++ ++           E  +L  + 
Sbjct: 27 EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELA 86

Query: 67 GDHNSD 72
           + N +
Sbjct: 87 QNDNDE 92


>gi|205351639|ref|YP_002225440.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205271420|emb|CAR36228.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326626670|gb|EGE33013.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 204

 Score = 44.4 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 53/112 (47%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLVSGISV 142

Query: 256 TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
               +       R  ++L A   + +R+       + R+L     +R   +R
Sbjct: 143 KVQSERSQHANKRLARLLIAWRLEQQRQNGCAALKSERRLFHHQIERGNPLR 194


>gi|323160301|gb|EFZ46254.1| putative peptide chain release factor H [Escherichia coli E128010]
          Length = 166

 Score = 44.0 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGAIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|302866524|ref|YP_003835161.1| peptide chain release factor H [Micromonospora aurantiaca ATCC
           27029]
 gi|315502934|ref|YP_004081821.1| peptide chain release factor h [Micromonospora sp. L5]
 gi|302569383|gb|ADL45585.1| peptide chain release factor H [Micromonospora aurantiaca ATCC
           27029]
 gi|315409553|gb|ADU07670.1| peptide chain release factor H [Micromonospora sp. L5]
          Length = 201

 Score = 44.0 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 6/161 (3%)

Query: 122 GSEAALFVGDLFRMYERY---AALRKWKVEVLSSSDNDDGG-YKEIVATISGRGVFSRMK 177
           G   A     L R+  R    AA R  + E + +   D  G Y+ ++  I+G G  +   
Sbjct: 9   GRGPAECAWALARLLSRLEGEAARRGLRTERVETVPGDRAGTYRSVLVRITGAGAEAFAA 68

Query: 178 FESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHV 237
             +G    Q                T         +       D+     R  G GGQH 
Sbjct: 69  GWTGTLCWQAPSPYRTGHGRKNWYVTARTCRTDVVVTP-FHEADVEFVPCRTGGPGGQHR 127

Query: 238 NTTDSAVRITHIPT-GIMVTSSEKSQHQNRLRAMKVLRARL 277
           N   +AVR TH P+   +V  +E+  H NR  A+++LR R+
Sbjct: 128 NKASTAVRATHRPSGRTVVVDTERHLHLNRRIAVELLRQRI 168


>gi|326387500|ref|ZP_08209109.1| putative ABC transporter ATP-binding protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208156|gb|EGD58964.1| putative ABC transporter ATP-binding protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 559

 Score = 44.0 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + DL +RF EI   M++ P    +  L EE   +   I  +  +     + +     +  
Sbjct: 99  VADLVDRFNEISNIMADPPEDADFDALMEEMGELQGKIDAVDGW-TLDNQLEIAMEALRC 157

Query: 69  HNSD 72
             SD
Sbjct: 158 PPSD 161


>gi|323158080|gb|EFZ44179.1| putative peptide chain release factor H [Escherichia coli EPECa14]
          Length = 166

 Score = 44.0 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYD 279
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   +
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLE 128

Query: 280 VERKRMANERSANRKLQIGSGDRSERIRT 308
            +++  +    + R++     +R    RT
Sbjct: 129 QQQQENSAVLKSLRRMFHHQIERGNPRRT 157


>gi|313668005|ref|YP_004048289.1| hypothetical protein NLA_6650 [Neisseria lactamica ST-640]
 gi|313005467|emb|CBN86902.1| hypothetical membrane protein [Neisseria lactamica 020-06]
          Length = 997

 Score = 44.0 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 45/118 (38%), Gaps = 1/118 (0%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHTV 65
           K++ +     AE+   ++ES   +   +L ++  ++   I SK    ++ K++ + +  +
Sbjct: 443 KKLDEENKELAELNKELAESGENEKRKELEKKVKSLEYKIQSKKRQIERLKEDIERVAVL 502

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +     E  D       ++  +  +    +      + T  + S + E+    G  
Sbjct: 503 EEEIKRSEEFFDENGWIKDSVIDDKTKNTVNLKMSNGARWTVTNDSMLKELDLSEGAQ 560


>gi|332185094|ref|ZP_08386843.1| ABC transporter family protein [Sphingomonas sp. S17]
 gi|332014818|gb|EGI56874.1| ABC transporter family protein [Sphingomonas sp. S17]
          Length = 559

 Score = 44.0 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 1/87 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I DL +RF  I   M +      +  L EE   +   I  +  +     + +     +  
Sbjct: 99  IADLVDRFNAISAEMGDPKDDTDFDALMEEMGELQAKIDAVDGW-SLDSQLEQAMEALRC 157

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELEN 95
              D+++  L+  E   +      LE 
Sbjct: 158 PPGDADVTRLSGGEKRRVALCKLLLEK 184


>gi|302786792|ref|XP_002975167.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii]
 gi|300157326|gb|EFJ23952.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii]
          Length = 411

 Score = 44.0 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 203 TVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKS 261
           + A       +     +   ++DT RA+G GGQH N T+SAVR+ H+PTG++   S ++S
Sbjct: 30  SAATSIAYLRMSERDLVAQCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRS 89

Query: 262 QHQNRLRAMKVLRARL 277
           QH+NR  A++ LR  +
Sbjct: 90  QHRNRESAVQRLRHTI 105


>gi|17548920|ref|NP_522260.1| peptide chain release factor-like protein [Ralstonia solanacearum
           GMI1000]
 gi|17431170|emb|CAD17850.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum GMI1000]
          Length = 207

 Score = 43.6 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 6/168 (3%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L+  +  G +E  L V       +R +AL   +VEVL   D +  G            
Sbjct: 2   ILLQFSSAQGPAECELAVLKGLACLQRESALAGVRVEVLEQEDGEHPGTLRSALVSLEGD 61

Query: 172 V-FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRAS 230
              +  +   G  +                   VA               +IR +T RAS
Sbjct: 62  AEAAVAQRWEGTIQWTCPSPYRPRHARKNWFFGVA----RCAAPAATLPSEIRFETARAS 117

Query: 231 GSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARL 277
           G GGQHVN T+SAVR  H+ TGI V   +E+SQH N+  A+ +L  +L
Sbjct: 118 GPGGQHVNKTESAVRAIHLATGISVKVQTERSQHANKRLAVLLLAHKL 165


>gi|297851766|ref|XP_002893764.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339606|gb|EFH70023.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 256

 Score = 43.6 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
           P   +   D  ++  R++T R SG GGQH N  DSAVR+ H+PTGI+     ++SQH+NR
Sbjct: 83  PNYLKFTDDELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNR 142

Query: 267 LRAMKVLRARLYDVERKRMANERSA 291
             A+  LR  L    R ++  E  A
Sbjct: 143 ASALNRLRTLLAIKVRNKVDLEAYA 167


>gi|281357476|ref|ZP_06243964.1| ABC transporter related protein [Victivallis vadensis ATCC BAA-548]
 gi|281316079|gb|EFB00105.1| ABC transporter related protein [Victivallis vadensis ATCC BAA-548]
          Length = 657

 Score = 43.6 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 9/66 (13%)

Query: 6   HKQICDLKNRFAEIEL-------RMSESPSVDAYIKLTEEYAAI-SPIISKISIYDQKKQ 57
            K++ +L++R  ++E        ++++  ++D +  L  E A I S I S  S +++  Q
Sbjct: 582 EKRVAELESRLEQLEKRQAGLLEQLADPGALD-FASLNRELAKIQSDITSTESEWEEAAQ 640

Query: 58  EEQDLH 63
           + +++ 
Sbjct: 641 KLEEIR 646


>gi|12322377|gb|AAG51209.1|AC051630_6 peptide chain release factor, putative; 8726-9996 [Arabidopsis
           thaliana]
          Length = 255

 Score = 43.6 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
           P   +   +  ++  R++T R SG GGQH N  DSAVR+ H+PTGI+     ++SQH+NR
Sbjct: 84  PNYLKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNR 143

Query: 267 LRAMKVLRARLYDVERKRMANERSA 291
             A+  LR  L    R ++  E  A
Sbjct: 144 ASALNRLRTLLAIKVRNKVDIEAYA 168


>gi|30692851|ref|NP_174601.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|12322576|gb|AAG51290.1|AC027035_13 unknown protein [Arabidopsis thaliana]
 gi|26450075|dbj|BAC42157.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|29824307|gb|AAP04114.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|332193463|gb|AEE31584.1| Class I peptide chain release factor [Arabidopsis thaliana]
          Length = 257

 Score = 43.6 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
           P   +   +  ++  R++T R SG GGQH N  DSAVR+ H+PTGI+     ++SQH+NR
Sbjct: 84  PNYLKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNR 143

Query: 267 LRAMKVLRARLYDVERKRMANERSA 291
             A+  LR  L    R ++  E  A
Sbjct: 144 ASALNRLRTLLAIKVRNKVDIEAYA 168


>gi|193216885|ref|YP_002000127.1| massive surface protein MspG [Mycoplasma arthritidis 158L3-1]
 gi|193002208|gb|ACF07423.1| massive surface protein MspG [Mycoplasma arthritidis 158L3-1]
          Length = 2711

 Score = 43.6 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 27/55 (49%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
            +Q+ ++K+   +++ ++S++ +     +LT+E   +  +  KI   +      +
Sbjct: 712 KEQLDNVKSELEDLKKKISDAYNAKNLEELTKELNKLEKLKEKIEDLETLATTIE 766


>gi|103486770|ref|YP_616331.1| putative ABC transporter ATP-binding protein [Sphingopyxis
           alaskensis RB2256]
 gi|98976847|gb|ABF52998.1| ABC transporter related [Sphingopyxis alaskensis RB2256]
          Length = 670

 Score = 43.3 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + D+ +RF EI   M++ P+   +  L EE   +   I  +  +     + +     +  
Sbjct: 210 VADMMDRFNEISALMADPPADADFDALMEEMGTLQEKIDAVDGW-TLDNQLEIAMEALRC 268

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELEN 95
              D  + +L+  E   I      LE 
Sbjct: 269 PPGDWSVENLSGGEKRRIALTRLLLEK 295


>gi|330467788|ref|YP_004405531.1| peptide chain release factor-like protein [Verrucosispora maris
           AB-18-032]
 gi|328810759|gb|AEB44931.1| peptide chain release factor-like protein [Verrucosispora maris
           AB-18-032]
          Length = 202

 Score = 43.3 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 66/189 (34%), Gaps = 3/189 (1%)

Query: 121 GGSEAALFV-GDLFRMYERYAALRKWKVEVLSSSDNDDGG-YKEIVATISGRGVFSRMKF 178
            G +   +    L R  E  AA ++ +V  + +   D  G Y+ ++  + G GV +    
Sbjct: 11  RGPQECAWALAHLLRRLEAEAARQRLRVHRVDTVAGDRPGTYRSVLVEVGGAGVEAFAAS 70

Query: 179 ESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVN 238
            +G    Q      A         T      A          D+ +   R  G GGQH N
Sbjct: 71  WTGTLCWQAPSPYRAGVGRKNWYVTAQ-PCPADPDATCFEESDVEVVACRTGGPGGQHRN 129

Query: 239 TTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIG 298
              +AVR TH PTG++V    + Q     R    L  +      +    + +  R     
Sbjct: 130 KVSTAVRATHRPTGLVVVVDTERQFSLNRRIALRLLRQRLANRDETAVRDATTARWQLHD 189

Query: 299 SGDRSERIR 307
              R + +R
Sbjct: 190 RLVRGDPVR 198


>gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
 gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
          Length = 190

 Score = 43.3 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 6/123 (4%)

Query: 164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIR 223
           +  I  +  F  +   +   R+ + P     G V    A+   L +       I   +I 
Sbjct: 1   MFKIYPQTPFRHISKRTAQWRLIQYP-----GHVRFFQASPLSLAKQMPPRPTIDDSEIT 55

Query: 224 IDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER 282
              ++ SG GGQ +N T SAV++ HIPT  +V   + +SQ QNR  A ++L  ++  +E+
Sbjct: 56  GTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRILAEKIELLEK 115

Query: 283 KRM 285
              
Sbjct: 116 GEQ 118


>gi|149369402|ref|ZP_01889254.1| putative peptide chain release factor [unidentified eubacterium
           SCB49]
 gi|149356829|gb|EDM45384.1| putative peptide chain release factor [unidentified eubacterium
           SCB49]
          Length = 238

 Score = 43.3 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 4/191 (2%)

Query: 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLS-SSDNDDGGYKEIVA 165
           +   + I++I AG G +E    V    +   +         E++S  +  ++   + +  
Sbjct: 6   NKMNTQIIQITAGRGPAECCWVVAQTLKFLIKELTATNITYEIISKENGFENRTIQSVTL 65

Query: 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRID 225
            + G+ + + +    G  +           +       +A         +++ L ++   
Sbjct: 66  QLKGKQLDTFLANWLGTIQWVGTSTFRKHHKRKNWF--IACFKVEETNKLELVLNEVSFQ 123

Query: 226 TMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAMKVLRARLYDVERKR 284
            MR+SG GGQHVN   SA+R TH  +G  +V    +SQHQNR  A+K L+ ++ +  R  
Sbjct: 124 AMRSSGPGGQHVNKVSSAIRATHKKSGLQVVAMDSRSQHQNRKIAIKRLQEKVSNFNRNT 183

Query: 285 MANERSANRKL 295
           + N      + 
Sbjct: 184 LQNSVDDQWRN 194


>gi|218779987|ref|YP_002431305.1| ABC transporter [Desulfatibacillum alkenivorans AK-01]
 gi|218761371|gb|ACL03837.1| ABC transporter related [Desulfatibacillum alkenivorans AK-01]
          Length = 666

 Score = 42.9 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISP-IISKISIYDQKKQEEQD 61
            K+I  L+ R AEI   +++        K   L EEY  +   + + ++ ++  ++  ++
Sbjct: 596 EKKISKLEAREAEISELLADPDVFSDSEKSQPLLEEYQKVKDGLDNLMTAWEADQEAIEE 655

Query: 62  LHTVIGDHNS 71
           L   +     
Sbjct: 656 LEAQLQAELD 665


>gi|283457901|ref|YP_003362502.1| ABC transporter ATPase [Rothia mucilaginosa DY-18]
 gi|283133917|dbj|BAI64682.1| ATPase component of ABC transporter [Rothia mucilaginosa DY-18]
          Length = 559

 Score = 42.9 bits (99), Expect = 0.081,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M+E  +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IKSKLDRFNEISALMAEPDA--DFDALMEEMGQLQEAIDAANAWD-LDSQLEQAMEALRC 152

Query: 69  HNSD 72
             +D
Sbjct: 153 PPAD 156


>gi|255326601|ref|ZP_05367678.1| ABC transporter, ATP-binding protein [Rothia mucilaginosa ATCC
           25296]
 gi|255296341|gb|EET75681.1| ABC transporter, ATP-binding protein [Rothia mucilaginosa ATCC
           25296]
          Length = 559

 Score = 42.9 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M+E  +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IKSKLDRFNEISALMAEPDA--DFDALMEEMGQLQEAIDAANAWD-LDSQLEQAMEALRC 152

Query: 69  HNSD 72
             +D
Sbjct: 153 PPAD 156


>gi|325295640|ref|YP_004282154.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325066088|gb|ADY74095.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 875

 Score = 42.5 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K++ D++    ++E ++S    +    K  + +    +  +        +  Q+ + L 
Sbjct: 817 KKLKDIEKDIQKLERKLSNENFLKKAPKNVVEKNRKELEELKEVSEKLARTLQQLKHLQ 875


>gi|227875984|ref|ZP_03994107.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus mulieris ATCC 35243]
 gi|269977110|ref|ZP_06184084.1| ATP-binding component of an ABC transporter [Mobiluncus mulieris
           28-1]
 gi|306819265|ref|ZP_07452976.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus mulieris ATCC 35239]
 gi|307700131|ref|ZP_07637177.1| ATP-binding cassette protein, ChvD family [Mobiluncus mulieris
           FB024-16]
 gi|227843516|gb|EEJ53702.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus mulieris ATCC 35243]
 gi|269934941|gb|EEZ91501.1| ATP-binding component of an ABC transporter [Mobiluncus mulieris
           28-1]
 gi|304648047|gb|EFM45361.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus mulieris ATCC 35239]
 gi|307614680|gb|EFN93903.1| ATP-binding cassette protein, ChvD family [Mobiluncus mulieris
           FB024-16]
          Length = 560

 Score = 42.5 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   MSE  +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IKAKLDRFNEISTLMSEPDA--DFDALMEEMGKLQEEIDAANAWD-LDNQLEQAMDALRC 152

Query: 69  HNSDSEIRD 77
              D+E+++
Sbjct: 153 PPPDAEVKN 161


>gi|289616588|emb|CBI56753.1| unnamed protein product [Sordaria macrospora]
          Length = 2267

 Score = 42.5 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 7/116 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  +Q+   ++R  E+E ++ +    DA IK+++        I+ +      +    D
Sbjct: 1937 IMVLQEQLQAREHRIEELEQQLEKVD-PDADIKISKR----DDEITWLRELLAVR--HSD 1989

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
            L  +IG  +SD   +D  +   + ++  ++  E E    +      +  +    IR
Sbjct: 1990 LQDIIGALSSDDYDQDAVRDAAIRLKANLQMEEQERERAMNGGSAINLPNIAATIR 2045


>gi|225629578|ref|ZP_03787603.1| Protein chain release factor B [Wolbachia endosymbiont of
          Muscidifurax uniraptor]
 gi|225591567|gb|EEH12582.1| Protein chain release factor B [Wolbachia endosymbiont of
          Muscidifurax uniraptor]
          Length = 69

 Score = 42.1 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%)

Query: 15 RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSE 74
          R  E++ + S         K  E     S I + +  + + + +  D  +++     +++
Sbjct: 2  RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 75 IR 76
            
Sbjct: 62 EE 63


>gi|295396672|ref|ZP_06806819.1| ABC superfamily ATP binding cassette transporter [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294970481|gb|EFG46409.1| ABC superfamily ATP binding cassette transporter [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 560

 Score = 42.1 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +  +R+ EI   MS   +   +  L EE   +   I     +D    +       +  
Sbjct: 96  IKEKLDRYNEISNEMSNPDA--DFDALMEEMGKLQEEIDAADAWD-LDSQLDQAMDALRC 152

Query: 69  HNSDSEIR 76
              D+++R
Sbjct: 153 PPGDADVR 160


>gi|296775803|gb|ADH43058.1| hypothetical protein [uncultured SAR11 cluster alpha
          proteobacterium H17925_48B19]
          Length = 52

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 3  FLSHKQICDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAISPIISKISIY 52
           +   ++ DL  + +++E  +S       ++ + ++EY+ +S II +   Y
Sbjct: 1  MVPLSKVQDLIVKHSKLEKELSSQEIDKKSFAEKSKEYSDLSDIIKEAISY 51


>gi|212224573|ref|YP_002307809.1| chromosome segregation protein [Thermococcus onnurineus NA1]
 gi|212009530|gb|ACJ16912.1| DNA double-strand break repair ATPase [Thermococcus onnurineus NA1]
          Length = 884

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 1/136 (0%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +  K++  ++ + AE+E  + E        +L E+ + + P   +       + E +   
Sbjct: 562 VLEKKLKSIEEKLAELENELGELGF-SDIKELDEKLSELEPAYRRYLELKGAESELEREK 620

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +     + E          +  +E+R+  NE   L  P++    +     +R    G 
Sbjct: 621 KRLKRTEEELEETREKLQGEFSSLEELRKRLNEKEKLYSPEEHAGIRERFTSLREELAGK 680

Query: 124 EAALFVGDLFRMYERY 139
            A L   +  R     
Sbjct: 681 RAQLEALEKKREETME 696


>gi|300741679|ref|ZP_07071700.1| ABC transporter, ATP-binding protein [Rothia dentocariosa M567]
 gi|300380864|gb|EFJ77426.1| ABC transporter, ATP-binding protein [Rothia dentocariosa M567]
          Length = 559

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M+E  +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IKAKLDRFNEISALMAEPDA--DFDALMEEMGKLQEAIDAANAWD-LDSQLEQAMEALRC 152

Query: 69  HNSD 72
             +D
Sbjct: 153 PPAD 156


>gi|213865384|ref|ZP_03387503.1| peptide chain release factor 1 [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 55

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 8  QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIY 52
          ++  L  R  E++  + ++ ++     +  L+ EYA +S +    + +
Sbjct: 8  KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDW 55


>gi|311113782|ref|YP_003985004.1| ABC transporter ATP-binding protein [Rothia dentocariosa ATCC
           17931]
 gi|310945276|gb|ADP41570.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Rothia dentocariosa ATCC 17931]
          Length = 559

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M+E  +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IKAKLDRFNEISALMAEPDA--DFDALMEEMGKLQEAIDAANAWD-LDSQLEQAMEALRC 152

Query: 69  HNSDS 73
             +D+
Sbjct: 153 PPADA 157


>gi|293413513|ref|ZP_06656162.1| hypothetical protein ECDG_00053 [Escherichia coli B185]
 gi|291433571|gb|EFF06544.1| hypothetical protein ECDG_00053 [Escherichia coli B185]
          Length = 122

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/84 (34%), Positives = 45/84 (53%)

Query: 225 DTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKR 284
           DT+R+SG GGQHVN TDSAVR TH+ +GI V    +       R  ++L A   + +++ 
Sbjct: 30  DTLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 89

Query: 285 MANERSANRKLQIGSGDRSERIRT 308
            +    + R++     +R    RT
Sbjct: 90  NSAALKSQRRMFHHQIERGNPRRT 113


>gi|227497421|ref|ZP_03927653.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Actinomyces urogenitalis DSM 15434]
 gi|226833097|gb|EEH65480.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Actinomyces urogenitalis DSM 15434]
          Length = 560

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI  +M++  +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IKGKLDRFNEISAQMADPDA--DFDALMEEMGKLQTEIDAANAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIRD 77
              D+E++ 
Sbjct: 153 PPPDAEVKH 161


>gi|307946015|ref|ZP_07661350.1| holdfast attachment protein C [Roseibium sp. TrichSKD4]
 gi|307769679|gb|EFO28905.1| holdfast attachment protein C [Roseibium sp. TrichSKD4]
          Length = 605

 Score = 42.1 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7   KQICDLKNRFAEIELRMSESP----SVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
            QI  L+ +  +++  M++      + D + KL+   A I+ +  +    +++  E + L
Sbjct: 543 DQIEALEAKLEKLQAEMNDPNLYAKNPDKFAKLS---AQITDVTEQKGALEEQWLELEML 599

Query: 63  HTVIG 67
           +  + 
Sbjct: 600 NEEMN 604


>gi|193216477|ref|YP_001999719.1| massive surface protein MspA [Mycoplasma arthritidis 158L3-1]
 gi|193001800|gb|ACF07015.1| massive surface protein MspA [Mycoplasma arthritidis 158L3-1]
          Length = 2336

 Score = 42.1 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 26/55 (47%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
            +Q+ + K+   +++ ++S++ +     +LT+E   +  +  KI   +      +
Sbjct: 712 KEQLDNAKSELEDLKKKISDAYNAKNLEELTKELNKLEKLKEKIEDLETLATTIE 766


>gi|224127830|ref|XP_002329188.1| predicted protein [Populus trichocarpa]
 gi|222870969|gb|EEF08100.1| predicted protein [Populus trichocarpa]
          Length = 257

 Score = 41.7 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
              E+  D  +    +DT +ASG GGQH N  +SAVR+ H+PTGI+     ++SQH NR 
Sbjct: 89  NYLELTDDELMRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHMNRA 148

Query: 268 RAMKVLRARL 277
            A+K LRA L
Sbjct: 149 SALKRLRALL 158


>gi|168701291|ref|ZP_02733568.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246]
          Length = 185

 Score = 41.7 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 212 EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTG-IMVTSSEKSQHQNRLRAM 270
            +  D  L    +DT RASG GGQ  N T SAVR+ H PTG I++    +SQH+N+ +A+
Sbjct: 18  HLTEDQLLRQCEVDTYRASGPGGQKRNKTSSAVRLRHAPTGLIVIAEESRSQHENKAKAL 77

Query: 271 KVLRARLY 278
           K L   L+
Sbjct: 78  KRLWHALF 85


>gi|254572770|ref|XP_002493494.1| Essential protein involved in intracellular protein transport
           [Pichia pastoris GS115]
 gi|238033293|emb|CAY71315.1| Essential protein involved in intracellular protein transport
           [Pichia pastoris GS115]
 gi|328354682|emb|CCA41079.1| Intracellular protein transport protein USO1 [Pichia pastoris CBS
           7435]
          Length = 1404

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/119 (10%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYDQKKQEE 59
           L  ++   LK++F+ ++ + +E    ++   L +E++ +    +     +   +Q  ++ 
Sbjct: 762 LLEEEYESLKSKFSNVDTKFAE--VWNSNESLEKEHSELLVSFNECKKTLQELEQTSKQL 819

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            +  T + +  S+ +   + ++            E +       K     ++ +  +  
Sbjct: 820 AEAKTKLEEEKSE-DYEQIKKMAKNLFTIGKENEEYKKIKKEQEKLDKKHEAELDTLHK 877


>gi|207110569|ref|ZP_03244731.1| peptide chain release factor 1 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 54

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 2  VFLSHKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAISPIISKISIY 52
          + +  +++  +  R+ E+   +S +  +    K   L++E ++I  I      Y
Sbjct: 1  MSILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEY 54


>gi|256824744|ref|YP_003148704.1| ABC transporter ATP-binding protein [Kytococcus sedentarius DSM
           20547]
 gi|256688137|gb|ACV05939.1| ATPase component of ABC transporters with duplicated ATPase domain
           [Kytococcus sedentarius DSM 20547]
          Length = 560

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           QI    +R+ EI   M++  +   +  L EE   +   I     +D    + +     + 
Sbjct: 95  QIKADLDRYNEISAEMADPDA--DFDALMEEMGKLQEKIDNADAWD-LDSQLEQAMDALR 151

Query: 68  DHNSDS 73
              +D 
Sbjct: 152 CPPADE 157


>gi|224143168|ref|XP_002324868.1| predicted protein [Populus trichocarpa]
 gi|222866302|gb|EEF03433.1| predicted protein [Populus trichocarpa]
          Length = 713

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 6/68 (8%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDLHTVIG 67
           + DL  R+ E+E +     S      L +E+ ++    + +     Q  +E+ ++  ++ 
Sbjct: 520 LEDLSKRYEELEAK-----SKADIKFLAKEFKSLKNSQTTLKQELSQSLKEKSEVEKLLH 574

Query: 68  DHNSDSEI 75
           +     E 
Sbjct: 575 EEREMKEH 582


>gi|46446182|ref|YP_007547.1| putative peptide chain release factor 2 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399823|emb|CAF23272.1| putative peptide chain release factor 2 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 118

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%)

Query: 212 EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAM 270
               +  L + ++ T R+SGSGGQH+N T+SAVR+TH PTGI+V + + +SQ++N+   +
Sbjct: 9   PEQDEDLLAECQVQTFRSSGSGGQHINVTNSAVRLTHFPTGIVVSSQTFRSQYRNKQNCL 68

Query: 271 KVLRARLYDVERKRMA 286
             LR  +  +  ++  
Sbjct: 69  AKLRQTVEKLNYRQPK 84


>gi|326517198|dbj|BAJ99965.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 170

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 10/104 (9%)

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           +  D  +    + T ++SG GGQH N  +SAVR+ H PTGI+     ++SQH+NR  A+ 
Sbjct: 1   MTDDELMAQCDMGTFKSSGPGGQHRNKRESAVRLRHHPTGIVAQAVEDRSQHKNRSSALS 60

Query: 272 VLRARLYDVERKRMANERSANR---------KLQIGSGDRSERI 306
            LR  +    R+ +  +              K  I S D   +I
Sbjct: 61  RLRTLIALKVRRPINLDNYTPPVELLQILPLKSTIRSKDVGNQI 104


>gi|167590758|ref|ZP_02383146.1| peptide chain release factor-like protein [Burkholderia ubonensis
           Bu]
          Length = 177

 Score = 41.7 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 8/176 (4%)

Query: 112 CILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRG 171
            +L+I +  G +E  L      +  +  A   +  + VL     +  G    V      G
Sbjct: 1   MLLQISSAHGPAECQLAAAKALQRLQAEADACRVALTVLDLQPGERPGTVRSVLL-DLDG 59

Query: 172 VFSRMKFESGVHRVQRV--PATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRA 229
             +    +     +Q +                 V            +P   ++ + MRA
Sbjct: 60  ADAAALADRWAGTLQWICASPYRLRHPRKNWFVGV----TRCADAPPLPDGAVKFEAMRA 115

Query: 230 SGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKR 284
            G GGQHVN T SA+R TH+ TG  V   SE+SQH N+  A+++L ARL +   + 
Sbjct: 116 RGPGGQHVNKTSSAIRATHLATGTSVRVESERSQHANKRLALQLLHARLREQADRE 171


>gi|87200365|ref|YP_497622.1| putative ABC transporter ATP-binding protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87136046|gb|ABD26788.1| ABC transporter related protein [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 559

 Score = 41.7 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            DL +RF EI   M++ P    +  L EE   +   I  +  +     + +     +   
Sbjct: 100 ADLVDRFNEISNIMADPPEDVDFDALMEEMGELQGKIDAVDGW-TLDNQLEIAMEALRCP 158

Query: 70  NSD 72
             D
Sbjct: 159 PGD 161


>gi|86739856|ref|YP_480256.1| putative ABC transporter ATP-binding protein [Frankia sp. CcI3]
 gi|86566718|gb|ABD10527.1| ABC transporter related [Frankia sp. CcI3]
          Length = 560

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  +  R+ EI  +MS   +   +  L  E A +   I   + ++    +       +  
Sbjct: 96  IRRVLARYEEINEKMSAPDA--DFDSLLAEQAELIDKIEAANAWE-LDSQLDQAMDALRL 152

Query: 69  HNSDSE 74
              D++
Sbjct: 153 PPGDAD 158


>gi|184200739|ref|YP_001854946.1| putative ABC transporter ATP-binding protein [Kocuria rhizophila
           DC2201]
 gi|183580969|dbj|BAG29440.1| putative ABC transporter ATP-binding protein [Kocuria rhizophila
           DC2201]
          Length = 560

 Score = 41.3 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M+E  +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IKAKLDRFNEISAEMAEPDA--DFDALMEEMGKLQEEIDSANAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIR 76
              D++++
Sbjct: 153 PPPDADVK 160


>gi|302343659|ref|YP_003808188.1| class I peptide chain release factor [Desulfarculus baarsii DSM
           2075]
 gi|301640272|gb|ADK85594.1| Class I peptide chain release factor [Desulfarculus baarsii DSM
           2075]
          Length = 113

 Score = 41.3 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 211 AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSE-KSQHQNRLRA 269
                  P  ++  +  RASG GGQH N  ++ VR+TH+P+G++V+++E +S+ QNR  A
Sbjct: 1   MSKPSPPPEHELSWEYFRASGPGGQHRNKVETGVRLTHLPSGLVVSATERRSREQNRQAA 60

Query: 270 MKVLRARLYDVER 282
           ++ L  RL D  +
Sbjct: 61  LERLARRLADQAK 73


>gi|111221284|ref|YP_712078.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a]
 gi|111148816|emb|CAJ60494.1| putative transport protein (ABC superfamily, atp_bind) [Frankia
           alni ACN14a]
          Length = 560

 Score = 41.3 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  +  R+ EI  +MS   +   +  L  E A +   I   + ++    +       +  
Sbjct: 96  IRRVLARYEEINEKMSAPDA--DFDSLLTEQAELIDKIEAANAWE-LDSQLDQAMDALRL 152

Query: 69  HNSDSE 74
              D++
Sbjct: 153 PPGDAD 158


>gi|302918020|ref|XP_003052567.1| hypothetical protein NECHADRAFT_67284 [Nectria haematococca mpVI
            77-13-4]
 gi|256733507|gb|EEU46854.1| hypothetical protein NECHADRAFT_67284 [Nectria haematococca mpVI
            77-13-4]
          Length = 2011

 Score = 41.3 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  +Q+   + R  E+E  +S++   DA  K+T+        IS +      +   ++
Sbjct: 1747 IMVLQEQLQAREQRIEELEHSLSKAD-PDAASKITKR----DDEISWLRELLAVR--HEN 1799

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
            L  +I    SD   RD  +   + ++  ++  E E    + 
Sbjct: 1800 LQDIIAALQSDRFDRDAVKDAAIRLKANLQMEEQERERAMN 1840


>gi|213026528|ref|ZP_03340975.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 54

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/53 (64%), Positives = 42/53 (79%)

Query: 94  ENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWK 146
           E ++  LLLPKD DD+++  LE+RAGTGG EAALF GDLFRMY RYA  R+W+
Sbjct: 1   EQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWR 53


>gi|294011629|ref|YP_003545089.1| putative ABC-type transporter ATPase component [Sphingobium
           japonicum UT26S]
 gi|292674959|dbj|BAI96477.1| putative ABC-type transporter ATPase component [Sphingobium
           japonicum UT26S]
          Length = 561

 Score = 40.9 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I D  +RF EI L +++ P    +  L EE   +   I  +  +     + +     +  
Sbjct: 101 IADKLDRFNEISLELADPPEDVDFDALMEEMGTLQEQIDAVDGW-TLDNQLEIAMEALRC 159

Query: 69  HNSD 72
             SD
Sbjct: 160 PPSD 163


>gi|291236335|ref|XP_002738097.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 4080

 Score = 40.9 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/140 (10%), Positives = 48/140 (34%), Gaps = 9/140 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            K++ + + +  E          V+++ K  +E  ++  + S +      +++ +D    
Sbjct: 750 RKKVENFEAKLQEYNKE------VESFRK--KEIMSMDEMKSNVEQLSNIQKKLEDARDE 801

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN-YLLLPKDTDDDKSCILEIRAGTGGSE 124
           +   N + E+ +    +   ++   +        +    K   + +  +          +
Sbjct: 802 LESLNKEEELLEWEPTQFPILQYMFQLKAPYDQLWNTALKFHTNFEFWMNGPFLDLNAEQ 861

Query: 125 AALFVGDLFRMYERYAALRK 144
               VG+++R   + A    
Sbjct: 862 VEEEVGNMWRNMYKLAKSFN 881


>gi|319790640|ref|YP_004152273.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317115142|gb|ADU97632.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 879

 Score = 40.9 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEEQDL 62
            K++  +    A++E ++S    +    K  + +    +  +    S   Q  Q+ Q L
Sbjct: 820 KKKLEKMAKEIAKLEKKLSNENFLAKAPKEVVEKNRKELQELTQLHSKLTQTLQQLQKL 878


>gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica]
 gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica]
          Length = 154

 Score = 40.9 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
                   +   +IR   +R SG GGQ +N   +  +ITHIPTG++V +   +S  +NR 
Sbjct: 20  PQMPPRPKVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPTGLVVSSQKTRSLEENRK 79

Query: 268 RAMKVLRARLYDVERKRMANERSANRKLQIG 298
            A +     +   + ++M      +RK  +G
Sbjct: 80  IARQ-----ILADKLEQMFAPPGTSRKDVVG 105


>gi|154317864|ref|XP_001558251.1| hypothetical protein BC1G_02915 [Botryotinia fuckeliana B05.10]
 gi|150843573|gb|EDN18766.1| hypothetical protein BC1G_02915 [Botryotinia fuckeliana B05.10]
          Length = 1097

 Score = 40.9 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 44/142 (30%), Gaps = 6/142 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +S ++I  L+    E++  M+        + L      +  +   +    Q         
Sbjct: 287 VSVERIKTLRKELEELDEEMAVGGL--KIVNLQRRRENLKQLNDAVQQLKQIVNAVASCE 344

Query: 64  TVIG----DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +++     +   D+       I    +  +  + + ++  L          + +  +R  
Sbjct: 345 SMVENGDVEQALDAIDALEKLIAGEEMLSKPGQHKIQLRDLRGAIALQGVNNDLDVLRFR 404

Query: 120 TGGSEAALFVGDLFRMYERYAA 141
            G S  + F+  L     R+  
Sbjct: 405 IGKSFESRFLQALLGDLRRHVD 426


>gi|20379621|gb|AAH27731.1| MTRF1 protein [Homo sapiens]
 gi|119629055|gb|EAX08650.1| mitochondrial translational release factor 1, isoform CRA_b [Homo
           sapiens]
          Length = 151

 Score = 40.9 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK-LTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L   +  +E  +   P  +   + L   +A ++P+ +      + +Q  ++L +
Sbjct: 76  QKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELES 135

Query: 65  VIGDHNS 71
           +     S
Sbjct: 136 MCKKTES 142


>gi|317124471|ref|YP_004098583.1| ABC transporter [Intrasporangium calvum DSM 43043]
 gi|315588559|gb|ADU47856.1| ABC transporter related protein [Intrasporangium calvum DSM 43043]
          Length = 571

 Score = 40.6 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 3/64 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R+ EI   M++  +   +  L +E   +   I     +D    + +     +  
Sbjct: 107 IKAKLDRYNEISAEMADPDA--DFDALLQEMGKLQEQIDHADAWD-LDNQLEQAMDALRC 163

Query: 69  HNSD 72
              D
Sbjct: 164 PPPD 167


>gi|296126911|ref|YP_003634163.1| AAA ATPase [Brachyspira murdochii DSM 12563]
 gi|296018727|gb|ADG71964.1| AAA ATPase [Brachyspira murdochii DSM 12563]
          Length = 1284

 Score = 40.6 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 4/125 (3%)

Query: 12  LKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           LK++  EI  +MS++   D  Y KL++E+     I  +IS       E ++ +  + D +
Sbjct: 682 LKSKMNEIRDKMSDADISDDDYEKLSKEF---RNIKKEISQLKNNSFELKETYKALLDES 738

Query: 71  SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVG 130
              E  D     ++    +   L+ E    +     +   +    ++          F  
Sbjct: 739 IIKEYNDTKNTNIIKECIDKNILKIEKIKNVFNNIEEYSNTYKYSLKEEDIKELENNFKS 798

Query: 131 DLFRM 135
              R+
Sbjct: 799 LQGRI 803


>gi|148264585|ref|YP_001231291.1| class I peptide chain release factor [Geobacter uraniireducens Rf4]
 gi|146398085|gb|ABQ26718.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4]
          Length = 108

 Score = 40.6 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 1/72 (1%)

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           + ++I   DI+I+  RASG GGQH NTTDSAVRI H+PTGI+V  S  +SQ QNR  AM 
Sbjct: 1   MAMEIKESDIKIEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREVAMH 60

Query: 272 VLRARLYDVERK 283
            L+  L   ERK
Sbjct: 61  RLQEALLKRERK 72


>gi|221128265|ref|XP_002155082.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 887

 Score = 40.6 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKI-SIYDQKKQEE 59
           M  L  K++ +  +R  ++E +++    +D   +L +E   ++  +  + + YD+   + 
Sbjct: 720 MKKLLRKKMFN--DRIEKLENKLNS--VIDENKELKKELGELNKAVEFVSNNYDKIVADH 775

Query: 60  QDLHTVIGDH 69
           Q   T + + 
Sbjct: 776 QTSKTSLINE 785


>gi|89076237|ref|ZP_01162585.1| putative ABC transporter, ATP-binding protein [Photobacterium sp.
           SKA34]
 gi|89048066|gb|EAR53653.1| putative ABC transporter, ATP-binding protein [Photobacterium sp.
           SKA34]
          Length = 644

 Score = 40.6 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++I DL+N  A I+ ++++          T+  AA++ +      ++   +  ++L  + 
Sbjct: 584 QKIEDLENEIANIQEQINDPAFFSDPKNDTQ--AALTGLAKLEEEFEVAFERWEELEAMQ 641

Query: 67  GD 68
            +
Sbjct: 642 KE 643


>gi|15669345|ref|NP_248150.1| cell division protein CDC48 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2492505|sp|Q58556|Y1156_METJA RecName: Full=Cell division cycle protein 48 homolog MJ1156
 gi|1591785|gb|AAB99153.1| cell division control protein 48 (cdc48), AAA family
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 903

 Score = 40.6 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/91 (10%), Positives = 24/91 (26%), Gaps = 5/91 (5%)

Query: 6   HKQICDLKNRFAE----IELRMSESPSVDAYIKLTEEYAA-ISPIISKISIYDQKKQEEQ 60
            ++I  ++    +    I     +    D   KL +     +  +   I    + + +  
Sbjct: 743 KEKIEAVEKEIDKFLEVINKEELKPSEKDEAQKLAKYLKDILGKLKEMIDNIYELENKLN 802

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIR 91
            L   +     D  I+    I          
Sbjct: 803 TLKEQVSAEEIDEIIKTTQNIIQRFTTSLDE 833


>gi|212638649|ref|YP_002315169.1| flagellar motor protein MotB [Anoxybacillus flavithermus WK1]
 gi|212560129|gb|ACJ33184.1| Flagellar motor protein B [Anoxybacillus flavithermus WK1]
          Length = 251

 Score = 40.2 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 4/166 (2%)

Query: 15  RFAEIELRMSESPSVDAYIKLTEE-YAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
              E++  + +SP+   Y+K+++E Y  +  I SK + Y +  Q   +L   + +     
Sbjct: 72  EREEVDSVIKDSPNQKPYVKISKEEYEELKKIQSKFNEYVKTNQLSGELSVAMTEEGL-L 130

Query: 74  EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLF 133
                  +          +  N    +      +  ++ ++           A F  +  
Sbjct: 131 VTIANDVLFDSGSADIKPQYRNVAKKISNLLVMNPPRNIVISGHTDNVPINNAKFASNWE 190

Query: 134 RMYERYAALRK--WKVEVLSSSDNDDGGYKEIVATISGRGVFSRMK 177
               R     K   +   L        GY E     S      R K
Sbjct: 191 LSVMRAVNFMKLLLENTKLDPQLFSAKGYGEFKPIASNATPEGRAK 236


>gi|225560057|gb|EEH08339.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 2533

 Score = 40.2 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 37/111 (33%), Gaps = 7/111 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  ++            +E   I   I+ +      +    D
Sbjct: 2219 IMVLQDQLQQREGRIEELEQELAAID--KDAPAKVKER-EIE--INWLRELLGVR--LDD 2271

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            L  +I   +  S  +   +   + ++  ++  + E    +   + +  +  
Sbjct: 2272 LQDIINTLSQPSFNQQAVRDAAIRLKANMQMEQQEKERAMSGGNGNGSQQF 2322


>gi|289807125|ref|ZP_06537754.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 145

 Score = 40.2 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 1/75 (1%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 70  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISV 129

Query: 256 -TSSEKSQHQNRLRA 269
              SE+SQH N+   
Sbjct: 130 KVQSERSQHANKRLG 144


>gi|123414056|ref|XP_001304412.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121885862|gb|EAX91482.1| hypothetical protein TVAG_384620 [Trichomonas vaginalis G3]
          Length = 459

 Score = 40.2 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 57/172 (33%), Gaps = 15/172 (8%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIY--DQKKQEEQDL 62
              +I  LK R + +   ++  PSV+ + KL++    +         Y        + +L
Sbjct: 27  MKDEIDSLKYRVSYLTDELNSRPSVEDFRKLSQAVKELQDTNKTYENYMTQTIDSAKTEL 86

Query: 63  HTVIGDHNSD--SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
             +I     D  S++ +        I  +   ++ ++  +  P    ++    + +    
Sbjct: 87  GKMIEGGKKDVKSQMEETTLSINQVIRAQNTLMDKKVFDMTRPTFEFNEMKRSVTVINEQ 146

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
                         + ++   +  W    ++ +  D+G  +  +  I    +
Sbjct: 147 NAV-----------IEKKLDKIFTWIAGFINEAFPDNGRCRITLEKIFESHI 187


>gi|222056398|ref|YP_002538760.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
 gi|221565687|gb|ACM21659.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
          Length = 108

 Score = 40.2 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 1/72 (1%)

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           + ++I   DI+++  RASG GGQH NTTDSAVRI H+PTGI+V  +  +SQ QNR  AM 
Sbjct: 1   MTMEIKETDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQAAENRSQWQNRELAMS 60

Query: 272 VLRARLYDVERK 283
            L+  L   ERK
Sbjct: 61  RLQQALIKRERK 72


>gi|320352217|ref|YP_004193556.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032]
 gi|320120719|gb|ADW16265.1| ABC transporter related protein [Desulfobulbus propionicus DSM
           2032]
          Length = 666

 Score = 40.2 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 9   ICDLKNRFAEIELRMSESP---SVDAYIKLTEEYAAISP-IISKISIYDQKKQEEQDLH 63
           I   ++R AE+E  M++       + +   ++EY  +   +      +++ +Q  + + 
Sbjct: 600 IERYESRKAELEALMADPDLYGDQERWSATSKEYGQVERHLERAYQRWEEAQQAIEAIE 658


>gi|168033750|ref|XP_001769377.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679297|gb|EDQ65746.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 595

 Score = 40.2 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+I+  +SE+ SV    KL+E  A +S  ++ I +    + E +D    I D 
Sbjct: 392 DEIQARIAQIKKELSETDSVYDTEKLSERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 451

Query: 70  NS 71
            +
Sbjct: 452 KN 453


>gi|121716020|ref|XP_001275619.1| dynactin, putative [Aspergillus clavatus NRRL 1]
 gi|119403776|gb|EAW14193.1| dynactin, putative [Aspergillus clavatus NRRL 1]
          Length = 1386

 Score = 40.2 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 41/129 (31%), Gaps = 7/129 (5%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQ- 60
            K++ + + +  E+E   +E+ S+     L  E A                  + +E Q 
Sbjct: 394 RKKLKETEAKLEEVERLQAENDSILEMAALDREMAE--ETADAFRHECELLRARVEELQL 451

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L  +  ++    +     +       +  +  E     L+  +D    +   L+ +   
Sbjct: 452 ELDILKEENEELGQTMSPEERSSHGWLQMEKTNERLREALIRLRDMTQQQESDLKDQIKE 511

Query: 121 GGSEAALFV 129
              +   + 
Sbjct: 512 LEQDLEDYA 520


>gi|46128916|ref|XP_388962.1| hypothetical protein FG08786.1 [Gibberella zeae PH-1]
          Length = 2291

 Score = 40.2 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  +Q+   + R  E+E  +S+    +A  K+T+        I+ +      +   ++
Sbjct: 2026 IMVLQEQLQAREQRIEELEQSLSK-TDPEASTKITKR----DDEITWLRELLAVR--HEN 2078

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
            L  +I    SDS  RD  +   + ++  ++  E E    + 
Sbjct: 2079 LQDIIAALQSDSFDRDAVKDAAIRLKANLQMEEQERERAMN 2119


>gi|328544687|ref|YP_004304796.1| ABC transporter ATPase [polymorphum gilvum SL003B-26A1]
 gi|326414429|gb|ADZ71492.1| ABC transporter, ATPase subunit [Polymorphum gilvum SL003B-26A1]
          Length = 603

 Score = 40.2 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 6/62 (9%), Positives = 25/62 (40%), Gaps = 5/62 (8%)

Query: 7   KQICDLKNRFAEIELRMSESP----SVDAYIKLTEEYAAISPIISKISI-YDQKKQEEQD 61
           + I  L  +  +++  M++      + D + +L+ E   ++         + + +  +++
Sbjct: 541 ETIEKLDAQLEKLQADMADPDLYSRNPDRFARLSAEITKLTEEKDAAEEQWLELEMLKEE 600

Query: 62  LH 63
             
Sbjct: 601 AE 602


>gi|85105974|ref|XP_962075.1| hypothetical protein NCU05304 [Neurospora crassa OR74A]
 gi|28923669|gb|EAA32839.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 485

 Score = 40.2 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 1/115 (0%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPII-SKISIYDQKKQEEQDLHT 64
            KQI DLK +  EI+  + +  +     K  +  A +  I   +   Y        +   
Sbjct: 171 QKQIDDLKAKIKEIKDSLEDPEAKALSEKYNKLQAELDAIKAEQDEAYKNLSSLRDERTK 230

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +    +   +     + E    +KE  + E E       +   + +    E R  
Sbjct: 231 LQQLQSEKYQAIKKLKDEYYGAKKEFAKWEREQREKARERQQAERERIAKERRME 285


>gi|148252694|ref|YP_001237279.1| class I peptide chain release factor domain-containing protein
           [Bradyrhizobium sp. BTAi1]
 gi|146404867|gb|ABQ33373.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. BTAi1]
          Length = 207

 Score = 40.2 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           ++  G                      + V         D+   D+R ++ RA G GGQH
Sbjct: 67  RWTQGPLLWVCRSPLRPHHGRKNWFVGI-VDLPLPHQVPDLAAADVRCESFRAGGPGGQH 125

Query: 237 VNTTDSAVRITHIPTG-IMVTSSEKSQHQN 265
            N T+SAVR  H+PTG   +    +SQH+N
Sbjct: 126 QNKTESAVRAIHLPTGLTAIARDGRSQHRN 155


>gi|283780964|ref|YP_003371719.1| peptide chain release factor I [Pirellula staleyi DSM 6068]
 gi|283439417|gb|ADB17859.1| Class I peptide chain release factor [Pirellula staleyi DSM 6068]
          Length = 191

 Score = 40.2 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 195 GRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM 254
           G V  S A V   P  A + ++    + +I+  R  G GGQH N  ++AV ITH PTG+ 
Sbjct: 14  GEVLASLAMVDA-PHPAALPLEKLARECQIEFTRRGGPGGQHRNKVETAVVITHQPTGLA 72

Query: 255 -VTSSEKSQHQNRLRAMKVLRARLYDVERKRMA 286
              S  +SQ  NR  A + LR  L    R R  
Sbjct: 73  GQASETRSQDHNREEAYQRLRIELATGLRTRRE 105


>gi|224104681|ref|XP_002313525.1| predicted protein [Populus trichocarpa]
 gi|222849933|gb|EEE87480.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score = 40.2 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  +SE+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 384 DELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 443

Query: 70  NS 71
            +
Sbjct: 444 KN 445


>gi|224132004|ref|XP_002328161.1| predicted protein [Populus trichocarpa]
 gi|222837676|gb|EEE76041.1| predicted protein [Populus trichocarpa]
          Length = 587

 Score = 40.2 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  +SE+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 384 DELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 443

Query: 70  NS 71
            +
Sbjct: 444 KN 445


>gi|328856522|gb|EGG05643.1| hypothetical protein MELLADRAFT_116786 [Melampsora larici-populina
           98AG31]
          Length = 1443

 Score = 40.2 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 44/128 (34%), Gaps = 5/128 (3%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ--- 60
           L   +  + +++  E+E    ++   +  +K  +  A ++    +I    +  +E +   
Sbjct: 406 LMESRRNEDRDKIRELEKVKEDTEDWNNVVK-PKLQAKLNECTEEIKALKKLNKELEASQ 464

Query: 61  -DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            +    + D + + E+  L +        +   L   +   L     +      ++ R  
Sbjct: 465 QEAENRLADFSDEVELATLDKEMAEERLDQTEVLMVTMKEELENLKVELSALKEIQDRIE 524

Query: 120 TGGSEAAL 127
            G +  + 
Sbjct: 525 NGDTNDSD 532


>gi|240278808|gb|EER42314.1| beta-glucosidase [Ajellomyces capsulatus H143]
          Length = 2805

 Score = 40.2 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  ++            +E       I+ +      +    D
Sbjct: 2491 IMVLQDQLQQREGRIEELEQELAAID--KDAPAKVKER---ETEINWLRELLGVR--LDD 2543

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            L  +I   +  S  +   +   + ++  ++  + E    +   + +  +  
Sbjct: 2544 LQDIINTLSQPSFNQQAVRDAAIRLKANMQMEQQEKERAMSGGNGNGSQQF 2594


>gi|90578612|ref|ZP_01234422.1| putative ABC transporter, ATP-binding protein [Vibrio angustum S14]
 gi|90439445|gb|EAS64626.1| putative ABC transporter, ATP-binding protein [Vibrio angustum S14]
          Length = 644

 Score = 40.2 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++I DL+N  A+I+ ++++          T+  A ++ +      ++   +  ++L  + 
Sbjct: 584 QKIEDLENEIAKIQEQINDPAFFSDPKNDTQ--ATLTGLAKLEEEFEVAFERWEELEAMQ 641

Query: 67  GD 68
            +
Sbjct: 642 KE 643


>gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818]
 gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97]
          Length = 191

 Score = 39.8 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)

Query: 207 LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQN 265
           L +       I   +I    ++ SG GGQ +N T SAV++ HIPT  +V   + +SQ QN
Sbjct: 39  LAKQMPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQN 98

Query: 266 RLRAMKVLRARLYDVERKRMANERSAN 292
           R  A ++L  ++  +E  +    R+A 
Sbjct: 99  RKIAKRILAEKIELLE--KGEQSRAAI 123


>gi|88810356|ref|ZP_01125613.1| probable ATP-binding component of ABC transporter [Nitrococcus
           mobilis Nb-231]
 gi|88791986|gb|EAR23096.1| probable ATP-binding component of ABC transporter [Nitrococcus
           mobilis Nb-231]
          Length = 641

 Score = 39.8 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYI-KLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           ++I  L+ +  E++ R+S+    +     + +  A +    +++    ++  E +D+   
Sbjct: 576 ERIEVLEAKVGELQARISDPAFYNEPQTTIQKTLAELDTRQTELDRALERWAELEDMKAA 635

Query: 66  IG 67
           + 
Sbjct: 636 LE 637


>gi|39996074|ref|NP_952025.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39982839|gb|AAR34298.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens
           PCA]
 gi|298505090|gb|ADI83813.1| hydrolase, putative [Geobacter sulfurreducens KN400]
          Length = 107

 Score = 39.8 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           + VDI   DI+++  RASG GGQH NTTDSAVRI H+PTGI+V  S  +SQ QNR +AM+
Sbjct: 1   MTVDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAME 60

Query: 272 VLRARLYDVERK 283
            LR  L   ERK
Sbjct: 61  RLRIALEKRERK 72


>gi|323488391|ref|ZP_08093638.1| hypothetical protein GPDM_03575 [Planococcus donghaensis MPA1U2]
 gi|323397898|gb|EGA90697.1| hypothetical protein GPDM_03575 [Planococcus donghaensis MPA1U2]
          Length = 479

 Score = 39.8 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++  L  +  E+  +++++ +   D   K+ +    I  +   I   +QK +E + L  
Sbjct: 62  KLDQLTAKIEELNTQITDTETKISDVQAKIDKTKVEIDELKKSIEELEQKIEEREGLLK 120


>gi|298207258|ref|YP_003715437.1| glutamyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849894|gb|EAP87762.1| glutamyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 1146

 Score = 39.8 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 7/73 (9%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           + +  L  +  E+     +  + +A  +L +E+  +      +   +++ ++ ++   + 
Sbjct: 656 EDLEKLAQKQEELSKNDGDENTKEAQEELNKEFKKLQ---EDLKDLEEENKDLKEPMDIS 712

Query: 67  GDHNSDSEIRDLA 79
            D   +  I++  
Sbjct: 713 RDEEKEESIKEDQ 725


>gi|320353117|ref|YP_004194456.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032]
 gi|320121619|gb|ADW17165.1| ABC transporter related protein [Desulfobulbus propionicus DSM
           2032]
          Length = 611

 Score = 39.8 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISK-ISIYDQKKQEEQ 60
             ++I   + R  E+E  M+    +    +L     E   +     +    +D+ +Q  Q
Sbjct: 551 MEERILAAEARLGELEALMASPEVMANPAQLHRYWEEQQELQTKTEQLYDRWDELEQRRQ 610


>gi|325090062|gb|EGC43372.1| myosin class II heavy chain [Ajellomyces capsulatus H88]
          Length = 2442

 Score = 39.8 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  ++            +E       I+ +      +    D
Sbjct: 2128 IMVLQDQLQQREGRIEELEQELAAID--KDAPAKVKER---ETEINWLRELLGVR--LDD 2180

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            L  +I   +  S  +   +   + ++  ++  + E    +   + +  +  
Sbjct: 2181 LQDIINTLSQPSFNQQAVRDAAIRLKANMQMEQQEKERAMSGGNGNGSQQF 2231


>gi|270692598|ref|ZP_06222918.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
 gi|270316067|gb|EFA28088.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
          Length = 32

 Score = 39.8 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 21/30 (70%)

Query: 328 LEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           ++ V+ G ID++I P++T +QA  + + SE
Sbjct: 1   MDEVMNGKIDELIQPIITEYQADQLAALSE 30


>gi|145594573|ref|YP_001158870.1| class I peptide chain release factor [Salinispora tropica CNB-440]
 gi|145303910|gb|ABP54492.1| Class I peptide chain release factor [Salinispora tropica CNB-440]
          Length = 202

 Score = 39.8 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 2/139 (1%)

Query: 158 GGYKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDI 217
           G Y+ ++  ++G GV +     +G    Q                          +    
Sbjct: 50  GTYRSVLVRLTGTGVEAFAARWTGTLCWQAPSPYRTGHGRKNWYVAARQCEVDVPVTPFT 109

Query: 218 PLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRAR 276
              D+ +  +R  G GGQH N   +AVR TH PTG +V    E+    NR  A+++LR R
Sbjct: 110 E-ADVEVLAVRTGGPGGQHRNKASTAVRATHRPTGTVVVVDTERQLSLNRSIALRLLRQR 168

Query: 277 LYDVERKRMANERSANRKL 295
           +   +        +  R+ 
Sbjct: 169 ITAGDEAARRALVAIRRRA 187


>gi|125528646|gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group]
          Length = 246

 Score = 39.8 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           +  D  +    + T +ASG GGQH N  +SAVR+ H PTGI+     ++SQH NR  A+ 
Sbjct: 77  MSDDELMGQCEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNRASALS 136

Query: 272 VLRARLYDVERKRMANE 288
            LR  +    RK +  E
Sbjct: 137 RLRTLIALKVRKPINLE 153


>gi|330445994|ref|ZP_08309646.1| ATP-binding protein with possible role in replication
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490185|dbj|GAA04143.1| ATP-binding protein with possible role in replication
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 642

 Score = 39.8 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++I +L+N  AE++ ++++          T+  A ++ +    + ++   +  ++L  + 
Sbjct: 582 QKIENLENEIAELQEKINDPDFFANPSNDTQ--AILTHLAEIETEFEVAFERWEELEAMQ 639

Query: 67  GD 68
            +
Sbjct: 640 KE 641


>gi|297826149|ref|XP_002880957.1| CPN60A [Arabidopsis lyrata subsp. lyrata]
 gi|297326796|gb|EFH57216.1| CPN60A [Arabidopsis lyrata subsp. lyrata]
          Length = 587

 Score = 39.8 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  +SE+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 384 DELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 443

Query: 70  NS 71
            +
Sbjct: 444 KN 445


>gi|37523609|ref|NP_926986.1| hypothetical protein glr4040 [Gloeobacter violaceus PCC 7421]
 gi|35214614|dbj|BAC91981.1| glr4040 [Gloeobacter violaceus PCC 7421]
          Length = 125

 Score = 39.8 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 14/103 (13%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSE-KSQHQNRL 267
            A  +D +    D  ++ + ASG GGQH N T+S VR+TH P+G++V+++E +SQHQNR 
Sbjct: 12  PAYPLDREALERDCTLEFVIASGPGGQHRNKTESGVRLTHRPSGVVVSATERRSQHQNRE 71

Query: 268 RAMKVLRARLYDVER-------------KRMANERSANRKLQI 297
            A + + A+L D++R              ++ +  +  R+  I
Sbjct: 72  VAFERMAAKLADLQRVRAPRKPTRKPRAAKLRDLEAKKRRSAI 114


>gi|307292776|ref|ZP_07572622.1| ABC transporter related protein [Sphingobium chlorophenolicum L-1]
 gi|306880842|gb|EFN12058.1| ABC transporter related protein [Sphingobium chlorophenolicum L-1]
          Length = 561

 Score = 39.8 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I D  +RF EI + M++ P    +  L EE   +   I  +  +     + +     +  
Sbjct: 101 IADKLDRFNEISMIMADPPEDVDFDALMEEMGTLQEQIDAVDGW-TLDNQLEIAMEALRC 159

Query: 69  HNSD 72
             SD
Sbjct: 160 PPSD 163


>gi|226320895|ref|ZP_03796446.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233667|gb|EEH32397.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 81

 Score = 39.8 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 4  LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTE---EYAAISPIISKISIYDQKKQEEQ 60
          +  +++    ++   IE ++ +   +    K ++   EY  +  I +K   Y++   +  
Sbjct: 1  MLLEKLNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQIN 60

Query: 61 DLHTVIGDHNSDSEIR 76
          D  T++   +      
Sbjct: 61 DTKTILEKEDQQEMKE 76


>gi|332701466|ref|ZP_08421554.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551615|gb|EGJ48659.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 659

 Score = 39.8 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 21/55 (38%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           I  L+   AE+  R+S          + +  A ++ I S +     + +E +   
Sbjct: 591 IEALETEQAELNARLSSPGLYSDPQSVQKVQARMAEIESGLDRALARWEELESAQ 645


>gi|189426554|ref|YP_001953731.1| class I peptide chain release factor [Geobacter lovleyi SZ]
 gi|189422813|gb|ACD97211.1| Class I peptide chain release factor [Geobacter lovleyi SZ]
          Length = 107

 Score = 39.8 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           + ++I   DIR++  RASG GGQH NTTDSAVRI H+PTGI+V  +  +SQ +NR  AM+
Sbjct: 1   MSIEINETDIRVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVHAAENRSQLRNREVAME 60

Query: 272 VLRARLYDVERKRMANERSANRKLQ 296
            LR  L    R       +   K Q
Sbjct: 61  RLRLALEKRNRVEKKRMATKVPKGQ 85


>gi|291533126|emb|CBL06239.1| hypothetical protein MHY_13580 [Megamonas hypermegale ART12/1]
          Length = 121

 Score = 39.8 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 30/95 (31%), Gaps = 1/95 (1%)

Query: 23  MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82
           M E    D   +  +    ++ + + +  Y     + +++  +      D +   +    
Sbjct: 1   MGEPTFWDDPDQAQKITQELNGVKAGVDKYKNILHKFEEMQILWEMGMEDKD-ETVCDDV 59

Query: 83  VLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              I++    +E     LLL    D + +      
Sbjct: 60  EAEIKEINEAIEQLELELLLSGKYDANNAIFDSTC 94


>gi|145351791|ref|XP_001420246.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580480|gb|ABO98539.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1109

 Score = 39.8 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 58/137 (42%), Gaps = 6/137 (4%)

Query: 7   KQICDLKNRFAEIELRM--SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           +++ +++N  AE+  ++  +     +A  +L  E A+ + I+  I + +++ +E ++   
Sbjct: 521 EKLANMRNERAELRAQLDQANEAFHEANDRLESERASKADIVDTIQMLERQLKESKEA-- 578

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
                + ++    L  +  + +++   EL+  +      K  +   +  L+  A   G++
Sbjct: 579 --AIASDNATTDKLDDLTAIQLQELRDELQQVVVLEQKLKRAEAAHAEELKETAEQNGAD 636

Query: 125 AALFVGDLFRMYERYAA 141
            + +   L     R   
Sbjct: 637 ISEWQNKLHEADSRAGE 653


>gi|85115685|ref|XP_964921.1| hypothetical protein NCU09104 [Neurospora crassa OR74A]
 gi|28926718|gb|EAA35685.1| predicted protein [Neurospora crassa OR74A]
          Length = 2300

 Score = 39.4 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  +Q+   + R  E+E ++ ++   +A  K+++        I  +      +    D
Sbjct: 1982 IMVLQEQLQARELRIEELEQQLEKAD-PEAETKISKR----DDEIIWLRELLAVR--HSD 2034

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
            L  +IG  +SD+  +D  +   + ++  ++  E E    +      +  +    IR
Sbjct: 2035 LQDIIGALSSDNYDKDAVRDAAIRLKANLQMEEQERERAMNGGSAINLPNIAATIR 2090


>gi|78222830|ref|YP_384577.1| class I peptide chain release factor [Geobacter metallireducens
           GS-15]
 gi|78194085|gb|ABB31852.1| Class I peptide chain release factor [Geobacter metallireducens
           GS-15]
          Length = 107

 Score = 39.4 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           +I   D++ +  R SG GGQH N T+S VRI H+PTG++V     +SQ +NR  A++ LR
Sbjct: 3   EINEADLKFEFYRGSGPGGQHRNVTESGVRIRHVPTGVVVQACESRSQARNREIALERLR 62

Query: 275 ARL 277
             L
Sbjct: 63  QIL 65


>gi|309812176|ref|ZP_07705934.1| ATP-binding cassette protein, ChvD family [Dermacoccus sp.
           Ellin185]
 gi|308433863|gb|EFP57737.1| ATP-binding cassette protein, ChvD family [Dermacoccus sp.
           Ellin185]
          Length = 560

 Score = 39.4 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           QI    +RF EI   M E  +   +  L EE   +   I     +D    + +     + 
Sbjct: 95  QIKVDLDRFNEISAEMGEPDA--DFDALMEEMGKLQEKIDAADAWD-IDSQLEQAMDALR 151

Query: 68  DHNSDSE 74
               D++
Sbjct: 152 CPPGDAD 158


>gi|94496415|ref|ZP_01302992.1| ABC transporter related protein [Sphingomonas sp. SKA58]
 gi|94424161|gb|EAT09185.1| ABC transporter related protein [Sphingomonas sp. SKA58]
          Length = 561

 Score = 39.4 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + D  +RF EI + M++ P    +  L EE   +   I     +     + +     +  
Sbjct: 101 MADKLDRFNEISMIMADPPEDADFDALMEEMGTLQEQIDAADGW-TLDNQLEIAMEALRC 159

Query: 69  HNSD 72
             SD
Sbjct: 160 PPSD 163


>gi|332594835|emb|CCA89251.1| transmembrane actin-binding protein involved in membrane
           cytoskeleton assembly and cell polarization
           [Kluyveromyces marxianus]
 gi|332594847|emb|CCA89262.1| transmembrane actin-binding protein involved in membrane
           cytoskeleton assembly and cell polarization
           [Kluyveromyces marxianus]
          Length = 706

 Score = 39.4 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 9   ICDLKNRFAEIELRM-SESPSVDAYIKLTEEYAAI-SPIISKISIYDQKKQEEQDLHTVI 66
           +     R  E+E  + ++    + Y  L + Y+ +    ++ +    + + +  D    +
Sbjct: 523 LEQYDKRVQELESELEAQKEFKEKYQSLAKLYSQLRQEHLNVLKKVKKLQDDLNDSRNEV 582

Query: 67  GDHNSDS 73
            D   ++
Sbjct: 583 SDLKKEA 589


>gi|302664659|ref|XP_003023957.1| myosin class II heavy chain (MHC), putative [Trichophyton verrucosum
            HKI 0517]
 gi|291187980|gb|EFE43339.1| myosin class II heavy chain (MHC), putative [Trichophyton verrucosum
            HKI 0517]
          Length = 2417

 Score = 39.4 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  +S     DA  K+          I+ +      +    D
Sbjct: 2134 IMVLQDQLQQREGRIEELEQELSTIDR-DAPAKI----KEKETEINWLRELLSVR--LDD 2186

Query: 62   LHTVI 66
            L  +I
Sbjct: 2187 LRDLI 2191


>gi|118587642|ref|ZP_01545052.1| ABC transporter, ATP-binding protein [Stappia aggregata IAM 12614]
 gi|118439264|gb|EAV45895.1| ABC transporter, ATP-binding protein [Stappia aggregata IAM 12614]
          Length = 603

 Score = 39.4 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 6/60 (10%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 7   KQICDLKNRFAEIELRMSES----PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           + I  L+ R   ++  M++      + D + K++++   ++           + +   + 
Sbjct: 543 ETIEKLEARLETLQAEMNDPQLYVKNPDKFAKISQQITDLTAEKDAAEEQWLELEMLNEA 602


>gi|294786641|ref|ZP_06751895.1| ABC transporter, ATP-binding protein [Parascardovia denticolens
           F0305]
 gi|315226229|ref|ZP_07868017.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Parascardovia denticolens DSM 10105]
 gi|294485474|gb|EFG33108.1| ABC transporter, ATP-binding protein [Parascardovia denticolens
           F0305]
 gi|315120361|gb|EFT83493.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Parascardovia denticolens DSM 10105]
          Length = 559

 Score = 39.4 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF +I   M+   +   +  L +E   +   I   + +D  + +       + 
Sbjct: 95  DIQQKVRRFNQIGEEMANPDA--DFDALMKEMGELQTEIDAANGWD-LESQLSQAMDALQ 151

Query: 68  DHNSDS 73
             + D+
Sbjct: 152 CPDPDT 157


>gi|168005024|ref|XP_001755211.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693804|gb|EDQ80155.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 550

 Score = 39.4 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+  S  +  +++ R A+I+  ++E+ SV    KL+E  A +S  ++ I +    + E +
Sbjct: 339 MIADSASK-DEIQARIAQIKKELAETDSVYDTEKLSERIAKLSGGVAVIKVGAATETELE 397

Query: 61  DLHTVIGDHNS 71
           D    I D  +
Sbjct: 398 DRKLRIEDAKN 408


>gi|203459047|ref|YP_002224203.1| gp204 [Mycobacterium phage ScottMcG]
 gi|197312494|gb|ACH62849.1| gp204 [Mycobacterium phage ScottMcG]
          Length = 118

 Score = 39.4 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYD 279
           D  ++T R SG GGQ+ N  D+AVRI H P+G +  +  E+SQ QN+  A + +      
Sbjct: 13  DCVVETKRGSGKGGQNRNKRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAESSKF 72

Query: 280 VERKRMANERSANRKLQI 297
               +         K Q+
Sbjct: 73  QLWLKRQVANDDLIKAQV 90


>gi|261403322|ref|YP_003247546.1| AAA family ATPase, CDC48 subfamily [Methanocaldococcus vulcanius
           M7]
 gi|261370315|gb|ACX73064.1| AAA family ATPase, CDC48 subfamily [Methanocaldococcus vulcanius
           M7]
          Length = 903

 Score = 39.4 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 10/91 (10%), Positives = 24/91 (26%), Gaps = 5/91 (5%)

Query: 6   HKQICDLKNR----FAEIELRMSESPSVDAYIKLTEEYAA-ISPIISKISIYDQKKQEEQ 60
            ++I  ++         I     +    D   KL +     ++ +   I    + + +  
Sbjct: 743 KEKIEAVEKEVDNFLEIINKEELKPSEKDEAQKLAKYLKDILNKLKEMIDNIYELENKLN 802

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIR 91
            L   +     D  I+    I          
Sbjct: 803 TLKDQVSAEEIDEIIKTTQNILQRFTTSLDE 833


>gi|308049602|ref|YP_003913168.1| ABC transporter [Ferrimonas balearica DSM 9799]
 gi|307631792|gb|ADN76094.1| ABC transporter related protein [Ferrimonas balearica DSM 9799]
          Length = 640

 Score = 39.4 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 8   QICDLKNRFAEIELRMSESPSVD-AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           ++  L+     ++ +++E    D     +    A ++ +  K    +Q     ++L  +
Sbjct: 581 KLETLEAEIESLQAQIAEPGFFDGDSQAVN---AVLTRLAEKEQELEQDFARWEELEAM 636


>gi|269955889|ref|YP_003325678.1| ABC transporter-like protein [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304570|gb|ACZ30120.1| ABC transporter related protein [Xylanimonas cellulosilytica DSM
           15894]
          Length = 560

 Score = 39.4 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M+E  +   +  L  E   +   I     ++    + +     +  
Sbjct: 96  IKAKVDRFNEISTLMAEPDA--DFDALLAEMGELQEAIDHADAWE-LDSQLEQAMDALRC 152

Query: 69  HNSDSE 74
              D++
Sbjct: 153 PPPDAD 158


>gi|256848117|ref|ZP_05553561.1| ABC transporter ATP-binding component [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715177|gb|EEU30154.1| ABC transporter ATP-binding component [Lactobacillus coleohominis
           101-4-CHN]
          Length = 645

 Score = 39.4 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +  L+ +  +IE +MS+        KL++    +       +  DQ ++        + +
Sbjct: 586 LDQLQAQHDQIEQQMSDPEIATDIAKLSDLQKELE---QCQTEMDQAEENWTSAAEQLEE 642

Query: 69  HN 70
            N
Sbjct: 643 FN 644


>gi|323447462|gb|EGB03381.1| hypothetical protein AURANDRAFT_205 [Aureococcus anophagefferens]
          Length = 1037

 Score = 39.0 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 41/117 (35%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           + ++   + +      E+  ++ E    + Y    ++ +    I      Y Q  ++E++
Sbjct: 591 ILVTKSDLEEKNLAMQELRNKIEELQLHNEYQLRLKDMSYSEKIKEVTEKYMQDLEQEKN 650

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            + ++ +  +D E+    +   +  +      E E  Y        +    +   R+
Sbjct: 651 KYELLREEKNDIEMECEERHRQMEDKHHHELQELENTYQQKIMLEVERYQQLAHERS 707


>gi|325066936|ref|ZP_08125609.1| putative ABC transporter ATP-binding protein [Actinomyces oris K20]
          Length = 560

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R+ EI   M++  +   +  L  E   +   +   + +D    + +     +  
Sbjct: 96  IKSKLDRYNEISAAMADPDA--DFDALMAEMGTLQDALDAANAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIRD 77
              D+E++ 
Sbjct: 153 PPPDAEVKH 161


>gi|326771882|ref|ZP_08231167.1| ABC transporter, ATP-binding protein [Actinomyces viscosus C505]
 gi|326638015|gb|EGE38916.1| ABC transporter, ATP-binding protein [Actinomyces viscosus C505]
          Length = 560

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R+ EI   M++  +   +  L  E   +   +   + +D    + +     +  
Sbjct: 96  IKSKLDRYNEISAAMADPDA--DFDALMAEMGTLQDALDAANAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIRD 77
              D+E++ 
Sbjct: 153 PPPDAEVKH 161


>gi|327293926|ref|XP_003231659.1| hypothetical protein TERG_07958 [Trichophyton rubrum CBS 118892]
 gi|326466287|gb|EGD91740.1| hypothetical protein TERG_07958 [Trichophyton rubrum CBS 118892]
          Length = 2334

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  +S     DA  K+          I+ +      +    D
Sbjct: 2046 IMVLQDQLQQREGRIEELEQELSTIDR-DAPAKI----KEKETEINWLRELLSVR--LDD 2098

Query: 62   LHTVI 66
            L  +I
Sbjct: 2099 LRDLI 2103


>gi|317969669|ref|ZP_07971059.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
           [Synechococcus sp. CB0205]
          Length = 872

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 7   KQICDLKNRFAEIE-LRMS-----ESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEE 59
           +QI +L  R  ++E  ++S     ++ S D   +L +E A +S   S ++  + ++K   
Sbjct: 411 EQIDELDRRILQLEMEKLSLGRESDAASKDRLERLEKELADLSEQQSALNAQWQKEKGSI 470

Query: 60  QDLHTVIGDHN 70
            +L ++  +  
Sbjct: 471 DELSSIKEEIE 481


>gi|229815133|ref|ZP_04445470.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM
           13280]
 gi|229809363|gb|EEP45128.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM
           13280]
          Length = 126

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 207 LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQN 265
             + A + +D  + D  I   RASG GGQ VNTTDSAVR+ H+P+GI+V     +SQ QN
Sbjct: 11  YAKWASMPIDELVRDCDIQAFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQN 70

Query: 266 RLRAMKVLRARLYDVER 282
           R   ++ L+  L    R
Sbjct: 71  RASCLRKLKEELTRRAR 87


>gi|318041187|ref|ZP_07973143.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
           [Synechococcus sp. CB0101]
          Length = 872

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 7   KQICDLKNRFAEIE-LRMS-----ESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEE 59
           +QI +L  R  ++E  ++S     ++ S D   +L +E A +S   S ++  + ++K   
Sbjct: 411 EQIDELDRRILQLEMEKLSLGRESDAASKDRLERLEKELADLSEQQSTLNAQWQKEKGSI 470

Query: 60  QDLHTVIGDHN 70
            +L  +  +  
Sbjct: 471 DELGAIKEEIE 481


>gi|302497804|ref|XP_003010901.1| myosin class II heavy chain (MHC), putative [Arthroderma benhamiae
            CBS 112371]
 gi|291174447|gb|EFE30261.1| myosin class II heavy chain (MHC), putative [Arthroderma benhamiae
            CBS 112371]
          Length = 2339

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  +S     DA  K+          I+ +      +    D
Sbjct: 2056 IMVLQDQLQQREGRIEELEQELSTVDR-DAPAKI----KEKETEINWLRELLSVR--LDD 2108

Query: 62   LHTVI 66
            L  +I
Sbjct: 2109 LRDLI 2113


>gi|326479182|gb|EGE03192.1| myosin class II heavy chain [Trichophyton equinum CBS 127.97]
          Length = 2338

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  +S     DA  K+          I+ +      +    D
Sbjct: 2051 IMVLQDQLQQREGRIEELEQELSTIDR-DAPAKI----KEKETEINWLRELLSVR--LDD 2103

Query: 62   LHTVI 66
            L  +I
Sbjct: 2104 LRDLI 2108


>gi|281356039|ref|ZP_06242532.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548]
 gi|281317408|gb|EFB01429.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548]
          Length = 204

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 5/171 (2%)

Query: 109 DKSCILEIRAGTGGSEAALF-VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167
            K   LEI +G G  E  L     + R+        +++   L+ +  +    K ++  +
Sbjct: 1   MKRLFLEISSGQGPEECELLVAKLMVRLTSELRREVRFREVALNGN-REKSLVKSVLFEL 59

Query: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTM 227
            G G    +    G  +           +     A + +     E+  D    D+     
Sbjct: 60  EGEGAAVSVAPWLGTIQWIAASPFRPHHKRRNWYAGIRLFEAEPELAFDP--NDVEFSAS 117

Query: 228 RASGSGGQHVNTTDSAVRITHIPT-GIMVTSSEKSQHQNRLRAMKVLRARL 277
           R+SG GGQHVNT+++ ++  H PT    V   E+SQ +NR  A+  L A++
Sbjct: 118 RSSGPGGQHVNTSNTRIQAFHRPTGQCAVAGEERSQLRNRELALARLAAKV 168


>gi|1710807|sp|P08926|RUBA_PEA RecName: Full=RuBisCO large subunit-binding protein subunit alpha,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           alpha; AltName: Full=CPN-60 alpha; Flags: Precursor
 gi|1185390|gb|AAA87731.1| alphacpn60 precursor [Pisum sativum]
          Length = 587

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L++R A+++  +SE+ S+    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 385 DELQSRVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 444

Query: 70  NS 71
            +
Sbjct: 445 KN 446


>gi|120553410|ref|YP_957761.1| ABC transporter related [Marinobacter aquaeolei VT8]
 gi|120323259|gb|ABM17574.1| ABC transporter related protein [Marinobacter aquaeolei VT8]
          Length = 648

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKL-TEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++  L+ + A +E  +++    D   KL  +E   ++         D  + E  ++   +
Sbjct: 582 RMEQLQQKLATVEHNLADPGLYDDQQKLRLKEL--LAEQTELKRELDDVEAEWLEVSETV 639

Query: 67  GDHNSD 72
            +  ++
Sbjct: 640 ENLEAE 645


>gi|329297973|ref|ZP_08255309.1| ABC transporter ATPase component [Plautia stali symbiont]
          Length = 635

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 6/59 (10%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +++  L+ R  E++ +MS            +    +  +       +   +  ++L  +
Sbjct: 575 QKLEQLETRIGELQAQMSHPDFFSQPHD--KTQQVLDALAQAEQELETTFERWEELEAL 631


>gi|317130062|ref|YP_004096344.1| LPXTG-motif cell wall anchor domain protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475010|gb|ADU31613.1| LPXTG-motif cell wall anchor domain protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 968

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 35/59 (59%), Gaps = 9/59 (15%)

Query: 7   KQICDLKNRFAEIELRMS---ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           ++I +L+++ AE+E +++   +S  V+   ++      I  ++++I+  +Q+ QE +D 
Sbjct: 808 ERIAELEDQIAELEEQLNELVDSSVVEELQRI------IEDLLAQIAALEQQVQELKDA 860


>gi|169838607|ref|ZP_02871795.1| peptide chain release factor 2 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 61

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 119 GTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKF 178
           G GG++A  F   L RMY R+A     + +++  S  D+ G K  V  I+G   + R+  
Sbjct: 1   GVGGTDAQDFAEMLERMYLRFAEKSSLEAKIVERSSGDEAGLKTSVIEINGPYAYGRLHS 60

Query: 179 E 179
           E
Sbjct: 61  E 61


>gi|171685041|ref|XP_001907462.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942481|emb|CAP68133.1| unnamed protein product [Podospora anserina S mat+]
          Length = 2289

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 17/90 (18%)

Query: 2    VFLSHKQICDLKNRFAEIELRMS-------------ESPSVDAYIKLTEEYAAISPIISK 48
            + +  +Q+ + + R  E++ +++             +   +     L   ++ +  II+ 
Sbjct: 2016 IMVLQEQLQEREQRIEELDQKLAKVDPEAETKISKRDDEIIWLRELLAVRHSDLQDIIAA 2075

Query: 49   I--SIYDQ--KKQEEQDLHTVIGDHNSDSE 74
            +    YD+   K     L   +     + E
Sbjct: 2076 LGREDYDKNTVKDAAIRLKANLQMEEQERE 2105


>gi|326474277|gb|EGD98286.1| hypothetical protein TESG_05665 [Trichophyton tonsurans CBS 112818]
          Length = 2296

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  +S     DA  K+          I+ +      +    D
Sbjct: 2010 IMVLQDQLQQREGRIEELEQELSTIDR-DAPAKI----KEKETEINWLRELLSVR--LDD 2062

Query: 62   LHTVI 66
            L  +I
Sbjct: 2063 LRDLI 2067


>gi|329946376|ref|ZP_08293943.1| ATP-binding cassette protein, ChvD family [Actinomyces sp. oral
           taxon 170 str. F0386]
 gi|328527352|gb|EGF54350.1| ATP-binding cassette protein, ChvD family [Actinomyces sp. oral
           taxon 170 str. F0386]
          Length = 560

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +R+ EI   M++  +   +  L  E   +   +   + +D    + +     +  
Sbjct: 96  IKSKLDRYNEISAAMADPDA--DFDALMAEMGTLQDALDAANAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIRD 77
              D+E+++
Sbjct: 153 PPPDAEVKN 161


>gi|332701205|ref|ZP_08421293.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551354|gb|EGJ48398.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 657

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 26/69 (37%), Gaps = 8/69 (11%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISK-ISIYDQKKQEEQDLH- 63
           +  +  R  E+E  +++  +      +++LT EY        +    +   ++   +L  
Sbjct: 589 LESIMARQTELETLLADPATYSKTEEFVRLTSEYKQAKEREEQLFMDFSSLEESITELER 648

Query: 64  ---TVIGDH 69
               ++ + 
Sbjct: 649 RRDELLAEE 657


>gi|159491478|ref|XP_001703692.1| chaperonin 60A [Chlamydomonas reinhardtii]
 gi|158270541|gb|EDO96383.1| chaperonin 60A [Chlamydomonas reinhardtii]
          Length = 580

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  ++E+ SV    KL+E  A +S  ++ I +    + E +D    I D 
Sbjct: 373 DEIEMRIAQLKKELAETDSVYDTEKLSERIAKLSGGVAVIKVGAATEAELEDRKLRIEDA 432

Query: 70  NS 71
            +
Sbjct: 433 KN 434


>gi|146172977|ref|XP_001018708.2| hypothetical protein TTHERM_00290910 [Tetrahymena thermophila]
 gi|146144917|gb|EAR98463.2| hypothetical protein TTHERM_00290910 [Tetrahymena thermophila
           SB210]
          Length = 890

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M+  S K+I   +N+  +++  +          +L +E   +     KI + +Q+K   Q
Sbjct: 119 MIMKSQKKIDMQENKIEDLQQELEYQK--QNVDQLNKERQKLKQETQKIQMIEQQKNLVQ 176

Query: 61  DLHT 64
             + 
Sbjct: 177 SNYE 180


>gi|227510674|ref|ZP_03940723.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227189795|gb|EEI69862.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 652

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS----PIISKISIYDQKKQEEQD 61
             Q+ +L      IE +M++    +   K ++    +      I    S ++QK  + +D
Sbjct: 591 ESQLDELSKSKNNIENQMAQPEVFNDLDKASDLQKKLEMVDQEIKETESKWEQKSLQLED 650

Query: 62  LH 63
           + 
Sbjct: 651 IE 652


>gi|148909901|gb|ABR18037.1| unknown [Picea sitchensis]
          Length = 598

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+I+  ++E+ SV    KL+E  A +S  ++ I +    + E +D    I D 
Sbjct: 396 DEIQARIAQIKKELAETDSVYDTEKLSERIAKLSGGVAVIKVGATTEAELEDKQLRIEDA 455

Query: 70  NS 71
            +
Sbjct: 456 KN 457


>gi|2493647|sp|Q42694|RUBA_CHLRE RecName: Full=RuBisCO large subunit-binding protein subunit alpha,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           alpha; AltName: Full=CPN-60 alpha; Flags: Precursor
 gi|603913|gb|AAA98642.1| chaperonin alpha-like subunit [Chlamydomonas reinhardtii]
          Length = 580

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  ++E+ SV    KL+E  A +S  ++ I +    + E +D    I D 
Sbjct: 373 DEIEMRIAQLKKELAETDSVYDTEKLSERIAKLSGGVAVIKVGAATEAELEDRKLRIEDA 432

Query: 70  NS 71
            +
Sbjct: 433 KN 434


>gi|326674132|ref|XP_698830.5| PREDICTED: pleckstrin homology-like domain family B member 1-like
            [Danio rerio]
          Length = 1713

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 8    QICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQDLHT 64
            ++ +LK R  E+E ++ ES       +     E  A +  I ++  I +Q +++  +L +
Sbjct: 937  KVDELKARITELEQQLQESKQEAEMERALLQGERQAEMEQIETETEIINQLQRKLTELES 996

Query: 65   VIGDHNSDS 73
             I       
Sbjct: 997  SIQREKDKE 1005


>gi|224475860|ref|YP_002633466.1| putative ABC transporter ATP-binding protein [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420467|emb|CAL27281.1| putative ABC transporter ATP-binding protein [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 623

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           ++I + + R  EIE  M ++   D Y K+    +    + S+      +  E ++L  
Sbjct: 567 ERIEEAEIRLEEIEQEMVDAS--DDYTKIQTLNSEKETLESQYDQDMTRWSELEELKE 622


>gi|302840740|ref|XP_002951916.1| hypothetical protein VOLCADRAFT_105311 [Volvox carteri f.
           nagariensis]
 gi|300262817|gb|EFJ47021.1| hypothetical protein VOLCADRAFT_105311 [Volvox carteri f.
           nagariensis]
          Length = 536

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  ++E+ SV    KL+E  A +S  ++ I +    + E +D    I D 
Sbjct: 329 EEIEMRIAQLKKELAETDSVYDTEKLSERIAKLSGGVAVIKVGAATEAELEDRKLRIEDA 388

Query: 70  NS 71
            +
Sbjct: 389 KN 390


>gi|302783859|ref|XP_002973702.1| hypothetical protein SELMODRAFT_99807 [Selaginella moellendorffii]
 gi|302787967|ref|XP_002975753.1| hypothetical protein SELMODRAFT_104038 [Selaginella moellendorffii]
 gi|300156754|gb|EFJ23382.1| hypothetical protein SELMODRAFT_104038 [Selaginella moellendorffii]
 gi|300158740|gb|EFJ25362.1| hypothetical protein SELMODRAFT_99807 [Selaginella moellendorffii]
          Length = 546

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  ++E+ SV    KL+E  A +S  ++ I +    + E +D    I D 
Sbjct: 344 DEIQARIAQLKKELAETDSVYDTEKLSERIAKLSGGVAVIKVGAATEVELEDRKLRIEDA 403

Query: 70  NS 71
            +
Sbjct: 404 KN 405


>gi|85708035|ref|ZP_01039101.1| ABC transporter [Erythrobacter sp. NAP1]
 gi|85689569|gb|EAQ29572.1| ABC transporter [Erythrobacter sp. NAP1]
          Length = 557

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L  RF  +  +M+E  +   +  L +E A +   I  +  +     + +     +   
Sbjct: 100 AELVERFNAVSAQMAEPDA--DFDALGDEMAELQTKIDAVDGW-TLDNQLEIAMEALRCP 156

Query: 70  NSDSEIRD 77
            SD+ + +
Sbjct: 157 PSDASVEN 164


>gi|315050003|ref|XP_003174376.1| hypothetical protein MGYG_04548 [Arthroderma gypseum CBS 118893]
 gi|311342343|gb|EFR01546.1| hypothetical protein MGYG_04548 [Arthroderma gypseum CBS 118893]
          Length = 2339

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  +S     DA  K+          I+ +      +    D
Sbjct: 2056 IMVLQDQLQQREGRIEELEQELSTMDR-DAPAKI----KEKETEINWLRELLSVR--LDD 2108

Query: 62   LHTVI 66
            L  +I
Sbjct: 2109 LRDLI 2113


>gi|291571204|dbj|BAI93476.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 2350

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 41/150 (27%), Gaps = 4/150 (2%)

Query: 1    MVFLSHKQICDLKNRFAEIE-LRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
            +  L+  Q   + N   +++   M E    +   +L E+ A +  +       ++   E 
Sbjct: 885  LKMLADDQADSMAN-LKDLKRKEMQEITLKNEKQELEEKLAGLKDLELIRRRVNELIVEI 943

Query: 60   QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
            QDL   I + N  S            +            + +L  D       I    + 
Sbjct: 944  QDLE--IQEKNCKSNYDYEVNNPFNYVCHIQTTYNGWFCHYVLLYDYSGSFPTIRMSPSS 1001

Query: 120  TGGSEAALFVGDLFRMYERYAALRKWKVEV 149
            +G      F       Y        W    
Sbjct: 1002 SGAGGKWKFNKISQEYYTIQTTYNGWFCHY 1031


>gi|225180872|ref|ZP_03734320.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168353|gb|EEG77156.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
          Length = 641

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 25/63 (39%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           +  + ++I  ++ R  E+E  ++     + Y   +E+   +  + + +       +E   
Sbjct: 577 ILETEEEISRVEERINELEAELACPEVFEDYKLASEKGQEMEELKAMLEKLFASWEEYTI 636

Query: 62  LHT 64
           L  
Sbjct: 637 LLE 639


>gi|239906239|ref|YP_002952979.1| putative ABC transporter ATP-binding protein [Desulfovibrio
           magneticus RS-1]
 gi|239796104|dbj|BAH75093.1| putative ABC transporter ATP-binding protein [Desulfovibrio
           magneticus RS-1]
          Length = 666

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHT 64
           +  L  + +E+E  M++  +      + KL++EY+ +S      ++     ++E  DL  
Sbjct: 598 LETLLAKQSEVEAVMADPETYAQRELFSKLSKEYSDLSREAEDLLARMAVMEEEIADLEA 657


>gi|119946803|ref|YP_944483.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37]
 gi|119865407|gb|ABM04884.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37]
          Length = 638

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 3   FLSHKQI-CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ- 60
             S +++   L  +  EIE ++++    +   K     A ++ ++ +     +  +E + 
Sbjct: 564 LSSSEKLMEKLSQQLEEIEKQLADPALYEHAQK-----ARLTELLKQQGELKESLEEAEM 618

Query: 61  ---DLHTVIGDHNSDSE 74
              D    I    ++ E
Sbjct: 619 AWMDAQEKIELMEAEFE 635


>gi|55981833|ref|YP_145130.1| S-layer protein-like protein [Thermus thermophilus HB8]
 gi|55773246|dbj|BAD71687.1| S-layer protein-related protein [Thermus thermophilus HB8]
          Length = 439

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 44/156 (28%), Gaps = 8/156 (5%)

Query: 9   ICDLKNRFAEIELR-MSESPSVDAYIKLTEEYA-AISPIISKI----SIYDQKKQEEQDL 62
           +  L+ R   +E R  ++   V+A  +  EE    +  +            + ++  +DL
Sbjct: 180 LKTLEERLKALEARPQADPKEVEALRRAQEELKGRLEALEKARSAQEEALRRLEEALKDL 239

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
                      +     +  +   E+ +  LEN +  L       +      + R     
Sbjct: 240 PEATRLAQEAQDRLQALEPRLQRAEEGLEALENRVRSLEERLKALEAAQAQDQARLKALE 299

Query: 123 SEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDG 158
            E A     L     R        +       +  G
Sbjct: 300 EEVAALKRAL--TPSRLPLHLGLALYQGDVQRDWHG 333


>gi|193216773|ref|YP_002000015.1| massive surface protein MspC [Mycoplasma arthritidis 158L3-1]
 gi|193002096|gb|ACF07311.1| massive surface protein MspC [Mycoplasma arthritidis 158L3-1]
          Length = 2719

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 26/55 (47%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
            +++ + K+   E++ +++++ +     +LT+E   +  +  K+   +      +
Sbjct: 712 KERLDNAKSELEELKKKINDAYNDRNLEELTKELNKLEELKEKVESLETLATAVE 766


>gi|171689886|ref|XP_001909882.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944905|emb|CAP71016.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1341

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 6/133 (4%)

Query: 6   HKQICDLKNRFAEIELR-MSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDLH 63
            K+I DLK +   +E + + +   ++   K+  E      II  +   Y  ++QE  DL 
Sbjct: 317 QKEIEDLKAKLRVLEKKRIEDREKLNNLEKIKGERDKFERIIQTLQIKYQPQQQEIADLR 376

Query: 64  TVIGDHNSD----SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             + +  +      E+++  +  +     +    E     L +  +    KS  LE+   
Sbjct: 377 KQLKEAETRFYAVEEMQESHESALELATLDREMAEETAEVLKVELEALKQKSEELELEVE 436

Query: 120 TGGSEAALFVGDL 132
               E A F   +
Sbjct: 437 ILREENAEFTKGM 449


>gi|213853036|ref|ZP_03382568.1| hypothetical protein SentesT_09356 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 595

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 8/157 (5%)

Query: 9   ICDLKNRFAEIELRMSES-------PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           +  +  R  E+    S+S        + D Y  L +    ++  I+ +    +  +E  +
Sbjct: 353 LEAVNKRLQELNKERSKSLSYISCVSAFDKYRDLNKYLIDLTVEINALKQKLEVSREIGE 412

Query: 62  LHTVIGDHNSDS-EIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           L  VI D   +  +I    +I    + K    + + I  +      +      L      
Sbjct: 413 LKEVITDKQQEKNDIVKSIKINRDYVVKTPGNIYSNIKEMFKVFVKNVLDKNGLLTTEQN 472

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
                  + G +    ++ +       + +     D 
Sbjct: 473 KEGHLEYWAGLVNNQGQQTSESDGHSYQKILCMGYDI 509


>gi|84468288|dbj|BAE71227.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
           pratense]
          Length = 578

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L++R A+++  +SE+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 376 DELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 435

Query: 70  NS 71
            +
Sbjct: 436 KN 437


>gi|84468456|dbj|BAE71311.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
           pratense]
          Length = 588

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L++R A+++  +SE+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 386 DELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 445

Query: 70  NS 71
            +
Sbjct: 446 KN 447


>gi|84468438|dbj|BAE71302.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
           pratense]
          Length = 588

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L++R A+++  +SE+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 386 DELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 445

Query: 70  NS 71
            +
Sbjct: 446 KN 447


>gi|84468296|dbj|BAE71231.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
           pratense]
 gi|84468304|dbj|BAE71235.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
           pratense]
 gi|84468426|dbj|BAE71296.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
           pratense]
          Length = 588

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L++R A+++  +SE+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 386 DELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 445

Query: 70  NS 71
            +
Sbjct: 446 KN 447


>gi|84468442|dbj|BAE71304.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
           pratense]
          Length = 461

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L++R A+++  +SE+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 259 DELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 318

Query: 70  NS 71
            +
Sbjct: 319 KN 320


>gi|156050175|ref|XP_001591049.1| hypothetical protein SS1G_07674 [Sclerotinia sclerotiorum 1980]
 gi|154692075|gb|EDN91813.1| hypothetical protein SS1G_07674 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 631

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 42/142 (29%), Gaps = 6/142 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +S ++I  L+     ++  M+        + L      +  +   +    Q         
Sbjct: 242 VSVERIKTLRKELEGLDKEMAVGGL--KIVNLQRRRENLKQLNDAVQQLKQVVNAVASCE 299

Query: 64  TVIG----DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +++     +   D+       I    +  +  + + ++  L            +  +R  
Sbjct: 300 SMVENGEVEEALDAIDALEKLIAGEEMTSKPGQQKIQLRDLRGATALQGVNHDLDVLRFR 359

Query: 120 TGGSEAALFVGDLFRMYERYAA 141
            G S  A F+  L     R+  
Sbjct: 360 IGKSFEARFLQALLGDLRRHVE 381


>gi|289618213|emb|CBI54937.1| unnamed protein product [Sordaria macrospora]
          Length = 489

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 1/115 (0%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPII-SKISIYDQKKQEEQDLHT 64
            KQI  LK +  EI+  + +  +     K  +  A +  I   +   Y        +   
Sbjct: 170 QKQIDVLKAKIKEIKDSLEDPEAKALSEKYNKLQAELDAIKAEQDEAYKNLSSLRDERTK 229

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           +    +   +     + E    +KE  + E E       +   + +    E R  
Sbjct: 230 LQQLQSEKYQAIKKLKDEYYGAKKEFAKWEREQREKYRERQQAERERIAKERRME 284


>gi|307103264|gb|EFN51526.1| hypothetical protein CHLNCDRAFT_59237 [Chlorella variabilis]
          Length = 539

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++K R A+I+  ++E+ SV    KL+E  A ++  ++ I +    + E +D    I D 
Sbjct: 331 DEIKARIAQIKKELAETDSVYDTEKLSERIAKLAGGVAVIKVGAATEAELEDRKLRIEDA 390

Query: 70  NS 71
            +
Sbjct: 391 KN 392


>gi|296243002|ref|YP_003650489.1| chromosome segregation ATPase [Thermosphaera aggregans DSM 11486]
 gi|296095586|gb|ADG91537.1| Chromosome segregation ATPase [Thermosphaera aggregans DSM 11486]
          Length = 1057

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 38/85 (44%), Gaps = 14/85 (16%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQ------------ 54
           +++ ++++R +E+E +++     +    LT+E A +  +I ++S   Q            
Sbjct: 826 QRLSEIEDRLSELESQLASIE--NRIEGLTQEIALLQGMIDELSQQLQLVNTTLNGEISL 883

Query: 55  KKQEEQDLHTVIGDHNSDSEIRDLA 79
            +Q  Q+L  +I +     +  +  
Sbjct: 884 LEQRIQELEQLISELRQQFDYLNSQ 908


>gi|227513690|ref|ZP_03943739.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227083009|gb|EEI18321.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus buchneri ATCC 11577]
          Length = 652

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQD 61
             Q+ +L      IE +M++    +   K ++    +  I  KI      ++QK  + +D
Sbjct: 591 ESQLDELSKSKNNIESQMAQPEVFNDLDKASDLQKKLEMIDQKIKETESKWEQKSLQLED 650

Query: 62  LH 63
           + 
Sbjct: 651 IE 652


>gi|145514834|ref|XP_001443322.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410700|emb|CAK75925.1| unnamed protein product [Paramecium tetraurelia]
          Length = 269

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 45/112 (40%), Gaps = 1/112 (0%)

Query: 8   QICDLKNRFAEIELRM-SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++ +L+NR  E+E +  ++  + D   +L++ Y+ I  +++ I I   + Q+ Q+     
Sbjct: 112 KVQELQNRIKELEAQQQNKQDNEDEESELSQAYSQIQQLVNTIKILQDEIQQLQEKLEQK 171

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
            +     + +   + + +    +  +  +           +  K    E+  
Sbjct: 172 QNVIDGYDRQIQDKDKEIEEANQYIQELHGQLEEQTTNVEEKHKYLFDEVNT 223


>gi|116878616|ref|YP_357940.2| putative peptide chain release factor [Pelobacter carbinolicus DSM
           2380]
 gi|114843252|gb|ABA89770.2| putative peptide chain release factor [Pelobacter carbinolicus DSM
           2380]
          Length = 138

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLR 268
            +    + I  +D+ I   +A G GGQH N T++AVRI H P+GI VT+SE+   Q  + 
Sbjct: 26  PSRNGVMTINKQDLDITFFKAGGPGGQHRNKTETAVRIHHRPSGITVTASERRSRQANIE 85

Query: 269 AMKVLRARLYDVERKRMANERS 290
                 A+  +  R++     +
Sbjct: 86  HALERLAQRLEAMRRKPRRRIA 107


>gi|320531251|ref|ZP_08032230.1| ATP-binding cassette protein, ChvD family [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|320136518|gb|EFW28487.1| ATP-binding cassette protein, ChvD family [Actinomyces sp. oral
           taxon 171 str. F0337]
          Length = 560

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M++  +   +  L  E   +   +   + +D    + +     +  
Sbjct: 96  IKSKLDRFNEISAAMADPDA--DFDALMAEMGTLQDALDAANAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSEIRD 77
              D+E+++
Sbjct: 153 PPPDAEVKN 161


>gi|123427528|ref|XP_001307273.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121888892|gb|EAX94343.1| conserved hypothetical protein [Trichomonas vaginalis G3]
          Length = 580

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 6   HKQICDLKNRFAE---------------IELRMSESPSVDAYIKLTEEYA-AISPIISKI 49
            K++  L+ R+ E               +E    +   ++   KL ++    I+PI S++
Sbjct: 197 QKKVDALQQRYDELLTKFDETPKQREYFLEYMSQQHEFLEERAKLEKKLNVEIAPIKSEV 256

Query: 50  SIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
               +K Q ++D   ++ +        +    +    +++ +  E   +     K  DD 
Sbjct: 257 EGLVKKIQLQKDTERLLEEAEKHRHQNESNSKKQKKGKEQPKHEEPSKHNKPQGKPADDQ 316

Query: 110 KSCI 113
           +  +
Sbjct: 317 EEMM 320


>gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
 gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
          Length = 192

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLR 268
                  I   +I    ++ SG GGQ +N T SAV++ HIPT  +V   + +SQ QNR  
Sbjct: 42  QMPPRPTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKI 101

Query: 269 AMKVLRARLYDVERKRM 285
           A ++L  ++  +E+   
Sbjct: 102 AKRILAEKIELLEKGEQ 118


>gi|1351030|sp|P21239|RUB1_BRANA RecName: Full=RuBisCO large subunit-binding protein subunit alpha,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           alpha; AltName: Full=CPN-60 alpha; Flags: Precursor
 gi|289365|gb|AAA32979.1| 60-kDa chaperonin-60 alpha-polypeptide precursor [Brassica napus]
          Length = 546

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R ++++  +SE+ SV    KL E  A ++  ++ I +    + E +D    I D 
Sbjct: 344 DELQARISQLKKELSETDSVYDSEKLAERIAKLAGGVAVIKVGAATETELEDRKLRIEDA 403

Query: 70  NS 71
            +
Sbjct: 404 KN 405


>gi|255587664|ref|XP_002534347.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
 gi|223525447|gb|EEF28034.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
          Length = 501

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  ++E+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 384 DELQARIAQLKRELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 443

Query: 70  NS 71
            +
Sbjct: 444 KN 445


>gi|5650721|emb|CAB51619.1| unnamed protein product [Ricinus communis]
          Length = 496

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  ++E+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 327 DELQARIAQLKRELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 386

Query: 70  NS 71
            +
Sbjct: 387 KN 388


>gi|134101|sp|P08824|RUBA_RICCO RecName: Full=RuBisCO large subunit-binding protein subunit alpha;
           AltName: Full=60 kDa chaperonin subunit alpha; AltName:
           Full=CPN-60 alpha
          Length = 495

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  ++E+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 327 DELQARIAQLKRELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 386

Query: 70  NS 71
            +
Sbjct: 387 KN 388


>gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14]
          Length = 152

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 1/100 (1%)

Query: 207 LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQN 265
           L +          ED+    ++ SG GGQ +N   + V + H PTGI V     +    N
Sbjct: 26  LFQTRNFASAFREEDLNEQFVKGSGKGGQKINKVRNCVLLKHSPTGIQVRCQKTRCLDDN 85

Query: 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
           R  A K+L  +L D+     +      +K+Q    +R  +
Sbjct: 86  RRIARKLLTEKLDDLYNGEKSVRNQKIQKIQKRKANRRAK 125


>gi|255556733|ref|XP_002519400.1| peptide chain release factor, putative [Ricinus communis]
 gi|223541467|gb|EEF43017.1| peptide chain release factor, putative [Ricinus communis]
          Length = 185

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 219 LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNR 266
           +    +DT +ASG GGQH N  +SAVRI H+PTGI+     ++SQH+NR
Sbjct: 1   MRQCEMDTYKASGPGGQHRNKRESAVRIKHLPTGIISQAVEDRSQHKNR 49


>gi|193216694|ref|YP_001999936.1| massive surface protein MspB [Mycoplasma arthritidis 158L3-1]
 gi|193002017|gb|ACF07232.1| massive surface protein MspB [Mycoplasma arthritidis 158L3-1]
          Length = 1934

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 27/55 (49%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
            +Q+ + K+   +++ ++S++ +     +LT+E   +  +  K+   +    + +
Sbjct: 712 KEQLDNAKSELEDLKKKISDAYNNRNLKELTKELNKLEQLKEKVESLETLATKVE 766


>gi|134102|sp|P08823|RUBA_WHEAT RecName: Full=RuBisCO large subunit-binding protein subunit alpha,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           alpha; AltName: Full=CPN-60 alpha; Flags: Precursor
 gi|1345582|emb|CAA30699.1| unnamed protein product [Triticum aestivum]
          Length = 543

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  +SE+ S+    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 340 DEIQARVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGATTETELEDRQLRIEDA 399

Query: 70  NS 71
            +
Sbjct: 400 KN 401


>gi|227522520|ref|ZP_03952569.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227090342|gb|EEI25654.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus hilgardii ATCC 8290]
          Length = 648

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQD 61
             Q+ +L      IE +M++    +   K ++    +  I  KI      ++QK  + +D
Sbjct: 587 ESQLDELSKSKNNIESQMAQPEVFNDLDKASDLQKKLEMIDQKIKETESKWEQKSLQLED 646

Query: 62  LH 63
           + 
Sbjct: 647 IE 648


>gi|294648697|ref|ZP_06726157.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Acinetobacter haemolyticus ATCC 19194]
 gi|292825372|gb|EFF84115.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Acinetobacter haemolyticus ATCC 19194]
          Length = 642

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 8   QICDLKNRFAEIELRMSESPSV-----DAYIKLTEEYAAISPIISKISI-YDQKKQEEQD 61
           QI  ++ R  +IE  +++S        D  IKL  E + +   + +          E ++
Sbjct: 576 QIEKIQPRLVDIEHALADSALYEANRKDDLIKLMNEQSELKNKLEQYEEQLLTFMMELEE 635

Query: 62  LHT 64
           L  
Sbjct: 636 LEA 638


>gi|226952835|ref|ZP_03823299.1| ABC transporter ATP-binding protein [Acinetobacter sp. ATCC 27244]
 gi|226836456|gb|EEH68839.1| ABC transporter ATP-binding protein [Acinetobacter sp. ATCC 27244]
          Length = 642

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 8   QICDLKNRFAEIELRMSESPSV-----DAYIKLTEEYAAISPIISKISI-YDQKKQEEQD 61
           QI  ++ R  +IE  +++S        D  IKL  E + +   + +          E ++
Sbjct: 576 QIEKIQPRLVDIEHALADSALYEANRKDDLIKLMNEQSELKNKLEQYEEQLLTFMMELEE 635

Query: 62  LHT 64
           L  
Sbjct: 636 LEA 638


>gi|289580540|ref|YP_003479006.1| Patched family protein [Natrialba magadii ATCC 43099]
 gi|289530093|gb|ADD04444.1| Patched family protein [Natrialba magadii ATCC 43099]
          Length = 1131

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 12/114 (10%)

Query: 4   LSHKQICDLKNRFAEIEL---RMSESPS-----VDAYIKLTEEYAAISPIISKIS-IYDQ 54
           ++ +Q  DL+ R AE+E     + E+ +     +D   ++  E   +S    +    Y +
Sbjct: 142 ITTEQAADLEERGAELEQREGELEETSAQLEAGIDDAREIQREQEQLSATYDEDDPEYQE 201

Query: 55  KKQEEQDLHTVIGDH---NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKD 105
              E ++ +  + D      D E  +  +           +L         P++
Sbjct: 202 GVAELENEYDALLDEVTAGLDDEQAEEYEEFADQARFLESQLFQIEQQAENPEE 255


>gi|302419335|ref|XP_003007498.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261353149|gb|EEY15577.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 2491

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +  +Q+   + R  E+E  + +    +A  K+++        I+ +      +    D
Sbjct: 2216 IMVLQEQLQAREQRIEELEQNIEKLD-PEAPTKISKR----DDEITWLRELLAVR--HAD 2268

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEIN 98
            L  +I   + +   R+  +   + ++  ++  E E  
Sbjct: 2269 LQDIIAALSGEDYNREAVKDAAIRLKANLQMEEQERE 2305


>gi|281599646|gb|ADA72630.1| putative peptide chain release factor H [Shigella flexneri 2002017]
 gi|313646632|gb|EFS11091.1| putative peptide chain release factor H [Shigella flexneri 2a str.
           2457T]
 gi|332761634|gb|EGJ91914.1| putative peptide chain release factor H [Shigella flexneri 4343-70]
 gi|332761778|gb|EGJ92057.1| putative peptide chain release factor H [Shigella flexneri 2747-71]
 gi|332764451|gb|EGJ94684.1| putative peptide chain release factor H [Shigella flexneri K-671]
 gi|332768583|gb|EGJ98765.1| putative peptide chain release factor H [Shigella flexneri 2930-71]
 gi|333008731|gb|EGK28195.1| putative peptide chain release factor H [Shigella flexneri K-218]
 gi|333009717|gb|EGK29167.1| putative peptide chain release factor H [Shigella flexneri VA-6]
 gi|333010787|gb|EGK30213.1| putative peptide chain release factor H [Shigella flexneri K-272]
 gi|333021285|gb|EGK40538.1| putative peptide chain release factor H [Shigella flexneri K-227]
 gi|333022100|gb|EGK41343.1| putative peptide chain release factor H [Shigella flexneri K-304]
          Length = 131

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 5/123 (4%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 68

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY 278
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V   SE+SQH N+  A  ++  +L 
Sbjct: 69  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLD 128

Query: 279 DVE 281
             +
Sbjct: 129 QQQ 131


>gi|298249625|ref|ZP_06973429.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM
           44963]
 gi|297547629|gb|EFH81496.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM
           44963]
          Length = 118

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 211 AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRA 269
             ID D    D  I+   A G GGQH N  +S VR+ H P+G +V  +  +SQ+ NR  A
Sbjct: 6   YPIDRDSLERDCTIEFFIAGGPGGQHRNKVESGVRLIHRPSGQVVTATERRSQYANREMA 65

Query: 270 MKVLRARL 277
            + + ARL
Sbjct: 66  FERMAARL 73


>gi|164427433|ref|XP_955770.2| hypothetical protein NCU03483 [Neurospora crassa OR74A]
 gi|166951800|sp|Q01397|DYNA_NEUCR RecName: Full=Dynactin, 150 kDa isoform; AltName: Full=150 kDa
           dynein-associated polypeptide; Short=DAP-150;
           Short=DP-150; AltName: Full=p150-glued
 gi|157071741|gb|EAA26534.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1367

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 5   SHKQICDLKNRFAEIELR-MSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDL 62
            +K+I DLK +   +E + M +   +++  K+  E      II  +   Y  ++QE QDL
Sbjct: 327 MNKEIEDLKAKLKVLEKKRMEDREKLNSLEKVKAERDKFERIIQTLQIKYQPQQQEIQDL 386

Query: 63  HTVIGDHNS 71
              + +  +
Sbjct: 387 KRQLKEAEN 395


>gi|315649239|ref|ZP_07902328.1| ABC transporter related protein [Paenibacillus vortex V453]
 gi|315275227|gb|EFU38596.1| ABC transporter related protein [Paenibacillus vortex V453]
          Length = 650

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +QI  L++  +E+E  M+       Y+ L E   ++          +Q   E + L  
Sbjct: 594 EEQIHTLESEISELETEMTLPEIYQDYMALQERQQSLEEKK---RQLEQIFAEWESLLE 649


>gi|296816515|ref|XP_002848594.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238839047|gb|EEQ28709.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 2262

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+EL +S     DA  K+          I+ +      +    D
Sbjct: 1982 IMVLQDQLQQREGRIEELELELSTIDR-DAPAKI----KEKETEINWLRELLSVR--LDD 2034

Query: 62   LHTVI 66
            L  +I
Sbjct: 2035 LKDLI 2039


>gi|271961827|ref|YP_003336023.1| peptide chain release factor-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270505002|gb|ACZ83280.1| peptide chain release factor-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 219

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 2/121 (1%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
           Y+ ++  ISG G  +     +G    Q      A          +A   +          
Sbjct: 52  YRSVLIQISGAGAEAFAASWTGTLCWQAPSPYRAGTGRKNWYV-IAQPCQVDTPRTTFAE 110

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLY 278
            D+ I   R  G GGQH N   +AVR TH P+GI+V    E+    NR  AM++LR R+ 
Sbjct: 111 ADVDIVACRTGGPGGQHRNKASTAVRATHRPSGIVVVVDTERQFSLNRRIAMRLLRQRIE 170

Query: 279 D 279
           D
Sbjct: 171 D 171


>gi|310792262|gb|EFQ27789.1| nuclear segregation protein [Glomerella graminicola M1.001]
          Length = 477

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 1/117 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI-YDQKKQEEQDLH 63
           S KQI DLK +  EI+  M +  +     +  +  A +  I ++    Y        +  
Sbjct: 175 SQKQIDDLKAKIKEIKDSMEDPEAKAMSEQYNKIQAELDVIKAEGDEAYKNLSSLRDERS 234

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            +    N   +     + E     K  +  E E       +   + +    E +   
Sbjct: 235 RLHNLQNEKYQAVKTIKDEYWQQRKAAQSYEREAREKARERRKAEQERYQKERKKAD 291


>gi|289614125|emb|CBI61494.1| unnamed protein product [Sordaria macrospora]
          Length = 1366

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 6/134 (4%)

Query: 5   SHKQICDLKNRFAEIELR-MSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDL 62
            +K+I DLK +   +E + M +   ++   K+  E      II  +   Y  ++QE QDL
Sbjct: 330 MNKEIEDLKAKLKVLEKKRMEDREKLNGLEKVKAERDKFERIIQTLQIKYQPQQQEIQDL 389

Query: 63  HTVIGDHN----SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
              + +      +  E++      +     +    E     L +  D    K+  LE+  
Sbjct: 390 KRQLKEAETRLYNVEEMQAEHDTAMELATLDREMAEETAEVLKVELDALRQKTEELELEV 449

Query: 119 GTGGSEAALFVGDL 132
                E + F   +
Sbjct: 450 EVLREENSEFTNGM 463


>gi|139437086|ref|ZP_01771246.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC
           25986]
 gi|133776733|gb|EBA40553.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC
           25986]
          Length = 132

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 207 LPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQN 265
               AE+ V+    D  +   RA+G GGQ VNTTDSAVR+ H PTGI+V     +SQ QN
Sbjct: 17  YAHYAEMSVEELARDCEVQVFRATGPGGQGVNTTDSAVRMKHGPTGIVVTARESRSQFQN 76

Query: 266 RLRAMKVLRARL 277
           R   ++ LRA L
Sbjct: 77  RSCCLRKLRAEL 88


>gi|71415588|ref|XP_809856.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70874300|gb|EAN88005.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 678

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/184 (9%), Positives = 42/184 (22%), Gaps = 1/184 (0%)

Query: 114 LEIRAGTGGSEAALF-VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            ++     G+    +    L    +             +  D D             + +
Sbjct: 411 CDMNTKNDGATGCAWSAHGLLTALDFTQKDDALPWMQQNFGDVDVASVLRWARFYHSKDL 470

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGS 232
            ++ +       V  +        +   A    +               +   T  A   
Sbjct: 471 MAKDRPRYLARAVAWIELLSKRSHMMEEAPLTYMRKSKPLSLNTNSNLRVAWQTPVARPD 530

Query: 233 GGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           G   +   +      H      VT + +   +        ++    +V  K    E  A 
Sbjct: 531 GPPRLLAREEGYTFHHNEHSRFVTETYRHPGETLQSRFLAMQPIHTEVSAKEDFQEIYAQ 590

Query: 293 RKLQ 296
           ++ Q
Sbjct: 591 QQEQ 594


>gi|209965350|ref|YP_002298265.1| putative ABC transporter ATP-binding protein [Rhodospirillum
           centenum SW]
 gi|209958816|gb|ACI99452.1| ABC transporter, ATP-binding protein, putative [Rhodospirillum
           centenum SW]
          Length = 559

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYD 53
             L +RF E+   M++  +   +  L  E A +   I   + ++
Sbjct: 100 KALLDRFNEVSNLMADPDA--DFDTLLAEQADLQEKIDAANAWE 141


>gi|118581948|ref|YP_903198.1| class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
 gi|118504658|gb|ABL01141.1| Class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
          Length = 109

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 3/79 (3%)

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           +I  EDIRI+  RASG GGQH NTTDSAVRI H+PTGI+   S  +SQ +NR RAM+ L 
Sbjct: 6   EIREEDIRIEYYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQSRNRERAMERLT 65

Query: 275 ARLYDVERKRMANERSANR 293
           A L   +R+R+  +R A R
Sbjct: 66  AAL--EKRERVVKKRIATR 82


>gi|149912151|ref|ZP_01900736.1| ABC transporter, ATP-binding protein [Moritella sp. PE36]
 gi|149804772|gb|EDM64816.1| ABC transporter, ATP-binding protein [Moritella sp. PE36]
          Length = 636

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 5/58 (8%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           ++  L+     ++  +++    +     T+  A +  + +K    +      ++L  +
Sbjct: 579 KMEQLEELVETLQAEINQPDFFNKPADETK--AMLENLANKEQELETAFARWEELEEM 634


>gi|110224569|emb|CAJ98782.1| peptide release factor protein 2 [Francisella novicida]
 gi|259236249|gb|ACW20342.1| PrfB [Francisella sp. FnSp1]
          Length = 101

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 40/108 (37%), Gaps = 10/108 (9%)

Query: 25  ESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQI 81
           +    D       L ++   +  ++       +  Q   +L  +  +   D  +      
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLQTLTELIDLAEE---DESLMQEIAK 57

Query: 82  EVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
           +   +  EI +LE    +  +     D  +  L+I++G+GG+EA  + 
Sbjct: 58  DTQDVASEIEKLE----FRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|12719433|ref|NP_075504.1| hypothetical protein phiSLTp42 [Staphylococcus phage phiSLT]
 gi|21283127|ref|NP_646215.1| hypothetical protein MW1398 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49483693|ref|YP_040917.1| hypothetical protein SAR1516 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49485841|ref|YP_043062.1| hypothetical protein SAS0935 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651297|ref|YP_185262.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus subsp. aureus COL]
 gi|66395517|ref|YP_239859.1| ORF009 [Staphylococcus phage 42E]
 gi|66395666|ref|YP_240005.1| ORF010 [Staphylococcus phage 47]
 gi|87161729|ref|YP_494098.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88195248|ref|YP_500051.1| hypothetical protein SAOUHSC_01535 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|215401149|ref|YP_002332404.1| major head protein [Staphylococcus phage phiSauS-IPLA35]
 gi|253315474|ref|ZP_04838687.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|284024508|ref|ZP_06378906.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus 132]
 gi|295428017|ref|ZP_06820649.1| hypothetical protein SIAG_00543 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296276331|ref|ZP_06858838.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus MR1]
 gi|12697863|dbj|BAB21735.1| unnamed protein product [Staphylococcus phage phiSLT]
 gi|21204567|dbj|BAB95263.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2]
 gi|49241822|emb|CAG40514.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244284|emb|CAG42711.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57285483|gb|AAW37577.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus subsp. aureus COL]
 gi|62636010|gb|AAX91121.1| ORF009 [Staphylococcus phage 42E]
 gi|62636090|gb|AAX91201.1| ORF010 [Staphylococcus phage 47]
 gi|87127703|gb|ABD22217.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87202806|gb|ABD30616.1| conserved hypothetical phage protein [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|215260500|gb|ACJ64630.1| gp41 [Staphylococcus phage phiSauS-IPLA35]
 gi|295128375|gb|EFG58009.1| hypothetical protein SIAG_00543 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|315128435|gb|EFT84443.1| hypothetical protein CGSSa03_13332 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315197737|gb|EFU28071.1| hypothetical protein CGSSa01_10798 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|329729407|gb|EGG65812.1| phage capsid family [Staphylococcus aureus subsp. aureus 21189]
 gi|329730628|gb|EGG67013.1| phage capsid family [Staphylococcus aureus subsp. aureus 21193]
          Length = 387

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 67/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K +++ 
Sbjct: 16  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDKG 75

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + D+    + +       +   +  +        L      +D     L  +  +
Sbjct: 76  EAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 135

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 136 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKAKGDTVKFTT 195

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 196 NKFKVFAAISDTVIHGSDVDLVNWVE 221


>gi|157150085|ref|YP_001450407.1| ABC transporter ATP-binding protein SP1553 [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157074879|gb|ABV09562.1| ABC transporter, ATP-binding protein SP1553 [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 621

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
              I  L+ R +EIE+ M E+     + +L++    +      ++ K   Y+
Sbjct: 566 EDDIEALEERISEIEVAMQENG--SDFARLSQLQKELDEQNEKLLEKYERYE 615


>gi|148553165|ref|YP_001260747.1| putative ABC transporter ATP-binding protein [Sphingomonas
           wittichii RW1]
 gi|148498355|gb|ABQ66609.1| ABC transporter related [Sphingomonas wittichii RW1]
          Length = 559

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 1/64 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + D+ +RF  I   M +      +  L EE   +   I     +     + +     +  
Sbjct: 99  VADMIDRFNAISAEMGDPKDDTDFDALMEEMGVLQEKIDAADGW-TLDNQLEIAMEALRC 157

Query: 69  HNSD 72
              D
Sbjct: 158 PPGD 161


>gi|325846946|ref|ZP_08169803.1| ABC transporter, ATP-binding protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481188|gb|EGC84232.1| ABC transporter, ATP-binding protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 566

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 1/108 (0%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           K +  L+    ++E++MSE  + D   ++ +EYA  S    K   Y   K E + +   +
Sbjct: 92  KDLISLEKNIRDLEVKMSEEKNPDKLDEIMKEYAKKSEEFEKKQGY-SYKSEIRGVLIGM 150

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
           G    D +              E+  L  +   L+L  +  +      
Sbjct: 151 GFEEEDFQKEVSLLSGGQKARVELACLLLQKPDLILLDEPTNHLDIKA 198


>gi|124516485|gb|EAY57993.1| putative helicase [Leptospirillum rubarum]
          Length = 1054

 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 4/71 (5%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M       + +L+ RF E +  M+     D     T E   +  I   +    +      
Sbjct: 812 MAMAGDDAVEELEGRFPERQFLMAHYALWDE----TPEKMGLERISETVQRLRKNPVLCD 867

Query: 61  DLHTVIGDHNS 71
           +L  ++     
Sbjct: 868 ELEEMLELAKD 878


>gi|29566685|ref|NP_818251.1| gp200 [Mycobacterium phage Bxz1]
 gi|109393384|ref|YP_656182.1| gp202 [Mycobacterium phage Catera]
 gi|29425410|gb|AAN16834.1| gp200 [Mycobacterium phage Bxz1]
 gi|91981206|gb|ABE67921.1| gp202 [Mycobacterium phage Catera]
          Length = 113

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYD 279
           D  ++T R  G+GGQ+ NT D+AVRI H P+G +  +  E+SQ QN+  A + +      
Sbjct: 8   DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAESSKF 67

Query: 280 VERKRMANERSANRKLQI 297
               +         K Q+
Sbjct: 68  QLWLKRQVANDDLIKAQV 85


>gi|281416112|ref|YP_003347848.1| gp198 [Mycobacterium phage ET08]
 gi|255927791|gb|ACU41412.1| gp198 [Mycobacterium phage ET08]
 gi|255928079|gb|ACU41698.1| gp203 [Mycobacterium phage LRRHood]
          Length = 136

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYD 279
           D  ++T R  G+GGQ+ NT D+AVRI H P+G +  +  E+SQ QN+  A + +      
Sbjct: 31  DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAESSKF 90

Query: 280 VERKRMANERSANRKLQI 297
               +         K Q+
Sbjct: 91  QLWLKRQVANDDLIKAQV 108


>gi|239621586|ref|ZP_04664617.1| ATP binding protein of ABC transporter [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|239515461|gb|EEQ55328.1| ATP binding protein of ABC transporter [Bifidobacterium longum
           subsp. infantis CCUG 52486]
          Length = 552

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 89  IAEKVARFNEIGEEMANPDA--DFDALMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 145

Query: 69  HNSDS 73
            + D+
Sbjct: 146 PDPDT 150


>gi|57640713|ref|YP_183191.1| hypothetical protein TK0778 [Thermococcus kodakarensis KOD1]
 gi|57159037|dbj|BAD84967.1| hypothetical protein, conserved, containing Toprim domain
           [Thermococcus kodakarensis KOD1]
          Length = 303

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 10/66 (15%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISK-ISIYDQKKQEEQD 61
               KQ+ D+K ++ E+          + Y  L +E+  +     +  S Y +   E + 
Sbjct: 128 MELRKQLLDIKGKYDEL---------ANEYEALYKEHEELQKKYDELYSEYKRLASENEG 178

Query: 62  LHTVIG 67
           L  ++ 
Sbjct: 179 LKELLE 184


>gi|210634150|ref|ZP_03298012.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279]
 gi|210158897|gb|EEA89868.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279]
          Length = 126

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY 278
            +  +   RASG GGQ VNTTDSAVR+ H+P+GI+V     +SQ QNR   ++ L+A L 
Sbjct: 24  RECEVQVFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCLRKLKAELE 83

Query: 279 DVER 282
              R
Sbjct: 84  RRAR 87


>gi|24111726|ref|NP_706236.1| peptide chain release factor 2 [Shigella flexneri 2a str. 301]
 gi|30061853|ref|NP_836024.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|24050507|gb|AAN41943.1| probable peptide chain release factor [Shigella flexneri 2a str.
           301]
 gi|30040097|gb|AAP15830.1| probable peptide chain release factor [Shigella flexneri 2a str.
           2457T]
          Length = 151

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 5/123 (4%)

Query: 160 YKEIVATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPL 219
            +  + ++ G   ++  +   G  +                   +         D     
Sbjct: 33  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI----GRFTADEQEQS 88

Query: 220 EDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLY 278
           + IR +T+R+SG GGQHVN TDSAVR TH+ +GI V   SE+SQH N+  A  ++  +L 
Sbjct: 89  DAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLD 148

Query: 279 DVE 281
             +
Sbjct: 149 QQQ 151


>gi|148267496|ref|YP_001246439.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393550|ref|YP_001316225.1| phage major capsid protein HK97 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|147740565|gb|ABQ48863.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946002|gb|ABR51938.1| phage major capsid protein HK97 [Staphylococcus aureus subsp.
           aureus JH1]
          Length = 387

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 67/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K +++ 
Sbjct: 16  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDKG 75

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + D+    + +       +   +  +        L      +D     L  +  +
Sbjct: 76  EAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 135

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 136 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKAKGDTVKFTT 195

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 196 NKFKVFAAISDTVIHGSDVDLVNWVE 221


>gi|213691460|ref|YP_002322046.1| ABC transporter related [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213522921|gb|ACJ51668.1| ABC transporter related [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320457532|dbj|BAJ68153.1| ABC transporter ATP-binding component [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 559

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IAEKVARFNEIGEEMANPDA--DFDALMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 152

Query: 69  HNSDS 73
            + D+
Sbjct: 153 PDPDT 157


>gi|203460691|ref|YP_002224425.1| gp204 [Mycobacterium phage Spud]
 gi|197312272|gb|ACH62628.1| gp204 [Mycobacterium phage Spud]
          Length = 113

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRARLYD 279
           D  ++T R  G+GGQ+ NT D+AVRI H P+G +  +  E+SQ QN+  A + +      
Sbjct: 8   DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAESSKF 67

Query: 280 VERKRMANERSANRKLQI 297
               +         K Q+
Sbjct: 68  QLWLKRQVANDDLIKAQV 85


>gi|289643618|ref|ZP_06475732.1| ABC transporter related protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506567|gb|EFD27552.1| ABC transporter related protein [Frankia symbiont of Datisca
           glomerata]
          Length = 560

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I  +  R+ EI  +M+   +   +  L  E AA+   I   + ++    +       +  
Sbjct: 96  IRAVLARYEEINEKMAAPDA--DFDSLLAEQAALIDRIEAANAWE-LDSQLDQAMDALRL 152

Query: 69  HNSDSE 74
              D++
Sbjct: 153 PPGDAD 158


>gi|242059479|ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
 gi|241930860|gb|EES04005.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 213 IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMK 271
           +  +  +E   + T +ASG GGQH N  +SAVR+ H+PTGI+     ++SQH+NR  A+ 
Sbjct: 90  MSDEELMEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRASALS 149

Query: 272 VLRARLYDVERK 283
            LR  +    R+
Sbjct: 150 RLRTLIALKVRR 161


>gi|317494361|ref|ZP_07952775.1| ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917611|gb|EFV38956.1| ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 642

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 15/81 (18%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ- 60
           +    +Q+  L  + A +E ++S+S   D   K     A ++  + + +      +E + 
Sbjct: 567 IMKMEQQMEKLSAQLATLEEKLSDSDLYDISRK-----AELTECLQQQNQTKAALEEAEM 621

Query: 61  ---------DLHTVIGDHNSD 72
                    +  T+  +  +D
Sbjct: 622 EWLDGQEKLEAMTLAFEAEND 642


>gi|317482109|ref|ZP_07941133.1| ABC transporter [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916468|gb|EFV37866.1| ABC transporter [Bifidobacterium sp. 12_1_47BFAA]
          Length = 559

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IAEKVARFNEIGEEMANPDA--DFDALMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 152

Query: 69  HNSDS 73
            + D+
Sbjct: 153 PDPDT 157


>gi|328780007|ref|XP_001120388.2| PREDICTED: major antigen [Apis mellifera]
          Length = 2026

 Score = 38.3 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 45/114 (39%), Gaps = 3/114 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQE-EQDLHT 64
            K++ +L+ + +E+E  + ++       +L +E   +  +I        K ++  ++   
Sbjct: 432 EKKLSELEKKRSELEKELEDNRG--ELERLQKENLDLKDVIEVERAEKDKLRDLLEESKK 489

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
           +  D+ +     +  + E   +  + + LE+    L    ++       LE R 
Sbjct: 490 LKEDNENLWAQLERLRGENDDLMGQKKALEDLNKQLNEDNESMKRTMGNLEARI 543


>gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 294

 Score = 38.3 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
                  ++  ED+    +R SG GGQ +N T++ V++ H PTG+ V     +S   NR 
Sbjct: 178 HLQRSIPELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQDTRSLSLNRK 237

Query: 268 RAMKVLRARL 277
            A + L  +L
Sbjct: 238 LARRWLLEKL 247


>gi|157164849|ref|YP_001466631.1| peptidase T (tripeptide aminopeptidase; aminotripeptidase;
           tripeptidase) [Campylobacter concisus 13826]
 gi|112800753|gb|EAT98097.1| ABC transporter ATP-binding protein uup [Campylobacter concisus
           13826]
          Length = 643

 Score = 38.3 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 6/60 (10%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDA------YIKLTEEYAAISPIISKISIYDQKKQEEQ 60
            +I  L+ R AE+   +S+            Y +L +  A +  + +      +  +E +
Sbjct: 584 DKISTLEARVAELNEGLSDPKIYQEVGLTKLYEELEKAKAELESLENDYFEVLEIAEELE 643


>gi|1050297|gb|AAA80458.1| product p150Glued [Neurospora crassa]
          Length = 1300

 Score = 38.3 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 5   SHKQICDLKNRFAEIELR-MSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDL 62
            +K+I DLK +   +E + M +   +++  K+  E      II  +   Y  ++QE QDL
Sbjct: 260 MNKEIEDLKAKLKVLEKKRMEDREKLNSLEKVKAERDKFERIIQTLQIKYQPQQQEIQDL 319

Query: 63  HTVIGDHNS 71
              + +  +
Sbjct: 320 KRQLKEAEN 328


>gi|18376073|emb|CAD21101.1| DYNACTIN (150 KDA DYNEIN-ASSOCIATED POLYPEPTIDE) ro-3 [Neurospora
           crassa]
          Length = 1300

 Score = 38.3 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 5   SHKQICDLKNRFAEIELR-MSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDL 62
            +K+I DLK +   +E + M +   +++  K+  E      II  +   Y  ++QE QDL
Sbjct: 260 MNKEIEDLKAKLKVLEKKRMEDREKLNSLEKVKAERDKFERIIQTLQIKYQPQQQEIQDL 319

Query: 63  HTVIGDHNS 71
              + +  +
Sbjct: 320 KRQLKEAEN 328


>gi|227546584|ref|ZP_03976633.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|322689823|ref|YP_004209557.1| ABC transporter ATP-binding protein [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691762|ref|YP_004221332.1| ABC transporter ATP-binding protein [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|227212901|gb|EEI80780.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|320456618|dbj|BAJ67240.1| ABC transporter ATP-binding component [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|320461159|dbj|BAJ71779.1| ABC transporter ATP-binding component [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 559

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IAEKVARFNEIGEEMANPDA--DFDALMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 152

Query: 69  HNSDS 73
            + D+
Sbjct: 153 PDPDT 157


>gi|204305830|ref|YP_002224647.1| gp203 [Mycobacterium phage Cali]
 gi|197312803|gb|ACH63156.1| gp203 [Mycobacterium phage Cali]
          Length = 110

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIM-VTSSEKSQHQNRLRAMKVLRA 275
           + L D  ++T R  G+GGQ+ NT D+AVRI H P+G +  +  E+SQ QN+  A + +  
Sbjct: 1   MTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 60

Query: 276 RLYDVERKRMANERSANRKLQI 297
                   +         K Q+
Sbjct: 61  SSKFQLWLKRQVANDDLIKAQV 82


>gi|46190488|ref|ZP_00121452.2| COG0488: ATPase components of ABC transporters with duplicated
           ATPase domains [Bifidobacterium longum DJO10A]
          Length = 552

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 89  IAEKVARFNEIGEEMANPDA--DFDALMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 145

Query: 69  HNSDS 73
            + D+
Sbjct: 146 PDPDT 150


>gi|295692258|ref|YP_003600868.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus ST1]
 gi|295030364|emb|CBL49843.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus ST1]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQD 61
            KQI  L+ R  EI+  M+      ++ KL      +S +  K+      +++  +E  +
Sbjct: 579 EKQIEQLEEREQEIQTEMANPEIASSFDKLGPLQEQLSDVQQKLDEANSAWEKAIEEMDN 638

Query: 62  LH 63
             
Sbjct: 639 FE 640


>gi|300310722|ref|YP_003774814.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1]
 gi|300073507|gb|ADJ62906.1| ABC-type transport system, with duplicated ATPase domains, protein
           [Herbaspirillum seropedicae SmR1]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 7   KQICDLKNRFAEIELRMSESPSV----DAYIKLTEEYAAI-SPIISKISIYDQKK 56
           K+I  L+    E+  ++++        D  +KL + +A I   ++  +  +++ +
Sbjct: 583 KRIAALEAEQKELSAKLADPDLYKKGADEAVKLNQRFAEIDEELLVSLERWEEIE 637


>gi|29028650|ref|NP_803339.1| SLT orf 37-like protein [Staphylococcus phage phi 12]
 gi|161509679|ref|YP_001575338.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|209363590|ref|YP_002268008.1| putative capsid protein [Staphylococcus phage phi2958PVL]
 gi|257432455|ref|ZP_05608818.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|258420297|ref|ZP_05683244.1| bacteriophage capsid protein [Staphylococcus aureus A9719]
 gi|258448836|ref|ZP_05696946.1| bacteriophage capsid protein [Staphylococcus aureus A6224]
 gi|282919222|ref|ZP_06326957.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           C427]
 gi|294848477|ref|ZP_06789223.1| phage major capsid protein [Staphylococcus aureus A9754]
 gi|295407558|ref|ZP_06817351.1| bacteriophage capsid protein [Staphylococcus aureus A8819]
 gi|297207830|ref|ZP_06924264.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297246588|ref|ZP_06930421.1| bacteriophage capsid protein [Staphylococcus aureus A8796]
 gi|297591012|ref|ZP_06949650.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300911916|ref|ZP_07129359.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|18920574|gb|AAL82314.1| SLT orf 37-like protein [Staphylococcus phage phi 12]
 gi|160368488|gb|ABX29459.1| possible bacteriophage capsid protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|208973091|dbj|BAG74407.1| putative capsid protein [Staphylococcus phage phi2958PVL]
 gi|257283334|gb|EEV13466.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257843722|gb|EEV68124.1| bacteriophage capsid protein [Staphylococcus aureus A9719]
 gi|257857873|gb|EEV80764.1| bacteriophage capsid protein [Staphylococcus aureus A6224]
 gi|282317032|gb|EFB47406.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           C427]
 gi|294824503|gb|EFG40926.1| phage major capsid protein [Staphylococcus aureus A9754]
 gi|294967577|gb|EFG43613.1| bacteriophage capsid protein [Staphylococcus aureus A8819]
 gi|296887546|gb|EFH26445.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297176546|gb|EFH35811.1| bacteriophage capsid protein [Staphylococcus aureus A8796]
 gi|297575898|gb|EFH94614.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300886162|gb|EFK81364.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302333118|gb|ADL23311.1| putative phage capsid protein [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|320140400|gb|EFW32255.1| phage capsid family protein [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142756|gb|EFW34559.1| phage capsid family protein [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 402

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 67/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K +++ 
Sbjct: 31  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDKG 90

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + D+    + +       +   +  +        L      +D     L  +  +
Sbjct: 91  EAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 150

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 151 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKAKGDTVKFTT 210

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 211 NKFKVFAAISDTVIHGSDVDLVNWVE 236


>gi|313124274|ref|YP_004034533.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312280837|gb|ADQ61556.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 630

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L+ +  EI+  M++      + KL      ++ +  KIS   Q  ++      
Sbjct: 570 EKDLEELEAKEQEIQEAMADPAIAADFSKLGPLQEELTAVQEKISQVSQAWEDASLALE 628


>gi|189440717|ref|YP_001955798.1| putative ABC transporter ATP-binding protein [Bifidobacterium
           longum DJO10A]
 gi|189429152|gb|ACD99300.1| ATPase component of ABC transporter [Bifidobacterium longum DJO10A]
          Length = 559

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IAEKVARFNEIGEEMANPDA--DFDALMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 152

Query: 69  HNSDS 73
            + D+
Sbjct: 153 PDPDT 157


>gi|66395599|ref|YP_239938.1| ORF011 [Staphylococcus phage 3A]
 gi|62635945|gb|AAX91056.1| ORF011 [Staphylococcus phage 3A]
          Length = 387

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K ++  
Sbjct: 16  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVKDIEEKEKAKVKDTG 75

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + DH    + +       +   +  +        L      +D     L  +  +
Sbjct: 76  EAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 135

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 136 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFTT 195

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 196 NKFKVFAAISDTVIHGSDVDLVNWVE 221


>gi|19553971|ref|NP_601973.1| ATPase with chaperone activity, ATP-binding subunit
           [Corynebacterium glutamicum ATCC 13032]
 gi|62391615|ref|YP_227017.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 13032]
 gi|1705922|sp|P53532|CLPB_CORGL RecName: Full=Chaperone protein ClpB
 gi|1163118|gb|AAB49540.1| heat-inducible expression; two ATP-binding domains; ClpB homolog,
           similar to E. coli ClpB protein, Swiss-Prot Accession
           Number P03815 [Corynebacterium glutamicum]
 gi|21325552|dbj|BAC00174.1| ATPases with chaperone activity, ATP-binding subunit
           [Corynebacterium glutamicum ATCC 13032]
 gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN)
           [Corynebacterium glutamicum ATCC 13032]
          Length = 852

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 10/135 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQDL 62
            ++  +  R    E+ +S+     +  +L +  + ++    K+S     +  +K    D+
Sbjct: 415 DELERIVRRLEIEEMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDV 474

Query: 63  HTVIGD------HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
             +  +       +  +E               I ELE +I       + +++     E+
Sbjct: 475 REMKEELEALRSESDIAERDGNYGRVAELRYGRIPELEKQIEDAESKVEVNENAMLTEEV 534

Query: 117 RAGTGGSEAALFVGD 131
              T     + + G 
Sbjct: 535 TPDTIADVVSAWTGI 549


>gi|293379973|ref|ZP_06626074.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
           214-1]
 gi|290923486|gb|EFE00388.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
           214-1]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQD 61
            KQI  L+ R  EI+  M+      ++ KL      +S +  K+      +++  +E  +
Sbjct: 579 EKQIEQLEEREQEIQTEMANPEIASSFDKLGPLQEQLSDVQQKLDEANSAWEKAIEEMDN 638

Query: 62  LH 63
             
Sbjct: 639 FE 640


>gi|283780196|ref|YP_003370951.1| ABC transporter [Pirellula staleyi DSM 6068]
 gi|283438649|gb|ADB17091.1| ABC transporter related protein [Pirellula staleyi DSM 6068]
          Length = 558

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 14  NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDS 73
           +R+ EI   ++E    D   KL +E A +   I     ++   +E +     +     D+
Sbjct: 103 DRYNEISTLLAEPMDDDQMQKLCDEMARLQDQIEATGAWE-MDRELEIAMDAMNLPEKDA 161

Query: 74  E 74
           +
Sbjct: 162 D 162


>gi|291516353|emb|CBK69969.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Bifidobacterium longum subsp. longum F8]
          Length = 559

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IAEKVARFNEIGEEMANPDA--DFDALMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 152

Query: 69  HNSDS 73
            + D+
Sbjct: 153 PDPDT 157


>gi|254283112|ref|ZP_04958080.1| ABC transporter, ATP-binding protein [gamma proteobacterium
           NOR51-B]
 gi|219679315|gb|EED35664.1| ABC transporter, ATP-binding protein [gamma proteobacterium
           NOR51-B]
          Length = 633

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTE-EYAAISPIISKISIYDQKKQEEQ 60
            +I  L+ + A++E + S+           +   A ++ +   +    ++  E  
Sbjct: 575 DKIEQLEAQQADLESKTSDPAFYQQPQDAVKATLAELNSVNELLDETLERWTELD 629


>gi|23466236|ref|NP_696839.1| putative ABC transporter ATP-binding protein [Bifidobacterium
           longum NCC2705]
 gi|23326982|gb|AAN25475.1| ATP binding protein of ABC transporter [Bifidobacterium longum
           NCC2705]
          Length = 559

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IAEKVARFNEIGEEMANPDA--DFDALMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 152

Query: 69  HNSDS 73
            + D+
Sbjct: 153 PDPDT 157


>gi|294673355|ref|YP_003573971.1| ABC transporter ATP-binding protein [Prevotella ruminicola 23]
 gi|294473067|gb|ADE82456.1| ABC transporter, ATP-binding protein [Prevotella ruminicola 23]
          Length = 662

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS-PIISKISIYDQKKQEEQDL 62
           +I  L+ R  E++  + +  +      +T EY  I   +  ++  +++  +E + L
Sbjct: 606 KIEQLEQRLKELDELLMQPENASDMTMVT-EYTGIKRDLDEEVERWEKASEELESL 660


>gi|297734943|emb|CBI17177.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+I+  ++E+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 384 DEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 443

Query: 70  NS 71
            +
Sbjct: 444 KN 445


>gi|256086973|ref|XP_002579656.1| myosin heavy chain [Schistosoma mansoni]
 gi|238665124|emb|CAZ35895.1| myosin heavy chain, putative [Schistosoma mansoni]
          Length = 1193

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           D++ R  E+E R+++    D    LTE    +S      +  ++ K++ +DL + +    
Sbjct: 891 DMEQRIKELEERLADEE--DQAANLTEVKKKMS------AEIEELKKDVEDLESSLQKAE 942

Query: 71  SDSEIRDLAQIEVLAIEKEIREL 93
            + + +D     + +   +  E+
Sbjct: 943 QEKQTKDNQIRTLQSEMAQQDEM 965


>gi|225436538|ref|XP_002277357.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 585

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+I+  ++E+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 383 DEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 442

Query: 70  NS 71
            +
Sbjct: 443 KN 444


>gi|327349384|gb|EGE78241.1| myosin class II heavy chain [Ajellomyces dermatitidis ATCC 18188]
          Length = 2585

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  ++            +E       I+ +      +    D
Sbjct: 2262 IMVLQDQLQQREGRIEELEQDLAAID--KDAPAKVKER---ETEINWLRELLGVR--LDD 2314

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            L  +I   +  S  +   +   + ++  ++  + E    +   + +  +  
Sbjct: 2315 LQDIINTLSQPSFNQQAVRDAAIRLKANLQMEQQEKERAMSGGNGNGSQQF 2365


>gi|261203535|ref|XP_002628981.1| myosin class II heavy chain [Ajellomyces dermatitidis SLH14081]
 gi|239586766|gb|EEQ69409.1| myosin class II heavy chain [Ajellomyces dermatitidis SLH14081]
          Length = 2520

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  ++            +E       I+ +      +    D
Sbjct: 2197 IMVLQDQLQQREGRIEELEQDLAAID--KDAPAKVKER---ETEINWLRELLGVR--LDD 2249

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            L  +I   +  S  +   +   + ++  ++  + E    +   + +  +  
Sbjct: 2250 LQDIINTLSQPSFNQQAVRDAAIRLKANLQMEQQEKERAMSGGNGNGSQQF 2300


>gi|282927350|ref|ZP_06334968.1| phage major capsid protein [Staphylococcus aureus A10102]
 gi|282590674|gb|EFB95750.1| phage major capsid protein [Staphylococcus aureus A10102]
          Length = 402

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 67/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K +++ 
Sbjct: 31  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDKG 90

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + D+    + +       +   +  +        L      +D     L  +  +
Sbjct: 91  EAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 150

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 151 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKAKGDTVKFTT 210

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 211 NKFKVFAAISDTVIHGSDVDLVNWVE 236


>gi|145296772|ref|YP_001139593.1| hypothetical protein cgR_2676 [Corynebacterium glutamicum R]
 gi|140846692|dbj|BAF55691.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 852

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 10/135 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQDL 62
            ++  +  R    E+ +S+     +  +L +  + ++    K+S     +  +K    D+
Sbjct: 415 DELERIVRRLEIEEMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDV 474

Query: 63  HTVIGD------HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
             +  +       +  +E               I ELE +I       + +++     E+
Sbjct: 475 REMKEELEALRSESDIAERDGNYGRVAELRYGRIPELEKQIEDAESKVEVNENAMLTEEV 534

Query: 117 RAGTGGSEAALFVGD 131
              T     + + G 
Sbjct: 535 TPDTIADVVSAWTGI 549


>gi|313679621|ref|YP_004057360.1| ABC transporter [Oceanithermus profundus DSM 14977]
 gi|313152336|gb|ADR36187.1| ABC transporter related protein [Oceanithermus profundus DSM 14977]
          Length = 622

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 9   ICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQ 60
           I DL  R   +  R ++     D Y  +  E A +   ++     +++  +E +
Sbjct: 567 IEDLHARLEALHARAAKPGLGPDDYAAIAREEAELKEALAAREAEWERAVEELE 620


>gi|239608200|gb|EEQ85187.1| myosin class II heavy chain [Ajellomyces dermatitidis ER-3]
          Length = 2544

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  ++            +E       I+ +      +    D
Sbjct: 2221 IMVLQDQLQQREGRIEELEQDLAAID--KDAPAKVKER---ETEINWLRELLGVR--LDD 2273

Query: 62   LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
            L  +I   +  S  +   +   + ++  ++  + E    +   + +  +  
Sbjct: 2274 LQDIINTLSQPSFNQQAVRDAAIRLKANLQMEQQEKERAMSGGNGNGSQQF 2324


>gi|256844539|ref|ZP_05550025.1| ABC transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256613617|gb|EEU18820.1| ABC transporter [Lactobacillus crispatus 125-2-CHN]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQD 61
            KQI  L+ R  EI+  M+      ++ KL      +S +  K+      +++  +E  +
Sbjct: 579 EKQIEQLEEREQEIQTEMANPEIASSFDKLGPLQEQLSDVQQKLDEANSAWEKAIEEMDN 638

Query: 62  LH 63
             
Sbjct: 639 FE 640


>gi|108756949|ref|YP_630627.1| ABC transporter ATP-binding protein [Myxococcus xanthus DK 1622]
 gi|108460829|gb|ABF86014.1| ABC transporter, ATP-binding protein [Myxococcus xanthus DK 1622]
          Length = 642

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
               I   ++R A +E ++++        K+ E    +   ++++     + QE QDL
Sbjct: 580 MEATIEAAESRKAGLEAQLADPAVYSNGPKVAEVQKELDAAVAEVDRLYTRWQELQDL 637


>gi|312977902|ref|ZP_07789648.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
           CTV-05]
 gi|310895209|gb|EFQ44277.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
           CTV-05]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQD 61
            KQI  L+ R  EI+  M+      ++ KL      +S +  K+      +++  +E  +
Sbjct: 579 EKQIEQLEEREQEIQTEMANPEIASSFDKLGPLQEQLSDVQQKLDEANSAWEKAIEEMDN 638

Query: 62  LH 63
             
Sbjct: 639 FE 640


>gi|262047554|ref|ZP_06020509.1| ABC transporter [Lactobacillus crispatus MV-3A-US]
 gi|260572130|gb|EEX28695.1| ABC transporter [Lactobacillus crispatus MV-3A-US]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQD 61
            KQI  L+ R  EI+  M+      ++ KL      +S +  K+      +++  +E  +
Sbjct: 579 EKQIEQLEEREQEIQTEMANPEIASSFDKLGPLQEQLSDVQQKLDEANSAWEKAIEEMDN 638

Query: 62  LH 63
             
Sbjct: 639 FE 640


>gi|242032147|ref|XP_002463468.1| hypothetical protein SORBIDRAFT_01g000380 [Sorghum bicolor]
 gi|241917322|gb|EER90466.1| hypothetical protein SORBIDRAFT_01g000380 [Sorghum bicolor]
          Length = 580

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            D++ R A+++  +S++ S     KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 383 DDIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVAVIKVGASTEAELEDRKLRIEDA 442

Query: 70  NS 71
            +
Sbjct: 443 KN 444


>gi|227877619|ref|ZP_03995672.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus crispatus JV-V01]
 gi|256849072|ref|ZP_05554505.1| ABC transporter [Lactobacillus crispatus MV-1A-US]
 gi|227862767|gb|EEJ70233.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus crispatus JV-V01]
 gi|256713848|gb|EEU28836.1| ABC transporter [Lactobacillus crispatus MV-1A-US]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQD 61
            KQI  L+ R  EI+  M+      ++ KL      +S +  K+      +++  +E  +
Sbjct: 579 EKQIEQLEEREQEIQTEMANPEIASSFDKLGPLQEQLSDVQQKLDEANSAWEKAIEEMDN 638

Query: 62  LH 63
             
Sbjct: 639 FE 640


>gi|297736949|emb|CBI26150.3| unnamed protein product [Vitis vinifera]
          Length = 1648

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 29/83 (34%), Gaps = 15/83 (18%)

Query: 3   FLSHKQ----ICDLKNRFAEIELRMSESPSVDA------YIKLTEEYAAISPI---ISKI 49
           ++   +    I  L  R  E++ ++ E              +L ++ A +  +     ++
Sbjct: 380 WVPQDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEV 439

Query: 50  SIYDQKKQEEQD--LHTVIGDHN 70
               ++KQ  +D     +    N
Sbjct: 440 ERLKKEKQTLEDNTAKKLSEMEN 462


>gi|125717917|ref|YP_001035050.1| antibiotic ABC transporter ATPase [Streptococcus sanguinis SK36]
 gi|125497834|gb|ABN44500.1| ABC-type transporter (antibiotic resistance protein), ATPase
           component, putative [Streptococcus sanguinis SK36]
          Length = 622

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 6/52 (11%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
              I  L+ R +EIE  M E+     + +L+E    +      ++ K   Y+
Sbjct: 566 EDDIEALEERISEIEAAMQENG--SDFARLSELQQELDKQNEKLLEKYERYE 615


>gi|323439019|gb|EGA96752.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus O11]
          Length = 402

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K ++  
Sbjct: 31  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVKDIEEKEKAKVKDTG 90

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + DH    + +       +   +  +        L      +D     L  +  +
Sbjct: 91  EAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 150

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 151 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKAKGDTVKFAT 210

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 211 NKFKVFAAISDTVIHGSDVDLVNWVE 236


>gi|269123085|ref|YP_003305662.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314411|gb|ACZ00785.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2075

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 1    MVFLSHKQICDLKNRFAEIELRM-SESPSVDAYI-KLTEEYAAISPIISKISIYDQKKQE 58
            ++  S  ++  +  +  E   ++ +++  ++     L++E   +   IS I      + +
Sbjct: 1905 IIDNSLDELDGINKKLEEQNNKLIAQNNKLNEKRGDLSKELKELKDKISVIEKIKMNEDD 1964

Query: 59   E 59
             
Sbjct: 1965 L 1965


>gi|261344411|ref|ZP_05972055.1| ABC transporter, ATP-binding protein [Providencia rustigianii DSM
           4541]
 gi|282567314|gb|EFB72849.1| ABC transporter, ATP-binding protein [Providencia rustigianii DSM
           4541]
          Length = 644

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 6   HKQICDLKNR-------FAEIELRMSESPSVDAYIKLTEEYAA-ISPIISKISIYDQKKQ 57
            K+I +L+ +         E+E ++S+    +   K   E    +     + S  +  + 
Sbjct: 568 RKKITELEKKMEKYSTSLNELEAKLSDPAIYEQDKKA--ELTDCLKKQTEQKSALEDVEM 625

Query: 58  EEQDLHTVIGDHNSDSE 74
           E  DL   +    S+ E
Sbjct: 626 EWMDLQEQLETMTSEFE 642


>gi|253700800|ref|YP_003021989.1| class I peptide chain release factor [Geobacter sp. M21]
 gi|251775650|gb|ACT18231.1| Class I peptide chain release factor [Geobacter sp. M21]
          Length = 105

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I   DI+++  RASG GGQH NTTDSAVRI H+PTG++   S  +SQ +NR +AM+ L
Sbjct: 1   MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAMERL 60

Query: 274 RARLYDVERK 283
              L   E+K
Sbjct: 61  AELLRRREQK 70


>gi|153001634|ref|YP_001367315.1| valyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151366252|gb|ABS09252.1| valyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 958

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEEQDLH 63
            KQ+  L+   A IE ++S    V       + +E A ++ +   +   +++K E   L 
Sbjct: 898 DKQLEKLRQEIARIEGKLSNQGFVAKAPAEVIDKERAKMTDLKRDMDKLNEQKSEFAKLE 957

Query: 64  T 64
            
Sbjct: 958 A 958


>gi|42520334|ref|NP_966249.1| AAA family ATPase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410072|gb|AAS14183.1| ATPase, AAA family [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 404

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 8   QICDLKNR----FAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           QI +L  R    + EIE  ++ +   +   KL  E   +   I+ ++  ++  +   ++ 
Sbjct: 102 QIKELNKRLSSQYNEIEKLIASAAKKEELNKLNNEVKELKVKIASVATKEEINKLSNEVE 161

Query: 64  TVIGDHNSDSEIRD 77
            +IG   +  E+ +
Sbjct: 162 KLIGSAATKDEMEE 175


>gi|322706718|gb|EFY98298.1| nuclear segregation protein (Bfr1), putative [Metarhizium
           anisopliae ARSEF 23]
          Length = 478

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 34/117 (29%), Gaps = 1/117 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPII-SKISIYDQKKQEEQDLH 63
           S KQI DL+ +  EI+  M +        +  +  A +  I   +   Y        +  
Sbjct: 176 SQKQIDDLRAKIKEIKDSMEDPEQKALSEQYNKIQAELDTIKAEQDEAYKGISSLRDERS 235

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            +  +           + E    +K  +  E E       +   + +    E     
Sbjct: 236 KLQAEQQEKYTAIRKLKDEYYGQKKAFQAFEREAREKAKARREAEKEQWKKETLKKE 292


>gi|322385625|ref|ZP_08059269.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus cristatus ATCC 51100]
 gi|321270363|gb|EFX53279.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus cristatus ATCC 51100]
          Length = 621

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 7/57 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYDQKKQEEQ 60
            I +L+ R A IE+ M ++     + KL++    +      ++ K   Y+    E +
Sbjct: 568 DIEELEARIAAIEIEMEQNG--SDFTKLSKLQKELDDKNEQLLEKYERYE-YLSELE 621


>gi|317047591|ref|YP_004115239.1| ABC transporter-like protein [Pantoea sp. At-9b]
 gi|316949208|gb|ADU68683.1| ABC transporter related protein [Pantoea sp. At-9b]
          Length = 637

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 6/59 (10%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +++  L++R  E++ +MS            +    +  +       +   +  ++L  +
Sbjct: 577 QKLEQLESRIGELQAQMSHPDFFSQPHD--KTQPVLDALAQTEQELETAFERWEELEAL 633


>gi|169826475|ref|YP_001696633.1| putative ATP-dependent helicase [Lysinibacillus sphaericus C3-41]
 gi|168990963|gb|ACA38503.1| Putative ATP-dependent helicase [Lysinibacillus sphaericus C3-41]
          Length = 1268

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 43/114 (37%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            KQ+  ++    ++E  +++ PS++      +E +     +   + Y +  +++Q L   
Sbjct: 502 EKQLAQIEPIIQQLEQTLADHPSIEDLQLTIQETSQKVEQLEAATQYKELLEQKQQLAVQ 561

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             D     EI +   I +   +K +  L +        +      S +L  +  
Sbjct: 562 FQDIQEKYEIENNRLIIMKEAQKYVHTLTSYERIQRYLQHYQIRPSHVLSQQIN 615


>gi|160876370|ref|YP_001555686.1| valyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160861892|gb|ABX50426.1| valyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315268560|gb|ADT95413.1| valyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 958

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEEQDLH 63
            KQ+  L+   A IE ++S    V       + +E A ++ +   +   +++K E   L 
Sbjct: 898 DKQLEKLRQEIARIEGKLSNQGFVAKAPADVIDKERAKMTDLKRDMDKLNEQKSEFAKLE 957

Query: 64  T 64
            
Sbjct: 958 A 958


>gi|288957754|ref|YP_003448095.1| ABC transporter ATP-binding protein [Azospirillum sp. B510]
 gi|288910062|dbj|BAI71551.1| ABC transporter ATP-binding protein [Azospirillum sp. B510]
          Length = 558

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYD 53
             L +RF E+   M++  +   +  L  E   +   I     +D
Sbjct: 100 KALLDRFNEVSNLMADPDA--DFDALLAEQGELQEKIDAADAWD 141


>gi|222528290|ref|YP_002572172.1| chromosome segregation ATPase-like protein [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222455137|gb|ACM59399.1| Chromosome segregation ATPase-like protein [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 1350

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 47/130 (36%), Gaps = 6/130 (4%)

Query: 2   VFLSHKQICDLKNRFAEI----ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           +F   K++ ++K    E+      ++S+     A  KL +E   +  +  ++  Y +K +
Sbjct: 333 IFKLQKELLNIKEELKEVDEQKNKKLSQIN--SASQKLEKERQQLIALEEELEKYKRKIK 390

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++ +        +   + +          +   ++L   +    +   + EI+
Sbjct: 391 DSVEEGKLLIESIGFQRFLETLDMYLFGQGSLDILKDEISSFLYQVEIVLKNYEKLAEIK 450

Query: 118 AGTGGSEAAL 127
               G    L
Sbjct: 451 KDLDGFYKNL 460


>gi|306796119|ref|ZP_07434421.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu006]
 gi|308343443|gb|EFP32294.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu006]
          Length = 848

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 29/71 (40%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +   ++  L  R    E+ +S+     +  +L +  + ++    K++    + Q E++  
Sbjct: 411 VEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAI 470

Query: 64  TVIGDHNSDSE 74
            ++ D     E
Sbjct: 471 EIVRDLKEQLE 481


>gi|308370390|ref|ZP_07421333.2| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu003]
 gi|308375144|ref|ZP_07442858.2| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu007]
 gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis]
 gi|308332178|gb|EFP21029.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu003]
 gi|308347335|gb|EFP36186.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu007]
 gi|323721237|gb|EGB30297.1| endopeptidase subunit ATP binding protein B ClpB [Mycobacterium
           tuberculosis CDC1551A]
          Length = 877

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 29/71 (40%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +   ++  L  R    E+ +S+     +  +L +  + ++    K++    + Q E++  
Sbjct: 440 VEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAI 499

Query: 64  TVIGDHNSDSE 74
            ++ D     E
Sbjct: 500 EIVRDLKEQLE 510


>gi|15607525|ref|NP_214898.1| endopeptidase ATP binding protein [Mycobacterium tuberculosis
           H37Rv]
 gi|15839768|ref|NP_334805.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Mycobacterium
           tuberculosis CDC1551]
 gi|31791561|ref|NP_854054.1| endopeptidase ATP-binding protein ClpB [Mycobacterium bovis
           AF2122/97]
 gi|121636297|ref|YP_976520.1| putative endopeptidase ATP binding protein (chain b) clpB
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148660150|ref|YP_001281673.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Mycobacterium
           tuberculosis H37Ra]
 gi|148821580|ref|YP_001286334.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
           tuberculosis F11]
 gi|215402134|ref|ZP_03414315.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
           tuberculosis 02_1987]
 gi|215409893|ref|ZP_03418701.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215425601|ref|ZP_03423520.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
           tuberculosis T92]
 gi|215429204|ref|ZP_03427123.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
           tuberculosis EAS054]
 gi|215444469|ref|ZP_03431221.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
           tuberculosis T85]
 gi|218752011|ref|ZP_03530807.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
           tuberculosis GM 1503]
 gi|224988769|ref|YP_002643456.1| putative endopeptidase ATP binding protein chain b [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253797307|ref|YP_003030308.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis KZN 1435]
 gi|254549327|ref|ZP_05139774.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|260185251|ref|ZP_05762725.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis CPHL_A]
 gi|260199381|ref|ZP_05766872.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis T46]
 gi|260203533|ref|ZP_05771024.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis K85]
 gi|289441763|ref|ZP_06431507.1| ATP-dependent chaperone ClpB [Mycobacterium tuberculosis T46]
 gi|289445922|ref|ZP_06435666.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis CPHL_A]
 gi|289552633|ref|ZP_06441843.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis KZN 605]
 gi|289572969|ref|ZP_06453196.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis K85]
 gi|289744081|ref|ZP_06503459.1| ATP-dependent chaperone clpB [Mycobacterium tuberculosis 02_1987]
 gi|289748868|ref|ZP_06508246.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis T92]
 gi|289752413|ref|ZP_06511791.1| clpB [Mycobacterium tuberculosis EAS054]
 gi|289756452|ref|ZP_06515830.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289760496|ref|ZP_06519874.1| endopeptidase ATP binding protein (chain B) clpB [Mycobacterium
           tuberculosis GM 1503]
 gi|297632866|ref|ZP_06950646.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis KZN 4207]
 gi|297729841|ref|ZP_06958959.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis KZN R506]
 gi|298523859|ref|ZP_07011268.1| clpB [Mycobacterium tuberculosis 94_M4241A]
 gi|306774478|ref|ZP_07412815.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu001]
 gi|306779225|ref|ZP_07417562.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu002]
 gi|306787381|ref|ZP_07425703.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu004]
 gi|306791932|ref|ZP_07430234.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu005]
 gi|306801978|ref|ZP_07438646.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu008]
 gi|306966386|ref|ZP_07479047.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu009]
 gi|306970582|ref|ZP_07483243.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu010]
 gi|307078309|ref|ZP_07487479.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu011]
 gi|307082868|ref|ZP_07491981.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu012]
 gi|313657170|ref|ZP_07814050.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis KZN V2475]
 gi|54036851|sp|P63287|CLPB_MYCBO RecName: Full=Chaperone protein ClpB
 gi|54036852|sp|P63288|CLPB_MYCTU RecName: Full=Chaperone protein ClpB
 gi|2909505|emb|CAA17390.1| PROBABLE ENDOPEPTIDASE ATP BINDING PROTEIN (CHAIN B) CLPB (CLPB
           PROTEIN) (HEAT SHOCK PROTEIN F84.1) [Mycobacterium
           tuberculosis H37Rv]
 gi|13879896|gb|AAK44619.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Mycobacterium
           tuberculosis CDC1551]
 gi|31617147|emb|CAD93254.1| PROBABLE ENDOPEPTIDASE ATP BINDING PROTEIN (CHAIN B) CLPB (CLPB
           PROTEIN) (HEAT SHOCK PROTEIN F84.1) [Mycobacterium bovis
           AF2122/97]
 gi|121491944|emb|CAL70407.1| Probable endopeptidase ATP binding protein (chain b) clpB
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148504302|gb|ABQ72111.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Mycobacterium
           tuberculosis H37Ra]
 gi|148720107|gb|ABR04732.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
           tuberculosis F11]
 gi|224771882|dbj|BAH24688.1| putative endopeptidase ATP binding protein chain b [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253318810|gb|ACT23413.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis KZN 1435]
 gi|289414682|gb|EFD11922.1| ATP-dependent chaperone ClpB [Mycobacterium tuberculosis T46]
 gi|289418880|gb|EFD16081.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis CPHL_A]
 gi|289437265|gb|EFD19758.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis KZN 605]
 gi|289537400|gb|EFD41978.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis K85]
 gi|289684609|gb|EFD52097.1| ATP-dependent chaperone clpB [Mycobacterium tuberculosis 02_1987]
 gi|289689455|gb|EFD56884.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis T92]
 gi|289693000|gb|EFD60429.1| clpB [Mycobacterium tuberculosis EAS054]
 gi|289708002|gb|EFD72018.1| endopeptidase ATP binding protein (chain B) clpB [Mycobacterium
           tuberculosis GM 1503]
 gi|289712016|gb|EFD76028.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298493653|gb|EFI28947.1| clpB [Mycobacterium tuberculosis 94_M4241A]
 gi|308216983|gb|EFO76382.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu001]
 gi|308327825|gb|EFP16676.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu002]
 gi|308335937|gb|EFP24788.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu004]
 gi|308339589|gb|EFP28440.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu005]
 gi|308351279|gb|EFP40130.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu008]
 gi|308355932|gb|EFP44783.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu009]
 gi|308359889|gb|EFP48740.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu010]
 gi|308363790|gb|EFP52641.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu011]
 gi|308367411|gb|EFP56262.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis SUMu012]
 gi|326902210|gb|EGE49143.1| endopeptidase subunit ATP binding protein B ClpB [Mycobacterium
           tuberculosis W-148]
 gi|328457094|gb|AEB02517.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis KZN 4207]
          Length = 848

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 29/71 (40%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +   ++  L  R    E+ +S+     +  +L +  + ++    K++    + Q E++  
Sbjct: 411 VEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAI 470

Query: 64  TVIGDHNSDSE 74
            ++ D     E
Sbjct: 471 EIVRDLKEQLE 481


>gi|332308518|ref|YP_004436369.1| ABC transporter related protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175847|gb|AEE25101.1| ABC transporter related protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 645

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 32/75 (42%), Gaps = 9/75 (12%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ----D 61
            K++ DL+ +   IE +M++    DA  K     A +  +++  +     ++E +    D
Sbjct: 573 EKKMADLEAKLELIEQQMADPDIYDADKK-----AELKALLADQASCKIAQEEAEMLWLD 627

Query: 62  LHTVIGDHNSDSEIR 76
               I    ++ + +
Sbjct: 628 AQEQIEAKQAEFDAQ 642


>gi|146343293|ref|YP_001208341.1| class I peptide chain release factor domain-containing protein
           [Bradyrhizobium sp. ORS278]
 gi|146196099|emb|CAL80126.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. ORS278]
          Length = 207

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 177 KFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQH 236
           ++  G                      + V          +   D+R ++ RA G GGQH
Sbjct: 67  RWTRGSLLWVCRSPLRPHHGRKNWFVGI-VDLPLPAQLPMLSTSDVRFESFRAGGPGGQH 125

Query: 237 VNTTDSAVRITHIPTG-IMVTSSEKSQHQNR 266
            N T+SAVR  H+P+G   +    +SQH N+
Sbjct: 126 QNKTESAVRAVHLPSGLTAIARDGRSQHGNK 156


>gi|197118419|ref|YP_002138846.1| hydrolase [Geobacter bemidjiensis Bem]
 gi|197087779|gb|ACH39050.1| hydrolase, putative [Geobacter bemidjiensis Bem]
          Length = 105

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 215 VDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVL 273
           ++I   DI+++  RASG GGQH NTTDSAVRI H+PTG++   S  +SQ +NR +AM+ L
Sbjct: 1   MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAMERL 60

Query: 274 RARLYDVERK 283
              L   E+K
Sbjct: 61  AELLRRREQK 70


>gi|325685688|gb|EGD27767.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 455

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L+ +  EI+  M++      + KL      ++ +  KIS   Q  ++      
Sbjct: 395 EKDLEELEAKEQEIQEAMADPAIAADFSKLGPLQEELTAVQEKISQVSQAWEDASLALE 453


>gi|291223821|ref|XP_002731906.1| PREDICTED: early endosome antigen 1-like [Saccoglossus kowalevskii]
          Length = 1606

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 98/292 (33%), Gaps = 11/292 (3%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
             KQI +++++ AE E R++E       I   ++ +  + +  K S  + K   +++    
Sbjct: 922  EKQIKEIQSKLAETESRLNE-----EQINHQKKTSEFTELCEKFSELETKYTAKEE-KIA 975

Query: 66   IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            + +  ++    DL        +K+I   E +     +  +  +    + E +      E+
Sbjct: 976  LVEERNNKLSEDLKNAHNTLQQKDIHFDELQQEVQKVTAEYSEKLKGMQEEQLKL-SEES 1034

Query: 126  ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
              +  ++   Y +  + +   V+ L+ +        +       + ++   K        
Sbjct: 1035 VKYKKEVEEEYNKLKSEKTLVVDSLNETKTIL--EDKNKEFAEMKNIYEDEKQYMKAEAS 1092

Query: 186  QRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
            ++V   E   ++      +A              E I+++T  +   G       +   +
Sbjct: 1093 RKVE--ERQKQLSELNTVLASTQRHLNEAKSTLEEKIQVETELSERVGQLQTEKHELQEQ 1150

Query: 246  ITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQI 297
            +      I     + S+    L         L      +   ++   +K++I
Sbjct: 1151 LHLSNERIKAFQHQMSEQDENLAKQINQCEELQQQMEHKEEVQKDMQKKIEI 1202


>gi|237808180|ref|YP_002892620.1| ABC transporter-like protein [Tolumonas auensis DSM 9187]
 gi|237500441|gb|ACQ93034.1| ABC transporter related [Tolumonas auensis DSM 9187]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/62 (11%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           Q+  L+ +   I+ ++++       ++ T+E   +  +       +Q     ++L  +  
Sbjct: 581 QLEQLEAKIDSIQSQINQPDFFSLPVERTKEI--LDALQQAELNLEQAFARWEELEAMKN 638

Query: 68  DH 69
           + 
Sbjct: 639 EE 640


>gi|328861876|gb|EGG10978.1| hypothetical protein MELLADRAFT_102812 [Melampsora larici-populina
           98AG31]
          Length = 734

 Score = 37.5 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/88 (9%), Positives = 29/88 (32%), Gaps = 13/88 (14%)

Query: 7   KQICDLKNRFAEI--ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
           K+  +L +R  ++  E++ +       +    +E   +  +              ++L  
Sbjct: 641 KKFPNLLDRLKDLSPEIQTARENQWKEFDAAAKEKTRLEKL-----------ARLEELKD 689

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRE 92
           +  + ++     +L +       K  + 
Sbjct: 690 MSKEKDNLFGCIELIRTATSWFCKRYKN 717


>gi|157363011|ref|YP_001469778.1| peptidoglycan-binding LysM [Thermotoga lettingae TMO]
 gi|157313615|gb|ABV32714.1| Peptidoglycan-binding LysM [Thermotoga lettingae TMO]
          Length = 573

 Score = 37.5 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 28/73 (38%), Gaps = 10/73 (13%)

Query: 5  SHKQICDLKNRFAEIELRMSES-----PSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
              +  +  R  E+E R+++       +     KL +E + I+  +S       +++  
Sbjct: 21 DQDLLEQINRRLDELEYRIAQIEKSTYNNQKNIEKLQQEVSKINNEVSSAKKLLDEQKNL 80

Query: 60 -----QDLHTVIG 67
                +++ ++ 
Sbjct: 81 PAVSPDEINEIMA 93


>gi|156552740|ref|XP_001599627.1| PREDICTED: similar to vesicle docking protein P115 [Nasonia
           vitripennis]
          Length = 832

 Score = 37.5 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 4   LSHKQICDLKNRFAEIELRMSES-PSVDAYIKL---TEEYAAISP-IISKISIYDQKKQE 58
            S++++   KN+ +++E R+SES   +         ++    +   +  +   ++  K++
Sbjct: 725 SSNEELEKYKNQISDLEKRLSESLTLIQELQSKTVDSKTTTDLENRLKQQTKEFENLKKD 784

Query: 59  EQDLHTVIGDHNS 71
           + DL  ++ D ++
Sbjct: 785 QDDLLVLLTDQDN 797


>gi|289706251|ref|ZP_06502613.1| ABC transporter, ATP-binding protein YjiK [Micrococcus luteus SK58]
 gi|289556974|gb|EFD50303.1| ABC transporter, ATP-binding protein YjiK [Micrococcus luteus SK58]
          Length = 560

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 3/62 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
              R+ +I   M+   +   +  L EE   +   I     +D    + +     +     
Sbjct: 99  KIQRYNQISEEMANPDA--DFDALMEEMGELQSAIDAADAWD-IDSQLEQAMDALRTPPG 155

Query: 72  DS 73
           D 
Sbjct: 156 DE 157


>gi|289568297|ref|ZP_06448524.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis T17]
 gi|289542050|gb|EFD45699.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
           tuberculosis T17]
          Length = 716

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 29/71 (40%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +   ++  L  R    E+ +S+     +  +L +  + ++    K++    + Q E++  
Sbjct: 411 VEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAI 470

Query: 64  TVIGDHNSDSE 74
            ++ D     E
Sbjct: 471 EIVRDLKEQLE 481


>gi|123446657|ref|XP_001312077.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121893911|gb|EAX99147.1| hypothetical protein TVAG_115510 [Trichomonas vaginalis G3]
          Length = 283

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 38/104 (36%), Gaps = 2/104 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD--LHT 64
           ++I  L+    EI+ + S++       +L +     + +  K++  +    +  +  L  
Sbjct: 25  EKIQKLQTELNEIQKQKSDNEIQSLQSQLNQINEESNKLKEKLNEMESNTNQIDETILSK 84

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDD 108
           +     SD        ++ L+ +   + +       L  K ++ 
Sbjct: 85  IKELKESDDFKSIYNFLDELSSQGNRKMISKSCEEGLWKKISNK 128


>gi|18978215|ref|NP_579572.1| chromosome segregation protein smc [Pyrococcus furiosus DSM 3638]
 gi|18894028|gb|AAL81967.1| chromosome segregation protein smc [Pyrococcus furiosus DSM 3638]
          Length = 1291

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 53/120 (44%), Gaps = 5/120 (4%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            +    +++  +++R   +E R++E        K + E   I  +++KI+       E + 
Sbjct: 908  ISSLKEELSRIESRIESLESRLNEELL---PRKASLE-EEIEGLVNKINALKNNISENEK 963

Query: 62   LHTVI-GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
               ++  +      I +  + E+  + ++ ++LE +I+ L   K+    K   LEI A T
Sbjct: 964  ALELLNKELEKLKSIEENIKGEIRTLREKRKKLEEDISKLREKKEVLQRKLQELEIEANT 1023


>gi|256086975|ref|XP_002579657.1| myosin heavy chain [Schistosoma mansoni]
 gi|238665125|emb|CAZ35896.1| myosin heavy chain [Schistosoma mansoni]
          Length = 1095

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           D++ R  E+E R+++    D    LTE    +S      +  ++ K++ +DL + +    
Sbjct: 793 DMEQRIKELEERLADEE--DQAANLTEVKKKMS------AEIEELKKDVEDLESSLQKAE 844

Query: 71  SDSEIRDLAQIEVLAIEKEIREL 93
            + + +D     + +   +  E+
Sbjct: 845 QEKQTKDNQIRTLQSEMAQQDEM 867


>gi|269203616|ref|YP_003282885.1| phage major capsid protein [Staphylococcus aureus subsp. aureus
           ED98]
 gi|262075906|gb|ACY11879.1| phage major capsid protein [Staphylococcus aureus subsp. aureus
           ED98]
          Length = 387

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K ++  
Sbjct: 16  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDTG 75

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + D+    + +       +   +  +        L      +D     L  +  +
Sbjct: 76  EAYQSLNDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 135

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 136 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFAT 195

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 196 NKFKVFAAISDTVIHGSDVELVNWVE 221


>gi|260906220|ref|ZP_05914542.1| putative ABC transporter ATP-binding protein [Brevibacterium linens
           BL2]
          Length = 560

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 3/66 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF  I   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 96  IKAKLDRFNAISEEMASPDA--DFDALMEEMGKLQEAIDAADAWD-LDSQLEQAMDALRC 152

Query: 69  HNSDSE 74
              D E
Sbjct: 153 PPPDVE 158


>gi|115488160|ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group]
 gi|77554291|gb|ABA97087.1| RuBisCO subunit binding-protein alpha subunit, chloroplast
           precursor, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649074|dbj|BAF29586.1| Os12g0277500 [Oryza sativa Japonica Group]
 gi|125536273|gb|EAY82761.1| hypothetical protein OsI_37967 [Oryza sativa Indica Group]
 gi|313575777|gb|ADR66968.1| 60 kDa chaperonin alpha subunit [Oryza sativa Japonica Group]
          Length = 578

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  +SE+ S+    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 375 DEIQARVAQLKKELSETDSIYDTEKLAERIAKLSGGVAVIKVGAATETELEDRQLRIEDA 434

Query: 70  NS 71
            +
Sbjct: 435 KN 436


>gi|322816204|gb|EFZ24595.1| hypothetical protein TCSYLVIO_9259 [Trypanosoma cruzi]
          Length = 678

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/184 (9%), Positives = 43/184 (23%), Gaps = 1/184 (0%)

Query: 114 LEIRAGTGGSEAALF-VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            ++     G+   ++    L    +             +  D D             + +
Sbjct: 411 CDMNTRNDGATGRVWSAHGLLTALDFTRNDDALPWMQQNFGDIDVASIMRWARFYHSKDL 470

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGS 232
            ++ +       V  +        +   A    +               +   T  A   
Sbjct: 471 MAKDRPRYLARAVAWIELLSKRSHMMEEAPLTYMRKSKPLSLNTNSNLRVAWQTPVARPD 530

Query: 233 GGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           G   +   +      H      VT + +   +        ++    +V  K    E  A 
Sbjct: 531 GPPRLLAREEGYTFHHNEHSRFVTETYRHPGETLQSRFLAMQPIHTEVSAKEDFQEMYAQ 590

Query: 293 RKLQ 296
           ++ Q
Sbjct: 591 QQEQ 594


>gi|104774426|ref|YP_619406.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|103423507|emb|CAI98409.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
          Length = 638

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L+ +  EI+  M++      + KL      ++ +  KIS   Q  ++      
Sbjct: 578 EKDLEELEAKEQEIQEAMADPAIAADFSKLGPLQEDLTAVQEKISQVSQAWEDASLALE 636


>gi|292654853|ref|YP_003534750.1| chromosome segregation protein SMC [Haloferax volcanii DS2]
 gi|291370379|gb|ADE02606.1| chromosome segregation protein SMC [Haloferax volcanii DS2]
          Length = 1240

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 6   HKQICDLKNRFAEI--ELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +QI DL++   E+  E    +S      ++L+E  A I  + ++      +  E ++  
Sbjct: 359 QEQIDDLEDDIREVKVEKASVKSDIQSKRVELSEVQAEIDSVDTEFDELKSELAERKETL 418

Query: 64  TVIGDHNSD 72
             + D  +D
Sbjct: 419 DELKDEKND 427


>gi|296110035|ref|YP_003616984.1| hypothetical protein Metin_1370 [Methanocaldococcus infernus ME]
 gi|295434849|gb|ADG14020.1| conserved hypothetical protein [Methanocaldococcus infernus ME]
          Length = 435

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           +I D+ +R   I   + ES   D    + +    +S I  +++I +       ++  ++
Sbjct: 228 KINDIASRLENIGEMLEESVDWDN---VGKIRGELSEIDREMAIIETTLGYLDEVIEIL 283


>gi|212696620|ref|ZP_03304748.1| hypothetical protein ANHYDRO_01160 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676351|gb|EEB35958.1| hypothetical protein ANHYDRO_01160 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 566

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 1/108 (0%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           K +  L+    ++E++MSE  + D   ++ +EYA  S    K   Y   K E + +   +
Sbjct: 92  KDLISLEKNIRDLEVKMSEEKNPDRLDEIMKEYAKKSEEFEKKQGY-SYKSEIRGVLIGM 150

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
           G    D +              E+  L  E   L+L  +  +      
Sbjct: 151 GFEEEDFQKEVSLLSGGQKARVELACLLLEKPDLILLDEPTNHLDIKA 198


>gi|77164768|ref|YP_343293.1| ABC transporter, ATPase subunit [Nitrosococcus oceani ATCC 19707]
 gi|254434697|ref|ZP_05048205.1| ABC transporter, ATP-binding protein [Nitrosococcus oceani AFC27]
 gi|76883082|gb|ABA57763.1| ABC transporter, ATPase subunit [Nitrosococcus oceani ATCC 19707]
 gi|207091030|gb|EDZ68301.1| ABC transporter, ATP-binding protein [Nitrosococcus oceani AFC27]
          Length = 598

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K+I   +      + R+ +   +    +LT  YA +    +K+    Q+ +E + L  
Sbjct: 540 EKKILKAEKSLETFQERLHDPEIMSDSERLTTLYAQLQESKNKVDRLYQRWEELELLRQ 598


>gi|157126537|ref|XP_001660917.1| chromosome-associated kinesin KIF4A (chromokinesin) [Aedes aegypti]
 gi|108873223|gb|EAT37448.1| chromosome-associated kinesin KIF4A (chromokinesin) [Aedes aegypti]
          Length = 1173

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 16/115 (13%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH-- 63
             +I +L+ +  E+  +++ +  VD   KL EE               Q + E  +L   
Sbjct: 562 EDKIKELEKQIEELNDQLNTTKVVDKKSKLAEERR---------KKVQQLEAELAELRKK 612

Query: 64  -----TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
                 ++     D++       E+ A++    +L   +                
Sbjct: 613 SIQQAKMLQLKEKDTQRVQNLSREIQAMKATRVKLVKSMRAESENFRQWKINREK 667


>gi|325963661|ref|YP_004241567.1| ATPase component of ABC transporters with duplicated ATPase domain
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469748|gb|ADX73433.1| ATPase component of ABC transporters with duplicated ATPase domain
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 560

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
              RF EI   M+   +   Y  L EE   +   I     +D    + +     +    +
Sbjct: 99  KIQRFNEISEEMASPDA--DYDTLLEEMGQLQEAIDAADAWD-LDSQLEQAMDALRCPPA 155

Query: 72  DSE 74
           D++
Sbjct: 156 DAD 158


>gi|300811164|ref|ZP_07091676.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300497868|gb|EFK32878.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 638

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L+ +  EI+  M++      + KL      ++ +  KIS   Q  ++      
Sbjct: 578 EKDLEELEAKEQEIQEAMADPAIAADFSKLGPLQEDLTAVQEKISQVSQAWEDASLALE 636


>gi|71410844|ref|XP_807697.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70871754|gb|EAN85846.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 650

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/184 (9%), Positives = 43/184 (23%), Gaps = 1/184 (0%)

Query: 114 LEIRAGTGGSEAALF-VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGV 172
            ++     G+   ++    L    +             +  D D             + +
Sbjct: 411 CDMNTRNDGATGRVWSAHGLLTALDFKQNDDALPWMQQNFGDIDVASVMRWARFYHSKDL 470

Query: 173 FSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGS 232
            ++ +       V  +        +   A    +               +   T  A   
Sbjct: 471 MAKDRPRYLARAVAWIELLSKRSHMMEEAPLTYMRKSKPLSLNTNSNLRVAWQTPVARPD 530

Query: 233 GGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292
           G   +   +      H      VT + +   +        ++    +V  K    E  A 
Sbjct: 531 GPPRLLAREEGYTFHHNEHSRFVTETYRHPGETLQSRFLAMQPIHTEVSAKEDFQEMYAQ 590

Query: 293 RKLQ 296
           ++ Q
Sbjct: 591 QQEQ 594


>gi|317127421|ref|YP_004093703.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
 gi|315472369|gb|ADU28972.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
          Length = 1287

 Score = 37.5 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDLHT 64
             ++I +L    AE++ R+++         L    + I  ++ ++   +++ ++    L  
Sbjct: 1135 QQRINELMELIAELQARIADLEGSSEIADLENRLSEIEGLLEELKSNFNELEEYVSHLEA 1194

Query: 65   VIGDHNSD 72
            +I D   +
Sbjct: 1195 LIKDLKDE 1202


>gi|262052893|ref|ZP_06025076.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus 930918-3]
 gi|259159200|gb|EEW44261.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus 930918-3]
 gi|283469603|emb|CAQ48814.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus ST398]
 gi|283470728|emb|CAQ49939.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 387

 Score = 37.5 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K ++  
Sbjct: 16  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDTG 75

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + DH    + +       +   +  +        L      +D     L  +  +
Sbjct: 76  EAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 135

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 136 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFTT 195

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 196 NKFKVFAAISDTVIHGSDVDLVNWVE 221


>gi|11498637|ref|NP_069865.1| chromosome segregation protein [Archaeoglobus fulgidus DSM 4304]
 gi|18201999|sp|O29230|RAD50_ARCFU RecName: Full=DNA double-strand break repair rad50 ATPase
 gi|2649562|gb|AAB90211.1| purine NTPase, putative [Archaeoglobus fulgidus DSM 4304]
          Length = 886

 Score = 37.5 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 12  LKNRFAEIELRMSES-PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           L+ +  E+E ++ E    ++   K  +E   + P   + SI ++   E       +    
Sbjct: 251 LEEKLRELEKQLKEVVERIEDLEKKAKEVKELKPKAERYSILEKLLSEINQALRDVEKRE 310

Query: 71  SD 72
            D
Sbjct: 311 GD 312


>gi|192362423|ref|YP_001984000.1| ABC transporter ATP-binding protein [Cellvibrio japonicus Ueda107]
 gi|190688588|gb|ACE86266.1| ABC transporter, ATP-binding protein [Cellvibrio japonicus Ueda107]
          Length = 630

 Score = 37.5 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           Q+  L+ R  +IE  + ++   D   K T     +  ++++ S    + QE ++   +I 
Sbjct: 568 QLEKLQKRLGDIESLLGDTSIYDDKNKAT-----LQELLAEQSQLTAQLQETEENWLLIS 622

Query: 68  DH 69
           + 
Sbjct: 623 EE 624


>gi|116514525|ref|YP_813431.1| ABC transporter ATPase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093840|gb|ABJ58993.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 630

 Score = 37.5 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            K + +L+ +  EI+  M++      + KL      ++ +  KIS   Q  ++      
Sbjct: 570 EKDLEELEAKEQEIQEAMADPAIAADFSKLGPLQEDLTAVQEKISQVSQAWEDASLALE 628


>gi|239917488|ref|YP_002957046.1| ATPase component of ABC transporters with duplicated ATPase domain
           [Micrococcus luteus NCTC 2665]
 gi|281414021|ref|ZP_06245763.1| putative ABC transporter ATP-binding protein [Micrococcus luteus
           NCTC 2665]
 gi|239838695|gb|ACS30492.1| ATPase component of ABC transporters with duplicated ATPase domain
           [Micrococcus luteus NCTC 2665]
          Length = 560

 Score = 37.5 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 3/62 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
              R+ +I   M+   +   +  L EE   +   I     +D    + +     +     
Sbjct: 99  KIQRYNQISEEMANPDA--DFDALMEEMGELQSAIDAADAWD-IDSQLEQAMDALRTPPG 155

Query: 72  DS 73
           D 
Sbjct: 156 DE 157


>gi|198427187|ref|XP_002127446.1| PREDICTED: hypothetical protein [Ciona intestinalis]
          Length = 212

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 7/35 (20%)

Query: 300 GDRSER---IRTYNFSQGRITDHRINLTLYKLEYV 331
           GDRS R   IRTY +   R    RI++ ++  + +
Sbjct: 139 GDRSSRASGIRTYVYDPAR----RISIEVHDEDTI 169


>gi|315081138|gb|EFT53114.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL078PA1]
          Length = 561

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF E+   M+   +   +  L  E   +   +   + +D      +     + 
Sbjct: 95  DIKAKLARFEEVSAEMANPDA--DFDALMAEMGELQTELDNANAWD-IDTRLEQAMDALQ 151

Query: 68  DHNSDS 73
               D+
Sbjct: 152 CPPGDT 157


>gi|255072429|ref|XP_002499889.1| predicted protein [Micromonas sp. RCC299]
 gi|226515151|gb|ACO61147.1| predicted protein [Micromonas sp. RCC299]
          Length = 588

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++  R A+++  ++ES S+    KL+E  A ++  ++ I +    + E +D    I D 
Sbjct: 376 EEIDIRVAQLKKELAESDSIYDTQKLSERIAKLAGGVAVIKVGAATETELEDRKLRIEDA 435

Query: 70  NS 71
            +
Sbjct: 436 KN 437


>gi|156938172|ref|YP_001435968.1| SMC domain-containing protein [Ignicoccus hospitalis KIN4/I]
 gi|156567156|gb|ABU82561.1| SMC domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 878

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 9/134 (6%)

Query: 9   ICDLKNRFAEIELRMSES-PSVDAYIKLTEEYAA--------ISPIISKISIYDQKKQEE 59
           + DLK RF E++ ++S +  SV+ Y KL +E           +  +  K  +  Q + + 
Sbjct: 516 LADLKKRFNELKEQLSRTRASVEHYDKLVKEVKEELSAVTAQLEELKRKEGMLRQIEHQL 575

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           ++L  V      + E R     + L +     ELE  I  L        + S   E++  
Sbjct: 576 EELRGVDASKEEEVEKRLSEIKKELEVLGSPEELERRIAELERLASKKKELSAAAELKRR 635

Query: 120 TGGSEAALFVGDLF 133
                        F
Sbjct: 636 EEAELKRELASLGF 649


>gi|154287970|ref|XP_001544780.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150408421|gb|EDN03962.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 2152

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 9/67 (13%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYI-KLTEEYAAISPIISKISIYDQKKQEEQ 60
            + +   Q+   + R  E+E  ++    +D Y     +E       I+ +      +    
Sbjct: 1932 IMVLQDQLQQREGRIEELEQELAA---IDKYAPAKVKER---ETEINWLRELLGVR--LD 1983

Query: 61   DLHTVIG 67
            DL  +I 
Sbjct: 1984 DLQDIIN 1990


>gi|327334130|gb|EGE75844.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL097PA1]
          Length = 561

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF E+   M+   +   +  L  E   +   +   + +D      +     + 
Sbjct: 95  DIKAKLARFEEVSAEMANPDA--DFDALMAEMGELQTELDNANAWD-IDTRLEQAMDALQ 151

Query: 68  DHNSDS 73
               D+
Sbjct: 152 CPPGDT 157


>gi|314963782|gb|EFT07882.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL082PA1]
          Length = 561

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF E+   M+   +   +  L  E   +   +   + +D      +     + 
Sbjct: 95  DIKAKLARFEEVSAEMANPDA--DFDALMAEMGELQTELDNANAWD-IDTRLEQAMDALQ 151

Query: 68  DHNSDS 73
               D+
Sbjct: 152 CPPGDT 157


>gi|313773626|gb|EFS39592.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL074PA1]
          Length = 561

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF E+   M+   +   +  L  E   +   +   + +D      +     + 
Sbjct: 95  DIKAKLARFEEVSAEMANPDA--DFDALMAEMGELQTELDNANAWD-IDTRLEQAMDALQ 151

Query: 68  DHNSDS 73
               D+
Sbjct: 152 CPPGDT 157


>gi|163784961|ref|ZP_02179710.1| hypothetical protein HG1285_11183 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879771|gb|EDP73526.1| hypothetical protein HG1285_11183 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 436

 Score = 37.5 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 16/37 (43%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS 43
           +++ DL  +  E++ ++  +       KL +    + 
Sbjct: 218 EKMLDLIKKINEVQNKLQSTKDPKEKQKLQKIMKDLE 254


>gi|270307641|ref|YP_003329699.1| ABC transporter, ATP-binding protein [Dehalococcoides sp. VS]
 gi|270153533|gb|ACZ61371.1| ABC transporter, ATP-binding protein [Dehalococcoides sp. VS]
          Length = 663

 Score = 37.5 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKL---TEEYAA-ISPIISKISIYDQKKQEEQDLHT 64
           I +L+ R  E+E  +++     +  K    + EY      +++    + +  Q+   L  
Sbjct: 593 ITNLEQRKQELETLLADPDLYRSGQKAADTSAEYKNCKEQLVTLGDKWLKLCQQNDALKQ 652

Query: 65  VIGD 68
            + D
Sbjct: 653 KLED 656


>gi|14590941|ref|NP_143015.1| ATP-dependent helicase LHR [Pyrococcus horikoshii OT3]
 gi|3257526|dbj|BAA30209.1| 1352aa long hypothetical ATP-dependent helicase LHR [Pyrococcus
           horikoshii OT3]
          Length = 1352

 Score = 37.5 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 9/65 (13%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI------YDQKKQEEQDL 62
           I +L+ R  EIE ++    + +   ++    + +  II            +   +E   L
Sbjct: 721 IPNLEKRLKEIEEKLGYPGTYNR-REI--RRSELKAIIKLYEKVARERGLNDVLKELSYL 777

Query: 63  HTVIG 67
             +  
Sbjct: 778 KELSE 782


>gi|313127260|ref|YP_004037530.1| condensin subunit smc [Halogeometricum borinquense DSM 11551]
 gi|312293625|gb|ADQ68085.1| condensin subunit Smc [Halogeometricum borinquense DSM 11551]
          Length = 1198

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I D+++   E+E  +++S   +   +  E  A I     ++   D +  E Q       
Sbjct: 794 DIDDVQSEIDELESELADSKIPELTAQADEIRAEIEEKEDRMDELDGRLNELQLEKEYAE 853

Query: 68  DHNSD 72
           D   D
Sbjct: 854 DAIED 858


>gi|297810689|ref|XP_002873228.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319065|gb|EFH49487.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 506

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/75 (12%), Positives = 25/75 (33%), Gaps = 8/75 (10%)

Query: 5   SHKQICDLKNRFAEIELRMSE--------SPSVDAYIKLTEEYAAISPIISKISIYDQKK 56
            H+ +   + R  EI+  +SE           +D   K  +   A+    +  +   +  
Sbjct: 90  DHETVDKARARLREIDASLSESFEEIALSPNDIDVAEKEQKRREAVDQEKTWYNSILKLN 149

Query: 57  QEEQDLHTVIGDHNS 71
           +  +    ++ +   
Sbjct: 150 ELHESYEKLLKEAEE 164


>gi|116670964|ref|YP_831897.1| putative ABC transporter ATP-binding protein [Arthrobacter sp.
           FB24]
 gi|116611073|gb|ABK03797.1| ABC transporter related protein [Arthrobacter sp. FB24]
          Length = 560

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
              RF EI   M+   +   Y  L EE   +   I     +D    + +     +    +
Sbjct: 99  KIQRFNEISEEMANPDA--DYDTLLEEMGQLQEAIDAADAWD-LDSQLEQAMDALRCPPA 155

Query: 72  DSE 74
           D++
Sbjct: 156 DAD 158


>gi|314923745|gb|EFS87576.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL001PA1]
 gi|314966132|gb|EFT10231.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL082PA2]
 gi|315095023|gb|EFT66999.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL060PA1]
 gi|315104360|gb|EFT76336.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL050PA2]
 gi|327328199|gb|EGE69968.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL103PA1]
          Length = 561

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF E+   M+   +   +  L  E   +   +   + +D      +     + 
Sbjct: 95  DIKAKLARFEEVSAEMANPDA--DFDALMAEMGELQTELDNANAWD-IDTRLEQAMDALQ 151

Query: 68  DHNSDS 73
               D+
Sbjct: 152 CPPGDT 157


>gi|325202191|gb|ADY97645.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           M01-240149]
          Length = 636

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|315100417|gb|EFT72393.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL046PA1]
          Length = 561

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF E+   M+   +   +  L  E   +   +   + +D      +     + 
Sbjct: 95  DIKAKLARFEEVSAEMANPDA--DFDALMAEMGELQTELDNANAWD-IDTRLEQAMDALQ 151

Query: 68  DHNSDS 73
               D+
Sbjct: 152 CPPGDT 157


>gi|313763473|gb|EFS34837.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL013PA1]
 gi|313816654|gb|EFS54368.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL059PA1]
 gi|313829518|gb|EFS67232.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL063PA2]
 gi|314914835|gb|EFS78666.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL005PA4]
 gi|314919413|gb|EFS83244.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL050PA1]
 gi|314920680|gb|EFS84511.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL050PA3]
 gi|314930560|gb|EFS94391.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL067PA1]
 gi|314954486|gb|EFS98892.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL027PA1]
 gi|314957581|gb|EFT01684.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL002PA1]
 gi|314968392|gb|EFT12490.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL037PA1]
 gi|315099099|gb|EFT71075.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL059PA2]
 gi|315109123|gb|EFT81099.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL030PA2]
 gi|327454852|gb|EGF01507.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL087PA3]
 gi|327457863|gb|EGF04518.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL083PA2]
 gi|328755317|gb|EGF68933.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL087PA1]
 gi|328758202|gb|EGF71818.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL025PA2]
          Length = 561

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF E+   M+   +   +  L  E   +   +   + +D      +     + 
Sbjct: 95  DIKAKLARFEEVSAEMANPDA--DFDALMAEMGELQTELDNANAWD-IDTRLEQAMDALQ 151

Query: 68  DHNSDS 73
               D+
Sbjct: 152 CPPGDT 157


>gi|309803048|ref|ZP_07697149.1| ABC transporter, ATP-binding protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|308220515|gb|EFO76826.1| ABC transporter, ATP-binding protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 766

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +++  L+ R AE+E +M+E      Y  L +    +  +  +    + +  E  +   
Sbjct: 709 ERKLAKLEERKAELESQMAEHD-PSDYEGLGKINGQLQAVADESESLEMEWMELSEQLE 766


>gi|50843104|ref|YP_056331.1| putative ABC transporter ATP-binding protein [Propionibacterium
           acnes KPA171202]
 gi|289426494|ref|ZP_06428237.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           SK187]
 gi|289428728|ref|ZP_06430411.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           J165]
 gi|295131156|ref|YP_003581819.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           SK137]
 gi|50840706|gb|AAT83373.1| ABC transporter ATP-binding protein [Propionibacterium acnes
           KPA171202]
 gi|289153222|gb|EFD01940.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           SK187]
 gi|289158126|gb|EFD06346.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           J165]
 gi|291375521|gb|ADD99375.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           SK137]
 gi|313793863|gb|EFS41887.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL110PA1]
 gi|313801255|gb|EFS42506.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL110PA2]
 gi|313808066|gb|EFS46547.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL087PA2]
 gi|313811462|gb|EFS49176.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL083PA1]
 gi|313813513|gb|EFS51227.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL025PA1]
 gi|313819636|gb|EFS57350.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL046PA2]
 gi|313822040|gb|EFS59754.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL036PA1]
 gi|313823724|gb|EFS61438.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL036PA2]
 gi|313826046|gb|EFS63760.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL063PA1]
 gi|313831202|gb|EFS68916.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL007PA1]
 gi|313834225|gb|EFS71939.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL056PA1]
 gi|313840023|gb|EFS77737.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL086PA1]
 gi|314924783|gb|EFS88614.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL036PA3]
 gi|314961976|gb|EFT06077.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL002PA2]
 gi|314974079|gb|EFT18175.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL053PA1]
 gi|314976632|gb|EFT20727.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL045PA1]
 gi|314978918|gb|EFT23012.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL072PA2]
 gi|314984295|gb|EFT28387.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL005PA1]
 gi|314986641|gb|EFT30733.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL005PA2]
 gi|314990997|gb|EFT35088.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL005PA3]
 gi|315079631|gb|EFT51624.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL053PA2]
 gi|315083656|gb|EFT55632.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL027PA2]
 gi|315087025|gb|EFT59001.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL002PA3]
 gi|315089200|gb|EFT61176.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL072PA1]
 gi|315095423|gb|EFT67399.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL038PA1]
 gi|315106890|gb|EFT78866.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL030PA1]
 gi|327328518|gb|EGE70280.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL096PA2]
 gi|327329617|gb|EGE71373.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL096PA3]
 gi|327444305|gb|EGE90959.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL043PA2]
 gi|327444813|gb|EGE91467.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL043PA1]
 gi|327446301|gb|EGE92955.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL013PA2]
 gi|327452111|gb|EGE98765.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL092PA1]
 gi|328752446|gb|EGF66062.1| ATP-binding cassette protein, ChvD family [Propionibacterium acnes
           HL020PA1]
 gi|328759953|gb|EGF73537.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL099PA1]
 gi|332676032|gb|AEE72848.1| ABC transporter ATP-binding protein [Propionibacterium acnes 266]
          Length = 561

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF E+   M+   +   +  L  E   +   +   + +D      +     + 
Sbjct: 95  DIKAKLARFEEVSAEMANPDA--DFDALMAEMGELQTELDNANAWD-IDTRLEQAMDALQ 151

Query: 68  DHNSDS 73
               D+
Sbjct: 152 CPPGDT 157


>gi|82752841|gb|ABB89816.1| cortactin-binding protein 2 [Monodelphis domestica]
          Length = 1637

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 46/136 (33%), Gaps = 13/136 (9%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI-------------KLTEEYAAISPIISKIS 50
           +   Q+  L+    ++  R+ +    + ++             K+ EE   +  +++ + 
Sbjct: 113 MEKLQLQTLEQEHKKLSARLEDERGKNKHVVLMLVKECKQLSGKIIEEAQKLEEVMASLE 172

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
              +K  E ++  T     +++ E +   Q+     E+E    +            ++  
Sbjct: 173 EEKKKTNELEEALTAEKQRSAEMEAQMEKQLSEFDTEREQLRAKLNREEAHTTDLKEEID 232

Query: 111 SCILEIRAGTGGSEAA 126
                I     G+++ 
Sbjct: 233 KMKKMIEQLKKGNDSK 248


>gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi]
          Length = 225

 Score = 37.5 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 210 AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSE-KSQHQNRLR 268
                  +  +D+    +R SG GGQ V  T++ V +TH PTG++V     +S  +NR  
Sbjct: 107 DNSRVPVLQEDDLEESFVRGSGPGGQSVAKTNNKVVLTHKPTGLVVQCHTSRSLFENRRI 166

Query: 269 AMKVLRARLYDVERKRMANERSANRKLQ 296
           A ++L  +L  +     + E    R  Q
Sbjct: 167 ARQLLVTKLDQLINGEQSVEAQRQRLDQ 194


>gi|258427136|ref|ZP_05688058.1| bacteriophage capsid protein [Staphylococcus aureus A9299]
 gi|257849914|gb|EEV73873.1| bacteriophage capsid protein [Staphylococcus aureus A9299]
          Length = 402

 Score = 37.5 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K ++  
Sbjct: 31  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDTG 90

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + DH    + +       +   +  +        L      +D     L  +  +
Sbjct: 91  EAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 150

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 151 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFTT 210

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 211 NKFKVFAAISDTVIHGSDVDLVNWVE 236


>gi|227488629|ref|ZP_03918945.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227091523|gb|EEI26835.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 491

 Score = 37.5 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA-ISPIISK 48
            ++ DL  R   +  R++    VD Y++L ++Y+  ++ + S+
Sbjct: 376 DRLDDLHERLTALTARIASPSFVDEYVELLDDYSHTLAKVKSE 418


>gi|126340599|ref|XP_001364665.1| PREDICTED: similar to cortactin-binding protein 2 [Monodelphis
           domestica]
          Length = 1663

 Score = 37.5 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 46/136 (33%), Gaps = 13/136 (9%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI-------------KLTEEYAAISPIISKIS 50
           +   Q+  L+    ++  R+ +    + ++             K+ EE   +  +++ + 
Sbjct: 140 MEKLQLQTLEQEHKKLSARLEDERGKNKHVVLMLVKECKQLSGKIIEEAQKLEEVMASLE 199

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
              +K  E ++  T     +++ E +   Q+     E+E    +            ++  
Sbjct: 200 EEKKKTNELEEALTAEKQRSAEMEAQMEKQLSEFDTEREQLRAKLNREEAHTTDLKEEID 259

Query: 111 SCILEIRAGTGGSEAA 126
                I     G+++ 
Sbjct: 260 KMKKMIEQLKKGNDSK 275


>gi|125974303|ref|YP_001038213.1| ABC transporter related protein [Clostridium thermocellum ATCC
           27405]
 gi|256003479|ref|ZP_05428469.1| ABC transporter related protein [Clostridium thermocellum DSM 2360]
 gi|281418357|ref|ZP_06249377.1| ABC transporter related protein [Clostridium thermocellum JW20]
 gi|125714528|gb|ABN53020.1| ABC transporter related protein [Clostridium thermocellum ATCC
           27405]
 gi|255992503|gb|EEU02595.1| ABC transporter related protein [Clostridium thermocellum DSM 2360]
 gi|281409759|gb|EFB40017.1| ABC transporter related protein [Clostridium thermocellum JW20]
 gi|316941451|gb|ADU75485.1| ABC transporter related protein [Clostridium thermocellum DSM 1313]
          Length = 638

 Score = 37.5 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           + K+I D + R  EIE +M+    V  ++KL E +  ++ +  K+    +     
Sbjct: 578 TEKEITDTEARIKEIENQMTNEEVVSDHVKLVELHNELNELNLKLEQLYELWDNL 632


>gi|159109360|ref|XP_001704945.1| Spindle pole protein, putative [Giardia lamblia ATCC 50803]
 gi|157433021|gb|EDO77271.1| Spindle pole protein, putative [Giardia lamblia ATCC 50803]
          Length = 693

 Score = 37.5 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 42/121 (34%), Gaps = 2/121 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            + +     R   +E R+ +     A   + +E A +  ++  ++      QEE D    
Sbjct: 328 ERDLEQKVARIHALETRIQDMN--QAATSMIKERADLDTLVQSLNATITSLQEELDSLIA 385

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
            G    +  + +++ I     +      + +     L     + +  + E R   G +E+
Sbjct: 386 AGKKQEEKHLVEMSDIRGAMQKAVEDVNKQDQENAQLNDRIHELEEALNEARRRAGAAES 445

Query: 126 A 126
            
Sbjct: 446 E 446


>gi|78499691|gb|ABB45845.1| hypothetical protein [Eutrema halophilum]
          Length = 1061

 Score = 37.5 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 47/146 (32%), Gaps = 13/146 (8%)

Query: 2   VFLSHKQICDLKNRFAEIELRM---SESPSVDAYIKLTEEYAAIS------PIISKISIY 52
           V      +  L+   A++E  +   S+         L  E   +        ++      
Sbjct: 350 VMSDKALVKHLQRELAKLESELRSPSQPLIASDSTALLTE-KDLEVEKLKKEVVQLAQQL 408

Query: 53  DQKKQEEQDLHTVIGDH---NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
           +Q + E +DL  ++G+      ++   +  ++ +     ++R      +    P      
Sbjct: 409 EQARSEIEDLRRMVGEEKQREKETLSTESVEVLLEHQYPKLRVRSAWDSENTTPLSPISA 468

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRM 135
               L  R+     E  +F    FR+
Sbjct: 469 HRSSLSPRSTEYSYEENVFQLSDFRI 494


>gi|332025000|gb|EGI65187.1| General vesicular transport factor p115 [Acromyrmex echinatior]
          Length = 1386

 Score = 37.1 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 5/64 (7%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHTVIG 67
           + DL+NR AE    M +    D   K  +E + +   +  KI   ++ K++++ L  ++ 
Sbjct: 744 VADLENRLAEYTHIMQQHNEKD---KENKE-SDLESQLKLKIDELEKLKKDQEALLELLT 799

Query: 68  DHNS 71
           D +S
Sbjct: 800 DQDS 803


>gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB]
 gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB]
          Length = 136

 Score = 37.1 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 1/79 (1%)

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRA 275
           I  +D+R   +R+SG GGQ+VN T + V + H+PTG+ V    ++SQ  NRL A ++L  
Sbjct: 20  ISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPTGLSVKCQQDRSQTVNRLLARRLLLD 79

Query: 276 RLYDVERKRMANERSANRK 294
           R+  ++  R+A E++   K
Sbjct: 80  RIERLKTGRIAAEKARIEK 98


>gi|313680233|ref|YP_004057972.1| valyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152948|gb|ADR36799.1| valyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 866

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKK 56
            K+  +L+ R A +E +++     +      +  E   +    S++       
Sbjct: 811 QKKASELERRIAGLEKKLANPGFTERAPAEVVERERRNLEEAKSQLERIRAVL 863


>gi|254673185|emb|CBA08074.1| ABC transporter, ATP-binding protein [Neisseria meningitidis
           alpha275]
          Length = 636

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|52841585|ref|YP_095384.1| SidG [Legionella pneumophila subsp. pneumophila str. Philadelphia
           1]
 gi|52628696|gb|AAU27437.1| SidG [Legionella pneumophila subsp. pneumophila str. Philadelphia
           1]
          Length = 974

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIY-DQKKQEEQDL 62
           LS K I +L +   E++  ++          L         +I K     +Q K +E+ L
Sbjct: 386 LSPKSIENLIDHIDELKNELASKQEKKNERNLN--------LIKKYEELCEQYKDDEEGL 437

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
              + +   D E  + A+ ++     EI++L +    L   K++    S  LE
Sbjct: 438 EEALWEEGIDVEEVNSAKKDISKPAPEIQKLTDLQEQLRNHKESGVKLSSELE 490


>gi|325136398|gb|EGC59006.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           M0579]
          Length = 636

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|325128161|gb|EGC51052.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           N1568]
          Length = 636

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|309380006|emb|CBX21417.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 636

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K          I    + K+  +++ +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQNRAEEIETLLLEKLERWERLE 628


>gi|317127994|ref|YP_004094276.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
 gi|315472942|gb|ADU29545.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
          Length = 1665

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHT 64
             ++I +L+   A+++ R+SE       ++L    A +   +++  + Y   +    +L  
Sbjct: 1518 QEKIHELEEIIADLQDRISELEDSSDIVELELRVAELEGQLVALQAQYSDLEDFVAELEQ 1577

Query: 65   VIGDHNSDSE 74
             I D  S+ E
Sbjct: 1578 RISDLRSELE 1587


>gi|154509212|ref|ZP_02044854.1| hypothetical protein ACTODO_01733 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798846|gb|EDN81266.1| hypothetical protein ACTODO_01733 [Actinomyces odontolyticus ATCC
           17982]
          Length = 560

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I +   RF EI   M+   +   +  L EE   +   I   + +D    +       + 
Sbjct: 95  DIFEKLARFNEISEEMANPDA--DFDALMEEMGKLQTEIDAANAWD-IDSQLDQAMDALR 151

Query: 68  DHNSDS 73
               D 
Sbjct: 152 CPPPDQ 157


>gi|291616938|ref|YP_003519680.1| Uup [Pantoea ananatis LMG 20103]
 gi|291151968|gb|ADD76552.1| Uup [Pantoea ananatis LMG 20103]
          Length = 639

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 6/59 (10%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +++  L+ R  E++ +MS            +    +  +       +      ++L ++
Sbjct: 579 QKLEQLEARIGELQAKMSHPDFFSQPHD--KTQPVLDELADVEQQLETAFARWEELESM 635


>gi|313884055|ref|ZP_07817821.1| putative lipoprotein [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620502|gb|EFR31925.1| putative lipoprotein [Eremococcus coleocola ACS-139-V-Col8]
          Length = 310

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 3   FLSHK-QICDLKNRFAEIELRMSESPS-VDAYIKLTEEYAAISPIISKISIYDQKKQE 58
            +S + Q+ +L NR  E+E  + +    ++    L  E  ++   I  +        E
Sbjct: 142 MISQEEQLEELNNRLKEVEEDLKDEDITLEQKQALRAEKNSLEDQIKALENQQDSTNE 199


>gi|282921758|ref|ZP_06329475.1| phage major capsid protein [Staphylococcus aureus A9765]
 gi|282594020|gb|EFB99009.1| phage major capsid protein [Staphylococcus aureus A9765]
          Length = 402

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K ++  
Sbjct: 31  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDTG 90

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + DH    + +       +   +  +        L      +D     L  +  +
Sbjct: 91  EAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 150

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 151 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFTT 210

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 211 NKFKVFAAISDTVIHGSDVDLVNWVE 236


>gi|254230741|ref|ZP_04924068.1| endopeptidase ATP binding protein (chain B) clpB [Mycobacterium
           tuberculosis C]
 gi|124599800|gb|EAY58810.1| endopeptidase ATP binding protein (chain B) clpB [Mycobacterium
           tuberculosis C]
          Length = 594

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 29/71 (40%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +   ++  L  R    E+ +S+     +  +L +  + ++    K++    + Q E++  
Sbjct: 290 VEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAI 349

Query: 64  TVIGDHNSDSE 74
            ++ D     E
Sbjct: 350 EIVRDLKEQLE 360


>gi|171741393|ref|ZP_02917200.1| hypothetical protein BIFDEN_00476 [Bifidobacterium dentium ATCC
           27678]
 gi|283455257|ref|YP_003359821.1| ABC transporter ATP-binding protein [Bifidobacterium dentium Bd1]
 gi|171277007|gb|EDT44668.1| hypothetical protein BIFDEN_00476 [Bifidobacterium dentium ATCC
           27678]
 gi|283101891|gb|ADB08997.1| ATP-binding protein of ABC transporter system [Bifidobacterium
           dentium Bd1]
          Length = 740

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +++  L+ R AE+E +M+E      Y  L +    +  +  +    + +  E  +   
Sbjct: 683 ERKLAKLEERKAELESQMAEHD-PSDYEGLGKINGQLQAVADESESLEMEWMELSEQLE 740


>gi|325208055|gb|ADZ03507.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           NZ-05/33]
          Length = 636

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|261392625|emb|CAX50189.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis 8013]
 gi|325204096|gb|ADY99549.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           M01-240355]
          Length = 636

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|253699344|ref|YP_003020533.1| ABC transporter [Geobacter sp. M21]
 gi|251774194|gb|ACT16775.1| ABC transporter related protein [Geobacter sp. M21]
          Length = 648

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 4/54 (7%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK---LTEEYAAI-SPIISKISIYDQK 55
            ++I   +   AE+E  M++      +       E +A +   I S    ++  
Sbjct: 595 EQKIATKEGELAELEQAMAKPDFFSDHEAARIAGERHAQLTEEIASLYQAWEAA 648


>gi|224476075|ref|YP_002633681.1| ClpB chaperone [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222420682|emb|CAL27496.1| ClpB chaperone [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 869

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 5/119 (4%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           + R  E++  +S     +   K +   + +     KIS   +K+ E  +    + D  ++
Sbjct: 437 QQRLKELQEELS-----NEKEKQSALQSRVEQEKEKISKLQEKRAELDESRKALEDAENN 491

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
            ++   A+++   I K  +EL +  +     +  D+D+     +     G   + + G 
Sbjct: 492 YDLEKAAELQHGKIPKLEKELRDLEDAFQDEQSEDNDRIIREIVTDEEIGDIVSQWTGI 550


>gi|125546535|gb|EAY92674.1| hypothetical protein OsI_14427 [Oryza sativa Indica Group]
          Length = 584

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  +S++ S     KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 380 DEIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 439

Query: 70  NS 71
            +
Sbjct: 440 KN 441


>gi|31193919|gb|AAP44754.1| putative rubisco subunit binding-protein alpha subunit precursor
           (60 kDa chaperonin alpha subunit) [Oryza sativa Japonica
           Group]
 gi|108712216|gb|ABG00011.1| RuBisCO subunit binding-protein alpha subunit, chloroplast
           precursor, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125588715|gb|EAZ29379.1| hypothetical protein OsJ_13451 [Oryza sativa Japonica Group]
 gi|313575771|gb|ADR66965.1| 60 kDa chaperonin alpha subunit [Oryza sativa Japonica Group]
          Length = 584

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  +S++ S     KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 380 DEIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 439

Query: 70  NS 71
            +
Sbjct: 440 KN 441


>gi|116200067|ref|XP_001225845.1| hypothetical protein CHGG_08189 [Chaetomium globosum CBS 148.51]
 gi|88179468|gb|EAQ86936.1| hypothetical protein CHGG_08189 [Chaetomium globosum CBS 148.51]
          Length = 1351

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 3/112 (2%)

Query: 7   KQICDLKNRFAEIELR-MSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDLHT 64
           K+I DLK +   +E + + +   ++   K+  E      II  +   Y  ++QE  +L  
Sbjct: 329 KEIEDLKAKLRVLEKKRIEDREKLNDLDKMKSERDRFERIIQTLQIKYQPQQQEIAELKR 388

Query: 65  VIGDHNSD-SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
            + +  S    + D+ Q    A+E    + E       + K   D      E
Sbjct: 389 QLKEAESRLYNVEDIQQEHETAMELATLDREMAEEMADVYKTELDALKHKTE 440


>gi|40792788|gb|AAR90361.1| SidG [Legionella pneumophila]
          Length = 965

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIY-DQKKQEEQDL 62
           LS K I +L +   E++  ++          L         +I K     +Q K +E+ L
Sbjct: 377 LSPKSIENLIDHIDELKNELASKQEKKNERNLN--------LIKKYEELCEQYKDDEEGL 428

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
              + +   D E  + A+ ++     EI++L +    L   K++    S  LE
Sbjct: 429 EEALWEEGIDVEEVNSAKKDISKPAPEIQKLTDLQEQLRNHKESGVKLSSELE 481


>gi|325267738|ref|ZP_08134389.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Kingella denitrificans ATCC 33394]
 gi|324980862|gb|EGC16523.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Kingella denitrificans ATCC 33394]
          Length = 677

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   A++  ++S+      Y K     A    I    + K+  ++  +
Sbjct: 618 DEIAALEAEQADLNAQLSDPEIFKDYEKAGSLQARAEEIETLLLEKLERWEMLE 671


>gi|167508997|gb|ABZ81638.1| SiM protein [Streptococcus iniae]
          Length = 579

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 55/169 (32%), Gaps = 6/169 (3%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            K +   +    E+E +++E+ +     K+  E A +   I  +    +  +E   L+ +
Sbjct: 404 EKALEKAQAEAKELEAKLAETKA--ELEKVQAEKAELEATIETMK--KEHAEELDKLNAL 459

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
           + D    +E  +    ++    +    L NE    L  +     +    +I    G ++ 
Sbjct: 460 LADKEKLNEELNKMIADLKKELENQANLSNEEKAQLKAELEKLKQELAAKINMPMGNTKG 519

Query: 126 ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFS 174
                       +    +   V+    S  D  G     A+     V +
Sbjct: 520 M--ANGAGNAQTQANNGQNNTVKNQLPSTGDKAGNPFFTASAIAVMVGA 566


>gi|116327034|ref|YP_796754.1| ATP-binding protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116332307|ref|YP_802025.1| ATP-binding protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116119778|gb|ABJ77821.1| ATP-binding protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116125996|gb|ABJ77267.1| ATP-binding protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 647

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ-DLHTVI 66
           +I  L+     +E  +++            E   ++ + ++I+      +  Q +L  ++
Sbjct: 584 KIELLEKSKKNLEEVLADPDFFKN-RSYQLELDNLNEVKNEITRLTSAWESLQFELEDLL 642

Query: 67  G 67
            
Sbjct: 643 E 643


>gi|306823681|ref|ZP_07457056.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Bifidobacterium dentium ATCC 27679]
 gi|304553388|gb|EFM41300.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Bifidobacterium dentium ATCC 27679]
          Length = 740

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
            +++  L+ R AE+E +M+E      Y  L +    +  +  +    + +  E  +   
Sbjct: 683 ERKLAKLEERKAELESQMAEHD-PSDYEGLGKINGQLQAVADESESLEMEWMELSEQLE 740


>gi|258445569|ref|ZP_05693751.1| bacteriophage capsid protein [Staphylococcus aureus A6300]
 gi|257855616|gb|EEV78549.1| bacteriophage capsid protein [Staphylococcus aureus A6300]
          Length = 402

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K ++  
Sbjct: 31  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDTG 90

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + DH    + +       +   +  +        L      +D     L  +  +
Sbjct: 91  EAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 150

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 151 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFTT 210

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 211 NKFKVFAAISDTVIHGSDVDLVNWVE 236


>gi|117921830|ref|YP_871022.1| ABC transporter-like protein [Shewanella sp. ANA-3]
 gi|117614162|gb|ABK49616.1| ABC transporter related [Shewanella sp. ANA-3]
          Length = 637

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 10  CDLKNRFAEIELRMSESP--SVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQDLH 63
             L  R AE+E  +++S     D   KLT   +  + +   +      + + ++E   + 
Sbjct: 572 QKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDAME 631

Query: 64  TVI 66
             +
Sbjct: 632 LEL 634


>gi|325130163|gb|EGC52941.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           OX99.30304]
          Length = 636

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|254670733|emb|CBA06948.1| ABC transporter, ATP-binding protein [Neisseria meningitidis
           alpha153]
          Length = 636

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|229818442|ref|ZP_04448723.1| hypothetical protein BIFANG_03749 [Bifidobacterium angulatum DSM
           20098]
 gi|229784312|gb|EEP20426.1| hypothetical protein BIFANG_03749 [Bifidobacterium angulatum DSM
           20098]
          Length = 559

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I D   RF +I   M++  +   +  L EE   +   I   + +D    +       +  
Sbjct: 96  IADKVARFNQIGEEMADPNA--DFDALMEEMGKLQTEIDAANGWD-LDSQLDQAMDALQC 152

Query: 69  HNSDS 73
            + D+
Sbjct: 153 PDPDT 157


>gi|291001031|ref|XP_002683082.1| hypothetical protein NAEGRDRAFT_45002 [Naegleria gruberi]
 gi|284096711|gb|EFC50338.1| hypothetical protein NAEGRDRAFT_45002 [Naegleria gruberi]
          Length = 451

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 2/103 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSV-DAYIKLTEEYAAISPIISKISIYDQKKQEEQ-DLHT 64
           + I  + +R  + E  +S+  S+ +     ++    +  I  K    ++       DL  
Sbjct: 300 EDIEKINSRIQKREKMLSDDSSIGNLLANYSKNQQELDEITKKYKELEETISVLSGDLGK 359

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
           +  D +      +    ++          E  +      K  D
Sbjct: 360 INQDLSDIKVNAEDLTKKMADTTPLREIKEALVKIRNDIKQMD 402


>gi|220912919|ref|YP_002488228.1| ABC transporter ATP-binding protein [Arthrobacter chlorophenolicus
           A6]
 gi|219859797|gb|ACL40139.1| ABC transporter related [Arthrobacter chlorophenolicus A6]
          Length = 560

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
              RF EI   M+   +   Y  L EE   +   I     +D    + +     +    +
Sbjct: 99  KIQRFNEISEEMASPDA--DYDTLLEEMGKLQEAIDAADAWD-LDSQLEQAMDALRCPPA 155

Query: 72  DSE 74
           D++
Sbjct: 156 DAD 158


>gi|5051458|emb|CAB44978.1| putative ATP-binding protein [Neisseria meningitidis]
 gi|325142287|gb|EGC64701.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           961-5945]
 gi|325198260|gb|ADY93716.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           G2136]
          Length = 636

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|294790648|ref|ZP_06755806.1| ABC transporter, ATP-binding protein [Scardovia inopinata F0304]
 gi|294458545|gb|EFG26898.1| ABC transporter, ATP-binding protein [Scardovia inopinata F0304]
          Length = 559

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            I     RF +I   M+   +   +  L EE   +   I   + +D  + +       + 
Sbjct: 95  DIQQKVRRFNQIGEEMANPNA--DFDALMEEMGELQTAIDAANGWD-LESQLSQAMDALQ 151

Query: 68  DHNSDS 73
             + D+
Sbjct: 152 CPDPDT 157


>gi|161869934|ref|YP_001599103.1| ABC transporter ATP-binding protein [Neisseria meningitidis 053442]
 gi|161595487|gb|ABX73147.1| ABC transporter ATP-binding protein [Neisseria meningitidis 053442]
          Length = 641

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 580 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 633


>gi|325132091|gb|EGC54787.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           M6190]
 gi|325138024|gb|EGC60597.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           ES14902]
          Length = 636

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|302881995|ref|XP_003039908.1| hypothetical protein NECHADRAFT_85425 [Nectria haematococca mpVI
           77-13-4]
 gi|256720775|gb|EEU34195.1| hypothetical protein NECHADRAFT_85425 [Nectria haematococca mpVI
           77-13-4]
          Length = 751

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 6   HKQICDLKNRFAEIELRMSESPS--VDAYIKLTEEYAAISPIISKISIYDQK-KQEEQDL 62
             ++   KN+ AE+E ++S++         +LT++   +  IIS    +D    +   D 
Sbjct: 342 ENKLE--KNKSAELEKKLSDARDEYAKKEAELTKQIQDLQKIISGDRDHDAADHKALDDA 399

Query: 63  HTVIGDH 69
           H +I + 
Sbjct: 400 HQMIAEE 406


>gi|37527154|ref|NP_930498.1| hypothetical protein plu3274 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786588|emb|CAE15648.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 598

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 38/133 (28%), Gaps = 7/133 (5%)

Query: 8   QICDLKNRFAEIELR-------MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           ++  +  R  E+  R       +S++     Y  L+ E  ++   I  +        + Q
Sbjct: 351 KLRIINTRLNELGTRRSKSLSFLSDTEVFSKYKILSRELVSLRADIETLERQKAHLHKLQ 410

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +L T I   + +           +  +   +        L   +  D   S    +    
Sbjct: 411 ELRTEIRSLSEECSHLQSKIENNVESQNSDQASIFSQIRLYFSEIVDTVISRKALLSVSP 470

Query: 121 GGSEAALFVGDLF 133
                  F  ++ 
Sbjct: 471 NREGHLQFKAEIL 483


>gi|227543233|ref|ZP_03973282.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227181042|gb|EEI62014.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 491

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA-ISPIISK 48
            ++ DL  R   +  R++    +D Y++L ++Y+  ++ + S+
Sbjct: 376 DRLDDLHERLTALTARIASPAFIDEYVELLDDYSHTLAKVKSE 418


>gi|116873869|ref|YP_850650.1| NLP/P60 family protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742747|emb|CAK21871.1| NLP/P60 family protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 416

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHT 64
            K+I D+K++  +++  +S    V    K  E+  ++            Q  Q+ +D++ 
Sbjct: 37  DKKINDIKSKKTDLQSELSS--LVADLDKAQEKAKSLQGDFDKTGKELKQLNQDIKDINE 94

Query: 65  VIGDHNS 71
            I +  S
Sbjct: 95  RIKERES 101


>gi|16077804|ref|NP_388618.1| ABC protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|221308574|ref|ZP_03590421.1| hypothetical protein Bsubs1_04128 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312899|ref|ZP_03594704.1| hypothetical protein BsubsN3_04084 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317823|ref|ZP_03599117.1| hypothetical protein BsubsJ_04038 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322097|ref|ZP_03603391.1| hypothetical protein BsubsS_04129 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314467|ref|YP_004206754.1| putative ABC protein [Bacillus subtilis BSn5]
 gi|81814847|sp|O06476|YFMR_BACSU RecName: Full=Uncharacterized ABC transporter ATP-binding protein
           YfmR
 gi|2116756|dbj|BAA20107.1| YfmR [Bacillus subtilis]
 gi|2633050|emb|CAB12556.1| putative ABC protein involved in RecA-independent precise excision
           of transposons [Bacillus subtilis subsp. subtilis str.
           168]
 gi|320020741|gb|ADV95727.1| putative ABC protein involved in RecA-independent precise excision
           of transposons [Bacillus subtilis BSn5]
          Length = 629

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 7/67 (10%)

Query: 6   HKQICDLKNRFAEIELRM-SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
             +I  L+ +  ++E  + +         +L  E A            +       +L  
Sbjct: 569 EDKIAQLEEKHEQLEADIAAAGSDFGKIQELMAEQA------KTAEELEAAMDRWTELSL 622

Query: 65  VIGDHNS 71
           +I +  S
Sbjct: 623 MIEELES 629


>gi|15239256|ref|NP_196204.1| leucine-rich repeat family protein [Arabidopsis thaliana]
 gi|9759110|dbj|BAB09679.1| unnamed protein product [Arabidopsis thaliana]
 gi|53850485|gb|AAU95419.1| At5g05850 [Arabidopsis thaliana]
 gi|55733731|gb|AAV59262.1| At5g05850 [Arabidopsis thaliana]
 gi|57868144|gb|AAW57410.1| plant intracellular Ras-group-related LRR protein 1 [Arabidopsis
           thaliana]
 gi|110737851|dbj|BAF00864.1| hypothetical protein [Arabidopsis thaliana]
 gi|332003549|gb|AED90932.1| plant intracellular ras group-related LRR 1 [Arabidopsis thaliana]
          Length = 506

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/75 (12%), Positives = 23/75 (30%), Gaps = 8/75 (10%)

Query: 5   SHKQICDLKNRFAEIELRMSE--------SPSVDAYIKLTEEYAAISPIISKISIYDQKK 56
            H+ +   + R  EI+  +SE           +D   K  +   A+           +  
Sbjct: 90  DHETVDRARARLREIDASLSESFEEIALSPNDIDVAEKEQKRREAVEQEKIWYKSILKLN 149

Query: 57  QEEQDLHTVIGDHNS 71
           +  +    ++ +   
Sbjct: 150 ELHESYEKLLKEAEE 164


>gi|121634824|ref|YP_975069.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis FAM18]
 gi|120866530|emb|CAM10280.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis FAM18]
          Length = 641

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 580 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 633


>gi|308389211|gb|ADO31531.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis alpha710]
          Length = 635

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 574 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 627


>gi|289435766|ref|YP_003465638.1| NLP/P60 family protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172010|emb|CBH28556.1| NLP/P60 family protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 411

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKI-SIYDQKKQEEQDLHT 64
            K+I D+K++ A+++  +S+   V    K  E+  ++     K         Q+ +D++ 
Sbjct: 37  DKKINDIKSQKADLQSDLSD--LVSDLDKAQEKAKSLQADFDKTGKELKDLNQDIKDINE 94

Query: 65  VIGDHNS 71
            I +  S
Sbjct: 95  RIKERES 101


>gi|207108877|ref|ZP_03243039.1| peptide chain release factor 2 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 85

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 15/55 (27%), Gaps = 3/55 (5%)

Query: 10 CDLKNRFAEIELRMSESPSVDAYIKL---TEEYAAISPIISKISIYDQKKQEEQD 61
            +K     IE    +       +K     +E   ++ ++           E  D
Sbjct: 27 EKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVD 81


>gi|296876425|ref|ZP_06900477.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus parasanguinis ATCC 15912]
 gi|296432715|gb|EFH18510.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus parasanguinis ATCC 15912]
          Length = 622

 Score = 37.1 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYDQKKQEEQD 61
            I  ++NR AEIE+ M+E+     + KL+     +      ++ K   Y+    E  +
Sbjct: 568 DIEAIENRIAEIEVEMNENG--SDFGKLSALQKELDQENERLLEKYDRYE-YLSELDE 622


>gi|257428231|ref|ZP_05604629.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|258455561|ref|ZP_05703518.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|282905857|ref|ZP_06313712.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|257275072|gb|EEV06559.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257862249|gb|EEV85020.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|282331149|gb|EFB60663.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 402

 Score = 37.1 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 10  CDLKNRFAEIELRMSESP-SVDAYIKLTEEYAAI-------SPIISKISIYDQKK-QEEQ 60
             LKN+  E+  + ++    ++   +L  E A +          +  I   ++ K ++  
Sbjct: 31  QQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDTG 90

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           + +  + D+    + +       +   +  +        L      +D     L  +  +
Sbjct: 91  EAYQSLNDNEKLVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLS 150

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFES 180
               +  F  +  R   R   ++  ++  +S + +DD    ++      +     +KF +
Sbjct: 151 KEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFTT 210

Query: 181 GVHR-VQRVPATEASGRVHTSAATVA 205
              +    +  T   G        V 
Sbjct: 211 NKFKVFAAISDTVIHGSDVDLVNWVE 236


>gi|108712217|gb|ABG00012.1| RuBisCO subunit binding-protein alpha subunit, chloroplast
           precursor, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 479

 Score = 37.1 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +++ R A+++  +S++ S     KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 275 DEIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 334

Query: 70  NS 71
            +
Sbjct: 335 KN 336


>gi|150015795|ref|YP_001308049.1| HK97 family phage major capsid protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902260|gb|ABR33093.1| phage major capsid protein, HK97 family [Clostridium beijerinckii
           NCIMB 8052]
          Length = 400

 Score = 37.1 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 42/98 (42%), Gaps = 2/98 (2%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           K + ++ +R AE+   + +  +    + + +E   ++ + ++I   ++  +E  +++   
Sbjct: 2   KTLKEIASRKAELRTMLEDPKA--DLVAIEKELRELNEMQNQIETRERLIKEAGEINAGK 59

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPK 104
                ++ I  + +  V   E +   LE    ++   +
Sbjct: 60  AGEKRETFIPGVKKEVVEEREDKYSTLEYRKAFMNYAR 97


>gi|113969085|ref|YP_732878.1| ABC transporter-like protein [Shewanella sp. MR-4]
 gi|114048771|ref|YP_739321.1| ABC transporter-like protein [Shewanella sp. MR-7]
 gi|113883769|gb|ABI37821.1| ABC transporter related [Shewanella sp. MR-4]
 gi|113890213|gb|ABI44264.1| ABC transporter related [Shewanella sp. MR-7]
          Length = 637

 Score = 37.1 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 8/64 (12%)

Query: 10  CDLKNRFAEIELRMSESP--SVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQ--D 61
             L  R AE+E  +++S     D   KLT   +  + +   +      + + ++E    +
Sbjct: 572 QKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDSME 631

Query: 62  LHTV 65
           L  +
Sbjct: 632 LELM 635


>gi|313232328|emb|CBY09437.1| unnamed protein product [Oikopleura dioica]
          Length = 1115

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/129 (9%), Positives = 38/129 (29%), Gaps = 3/129 (2%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT- 64
            ++  + +     +E   S  P    + K  +     + ++       + K+ E +  T 
Sbjct: 273 KRKAEEREKELDSLEKWTSVPPIQAQFKKAQKRIKDYTKVVDSFEQKIKDKKAEIESETV 332

Query: 65  --VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
             +  +     +  +  ++ +  +  E +  E+  +         +D       +     
Sbjct: 333 EGLEREMQRVMDESEEYRVVIKKVVSEKKLYESRRDKDNAAAQDLEDSVTRATRKMNANK 392

Query: 123 SEAALFVGD 131
                F  D
Sbjct: 393 KALNAFKKD 401


>gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
 gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
          Length = 180

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER-KR 284
               G GGQ +N ++S V++TH PTGI+V     +SQ QNR +A ++L  +L +++  + 
Sbjct: 60  KGGRGPGGQKINKSNSKVQLTHKPTGIVVTCQYSRSQEQNRKKAREILALKLEELQDPEN 119

Query: 285 MANERSANRKLQI 297
                   RK  +
Sbjct: 120 SRTAILNKRKSMV 132


>gi|256832163|ref|YP_003160890.1| ABC transporter-like protein [Jonesia denitrificans DSM 20603]
 gi|256685694|gb|ACV08587.1| ABC transporter related [Jonesia denitrificans DSM 20603]
          Length = 560

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M+E  +   +  L  E   +   +   + +D    + +     +  
Sbjct: 96  IKGKLDRFNEISALMAEPDA--DFDTLLAEMGELQEALDHANAWD-LDNQLEQAMDALRC 152

Query: 69  HNSDSE 74
              D++
Sbjct: 153 PPPDAD 158


>gi|295702444|ref|YP_003595519.1| putative ABC transporter ATP-binding protein [Bacillus megaterium
           DSM 319]
 gi|294800103|gb|ADF37169.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium
           DSM 319]
          Length = 644

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYD 53
           +  ++     +E +M +    +    Y KLT+EY  +      +  Y 
Sbjct: 94  LKKMEKELRTLETKMGDPDIFNDSVQYEKLTKEYDQLQVTFKDLGGYQ 141


>gi|149391059|gb|ABR25547.1| rubisco large subunit-binding protein subunit alpha [Oryza sativa
          Indica Group]
          Length = 206

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%)

Query: 10 CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           +++ R A+++  +SE+ S+    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 3  DEIQARVAQLKKELSETDSIYDTEKLAERIAKLSGGVAVIKVGAATETELEDRQLRIEDA 62

Query: 70 NS 71
           +
Sbjct: 63 KN 64


>gi|325268693|ref|ZP_08135322.1| mobilization protein [Prevotella multiformis DSM 16608]
 gi|324988937|gb|EGC20891.1| mobilization protein [Prevotella multiformis DSM 16608]
          Length = 418

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/124 (9%), Positives = 29/124 (23%), Gaps = 6/124 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI-SPIISKISIYDQKKQEEQDLHTVIG 67
           +   + R  E+E  M     +       +E A I   +I        + +   +L   + 
Sbjct: 257 LDKAEKRIEELEREMERQKFLSE-----KEKAEIRKEVILLQDTVRGRDRTIAELKETMQ 311

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAAL 127
            +  +             +      L           +    ++          G     
Sbjct: 312 VYEEERNWIKRFFNGFYQLLNIRLMLRKMNFSDDRIAEMYRTEAPQQGTAKAYSGLYKRE 371

Query: 128 FVGD 131
           F  +
Sbjct: 372 FTEE 375


>gi|218768114|ref|YP_002342626.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis Z2491]
 gi|5051450|emb|CAB44971.1| putative ATP-binding protein [Neisseria meningitidis]
 gi|121052122|emb|CAM08438.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis Z2491]
 gi|319410355|emb|CBY90706.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis WUE 2594]
          Length = 636

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|312877421|ref|ZP_07737385.1| chromosome segregation ATPase-like protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795810|gb|EFR12175.1| chromosome segregation ATPase-like protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 1350

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 6/127 (4%)

Query: 2   VFLSHKQICDLKNRFAEIE----LRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           +F   K++ ++K    E+E     ++S+     A  KL +E   +  +  ++  Y +K +
Sbjct: 333 IFKLQKELLNIKEELRELEEQKNKKLSQIN--SASQKLEKERQQLIALEEELEKYKRKIK 390

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++ +        +   + +L         +   ++L   +    +   + EI+
Sbjct: 391 DSVEEGKLLIESIGFQRFSETLDMYLLEQGSLDILKDELSSFLSQVEIALKNYEKLNEIK 450

Query: 118 AGTGGSE 124
               G  
Sbjct: 451 KDLDGLY 457


>gi|254804931|ref|YP_003083152.1| ABC transporter ATP-binding protein [Neisseria meningitidis
           alpha14]
 gi|254668473|emb|CBA05763.1| ABC transporter ATP-binding protein [Neisseria meningitidis
           alpha14]
          Length = 636

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|77361807|ref|YP_341382.1| ABC transporter ATP-binding protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876718|emb|CAI87940.1| putative ABC transporter, ATP-binding protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 640

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 5/70 (7%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            KQ+        E+E+ + ++       K     A +  +++K +    K  + ++   +
Sbjct: 568 EKQLDKYAAELNEVEVALGDNELYSDDNK-----AKLKELLAKQATLTPKLNDIEEALLM 622

Query: 66  IGDHNSDSEI 75
             D     E 
Sbjct: 623 ALDEMEQKEQ 632


>gi|226943534|ref|YP_002798607.1| ABC transporter ATP binding protein [Azotobacter vinelandii DJ]
 gi|226718461|gb|ACO77632.1| ABC transporter, ATP binding component [Azotobacter vinelandii DJ]
          Length = 639

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDA-YIKLTEEYAAISPIISKISIYDQKKQEEQDL 62
           QI  L+   AE++ R+++         +     A +  +  ++    ++  E ++ 
Sbjct: 584 QIDALEAELAELQERIADPAFYQQPAAQTAPLLARLESLQQELDRLLERWAELEEA 639


>gi|332665930|ref|YP_004448718.1| hypothetical protein Halhy_3997 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334744|gb|AEE51845.1| hypothetical protein Halhy_3997 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 1111

 Score = 37.1 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 3   FLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEE-YAAISPIISKISIYDQKKQEEQD 61
           + + KQ+  L  R  E+E +      +    K  EE       +        +K++  ++
Sbjct: 546 WQTRKQLEKLLERQKELEKQ------IKEAQKAFEENKKNQEQLGETPEELQEKQEMLEE 599

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
           L   + D      +  + ++     + +   LE         +  +++   + E+   
Sbjct: 600 LMESLEDPEMKELMEKIEKLMQEMEKDQA--LEMMEQMKDQNEKRENELERMEELFKQ 655


>gi|258515486|ref|YP_003191708.1| hypothetical protein Dtox_2271 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257779191|gb|ACV63085.1| hypothetical protein Dtox_2271 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 214

 Score = 37.1 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYA----AISPIISKISIYDQKKQEEQDLH 63
           ++  + +    I   +S++      +K T+E A     +  I   I+       + +DL+
Sbjct: 17  KLKAIIDERNNIHTLLSQNDINTDPLK-TKELAIKLHELEQICEVINDLKSYAGDLRDLN 75

Query: 64  TV--IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCI 113
            +    D  +D + + L +       +   +L N +    +  +  +D+  +
Sbjct: 76  EMSLFEDFKTDIDFQRLLKQTADRCNERAVKLYNWLMQKGMLDEEIEDEKDM 127


>gi|213583737|ref|ZP_03365563.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 147

 Score = 37.1 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 35/64 (54%)

Query: 196 RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV 255
           R H       V       D  I  ++IR +T+R+SG GGQHVN TDSAVR TH+ +GI V
Sbjct: 83  RPHHGRKNWYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISV 142

Query: 256 TSSE 259
               
Sbjct: 143 KVQS 146


>gi|74190853|dbj|BAE28211.1| unnamed protein product [Mus musculus]
          Length = 506

 Score = 37.1 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 61/170 (35%), Gaps = 18/170 (10%)

Query: 8   QICDLKNRFA-EIE-------LRMSESPSVDAY-----IKLTEEYAAISPIISKISIYDQ 54
           Q+  L N+++ E+E        + ++  + D        K+T  +  +  +       DQ
Sbjct: 336 QLESLINKWSLELEDQERHFLQQATQVNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQ 395

Query: 55  ----KKQEEQDLHTVIG-DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDD 109
                  ++++L  ++     S  E      ++    E+E      E     L +   D 
Sbjct: 396 ELDFILSQQKELEDLLSPLEESVKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQDL 455

Query: 110 KSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGG 159
           K  I  +    G ++ +  +  + ++   +    +W  +  + +  + GG
Sbjct: 456 KDIIEHLNMAGGPADTSDPLQQICKILNAHMDSLQWVDQSSALAAEEGGG 505


>gi|294497079|ref|YP_003560779.1| putative ABC transporter ATP-binding protein [Bacillus megaterium
           QM B1551]
 gi|294347016|gb|ADE67345.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium
           QM B1551]
          Length = 644

 Score = 37.1 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 9   ICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYD 53
           +  ++     +E +M +    +    Y KLT+EY  +      +  Y 
Sbjct: 94  LKKMEKELRTLETKMGDPDIFNDSVQYEKLTKEYDQLQVTFKDLGGYQ 141


>gi|149601712|ref|XP_001516761.1| PREDICTED: similar to leucine zipper protein 1, partial
           [Ornithorhynchus anatinus]
          Length = 860

 Score = 36.7 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 35/130 (26%), Gaps = 7/130 (5%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQ-KKQEEQDLH 63
              ++  L  R  E+E             K  EE   +   +++    +     E + L 
Sbjct: 8   MRFKVQSLGRRLDELEEAT------KNLQKAEEELLELQDKVTQAEGSNSGLLAEVEALR 61

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
             +       E    A+     ++ ++ E E +   L    +    +   LE      G 
Sbjct: 62  KRVLRIEGKDEELQRAEGLCQLLKAKLEEEEGQSRGLRSEMERLQRRMAQLEKLEEAFGR 121

Query: 124 EAALFVGDLF 133
                     
Sbjct: 122 SKNDCTQLCL 131


>gi|327393366|dbj|BAK10788.1| ABC transporter ATP-binding protein Uup [Pantoea ananatis AJ13355]
          Length = 639

 Score = 36.7 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 6/59 (10%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           +++  L+ R  E++ +MS            +    +  +       +      ++L ++
Sbjct: 579 QKLEQLEARIGELQAKMSHPDFFSQPHD--KTQPVLDELADVEQQLETAFARWEELESL 635


>gi|145546071|ref|XP_001458719.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426540|emb|CAK91322.1| unnamed protein product [Paramecium tetraurelia]
          Length = 248

 Score = 36.7 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 46/113 (40%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            +++ +L+ +  ++E +           +L++ Y+ I  +++ I I  ++ Q  Q+  ++
Sbjct: 93  KQKVQELQRKVQQLEQQQKNEDFDQNESELSQVYSQIQQLVNTIKILQEEIQNMQEKLSI 152

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRA 118
                   + + +A+ + L  +    +  +        +  D  K  + EI  
Sbjct: 153 KQHIIDGYDSQLIAKDKELEDQNHYIQDLHNQLEEQTLQMEDKQKFLLDEIST 205


>gi|119472468|ref|ZP_01614567.1| putative orphan protein [Alteromonadales bacterium TW-7]
 gi|119444905|gb|EAW26204.1| putative orphan protein [Alteromonadales bacterium TW-7]
          Length = 893

 Score = 36.7 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 39/133 (29%), Gaps = 14/133 (10%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPII-----------SKISIYDQKKQ 57
           + ++K   AE+E +++++     Y    +  A +  +             +       + 
Sbjct: 476 LENIK---AELEQQLADAKDWQKYAAAPKRVALLEEVAALTEQECTDPQQRAEQVKMFRT 532

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
              +L  +  D      ++    IE+L         E E N        +   + +  + 
Sbjct: 533 RWNELGRLDTDEEKQQGVQFDEHIELLFAPCRSYFAEQEKNRDAAKLQRESIITDMHALS 592

Query: 118 AGTGGSEAALFVG 130
                 E   +  
Sbjct: 593 TEPTSEEGFDWKQ 605


>gi|78184486|ref|YP_376921.1| ATPase [Synechococcus sp. CC9902]
 gi|78168780|gb|ABB25877.1| ATPase [Synechococcus sp. CC9902]
          Length = 862

 Score = 36.7 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 7   KQICDLKNRFAEIE-LRMS-----ESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEE 59
           +QI ++  +  ++E  ++S     +S S +   ++  E + +S   S ++  + Q+K   
Sbjct: 411 EQIDEIDRKILQLEMEKLSLGRESDSASQERLQRIERELSELSEQQSNLNAQWQQEKGAI 470

Query: 60  QDLHTVIGDHN 70
            ++ ++  +  
Sbjct: 471 DEISSLKEEME 481


>gi|328946151|gb|EGG40296.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis SK1087]
          Length = 622

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
            I  L+ R +EIE  M E+     + +L++    +      ++ K   Y+
Sbjct: 568 DIEALEERISEIEAAMQENG--SDFARLSQLQQELDEQNEKLLEKYERYE 615


>gi|296331832|ref|ZP_06874297.1| putative ABC protein involved in RecA-independent precise excision
           of transposons [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305673444|ref|YP_003865116.1| putative ABC protein involved in RecA-independent precise excision
           of transposons [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150910|gb|EFG91794.1| putative ABC protein involved in RecA-independent precise excision
           of transposons [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411688|gb|ADM36807.1| putative ABC protein involved in RecA-independent precise excision
           of transposons [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 629

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 7/67 (10%)

Query: 6   HKQICDLKNRFAEIELRM-SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
             +I  L+ +  ++E  + +         +L  E A            +       +L  
Sbjct: 569 EDKIAQLEEKHEQLEADIAAAGSDFGKIQELMAEQA------KTAEELEAAMDRWTELSL 622

Query: 65  VIGDHNS 71
           +I +  S
Sbjct: 623 MIEELES 629


>gi|291483186|dbj|BAI84261.1| hypothetical protein BSNT_01256 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 629

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 7/67 (10%)

Query: 6   HKQICDLKNRFAEIELRM-SESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
             +I  L+ +  ++E  + +         +L  E A            +       +L  
Sbjct: 569 EDKIAQLEEKHEQLEADIAAAGSDFGKIQELMAEQA------KTAEELEAAMDRWTELSL 622

Query: 65  VIGDHNS 71
           +I +  S
Sbjct: 623 MIEELES 629


>gi|317130082|ref|YP_004096364.1| LPXTG-motif cell wall anchor domain protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475030|gb|ADU31633.1| LPXTG-motif cell wall anchor domain protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 786

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 46/140 (32%), Gaps = 8/140 (5%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS-PIISKISIYDQ-------KKQ 57
            +++ +L+++  E+  R+ E  + +   +L      +   +++  + YD         +Q
Sbjct: 624 EQKVAELESQIEELNERLQELENNNEIDQLQLMVDELEAELVALSAQYDDVEALVTMLEQ 683

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           + + L   I +  +D E   +   +    + E+         L +  ++D          
Sbjct: 684 QVESLKAQIEELMTDEESTSIETGDEKTSDSELENGAKSEEALEVADESDSSNESAGATS 743

Query: 118 AGTGGSEAALFVGDLFRMYE 137
               G          F    
Sbjct: 744 DEDKGDRLPDTATSTFNYLL 763


>gi|291001053|ref|XP_002683093.1| predicted protein [Naegleria gruberi]
 gi|284096722|gb|EFC50349.1| predicted protein [Naegleria gruberi]
          Length = 1072

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 5   SHKQICDLKNRFAEIELRMS--ESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQD 61
           + ++I DL+N   E++ +M+  ES   +   +L +E  +      KI     + ++E+Q 
Sbjct: 728 TRQKISDLENEIEELKQKMTAKESSLKEEIDQLQKEINSWRETDQKIKSELKKIEKEKQS 787

Query: 62  LHTVIGDHN 70
           L  VI   N
Sbjct: 788 LEQVIKKEN 796


>gi|225432464|ref|XP_002277269.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 893

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 29/83 (34%), Gaps = 15/83 (18%)

Query: 3   FLSHKQ----ICDLKNRFAEIELRMSESPSVDA------YIKLTEEYAAISPI---ISKI 49
           ++   +    I  L  R  E++ ++ E              +L ++ A +  +     ++
Sbjct: 534 WVPQDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEV 593

Query: 50  SIYDQKKQEEQD--LHTVIGDHN 70
               ++KQ  +D     +    N
Sbjct: 594 ERLKKEKQTLEDNTAKKLSEMEN 616


>gi|118572263|sp|Q07DY4|CTTB2_COLGU RecName: Full=Cortactin-binding protein 2; Short=CortBP2
 gi|115520980|gb|ABJ08858.1| cortactin-binding protein 2 [Colobus guereza]
          Length = 1663

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 39/103 (37%), Gaps = 15/103 (14%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI-------------KLTEEYAAISPIISKIS 50
           +   Q+  L+    ++  R+ E    +  +             K+ EE   +  I++K+ 
Sbjct: 141 MEKLQLQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDIMAKLE 200

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIREL 93
              +K  E ++   +  +    +E+    + ++   + E  +L
Sbjct: 201 EEKKKTNELEE--ELSAEKRRSTEMEAQMEKQLSEFDTEREQL 241


>gi|114615619|ref|XP_519331.2| PREDICTED: cortactin-binding protein 2 [Pan troglodytes]
          Length = 1665

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 39/103 (37%), Gaps = 15/103 (14%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI-------------KLTEEYAAISPIISKIS 50
           +   Q+  L+    ++  R+ E    +  +             K+ EE   +  I++K+ 
Sbjct: 141 MEKLQLQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDIMAKLE 200

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIREL 93
              +K  E ++   +  +    +E+    + ++   + E  +L
Sbjct: 201 EEKKKTNELEE--ELSAEKRRSTEMEAQMEKQLSEFDTEREQL 241


>gi|281183262|ref|NP_001162186.1| cortactin-binding protein 2 [Papio anubis]
 gi|158512456|sp|A0M8S4|CTTB2_PAPAN RecName: Full=Cortactin-binding protein 2; Short=CortBP2
 gi|38322669|gb|AAR16228.1| cortactin-binding protein 2 [Papio anubis]
          Length = 1663

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 39/103 (37%), Gaps = 15/103 (14%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI-------------KLTEEYAAISPIISKIS 50
           +   Q+  L+    ++  R+ E    +  +             K+ EE   +  I++K+ 
Sbjct: 141 MEKLQLQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDIMAKLE 200

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIREL 93
              +K  E ++   +  +    +E+    + ++   + E  +L
Sbjct: 201 EEKKKTNELEE--ELSAEKRRSTEMEAQMEKQLSEFDTEREQL 241


>gi|274319891|ref|NP_001162096.1| cortactin-binding protein 2 [Macaca mulatta]
 gi|68270991|gb|AAY89008.1| cortactin-binding protein 2 [Macaca mulatta]
          Length = 1661

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 39/103 (37%), Gaps = 15/103 (14%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI-------------KLTEEYAAISPIISKIS 50
           +   Q+  L+    ++  R+ E    +  +             K+ EE   +  I++K+ 
Sbjct: 141 MEKLQLQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDIMAKLE 200

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIREL 93
              +K  E ++   +  +    +E+    + ++   + E  +L
Sbjct: 201 EEKKKTNELEE--ELSAEKRRSTEMEAQMEKQLSEFDTEREQL 241


>gi|327474159|gb|EGF19569.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis SK408]
          Length = 622

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
            I  L+ R +EIE  M E+     + +L++    +      ++ K   Y+
Sbjct: 568 DIEALEERISEIEAAMQENG--SDFARLSQLQQELDEQNEKLLEKYERYE 615


>gi|255548630|ref|XP_002515371.1| sensor histidine kinase, putative [Ricinus communis]
 gi|223545315|gb|EEF46820.1| sensor histidine kinase, putative [Ricinus communis]
          Length = 930

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 69/219 (31%), Gaps = 18/219 (8%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K R  ++E  +  S        +  E   I  +   I   +++    ++L  ++   ++ 
Sbjct: 171 KQRTMDLEKLLEAS--------IQREQVLIEKLQESIKDLERQSSPVEELSQILKRADNF 222

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDL 132
                     V+  + +        N+     + D      +EI +G G  E+  F    
Sbjct: 223 LHFILQNAPVVMGHQDKELRYRFIYNHFPRLGEEDILGKTDMEIFSGAGVKESQDFK--- 279

Query: 133 FRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPATE 192
                R    +    +   + + +  G K     I    VFS+     G++ +      +
Sbjct: 280 -----REVLEKGLPAKREITFETELFGSK--TFLIYVEPVFSKSGVTIGINYMGMDVTDQ 332

Query: 193 ASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASG 231
              R   +     +  + A+         I  +TMRA  
Sbjct: 333 VRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAKQ 371


>gi|312792498|ref|YP_004025421.1| chromosome segregation atpase-like protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179638|gb|ADQ39808.1| chromosome segregation ATPase-like protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 1350

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 6/127 (4%)

Query: 2   VFLSHKQICDLKNRFAEIE----LRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           +F   K++ ++K    E+E     ++S+     A  KL +E   +  +  ++  Y +K +
Sbjct: 333 IFKLQKELLNIKEELRELEEQKNKKLSQIN--SASQKLEKERQQLIALEEELEKYKRKIK 390

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIR 117
           +  +   ++ +        +   + +L         +   ++L   +    +   + EI+
Sbjct: 391 DSVEEGKLLIESIGFQRFSETLDMYLLEQGSLDILKDELSSFLSQVEIALKNYEKLNEIK 450

Query: 118 AGTGGSE 124
               G  
Sbjct: 451 KDLDGLY 457


>gi|154497035|ref|ZP_02035731.1| hypothetical protein BACCAP_01328 [Bacteroides capillosus ATCC
           29799]
 gi|150273434|gb|EDN00562.1| hypothetical protein BACCAP_01328 [Bacteroides capillosus ATCC
           29799]
          Length = 418

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEE----YAAISPIISKISIYDQKKQEEQD 61
            +Q+  L     +I   +S +  +    KL++E     A++   ++    + Q + +  +
Sbjct: 98  RQQLNTLSQELEQINYSLSHTDDLSDNAKLSQEILTQIASLRSSVAS-RDFTQLEDDTME 156

Query: 62  LHTVI 66
           L T++
Sbjct: 157 LRTLV 161


>gi|327470123|gb|EGF15587.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis SK330]
          Length = 622

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
            I  L+ R +EIE  M E+     + +L++    +      ++ K   Y+
Sbjct: 568 DIEALEERISEIEAAMQENG--SDFARLSQLQQELDEQNEKLLEKYERYE 615


>gi|322389620|ref|ZP_08063168.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus parasanguinis ATCC 903]
 gi|321143619|gb|EFX39049.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus parasanguinis ATCC 903]
          Length = 622

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYDQKKQEEQD 61
            I  ++NR AEIE+ M+E+     + KL+     +      ++ K   Y+    E  +
Sbjct: 568 DIEAIENRIAEIEVEMNENG--SDFGKLSALQKELDQENERLLEKYDRYE-YLSELDE 622


>gi|255551557|ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
 gi|223543912|gb|EEF45438.1| conserved hypothetical protein [Ricinus communis]
          Length = 894

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 29/72 (40%), Gaps = 10/72 (13%)

Query: 3   FLSHKQICDLKNRF----AEIELRMSESPSVDA------YIKLTEEYAAISPIISKISIY 52
           ++   +  ++  +      E++ ++ E              +L+++ A +  +  +    
Sbjct: 538 WVPRDKKDEMIMKLVPRARELQNQLQEWTEWANQKVMQAARRLSKDKAELKSLRQEKEEV 597

Query: 53  DQKKQEEQDLHT 64
           ++ K+E+Q L  
Sbjct: 598 ERLKKEKQTLEE 609


>gi|308446889|ref|XP_003087284.1| hypothetical protein CRE_20178 [Caenorhabditis remanei]
 gi|308257959|gb|EFP01912.1| hypothetical protein CRE_20178 [Caenorhabditis remanei]
          Length = 734

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYD---QKKQEEQDLHT 64
           I    +RF EI   M+E  +   +  L  E   +   I     +D   Q +Q    L T
Sbjct: 123 IKAKVDRFNEISALMAEPDA--DFDALLAEMGTLQEEIDAADGWDLDNQLEQAMDALRT 179


>gi|17532007|ref|NP_495360.1| hypothetical protein C18H9.3 [Caenorhabditis elegans]
 gi|722383|gb|AAC46688.1| Hypothetical protein C18H9.3 [Caenorhabditis elegans]
          Length = 918

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 12  LKNRFAEIELRMSES--PSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           L+ R  EIE R +ES         KL +E   I    + +   D++K+E ++ + +    
Sbjct: 541 LQKRAEEIEKREAESKREEAARLQKLEQEAREIEERKAALEAEDRRKREIEEYNRMCEKK 600

Query: 70  NSDSEIRDLAQIE 82
            ++   ++ A   
Sbjct: 601 KNEIIAKEAADRM 613


>gi|226329252|ref|ZP_03804770.1| hypothetical protein PROPEN_03155 [Proteus penneri ATCC 35198]
 gi|225202438|gb|EEG84792.1| hypothetical protein PROPEN_03155 [Proteus penneri ATCC 35198]
          Length = 548

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 3/87 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + +  NR  E+    ++  +   + KL +E   +  II         + + +     +  
Sbjct: 90  LKNALNRLDEVYAAYADPDA--DFDKLAKEQGQLEAIIQSHDG-HNLENQLERAAEALRL 146

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELEN 95
              D++I  L+  E   +      LE 
Sbjct: 147 PEWDAKIEKLSGGERRRVAICRLLLEK 173


>gi|269926323|ref|YP_003322946.1| ATP-dependent chaperone ClpB [Thermobaculum terrenum ATCC BAA-798]
 gi|269789983|gb|ACZ42124.1| ATP-dependent chaperone ClpB [Thermobaculum terrenum ATCC BAA-798]
          Length = 867

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 9   ICDLKNRFAEIE------LRMSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQD 61
           + +L+ R  ++E       + ++  S +    L +E A +      +   ++++K   Q+
Sbjct: 412 LDELERRILQLEIEREALKKETDEASKERLANLEKELADLKEKREALRMQWEREKSLLQE 471

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTG 121
           +++V    +      + A+           +  +  N     K+ ++  +   E R    
Sbjct: 472 INSVKESIDRVKHEIEQAERNYDYNRAAQLKYSDLTNLERRLKELEEQLARTSENRMVQE 531

Query: 122 GSEAALFVGDLFR 134
                     + R
Sbjct: 532 EVTEEDIAEVVSR 544


>gi|303272845|ref|XP_003055784.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463758|gb|EEH61036.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 590

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 31/62 (50%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            ++  R A+++  ++E+ S+    KL+E  A +S  ++ I +    + E +D    I D 
Sbjct: 380 DEIDIRVAQLKQELAETDSIYDTQKLSERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 439

Query: 70  NS 71
            +
Sbjct: 440 KN 441


>gi|256086971|ref|XP_002579655.1| myosin heavy chain [Schistosoma mansoni]
 gi|238665123|emb|CAZ35894.1| myosin heavy chain, putative [Schistosoma mansoni]
          Length = 1591

 Score = 36.7 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           D++ R  E+E R+++    D    LTE    +S      +  ++ K++ +DL + +    
Sbjct: 891 DMEQRIKELEERLADEE--DQAANLTEVKKKMS------AEIEELKKDVEDLESSLQKAE 942

Query: 71  SDSEIRDLAQIEVLAIEKEIREL 93
            + + +D     + +   +  E+
Sbjct: 943 QEKQTKDNQIRTLQSEMAQQDEM 965


>gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 491

 Score = 36.7 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
             A    ++  +D+    +R SG GGQ  N T + V + H PT + V     +S  QNR 
Sbjct: 380 YTARELPELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPTQLRVECQDTRSLQQNRK 439

Query: 268 RAMKVLRARLYDV 280
            A K LRA+L + 
Sbjct: 440 IARKRLRAKLDEF 452


>gi|149193952|ref|ZP_01871050.1| hypothetical protein CMTB2_02668 [Caminibacter mediatlanticus TB-2]
 gi|149135905|gb|EDM24383.1| hypothetical protein CMTB2_02668 [Caminibacter mediatlanticus TB-2]
          Length = 908

 Score = 36.7 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           +  + + +  +   +  ++EL        +  +K  +E   ++  I          ++ +
Sbjct: 627 LKMIKNNKFKNSSRKIEKVELLKILDSFWNEKVKKLKEIKILTDEIIHYQKMCAILED-E 685

Query: 61  DLHTVIGDHNSDSEIRDLA 79
           DL  +  D     +     
Sbjct: 686 DLKELEKDLKEIKDRAKCP 704


>gi|197117086|ref|YP_002137513.1| ABC transporter ATP-binding protein [Geobacter bemidjiensis Bem]
 gi|197086446|gb|ACH37717.1| ABC transporter, ATP-binding protein [Geobacter bemidjiensis Bem]
          Length = 648

 Score = 36.7 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 4/54 (7%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAI-SPIISKISIYDQK 55
            ++I   +   AE+E  M+               E +A +   I S    ++  
Sbjct: 595 EQKIAVKEGELAELEQAMAAPDFFSDHEAARLAGERHAQLTEEIASLYQAWESA 648


>gi|327460440|gb|EGF06777.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis SK1057]
          Length = 622

 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
            I  L+ R +EIE  M E+     + +L++    +      ++ K   Y+
Sbjct: 568 DIEALEERISEIEAAMQENG--SDFARLSQLQQELDEQNEKLLEKYERYE 615


>gi|11498824|ref|NP_070053.1| hypothetical protein AF1225 [Archaeoglobus fulgidus DSM 4304]
 gi|24638391|sp|O29043|Y1225_ARCFU RecName: Full=Uncharacterized protein AF_1225; Flags: Precursor
 gi|2649363|gb|AAB90025.1| predicted coding region AF_1225 [Archaeoglobus fulgidus DSM 4304]
          Length = 212

 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDL 62
           +S +QI  LK++  +++ +       +   K   E   +   + +      +KK +  +L
Sbjct: 116 ISQEQIETLKSQLEDLQNKAKMLGIQNELQKQQIE--ELQKKLERAKTELQKKKSDLDEL 173

Query: 63  HTVIGDHN 70
              I + N
Sbjct: 174 EEKIRELN 181


>gi|324558223|gb|ADY49829.1| Peptide chain release factor 1 [Ascaris suum]
          Length = 51

 Score = 36.7 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)

Query: 217 IPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQH 263
           +P   ++I+TMRASG GGQ+VN   +AVR+TH  +GI V    E+ QH
Sbjct: 1   MPSNSVKIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQH 48


>gi|311067223|ref|YP_003972146.1| putative ABC protein involved in RecA-independent precise excision
           of transposons [Bacillus atrophaeus 1942]
 gi|310867740|gb|ADP31215.1| putative ABC protein involved in RecA-independent precise excision
           of transposons [Bacillus atrophaeus 1942]
          Length = 629

 Score = 36.7 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/66 (12%), Positives = 19/66 (28%), Gaps = 7/66 (10%)

Query: 6   HKQICDLKNRFAEIELRMS-ESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
             +I  L+ +  ++E  ++           L  E A            +       +L  
Sbjct: 569 EDKIAKLEEKHEQLEAEIAGAGSDFGKIQDLMAEQA------KTAEELEAAMDRWTELSL 622

Query: 65  VIGDHN 70
           +I +  
Sbjct: 623 MIEELE 628


>gi|254443205|ref|ZP_05056681.1| ABC transporter, ATP-binding protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198257513|gb|EDY81821.1| ABC transporter, ATP-binding protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 644

 Score = 36.7 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 10/63 (15%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I DL+++ +E E +M++        K              ++ YD  K + +  + +  D
Sbjct: 586 IADLESQQSEYEKQMADPDFYKDPKKSQ----------EVLTTYDDNKAKIEAAYELWSD 635

Query: 69  HNS 71
            + 
Sbjct: 636 LSD 638


>gi|84995674|ref|XP_952559.1| DNA repair protein rad50 [Theileria annulata strain Ankara]
 gi|65302720|emb|CAI74827.1| DNA repair protein rad50, putative [Theileria annulata]
          Length = 1139

 Score = 36.7 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 5/183 (2%)

Query: 9    ICDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            + + K+RF ++EL MS     +    Y K+T E +++S  I+ ++        E++   +
Sbjct: 846  LQESKSRFEKLELEMSGKDVKEIKADYDKITNECSSLSHKIATMNGM--LISREENAAKL 903

Query: 66   IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
                +SDS  R  +Q     IE +   +                 +  LE       S  
Sbjct: 904  SEMLSSDSFSRAQSQYMETYIELKSHIVAKMDLEKYYKYLESSLHNYHLEKINNINSSLK 963

Query: 126  ALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRV 185
             ++       +  Y    +  ++ L    N       + + +      + +   S  +RV
Sbjct: 964  RIWREVYTGTHIDYIQSEEINMDFLDILVNTRFICCLVQSKVDKDVSPTEISSHSYSYRV 1023

Query: 186  QRV 188
              V
Sbjct: 1024 VMV 1026


>gi|319400634|gb|EFV88859.1| femAB family protein [Staphylococcus epidermidis FRI909]
          Length = 416

 Score = 36.7 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
            ++E +++E   + +  +  +    ++ I +KI   ++ K +  +L        S+ E  
Sbjct: 244 QDLEAQLAEKEKLQSKKQDKKTLNKLNDIENKIKKTNELKSDLTEL------EKSEPEGI 297

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
            L+   ++    +   L    +        +      +   A   G+    F G 
Sbjct: 298 YLSGALLMFAGNKSYYLYGASSNDYRDFLPNHHMQFEMMKYAREHGATTYDFGGT 352


>gi|242243936|ref|ZP_04798379.1| peptidoglycan pentaglycine interpeptide biosynthesis protein FmhB
           [Staphylococcus epidermidis W23144]
 gi|242232569|gb|EES34881.1| peptidoglycan pentaglycine interpeptide biosynthesis protein FmhB
           [Staphylococcus epidermidis W23144]
          Length = 416

 Score = 36.7 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIR 76
            ++E +++E   + +  +  +    ++ I +KI   ++ K +  +L        S+ E  
Sbjct: 244 QDLEAQLAEKEKLQSKKQDKKTLNKLNDIENKIKKTNELKSDLTEL------EKSEPEGI 297

Query: 77  DLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGD 131
            L+   ++    +   L    +        +      +   A   G+    F G 
Sbjct: 298 YLSGALLMFAGNKSYYLYGASSNDYRDFLPNHHMQFEMMKYAREHGATTYDFGGT 352


>gi|149194939|ref|ZP_01872032.1| seryl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134860|gb|EDM23343.1| seryl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 415

 Score = 36.7 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 8  QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
          +I +LK +   +   + +        K  E    +S I  +IS  + K +E +D
Sbjct: 44 KIEELKAKRNTLSKEIGK-NIKTNPQKAEELKKEVSNIKEEISNLENKLKEIED 96


>gi|147679214|ref|YP_001213429.1| hypothetical protein PTH_2879 [Pelotomaculum thermopropionicum SI]
 gi|146275311|dbj|BAF61060.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 238

 Score = 36.7 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 5/135 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            D+  R  +I   ++    V    +L ++ A    I  +    + K  E   ++  +   
Sbjct: 71  ADIAKRKEQI---LASPEEVQKRQELEKKLAEYEEIKEQYKWANAKYDEL--INENMEKI 125

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
             ++      Q   + ++    +L   I   ++        +   E +          + 
Sbjct: 126 RKETLELRKQQGRFIPLDFSDEKLNKGIPQDIINAHELTVNTAQNERKIRGELDNQQKWA 185

Query: 130 GDLFRMYERYAALRK 144
            D  R      A RK
Sbjct: 186 EDTARSEFMCWAWRK 200


>gi|18313677|ref|NP_560344.1| purine NTPase [Pyrobaculum aerophilum str. IM2]
 gi|18161228|gb|AAL64526.1| purine NTPase, probable [Pyrobaculum aerophilum str. IM2]
          Length = 702

 Score = 36.7 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 8   QICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPI-ISKISIYDQKKQEEQDLHTV 65
           +   L+ R AE+E ++ E +   + Y++    Y  +    +S     +  +++ ++L   
Sbjct: 198 KTESLRQRLAELEKKLGELAGVKEKYLEAERRYLKLKEQYVSLAKEREGLEKKFEELAQA 257

Query: 66  IGDHNSD 72
             +   D
Sbjct: 258 AIEAERD 264


>gi|300113831|ref|YP_003760406.1| ABC transporter-like protein [Nitrosococcus watsonii C-113]
 gi|299539768|gb|ADJ28085.1| ABC transporter related protein [Nitrosococcus watsonii C-113]
          Length = 598

 Score = 36.7 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 24/58 (41%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            K+I   +      + R+ +   +    +LT  YA +    +K+    Q+ +E + L 
Sbjct: 540 EKKISKAEQALETFQERLHDPEIMSDSERLTALYAQLQESRNKVDQLYQRWEELESLR 597


>gi|139439002|ref|ZP_01772462.1| Hypothetical protein COLAER_01468 [Collinsella aerofaciens ATCC
           25986]
 gi|133775713|gb|EBA39533.1| Hypothetical protein COLAER_01468 [Collinsella aerofaciens ATCC
           25986]
          Length = 638

 Score = 36.7 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 79/311 (25%), Gaps = 33/311 (10%)

Query: 23  MSESPSV----DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDL 78
           +++        + +           P +     Y    QE+  +  ++ +  +   +   
Sbjct: 333 LADGSVWSLTTNDF-----------PTVDPADPYTLTPQEQHIIDKLVSEFVTADHLHRH 381

Query: 79  AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYER 138
                           N + +  +P + D   S +  +     G +   F   + R   R
Sbjct: 382 IDFLYSHGSMYKVANGNLLFHGCVPLNEDGTFSSMNCLGTWHAGRDYLDFCDHIARRAWR 441

Query: 139 YAALR--KWKVE-VLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVPAT---- 191
                   W     +  +    G               + ++       + + P+     
Sbjct: 442 VGDRDALDWMWYLWIGFNSPASGRLVRTFERAYIADKSTWVEPMDPYFTLTKSPSVCDDI 501

Query: 192 --EASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
             E        + T  ++     +      + IR +       GG             + 
Sbjct: 502 MREFGVAPMACSPTGHIINGHTPVKTTKGEQPIRAEGKLLVIDGGFCRAYHPKTGIAGYT 561

Query: 250 PTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTY 309
                     KS       A  + R    + E  R      A+R+  +   D   +IR+ 
Sbjct: 562 LISSSRGCRLKSHRAFTTVAEALTRNVDIESETNRFDQ---ADRRRMVSDTDTGAKIRS- 617

Query: 310 NFSQGRITDHR 320
                +I D R
Sbjct: 618 -----QIQDLR 623


>gi|193734231|gb|ACF19884.1| ABC transporter [Kingella kingae]
          Length = 636

 Score = 36.7 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   A++  ++S+      Y K     + +  I    + K+  ++  +
Sbjct: 576 DEIAALEAEQADLSAQLSDPEIFKDYEKAGSLQSRVEEIEMLLLEKLERWEILE 629


>gi|15226314|ref|NP_180367.1| CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding
           [Arabidopsis thaliana]
 gi|2506276|sp|P21238|RUBA_ARATH RecName: Full=RuBisCO large subunit-binding protein subunit alpha,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           alpha; AltName: Full=CPN-60 alpha; Flags: Precursor
 gi|1223910|gb|AAA92061.1| chaperonin-60 alpha subunit [Arabidopsis thaliana]
 gi|4510416|gb|AAD21502.1| putative rubisco subunit binding-protein alpha subunit [Arabidopsis
           thaliana]
 gi|27311671|gb|AAO00801.1| putative rubisco subunit binding-protein alpha subunit [Arabidopsis
           thaliana]
 gi|31711734|gb|AAP68223.1| At2g28000 [Arabidopsis thaliana]
 gi|330252974|gb|AEC08068.1| chaperonin-60alpha [Arabidopsis thaliana]
          Length = 586

 Score = 36.7 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  + E+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 384 DELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 443

Query: 70  NS 71
            +
Sbjct: 444 KN 445


>gi|312866722|ref|ZP_07726936.1| ABC transporter, ATP-binding protein [Streptococcus parasanguinis
           F0405]
 gi|311097803|gb|EFQ56033.1| ABC transporter, ATP-binding protein [Streptococcus parasanguinis
           F0405]
          Length = 622

 Score = 36.7 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYDQKKQEEQD 61
            I  ++NR AEIE+ M+E+     + KL+     +      ++ K   Y+    E  +
Sbjct: 568 DIEAIENRIAEIEVEMNENG--SDFGKLSALQKELDQENERLLEKYDRYE-YLSELDE 622


>gi|24372474|ref|NP_716516.1| ABC transporter, ATP-binding protein [Shewanella oneidensis MR-1]
 gi|24346463|gb|AAN53961.1|AE015533_12 ABC transporter, ATP-binding protein [Shewanella oneidensis MR-1]
          Length = 637

 Score = 36.7 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 8/64 (12%)

Query: 10  CDLKNRFAEIELRMSESP--SVDAYIKLTEEYAAISPIISKISI----YDQKKQEEQ--D 61
             L  R AE+E  +++      D   KLT   +  + +   +      + + ++E    +
Sbjct: 572 QKLSERLAELEHLLADGELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDTME 631

Query: 62  LHTV 65
           L  +
Sbjct: 632 LELM 635


>gi|315641324|ref|ZP_07896400.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Enterococcus italicus DSM 15952]
 gi|315482897|gb|EFU73417.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Enterococcus italicus DSM 15952]
          Length = 645

 Score = 36.7 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 29/68 (42%), Gaps = 11/68 (16%)

Query: 8   QICDLKNRFAEIE-------LRMSESPSVDAYIKLTEEYAAISPIISK----ISIYDQKK 56
           ++  ++N+ A++E        +M++   +D +++L +    +          +  ++Q+ 
Sbjct: 578 KVEQIENQLAKLEDDIANYQTQMADPDILDDHVQLQKLNQQLEEAQEAQMTLLEEWEQES 637

Query: 57  QEEQDLHT 64
              + L  
Sbjct: 638 LILESLEE 645


>gi|332797961|ref|YP_004459461.1| homologous recombination repair protein Rad50 [Acidianus hospitalis
           W1]
 gi|332695696|gb|AEE95163.1| Rad50, homologous recombination repair enzyme [Acidianus hospitalis
           W1]
          Length = 863

 Score = 36.7 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAA-ISPIISKISIYDQKKQEEQD 61
             Q+  L+    E E  +++  S++   K  EE       I    + Y+  K    D
Sbjct: 302 KDQLNTLEKEIEEYEQNLAKKNSLEDDAKRYEELKERKEKIEEAYNEYNSLKSLLND 358


>gi|321456872|gb|EFX67970.1| hypothetical protein DAPPUDRAFT_301731 [Daphnia pulex]
          Length = 449

 Score = 36.7 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/117 (8%), Positives = 39/117 (33%), Gaps = 2/117 (1%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEY--AAISPIISKISIYDQKKQEEQDLHTV 65
           ++  +K +  +++  M     +    +L+++   +        +  + +++++  D+ T 
Sbjct: 293 KLKQIKEQIRDLKREMKNPSEISQDQELSKKRKISDSEEDNEILKDFHEQQKKYADIKTT 352

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
                +D E   L  ++    +             +   + D   +  L+       
Sbjct: 353 RRGKGTDREAETLNFLKKFQSKLSQTRTTKGGVDDIDDVNDDAWLNHTLKFEDKNPS 409


>gi|118572275|sp|Q09YG9|CTTB2_SAIBB RecName: Full=Cortactin-binding protein 2; Short=CortBP2
 gi|114573528|gb|ABI75311.1| cortactin-binding protein 2 [Saimiri boliviensis boliviensis]
          Length = 1659

 Score = 36.7 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 39/103 (37%), Gaps = 15/103 (14%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYI-------------KLTEEYAAISPIISKIS 50
           +   Q+  L+    ++  R+ E    +  +             K+ EE   +  +++K+ 
Sbjct: 141 MEKLQLQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDVMAKLE 200

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIREL 93
              +K  E ++   +  +    +E+    + ++   + E  +L
Sbjct: 201 EEKKKTNELEE--ELSAEKQRSTEMEAQMEKQLSEFDTEREQL 241


>gi|226493235|ref|NP_001148093.1| LOC100281701 [Zea mays]
 gi|195615742|gb|ACG29701.1| ruBisCO large subunit-binding protein subunit alpha [Zea mays]
          Length = 584

 Score = 36.7 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            D++ R A+++  +S++ S     KL E  A +S  ++ + +    + E +D    I D 
Sbjct: 385 DDIQARIAQLKRELSQTDSTYDSEKLAERIAKLSGGVAVVKVGASTEAELEDRKLRIEDA 444

Query: 70  NS 71
            +
Sbjct: 445 KN 446


>gi|18860017|ref|NP_572902.1| Ndc80 [Drosophila melanogaster]
 gi|7292901|gb|AAF48292.1| Ndc80 [Drosophila melanogaster]
 gi|16769462|gb|AAL28950.1| LD33040p [Drosophila melanogaster]
          Length = 675

 Score = 36.7 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 48/113 (42%), Gaps = 11/113 (9%)

Query: 9   ICDLKNRFAEIELRMSES---PSVDAYIKLTEEYAAI--------SPIISKISIYDQKKQ 57
           I DLK +  ++E ++ +      ++   +LT+E+  +          +I K+ +Y+Q   
Sbjct: 308 IGDLKTKLQQLENKLHDPSEDNKLNKLERLTKEHDQLAQQLAASEEELIKKLKLYEQLSA 367

Query: 58  EEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
           + ++  + +       +  + A        ++++EL+ + + +       + +
Sbjct: 368 QVEEKQSNLRQQMKYEKRLEQAVNRQKFSAQQLKELQMKCDDMENYSKAYERQ 420


>gi|327274859|ref|XP_003222193.1| PREDICTED: hypothetical protein LOC100566687 [Anolis carolinensis]
          Length = 2523

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 15/198 (7%)

Query: 6   HKQICDLKNRFA----EIELRMSES--PSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
             Q+  ++  FA    E+E++  +    +V  +  L          +       +   E+
Sbjct: 6   EDQMKRIEALFADQTRELEMKFDQKIRDTVSKFESL--IMQEKQQTMEMFETLKKDTSEQ 63

Query: 60  QDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             L T+  +     + +D  Q E      EI +    I       +         E    
Sbjct: 64  --LQTLCQEQKDYIKQQDKLQREKEIKLSEIEKQLIYIKDAQRRNNFILKNWPESERNER 121

Query: 120 TGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179
            G         ++ +  +R   ++ W    +  +    GG  + +       V    K E
Sbjct: 122 NG-----NLAEEILKWLQRVTPMQNWTEMDIQRAHRLPGGRSKAMPRDIIVKVTHYKKKE 176

Query: 180 SGVHRVQRVPATEASGRV 197
             +  +++ P    SG V
Sbjct: 177 QLMAILRKEPERLRSGGV 194


>gi|298674540|ref|YP_003726290.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
 gi|298287528|gb|ADI73494.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
          Length = 880

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 43/119 (36%), Gaps = 12/119 (10%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI-----------ISKISIYDQKK 56
           +I  L+     ++   ++  S +    L +E + I                 IS     K
Sbjct: 420 KITQLEIEREALKKE-TDPASKERLESLEKELSNIREQSKTLREQWQKEKEIISELRSFK 478

Query: 57  QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           ++ +D  T +    +D++    ++++   +    R+ E +   L   +D    +  + E
Sbjct: 479 EQIEDTKTQLERAENDNDFELASRLKYGTLIPLQRQYEEKEEELHQMQDEMLLREEVDE 537


>gi|20162544|ref|NP_619716.1| polyprotein [Maize chlorotic dwarf virus]
 gi|2160664|gb|AAB58882.1| polyprotein [Maize chlorotic dwarf virus]
          Length = 3443

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/140 (9%), Positives = 46/140 (32%), Gaps = 3/140 (2%)

Query: 7   KQICDLKNRFAEIEL---RMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            +I  ++++  E+E        S   +A  +L +    I  I   +   + + ++ +D  
Sbjct: 603 DRIRPIESKLKELEKIKPDAGGSKDSEAMRQLVQAIKDIKLIKQAMMELNDRIKDLEDSK 662

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGS 123
               D   D +     +      +  ++    E        + + +++   E +     +
Sbjct: 663 QHQEDSKPDDDTAGEQKPIPKINKIRVKAKRVEKQSGTNIVNNEIEQAFQDEEKRTVDPN 722

Query: 124 EAALFVGDLFRMYERYAALR 143
            + ++         +  + +
Sbjct: 723 ISDMYNAIKSEYLVKSFSWK 742


>gi|269123013|ref|YP_003305590.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314339|gb|ACZ00713.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2092

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 6/53 (11%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 9    ICDLKNRFAEIELRM-SESPSVDAYI-KLTEEYAAISPIISKISIYDQKKQEE 59
            +  +  +  E   ++ +++  ++     L++E   +   IS I      + + 
Sbjct: 1930 LDGINKKLEEQNNKLIAQNNKLNEKRGDLSKELKELKDKISVIEKIKMNEDDL 1982


>gi|237733586|ref|ZP_04564067.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229383419|gb|EEO33510.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 584

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 53/153 (34%), Gaps = 15/153 (9%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD---- 61
             +I  L  R  E+   ++   +++ Y+ LT++ AA+   +++I  Y +  +  +D    
Sbjct: 335 DDKINVLGQRMDELLDFLNSHGALEEYVALTKQLAALQNELNRIHEYQRILKTYKDTVLD 394

Query: 62  --LHTVIGDHN-----SDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
              + +I D        D                +    +     ++     ++     L
Sbjct: 395 IKANLIIQDKETQTYLDDEAEYLSELKNKYWTFAKRFYPKKRSGLVIKNNSGENTLRYTL 454

Query: 115 EIRAGTGGSEA----ALFVGDLFRMYERYAALR 143
           E R     S+      +F  D   +  R + +R
Sbjct: 455 EARIEDDSSDGVNEVRMFCFDFLLLICRKSKIR 487


>gi|217077939|ref|YP_002335657.1| 3D domain family [Thermosipho africanus TCF52B]
 gi|217037794|gb|ACJ76316.1| 3D domain family [Thermosipho africanus TCF52B]
          Length = 531

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQ--KKQEEQDLHT 64
           ++I DL+ R  ++  ++    S+ +   L  E A I  I S+++   Q  K ++ +D+  
Sbjct: 201 EKIQDLEERLNDLSFKV---DSISSKENLERELATIKQISSELNFLKQEFKMEDIEDILK 257

Query: 65  V 65
           +
Sbjct: 258 L 258


>gi|161506963|ref|YP_001576917.1| ABC transporter, ATP-binding protein [Lactobacillus helveticus DPC
           4571]
 gi|160347952|gb|ABX26626.1| ABC transporter, ATP-binding protein [Lactobacillus helveticus DPC
           4571]
          Length = 637

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            ++I +L+ +   I+  MS       + KL        P+  ++S   ++  +  +    
Sbjct: 576 EQKIEELEEQEQNIQNEMSNPDIASNFDKLG-------PLQEQLSDVQKQLDDANNAWEK 628

Query: 66  IGDHNSDSE 74
             +   + E
Sbjct: 629 AIEEMDNFE 637


>gi|260102465|ref|ZP_05752702.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus helveticus DSM 20075]
 gi|260083733|gb|EEW67853.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus helveticus DSM 20075]
 gi|323465918|gb|ADX69605.1| ABC transporter ATPase component [Lactobacillus helveticus H10]
 gi|328462806|gb|EGF34673.1| ABC transporter, ATP-binding protein [Lactobacillus helveticus MTCC
           5463]
          Length = 637

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            ++I +L+ +   I+  MS       + KL        P+  ++S   ++  +  +    
Sbjct: 576 EQKIEELEEQEQNIQNEMSNPDIASNFDKLG-------PLQEQLSDVQKQLDDANNAWEK 628

Query: 66  IGDHNSDSE 74
             +   + E
Sbjct: 629 AIEEMDNFE 637


>gi|300362270|ref|ZP_07058446.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus gasseri JV-V03]
 gi|300353261|gb|EFJ69133.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus gasseri JV-V03]
          Length = 643

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I  L+    EI+  M+      ++ KL      +S +       DQ   + ++    + 
Sbjct: 584 KIEKLEAEEKEIQTEMANPDIAASFEKLGPLQEKLSAVQ---KQLDQANNDWENALDALD 640

Query: 68  DHN 70
           +  
Sbjct: 641 EFE 643


>gi|21554572|gb|AAM63618.1| putative rubisco subunit binding-protein alpha subunit [Arabidopsis
           thaliana]
          Length = 586

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  + E+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 384 DELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 443

Query: 70  NS 71
            +
Sbjct: 444 KN 445


>gi|1888527|gb|AAC51144.1| ATP-binding cassette transporter [Homo sapiens]
          Length = 2273

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 48/188 (25%), Gaps = 31/188 (16%)

Query: 182  VHRVQRVPATEASGRVHTSAATVA-------VLPEAAEIDVDIPLEDIRIDTMRASGSGG 234
             H+        + G     +  +A       V+ +     VD        D +    SG 
Sbjct: 1052 HHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGR 1111

Query: 235  QHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294
              +  T       H    I + +  +         +K        +   R      + RK
Sbjct: 1112 TIIMPTHHMDEADHQGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVRKMKNIQSQRK 1171

Query: 295  LQIGSGDRSERIRTYNFSQGRITDHRINLTLY--------KLEYVLQGYIDDIINPLLTA 346
               G+   S +                  +            E VL G ++++++ +L  
Sbjct: 1172 GSEGTCSCSSK----------------GFSTTCPAHVDDLTPEQVLDGDVNELMDVVLHH 1215

Query: 347  HQAKMIGS 354
                 +  
Sbjct: 1216 VPEAKLVE 1223


>gi|116629073|ref|YP_814245.1| ABC transporter ATPase [Lactobacillus gasseri ATCC 33323]
 gi|311111137|ref|ZP_07712534.1| ABC transporter, ATP-binding protein [Lactobacillus gasseri MV-22]
 gi|116094655|gb|ABJ59807.1| ATPase component of ABC transporter with duplicated ATPase domain
           [Lactobacillus gasseri ATCC 33323]
 gi|311066291|gb|EFQ46631.1| ABC transporter, ATP-binding protein [Lactobacillus gasseri MV-22]
          Length = 643

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I  L+    EI+  M+      ++ KL      +S +       DQ   + ++    + 
Sbjct: 584 KIEKLEAEEKEIQTEMANPDIAASFEKLGPLQEKLSAVQ---KQLDQANNDWENALDALD 640

Query: 68  DHN 70
           +  
Sbjct: 641 EFE 643


>gi|324991234|gb|EGC23168.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis SK353]
          Length = 622

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
            I  L+ R +EIE  M E+     + +L++    +      ++ K   Y+
Sbjct: 568 DIEALEERISEIEAAMQENS--SDFARLSQLQQELDEQNEKLLEKYERYE 615


>gi|217963778|ref|YP_002349456.1| ABC transporter ATP-binding protein [Listeria monocytogenes HCC23]
 gi|217333048|gb|ACK38842.1| ABC transporter, ATP-binding protein [Listeria monocytogenes HCC23]
 gi|307571649|emb|CAR84828.1| ABC transporter, ATP-binding protein [Listeria monocytogenes L99]
          Length = 650

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 6/68 (8%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 6   HKQICDLK-------NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIY-DQKKQ 57
            +++ +++        + AE+E +++       + K  E    +  + +      ++ + 
Sbjct: 583 KRKLEEVEKSMEATDEKIAELEHQLTNPEVFQDHEKALEITQELDAVKATGEKLMEEWET 642

Query: 58  EEQDLHTV 65
             ++L ++
Sbjct: 643 LSEELESM 650


>gi|242021327|ref|XP_002431096.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative
           [Pediculus humanus corporis]
 gi|212516345|gb|EEB18358.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative
           [Pediculus humanus corporis]
          Length = 726

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 9   ICDLKNRFAEIELRMSE-----SPSVDAYIKLTEEY-AAISPIISKISIYDQKKQEEQDL 62
           I  +  + AEIE ++ +         + + K+++E      P +          +E+Q+L
Sbjct: 432 IEKVAKKLAEIEAQLQDKSRTFQKLKEDFNKISKEIEVKRGPTMDAFIELTNMFKEQQEL 491

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEI 116
                      EI+    +    +++ I+ LE     L             LE 
Sbjct: 492 QERFKKEAQPHEIK-SLMVNSELLKQRIKSLEESRELLKENLKQQVAYYKTLER 544


>gi|28375557|emb|CAD66602.1| SMC protein [Pyrococcus furiosus]
          Length = 1177

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 53/120 (44%), Gaps = 5/120 (4%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
           +    +++  +++R   +E R++E        K + E   I  +++KI+       E + 
Sbjct: 794 ISSLKEELSRIESRIESLESRLNEELL---PRKASLE-EEIEGLVNKINALKNNISENEK 849

Query: 62  LHTVI-GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
              ++  +      I +  + E+  + ++ ++LE +I+ L   K+    K   LEI A T
Sbjct: 850 ALELLNKELEKLKSIEENIKGEIRTLREKRKKLEEDISKLREKKEVLQRKLQELEIEANT 909


>gi|323359759|ref|YP_004226155.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Microbacterium testaceum StLB037]
 gi|323276130|dbj|BAJ76275.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Microbacterium testaceum StLB037]
          Length = 559

 Score = 36.3 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M++  +   +  L  E   +   I     +D    + +     +  
Sbjct: 95  IKPKLDRFNEISALMADPDA--DFDALLAEMGTLQEEIDAADGWD-LDSQLEQAMDALRT 151

Query: 69  HNSDSE 74
             +D+ 
Sbjct: 152 PPADAS 157


>gi|304387661|ref|ZP_07369847.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Neisseria meningitidis ATCC 13091]
 gi|304338326|gb|EFM04450.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Neisseria meningitidis ATCC 13091]
          Length = 636

 Score = 36.3 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 575 DEIAALETEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLE 628


>gi|114321247|ref|YP_742930.1| putative ABC transporter ATP-binding protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227641|gb|ABI57440.1| ABC transporter related protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 555

 Score = 36.3 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
           I  L  RF EI  + +E  +   +  L  E A +   I     ++ +++ EQ    +
Sbjct: 97  IKALLTRFDEISAKFAEPDA--DFEALMAEQAKLQDRIDATGAWELERKLEQAADAL 151


>gi|297588756|ref|ZP_06947399.1| V-type two sector ATPase, V(0) subunit I [Finegoldia magna ATCC
           53516]
 gi|297574129|gb|EFH92850.1| V-type two sector ATPase, V(0) subunit I [Finegoldia magna ATCC
           53516]
          Length = 646

 Score = 36.3 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 5/107 (4%)

Query: 6   HKQICDLKN-----RFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           H +I +LK      R  E+  +  +    D Y +L+     ++ +       +QKK E  
Sbjct: 78  HNKIDELKQGKKTFRLDELTKKALDFDFDDHYKELSSLDKQLTELDQNNQTLNQKKSELT 137

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTD 107
               +  D +   +   +  +     +K I +L+     +      +
Sbjct: 138 PWENLDLDISKIDDFERVKVVTGTVSDKFIDQLKLNTKDIEDIYIEE 184


>gi|290892220|ref|ZP_06555216.1| ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|290558343|gb|EFD91861.1| ABC transporter [Listeria monocytogenes FSL J2-071]
          Length = 650

 Score = 36.3 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 6/68 (8%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 6   HKQICDLK-------NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIY-DQKKQ 57
            +++ +++        + AE+E +++       + K  E    +  + +      ++ + 
Sbjct: 583 KRKLEEVEKSMEATDEKIAELEHQLTNPEVFQDHEKALEITQELDAVKATGEKLMEEWET 642

Query: 58  EEQDLHTV 65
             ++L ++
Sbjct: 643 LSEELESM 650


>gi|224102555|ref|XP_002312723.1| predicted protein [Populus trichocarpa]
 gi|222852543|gb|EEE90090.1| predicted protein [Populus trichocarpa]
          Length = 762

 Score = 36.3 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 3   FLSHKQ----ICDLKNRFAEIELRMSESPSVDA------YIKLTEEYAAISPIISKISIY 52
           ++   +    I  L  R  E++ ++ E              +L ++ A +  +  +    
Sbjct: 429 WVPRDKKDEMIMKLIPRAQELQNQLQEWTEWANQKVMQAARRLGKDKAELKSLRQEKEEV 488

Query: 53  DQKKQEEQDLHT 64
           ++ K+E+Q L  
Sbjct: 489 ERLKKEKQTLEE 500


>gi|62321579|dbj|BAD95121.1| putative rubisco subunit binding-protein alpha subunit [Arabidopsis
           thaliana]
          Length = 333

 Score = 36.3 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            +L+ R A+++  + E+ SV    KL E  A +S  ++ I +    + E +D    I D 
Sbjct: 131 DELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDA 190

Query: 70  NS 71
            +
Sbjct: 191 KN 192


>gi|327462286|gb|EGF08613.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis SK1]
          Length = 622

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
            I  L+ R +EIE  M E+     + +L++    +      ++ K   Y+
Sbjct: 568 DIEALEERISEIEAAMQENG--SDFTRLSQLQQELDEQNEKLLEKYERYE 615


>gi|313240147|emb|CBY32498.1| unnamed protein product [Oikopleura dioica]
          Length = 262

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 5/69 (7%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           Q+  L+ + A++  ++S+   V  Y K  +E A +  +  +I    +  QE + L  +  
Sbjct: 199 QLQVLEEKRAQLRAQLSDRNWVTDYDK--KE-AKLKELNKEIRELKKINQEVERL--IAS 253

Query: 68  DHNSDSEIR 76
           + +SD   +
Sbjct: 254 ESSSDKSFK 262


>gi|301621379|ref|XP_002940023.1| PREDICTED: tripartite motif-containing protein 65-like [Xenopus
           (Silurana) tropicalis]
          Length = 537

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 39/156 (25%), Gaps = 21/156 (13%)

Query: 157 DGGYKEIVATISGRGVFSRMKFE-----SGVHRVQRVPATEASGRVHTSAATVAVLPEAA 211
             G+      I+        K                P T  +  +     TV  L +  
Sbjct: 31  ACGHNFCQKCINDHWDQEVRKQIPYSCPRCRKIFPERPETPKNVDLSDLVETVRALEKQN 90

Query: 212 EIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQNRLRAMK 271
                       +                 +  +  H     +   +EK    ++   M 
Sbjct: 91  VSQEPEIQRKRNV--------------CPATKCQ-RHNRNFELFCCTEKRCVCSKCY-MV 134

Query: 272 VLRARLYDVERKRMANERSANRKLQIGSGDRSERIR 307
             R    +   ++   E    RK  +G+ ++ E IR
Sbjct: 135 ECRNHTLESIEEKRQMEEEQLRKSLLGNANQKEEIR 170


>gi|297626001|ref|YP_003687764.1| ABC transporter ATP-binding protein [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921766|emb|CBL56324.1| ABC transporter ATP-binding protein [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 562

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYD---QKKQEEQDLH 63
            +  + NRF EI   M+   +   Y  L  E   +   +   + +D   Q +Q    L 
Sbjct: 95  DLKGMLNRFNEISAEMANPDA--DYDALLPEMGELQEQLDARNAWDIDSQLQQAMDALQ 151


>gi|270284405|ref|ZP_05966049.2| ABC transporter, ATP-binding protein [Bifidobacterium gallicum DSM
           20093]
 gi|270276801|gb|EFA22655.1| ABC transporter, ATP-binding protein [Bifidobacterium gallicum DSM
           20093]
          Length = 551

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I     RF EI   M+   +   +  L EE   +   I     +D    + +     +  
Sbjct: 89  IAAKVARFNEIGEEMANPDA--DFDSLMEEMGKLQTEIDAADGWD-LDSQLEQAMDALQC 145

Query: 69  HNSDS 73
            + D+
Sbjct: 146 PDPDT 150


>gi|256086969|ref|XP_002579654.1| myosin heavy chain [Schistosoma mansoni]
 gi|238665122|emb|CAZ35893.1| myosin heavy chain [Schistosoma mansoni]
          Length = 1493

 Score = 36.3 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 11  DLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHN 70
           D++ R  E+E R+++    D    LTE    +S      +  ++ K++ +DL + +    
Sbjct: 793 DMEQRIKELEERLADEE--DQAANLTEVKKKMS------AEIEELKKDVEDLESSLQKAE 844

Query: 71  SDSEIRDLAQIEVLAIEKEIREL 93
            + + +D     + +   +  E+
Sbjct: 845 QEKQTKDNQIRTLQSEMAQQDEM 867


>gi|169600149|ref|XP_001793497.1| hypothetical protein SNOG_02904 [Phaeosphaeria nodorum SN15]
 gi|160705390|gb|EAT89635.2| hypothetical protein SNOG_02904 [Phaeosphaeria nodorum SN15]
          Length = 1008

 Score = 36.3 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 4/157 (2%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVD--AYIKLTEEYAAISPIISKIS-IYDQKKQEEQD 61
           S ++   L+  F E++  ++ S       Y  L  E+ A+   + +I      K    Q 
Sbjct: 436 SQEKAQSLQEEFDEVQEELASSQRQSEHKYNTLQAEHKALKESVEEIQIDLQSKVDALQT 495

Query: 62  LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL-EIRAGT 120
               +G    +    +   + + AI  +   LE     L    +       +  E  A  
Sbjct: 496 TQKKLGQKEEEVGQLEAEVLRLKAITGDAETLEVIKRELSDQVNHIKKLETLTREQNAEL 555

Query: 121 GGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDD 157
                     ++    +R    +   ++ +    N+ 
Sbjct: 556 KQYRKQHKAIEIVEEEKRSLQTKLHNMDDMQRQLNEA 592


>gi|322421144|ref|YP_004200367.1| ABC transporter-like protein [Geobacter sp. M18]
 gi|320127531|gb|ADW15091.1| ABC transporter related protein [Geobacter sp. M18]
          Length = 648

 Score = 36.3 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 19/54 (35%), Gaps = 4/54 (7%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAIS-PIISKISIYDQK 55
             +I   +   A++E +M+               E +A ++  I +    ++  
Sbjct: 595 EDKIGTKEGELAKLEEKMAAPEFFADHEAARAAGERHAQLTAEIAALYEAWESI 648


>gi|37675393|gb|AAQ97205.1| chimeric kinesin [synthetic construct]
          Length = 428

 Score = 36.3 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++   LK +  ++E+ ++    V+   K   ++E   +  +++       KK EE+DL 
Sbjct: 356 KEKNARLKGKVEKLEIELAR-EFVNDPSKHISSKEMVRLKKLVAYWKEQAGKKGEEEDLV 414

Query: 64  TVIGD 68
            +  D
Sbjct: 415 DIEED 419


>gi|308485009|ref|XP_003104704.1| hypothetical protein CRE_23493 [Caenorhabditis remanei]
 gi|308257904|gb|EFP01857.1| hypothetical protein CRE_23493 [Caenorhabditis remanei]
          Length = 586

 Score = 36.3 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 7/69 (10%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEY-AAISPIISKISIYDQKKQEEQDLHTVIG 67
           I  + + F  +E +         Y +L++E+ + +   I  I    Q + E   LH ++ 
Sbjct: 58  IDLIVSTFQTLEAKE------KDYEELSKEHDSEMDENIELIRENMQLQDEINFLHELLA 111

Query: 68  DHNSDSEIR 76
           +   + +++
Sbjct: 112 EKRKEDDMK 120


>gi|301301193|ref|ZP_07207349.1| ATP-dependent chaperone protein ClpB [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851192|gb|EFK78920.1| ATP-dependent chaperone protein ClpB [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 863

 Score = 36.3 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 8/113 (7%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K R  E++  +S     + + K  +           I     KK E       + +  ++
Sbjct: 440 KKRLEELQAELS-----NLHEKANKLRQRWEDEKLDIQKVSDKKSELDKARHQLEEAENN 494

Query: 73  SEIRDL---AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++          +  +EKE+++LEN         +       I E+ +   G
Sbjct: 495 YDLEKAAKLQHATIPQLEKELQQLENSERPKEWMVEESVTDKEIAEVISRMTG 547


>gi|302875735|ref|YP_003844368.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
 gi|307689166|ref|ZP_07631612.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
 gi|302578592|gb|ADL52604.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
          Length = 866

 Score = 36.3 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS----PIISKISIYDQKKQ 57
           + +  ++I  L+     +    S+S ++  Y  L +E + +      + +K      K  
Sbjct: 417 LDILKRKIFQLEIEMEALSKE-SDSSAIQRYEALKKEVSELKEQDLELSAKYEKEKHKIL 475

Query: 58  EEQDLHTVIGDHNSDSEIRD 77
             ++L + I D   + E  +
Sbjct: 476 SVKELKSEIDDIKGEIERAE 495


>gi|189515813|ref|XP_700704.3| PREDICTED: serine/threonine-protein kinase N2 [Danio rerio]
 gi|122891175|emb|CAM14346.1| novel protein similar to vertebrate protein kinase N2 (PKN2)
          [Danio rerio]
          Length = 970

 Score = 36.3 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 6  HKQICDLKNRFA-EIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE-QDLH 63
           +++ ++K +   EI   +     V+   K+T E   ++ + + +   ++K +E  Q+L 
Sbjct: 29 QQKLDEIKEQIKREIRKELKIKEGVENLRKVTTEKKRLAYVDNMLKKSNKKLEELHQELQ 88

Query: 64 TV 65
           +
Sbjct: 89 EL 90


>gi|113953637|ref|YP_731101.1| ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB
           [Synechococcus sp. CC9311]
 gi|113880988|gb|ABI45946.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
           [Synechococcus sp. CC9311]
          Length = 863

 Score = 36.3 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 7   KQICDLKNRFAEIE-LRMS-----ESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEE 59
           ++I ++  +  ++E  ++S     ++ S +   +L  E A +S   S ++  + Q+K   
Sbjct: 411 EEIDEIDRKILQLEMEKLSLGRESDAASQERLQRLERELAELSEQQSTLNAQWQQEKGAI 470

Query: 60  QDLHTVIGDHN 70
            +L  +  +  
Sbjct: 471 DELSALKEEIE 481


>gi|196230546|ref|ZP_03129408.1| Class I peptide chain release factor [Chthoniobacter flavus
           Ellin428]
 gi|196225476|gb|EDY19984.1| Class I peptide chain release factor [Chthoniobacter flavus
           Ellin428]
          Length = 132

 Score = 36.3 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 221 DIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYD 279
           D      R+SG GGQHVN   +AV + H+P+G  VT    +SQ  NR  A   L   + +
Sbjct: 24  DFEEKFSRSSGPGGQHVNKVSTAVMLRHVPSGAAVTVQDTRSQSMNRQLAWTRLLDAIEE 83

Query: 280 VERKRMANERSANRKL 295
             R   A  RS   K 
Sbjct: 84  QRRAERAARRSEIEKK 99


>gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R]
          Length = 268

 Score = 36.3 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
               +  ++  ED+    +R SG GGQ +N T++ V++ H PTG+ V     +S  QNR 
Sbjct: 154 HKQRVVPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRK 213

Query: 268 RAMKVLRARL 277
            A ++L  +L
Sbjct: 214 LARRILLGKL 223


>gi|228476899|ref|ZP_04061544.1| ABC transporter ATP binding protein [Streptococcus salivarius
           SK126]
 gi|228251473|gb|EEK10618.1| ABC transporter ATP binding protein [Streptococcus salivarius
           SK126]
          Length = 639

 Score = 36.3 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKI-SIYDQKKQEEQ 60
           +  ++ R  EI   M E+  V     L +E   +S     +   +    ++ +
Sbjct: 586 LETIEERLEEISAAMLETNDVAELSDLQKELDDLSVSQEALMEEWSDLSEQLE 638


>gi|154685218|ref|YP_001420379.1| YfmR [Bacillus amyloliquefaciens FZB42]
 gi|154351069|gb|ABS73148.1| YfmR [Bacillus amyloliquefaciens FZB42]
          Length = 629

 Score = 36.3 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 7/67 (10%)

Query: 6   HKQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
             +I  L+ +   +E  ++E         +L  E A            +   +   +L  
Sbjct: 569 EDKIAGLEEKHQRLEAEIAEAGSDFGKIQELMAEQA------KTAEELEAAMERWTELSL 622

Query: 65  VIGDHNS 71
           +I +  +
Sbjct: 623 MIEELEN 629


>gi|154486842|ref|ZP_02028249.1| hypothetical protein BIFADO_00674 [Bifidobacterium adolescentis
           L2-32]
 gi|154084705|gb|EDN83750.1| hypothetical protein BIFADO_00674 [Bifidobacterium adolescentis
           L2-32]
          Length = 558

 Score = 36.3 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I +   RF +I   M+   +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IAEKVARFNQIGEEMANPDA--DFDALMEEMGKLQNDIDAANGWD-LDSQLEQAMDALQC 152

Query: 69  HNSDS 73
            + D+
Sbjct: 153 PDPDT 157


>gi|148377701|ref|YP_001256577.1| ABC transporter ATP-binding protein [Mycoplasma agalactiae PG2]
 gi|148291747|emb|CAL59136.1| P115 Like (Mycoplasma hyorhinis) ABCtransporter ATP Binding Protein
           [Mycoplasma agalactiae PG2]
          Length = 995

 Score = 36.3 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 2/113 (1%)

Query: 10  CDLKNRFAEIELRMSES-PSVDAYIKLTEEYA-AISPIISKISIYDQKKQEEQDLHTVIG 67
            DL +R   +E ++S++           +E +  +  +  +++        E +   +I 
Sbjct: 257 NDLNDRIKNLEAKISQNIEFKTNLEAAQKEISIELEAVKDRLNNLSIAIARENERERLIV 316

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           +     +  +        IEK  + +        L      D S IL+     
Sbjct: 317 EGELKVDTTEQINAYKTLIEKSAQRVAYYNREYDLINKRISDNSEILDAHDKE 369


>gi|310797985|gb|EFQ32878.1| hypothetical protein GLRG_08022 [Glomerella graminicola M1.001]
          Length = 596

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 44/138 (31%), Gaps = 9/138 (6%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEY-AAISPIISKISIYDQKKQEEQDL 62
            S  Q+   K+++A +E  ++E      + + ++E    +   I +    ++K QE+ + 
Sbjct: 14  SSEDQLRWYKSQYASLEEELAE------FRESSKELEQELEKDIEQAEKRERKLQEKAES 67

Query: 63  HTVIGDHNSDSEIRDLAQIEVLAIEKEIR--ELENEINYLLLPKDTDDDKSCILEIRAGT 120
                +       +            E     L +    L +     +  +   E +A  
Sbjct: 68  LKFEAEEWKSKYNQAKKDANAAQNALEKEITMLRDTNRTLQMKLRDIEVVNDDFERQARN 127

Query: 121 GGSEAALFVGDLFRMYER 138
             S        L    ER
Sbjct: 128 TSSSLEDLESKLNSSIER 145


>gi|302024126|ref|ZP_07249337.1| peptide chain release factor 2 [Streptococcus suis 05HAS68]
          Length = 50

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 15/45 (33%)

Query: 23 MSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
          M+E    +  +   +    ++ + +    + Q      +   ++ 
Sbjct: 1  MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLD 45


>gi|269102659|ref|ZP_06155356.1| putative ABC transporter ATP-binding protein [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162557|gb|EEZ41053.1| putative ABC transporter ATP-binding protein [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 642

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I  L+N  AE++ ++++          T+  A ++ +  K   ++   +  ++L  +  
Sbjct: 583 KIEQLENDIAELQEKINDPGFFADVKNDTQ--AVLTLLAEKEQAFEVAFERWEELEAMQK 640

Query: 68  D 68
           +
Sbjct: 641 E 641


>gi|227888737|ref|ZP_04006542.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227850764|gb|EEJ60850.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 641

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I  L+N   EI+  M+      ++ KL      +S +  +    DQ   + ++    + 
Sbjct: 582 RIEKLENEEQEIQTEMANPDIAASFEKLGPLQEKLSAVQEQ---LDQANTDWENALEALD 638

Query: 68  DHN 70
           +  
Sbjct: 639 EFE 641


>gi|45440047|ref|NP_991586.1| putative ABC transporter ATP-binding protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51598006|ref|YP_072197.1| ABC transporter ATP-binding protein [Yersinia pseudotuberculosis IP
           32953]
 gi|145597433|ref|YP_001161508.1| putative ABC transporter ATP-binding protein [Yersinia pestis
           Pestoides F]
 gi|153949739|ref|YP_001402880.1| ABC transporter ATP-binding protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162421609|ref|YP_001608008.1| putative ABC transporter ATP-binding protein [Yersinia pestis
           Angola]
 gi|186897202|ref|YP_001874314.1| putative ABC transporter ATP-binding protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|229836329|ref|ZP_04456496.1| Glutathione-regulated potassium-efflux systemATP-binding protein
           [Yersinia pestis Pestoides A]
 gi|45434902|gb|AAS60463.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Yersinia pestis biovar Microtus str. 91001]
 gi|51591288|emb|CAH22954.1| putative ABC transporter with fused ATP-binding domains [Yersinia
           pseudotuberculosis IP 32953]
 gi|145209129|gb|ABP38536.1| ATPase [Yersinia pestis Pestoides F]
 gi|152961234|gb|ABS48695.1| ABC transporter, ATP-binding protein [Yersinia pseudotuberculosis
           IP 31758]
 gi|162354424|gb|ABX88372.1| ABC transporter, ATP-binding protein [Yersinia pestis Angola]
 gi|186700228|gb|ACC90857.1| ABC transporter related [Yersinia pseudotuberculosis PB1/+]
 gi|229706397|gb|EEO92404.1| Glutathione-regulated potassium-efflux systemATP-binding protein
           [Yersinia pestis Pestoides A]
          Length = 640

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEE 59
           +    KQ+  L    A IE ++++S   D   K  LT+     + + SK+   + +  + 
Sbjct: 565 IMTLEKQMDKLSTELAAIEAQLADSALYDIARKADLTQCLLQQTQVKSKLEETEMQWLDV 624

Query: 60  QDLHTVIGDHNSDSE 74
           Q+   ++    SD++
Sbjct: 625 QEQLEILTKEFSDAD 639


>gi|323340147|ref|ZP_08080411.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus ruminis ATCC 25644]
 gi|323092338|gb|EFZ34946.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus ruminis ATCC 25644]
          Length = 650

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI-ISKISIYDQKKQEEQDLHTVIG 67
           +  L  +  ++E +MS   + +   K+ E  A +  I        +  +Q   +L   + 
Sbjct: 591 VEKLDAQKNDLENQMSSPENYNDLEKMGELQAKLQEISKKLAEAEENWEQASMELEEFLA 650


>gi|269795762|ref|YP_003315217.1| ABC transporter ATPase [Sanguibacter keddieii DSM 10542]
 gi|269097947|gb|ACZ22383.1| ATPase component of ABC transporters with duplicated ATPase domain
           [Sanguibacter keddieii DSM 10542]
          Length = 560

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF EI   M+E  +   +  L  E   +   +     +D    + +     +  
Sbjct: 96  IKGKLDRFNEISALMAEPDA--DFDTLLAEMGELQEALDHADAWD-LDAQLEQAMDALRC 152

Query: 69  HNSDSEIR 76
              D++++
Sbjct: 153 PPPDADVK 160


>gi|163754567|ref|ZP_02161689.1| hypothetical protein KAOT1_16768 [Kordia algicida OT-1]
 gi|161325508|gb|EDP96835.1| hypothetical protein KAOT1_16768 [Kordia algicida OT-1]
          Length = 1141

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI----------YDQK 55
            K++ +L     E+  +  +  + +   +L +++  +   + ++             ++K
Sbjct: 656 QKELQELAKEQEELSKKSGDQNTKEQQEELNKKFEDLQKQMDELDKENEELRKPLDLERK 715

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
           K EE+D+     +   D E  + +Q E    E++    + +       +      +  ++
Sbjct: 716 KDEEEDIKQEQQEATDDLEKSEESQSEQQKSEQQKSAKQKQKKAAQKMQRMSKSMATAMQ 775

Query: 116 IRAGT 120
           +    
Sbjct: 776 MSGQQ 780


>gi|123470155|ref|XP_001318285.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
 gi|121901040|gb|EAY06062.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3]
          Length = 2416

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 44/115 (38%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
              +I +L++  +E++  + ++ +     K+ +    I  + S I   +++K    +    
Sbjct: 951  ENRIHELESEISELKKELDQNNNQQNDEKIEKLQKEIEDLKSVIDEENEQKVSNTEAENR 1010

Query: 66   IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            I +  S+         +    + + +  + +     L  + +  K+   E++   
Sbjct: 1011 IHELESEISELKKELDQNNNQQNDEKIEKLQKEIEDLKNELESSKAENEELQNEF 1065


>gi|322786948|gb|EFZ13172.1| hypothetical protein SINV_00047 [Solenopsis invicta]
          Length = 837

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 8/64 (12%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAIS-PIISKISIYDQKKQEEQDLHTVIG 67
           + DL+NR AE   +       D   K  +E + +   + SK   +++ K++++DL  ++ 
Sbjct: 746 VADLENRLAEYTQQH------DEKNKENKE-SELEYQLKSKTEEFEKLKKDQEDLLELLT 798

Query: 68  DHNS 71
           D +S
Sbjct: 799 DQDS 802


>gi|227495354|ref|ZP_03925670.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Actinomyces coleocanis DSM 15436]
 gi|226831224|gb|EEH63607.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Actinomyces coleocanis DSM 15436]
          Length = 553

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +     R+ EI   M +  +   +  L EE   +   I   + +D    + +     + 
Sbjct: 88  DLVAKLKRYNEISELMCDPDA--DFDALMEEMGKLQDEIEAENGWD-LDSQLEQAMDALR 144

Query: 68  DHNSDSEIR 76
               D++++
Sbjct: 145 CPPPDADVK 153


>gi|224543683|ref|ZP_03684222.1| hypothetical protein CATMIT_02893 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523336|gb|EEF92441.1| hypothetical protein CATMIT_02893 [Catenibacterium mitsuokai DSM
           15897]
          Length = 623

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 22/56 (39%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
              I D + + +  E  +     ++ Y K  E  A +  + +++     + +E  +
Sbjct: 564 ENDISDFEEKISAKEEELHSDEVMNDYQKYNEITAELEDLNNQLEELMTEWEELSE 619


>gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36]
 gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36]
          Length = 171

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
               G GGQ +N ++S V++THIPTG++V   + +SQ QNR  A + L  +L D  
Sbjct: 46  HGGRGPGGQKINKSNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDDYY 101


>gi|170022525|ref|YP_001719030.1| putative ABC transporter ATP-binding protein [Yersinia
           pseudotuberculosis YPIII]
 gi|169749059|gb|ACA66577.1| ABC transporter related [Yersinia pseudotuberculosis YPIII]
          Length = 640

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 2   VFLSHKQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEE 59
           +    KQ+  L    A IE ++++S   D   K  LT+     + + SK+   + +  + 
Sbjct: 565 IMTLEKQMDKLSTELAAIEAQLADSALYDIARKADLTQCLLQQTQVKSKLEETEMQWLDV 624

Query: 60  QDLHTVIGDHNSDSE 74
           Q+   ++    SD++
Sbjct: 625 QEQLEILTKEFSDAD 639


>gi|90021270|ref|YP_527097.1| hypothetical protein Sde_1623 [Saccharophagus degradans 2-40]
 gi|89950870|gb|ABD80885.1| ABC transporter related [Saccharophagus degradans 2-40]
          Length = 636

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 6   HKQICDLKNRFAEIELRMSESPSV----DAYIKLTEEYAAI-SPIISKISIYDQKKQEEQ 60
            KQ+  L+ + A++E  +++        D    L ++   + S +      +  K  E +
Sbjct: 570 EKQMETLQEKLAKLEEELADPELYQTGGDKLKTLLKQQGELRSQLAETEEEWFIKSDELE 629

Query: 61  DLHT 64
            L+ 
Sbjct: 630 ALNA 633


>gi|71020659|ref|XP_760560.1| hypothetical protein UM04413.1 [Ustilago maydis 521]
 gi|46100448|gb|EAK85681.1| hypothetical protein UM04413.1 [Ustilago maydis 521]
          Length = 1371

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 10   CDLKNRFAEIELRMSESPSVDA----YIKLTEEYAAISPIISKISIYDQKKQEE 59
             +L+ +  E E    +   ++A      KLT+E   +   + ++    ++ +E 
Sbjct: 1200 AELEKKLQEFEKLTLDKQELEARVGSLDKLTKEKQELEKKVKQLEKLSKQNKEL 1253


>gi|329666821|gb|AEB92769.1| ABC transporter ATPase component [Lactobacillus johnsonii DPC 6026]
          Length = 641

 Score = 36.3 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I  L+N   EI+  M+      ++ KL      +S +  +    DQ   + ++    + 
Sbjct: 582 RIEKLENEEQEIQTEMANPDIAASFEKLGPLQEKLSAVQEQ---LDQANTDWENALEALD 638

Query: 68  DHN 70
           +  
Sbjct: 639 EFE 641


>gi|156552109|ref|XP_001605206.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
           vitripennis]
          Length = 159

 Score = 36.3 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
                    I  +D+ I  +R SG GGQ  N T + V + H+PTG+++     +SQ QN 
Sbjct: 36  RIDTSKVPKINEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPTGLVIKCHETRSQTQNL 95

Query: 267 LRAMKVLRARLYDVERKRMANERSANR 293
             A + L  +L  +     A E    +
Sbjct: 96  KIAKEKLINKLDLLYNGEDAVENQKKK 122


>gi|332971588|gb|EGK10538.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Kingella kingae ATCC 23330]
          Length = 637

 Score = 36.3 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   A++  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 576 DEIAALEAEQADLNAQLSDPEIFKDYEKAGSLQSRAEEIEMLLLEKLERWEILE 629


>gi|115384276|ref|XP_001208685.1| hypothetical protein ATEG_01320 [Aspergillus terreus NIH2624]
 gi|114196377|gb|EAU38077.1| hypothetical protein ATEG_01320 [Aspergillus terreus NIH2624]
          Length = 1341

 Score = 36.3 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 7/131 (5%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKIS----IYDQKKQEEQ- 60
            K++ + ++R  EIE   +E  S+     L  E A                  K +E Q 
Sbjct: 347 RKKLKEYESRAEEIERLQAEHESLMEMATLDREMAE--ETADAFKHECEALRMKVEELQL 404

Query: 61  DLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
           ++  +  ++   S +    +       +  +  E     L+  +D    +   L+ +   
Sbjct: 405 EVEVLRDENEELSHVMSPEEKSSQGWLQMEKTNERLREALIRLRDMTQQQENELKDQIKE 464

Query: 121 GGSEAALFVGD 131
              +   +   
Sbjct: 465 LQQDLEDYAAI 475


>gi|281485061|gb|ADA70347.1| putative peptide chain release factor 2 [Campylobacter jejuni]
          Length = 34

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 317 TDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAK 350
            D+R      +++ +L G I  +I  +L A +A+
Sbjct: 1   KDNRSGEAFSQVDNILDGDIKKMIEGVLIALKAE 34


>gi|297734721|emb|CBI16955.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 219 LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
           ++   + T ++SG GGQH N  +SAVR+ H+PTGI+     ++SQH+NR
Sbjct: 61  MKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNR 109


>gi|225459890|ref|XP_002263666.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 507

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 219 LEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNR 266
           ++   + T ++SG GGQH N  +SAVR+ H+PTGI+     ++SQH+NR
Sbjct: 61  MKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNR 109


>gi|119962537|ref|YP_948127.1| ABC transporter ATP-binding protein [Arthrobacter aurescens TC1]
 gi|119949396|gb|ABM08307.1| putative ABC transporter, ATP-binding protein [Arthrobacter
           aurescens TC1]
          Length = 560

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 12  LKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNS 71
              RF EI   M+   +   Y  L +E   +   I     +D    + +     +    +
Sbjct: 99  KIQRFNEISEEMANPDA--DYETLLDEMGKLQEAIDAADAWD-IDSQLEQAMDALRCPPA 155

Query: 72  DSE 74
           DS+
Sbjct: 156 DSD 158


>gi|241758790|ref|ZP_04756903.1| ABC transporter ATP-binding protein uup [Neisseria flavescens
           SK114]
 gi|241320998|gb|EER57211.1| ABC transporter ATP-binding protein uup [Neisseria flavescens
           SK114]
          Length = 635

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPI----ISKISIYDQKK 56
            +I  L+   AEI  ++S+      Y K     +    I    + K+  ++  +
Sbjct: 574 DEIAALETEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMSLLEKLERWEWLE 627


>gi|56205922|emb|CAI24424.1| myosin XVIIIa [Mus musculus]
          Length = 1998

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 6/86 (6%), Positives = 26/86 (30%), Gaps = 1/86 (1%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEY-AAISPIISKISIYDQKKQEEQDLHT 64
             +++  L+++   +E  M +   V        E    +    +++   +      ++   
Sbjct: 1753 QEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFEKTQVKRLENLASRLKETME 1812

Query: 65   VIGDHNSDSEIRDLAQIEVLAIEKEI 90
             + +        +  + E     +  
Sbjct: 1813 KLTEERDQRAAAENREKEQNKRLQRQ 1838


>gi|328910709|gb|AEB62305.1| putative ABC transporter (ATP-binding protein) YfmR [Bacillus
           amyloliquefaciens LL3]
          Length = 629

 Score = 36.3 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 7/67 (10%)

Query: 6   HKQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
             +I  L+ +   +E  ++E         +L  E A            +   +   +L  
Sbjct: 569 EDKIAGLEEKHQRLEAEIAEAGSDFGKIQELMAEQA------KTAEELEAAMERWTELSL 622

Query: 65  VIGDHNS 71
           +I +  +
Sbjct: 623 MIEELEN 629


>gi|148727317|ref|NP_001092009.1| cortactin binding protein 2 [Gallus gallus]
 gi|117380068|gb|ABK34433.1| cortactin-binding protein 2 [Gallus gallus]
          Length = 1630

 Score = 36.3 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLT-------------EEYAAISPIISKIS 50
           +   Q+ +L+    ++  R+ E    + +I L              EE   +  ++SK  
Sbjct: 137 IEKSQLQNLELEHKKLSARLEEERGKNKHIVLMLVKECKQLSGRIVEEAQKLEEVMSKFE 196

Query: 51  IYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
              +K  E ++  ++  +    +++    + ++   + E  +L  +++          ++
Sbjct: 197 EEKKKASELEE--SLAAEKQKSTQMEAQMEKQLSEFDTEREQLRAKLHREEAHTSDLREE 254

Query: 111 SCILEIRAGT 120
              +      
Sbjct: 255 RDKMIKMIEQ 264


>gi|290977967|ref|XP_002671708.1| hypothetical protein NAEGRDRAFT_81454 [Naegleria gruberi]
 gi|284085279|gb|EFC38964.1| hypothetical protein NAEGRDRAFT_81454 [Naegleria gruberi]
          Length = 1176

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 1   MVFL---SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQ 57
           M  +   + K+I  ++++  EIE    +        KL    + ++  +  I   + + +
Sbjct: 348 MQMVQSKADKEIKAVEDKIKEIEKENEDHEKQKESEKLKSTSSELTASLISIKNLESEVE 407

Query: 58  EEQDLHTVIG 67
           E++D  T + 
Sbjct: 408 EKEDKITELE 417


>gi|16804112|ref|NP_465597.1| hypothetical protein lmo2073 [Listeria monocytogenes EGD-e]
 gi|224501129|ref|ZP_03669436.1| hypothetical protein LmonFR_01170 [Listeria monocytogenes FSL
           R2-561]
 gi|254827039|ref|ZP_05231726.1| ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|16411543|emb|CAD00151.1| lmo2073 [Listeria monocytogenes EGD-e]
 gi|258599421|gb|EEW12746.1| ABC transporter [Listeria monocytogenes FSL N3-165]
          Length = 650

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 6   HKQICDLK-------NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIY-DQKKQ 57
            +++ +++        + AE+EL+++       + K  E    +  + +      ++ +Q
Sbjct: 583 KRKLEEIEKSMEETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEWEQ 642

Query: 58  EEQDLHTV 65
             ++L ++
Sbjct: 643 ISEELESI 650


>gi|319441708|ref|ZP_07990864.1| hypothetical protein CvarD4_08067 [Corynebacterium variabile DSM
           44702]
          Length = 1116

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + +++ R   +   M++ P  D   +L          +       + ++E +++  +IGD
Sbjct: 899 LREIRERIEPVNRIMADLPFYDDDHRLQITLRENQSEVR-----RRFRKELREVRALIGD 953

Query: 69  HNSDSEIRDLAQIE 82
            ++D E  ++    
Sbjct: 954 ASTDEERAEVYPRM 967


>gi|297243777|ref|ZP_06927707.1| ATPase component of ABC transporter with duplicated ATPase domain
           [Gardnerella vaginalis AMD]
 gi|296888198|gb|EFH26940.1| ATPase component of ABC transporter with duplicated ATPase domain
           [Gardnerella vaginalis AMD]
          Length = 551

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I     RF +I   M+   +   +  L EE   +   I   + +D    + +     +  
Sbjct: 89  IAQKVARFNQIGEEMANPDA--DFDALMEEMGKLQTEIDAANGWD-LDSQLEQAMDALQC 145

Query: 69  HNSDS 73
            + DS
Sbjct: 146 PDQDS 150


>gi|284802519|ref|YP_003414384.1| hypothetical protein LM5578_2275 [Listeria monocytogenes 08-5578]
 gi|284995661|ref|YP_003417429.1| hypothetical protein LM5923_2226 [Listeria monocytogenes 08-5923]
 gi|284058081|gb|ADB69022.1| hypothetical protein LM5578_2275 [Listeria monocytogenes 08-5578]
 gi|284061128|gb|ADB72067.1| hypothetical protein LM5923_2226 [Listeria monocytogenes 08-5923]
          Length = 650

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 6   HKQICDLK-------NRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIY-DQKKQ 57
            +++ +++        + AE+EL+++       + K  E    +  + +      ++ +Q
Sbjct: 583 KRKLEEIEKSMEETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEWEQ 642

Query: 58  EEQDLHTV 65
             ++L ++
Sbjct: 643 ISEELESI 650


>gi|322419681|ref|YP_004198904.1| Class I peptide chain release factor [Geobacter sp. M18]
 gi|320126068|gb|ADW13628.1| Class I peptide chain release factor [Geobacter sp. M18]
          Length = 106

 Score = 35.9 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)

Query: 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLR 274
           +I   DI+++  RASG GGQH NTTDSAVRI H+PTGI+   S  +SQ QNR +A++ L 
Sbjct: 3   EIKESDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQAQNREKALERLA 62

Query: 275 ARL 277
             L
Sbjct: 63  EML 65


>gi|157693047|ref|YP_001487509.1| molecular chaperone DnaK [Bacillus pumilus SAFR-032]
 gi|167016927|sp|A8FFD2|DNAK_BACP2 RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName:
           Full=Heat shock 70 kDa protein; AltName: Full=Heat shock
           protein 70
 gi|157681805|gb|ABV62949.1| chaperone DnaK [Bacillus pumilus SAFR-032]
          Length = 613

 Score = 35.9 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           +VF + K + DL+ +  E   ++ ++      +K   E   +  I +K        QE 
Sbjct: 512 LVFTTEKTLKDLEGKIDE--EQVKKANDAKDALKAAIEKGELEDIKAKKDELQTIVQEL 568


>gi|270014225|gb|EFA10673.1| muscle-specific protein 300 [Tribolium castaneum]
          Length = 15417

 Score = 35.9 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 44/127 (34%), Gaps = 11/127 (8%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYI---------KLTEEYAA--ISPIISKISIYDQ 54
             +++  + +++AE+E  +    S              K TEE     +  ++S       
Sbjct: 3110 QEKLQSIHSKYAEVEKLIQNLDSWLKQKEGQAKDQSLKSTEETKRGHLDKLLSLEKEVLG 3169

Query: 55   KKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCIL 114
            K+++  ++  +  +   D ++  L              +    +++   +  +++ +  L
Sbjct: 3170 KEKDFGEVAELAKNLEGDVKVSQLLTRYQALKNLLKEAISRYRSFVNEHQSFNEEYATFL 3229

Query: 115  EIRAGTG 121
                  G
Sbjct: 3230 HWLTEKG 3236


>gi|255548876|ref|XP_002515494.1| conserved hypothetical protein [Ricinus communis]
 gi|223545438|gb|EEF46943.1| conserved hypothetical protein [Ricinus communis]
          Length = 710

 Score = 35.9 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 47/112 (41%), Gaps = 9/112 (8%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKIS-IYDQKKQEEQDLH 63
           + KQ+ +L  ++ E+E +     S      L +E+  +    + +     Q  +E+ ++ 
Sbjct: 517 TKKQLQNLSKQYEELEAK-----SKADIKFLAKEFKTLKSSQAVLKEELSQSVREKYEVE 571

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILE 115
            ++ +     E+R   +     +  + R L N +    L   ++++   I+E
Sbjct: 572 KLLQEE---REMRMHEKNARKKLLYDCRTLCNRLKECNLNLSSEEEDEFIVE 620


>gi|219886233|gb|ACL53491.1| unknown [Zea mays]
          Length = 474

 Score = 35.9 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 30/62 (48%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            D++ R A+++  +S++ S     KL E  A +S  ++ + +    + E +D    I D 
Sbjct: 275 DDIQARIAQLKRELSQTDSTYDSEKLAERIAKLSGGVAVVKVGASTEAELEDRKLRIEDA 334

Query: 70  NS 71
            +
Sbjct: 335 KN 336


>gi|309389297|gb|ADO77177.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM
           2228]
          Length = 868

 Score = 35.9 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 56/196 (28%), Gaps = 10/196 (5%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
             ++ R   +E        +D Y  L +  A ++ I     I  +   +  +   ++   
Sbjct: 319 KAIEQRHTALE------EIIDNYQVLDKLRAELNEIYDLERIMSKITYQSANARDLVALK 372

Query: 70  NSDSEIRDLAQIEVLAIEK-EIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
           NS +++  +  +         I           +    +             GG  A+ +
Sbjct: 373 NSLAKLPAVENLMQNLKSDLIIEMQTKFDLLEDMHDLIEKAIKSEPPTTITEGGIIASDY 432

Query: 129 VGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRV 188
              L ++ +  ++ + W  ++        G        +    VF      +  H  +  
Sbjct: 433 NSSLDQLRDLVSSGKDWITKLQKEEREKTG---INTLKVGFNKVFGYYLEVTNSHTDKVP 489

Query: 189 PATEASGRVHTSAATV 204
              E    +  S   +
Sbjct: 490 ERYERKQTLSNSERYI 505


>gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R]
 gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R]
          Length = 275

 Score = 35.9 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
               +  ++  ED+    +R SG GGQ +N T++ V++ H PTG+ V     +S  QNR 
Sbjct: 159 HKQRVVPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRK 218

Query: 268 RAMKVLRARL 277
            A ++L  +L
Sbjct: 219 LARRILLGKL 228


>gi|126650990|ref|ZP_01723201.1| DNA helicase [Bacillus sp. B14905]
 gi|126592191|gb|EAZ86240.1| DNA helicase [Bacillus sp. B14905]
          Length = 1260

 Score = 35.9 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 41/114 (35%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTV 65
            KQ+  ++    ++E  +++ PS++      +E +     +     Y +  +++Q L   
Sbjct: 494 EKQLAQIEPIIQQLEQTLADHPSIENLQLTIQETSQKVEQLEAAVQYKELLEQKQQLTVQ 553

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAG 119
             D     E  +   I +   +K +  L +        +      S +L  +  
Sbjct: 554 FQDIQEKYETENNRLIIMKEAQKYVHTLTSYERIQRYLQHYQIRPSHVLSQQMN 607


>gi|123390967|ref|XP_001299982.1| inversin protein alternative isoform [Trichomonas vaginalis G3]
 gi|121880941|gb|EAX87052.1| inversin protein alternative isoform, putative [Trichomonas
           vaginalis G3]
          Length = 1469

 Score = 35.9 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 2/108 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD--LHT 64
           ++I  L+    EI  + S++       +L +     + +  K++  +    +  +  L  
Sbjct: 116 EKIQKLQTELNEIPKQKSDNEIQSLQSQLNQINEESNKLKEKLNEMESNTNQADETILSK 175

Query: 65  VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSC 112
           +     SD        ++ L+ +   + +       L  K T      
Sbjct: 176 IKELKESDDFESIYNFLDELSSQGNRKMISKACEEGLWKKTTTVHFRD 223


>gi|91080025|ref|XP_972114.1| PREDICTED: similar to Ofd1 protein, putative [Tribolium castaneum]
 gi|270003227|gb|EEZ99674.1| hypothetical protein TcasGA2_TC002431 [Tribolium castaneum]
          Length = 634

 Score = 35.9 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEY-AAISPIISKISIYDQK---- 55
           M+ +   Q+ +++ +  EIE  ++          L  EY   +  I +    Y+++    
Sbjct: 155 MLMIREAQLKEMREKIKEIEASLAGKELKVLSQDLKAEYEKQLQNIRNLRIFYEERQRAD 214

Query: 56  KQEEQDLHTVIGDHNSDSEIRDLAQ 80
           K++++++  ++ +   D +      
Sbjct: 215 KKQKEEMKKLLEEVKIDLQDEKNKN 239


>gi|326796211|ref|YP_004314031.1| ATP-dependent chaperone ClpB [Marinomonas mediterranea MMB-1]
 gi|326546975|gb|ADZ92195.1| ATP-dependent chaperone ClpB [Marinomonas mediterranea MMB-1]
          Length = 861

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 9/99 (9%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K R  E+E  +          +L +EY+ +  I +      Q  Q+ ++    +     +
Sbjct: 438 KQRLKELESEIE---------RLQKEYSDLEEIWNAEKAQVQGAQKLKEELEQVKQEMEE 488

Query: 73  SEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKS 111
           +  +             I  LE EI    L ++ + +  
Sbjct: 489 ARRQGNLAKMSELQYGVIPMLEAEIEKATLAEEGEQETQ 527


>gi|291411528|ref|XP_002722041.1| PREDICTED: myosin XVIIIB-like [Oryctolagus cuniculus]
          Length = 2524

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 8/106 (7%), Positives = 33/106 (31%), Gaps = 13/106 (12%)

Query: 10   CDLKNRFAEIELRMSESPS------------VDAYIKLTEEYAAISPIISKI-SIYDQKK 56
              L+++ A++   +++                   ++ + E   +     ++     + +
Sbjct: 1389 DVLESKIADLTTELADERFKGDVACQVLESEWAERLQASRELQELKSKYEQVQKKLGEVE 1448

Query: 57   QEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
            ++ ++    I   + +      A    + ++    E E     L  
Sbjct: 1449 KQLEEAQQKIQLSDLERNRPGGADEWQMRLDCAQMENEFLRKRLQQ 1494


>gi|255321418|ref|ZP_05362578.1| ABC transporter ATP-binding protein uup [Campylobacter showae
           RM3277]
 gi|255301571|gb|EET80828.1| ABC transporter ATP-binding protein uup [Campylobacter showae
           RM3277]
          Length = 646

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
           ++I  L+ +  EI   +S+       I LT  Y  +  + S++   + +  E  ++   +
Sbjct: 585 EKIAALEAKIKEINAGLSDPKIY-QQIGLTALYNDLEAVKSELETLENEYFEVLEIAENL 643

Query: 67  G 67
            
Sbjct: 644 E 644


>gi|325831247|ref|ZP_08164539.1| ATP-binding cassette protein, ChvD family [Eggerthella sp. HGA1]
 gi|325486848|gb|EGC89295.1| ATP-binding cassette protein, ChvD family [Eggerthella sp. HGA1]
          Length = 559

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 3/64 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +    +RF +I   M+E  +   +  L  E   +   I   + +D    +       +  
Sbjct: 96  VKAKIDRFNKIGEEMAEPDA--DFDALMAEMGELQDAIDAANGWD-LDSQLSQAMDALQC 152

Query: 69  HNSD 72
            + D
Sbjct: 153 PDPD 156


>gi|296284204|ref|ZP_06862202.1| putative ABC transporter ATP-binding protein [Citromicrobium
           bathyomarinum JL354]
          Length = 557

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
            D+  RF +I + M E  +   +  L+EE A +   I  +  +     + +     +   
Sbjct: 100 ADMVERFNQIGIEMGEEDA--DFDALSEEMAQLQDKIDAVDGW-TLDNQLEIAMEALRCP 156

Query: 70  NSDSEIRD 77
            SD+ + +
Sbjct: 157 PSDASVEN 164


>gi|282852780|ref|ZP_06262122.1| ABC transporter, ATP-binding protein [Lactobacillus gasseri 224-1]
 gi|282556522|gb|EFB62142.1| ABC transporter, ATP-binding protein [Lactobacillus gasseri 224-1]
          Length = 540

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I  L+    EI+  M+      ++ KL      +S +       DQ   + ++    + 
Sbjct: 481 KIEKLEAEEKEIQTEMANPDIAASFEKLGPLQEKLSAVQ---KQLDQANNDWENALDALD 537

Query: 68  DHN 70
           +  
Sbjct: 538 EFE 540


>gi|308172599|ref|YP_003919304.1| ABC transporter ATP-binding protein YfmR [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605463|emb|CBI41834.1| putative ABC transporter (ATP-binding protein) YfmR [Bacillus
           amyloliquefaciens DSM 7]
 gi|328552361|gb|AEB22853.1| ABC transporter (ATP-binding protein) YfmR [Bacillus
           amyloliquefaciens TA208]
          Length = 629

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 7/67 (10%)

Query: 6   HKQICDLKNRFAEIELRMSE-SPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
             +I  L+ +   +E  ++E         +L  E A            +   +   +L  
Sbjct: 569 EDKIAGLEEKHQRLEAEIAEAGSDFGKIQELMAEQA------KTAEELEAAMERWTELSL 622

Query: 65  VIGDHNS 71
           +I +  +
Sbjct: 623 MIEELEN 629


>gi|308234746|ref|ZP_07665483.1| putative ABC transporter ATP-binding protein [Gardnerella vaginalis
           ATCC 14018]
 gi|311114329|ref|YP_003985550.1| ABC transporter ATP-binding protein [Gardnerella vaginalis ATCC
           14019]
 gi|310945823|gb|ADP38527.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Gardnerella vaginalis ATCC 14019]
          Length = 558

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           I    +RF +I   M+   +   +  L EE   +   I   + +D    + +     +  
Sbjct: 96  IAQKVDRFNQIGEEMANPDA--DFDALMEEMGKLQTEIDAANGWD-LDSQLEQAMDALQC 152

Query: 69  HNSDS 73
            + DS
Sbjct: 153 PDPDS 157


>gi|300712756|ref|YP_003738569.1| Kinetochore-Ndc80 complex, subunit Spc25 [Halalkalicoccus jeotgali
           B3]
 gi|299126440|gb|ADJ16778.1| Kinetochore-Ndc80 complex, subunit Spc25 [Halalkalicoccus jeotgali
           B3]
          Length = 647

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKK-QEEQDLHTVIGD 68
            +L  +  ++E  +      +  +   +E   +     ++        ++ ++L   + +
Sbjct: 422 EELVEKIEDLESAVEADEDDEDLLAAQKEVTQLELKRDRLERKQNALAEDIENLEEQLAE 481

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDT 106
            +     R+    E+  +   I  +E E          
Sbjct: 482 RDQLEARREEINAELEELRTRIERIEREAIEAFNKHME 519


>gi|194017733|ref|ZP_03056343.1| chaperone protein DnaK [Bacillus pumilus ATCC 7061]
 gi|194010633|gb|EDW20205.1| chaperone protein DnaK [Bacillus pumilus ATCC 7061]
          Length = 612

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           +VF + K + DL+ +  E   ++ ++      +K   E   +  I +K        QE 
Sbjct: 512 LVFTTEKTLKDLEGKIDE--EQVKKANDAKDALKAAIEKGELEDIKAKKDELQTIVQEL 568


>gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS
           6054]
 gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 156

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVER-KR 284
               G GGQ +N ++S V++TH+PTGI+V     +SQ  NR RA ++L  +L D+   + 
Sbjct: 28  KGGRGPGGQKINKSNSKVQLTHLPTGIVVTCQYSRSQESNRKRAREILALKLDDLNNPET 87

Query: 285 MANERSANRKLQI 297
             N    +RK ++
Sbjct: 88  SRNAVVNDRKTKV 100


>gi|332534248|ref|ZP_08410093.1| hypothetical protein PH505_bd00320 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036328|gb|EGI72799.1| hypothetical protein PH505_bd00320 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 893

 Score = 35.9 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 37/125 (29%), Gaps = 11/125 (8%)

Query: 17  AEIELRMSESPSVDAYIKLTEEYAAISPI-----------ISKISIYDQKKQEEQDLHTV 65
           A++E +++++     Y    +  A +  +             +       ++   +L  +
Sbjct: 481 ADLEAQLADAKDWQKYAAAPKRKALLEEVSALVSEECTDPQQRAEQVKALRKRWNELGRL 540

Query: 66  IGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEA 125
             D      ++   QIE+L         E E+         +   + +  +       + 
Sbjct: 541 DTDEEKHQGVQFDEQIELLFAPCRSYFAEQEVQREASKAQRESIINDMHALHLQPTAEDD 600

Query: 126 ALFVG 130
             +  
Sbjct: 601 FDWKQ 605


>gi|257791194|ref|YP_003181800.1| putative ABC transporter ATP-binding protein [Eggerthella lenta DSM
           2243]
 gi|317488071|ref|ZP_07946649.1| ABC transporter [Eggerthella sp. 1_3_56FAA]
 gi|257475091|gb|ACV55411.1| ABC transporter related [Eggerthella lenta DSM 2243]
 gi|316912822|gb|EFV34353.1| ABC transporter [Eggerthella sp. 1_3_56FAA]
          Length = 559

 Score = 35.9 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 3/64 (4%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           +    +RF +I   M+E  +   +  L  E   +   I   + +D    +       +  
Sbjct: 96  VKAKIDRFNKIGEEMAEPDA--DFDALMAEMGELQDAIDAANGWD-LDSQLSQAMDALQC 152

Query: 69  HNSD 72
            + D
Sbjct: 153 PDPD 156


>gi|315221418|ref|ZP_07863339.1| segregation protein SMC [Streptococcus anginosus F0211]
 gi|315189537|gb|EFU23231.1| segregation protein SMC [Streptococcus anginosus F0211]
          Length = 1177

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 1/129 (0%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGD 68
           + + + +  ++  ++S++ S+   IK + E A ++   +++  Y+Q  ++ +DL  ++  
Sbjct: 691 LAEQEKQVEDLHTQLSQANSLLEEIKASGEEARLAEQKAQM-AYEQTHKQVEDLSELLAL 749

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALF 128
              +     L  +         R  E E        + +  KS    ++A      A L 
Sbjct: 750 QERELSREVLPDMAEQKERLVNRLAEIEQEKTETEAEIEQIKSDKDAVQARLDKLTAHLS 809

Query: 129 VGDLFRMYE 137
              L R   
Sbjct: 810 ELRLVRTEL 818


>gi|169841079|ref|ZP_02874192.1| hypothetical protein cdivTM_28268 [candidate division TM7
          single-cell isolate TM7a]
          Length = 65

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 8  QICDLKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEE 59
           I +LKN   E+E R  E+     D   ++ +  +A   ++ +    +   ++ 
Sbjct: 9  DIENLKNEINELEKRTFEADFWNTDNSQEILKNISAKKKLLEEYDKLNGLFEDV 62


>gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
 gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
          Length = 264

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
               I  ++  ED+    +R SG GGQ +N T++ V++ H PTGI V     +S  QNR 
Sbjct: 150 HTQRIVPELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLSQNRK 209

Query: 268 RAMKVLRARL 277
            A K L  +L
Sbjct: 210 IARKRLLEKL 219


>gi|148543999|ref|YP_001271369.1| ABC transporter related [Lactobacillus reuteri DSM 20016]
 gi|184153393|ref|YP_001841734.1| ABC transporter ATP-binding component [Lactobacillus reuteri JCM
           1112]
 gi|227364912|ref|ZP_03848957.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri MM2-3]
 gi|325682463|ref|ZP_08161980.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri MM4-1A]
 gi|148531033|gb|ABQ83032.1| ABC transporter related [Lactobacillus reuteri DSM 20016]
 gi|183224737|dbj|BAG25254.1| ABC transporter ATP-binding component [Lactobacillus reuteri JCM
           1112]
 gi|227070059|gb|EEI08437.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri MM2-3]
 gi|324978302|gb|EGC15252.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri MM4-1A]
          Length = 636

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI 51
            +++  L  +  ++E  M+E+     Y K+ +    ++ I  KI  
Sbjct: 579 DEELDALDQQHQQLENEMAEAA--SDYTKIAKLQKQLNEIQEKIDE 622


>gi|325124408|gb|ADY83931.1| transport protein (ABC superfamily, atp_bind) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 636

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 9   ICDLKNRFAEIELRMSESP----SVDAYIKLTEEYAAISPI-ISKISIYDQKKQ 57
           I  L+   AE+  ++++      + D   K ++  A I  + + K+  +D+ +Q
Sbjct: 578 IEKLEVEQAELSDKLADGSWFVSNADEATKASQRLAEIEEVLLEKLERWDELEQ 631


>gi|303232237|ref|ZP_07318936.1| ABC transporter, ATP-binding protein [Atopobium vaginae PB189-T1-4]
 gi|302481647|gb|EFL44708.1| ABC transporter, ATP-binding protein [Atopobium vaginae PB189-T1-4]
          Length = 699

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 29/63 (46%), Gaps = 7/63 (11%)

Query: 6   HKQICDL-------KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQE 58
            K++ ++         R AE+E ++++S   +      +  +  + ++ K+S  +++  E
Sbjct: 631 KKRLREIDAALAAGSARKAELEEKLADSDLYNDKAAFGDVMSEYNALVEKVSALEEEWLE 690

Query: 59  EQD 61
             D
Sbjct: 691 LSD 693


>gi|219682970|ref|YP_002469353.1| ABC transporter ATP-binding protein [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|219620620|gb|ACL28777.1| ATP binding protein of ABC transporter [Bifidobacterium animalis
           subsp. lactis AD011]
          Length = 570

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
            +     RF EI   M+   +   +  L EE   +   I   + +D    + +     + 
Sbjct: 95  DVAAKVARFNEIGEEMANPDA--DFDSLMEEMGKLQTEIDAANGWD-LDSQLEQAMDALQ 151

Query: 68  DHNSDS 73
             + D+
Sbjct: 152 CPDPDT 157


>gi|189462626|ref|ZP_03011411.1| hypothetical protein BACCOP_03318 [Bacteroides coprocola DSM 17136]
 gi|189430787|gb|EDU99771.1| hypothetical protein BACCOP_03318 [Bacteroides coprocola DSM 17136]
          Length = 646

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 9   ICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKI-SIYDQKKQEEQDLH 63
           I  L+   AE+E RM+         KL E++  +   IS     ++    E ++L 
Sbjct: 591 IERLEKEVAELEERMATPEGASDM-KLYEQHQQLKKQISDAEEEWENVSLELEELK 645


>gi|124009950|ref|ZP_01694615.1| ABC transporter, ATP-binding protein [Microscilla marina ATCC
           23134]
 gi|123984034|gb|EAY24412.1| ABC transporter, ATP-binding protein [Microscilla marina ATCC
           23134]
          Length = 642

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 7/63 (11%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKI----SIYDQKKQEEQDLH 63
           ++   + +  EIEL+++++   +   KL +     + +  ++      +++   +  +L 
Sbjct: 580 KVTKSEKKQEEIELKLADNTIYNDPEKLEKTQQEFAKVQEELAAANDAWEELVMKIDELE 639

Query: 64  TVI 66
             +
Sbjct: 640 AQL 642


>gi|42518549|ref|NP_964479.1| ABC transporter ATPase component [Lactobacillus johnsonii NCC 533]
 gi|41582834|gb|AAS08445.1| ABC transporter ATPase component [Lactobacillus johnsonii NCC 533]
          Length = 641

 Score = 35.9 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I  L+N   EI+  M+      ++ KL      +S +  +    +Q   + ++    + 
Sbjct: 582 RIEKLENEEQEIQTEMANPDIAASFEKLGPLQEKLSAVQEQ---LNQANTDWENALEALD 638

Query: 68  DHN 70
           +  
Sbjct: 639 EFE 641


>gi|319789740|ref|YP_004151373.1| SMC domain protein [Thermovibrio ammonificans HB-1]
 gi|317114242|gb|ADU96732.1| SMC domain protein [Thermovibrio ammonificans HB-1]
          Length = 894

 Score = 35.9 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 43/91 (47%), Gaps = 3/91 (3%)

Query: 10  CDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ-DLHTVIGD 68
             ++     +E  +      +   +L++E  A++P+  K+    +++++ +  + ++I +
Sbjct: 640 ERIREELNRLEQEL--KSFKEKERELSQELKALNPVRDKLRKLQKEEEDGERRIRSLIEE 697

Query: 69  HNSDSEIRDLAQIEVLAIEKEIRELENEINY 99
            +      +  + ++ AI +E++ LE E   
Sbjct: 698 ASKLKGEIEELRRQIGAIREELKRLEVEKQC 728


>gi|308491580|ref|XP_003107981.1| CRE-RBR-2 protein [Caenorhabditis remanei]
 gi|308249928|gb|EFO93880.1| CRE-RBR-2 protein [Caenorhabditis remanei]
          Length = 1451

 Score = 35.9 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 5/95 (5%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           Q+  L  R      +  E   +D   + T+E   +  ++ +   +D K  E ++L  ++ 
Sbjct: 862 QLEQLLQRIDAWRKKAEE--VMDREQEYTKE--DLERVVEEGEEFDIKLTEIEELRKLVE 917

Query: 68  DHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLL 102
                SE              E          L+ 
Sbjct: 918 MKE-WSERARKVTSWTPTSNMENEFDFECKKRLIR 951


>gi|218960598|ref|YP_001740373.1| valyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729255|emb|CAO80166.1| valyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 882

 Score = 35.9 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEE 59
           KQI  L    + I+ +++    ++   +  + +E      + +K+ +      E 
Sbjct: 828 KQIEKLTKELSGIKAKLANPNFLNNAKEEVVAKEKEKFIEVNTKLELLQNLLSEL 882


>gi|322700992|gb|EFY92744.1| nuclear segregation protein (Bfr1), putative [Metarhizium acridum
           CQMa 102]
          Length = 478

 Score = 35.9 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 1/117 (0%)

Query: 5   SHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPII-SKISIYDQKKQEEQDLH 63
           S KQI +L+ +  +I+  M +        +  +  A +  I   +   Y        +  
Sbjct: 176 SQKQIDELRAKIKDIKDSMEDPEQKALSDQYNKIQAELDTIKAEQDEAYKGISNLRDERS 235

Query: 64  TVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGT 120
            +  +           + E    +K  +  E E       +   + +    E     
Sbjct: 236 KLQAEQQEKYTAIRKLKDEYYGQKKAFQAFEREAREKAKARREAEREQWKKEALKKD 292


>gi|189425595|ref|YP_001952772.1| valyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421854|gb|ACD96252.1| valyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 897

 Score = 35.9 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 7   KQICDLKNRFAEIELRMSESPSVDAYIK--LTEEYAAISPIISKISIYDQKKQEEQDLH 63
           K+I  L     +   ++     VD      + +E A ++ + +K ++ ++  ++ ++L 
Sbjct: 839 KEIAKLDKEIEQFSKKLENPSFVDRAPADIVAKEKAKLADVTAKKAVLEESLEKIRNLK 897


>gi|254883053|ref|ZP_05255763.1| ABC transporter ATP-binding protein [Bacteroides sp. 4_3_47FAA]
 gi|319643572|ref|ZP_07998192.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_40A]
 gi|254835846|gb|EET16155.1| ABC transporter ATP-binding protein [Bacteroides sp. 4_3_47FAA]
 gi|317384741|gb|EFV65700.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_40A]
          Length = 647

 Score = 35.9 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 19/58 (32%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++I  L+    E+E  M+            +       +   +  ++    E +++ 
Sbjct: 588 EQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTVEEWETVSMELEEMQ 645


>gi|238853864|ref|ZP_04644228.1| ABC transporter, ATP-binding protein [Lactobacillus gasseri 202-4]
 gi|238833508|gb|EEQ25781.1| ABC transporter, ATP-binding protein [Lactobacillus gasseri 202-4]
          Length = 643

 Score = 35.9 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           +I  L+    EI+  M+      ++ KL      +S +       DQ   + ++    + 
Sbjct: 584 KIEKLEAEEKEIQTEMANPEIAASFEKLGPLQEKLSAVQ---KQLDQANNDWENALDALD 640

Query: 68  DHN 70
           +  
Sbjct: 641 EFE 643


>gi|254173858|ref|ZP_04880529.1| hypothetical Bps2 protein [Thermococcus sp. AM4]
 gi|214032107|gb|EEB72938.1| hypothetical Bps2 protein [Thermococcus sp. AM4]
          Length = 656

 Score = 35.9 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 26/83 (31%), Gaps = 8/83 (9%)

Query: 2   VFLSHKQ--ICDLKNRFAEIELR------MSESPSVDAYIKLTEEYAAISPIISKISIYD 53
             + + +  I  LK    E+  +      M  +   D   ++++    +  +  +     
Sbjct: 193 AMIPNLKKEIEQLKKEIKELTQKKNSLMAMIGTDRADKKQEISKLKRNLEKLEKEKESLK 252

Query: 54  QKKQEEQDLHTVIGDHNSDSEIR 76
           Q+ +E       I +     E  
Sbjct: 253 QEMRELTTSQERIKEEIKQKEAE 275


>gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
 gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
          Length = 713

 Score = 35.9 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 191 TEASGRVHTSAATVAVLPEA--AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH 248
           T++   +     +   + +    +  + +  +D+    +R SG GGQ +N   + V++TH
Sbjct: 572 TDSELELPEWYTSGTYMLQPGSRKYPLTLDEKDLAEKFIRGSGPGGQAINKLSTNVQLTH 631

Query: 249 IPTGI-MVTSSEKSQHQNRLRAMKVLRARL 277
           +PTG  +     +S+ +NR  A + +   L
Sbjct: 632 LPTGTKVTCQETRSRDRNRELARRRMSLTL 661


>gi|194467927|ref|ZP_03073913.1| ABC transporter related [Lactobacillus reuteri 100-23]
 gi|194452780|gb|EDX41678.1| ABC transporter related [Lactobacillus reuteri 100-23]
          Length = 636

 Score = 35.9 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI 51
            +++  L  +  ++E  M+E+     Y K+ +    ++ I  KI  
Sbjct: 579 DEELDALDQQHQQLENEMAEAA--SDYTKIAKLQKQLNEIQEKIDE 622


>gi|227543426|ref|ZP_03973475.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri CF48-3A]
 gi|300910093|ref|ZP_07127553.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri SD2112]
 gi|227186578|gb|EEI66649.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri CF48-3A]
 gi|300892741|gb|EFK86101.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri SD2112]
          Length = 636

 Score = 35.9 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISI 51
            +++  L  +  ++E  M+E+     Y K+ +    ++ I  KI  
Sbjct: 579 DEELDALDQQHQQLENEMAEAA--SDYTKIAKLQKQLNEIQEKIDE 622


>gi|313236155|emb|CBY11479.1| unnamed protein product [Oikopleura dioica]
          Length = 262

 Score = 35.9 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIG 67
           Q+  L+ + A++  ++S+   V  Y K  +E A +  +  +I    +  QE + L  +  
Sbjct: 199 QLQVLEEKRAQLRAQLSDRNWVTDYDK--KE-AKLKELNKEIRELKKINQEVERL--IAS 253

Query: 68  DHNSDSEIR 76
           + +SD  ++
Sbjct: 254 ESSSDKSVK 262


>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
           [Acromyrmex echinatior]
          Length = 2956

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 4   LSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
           +S  ++ +L N+  E E  +S S         ++    +SPI  K ++  Q    E++  
Sbjct: 772 ISDDKLAELINKITEYEELISPSD-------KSKNNGRLSPIEEKFNLEQQYVDLEEEFE 824

Query: 64  TVIGDHNSDSEIRD 77
                  +D   +D
Sbjct: 825 KWKIKIENDISQKD 838


>gi|300214576|gb|ADJ78992.1| Chaperone [Lactobacillus salivarius CECT 5713]
          Length = 863

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 8/113 (7%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K R  E++  +S     +   K  +           I     KK E       + +  ++
Sbjct: 440 KKRLEELQAELS-----NLREKANKLRQRWEDEKLDIQKVSDKKSELDKARHQLEEAENN 494

Query: 73  SEIRDL---AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++          +  +EKE+++LEN         +       I E+ +   G
Sbjct: 495 YDLEKAAKLQHATIPQLEKELQQLENSERPKEWMVEESVTDKEIAEVISRMTG 547


>gi|258568904|ref|XP_002585196.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237906642|gb|EEP81043.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 2299

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 2    VFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQD 61
            + +   Q+   + R  E+E  +S     DA  K+          I+ +      +    D
Sbjct: 2032 IMVLQDQLQQREGRIEELEHELSLIDK-DAPAKI----KERETEITWLRELLHVR--LDD 2084

Query: 62   LHTVI 66
            L  +I
Sbjct: 2085 LQDII 2089


>gi|227890865|ref|ZP_04008670.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
           salivarius ATCC 11741]
 gi|227867274|gb|EEJ74695.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
           salivarius ATCC 11741]
          Length = 863

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 8/113 (7%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K R  E++  +S     +   K  +           I     KK E       + +  ++
Sbjct: 440 KKRLEELQAELS-----NLREKANKLRQRWEDEKLDIQKVSDKKSELDKARHQLEEAENN 494

Query: 73  SEIRDL---AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++          +  +EKE+++LEN         +       I E+ +   G
Sbjct: 495 YDLEKAAKLQHATIPQLEKELQQLENSERPKEWMVEESVTDKEIAEVISRMTG 547


>gi|187951929|gb|AAI38367.1| Myo18a protein [Mus musculus]
          Length = 2047

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 6/86 (6%), Positives = 26/86 (30%), Gaps = 1/86 (1%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEY-AAISPIISKISIYDQKKQEEQDLHT 64
             +++  L+++   +E  M +   V        E    +    +++   +      ++   
Sbjct: 1802 QEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFEKTQVKRLENLASRLKETME 1861

Query: 65   VIGDHNSDSEIRDLAQIEVLAIEKEI 90
             + +        +  + E     +  
Sbjct: 1862 KLTEERDQRAAAENREKEQNKRLQRQ 1887


>gi|22094119|ref|NP_035716.1| myosin-XVIIIa [Mus musculus]
 gi|7416032|dbj|BAA93660.1| myosin containing PDZ domain [Mus musculus]
 gi|56205923|emb|CAI24425.1| myosin XVIIIa [Mus musculus]
 gi|148680948|gb|EDL12895.1| myosin XVIIIa [Mus musculus]
          Length = 2035

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 6/86 (6%), Positives = 26/86 (30%), Gaps = 1/86 (1%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEY-AAISPIISKISIYDQKKQEEQDLHT 64
             +++  L+++   +E  M +   V        E    +    +++   +      ++   
Sbjct: 1790 QEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFEKTQVKRLENLASRLKETME 1849

Query: 65   VIGDHNSDSEIRDLAQIEVLAIEKEI 90
             + +        +  + E     +  
Sbjct: 1850 KLTEERDQRAAAENREKEQNKRLQRQ 1875


>gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
 gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
 gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
 gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
 gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 171

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE 281
               G GGQ +N T+S V++THIPTG++V   + +SQ QNR  A + L  +L D  
Sbjct: 46  HGGRGPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDDFY 101


>gi|321477811|gb|EFX88769.1| hypothetical protein DAPPUDRAFT_304777 [Daphnia pulex]
          Length = 450

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 42/112 (37%), Gaps = 4/112 (3%)

Query: 1   MVFLSHKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ 60
           M   + +QI DL+ R   +E  ++ S       +L +E +++   +  +    Q  Q++ 
Sbjct: 109 MKSSASQQILDLQKRVHSVEAELALSNG--KAQELAKEKSSLENQLGSLRHQLQASQDKS 166

Query: 61  D--LHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDK 110
           +  +  +I D     +            +    ++ N  + L     + + +
Sbjct: 167 EKTIRMLIADKEELEKSTKKLTETTAKWKSTHEQMCNRNSALNSSVASSNQQ 218


>gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum DSM
           4136]
          Length = 141

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 209 EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRL 267
               + + I  ED+    +R +G+GGQ +N T S V +TH+PTG+ V    E+SQ  NR+
Sbjct: 16  HQRMLKLGIREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPTGLEVRCQRERSQSLNRV 75

Query: 268 RAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
            A + L ++L     +         R+ ++    R  R R 
Sbjct: 76  VAREELCSKL-----EERLAAVKLERRNEVEKKKRQNRKRP 111


>gi|150004575|ref|YP_001299319.1| ABC transporter ATP-binding protein [Bacteroides vulgatus ATCC
           8482]
 gi|149932999|gb|ABR39697.1| ABC transporter ATP-binding protein [Bacteroides vulgatus ATCC
           8482]
          Length = 647

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 19/58 (32%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLH 63
            ++I  L+    E+E  M+            +       +   +  ++    E +++ 
Sbjct: 588 EQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTVEEWETVSMELEEMQ 645


>gi|154249899|ref|YP_001410724.1| chromosome segregation protein SMC [Fervidobacterium nodosum Rt17-B1]
 gi|154153835|gb|ABS61067.1| chromosome segregation protein SMC [Fervidobacterium nodosum Rt17-B1]
          Length = 1164

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 32/68 (47%), Gaps = 8/68 (11%)

Query: 2    VFLSHKQICDLKNRFAEIELRM-----SESPSVDAYIKLTEEYAAISPIISKISIYDQKK 56
            + +  +++ +L N   ++E ++      +  ++D Y  + +EY  +   + +    +  K
Sbjct: 943  IDVEPEKLDELANEIKDLENKLKMLGAVDLTAIDEYKAIEQEYNEL---LKQKQDLEDAK 999

Query: 57   QEEQDLHT 64
            ++ ++L  
Sbjct: 1000 KKLEELIE 1007


>gi|125987842|sp|Q9JMH9|MY18A_MOUSE RecName: Full=Myosin-XVIIIa; AltName: Full=Molecule associated with
            JAK3 N-terminus; Short=MAJN; AltName: Full=Myosin
            containing a PDZ domain
 gi|56205924|emb|CAI24426.1| myosin XVIIIa [Mus musculus]
          Length = 2050

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 6/86 (6%), Positives = 26/86 (30%), Gaps = 1/86 (1%)

Query: 6    HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEY-AAISPIISKISIYDQKKQEEQDLHT 64
             +++  L+++   +E  M +   V        E    +    +++   +      ++   
Sbjct: 1790 QEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFEKTQVKRLENLASRLKETME 1849

Query: 65   VIGDHNSDSEIRDLAQIEVLAIEKEI 90
             + +        +  + E     +  
Sbjct: 1850 KLTEERDQRAAAENREKEQNKRLQRQ 1875


>gi|293610229|ref|ZP_06692530.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827461|gb|EFF85825.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 640

 Score = 35.9 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 9   ICDLKNRFAEIELRMSESP----SVDAYIKLTEEYAAISPI-ISKISIYDQKKQ 57
           I  L+   AE+  ++++      + D   K ++  A I  + + K+  +D+ +Q
Sbjct: 582 IEKLEVEQAELSDKLADGSWFVSNADEATKASQRLAEIEEVLLEKLERWDELEQ 635


>gi|307150658|ref|YP_003886042.1| hypothetical protein Cyan7822_0738 [Cyanothece sp. PCC 7822]
 gi|306980886|gb|ADN12767.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
          Length = 255

 Score = 35.9 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 35/90 (38%), Gaps = 16/90 (17%)

Query: 5   SHKQICDLKNRFAEIEL---------RMSESPSV--DAYIKLTEEYAAISPIISKISIYD 53
             + + +L++RF ++E           ++   S       K+ +    ++ +I+ +  ++
Sbjct: 155 PREDVIELRSRFNQLEETVKELQDKLDLNNPDSWSTKQEQKIQKLRQDLASLIANLEQFE 214

Query: 54  -----QKKQEEQDLHTVIGDHNSDSEIRDL 78
                Q +Q  ++  + I     DS+    
Sbjct: 215 ARNKAQHEQLSREAKSAIAQLTEDSQFLAH 244


>gi|109896443|ref|YP_659698.1| ABC transporter related [Pseudoalteromonas atlantica T6c]
 gi|109698724|gb|ABG38644.1| ABC transporter related protein [Pseudoalteromonas atlantica T6c]
          Length = 650

 Score = 35.9 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 9/75 (12%)

Query: 6   HKQICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQ----D 61
            K++ +L+ +   IE +M++    +A  K     A +  +++  +     ++E +    D
Sbjct: 578 EKKMAELEAKLEGIEQKMADPDIYNADKK-----AELKVLLADQASCKVAQEEAEMLWLD 632

Query: 62  LHTVIGDHNSDSEIR 76
               I    ++ + +
Sbjct: 633 AQEQIEAKQAEFDAQ 647


>gi|332360706|gb|EGJ38515.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis SK49]
          Length = 622

 Score = 35.9 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 8   QICDLKNRFAEIELRMSESPSVDAYIKLTEEYAAI----SPIISKISIYD 53
            I  L+ R +EIE  M E+     + +L+E    +      ++ K   Y+
Sbjct: 568 DIEALEERISEIEAAMQENG--SDFARLSELQQELDEQNEKLLEKYERYE 615


>gi|123427723|ref|XP_001307315.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121888937|gb|EAX94385.1| conserved hypothetical protein [Trichomonas vaginalis G3]
          Length = 578

 Score = 35.9 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 36/74 (48%), Gaps = 16/74 (21%)

Query: 7   KQICDLKNRFAEIELRMSESP----SVDAYIKL----TEEYAAIS--------PIISKIS 50
           K++ DL+ R+ ++ +++SE+P      D Y+ L     +E   +         P+ +++ 
Sbjct: 198 KKVQDLEKRYDDLLVKLSENPQQREFYDKYMSLQHQYMQERTELEQRLNKEVAPLKAQVD 257

Query: 51  IYDQKKQEEQDLHT 64
            Y Q+  +E++   
Sbjct: 258 SYVQQLNQEKEAQK 271


>gi|90961840|ref|YP_535756.1| chaperone [Lactobacillus salivarius UCC118]
 gi|90821034|gb|ABD99673.1| Chaperone [Lactobacillus salivarius UCC118]
          Length = 863

 Score = 35.9 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 8/113 (7%)

Query: 13  KNRFAEIELRMSESPSVDAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSD 72
           K R  E++  +S     +   K  +           I     KK E       + +  ++
Sbjct: 440 KKRLEELQAELS-----NLREKANKLRQRWEDEKLDIQKVSDKKSELDKARHQLEEAENN 494

Query: 73  SEIRDL---AQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGG 122
            ++          +  +EKE+++LEN         +       I E+ +   G
Sbjct: 495 YDLEKAAKLQHATIPQLEKELQQLENSERPKEWMVEESVTDKEIAEVISRMTG 547


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.314    0.122    0.330 

Lambda     K      H
   0.267   0.0374    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,532,622,837
Number of Sequences: 14124377
Number of extensions: 125101271
Number of successful extensions: 706067
Number of sequences better than 10.0: 8545
Number of HSP's better than 10.0 without gapping: 5074
Number of HSP's successfully gapped in prelim test: 3471
Number of HSP's that attempted gapping in prelim test: 668114
Number of HSP's gapped (non-prelim): 21477
length of query: 357
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 217
effective length of database: 2,865,380,850
effective search space: 621787644450
effective search space used: 621787644450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.9 bits)