RPSBLAST alignment of GI: 254780874 and protein with PDBid: 1rq0
>1rq0_A RF-1, peptide chain release factor 1; X-RAY, crystal, peptide release factor 1, ribosome, structural genomics, BSGC structure funded by NIH; 2.65A {Thermotoga maritima} SCOP: e.38.1.1 PDB: 2fvo_A Length = 342
Score = 229 bits (584), Expect = 1e-60
Identities = 151/344 (43%), Positives = 218/344 (63%), Gaps = 18/344 (5%)
Query: 12 LKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
+K + EIE ++ P + + EYA I I + I ++ K+ ++ + + +
Sbjct: 1 MKEKKKEIEKLLA-RPDLTPEQMKNYGMEYAKIEEIEN---ITNRIKETQEFIELLREEG 56
Query: 70 NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
++ EI EKE+ +L E+ + I+EIR GTGG EAALF
Sbjct: 57 ENELEIEKY--------EKELDQLYQELL---FLLSPEASDKAIVEIRPGTGGEEAALFA 105
Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
DLFRMY RYA + W +EV + D GG +E+V + G+ + +K+ESGVHRVQRVP
Sbjct: 106 RDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVP 165
Query: 190 ATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
TE+ GR+HTS ATVAVLPE E D++I ED++I+T RASG GGQ+VN T+SAVRITH+
Sbjct: 166 VTESGGRIHTSTATVAVLPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHL 225
Query: 250 PTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
PTGI + +E+SQ+QN+ A+++LRARLY +++++ E S RK QIG+G+RSE+IRT
Sbjct: 226 PTGIVVSCQNERSQYQNKQTALRILRARLYQLQKEQKEREISQKRKSQIGTGERSEKIRT 285
Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
YNF Q R+TDHRIN T Y+L+ +L G +D+II+ L+ +
Sbjct: 286 YNFPQNRVTDHRINYTSYRLQEILDGDLDEIISKLIEHDIENNL 329