HHsearch alignment for GI: 254780875 and conserved domain: COG0286
>COG0286 HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms].
Probab=98.96 E-value=5.8e-10 Score=86.02 Aligned_cols=183 Identities=20% Similarity=0.179 Sum_probs=108.4
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC----CCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 20512235655531012332110124686056642142112331222233----32100133322200244420110001
Q gi|254780875|r 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP----FFKGVGVDISCKALEIAKSNAVTNGV 146 (264)
Q Consensus 71 vLIPRpeTE~lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~----~~~v~~~Dis~~al~~A~~N~~~~~~ 146 (264)
T Consensus 168 fyTP~~v~~liv~~l~~--------~~~~~i~DpacGsgg~l~~a~~~~~~~~~~~~~yGqE~~~~t~~l~~mN~~lhgi 239 (489)
T COG0286 168 FYTPREVSELIVELLDP--------EPRNSIYDPACGSGGMLLQAAKYLKRHQDEIFIYGQEINDTTYRLAKMNLILHGI 239 (489)
T ss_pred CCCHHHHHHHHHHHCCC--------CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCC
T ss_conf 05879999999997577--------6565234733540379999999997515550499895668899999961166278
Q ss_pred CCCCCCCCCCCCCC-------CCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHCC
Q ss_conf 22222222222222-------21002333201133321001221111123575433210-11232102568999998537
Q gi|254780875|r 147 SERFDTLQSDWFSS-------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLN 218 (264)
Q Consensus 147 ~~~i~~~~~d~~~~-------~~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~g-g~dGl~~~~~ii~~~~~~L~ 218 (264)
T Consensus 240 ~~~~~i~~~dtl~~~~~~~~~~~~~~D~viaNPPf~~~~w~~~~~~~-~~~-~~~~~~g~~~~~~~~d~afi~h~~~~l~ 317 (489)
T COG0286 240 EGDANIRHGDTLSNPKHDDKDDKGKFDFVIANPPFSGKGWGGDLLES-EQD-ERFFFYGVFPTKNSADLAFLQHILYKLK 317 (489)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCC-CHHCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 74223433442368733234665550168657995544434433100-243-2000257788895278999999999718
Q ss_pred CCCEEEEEECC------CHHHHHHHHHHHCCCCEEEEE---EC--CCCCCEEEEEE
Q ss_conf 88789998176------679999999997898058998---05--68997599997
Q gi|254780875|r 219 KDGLCSVEIGY------NQKVDVVRIFESRKLFLVNAF---KD--YGGNDRVLLFC 263 (264)
Q Consensus 219 ~~G~l~lEig~------~q~~~v~~ll~~~gf~~v~~~---kD--~~g~~R~vi~~ 263 (264)
T Consensus 318 ~~g~aaivl~~gvlfr~~~e~~IR~~l~~~~~~~~ii~lp~~lF~~tgi~~~Il~l 373 (489)
T COG0286 318 PGGRAAIVLPDGVLFRGGAEKDIRKDLLEDNLLEAIIGLPTGLFYNTGIPTNILFL 373 (489)
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 67705899258866277722579999875031335342686420357776089996