HHsearch alignment for GI: 254780875 and conserved domain: KOG2940
>KOG2940 consensus.
Probab=97.09 E-value=0.00036 Score=47.89 Aligned_cols=148 Identities=18% Similarity=0.175 Sum_probs=79.0
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHCCH
Q ss_conf 4686056642142112331222233321001333222002444201100012222222222--22222100233320113
Q gi|254780875|r 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVSNPP 173 (264)
Q Consensus 96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d--~~~~~~~~fD~IvsNPP 173 (264)
T Consensus 71 k~fp~a~diGcs~G~v~rhl~~e~-vekli~~DtS~~M~~s~~~-~qdp~i~~--~~~v~DEE~Ldf~ens~DLiisSls 146 (325)
T KOG2940 71 KSFPTAFDIGCSLGAVKRHLRGEG-VEKLIMMDTSYDMIKSCRD-AQDPSIET--SYFVGDEEFLDFKENSVDLIISSLS 146 (325)
T ss_pred HHCCCEEECCCCHHHHHHHHHHCC-HHHEEEEECCHHHHHHHHC-CCCCCEEE--EEEECCHHCCCCCCCCHHHHHHHHH
T ss_conf 607520440655446568877525-1340664041679997532-68985379--9972551015655350111265433
Q ss_pred HHHHHCCCCCCCCCCC-------CCCCC-CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCC
Q ss_conf 3321001221111123-------57543-321011232102568999998537887899981766799999999978980
Q gi|254780875|r 174 YIESVIVDCLGLEVRD-------FDPRI-SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 (264)
Q Consensus 174 YI~~~~~~~l~~~v~~-------~EP~~-AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q~~~v~~ll~~~gf~ 245 (264)
T Consensus 147 ---lHW~NdLPg~m~~ck~~lKPDg~Fiasmlggd-TLyELR~-slqLAelER~GGiSphiSPf~qvrDiG~LL~rAGF~ 221 (325)
T KOG2940 147 ---LHWTNDLPGSMIQCKLALKPDGLFIASMLGGD-TLYELRC-SLQLAELEREGGISPHISPFTQVRDIGNLLTRAGFS 221 (325)
T ss_pred ---HHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCC-CHHHHHH-HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf ---45640483689998874289751216775644-0999998-763898875169887767046655666577644766
Q ss_pred EEEEEEC
Q ss_conf 5899805
Q gi|254780875|r 246 LVNAFKD 252 (264)
Q Consensus 246 ~v~~~kD 252 (264)
T Consensus 222 m~tvDtD 228 (325)
T KOG2940 222 MLTVDTD 228 (325)
T ss_pred CCEECCC
T ss_conf 4000320