HHsearch alignment for GI: 254780875 and conserved domain: KOG3420
>KOG3420 consensus.
Probab=98.68 E-value=2e-09 Score=82.46 Aligned_cols=79 Identities=34% Similarity=0.451 Sum_probs=64.4
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHC
Q ss_conf 12468605664214211233122223332100133322200244420110001222222222222222--1002333201
Q gi|254780875|r 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSN 171 (264)
Q Consensus 94 ~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~~--~~~fD~IvsN 171 (264)
T Consensus 45 gdiEgkkl~DLgcgcGmLs~a-~sm~~~e~vlGfDIdpeALEIf~rNaeEfEvq--idlLqcdildle~~~g~fDtaviN 121 (185)
T KOG3420 45 GDIEGKKLKDLGCGCGMLSIA-FSMPKNESVLGFDIDPEALEIFTRNAEEFEVQ--IDLLQCDILDLELKGGIFDTAVIN 121 (185)
T ss_pred CCCCCCCHHHHCCCHHHHHHH-HHCCCCCEEEEEECCHHHHHHHHHCHHHHHHH--HHEEEEECCCHHCCCCEEEEEEEC
T ss_conf 120474622524761156777-50578733786405889999986166875233--421222215511058767667866
Q ss_pred CHHH
Q ss_conf 1333
Q gi|254780875|r 172 PPYI 175 (264)
Q Consensus 172 PPYI 175 (264)
T Consensus 122 ppFG 125 (185)
T KOG3420 122 PPFG 125 (185)
T ss_pred CCCC
T ss_conf 8987