HHsearch alignment for GI: 254780875 and conserved domain: PRK00216

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed.
Probab=99.64  E-value=9.2e-16  Score=124.17  Aligned_cols=144  Identities=21%  Similarity=0.269  Sum_probs=113.0

Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHC
Q ss_conf             2468605664214211233122223-33210013332220024442011000122222222222222--21002333201
Q gi|254780875|r   95 KRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSN  171 (264)
Q Consensus        95 ~~~~~~vLDlG~GsG~i~i~la~~~-~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~--~~~~fD~IvsN  171 (264)
T Consensus        49 ~~~g~~vLDvgcGTG~~~~~l~~~~~~~~~v~g~D~S~~ML~~A~~k~~~~~~~~~i~~~~~da~~lpf~d~sfD~v~~~  128 (239)
T PRK00216         49 VRPGDKVLDLACGTGDLAIALAKAVGETGEVVGLDFSEGMLAVGREKLLDKGLSGNVEFVQGDAEALPFPDNSFDAVTIA  128 (239)
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             89999898845776387999999729976799991988999999999997389888507982355688876667650026


Q ss_pred             CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE-EEEC----------------------
Q ss_conf             13332100122111112357543321011232102568999998537887899-9817----------------------
Q gi|254780875|r  172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIG----------------------  228 (264)
Q Consensus       172 PPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~-lEig----------------------  228 (264)
T Consensus       129 --f----~l-------~~~-------------~d~~~~l~E~~RVLkPGG~l~ilefs~p~~~~~~~~y~~Y~~~ilP~i  182 (239)
T PRK00216        129 --F----GL-------RNV-------------PDIDKALREMYRVLKPGGRLVILEFSKPTNPPLKKAYDFYLFKVLPLI  182 (239)
T ss_pred             --C----EE-------EEC-------------CCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             --1----56-------714-------------867999999998766480899997589997688999999999999999


Q ss_pred             --------------------CCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEC
Q ss_conf             --------------------667999999999789805899805689975999979
Q gi|254780875|r  229 --------------------YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR  264 (264)
Q Consensus       229 --------------------~~q~~~v~~ll~~~gf~~v~~~kD~~g~~R~vi~~r  264 (264)
T Consensus       183 g~~~~~~~~aY~YL~~Si~~fp~~~~~~~~l~~aGF~~v~~~~l~~Gi~~i~~~~K  238 (239)
T PRK00216        183 GKLVSKNAEAYRYLAESIRAFPDQEELAAMMEEAGFERVKYRNLTGGIVALHVGYK  238 (239)
T ss_pred             HHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEC
T ss_conf             99971987888769999998889999999999879967889987887699999989