HHsearch alignment for GI: 254780875 and conserved domain: PRK00517
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed.
Probab=99.72 E-value=1.2e-17 Score=136.67 Aligned_cols=125 Identities=26% Similarity=0.319 Sum_probs=100.0
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHH
Q ss_conf 46860566421421123312222333210013332220024442011000122222222222222210023332011333
Q gi|254780875|r 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 (264)
Q Consensus 96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~~~~~fD~IvsNPPYI 175 (264)
T Consensus 161 ~~~~~vLDvG~GSGILaIaA~k-lGa~~v~a~DiD~~Av~~a~eN~~lN~v~~~~~~~~~~~-~~~~~~~DlvvAN---I 235 (298)
T PRK00517 161 LPGKTVLDVGCGSGILAIAAAK-LGAKPVLAIDIDPQAVEAARENAELNGVDDRLELYLPED-QPLEGKADVIVAN---I 235 (298)
T ss_pred CCCCEEEEECCCCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCC-CCCCCCCCEEEEE---C
T ss_conf 4688688715770699999997-499849999898999999999999869984268961664-3446764689973---1
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE-ECCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 210012211111235754332101123210256899999853788789998-1766799999999978980589980
Q gi|254780875|r 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLFLVNAFK 251 (264)
Q Consensus 176 ~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lE-ig~~q~~~v~~ll~~~gf~~v~~~k 251 (264)
T Consensus 236 la~--------------------------vl~~l~~~~~~~l~~~G~lilSGIl~~~~~~v~~~~~~~g~~~~~~~~ 286 (298)
T PRK00517 236 LAN--------------------------PLIELAPDLAALVKPGGRLILSGILAEQADEVLEAYEDAGFTLDEVAE 286 (298)
T ss_pred CHH--------------------------HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 589--------------------------999999999997389979999278488999999999987998978860