HHsearch alignment for GI: 254780875 and conserved domain: PRK00517

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed.
Probab=99.72  E-value=1.2e-17  Score=136.67  Aligned_cols=125  Identities=26%  Similarity=0.319  Sum_probs=100.0

Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHH
Q ss_conf             46860566421421123312222333210013332220024442011000122222222222222210023332011333
Q gi|254780875|r   96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI  175 (264)
Q Consensus        96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~~~~~fD~IvsNPPYI  175 (264)
T Consensus       161 ~~~~~vLDvG~GSGILaIaA~k-lGa~~v~a~DiD~~Av~~a~eN~~lN~v~~~~~~~~~~~-~~~~~~~DlvvAN---I  235 (298)
T PRK00517        161 LPGKTVLDVGCGSGILAIAAAK-LGAKPVLAIDIDPQAVEAARENAELNGVDDRLELYLPED-QPLEGKADVIVAN---I  235 (298)
T ss_pred             CCCCEEEEECCCCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCC-CCCCCCCCEEEEE---C
T ss_conf             4688688715770699999997-499849999898999999999999869984268961664-3446764689973---1


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE-ECCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             210012211111235754332101123210256899999853788789998-1766799999999978980589980
Q gi|254780875|r  176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLFLVNAFK  251 (264)
Q Consensus       176 ~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lE-ig~~q~~~v~~ll~~~gf~~v~~~k  251 (264)
T Consensus       236 la~--------------------------vl~~l~~~~~~~l~~~G~lilSGIl~~~~~~v~~~~~~~g~~~~~~~~  286 (298)
T PRK00517        236 LAN--------------------------PLIELAPDLAALVKPGGRLILSGILAEQADEVLEAYEDAGFTLDEVAE  286 (298)
T ss_pred             CHH--------------------------HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             589--------------------------999999999997389979999278488999999999987998978860