HHsearch alignment for GI: 254780875 and conserved domain: PRK11036

Probab=99.41  E-value=1.5e-13  Score=109.52  Aligned_cols=132  Identities=23%  Similarity=0.320  Sum_probs=102.3

Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCCHHHHHHHCC
Q ss_conf             4686056642142112331222233321001333222002444201100012222222222222---2210023332011
Q gi|254780875|r   96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNP  172 (264)
Q Consensus        96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~---~~~~~fD~IvsNP  172 (264)
T Consensus        43 ~~plrVLDvG~G~G~~a~~lA~~--Gh~Vt~~D~S~~mL~~A~~~a~~~gv~~~~~~v~~~~q~l~~~~~~~fDlVlcH-  119 (256)
T PRK11036         43 PRPLRVLDAGGGEGQTAIKMAEL--GHQVTLCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFH-  119 (256)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHC--CCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCEEEEE-
T ss_conf             99983998379877989999977--997998669999999999998864966127988568998854236886678651-


Q ss_pred             HHHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEC----------------------
Q ss_conf             333210012211111235--75433210112321025689999985378878999817----------------------
Q gi|254780875|r  173 PYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG----------------------  228 (264)
Q Consensus       173 PYI~~~~~~~l~~~v~~~--EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig----------------------  228 (264)
T Consensus       120 -----a--------VLE~v~dP~--------------~~l~~l~~~lkPGG~lSLmfyN~~alv~~n~l~Gnf~~a~~~~  172 (256)
T PRK11036        120 -----A--------VLEWVADPK--------------SVLQTLWSVLRPGGALSLMFYNANGLLMHNMVAGNFDYVQAGM  172 (256)
T ss_pred             -----H--------HHHHCCCHH--------------HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHC
T ss_conf             -----3--------677237899--------------9999999975899379998428516999999825899997306


Q ss_pred             ------------CCHHHHHHHHHHHCCCCE-----EEEEECCCCCC
Q ss_conf             ------------667999999999789805-----89980568997
Q gi|254780875|r  229 ------------YNQKVDVVRIFESRKLFL-----VNAFKDYGGND  257 (264)
Q Consensus       229 ------------~~q~~~v~~ll~~~gf~~-----v~~~kD~~g~~  257 (264)
T Consensus       173 ~~~~~~~LtP~~p~~p~~V~~~l~~~g~~i~~~~GIRvF~Dy~~~~  218 (256)
T PRK11036        173 PKRKKRTLSPQYPRDPAQVYQWLEEAGWQIMGKTGVRVFHDYLRNK  218 (256)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEEECCCCC
T ss_conf             3445521689999999999999997798277667899976056775