HHsearch alignment for GI: 254780875 and conserved domain: PRK11088

Probab=98.44  E-value=2e-07  Score=69.27  Aligned_cols=107  Identities=21%  Similarity=0.278  Sum_probs=70.0

Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCC---CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHH
Q ss_conf             4686056642142112331222233---321001333222002444201100012222222222222--22100233320
Q gi|254780875|r   96 RDVVRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVS  170 (264)
Q Consensus        96 ~~~~~vLDlG~GsG~i~i~la~~~~---~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~--~~~~~fD~Ivs  170 (264)
T Consensus        84 ~~~~~ilD~GCGEGyYl~~l~~~l~~~~~~~~~G~DiSK~ai~~Aak~~------~~~~~~Va~~~~lP~~d~s~D~vl~  157 (272)
T PRK11088         84 EKATAILDIGCGEGYYTHALADALPEVTTCQLFGLDISKVAIKYAAKRY------PQVTFCVASSHRLPFADQSLDAIIR  157 (272)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCC------CCCEEEEEECCCCCCCCCCCEEEEE
T ss_conf             7786488815877789999999741157873799811799999996268------8854999610018887665408999


Q ss_pred             CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE-CCCHHHHHHHHHHH
Q ss_conf             113332100122111112357543321011232102568999998537887899981-76679999999997
Q gi|254780875|r  171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFES  241 (264)
Q Consensus       171 NPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEi-g~~q~~~v~~ll~~  241 (264)
T Consensus       158 v------------------FsP~~---------------~~Ef~RvLkp~G~li~V~P~~~HL~eLre~lY~  196 (272)
T PRK11088        158 I------------------YAPCK---------------AEELARVVKPGGIVITVTPGPRHLFELKGLIYD  196 (272)
T ss_pred             E------------------ECCCC---------------HHHHHHEECCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             8------------------43788---------------588612463797899997888899999999751