HHsearch alignment for GI: 254780875 and conserved domain: PTZ00146
>PTZ00146 fibrillarin; Provisional.
Probab=95.69 E-value=0.031 Score=35.19 Aligned_cols=134 Identities=19% Similarity=0.195 Sum_probs=76.4
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCC----HHHHHHCCCCCCCCCCCCCCCCCCCCC-----C
Q ss_conf 1012468605664214211233122223-33210013332220----024442011000122222222222222-----2
Q gi|254780875|r 92 RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSS-----V 161 (264)
Q Consensus 92 ~~~~~~~~~vLDlG~GsG~i~i~la~~~-~~~~v~~~Dis~~a----l~~A~~N~~~~~~~~~i~~~~~d~~~~-----~ 161 (264)
T Consensus 130 ~i~Ik~GskVLYLGAasGTTVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~~R-------~NIvPIleDAr~P~kYr~l 202 (296)
T PTZ00146 130 SIPIKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAKRR-------TNIVPIIEDARYPQKYRML 202 (296)
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCC-------CCCEEEECCCCCHHHHHHH
T ss_conf 444379998998514679865566650178861999970646688999997227-------9833577778974675542
Q ss_pred CCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCH----------
Q ss_conf 1002333201133321001221111123575433210112321025689999985378878999817667----------
Q gi|254780875|r 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---------- 231 (264)
Q Consensus 162 ~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q---------- 231 (264)
T Consensus 203 V~~VDvIf~D---------------VAQ--pdQa-----------rI~~~Na~~FLK~gG~~~i~IKArsIDst~~p~~V 254 (296)
T PTZ00146 203 VPMVDCIFAD---------------VAQ--PDQA-----------RIVALNAQHFLKNGGHFVISIKANCIDSTADPEVV 254 (296)
T ss_pred CCCCCEEEEC---------------CCC--HHHH-----------HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHH
T ss_conf 4555589961---------------787--6589-----------99999999853169889999972663256798999
Q ss_pred HHHHHHHHHHCCCCEEEEE-ECCCCCCEEE
Q ss_conf 9999999997898058998-0568997599
Q gi|254780875|r 232 KVDVVRIFESRKLFLVNAF-KDYGGNDRVL 260 (264)
Q Consensus 232 ~~~v~~ll~~~gf~~v~~~-kD~~g~~R~v 260 (264)
T Consensus 255 F~~Ev~kL~~~~f~~~e~v~LePy~rdHa~ 284 (296)
T PTZ00146 255 FASEVQKLKKEGLKPKEQLTLEPFERDHAV 284 (296)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCEE
T ss_conf 999999998728963688704777788289