HHsearch alignment for GI: 254780875 and conserved domain: TIGR02987
>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family; InterPro: IPR014329 Members of this entry are the m6-adenine DNA methyltransferase protein, or a fusion protein that also carries m5 cytosine methyltransferase activity of type II restriction systems of the Alw26I/Eco31I/Esp3I family. A type II restriction endonuclease always accompanies a methyltransferase of this type from Alw26I/Eco31I/Esp3I(IPR014328 from INTERPRO) and by an adenine-specific modification methyltransferase. Members of this are unusual in that the regions of similarity to homologues outside this family are circularly permuted..
Probab=98.60 E-value=4.6e-08 Score=73.50 Aligned_cols=178 Identities=20% Similarity=0.230 Sum_probs=105.8
Q ss_pred HHHHHHHHCCCCCCCCC-CCCCCCEEEEECCCCCCCCCCCCCCCC------------CCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 56555310123321101-246860566421421123312222333------------21001333222002444201100
Q gi|254780875|r 78 TELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPF------------FKGVGVDISCKALEIAKSNAVTN 144 (264)
Q Consensus 78 TE~lv~~~l~~~~~~~~-~~~~~~vLDlG~GsG~i~i~la~~~~~------------~~v~~~Dis~~al~~A~~N~~~~ 144 (264)
T Consensus 13 ~~~m~~~l~~~~~~~~~~nI~~~~~~DP~~G~G~Li~~~L~~~~~i~~~~~~i~~~~~~~~~~Di~~~~L~~~~~~~~~~ 92 (603)
T TIGR02987 13 AKEMVKELVKEIDKNDKSNIEKLKIIDPCCGDGRLIALLLKKFEEINLFKEQIEKVELNIYLADIDKTLLERASKLLSEL 92 (603)
T ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99999999875176530004154533575276499999999866430340232331110002314447999999988787
Q ss_pred C-------CCCCCCCCCCCCCCCC---CCH-----------------HHHHHHCCHHH----HHHCCCCCCCC-------
Q ss_conf 0-------1222222222222222---100-----------------23332011333----21001221111-------
Q gi|254780875|r 145 G-------VSERFDTLQSDWFSSV---EGL-----------------FDVIVSNPPYI----ESVIVDCLGLE------- 186 (264)
Q Consensus 145 ~-------~~~~i~~~~~d~~~~~---~~~-----------------fD~IvsNPPYI----~~~~~~~l~~~------- 186 (264)
T Consensus 93 ~k~~F~~~~~~~~~~~~~~~~~~~~~~~~~EYI~~~~~F~~EV~keGFD~~ItNPPy~~~K~dk~~~~n~~~~~~~~~~~ 172 (603)
T TIGR02987 93 AKLLFALEISIILTNSLSDVFLLIEEYKEKEYIKLEDVFGDEVKKEGFDIVITNPPYKNLKPDKKELSNLETLEKESYKD 172 (603)
T ss_pred HHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 66654237751001102344454554201022254501553200157417997788855444510001468255444537
Q ss_pred --------C-CCCCCCC-----CCCCCCCCCCCHHHHHHH-HHHHCCCCCEEEEEE-----CCCHHHHHHHHHHHC-CCC
Q ss_conf --------1-2357543-----321011232102568999-998537887899981-----766799999999978-980
Q gi|254780875|r 187 --------V-RDFDPRI-----SLDGGIDGLSHYRTIADG-VSRHLNKDGLCSVEI-----GYNQKVDVVRIFESR-KLF 245 (264)
Q Consensus 187 --------v-~~~EP~~-----AL~gg~dGl~~~~~ii~~-~~~~L~~~G~l~lEi-----g~~q~~~v~~ll~~~-gf~ 245 (264)
T Consensus 173 ~~~~~~~~~~~~~~~S~p~kKf~g~g~~~G~~~ysr~~~~~~~~~~~~~G~v~i~~P~S~l~D~~~~~LR~~~~~n~~I~ 252 (603)
T TIGR02987 173 SLKELDDFLSRVFPYSDPRKKFAGVGTEKGILNYSRVGEEISLELVKKNGLVSIVIPSSILADKTSENLRKYILENSNIN 252 (603)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 76412222333024210034433678667606799999999998734598799963630105234678889876146423
Q ss_pred EEEEEECCCC
Q ss_conf 5899805689
Q gi|254780875|r 246 LVNAFKDYGG 255 (264)
Q Consensus 246 ~v~~~kD~~g 255 (264)
T Consensus 253 ~I~yf~e~ak 262 (603)
T TIGR02987 253 SINYFPEEAK 262 (603)
T ss_pred CCCCCCCCCC
T ss_conf 1011012355