HHsearch alignment for GI: 254780875 and conserved domain: pfam01269

Probab=96.60  E-value=0.0098  Score=38.43  Aligned_cols=130  Identities=18%  Similarity=0.169  Sum_probs=77.0

Q ss_pred             CCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCH----HHHHHCCCCCCCCCCCCCCCCCCCCC-----CC
Q ss_conf             012468605664214211233122223-332100133322200----24442011000122222222222222-----21
Q gi|254780875|r   93 IEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKAL----EIAKSNAVTNGVSERFDTLQSDWFSS-----VE  162 (264)
Q Consensus        93 ~~~~~~~~vLDlG~GsG~i~i~la~~~-~~~~v~~~Dis~~al----~~A~~N~~~~~~~~~i~~~~~d~~~~-----~~  162 (264)
T Consensus        69 ~~i~~gskVLYLGAasGTTVSHvsDIvg~~G~VyAVE~spr~~RdL~~la~~R-------~NIvPIl~DAr~P~~Y~~lv  141 (229)
T pfam01269        69 IPIKPGSKVLYLGAASGTTVSHVSDIVGPEGVVYAVEFSPRVGRELINVAKKR-------PNIVPILEDARHPQKYRMLV  141 (229)
T ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCC-------CCCEEEECCCCCHHHHHHHC
T ss_conf             68589987999447779857678872288953999971735578999997427-------99445766778756765425


Q ss_pred             CHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC---------C-HH
Q ss_conf             0023332011333210012211111235754332101123210256899999853788789998176---------6-79
Q gi|254780875|r  163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY---------N-QK  232 (264)
Q Consensus       163 ~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~---------~-q~  232 (264)
T Consensus       142 ~~VD~ifqD---------------vaQ--~~Q-----------a~i~~~Na~~FLk~gG~~~l~iKA~Sid~t~~p~~vf  193 (229)
T pfam01269       142 EMVDVIFAD---------------VAQ--PDQ-----------ARILALNAKYFLKNGGYFMISIKARSIDVTKEPEEVF  193 (229)
T ss_pred             CCCCEEEEC---------------CCC--HHH-----------HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHH
T ss_conf             566689962---------------787--778-----------9999999998612698899999713421678989999


Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCCCE
Q ss_conf             99999999789805899805689975
Q gi|254780875|r  233 VDVVRIFESRKLFLVNAFKDYGGNDR  258 (264)
Q Consensus       233 ~~v~~ll~~~gf~~v~~~kD~~g~~R  258 (264)
T Consensus       194 ~~e~~~L~~~~~~~~e~i-~L~py~~  218 (229)
T pfam01269       194 AREVEKLKEEGFKPKEQV-TLEPYER  218 (229)
T ss_pred             HHHHHHHHHCCCCEEEEE-CCCCCCC
T ss_conf             999999987699658998-0577778