HHsearch alignment for GI: 254780875 and conserved domain: pfam02527

>pfam02527 GidB rRNA small subunit methyltransferase G. This is a family of bacterial glucose inhibited division proteins these are probably involved in the regulation of cell devision. GidB has been shown to be a methyltransferase G specific to the rRNA small subunit. Previously identified as a glucose-inhibited division protein B that appears to be present and in a single copy in all complete eubacterial genomes so far sequenced. GidB specifically methylates the N7 position of a guanosine in 16S rRNA.
Probab=98.61  E-value=9.2e-08  Score=71.51  Aligned_cols=133  Identities=16%  Similarity=0.166  Sum_probs=98.8

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHCCHHH
Q ss_conf             6860566421421123312222333210013332220024442011000122222222222222-210023332011333
Q gi|254780875|r   97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYI  175 (264)
Q Consensus        97 ~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~-~~~~fD~IvsNPPYI  175 (264)
T Consensus        48 ~~~~ilDiGSGaGfPGi~LAI~~p~~~~~LvEs~~KK~~FL~~v~~~L~L~-nv~v~~~R~E~~~~~~~~D~v~a-----  121 (184)
T pfam02527        48 IRIKVADVGSGAGFPGIPLAIAFPDKKLTLLESLLKKINFLEELKKELNLE-NVTIVHARAEEYQHEEQYDVITS-----  121 (184)
T ss_pred             CCCEEEECCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCC-CEEEEECCHHHCCCCCCCCEEEE-----
T ss_conf             798688347988846799999677855999928289999999999985999-76999560441464467878998-----


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHH---HHHHHHCCCCEEEEEEC
Q ss_conf             210012211111235754332101123210256899999853788789998176679999---99999789805899805
Q gi|254780875|r  176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV---VRIFESRKLFLVNAFKD  252 (264)
Q Consensus       176 ~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q~~~v---~~ll~~~gf~~v~~~kD  252 (264)
T Consensus       122 ------------RA~-------------a~l~~ll~~~~~~l~~~g~~i~~KG~~~~~El~~a~~~~~~l~~~~~-~v~~  175 (184)
T pfam02527       122 ------------RAV-------------ASLNELTEWALPLLKPGGYFLAYKGKQAEDEIEELDKACQKLGVEVL-FVPS  175 (184)
T ss_pred             ------------CHH-------------CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEE-ECCC
T ss_conf             ------------100-------------57999999999863889899998899989999987877998297797-6489


Q ss_pred             CCCCCEEEE
Q ss_conf             689975999
Q gi|254780875|r  253 YGGNDRVLL  261 (264)
Q Consensus       253 ~~g~~R~vi  261 (264)
T Consensus       176 ~~~~~rh~~  184 (184)
T pfam02527       176 LGAGDRHLV  184 (184)
T ss_pred             CCCCCCCCC
T ss_conf             888778779