HHsearch alignment for GI: 254780875 and conserved domain: pfam03141
>pfam03141 DUF248 Putative methyltransferase. Members of this family of hypothetical plant proteins are probably methyltransferases: several of the aligned sequences either match the methyltransferase profile, or contain a SAM-binding motif. A protein from Arabidopsis thaliana contains both. Several family members are described as ankyrin like.
Probab=95.41 E-value=0.029 Score=35.36 Aligned_cols=158 Identities=18% Similarity=0.279 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHCCCCC---CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 12235655531012332---11012468605664214211233122223332--10013332220024442011000122
Q gi|254780875|r 74 PRPETELLVDSALAFSL---PRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSE 148 (264)
Q Consensus 74 PRpeTE~lv~~~l~~~~---~~~~~~~~~~vLDlG~GsG~i~i~la~~~~~~--~v~~~Dis~~al~~A~~N~~~~~~~~ 148 (264)
T Consensus 339 f~~D~~~Wk~~V~~Y~~l~~~~i~~~~~RNVMDMnA~~GGFAAAL~~-~~vWVMNVVP~~-~~nTL~vIy----dRGL-- 410 (506)
T pfam03141 339 FKADTELWKRRVSKYKRLLKLLIDKGRVRNVMDMNAGFGGFAAALID-DPVWVMNVVPVD-SPDTLPVIY----DRGL-- 410 (506)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCC-CCEEEEEECCCC-CCCCCCEEE----ECCC--
T ss_conf 89899999999999998740225567601222124442158898637-980499835589-998754587----5442--
Q ss_pred CCCCCCCCCCCCC---CCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 2222222222222---1002333201133321001221111123575433210112321025689999985378878999
Q gi|254780875|r 149 RFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 (264)
Q Consensus 149 ~i~~~~~d~~~~~---~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~l 225 (264)
T Consensus 411 -iG-~yHDWCE~FsTYPRTYDLlHA~~l------fS~~~----------------~rC-~~~dillEMDRILRP~G~vIi 465 (506)
T pfam03141 411 -IG-IYHDWCEPFSTYPRTYDLLHADHL------FSLYK----------------KRC-NLEDILLEMDRILRPGGAVII 465 (506)
T ss_pred -CC-EEECCCCCCCCCCCCHHHHHHHHH------HHHHC----------------CCC-CHHHHHHHHHHHCCCCCEEEE
T ss_conf -10-100224557888850777735323------47761----------------786-589999888760068814999
Q ss_pred EECCCHHHHHHHHHHHCCCCEE-EEEEC-CCCCCEEEEEEC
Q ss_conf 8176679999999997898058-99805-689975999979
Q gi|254780875|r 226 EIGYNQKVDVVRIFESRKLFLV-NAFKD-YGGNDRVLLFCR 264 (264)
Q Consensus 226 Eig~~q~~~v~~ll~~~gf~~v-~~~kD-~~g~~R~vi~~r 264 (264)
T Consensus 466 RD~~~vl~~v~~i~~~m~W~~~~~d~e~g~~~~EkiL~~~K 506 (506)
T pfam03141 466 RDDVDVLDKVKKIAKAMRWEVRITDTEDGPHDPEKILIAQK 506 (506)
T ss_pred ECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEC
T ss_conf 46799999999999738640698765668998713899869