HHsearch alignment for GI: 254780875 and conserved domain: smart00138
>smart00138 MeTrc Methyltransferase, chemotaxis proteins. Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues.
Probab=98.57 E-value=2.5e-08 Score=75.29 Aligned_cols=125 Identities=22% Similarity=0.276 Sum_probs=81.5
Q ss_pred HHHHHHCCCCCCCCCCCCCCCEEEEECCCCC----CCCCCCCCC-----CCCCCCCCCCCCCCHHHHHHCCCC-------
Q ss_conf 5553101233211012468605664214211----233122223-----332100133322200244420110-------
Q gi|254780875|r 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGA----VCLALLKES-----PFFKGVGVDISCKALEIAKSNAVT------- 143 (264)
Q Consensus 80 ~lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~----i~i~la~~~-----~~~~v~~~Dis~~al~~A~~N~~~------- 143 (264)
T Consensus 82 ~l~~~ilP~l~~~~~~~~~lrIWsagCStGEE~YSlAm~l~e~~~~~~~~~~~I~aTDIs~~~L~~Ar~G~Y~~~~~~~~ 161 (264)
T smart00138 82 ALEEKVLPLLIASRRHGRRVRIWSAGCSTGEEPYSLAMLLAETLPKAREPDVKILATDIDLKALEKARAGIYPERELEDL 161 (264)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCHHHHHCC
T ss_conf 99999989999846779974899777888820899999999974334898569999839999999998689898998469
Q ss_pred -------------------CCCCCCCCCCCCCCCCCC--CCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -------------------001222222222222222--10023332011333210012211111235754332101123
Q gi|254780875|r 144 -------------------NGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 (264)
Q Consensus 144 -------------------~~~~~~i~~~~~d~~~~~--~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dG 202 (264)
T Consensus 162 ~~~~~~kyF~~~~~~~~v~~~lr~~v~F~~~NL~~~~~~~~~fDlI~C------RNVlIYF~~~~--------------- 220 (264)
T smart00138 162 PKALLARYFSRVEDKYRVKPELKERVRFAKHNLLAESPPLGDFDLIFC------RNVLIYFDEPT--------------- 220 (264)
T ss_pred CHHHHHHHCCCCCCEEEECHHHHCCCCEECCCCCCCCCCCCCCEEEEE------CCCEEECCHHH---------------
T ss_conf 999999880656988999889985091832789999877788419997------63235459999---------------
Q ss_pred CCCHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 21025689999985378878999817
Q gi|254780875|r 203 LSHYRTIADGVSRHLNKDGLCSVEIG 228 (264)
Q Consensus 203 l~~~~~ii~~~~~~L~~~G~l~lEig 228 (264)
T Consensus 221 ---~~~vl~~l~~~L~pgG~L~lG~s 243 (264)
T smart00138 221 ---QRKLLNRFAEALKPGGYLFLGHS 243 (264)
T ss_pred ---HHHHHHHHHHHHCCCCEEEEECC
T ss_conf ---99999999998389939998276